Query psy9602
Match_columns 239
No_of_seqs 167 out of 1224
Neff 5.0
Searched_HMMs 29240
Date Sat Aug 17 00:01:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9602.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9602hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cpr_A Dihydrodipicolinate syn 100.0 1.1E-34 3.8E-39 263.0 9.7 133 84-239 25-159 (304)
2 3flu_A DHDPS, dihydrodipicolin 100.0 2.2E-34 7.7E-39 259.9 9.5 129 87-239 21-150 (297)
3 1xky_A Dihydrodipicolinate syn 100.0 2.3E-34 8E-39 260.5 9.5 133 84-239 21-155 (301)
4 1f6k_A N-acetylneuraminate lya 100.0 1.8E-34 6.2E-39 259.9 8.5 132 84-239 12-147 (293)
5 3tak_A DHDPS, dihydrodipicolin 100.0 2.1E-34 7.2E-39 259.2 8.7 133 84-239 10-144 (291)
6 3eb2_A Putative dihydrodipicol 100.0 1.6E-34 5.5E-39 261.5 7.9 133 84-239 13-147 (300)
7 2ojp_A DHDPS, dihydrodipicolin 100.0 2E-34 6.7E-39 259.5 8.0 133 84-239 10-144 (292)
8 3l21_A DHDPS, dihydrodipicolin 100.0 2.9E-34 9.9E-39 260.4 9.0 133 84-239 24-158 (304)
9 3si9_A DHDPS, dihydrodipicolin 100.0 2.4E-34 8.4E-39 262.5 8.6 133 84-239 31-165 (315)
10 3qze_A DHDPS, dihydrodipicolin 100.0 3.4E-34 1.2E-38 261.2 9.1 133 84-239 32-166 (314)
11 3b4u_A Dihydrodipicolinate syn 100.0 2.7E-34 9.3E-39 259.1 8.2 134 84-239 12-150 (294)
12 2wkj_A N-acetylneuraminate lya 100.0 3.2E-34 1.1E-38 259.8 8.5 133 84-239 20-155 (303)
13 3na8_A Putative dihydrodipicol 100.0 3.8E-34 1.3E-38 261.0 8.8 133 84-239 33-167 (315)
14 2ehh_A DHDPS, dihydrodipicolin 100.0 4.9E-34 1.7E-38 257.2 9.3 128 88-239 15-143 (294)
15 3daq_A DHDPS, dihydrodipicolin 100.0 3.1E-34 1.1E-38 258.4 8.0 129 87-239 17-145 (292)
16 2yxg_A DHDPS, dihydrodipicolin 100.0 4.6E-34 1.6E-38 256.8 8.8 128 88-239 15-143 (289)
17 3a5f_A Dihydrodipicolinate syn 100.0 3E-34 1E-38 258.2 7.0 132 84-239 11-144 (291)
18 2r8w_A AGR_C_1641P; APC7498, d 100.0 5.4E-34 1.8E-38 261.9 8.8 133 84-239 43-177 (332)
19 2rfg_A Dihydrodipicolinate syn 100.0 3.7E-34 1.3E-38 258.8 7.4 130 87-239 14-143 (297)
20 3fkr_A L-2-keto-3-deoxyarabona 100.0 1.3E-33 4.5E-38 256.6 11.1 132 84-239 17-153 (309)
21 2v9d_A YAGE; dihydrodipicolini 100.0 7E-34 2.4E-38 262.3 9.3 133 84-239 40-174 (343)
22 1o5k_A DHDPS, dihydrodipicolin 100.0 7.6E-34 2.6E-38 257.7 8.4 129 88-239 27-155 (306)
23 3m5v_A DHDPS, dihydrodipicolin 100.0 9.6E-34 3.3E-38 256.2 8.9 130 87-239 21-151 (301)
24 3h5d_A DHDPS, dihydrodipicolin 100.0 1.9E-33 6.4E-38 256.0 10.8 133 84-239 16-151 (311)
25 3s5o_A 4-hydroxy-2-oxoglutarat 100.0 9E-34 3.1E-38 257.3 8.6 129 87-239 28-159 (307)
26 2vc6_A MOSA, dihydrodipicolina 100.0 6E-34 2.1E-38 256.3 7.3 129 87-239 14-143 (292)
27 3qfe_A Putative dihydrodipicol 100.0 7.5E-33 2.6E-37 252.8 10.2 129 88-239 26-157 (318)
28 3dz1_A Dihydrodipicolinate syn 100.0 5E-33 1.7E-37 253.0 8.1 129 87-239 22-151 (313)
29 2nuw_A 2-keto-3-deoxygluconate 100.0 1.5E-32 5E-37 247.1 7.9 130 84-239 8-140 (288)
30 1w3i_A EDA, 2-keto-3-deoxy glu 100.0 2.5E-32 8.6E-37 246.1 7.7 130 84-239 8-140 (293)
31 2hmc_A AGR_L_411P, dihydrodipi 100.0 5.6E-32 1.9E-36 250.0 10.0 129 84-239 35-167 (344)
32 2r91_A 2-keto-3-deoxy-(6-phosp 100.0 4.5E-32 1.5E-36 243.5 8.6 125 88-239 13-139 (286)
33 4dpp_A DHDPS 2, dihydrodipicol 100.0 8.8E-32 3E-36 250.8 8.3 131 84-239 68-200 (360)
34 3d0c_A Dihydrodipicolinate syn 100.0 3.9E-31 1.3E-35 240.8 9.8 124 87-239 26-150 (314)
35 3e96_A Dihydrodipicolinate syn 100.0 1.1E-30 3.9E-35 237.8 8.7 123 84-230 20-145 (316)
36 2pcq_A Putative dihydrodipicol 100.0 2.9E-31 1E-35 238.1 2.3 127 84-239 7-135 (283)
37 2ftp_A Hydroxymethylglutaryl-C 97.0 0.0044 1.5E-07 55.3 10.5 107 121-229 89-210 (302)
38 2cw6_A Hydroxymethylglutaryl-C 96.7 0.016 5.6E-07 51.4 12.0 109 121-231 86-209 (298)
39 1ydn_A Hydroxymethylglutaryl-C 96.6 0.016 5.5E-07 51.2 11.2 107 121-229 85-206 (295)
40 3ble_A Citramalate synthase fr 96.5 0.026 9.1E-07 51.3 11.7 106 121-228 102-219 (337)
41 1ydo_A HMG-COA lyase; TIM-barr 96.4 0.024 8.2E-07 51.0 11.0 106 121-228 87-207 (307)
42 3i4e_A Isocitrate lyase; struc 96.3 0.069 2.3E-06 51.0 13.7 95 134-234 196-324 (439)
43 3lg3_A Isocitrate lyase; conse 96.1 0.082 2.8E-06 50.4 13.1 94 135-234 197-324 (435)
44 3eol_A Isocitrate lyase; seatt 96.0 0.068 2.3E-06 50.9 12.2 95 134-234 189-319 (433)
45 1to3_A Putative aldolase YIHT; 95.9 0.07 2.4E-06 48.0 11.5 103 121-227 114-227 (304)
46 3ih1_A Methylisocitrate lyase; 95.8 0.051 1.7E-06 49.4 9.9 82 134-227 132-216 (305)
47 1f8m_A Isocitrate lyase, ICL; 95.4 0.24 8.2E-06 47.1 13.2 95 134-234 192-320 (429)
48 2hjp_A Phosphonopyruvate hydro 95.2 0.13 4.5E-06 46.3 10.6 85 133-227 117-210 (290)
49 2qjg_A Putative aldolase MJ040 95.1 0.26 9E-06 42.3 11.8 92 121-228 105-208 (273)
50 3ewb_X 2-isopropylmalate synth 95.0 0.3 1E-05 43.5 12.4 100 127-228 92-203 (293)
51 3fa4_A 2,3-dimethylmalate lyas 95.0 0.24 8.2E-06 44.9 11.6 84 135-227 124-212 (302)
52 3rmj_A 2-isopropylmalate synth 94.9 0.35 1.2E-05 44.7 12.7 100 127-228 99-210 (370)
53 3hgj_A Chromate reductase; TIM 94.5 0.46 1.6E-05 43.1 12.2 111 115-227 152-293 (349)
54 3khj_A Inosine-5-monophosphate 94.3 0.33 1.1E-05 44.6 11.0 108 102-230 46-153 (361)
55 3lye_A Oxaloacetate acetyl hyd 94.2 0.37 1.2E-05 43.8 10.8 85 134-227 131-220 (307)
56 1jub_A Dihydroorotate dehydrog 93.9 0.87 3E-05 39.9 12.5 68 163-232 93-168 (311)
57 2ekc_A AQ_1548, tryptophan syn 93.9 0.32 1.1E-05 42.4 9.5 64 169-232 24-106 (262)
58 3b8i_A PA4872 oxaloacetate dec 93.7 0.56 1.9E-05 42.1 11.0 77 142-228 132-210 (287)
59 1zlp_A PSR132, petal death pro 93.7 0.53 1.8E-05 43.0 10.9 85 133-227 143-230 (318)
60 2e6f_A Dihydroorotate dehydrog 93.5 0.26 8.8E-06 43.4 8.3 68 163-232 93-170 (314)
61 3eoo_A Methylisocitrate lyase; 93.4 0.45 1.5E-05 43.0 9.9 84 134-227 126-212 (298)
62 2r14_A Morphinone reductase; H 93.1 0.44 1.5E-05 43.9 9.6 80 144-227 211-304 (377)
63 1vyr_A Pentaerythritol tetrani 92.8 0.88 3E-05 41.6 11.1 79 144-227 206-299 (364)
64 3eeg_A 2-isopropylmalate synth 92.7 0.23 7.7E-06 45.0 6.9 99 128-228 94-204 (325)
65 2e6f_A Dihydroorotate dehydrog 92.7 0.59 2E-05 41.0 9.4 81 144-227 144-249 (314)
66 1y0e_A Putative N-acetylmannos 92.6 1.2 4E-05 36.8 10.6 92 124-227 84-180 (223)
67 1s2w_A Phosphoenolpyruvate pho 92.4 0.7 2.4E-05 41.5 9.7 88 133-227 121-214 (295)
68 3ivs_A Homocitrate synthase, m 92.4 1.3 4.4E-05 41.9 11.8 106 121-229 116-230 (423)
69 1w8s_A FBP aldolase, fructose- 92.3 0.4 1.4E-05 41.9 7.8 87 121-219 165-253 (263)
70 2nx9_A Oxaloacetate decarboxyl 92.2 1.5 5.1E-05 41.8 12.2 96 122-229 107-208 (464)
71 2ze3_A DFA0005; organic waste 92.2 0.8 2.7E-05 40.7 9.7 94 123-226 100-208 (275)
72 1nvm_A HOA, 4-hydroxy-2-oxoval 92.1 1.5 5E-05 39.6 11.6 91 127-228 106-200 (345)
73 1z41_A YQJM, probable NADH-dep 92.1 1.9 6.6E-05 38.6 12.2 80 144-227 189-282 (338)
74 3tb6_A Arabinose metabolism tr 91.8 1.1 3.7E-05 37.2 9.7 65 163-232 45-109 (298)
75 4fo4_A Inosine 5'-monophosphat 91.6 0.84 2.9E-05 42.1 9.5 113 101-231 46-158 (366)
76 1rd5_A Tryptophan synthase alp 91.6 0.69 2.4E-05 39.7 8.3 57 170-227 26-99 (262)
77 1xg4_A Probable methylisocitra 91.1 1 3.4E-05 40.6 9.2 85 133-227 121-208 (295)
78 1ps9_A 2,4-dienoyl-COA reducta 91.1 2.4 8.2E-05 41.0 12.5 82 144-227 186-285 (671)
79 2qiw_A PEP phosphonomutase; st 91.0 1.4 4.6E-05 38.8 9.8 99 123-231 101-213 (255)
80 3l49_A ABC sugar (ribose) tran 90.9 2.1 7.2E-05 35.5 10.5 76 149-232 21-96 (291)
81 3nvt_A 3-deoxy-D-arabino-heptu 90.7 0.68 2.3E-05 43.1 8.0 63 163-227 142-211 (385)
82 1jub_A Dihydroorotate dehydrog 90.6 0.94 3.2E-05 39.7 8.4 81 144-227 142-247 (311)
83 1icp_A OPR1, 12-oxophytodienoa 90.6 1.4 4.7E-05 40.5 9.9 81 144-227 212-306 (376)
84 1rqb_A Transcarboxylase 5S sub 90.4 2.3 7.8E-05 41.4 11.6 97 122-229 124-227 (539)
85 3gr7_A NADPH dehydrogenase; fl 90.4 2.6 9E-05 38.0 11.4 80 144-227 189-282 (340)
86 3l5l_A Xenobiotic reductase A; 90.3 0.37 1.3E-05 44.0 5.7 82 144-227 203-300 (363)
87 1qwg_A PSL synthase;, (2R)-pho 90.3 1.1 3.6E-05 39.9 8.4 86 141-232 109-208 (251)
88 2qjg_A Putative aldolase MJ040 90.2 0.5 1.7E-05 40.5 6.1 84 123-219 174-259 (273)
89 1w8s_A FBP aldolase, fructose- 90.0 3.3 0.00011 36.0 11.4 93 121-227 98-201 (263)
90 2gou_A Oxidoreductase, FMN-bin 90.0 0.64 2.2E-05 42.5 7.0 79 144-227 206-298 (365)
91 3o74_A Fructose transport syst 90.0 2.6 8.9E-05 34.4 10.1 77 147-232 16-92 (272)
92 3l6u_A ABC-type sugar transpor 89.8 3.3 0.00011 34.2 10.8 80 146-233 21-100 (293)
93 1ep3_A Dihydroorotate dehydrog 89.8 2.5 8.6E-05 36.5 10.4 89 141-233 77-175 (311)
94 1z41_A YQJM, probable NADH-dep 89.7 3.3 0.00011 37.1 11.4 111 120-231 44-218 (338)
95 3b0p_A TRNA-dihydrouridine syn 89.6 1.5 5E-05 39.8 9.1 80 144-227 110-202 (350)
96 1jcn_A Inosine monophosphate d 89.4 2.5 8.6E-05 39.9 10.9 90 123-227 262-363 (514)
97 2yr1_A 3-dehydroquinate dehydr 89.2 3.4 0.00012 36.1 10.8 64 163-231 139-209 (257)
98 3o63_A Probable thiamine-phosp 89.2 5.3 0.00018 34.6 11.9 102 121-227 49-196 (243)
99 3bg3_A Pyruvate carboxylase, m 89.2 3.8 0.00013 41.1 12.4 54 174-229 259-312 (718)
100 3oix_A Putative dihydroorotate 89.2 2.2 7.5E-05 39.0 9.9 86 143-232 110-203 (345)
101 4e38_A Keto-hydroxyglutarate-a 89.2 0.97 3.3E-05 39.4 7.2 80 121-226 99-178 (232)
102 1eep_A Inosine 5'-monophosphat 89.0 1.9 6.5E-05 39.5 9.5 58 165-228 143-200 (404)
103 3uug_A Multiple sugar-binding 89.0 1.6 5.5E-05 37.0 8.4 76 149-232 19-94 (330)
104 3g1w_A Sugar ABC transporter; 88.9 4.1 0.00014 34.0 10.8 62 163-232 34-96 (305)
105 3i65_A Dihydroorotate dehydrog 88.8 7 0.00024 36.8 13.3 84 143-227 231-350 (415)
106 4fo4_A Inosine 5'-monophosphat 88.8 3.2 0.00011 38.2 10.8 91 123-227 115-216 (366)
107 1mxs_A KDPG aldolase; 2-keto-3 88.5 1.6 5.5E-05 37.4 8.0 76 123-226 93-170 (225)
108 1f76_A Dihydroorotate dehydrog 88.4 4.9 0.00017 35.6 11.5 82 145-227 187-294 (336)
109 1zco_A 2-dehydro-3-deoxyphosph 88.4 1.1 3.9E-05 39.3 7.2 62 164-227 24-92 (262)
110 4h3d_A 3-dehydroquinate dehydr 88.3 2.1 7.1E-05 37.5 8.8 71 163-233 19-89 (258)
111 1m3u_A 3-methyl-2-oxobutanoate 88.2 3 0.0001 37.1 9.8 74 141-226 58-134 (264)
112 2hbv_A 2-amino-3-carboxymucona 88.2 1.9 6.6E-05 37.6 8.6 60 169-231 120-180 (334)
113 1wbh_A KHG/KDPG aldolase; lyas 88.2 1.5 5.2E-05 37.2 7.7 79 122-226 82-160 (214)
114 3glc_A Aldolase LSRF; TIM barr 88.2 7.6 0.00026 34.7 12.6 93 121-228 131-229 (295)
115 3ij6_A Uncharacterized metal-d 88.1 1.5 5.1E-05 38.7 7.9 99 127-229 54-162 (312)
116 3irs_A Uncharacterized protein 88.1 1 3.5E-05 39.0 6.7 98 126-231 59-160 (291)
117 1tv5_A Dhodehase, dihydroorota 88.1 7.5 0.00026 36.7 13.1 65 163-227 296-378 (443)
118 1qop_A Tryptophan synthase alp 88.1 0.86 3E-05 39.6 6.2 61 170-231 25-105 (268)
119 4ef8_A Dihydroorotate dehydrog 87.8 1.8 6.2E-05 39.7 8.4 87 143-233 109-204 (354)
120 1eep_A Inosine 5'-monophosphat 87.8 4 0.00014 37.4 10.8 88 124-227 161-261 (404)
121 2yw3_A 4-hydroxy-2-oxoglutarat 87.7 2.3 8E-05 35.6 8.5 79 122-226 77-155 (207)
122 3m9w_A D-xylose-binding peripl 87.7 3.7 0.00013 34.6 9.8 62 163-232 32-93 (313)
123 2ztj_A Homocitrate synthase; ( 87.6 7.6 0.00026 35.6 12.5 105 121-228 80-195 (382)
124 3jy6_A Transcriptional regulat 87.6 5.3 0.00018 32.9 10.6 78 144-232 18-95 (276)
125 1vhc_A Putative KHG/KDPG aldol 87.6 1.9 6.3E-05 37.0 7.9 79 122-226 83-161 (224)
126 3rot_A ABC sugar transporter, 87.6 5.8 0.0002 33.2 10.9 63 163-233 33-97 (297)
127 3zwt_A Dihydroorotate dehydrog 87.6 15 0.00051 33.6 14.5 83 144-227 197-303 (367)
128 2x7x_A Sensor protein; transfe 87.5 7.3 0.00025 33.1 11.7 76 149-232 21-97 (325)
129 3nav_A Tryptophan synthase alp 87.4 1.6 5.6E-05 38.6 7.6 66 168-233 26-110 (271)
130 1p0k_A Isopentenyl-diphosphate 87.2 1 3.6E-05 40.3 6.4 68 141-217 234-303 (349)
131 1ypf_A GMP reductase; GUAC, pu 87.2 4.7 0.00016 36.1 10.7 74 145-227 133-215 (336)
132 1viz_A PCRB protein homolog; s 87.2 0.48 1.6E-05 41.5 3.9 65 165-236 11-78 (240)
133 2nzl_A Hydroxyacid oxidase 1; 86.7 0.78 2.7E-05 42.6 5.3 87 127-219 273-361 (392)
134 2nli_A Lactate oxidase; flavoe 86.7 0.74 2.5E-05 42.3 5.1 86 127-218 250-337 (368)
135 3hcw_A Maltose operon transcri 86.6 4.5 0.00015 33.9 9.7 78 145-232 24-101 (295)
136 3ffs_A Inosine-5-monophosphate 86.6 4.3 0.00015 37.9 10.3 64 121-196 149-212 (400)
137 3e61_A Putative transcriptiona 86.6 2.9 9.8E-05 34.5 8.3 77 144-232 19-96 (277)
138 3aty_A Tcoye, prostaglandin F2 86.5 5 0.00017 36.9 10.6 84 137-227 215-312 (379)
139 3vav_A 3-methyl-2-oxobutanoate 86.4 9.4 0.00032 34.1 12.0 76 141-228 70-148 (275)
140 3ksm_A ABC-type sugar transpor 86.4 4.8 0.00016 32.8 9.5 62 163-232 30-94 (276)
141 2dvt_A Thermophilic reversible 86.1 4.3 0.00015 34.7 9.5 66 163-230 94-166 (327)
142 3k4h_A Putative transcriptiona 85.9 4 0.00014 33.8 8.9 75 148-232 28-102 (292)
143 3egc_A Putative ribose operon 85.8 4.7 0.00016 33.5 9.3 79 144-232 19-97 (291)
144 1ep3_A Dihydroorotate dehydrog 85.8 2.2 7.4E-05 36.9 7.5 79 144-227 148-246 (311)
145 3o1n_A 3-dehydroquinate dehydr 85.7 4.8 0.00017 35.5 9.8 65 163-231 159-230 (276)
146 1vrd_A Inosine-5'-monophosphat 85.7 3.3 0.00011 38.8 9.1 93 121-227 242-345 (494)
147 2fvy_A D-galactose-binding per 85.7 7.3 0.00025 32.3 10.5 79 146-232 15-94 (309)
148 2f6k_A Metal-dependent hydrola 85.5 4.3 0.00015 34.3 9.1 66 163-231 90-157 (307)
149 1vs1_A 3-deoxy-7-phosphoheptul 85.5 2.3 7.8E-05 37.8 7.5 63 163-227 38-107 (276)
150 2wm1_A 2-amino-3-carboxymucona 85.4 3.4 0.00012 35.9 8.5 66 163-231 110-177 (336)
151 3qy7_A Tyrosine-protein phosph 85.3 1.6 5.6E-05 38.0 6.4 48 171-219 15-65 (262)
152 2hsa_B 12-oxophytodienoate red 85.1 3.4 0.00012 38.3 8.8 81 144-227 216-324 (402)
153 1ka9_F Imidazole glycerol phos 85.1 2.2 7.5E-05 35.8 6.9 58 149-213 185-242 (252)
154 3sr7_A Isopentenyl-diphosphate 85.0 2.1 7.1E-05 39.5 7.2 65 163-230 144-214 (365)
155 1o66_A 3-methyl-2-oxobutanoate 85.0 4.4 0.00015 36.3 9.1 74 141-226 58-135 (275)
156 1oy0_A Ketopantoate hydroxymet 85.0 2.9 9.8E-05 37.6 7.9 70 146-230 136-222 (281)
157 3khj_A Inosine-5-monophosphate 85.0 11 0.00037 34.4 12.0 90 123-227 112-212 (361)
158 2ioy_A Periplasmic sugar-bindi 84.9 8.4 0.00029 31.9 10.5 76 148-231 16-91 (283)
159 3sgz_A Hydroxyacid oxidase 2; 84.7 0.8 2.7E-05 42.2 4.3 88 126-219 237-326 (352)
160 1vr6_A Phospho-2-dehydro-3-deo 84.6 2.2 7.7E-05 39.3 7.3 63 163-227 106-175 (350)
161 1gte_A Dihydropyrimidine dehyd 84.6 8 0.00027 39.7 12.1 84 145-232 618-713 (1025)
162 3glc_A Aldolase LSRF; TIM barr 84.6 3.3 0.00011 37.1 8.2 84 121-219 195-279 (295)
163 2fn9_A Ribose ABC transporter, 84.5 12 0.00041 30.8 11.2 76 149-232 18-93 (290)
164 3o07_A Pyridoxine biosynthesis 84.5 2.3 7.9E-05 38.5 7.1 73 140-220 167-252 (291)
165 3d02_A Putative LACI-type tran 84.4 11 0.00038 31.1 11.0 76 148-231 19-95 (303)
166 8abp_A L-arabinose-binding pro 84.3 4.4 0.00015 33.7 8.5 59 164-231 33-91 (306)
167 3kru_A NADH:flavin oxidoreduct 84.3 14 0.00049 33.4 12.4 113 119-231 41-219 (343)
168 3vk5_A MOEO5; TIM barrel, tran 84.2 2.2 7.7E-05 38.5 6.9 69 151-227 30-101 (286)
169 2dri_A D-ribose-binding protei 84.1 3.9 0.00013 33.7 8.0 77 148-232 16-92 (271)
170 3vnd_A TSA, tryptophan synthas 84.0 3.4 0.00012 36.4 7.9 68 163-231 17-106 (267)
171 3h75_A Periplasmic sugar-bindi 84.0 4.1 0.00014 35.1 8.4 76 149-233 20-97 (350)
172 3huu_A Transcription regulator 83.9 5.5 0.00019 33.4 9.0 75 148-232 42-116 (305)
173 2fep_A Catabolite control prot 83.8 6.5 0.00022 32.8 9.3 76 147-232 30-105 (289)
174 3iv3_A Tagatose 1,6-diphosphat 83.8 8 0.00027 35.4 10.5 105 121-228 116-251 (332)
175 1ujp_A Tryptophan synthase alp 83.7 3.8 0.00013 36.0 8.1 62 169-232 23-103 (271)
176 4ab4_A Xenobiotic reductase B; 83.7 2.7 9.3E-05 38.6 7.4 73 144-227 198-284 (362)
177 2rjo_A Twin-arginine transloca 83.5 6.9 0.00024 33.3 9.6 77 148-232 20-98 (332)
178 3noy_A 4-hydroxy-3-methylbut-2 83.4 4.3 0.00015 37.8 8.6 73 146-227 120-209 (366)
179 2w6r_A Imidazole glycerol phos 83.4 2 6.9E-05 36.3 6.1 58 149-213 189-246 (266)
180 3gka_A N-ethylmaleimide reduct 83.4 2.8 9.5E-05 38.5 7.4 73 144-227 206-292 (361)
181 3nur_A Amidohydrolase; TIM bar 83.2 2.5 8.5E-05 38.3 6.9 66 163-231 128-195 (357)
182 3cwo_X Beta/alpha-barrel prote 83.1 4 0.00014 32.6 7.5 77 128-215 143-222 (237)
183 1dbq_A Purine repressor; trans 82.7 8.8 0.0003 31.5 9.6 75 149-232 23-97 (289)
184 3f4w_A Putative hexulose 6 pho 82.7 3.1 0.00011 33.9 6.7 87 125-227 74-164 (211)
185 4avf_A Inosine-5'-monophosphat 82.7 11 0.00039 35.6 11.5 63 122-196 235-298 (490)
186 3dbi_A Sugar-binding transcrip 82.6 6.8 0.00023 33.5 9.2 76 148-232 78-153 (338)
187 1ub3_A Aldolase protein; schif 82.6 9.8 0.00033 32.5 10.1 109 117-228 73-182 (220)
188 2ocz_A 3-dehydroquinate dehydr 82.3 5.6 0.00019 34.1 8.4 95 131-230 61-181 (231)
189 3nav_A Tryptophan synthase alp 82.2 2.6 8.8E-05 37.3 6.4 80 133-220 182-269 (271)
190 3kjx_A Transcriptional regulat 82.1 15 0.00053 31.4 11.3 71 149-229 84-154 (344)
191 3kru_A NADH:flavin oxidoreduct 82.0 3.3 0.00011 37.6 7.3 81 144-227 188-282 (343)
192 3h5o_A Transcriptional regulat 82.0 13 0.00046 31.7 10.8 59 163-231 92-150 (339)
193 3hs3_A Ribose operon repressor 81.8 8.5 0.00029 31.9 9.2 72 145-231 22-94 (277)
194 3gbv_A Putative LACI-family tr 81.8 8.5 0.00029 31.7 9.2 55 170-232 50-104 (304)
195 1bwv_A Rubisco, protein (ribul 81.7 7.5 0.00026 37.5 9.9 105 116-228 193-302 (493)
196 4ay7_A Methylcobalamin\: coenz 81.7 5.1 0.00017 35.7 8.3 78 146-224 131-243 (348)
197 3r2g_A Inosine 5'-monophosphat 81.5 11 0.00037 34.8 10.5 109 100-230 41-149 (361)
198 2vk2_A YTFQ, ABC transporter p 81.5 12 0.00043 31.2 10.3 62 163-232 32-93 (306)
199 1ub3_A Aldolase protein; schif 81.3 4 0.00014 35.0 7.2 76 152-227 43-125 (220)
200 1vc4_A Indole-3-glycerol phosp 81.2 3.5 0.00012 35.8 6.9 62 163-230 45-114 (254)
201 3eoo_A Methylisocitrate lyase; 81.1 17 0.00057 32.6 11.5 97 127-226 42-157 (298)
202 1o94_A Tmadh, trimethylamine d 81.0 6.2 0.00021 38.8 9.3 112 120-231 44-225 (729)
203 2iks_A DNA-binding transcripti 80.6 12 0.00039 31.2 9.7 75 148-231 35-109 (293)
204 1u83_A Phosphosulfolactate syn 80.6 3.1 0.00011 37.4 6.3 85 141-232 134-232 (276)
205 4dnh_A Uncharacterized protein 80.5 15 0.0005 34.3 10.9 138 77-229 34-190 (396)
206 2wqp_A Polysialic acid capsule 80.4 3.5 0.00012 37.9 6.9 62 163-226 19-108 (349)
207 3gv0_A Transcriptional regulat 80.4 6.8 0.00023 32.6 8.2 75 148-232 25-99 (288)
208 2tps_A Protein (thiamin phosph 80.3 3.8 0.00013 33.6 6.5 57 166-227 117-177 (227)
209 1sfl_A 3-dehydroquinate dehydr 80.1 6 0.00021 33.9 7.9 78 145-231 111-195 (238)
210 1q7z_A 5-methyltetrahydrofolat 80.0 27 0.00094 33.7 13.3 96 120-231 131-235 (566)
211 1tjy_A Sugar transport protein 80.0 15 0.00053 31.1 10.5 62 163-232 33-95 (316)
212 3kke_A LACI family transcripti 79.9 10 0.00034 31.8 9.2 60 163-232 45-104 (303)
213 1f76_A Dihydroorotate dehydrog 79.9 2.8 9.7E-05 37.1 5.9 50 147-201 274-323 (336)
214 3k30_A Histamine dehydrogenase 79.8 4.5 0.00015 39.3 7.7 78 144-227 202-299 (690)
215 3o1n_A 3-dehydroquinate dehydr 79.7 8.2 0.00028 34.1 8.8 70 163-232 39-108 (276)
216 3i65_A Dihydroorotate dehydrog 79.7 2.4 8.3E-05 39.9 5.6 90 126-220 295-399 (415)
217 1wv2_A Thiazole moeity, thiazo 79.6 5.4 0.00018 35.6 7.5 82 126-218 154-237 (265)
218 3o1i_D Periplasmic protein TOR 79.5 7.7 0.00026 32.1 8.2 76 148-232 20-97 (304)
219 3usb_A Inosine-5'-monophosphat 79.5 16 0.00053 34.8 11.3 65 121-196 261-325 (511)
220 1mzh_A Deoxyribose-phosphate a 79.4 12 0.00041 31.5 9.5 79 144-227 100-180 (225)
221 1qpz_A PURA, protein (purine n 79.3 14 0.00049 31.5 10.1 74 149-231 74-147 (340)
222 3tsm_A IGPS, indole-3-glycerol 79.1 4.1 0.00014 36.1 6.6 62 163-230 58-128 (272)
223 4inf_A Metal-dependent hydrola 78.8 4.1 0.00014 37.1 6.7 65 163-230 146-212 (373)
224 3bbl_A Regulatory protein of L 78.6 6.4 0.00022 32.7 7.5 60 163-232 38-97 (287)
225 3brq_A HTH-type transcriptiona 78.6 11 0.00036 31.0 8.7 60 163-231 51-110 (296)
226 2o20_A Catabolite control prot 78.5 11 0.00038 32.1 9.1 72 150-231 80-151 (332)
227 3brs_A Periplasmic binding pro 78.4 11 0.00039 30.8 8.9 76 149-232 23-100 (289)
228 2rgy_A Transcriptional regulat 78.3 9.2 0.00031 31.8 8.4 75 148-232 23-100 (290)
229 2hsa_B 12-oxophytodienoate red 78.3 17 0.0006 33.5 10.9 56 176-231 171-246 (402)
230 3q58_A N-acetylmannosamine-6-p 78.3 4.2 0.00014 34.7 6.3 89 124-227 97-186 (229)
231 4adt_A Pyridoxine biosynthetic 78.3 1.5 5E-05 39.5 3.5 68 151-228 12-84 (297)
232 1p0k_A Isopentenyl-diphosphate 78.1 10 0.00035 33.8 9.0 42 148-196 166-209 (349)
233 1ka9_F Imidazole glycerol phos 78.1 2.9 9.8E-05 35.0 5.1 52 175-228 30-81 (252)
234 2nql_A AGR_PAT_674P, isomerase 77.6 4.2 0.00014 36.9 6.4 73 145-228 192-265 (388)
235 1geq_A Tryptophan synthase alp 77.6 21 0.00073 29.6 10.5 92 121-227 101-196 (248)
236 1gud_A ALBP, D-allose-binding 77.5 15 0.00052 30.5 9.5 76 148-231 16-93 (288)
237 3gr7_A NADPH dehydrogenase; fl 77.5 18 0.00063 32.4 10.6 112 119-231 43-218 (340)
238 2ovl_A Putative racemase; stru 77.3 16 0.00055 32.7 10.2 75 144-228 173-248 (371)
239 3p6l_A Sugar phosphate isomera 77.2 13 0.00044 30.7 8.9 80 141-233 58-139 (262)
240 1h5y_A HISF; histidine biosynt 76.9 4 0.00014 33.5 5.6 53 176-230 33-85 (253)
241 1icp_A OPR1, 12-oxophytodienoa 76.9 14 0.00049 33.7 9.9 56 176-231 167-242 (376)
242 2ze3_A DFA0005; organic waste 76.8 7.2 0.00024 34.5 7.5 85 141-228 57-149 (275)
243 3igs_A N-acetylmannosamine-6-p 76.7 6.5 0.00022 33.5 7.0 88 125-227 98-186 (232)
244 1tv5_A Dhodehase, dihydroorota 76.6 7.7 0.00026 36.6 8.1 71 126-201 323-407 (443)
245 2yr1_A 3-dehydroquinate dehydr 76.5 17 0.00059 31.5 9.8 72 163-234 19-90 (257)
246 3qfw_A Ribulose-1,5-bisphospha 76.4 20 0.00069 33.3 10.8 113 105-228 137-254 (378)
247 1mdl_A Mandelate racemase; iso 76.4 7.5 0.00026 34.6 7.6 75 144-228 171-246 (359)
248 1rvk_A Isomerase/lactonizing e 76.4 23 0.0008 31.6 11.0 75 144-228 182-257 (382)
249 1kbi_A Cytochrome B2, L-LCR; f 76.3 5 0.00017 38.4 6.8 38 151-197 334-372 (511)
250 4dzi_A Putative TIM-barrel met 76.2 6.2 0.00021 36.7 7.3 85 142-230 133-232 (423)
251 1gox_A (S)-2-hydroxy-acid oxid 76.2 2.6 9E-05 38.4 4.7 88 125-218 243-333 (370)
252 1h5y_A HISF; histidine biosynt 76.2 7.1 0.00024 32.0 6.9 58 150-214 188-245 (253)
253 3qja_A IGPS, indole-3-glycerol 76.1 12 0.0004 32.9 8.7 85 124-227 131-218 (272)
254 2c6q_A GMP reductase 2; TIM ba 75.7 17 0.00059 32.8 10.0 45 146-197 146-190 (351)
255 1vcf_A Isopentenyl-diphosphate 75.7 13 0.00046 32.9 9.1 64 150-219 245-309 (332)
256 1sfl_A 3-dehydroquinate dehydr 75.6 8.9 0.00031 32.9 7.7 69 164-233 4-73 (238)
257 3bo9_A Putative nitroalkan dio 75.5 4.4 0.00015 36.1 5.9 58 163-227 124-181 (326)
258 1thf_D HISF protein; thermophI 75.4 5.3 0.00018 33.3 6.1 58 150-214 185-242 (253)
259 3tjx_A Dihydroorotate dehydrog 75.3 21 0.00072 31.9 10.4 70 163-234 126-205 (354)
260 1ps9_A 2,4-dienoyl-COA reducta 75.3 18 0.00061 34.9 10.5 109 119-227 41-213 (671)
261 2yci_X 5-methyltetrahydrofolat 75.1 8.4 0.00029 33.9 7.5 55 174-230 32-86 (271)
262 1xm3_A Thiazole biosynthesis p 75.1 6.6 0.00022 34.0 6.7 72 134-216 155-227 (264)
263 2h3h_A Sugar ABC transporter, 75.0 36 0.0012 28.4 12.1 62 163-232 30-92 (313)
264 3d8u_A PURR transcriptional re 75.0 9 0.00031 31.3 7.2 73 149-231 19-91 (275)
265 3c3k_A Alanine racemase; struc 74.8 13 0.00043 30.8 8.3 75 147-232 22-96 (285)
266 2v82_A 2-dehydro-3-deoxy-6-pho 74.8 17 0.00058 29.5 8.9 52 163-227 101-153 (212)
267 1to3_A Putative aldolase YIHT; 74.6 14 0.00047 32.9 8.9 82 124-210 186-271 (304)
268 2gjl_A Hypothetical protein PA 74.6 17 0.00057 32.0 9.4 67 150-227 109-177 (328)
269 3e3m_A Transcriptional regulat 74.4 14 0.00046 32.0 8.6 73 148-230 85-157 (355)
270 2qgy_A Enolase from the enviro 74.4 24 0.00081 31.9 10.5 74 145-228 177-251 (391)
271 2og9_A Mandelate racemase/muco 74.3 22 0.00075 32.2 10.3 76 144-229 189-265 (393)
272 2wje_A CPS4B, tyrosine-protein 74.3 6.2 0.00021 33.2 6.3 47 171-218 19-68 (247)
273 1thf_D HISF protein; thermophI 73.9 4.5 0.00015 33.8 5.2 51 176-228 30-80 (253)
274 3mqt_A Mandelate racemase/muco 73.8 12 0.0004 34.2 8.4 75 144-228 182-258 (394)
275 1kbi_A Cytochrome B2, L-LCR; f 73.7 3.7 0.00013 39.3 5.2 86 127-218 364-456 (511)
276 3q58_A N-acetylmannosamine-6-p 73.5 18 0.00063 30.7 9.1 60 151-226 6-73 (229)
277 2nli_A Lactate oxidase; flavoe 73.4 12 0.00042 34.0 8.4 44 141-197 214-258 (368)
278 1zfj_A Inosine monophosphate d 73.3 25 0.00087 32.5 10.7 65 121-196 238-302 (491)
279 1xg4_A Probable methylisocitra 73.2 8.8 0.0003 34.3 7.2 91 127-220 37-147 (295)
280 2agk_A 1-(5-phosphoribosyl)-5- 73.1 14 0.00048 32.0 8.4 79 131-214 174-257 (260)
281 1vcv_A Probable deoxyribose-ph 73.1 29 0.001 29.8 10.3 106 120-226 72-188 (226)
282 1h7n_A 5-aminolaevulinic acid 72.8 7.2 0.00025 36.0 6.6 91 125-231 169-290 (342)
283 2v82_A 2-dehydro-3-deoxy-6-pho 72.8 8.2 0.00028 31.5 6.5 57 163-227 6-62 (212)
284 3bil_A Probable LACI-family tr 72.8 20 0.00067 31.0 9.3 73 149-231 82-154 (348)
285 2rdx_A Mandelate racemase/muco 72.4 15 0.00052 32.9 8.7 72 144-228 171-243 (379)
286 3k30_A Histamine dehydrogenase 72.2 12 0.00041 36.3 8.5 109 123-231 52-233 (690)
287 3vnd_A TSA, tryptophan synthas 72.2 4.3 0.00015 35.7 4.9 57 133-197 180-236 (267)
288 2qde_A Mandelate racemase/muco 72.2 10 0.00035 34.4 7.5 75 144-228 171-246 (397)
289 2o56_A Putative mandelate race 72.2 9.9 0.00034 34.5 7.5 73 146-228 199-272 (407)
290 1qo2_A Molecule: N-((5-phospho 72.1 7.7 0.00026 32.4 6.3 82 125-213 154-240 (241)
291 3lab_A Putative KDPG (2-keto-3 72.1 11 0.00039 32.3 7.4 80 121-226 78-163 (217)
292 1tzz_A Hypothetical protein L1 72.1 27 0.00094 31.4 10.4 76 144-229 192-268 (392)
293 3vcn_A Mannonate dehydratase; 72.1 25 0.00087 32.4 10.3 72 147-228 212-284 (425)
294 2gl5_A Putative dehydratase pr 72.1 23 0.00079 32.0 9.9 74 146-229 202-276 (410)
295 3iv3_A Tagatose 1,6-diphosphat 72.0 7.6 0.00026 35.5 6.6 55 141-198 226-282 (332)
296 1nu5_A Chloromuconate cycloiso 72.0 25 0.00085 31.3 10.0 75 144-228 170-245 (370)
297 3sr7_A Isopentenyl-diphosphate 71.9 6 0.00021 36.4 5.9 58 157-219 273-332 (365)
298 1pv8_A Delta-aminolevulinic ac 71.8 6.8 0.00023 36.0 6.1 141 75-231 102-279 (330)
299 1lt8_A Betaine-homocysteine me 71.8 28 0.00096 32.4 10.5 98 120-231 144-250 (406)
300 3v3w_A Starvation sensing prot 71.7 33 0.0011 31.6 11.0 73 146-228 210-283 (424)
301 4f2d_A L-arabinose isomerase; 71.6 24 0.00081 33.8 10.2 91 132-230 11-105 (500)
302 2ekc_A AQ_1548, tryptophan syn 71.5 5.9 0.0002 34.2 5.6 79 133-220 179-260 (262)
303 1gte_A Dihydropyrimidine dehyd 71.4 8.7 0.0003 39.4 7.6 80 144-227 687-792 (1025)
304 2hjp_A Phosphonopyruvate hydro 71.3 20 0.0007 31.8 9.1 77 141-220 56-145 (290)
305 2fli_A Ribulose-phosphate 3-ep 71.3 11 0.00038 30.7 6.9 60 147-215 155-216 (220)
306 3ih1_A Methylisocitrate lyase; 71.2 44 0.0015 30.0 11.4 96 127-227 49-162 (305)
307 3go2_A Putative L-alanine-DL-g 71.2 27 0.00092 32.0 10.2 69 147-227 198-267 (409)
308 3mkc_A Racemase; metabolic pro 71.0 13 0.00046 33.9 8.1 75 143-227 186-262 (394)
309 3b0p_A TRNA-dihydrouridine syn 70.9 10 0.00035 34.2 7.2 63 163-227 57-131 (350)
310 1h1y_A D-ribulose-5-phosphate 70.8 14 0.00049 30.7 7.7 58 152-219 164-223 (228)
311 1wdd_A Ribulose bisphosphate c 70.8 13 0.00045 35.6 8.2 84 113-197 181-269 (477)
312 1tx2_A DHPS, dihydropteroate s 70.8 12 0.00043 33.4 7.6 66 164-230 39-123 (297)
313 3sgz_A Hydroxyacid oxidase 2; 70.7 4.7 0.00016 37.1 4.9 45 141-198 202-247 (352)
314 3ddm_A Putative mandelate race 70.7 20 0.00068 32.7 9.1 76 144-228 181-257 (392)
315 1zlp_A PSR132, petal death pro 70.4 13 0.00043 33.8 7.7 78 141-220 81-169 (318)
316 3stp_A Galactonate dehydratase 70.4 18 0.00061 33.4 8.9 72 146-227 214-286 (412)
317 1o94_A Tmadh, trimethylamine d 70.3 13 0.00045 36.4 8.4 107 115-227 149-296 (729)
318 3l5a_A NADH/flavin oxidoreduct 70.3 14 0.00048 34.4 8.2 85 114-199 169-288 (419)
319 3fk4_A Rubisco-like protein; s 70.2 24 0.00081 33.2 9.7 80 116-197 157-241 (414)
320 4a29_A Engineered retro-aldol 70.1 13 0.00043 33.0 7.4 61 163-230 45-112 (258)
321 1aj0_A DHPS, dihydropteroate s 70.1 58 0.002 28.7 12.3 96 119-230 42-141 (282)
322 4avf_A Inosine-5'-monophosphat 70.1 21 0.0007 33.8 9.4 71 124-199 287-364 (490)
323 3vkj_A Isopentenyl-diphosphate 70.0 14 0.00049 33.8 8.0 44 148-197 175-219 (368)
324 3igs_A N-acetylmannosamine-6-p 69.9 21 0.00072 30.3 8.6 59 152-226 7-73 (232)
325 3bw2_A 2-nitropropane dioxygen 69.9 9.6 0.00033 34.3 6.8 58 163-227 145-213 (369)
326 2zad_A Muconate cycloisomerase 69.9 29 0.001 30.6 9.9 76 144-228 165-241 (345)
327 3ozy_A Putative mandelate race 69.6 19 0.00065 32.7 8.8 75 144-228 177-253 (389)
328 1i4n_A Indole-3-glycerol phosp 69.6 6.6 0.00023 34.4 5.4 61 163-230 40-109 (251)
329 3iwp_A Copper homeostasis prot 69.6 4.1 0.00014 36.7 4.2 97 75-182 114-230 (287)
330 2poz_A Putative dehydratase; o 69.6 29 0.001 31.2 10.0 73 146-228 183-256 (392)
331 1gox_A (S)-2-hydroxy-acid oxid 69.5 28 0.00097 31.5 9.9 65 151-227 216-285 (370)
332 1ujp_A Tryptophan synthase alp 69.5 3.4 0.00012 36.3 3.6 77 133-220 176-253 (271)
333 1tkk_A Similar to chloromucona 69.5 51 0.0018 29.2 11.5 77 144-228 167-244 (366)
334 2h9a_B CO dehydrogenase/acetyl 69.4 9.5 0.00032 34.4 6.6 53 176-230 74-130 (310)
335 3nwr_A A rubisco-like protein; 69.4 19 0.00064 34.1 8.8 101 117-228 179-284 (432)
336 2qq6_A Mandelate racemase/muco 69.3 37 0.0013 30.8 10.6 73 146-228 194-267 (410)
337 1jvn_A Glutamine, bifunctional 69.1 7.3 0.00025 37.5 6.1 45 177-227 453-501 (555)
338 2w6r_A Imidazole glycerol phos 68.9 3.2 0.00011 35.1 3.2 50 177-228 31-80 (266)
339 2htm_A Thiazole biosynthesis p 68.9 14 0.00047 33.0 7.4 80 127-216 145-226 (268)
340 2yzr_A Pyridoxal biosynthesis 68.8 5.6 0.00019 36.5 4.9 63 150-220 230-294 (330)
341 4h3d_A 3-dehydroquinate dehydr 68.6 32 0.0011 29.8 9.6 65 163-231 139-210 (258)
342 3qk7_A Transcriptional regulat 68.6 12 0.00043 31.1 6.8 77 144-231 21-97 (294)
343 4e5t_A Mandelate racemase / mu 68.5 18 0.00061 33.1 8.4 74 145-228 191-265 (404)
344 1f6y_A 5-methyltetrahydrofolat 68.5 36 0.0012 29.6 10.0 87 132-227 94-195 (262)
345 3clk_A Transcription regulator 68.4 12 0.00041 31.0 6.7 73 149-231 24-97 (290)
346 2z6i_A Trans-2-enoyl-ACP reduc 68.2 3.8 0.00013 36.5 3.7 58 163-227 110-167 (332)
347 2qu7_A Putative transcriptiona 68.2 11 0.00038 31.1 6.4 73 148-232 22-94 (288)
348 3qja_A IGPS, indole-3-glycerol 68.2 4.2 0.00014 35.8 3.9 48 177-230 73-121 (272)
349 2pp0_A L-talarate/galactarate 68.1 15 0.0005 33.5 7.7 76 144-229 202-278 (398)
350 1vyr_A Pentaerythritol tetrani 68.0 31 0.0011 31.2 9.9 52 176-227 161-232 (364)
351 2f6u_A GGGPS, (S)-3-O-geranylg 67.9 5.4 0.00018 34.6 4.5 57 165-228 11-67 (234)
352 1eye_A DHPS 1, dihydropteroate 67.9 64 0.0022 28.4 12.5 114 92-230 15-132 (280)
353 4ef8_A Dihydroorotate dehydrog 67.8 21 0.0007 32.6 8.6 81 144-227 177-282 (354)
354 2qyg_A Ribulose bisphosphate c 67.8 16 0.00054 34.9 8.0 95 123-228 208-307 (452)
355 1vzw_A Phosphoribosyl isomeras 67.7 6 0.00021 33.0 4.6 47 177-227 147-195 (244)
356 1jvn_A Glutamine, bifunctional 67.7 11 0.00038 36.2 7.0 80 126-213 463-543 (555)
357 3bjs_A Mandelate racemase/muco 67.7 14 0.00047 34.2 7.5 75 144-228 211-287 (428)
358 4e4u_A Mandalate racemase/muco 67.5 19 0.00065 33.1 8.4 74 145-228 184-258 (412)
359 3rcy_A Mandelate racemase/muco 67.4 21 0.00071 33.2 8.7 74 145-228 186-260 (433)
360 3ngj_A Deoxyribose-phosphate a 67.3 10 0.00034 33.2 6.1 76 152-227 67-149 (239)
361 3sjn_A Mandelate racemase/muco 67.3 18 0.00062 32.6 8.1 75 144-228 175-251 (374)
362 4djd_D C/Fe-SP, corrinoid/iron 67.3 25 0.00086 31.9 9.0 91 124-228 150-252 (323)
363 4fxs_A Inosine-5'-monophosphat 67.1 8.5 0.00029 36.5 6.0 63 163-231 219-281 (496)
364 2ox4_A Putative mandelate race 67.0 32 0.0011 31.0 9.7 73 146-228 193-266 (403)
365 1geq_A Tryptophan synthase alp 66.6 22 0.00074 29.6 7.9 65 163-229 4-87 (248)
366 3r2g_A Inosine 5'-monophosphat 66.5 16 0.00055 33.6 7.6 61 123-196 107-169 (361)
367 3r0u_A Enzyme of enolase super 66.5 58 0.002 29.5 11.3 76 144-227 168-244 (379)
368 4fxs_A Inosine-5'-monophosphat 66.4 25 0.00087 33.2 9.2 70 125-199 290-366 (496)
369 2oz8_A MLL7089 protein; struct 66.2 24 0.00083 31.8 8.7 78 144-228 172-250 (389)
370 2oem_A 2,3-diketo-5-methylthio 66.1 17 0.0006 34.1 7.9 83 113-197 153-240 (413)
371 1o66_A 3-methyl-2-oxobutanoate 66.1 17 0.0006 32.4 7.5 63 163-232 17-87 (275)
372 2qkf_A 3-deoxy-D-manno-octulos 66.0 3.6 0.00012 36.5 3.0 64 163-227 15-91 (280)
373 3vkj_A Isopentenyl-diphosphate 65.7 5.6 0.00019 36.5 4.4 61 153-219 259-320 (368)
374 3r4e_A Mandelate racemase/muco 65.6 31 0.0011 31.7 9.4 73 146-228 204-277 (418)
375 3tqk_A Phospho-2-dehydro-3-deo 65.5 24 0.00082 32.6 8.5 53 150-203 38-95 (346)
376 3vzx_A Heptaprenylglyceryl pho 65.5 12 0.0004 32.5 6.1 45 181-230 23-67 (228)
377 3i4k_A Muconate lactonizing en 65.4 19 0.00066 32.5 7.9 75 144-228 176-251 (383)
378 1xi3_A Thiamine phosphate pyro 65.4 15 0.00052 29.5 6.5 60 123-196 34-93 (215)
379 3l5l_A Xenobiotic reductase A; 65.2 78 0.0027 28.4 12.0 110 119-228 40-231 (363)
380 2nzl_A Hydroxyacid oxidase 1; 65.1 17 0.0006 33.4 7.6 33 163-195 146-179 (392)
381 2d69_A Ribulose bisphosphate c 65.0 16 0.00055 34.5 7.4 80 116-197 169-253 (430)
382 2y88_A Phosphoribosyl isomeras 64.9 5.8 0.0002 32.9 4.0 46 177-227 150-198 (244)
383 1f6y_A 5-methyltetrahydrofolat 64.9 13 0.00045 32.4 6.4 56 173-230 22-77 (262)
384 1p4c_A L(+)-mandelate dehydrog 64.8 8.8 0.0003 35.1 5.5 66 149-227 214-283 (380)
385 3kdn_A Rubisco, ribulose bisph 64.8 13 0.00046 35.3 6.8 80 116-197 172-256 (444)
386 3usb_A Inosine-5'-monophosphat 64.8 16 0.00056 34.7 7.5 62 163-230 244-305 (511)
387 3toy_A Mandelate racemase/muco 64.7 31 0.0011 31.3 9.2 75 144-228 195-270 (383)
388 2hsg_A Glucose-resistance amyl 64.7 17 0.00057 30.9 6.9 58 164-231 91-148 (332)
389 3hbl_A Pyruvate carboxylase; T 64.7 57 0.0019 34.3 12.1 100 121-230 633-743 (1150)
390 3tji_A Mandelate racemase/muco 64.7 23 0.0008 32.7 8.4 73 146-228 206-279 (422)
391 2qf7_A Pyruvate carboxylase pr 64.6 28 0.00097 36.6 9.9 54 173-229 706-759 (1165)
392 1yad_A Regulatory protein TENI 64.5 10 0.00035 31.2 5.4 56 167-227 112-169 (221)
393 1wa3_A 2-keto-3-deoxy-6-phosph 64.3 32 0.0011 27.6 8.3 70 149-227 49-155 (205)
394 4dwd_A Mandelate racemase/muco 64.2 25 0.00085 32.1 8.4 75 144-228 173-248 (393)
395 3b8i_A PA4872 oxaloacetate dec 64.2 11 0.00039 33.5 6.0 91 127-220 41-149 (287)
396 1oy0_A Ketopantoate hydroxymet 64.2 18 0.0006 32.4 7.2 74 141-226 75-153 (281)
397 2zvi_A 2,3-diketo-5-methylthio 64.0 20 0.00069 33.8 7.9 80 116-197 170-254 (425)
398 2gwg_A 4-oxalomesaconate hydra 64.0 20 0.00069 31.2 7.5 56 174-231 120-181 (350)
399 3l9c_A 3-dehydroquinate dehydr 63.9 47 0.0016 28.9 9.8 97 130-231 91-213 (259)
400 1rd5_A Tryptophan synthase alp 63.7 22 0.00076 30.1 7.5 78 144-227 128-206 (262)
401 4gbu_A NADPH dehydrogenase 1; 63.6 39 0.0013 30.9 9.7 79 121-199 58-195 (400)
402 3hgj_A Chromate reductase; TIM 63.5 68 0.0023 28.6 11.1 113 119-231 41-228 (349)
403 1zq6_A Otcase, ornithine carba 63.5 49 0.0017 30.4 10.3 54 174-231 205-259 (359)
404 3inp_A D-ribulose-phosphate 3- 63.4 29 0.00098 30.1 8.3 74 135-217 168-243 (246)
405 1ykw_A Rubisco-like protein; b 63.4 16 0.00055 34.6 7.1 102 116-228 181-287 (435)
406 1jye_A Lactose operon represso 63.4 58 0.002 27.9 10.3 74 149-231 77-151 (349)
407 4f0h_A Ribulose bisphosphate c 63.4 15 0.00051 35.4 7.0 105 116-228 193-302 (493)
408 3tdn_A FLR symmetric alpha-bet 63.3 5.8 0.0002 33.4 3.7 51 176-228 35-85 (247)
409 3sbf_A Mandelate racemase / mu 63.2 33 0.0011 31.2 9.1 73 146-228 185-258 (401)
410 1m3u_A 3-methyl-2-oxobutanoate 63.0 19 0.00065 31.9 7.1 63 163-232 17-87 (264)
411 1q7z_A 5-methyltetrahydrofolat 63.0 11 0.00037 36.6 6.0 55 174-230 338-392 (566)
412 3gd6_A Muconate cycloisomerase 62.9 36 0.0012 30.9 9.2 74 144-225 168-243 (391)
413 3ugv_A Enolase; enzyme functio 62.9 33 0.0011 31.2 9.0 75 144-228 201-276 (390)
414 2hzg_A Mandelate racemase/muco 62.7 37 0.0013 30.7 9.3 73 146-228 177-253 (401)
415 1l6s_A Porphobilinogen synthas 62.6 16 0.00053 33.5 6.6 90 125-231 154-272 (323)
416 3zwt_A Dihydroorotate dehydrog 62.1 9.9 0.00034 34.8 5.3 49 148-201 284-332 (367)
417 1ypf_A GMP reductase; GUAC, pu 61.9 16 0.00053 32.6 6.5 45 149-200 199-243 (336)
418 1o60_A 2-dehydro-3-deoxyphosph 61.8 4.6 0.00016 36.1 2.9 64 163-227 18-94 (292)
419 3oix_A Putative dihydroorotate 61.7 6.7 0.00023 35.7 4.0 50 149-203 262-312 (345)
420 3ngj_A Deoxyribose-phosphate a 61.6 53 0.0018 28.5 9.6 102 120-226 100-204 (239)
421 1qop_A Tryptophan synthase alp 61.5 12 0.0004 32.3 5.4 80 133-220 179-266 (268)
422 1vli_A Spore coat polysacchari 61.3 17 0.00059 33.8 6.8 34 163-196 28-64 (385)
423 1rpx_A Protein (ribulose-phosp 61.3 27 0.00093 28.7 7.5 70 135-213 152-223 (230)
424 2gdq_A YITF; mandelate racemas 60.9 36 0.0012 30.6 8.8 75 144-228 166-242 (382)
425 1vrd_A Inosine-5'-monophosphat 60.8 16 0.00054 34.1 6.6 58 164-227 226-283 (494)
426 1yad_A Regulatory protein TENI 60.7 22 0.00075 29.1 6.8 59 150-217 154-212 (221)
427 3gdm_A Orotidine 5'-phosphate 60.3 38 0.0013 29.8 8.5 80 141-227 2-90 (267)
428 2h0a_A TTHA0807, transcription 60.2 7.7 0.00026 31.7 3.9 77 146-232 12-88 (276)
429 3rr1_A GALD, putative D-galact 60.2 35 0.0012 31.3 8.6 73 146-228 162-235 (405)
430 2x7v_A Probable endonuclease 4 60.1 70 0.0024 26.2 10.0 86 142-232 43-148 (287)
431 2p8b_A Mandelate racemase/muco 60.0 32 0.0011 30.6 8.2 75 144-228 167-243 (369)
432 2z6i_A Trans-2-enoyl-ACP reduc 59.8 28 0.00097 30.7 7.8 61 127-197 36-96 (332)
433 2yci_X 5-methyltetrahydrofolat 59.8 85 0.0029 27.3 10.8 86 132-227 103-204 (271)
434 3lmz_A Putative sugar isomeras 59.6 39 0.0013 27.7 8.2 76 142-230 57-134 (257)
435 3fok_A Uncharacterized protein 59.6 35 0.0012 30.9 8.4 71 144-227 157-242 (307)
436 1vcf_A Isopentenyl-diphosphate 59.6 17 0.00058 32.2 6.2 43 148-197 170-213 (332)
437 1gcy_A Glucan 1,4-alpha-maltot 59.2 52 0.0018 30.8 9.9 69 165-235 17-119 (527)
438 3vav_A 3-methyl-2-oxobutanoate 59.1 29 0.00098 30.9 7.6 63 163-232 29-99 (275)
439 3q45_A Mandelate racemase/muco 58.9 26 0.00088 31.5 7.4 73 145-227 167-240 (368)
440 3jva_A Dipeptide epimerase; en 58.8 23 0.0008 31.6 7.1 73 146-228 167-240 (354)
441 3tha_A Tryptophan synthase alp 58.7 8.2 0.00028 33.9 3.9 74 134-217 174-250 (252)
442 3h5t_A Transcriptional regulat 58.7 27 0.00094 30.0 7.3 73 148-232 88-161 (366)
443 4e4f_A Mannonate dehydratase; 58.6 32 0.0011 31.7 8.2 70 149-228 215-285 (426)
444 2q22_A Uncharacterized protein 58.6 21 0.00072 28.9 6.1 56 140-196 28-84 (139)
445 3dip_A Enolase; structural gen 58.6 32 0.0011 31.5 8.1 74 146-228 197-271 (410)
446 4h83_A Mandelate racemase/muco 58.5 31 0.0011 31.3 7.9 76 143-227 190-266 (388)
447 2pgw_A Muconate cycloisomerase 58.2 30 0.001 31.1 7.7 74 144-228 173-247 (384)
448 1byk_A Protein (trehalose oper 58.2 37 0.0013 27.3 7.7 71 149-231 18-88 (255)
449 3ffs_A Inosine-5-monophosphate 57.7 32 0.0011 32.0 8.0 47 179-230 146-192 (400)
450 4dxk_A Mandelate racemase / mu 57.5 40 0.0014 30.7 8.5 72 146-227 194-266 (400)
451 3p3b_A Mandelate racemase/muco 57.2 48 0.0016 29.9 9.0 73 146-229 185-263 (392)
452 3w01_A Heptaprenylglyceryl pho 57.2 20 0.00069 31.2 6.1 42 184-230 31-72 (235)
453 3t6c_A RSPA, putative MAND fam 57.1 29 0.00099 32.3 7.6 73 146-228 224-297 (440)
454 3obk_A Delta-aminolevulinic ac 57.1 18 0.00062 33.5 6.0 90 125-231 173-293 (356)
455 3tsm_A IGPS, indole-3-glycerol 57.0 56 0.0019 28.7 9.1 86 124-226 138-224 (272)
456 3dg3_A Muconate cycloisomerase 56.8 28 0.00095 31.2 7.3 72 147-228 170-242 (367)
457 3tcs_A Racemase, putative; PSI 56.6 73 0.0025 28.9 10.1 70 149-228 186-256 (388)
458 1p9l_A Dihydrodipicolinate red 56.6 35 0.0012 29.3 7.6 89 123-219 64-154 (245)
459 3r12_A Deoxyribose-phosphate a 56.5 27 0.00093 30.8 6.9 74 152-225 83-161 (260)
460 5rub_A Rubisco (ribulose-1,5-b 56.4 58 0.002 31.3 9.7 115 104-228 187-311 (490)
461 2dqw_A Dihydropteroate synthas 56.3 74 0.0025 28.4 9.9 88 125-227 120-228 (294)
462 3oa3_A Aldolase; structural ge 56.3 34 0.0012 30.7 7.6 70 152-221 98-172 (288)
463 2p10_A MLL9387 protein; putati 56.1 21 0.00072 32.1 6.2 84 148-238 13-110 (286)
464 3ceu_A Thiamine phosphate pyro 56.1 14 0.00047 30.5 4.8 55 166-227 89-149 (210)
465 3oa3_A Aldolase; structural ge 55.9 1.1E+02 0.0039 27.2 11.4 106 119-227 130-239 (288)
466 3k13_A 5-methyltetrahydrofolat 55.7 19 0.00065 32.2 5.9 55 174-230 35-92 (300)
467 1w5q_A Delta-aminolevulinic ac 55.4 9.6 0.00033 35.1 3.9 91 124-231 164-286 (337)
468 3vk5_A MOEO5; TIM barrel, tran 55.4 28 0.00096 31.3 6.9 62 150-221 215-276 (286)
469 3tj4_A Mandelate racemase; eno 55.3 29 0.00098 31.2 7.1 75 144-228 179-254 (372)
470 1yxy_A Putative N-acetylmannos 55.2 18 0.00062 29.8 5.4 55 158-226 13-73 (234)
471 2i6u_A Otcase, ornithine carba 55.2 61 0.0021 29.0 9.1 52 176-231 160-211 (307)
472 2y88_A Phosphoribosyl isomeras 54.7 30 0.001 28.5 6.6 42 150-198 64-105 (244)
473 2qr6_A IMP dehydrogenase/GMP r 54.6 50 0.0017 29.8 8.6 59 163-228 155-217 (393)
474 1n7k_A Deoxyribose-phosphate a 54.5 13 0.00043 32.3 4.4 50 173-225 85-136 (234)
475 3bo9_A Putative nitroalkan dio 54.4 16 0.00054 32.5 5.1 72 149-229 165-236 (326)
476 1s2w_A Phosphoenolpyruvate pho 54.3 22 0.00076 31.7 6.1 76 142-220 61-149 (295)
477 2nv1_A Pyridoxal biosynthesis 54.2 15 0.00051 32.2 4.9 82 140-231 1-87 (305)
478 1zfj_A Inosine monophosphate d 54.0 12 0.00042 34.7 4.5 49 175-227 231-279 (491)
479 2ps2_A Putative mandelate race 54.0 38 0.0013 30.2 7.6 72 144-228 172-245 (371)
480 3jvd_A Transcriptional regulat 53.8 50 0.0017 28.1 8.2 67 148-231 79-145 (333)
481 1luc_B Bacterial luciferase; m 53.4 20 0.00067 31.4 5.5 45 173-220 274-319 (324)
482 2qiw_A PEP phosphonomutase; st 53.3 33 0.0011 29.8 7.0 72 142-219 62-139 (255)
483 3k13_A 5-methyltetrahydrofolat 53.1 69 0.0024 28.5 9.2 92 127-227 105-216 (300)
484 1w1z_A Delta-aminolevulinic ac 52.9 9.5 0.00033 35.0 3.4 90 125-231 160-279 (328)
485 3tva_A Xylose isomerase domain 52.7 93 0.0032 25.7 9.5 55 176-231 102-161 (290)
486 3ajx_A 3-hexulose-6-phosphate 52.7 71 0.0024 25.5 8.5 67 150-227 42-108 (207)
487 2hqb_A Transcriptional activat 52.2 54 0.0018 27.7 8.0 60 163-231 37-96 (296)
488 2eja_A URO-D, UPD, uroporphyri 52.2 33 0.0011 30.0 6.9 54 175-229 178-238 (338)
489 4exq_A UPD, URO-D, uroporphyri 52.2 17 0.00057 33.0 5.0 55 175-230 196-260 (368)
490 2hwg_A Phosphoenolpyruvate-pro 52.0 51 0.0017 32.1 8.7 98 124-229 211-333 (575)
491 1r3s_A URO-D, uroporphyrinogen 52.0 17 0.00059 32.5 5.0 53 177-230 198-263 (367)
492 1jcn_A Inosine monophosphate d 51.7 47 0.0016 31.1 8.2 62 163-230 243-304 (514)
493 3cyv_A URO-D, UPD, uroporphyri 51.6 33 0.0011 30.3 6.8 50 178-228 189-248 (354)
494 3my9_A Muconate cycloisomerase 51.2 34 0.0012 30.8 6.9 74 144-227 173-247 (377)
495 2fiq_A Putative tagatose 6-pho 51.0 54 0.0018 30.9 8.4 75 122-199 32-127 (420)
496 3o63_A Probable thiamine-phosp 50.7 18 0.00062 31.1 4.8 82 125-219 152-241 (243)
497 3q98_A Transcarbamylase; rossm 50.4 45 0.0015 31.1 7.7 64 165-232 194-261 (399)
498 3tha_A Tryptophan synthase alp 49.9 21 0.00073 31.2 5.1 67 167-233 19-101 (252)
499 3nl6_A Thiamine biosynthetic b 49.9 26 0.00088 33.8 6.1 56 166-227 109-178 (540)
500 2tps_A Protein (thiamin phosph 49.9 42 0.0014 27.2 6.7 51 178-230 33-86 (227)
No 1
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.1e-34 Score=262.98 Aligned_cols=133 Identities=24% Similarity=0.295 Sum_probs=123.4
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.+++
T Consensus 25 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g 84 (304)
T 3cpr_A 25 VTPFTESGDIDIAAGREVAAYLV--------------------DKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD 84 (304)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred eccCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 455 578888888888888873 2455689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 85 -rvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~-~~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 159 (304)
T 3cpr_A 85 -RAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKP-SQEGLLAHFGAIAAAT-EVPICLYDIPGRSGIPIE 159 (304)
T ss_dssp -TSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSSCCC
T ss_pred -CCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 2
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=100.00 E-value=2.2e-34 Score=259.95 Aligned_cols=129 Identities=22% Similarity=0.338 Sum_probs=118.5
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc-CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCce
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA-PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFT 165 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~-gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvp 165 (239)
++++||++++.++++|+ ++ |+.|++++|||||+++||.+||+++++.+++.++| |+|
T Consensus 21 ~dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvp 78 (297)
T 3flu_A 21 QDGSIHYEQLRDLIDWH---------------------IENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK-RVP 78 (297)
T ss_dssp TTSCBCHHHHHHHHHHH---------------------HHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSC
T ss_pred CCCCcCHHHHHHHHHHH---------------------HHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC-CCc
Confidence 46666666666666665 45 45688999999999999999999999999999999 999
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 79 viaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 150 (297)
T 3flu_A 79 VIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNKP-SQEGIYQHFKTIAEAT-SIPMIIYNVPGRTVVSMT 150 (297)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSSCCC
T ss_pred EEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEECCchhccCCC
Confidence 99999999999999999999999999999999999999 9999999999999999 899999999999999885
No 3
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=100.00 E-value=2.3e-34 Score=260.51 Aligned_cols=133 Identities=21% Similarity=0.307 Sum_probs=122.9
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.++|
T Consensus 21 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g 80 (301)
T 1xky_A 21 VTPFDINGNIDFAKTTKLVNYLI--------------------DNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK 80 (301)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred ECcCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 455 578888888888888773 2455688999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
++|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 81 -rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 155 (301)
T 1xky_A 81 -RVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNKP-SQEGMYQHFKAIAEST-PLPVMLYNVPGRSIVQIS 155 (301)
T ss_dssp -SSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHTC-SSCEEEEECHHHHSSCCC
T ss_pred -CceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 4
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=100.00 E-value=1.8e-34 Score=259.89 Aligned_cols=132 Identities=23% Similarity=0.360 Sum_probs=121.7
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc--CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHh
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA--PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEA 159 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~--gg~glvV~GstGE~~sLT~eER~~li~~vve~~ 159 (239)
++| ++++||++++.++++|+ ++ |+.|++++|||||+++||.+||+++++.+++.+
T Consensus 12 vTPf~~dg~iD~~~l~~lv~~l---------------------i~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~ 70 (293)
T 1f6k_A 12 LVSFNEDGTINEKGLRQIIRHN---------------------IDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEA 70 (293)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHH---------------------HHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCcCHHHHHHHHHHH---------------------HhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHh
Confidence 445 56777877777777777 45 556889999999999999999999999999999
Q ss_pred cCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 160 KTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 160 ~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
+| |+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 71 ~g-rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 147 (293)
T 1f6k_A 71 KD-QIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKF-SFPEIKHYYDTIIAET-GSNMIVYSIPFLTGVNMG 147 (293)
T ss_dssp TT-SSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHH-CCCEEEEECHHHHCCCCC
T ss_pred CC-CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEECccccCcCCC
Confidence 99 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 5
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=100.00 E-value=2.1e-34 Score=259.22 Aligned_cols=133 Identities=25% Similarity=0.365 Sum_probs=122.8
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.++|
T Consensus 10 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g 69 (291)
T 3tak_A 10 VTPMLKDGGVDWKSLEKLVEWHI--------------------EQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK 69 (291)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCcCHHHHHHHHHHHH--------------------HCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC
Confidence 455 577888888888777772 2455689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 70 -r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 144 (291)
T 3tak_A 70 -RIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNKP-TQEGLYQHYKAIAEAV-ELPLILYNVPGRTGVDLS 144 (291)
T ss_dssp -SSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCC
T ss_pred -CCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEecccccCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 6
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=100.00 E-value=1.6e-34 Score=261.48 Aligned_cols=133 Identities=23% Similarity=0.303 Sum_probs=122.8
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.++|
T Consensus 13 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g 72 (300)
T 3eb2_A 13 VSPVDAEGRVRADVMGRLCDDLI--------------------QAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR 72 (300)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTT
T ss_pred eccCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCC
Confidence 445 577888888888777773 2455689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 73 -rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 147 (300)
T 3eb2_A 73 -RVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYFPL-KDAQIESYFRAIADAV-EIPVVIYTNPQFQRSDLT 147 (300)
T ss_dssp -SSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEECCSSCC-CHHHHHHHHHHHHHHC-SSCEEEEECTTTCSSCCC
T ss_pred -CCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHHC-CCCEEEEECccccCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 799999999999999886
No 7
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=100.00 E-value=2e-34 Score=259.53 Aligned_cols=133 Identities=19% Similarity=0.249 Sum_probs=122.7
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.+++
T Consensus 10 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g 69 (292)
T 2ojp_A 10 VTPMDEKGNVCRASLKKLIDYHV--------------------ASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG 69 (292)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred eccCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC
Confidence 455 577888888888877773 2456689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 70 -r~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 144 (292)
T 2ojp_A 70 -RIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRP-SQEGLYQHFKAIAEHT-DLPQILYNVPSRTGCDLL 144 (292)
T ss_dssp -SSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCSSCC-CHHHHHHHHHHHHTTC-SSCEEEECCHHHHSCCCC
T ss_pred -CCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCcchhccCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 8
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=100.00 E-value=2.9e-34 Score=260.43 Aligned_cols=133 Identities=21% Similarity=0.258 Sum_probs=124.0
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++
T Consensus 24 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g 83 (304)
T 3l21_A 24 VTPFSGDGSLDTATAARLANHLV--------------------DQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD 83 (304)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC
Confidence 555 688899888888888873 2455689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
++|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 84 -rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 158 (304)
T 3l21_A 84 -RARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSKP-PQRGLQAHFTAVADAT-ELPMLLYDIPGRSAVPIE 158 (304)
T ss_dssp -TSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHTSC-SSCEEEEECHHHHSSCCC
T ss_pred -CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 9
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=100.00 E-value=2.4e-34 Score=262.48 Aligned_cols=133 Identities=26% Similarity=0.374 Sum_probs=122.8
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++
T Consensus 31 vTPf~~dg~iD~~~l~~li~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g 90 (315)
T 3si9_A 31 ITPFDDNGAIDEKAFCNFVEWQI--------------------TQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK 90 (315)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC
Confidence 455 577888888888877773 2455688999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 91 -rvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~-~~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 165 (315)
T 3si9_A 91 -RVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNRP-NQRGLYTHFSSIAKAI-SIPIIIYNIPSRSVIDMA 165 (315)
T ss_dssp -SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred -CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHcC-CCCEEEEeCchhhCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 10
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=100.00 E-value=3.4e-34 Score=261.21 Aligned_cols=133 Identities=22% Similarity=0.294 Sum_probs=122.1
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.++|
T Consensus 32 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g 91 (314)
T 3qze_A 32 VTPFDAQGRLDWDSLAKLVDFHL--------------------QEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG 91 (314)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 444 577777777777777762 2456689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 92 -rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 166 (314)
T 3qze_A 92 -RIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKP-TQEGMYQHFRHIAEAV-AIPQILYNVPGRTSCDML 166 (314)
T ss_dssp -SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHS-CSCEEEEECHHHHSCCCC
T ss_pred -CCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 11
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.7e-34 Score=259.09 Aligned_cols=134 Identities=20% Similarity=0.265 Sum_probs=123.2
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++
T Consensus 12 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g 71 (294)
T 3b4u_A 12 TTPFKTDGTVDIDAMIAHARRCL--------------------SNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA 71 (294)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC
T ss_pred ECCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 455 577888888888887773 2455688999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCHHHHHHHHHHHHhhCC--CCcEEEEeCCCCccccC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT-PASVEDLVDYLRDVGEAAP--ATPLFYYHIPMFTRVTL 238 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~-~~s~e~iv~yf~~Vaeatp--dLPIiLYN~P~~TG~~L 238 (239)
++|||+|++++||+++++++++|+++|||++|+.||||++ + +++++++||++|++++| ++||||||+|.+||++|
T Consensus 72 -r~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l 149 (294)
T 3b4u_A 72 -PSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYFKNV-SDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTL 149 (294)
T ss_dssp -GGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCSC-CHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCC
T ss_pred -CCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC-CHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCC
Confidence 9999999999999999999999999999999999999999 9 99999999999999997 79999999999999988
Q ss_pred C
Q psy9602 239 K 239 (239)
Q Consensus 239 s 239 (239)
+
T Consensus 150 ~ 150 (294)
T 3b4u_A 150 S 150 (294)
T ss_dssp C
T ss_pred C
Confidence 5
No 12
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=100.00 E-value=3.2e-34 Score=259.79 Aligned_cols=133 Identities=26% Similarity=0.373 Sum_probs=123.0
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++
T Consensus 20 vTPF~~dg~iD~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g 79 (303)
T 2wkj_A 20 LTPFDQQQALDKASLRRLVQFNI--------------------QQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG 79 (303)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred EcCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC
Confidence 455 578888888888888773 2455688999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC-CcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA-TPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd-LPIiLYN~P~~TG~~Ls 239 (239)
++|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ + +||||||+|.+||++|+
T Consensus 80 -rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~~lPiilYn~P~~tg~~l~ 155 (303)
T 2wkj_A 80 -KIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFYYPF-SFEEHCDHYRAIIDSA-DGLPMVVYNIPALSGVKLT 155 (303)
T ss_dssp -TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHH-TTCCEEEEECHHHHCCCCC
T ss_pred -CCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCCCCC-CHHHHHHHHHHHHHhC-CCCCEEEEeCccccCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 6 99999999999999885
No 13
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.8e-34 Score=261.04 Aligned_cols=133 Identities=21% Similarity=0.281 Sum_probs=124.2
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++
T Consensus 33 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g 92 (315)
T 3na8_A 33 ITPFAADGGLDLPALGRSIERLI--------------------DGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH 92 (315)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred eCcCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 555 688899999988888883 2455689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|+++++|+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 93 -rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 167 (315)
T 3na8_A 93 -RVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWKL-NEAEVFQHYRAVGEAI-GVPVMLYNNPGTSGIDMS 167 (315)
T ss_dssp -SSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSCC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred -CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhC-CCcEEEEeCcchhCcCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 14
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=4.9e-34 Score=257.16 Aligned_cols=128 Identities=23% Similarity=0.336 Sum_probs=116.9
Q ss_pred ccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCC-CCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE
Q psy9602 88 VVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPI-IDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV 166 (239)
Q Consensus 88 ~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg-~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpV 166 (239)
+++||++.+.++++|+ ++.| .|++++|||||+++||.+||+++++.+++.++| |+||
T Consensus 15 dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpv 72 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFH---------------------VDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG-RIKV 72 (294)
T ss_dssp TTEECHHHHHHHHHHH---------------------HTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEE
T ss_pred CCCcCHHHHHHHHHHH---------------------HHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcE
Confidence 5556666665555555 5554 578999999999999999999999999999999 9999
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 73 iaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 143 (294)
T 2ehh_A 73 IAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNKP-TQRGLYEHFKTVAQEV-DIPIIIYNIPSRTCVEIS 143 (294)
T ss_dssp EEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCC
T ss_pred EEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCCcccCcCCC
Confidence 9999999999999999999999999999999999999 9999999999999999 899999999999999885
No 15
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=100.00 E-value=3.1e-34 Score=258.45 Aligned_cols=129 Identities=19% Similarity=0.333 Sum_probs=119.2
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV 166 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpV 166 (239)
++ +||++.+.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++ ++||
T Consensus 17 ~d-~iD~~~l~~lv~~li--------------------~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g-rvpv 74 (292)
T 3daq_A 17 NN-KVNLEALKAHVNFLL--------------------ENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK-RVPV 74 (292)
T ss_dssp TT-EECHHHHHHHHHHHH--------------------HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCE
T ss_pred CC-CcCHHHHHHHHHHHH--------------------HcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC-CCcE
Confidence 46 777777777777762 2455688999999999999999999999999999999 9999
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 75 iaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-~~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 145 (292)
T 3daq_A 75 IAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNKT-NQRGLVKHFEAIADAV-KLPVVLYNVPSRTNMTIE 145 (292)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHH-CSCEEEEECHHHHSCCCC
T ss_pred EEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEecccccCCCCC
Confidence 9999999999999999999999999999999999999 9999999999999999 899999999999999886
No 16
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=100.00 E-value=4.6e-34 Score=256.77 Aligned_cols=128 Identities=25% Similarity=0.399 Sum_probs=117.7
Q ss_pred ccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc-CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE
Q psy9602 88 VVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA-PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV 166 (239)
Q Consensus 88 ~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~-gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpV 166 (239)
+++||++.+.++++|+ ++ |+.|++++|||||+++||.+||.++++.+++.+++ |+||
T Consensus 15 dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pv 72 (289)
T 2yxg_A 15 NKEVDFDGLEENINFL---------------------IENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG-RVQV 72 (289)
T ss_dssp TTEECHHHHHHHHHHH---------------------HHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSEE
T ss_pred CCCcCHHHHHHHHHHH---------------------HHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCcE
Confidence 5666666666666665 45 45678999999999999999999999999999999 9999
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 73 iaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 143 (289)
T 2yxg_A 73 IAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNKP-TQEGLRKHFGKVAESI-NLPIVLYNVPSRTAVNLE 143 (289)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred EEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCC
Confidence 9999999999999999999999999999999999999 9999999999999999 899999999999999885
No 17
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=100.00 E-value=3e-34 Score=258.20 Aligned_cols=132 Identities=24% Similarity=0.403 Sum_probs=120.2
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| +++ ||++++.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.++|
T Consensus 11 vTPf~~dg-iD~~~l~~lv~~li--------------------~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g 69 (291)
T 3a5f_A 11 ITPFTNTG-VDFDKLSELIEWHI--------------------KSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK 69 (291)
T ss_dssp CCCBCSSS-BCHHHHHHHHHHHH--------------------HTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred EcCcCCCC-cCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 445 567 88888877777772 2455688999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 70 -r~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 144 (291)
T 3a5f_A 70 -RIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNKT-TQKGLVKHFKAVSDAV-STPIIIYNVPGRTGLNIT 144 (291)
T ss_dssp -SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHC-CTGGGC-CSCEEEEECHHHHSCCCC
T ss_pred -CCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 18
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.4e-34 Score=261.86 Aligned_cols=133 Identities=28% Similarity=0.260 Sum_probs=123.7
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++
T Consensus 43 vTPF~~dg~iD~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g 102 (332)
T 2r8w_A 43 ITPADEAGRVDIEAFSALIARLD--------------------AAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG 102 (332)
T ss_dssp CCCBCTTCCBCHHHHHHHHHHHH--------------------HHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred eCCcCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 455 578888888888888873 2456689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 103 -rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~-s~~~l~~~f~~VA~a~-~lPiilYn~P~~tg~~l~ 177 (332)
T 2r8w_A 103 -RRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSYTPL-TQEEAYHHFAAVAGAT-ALPLAIYNNPTTTRFTFS 177 (332)
T ss_dssp -SSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCSSCC-CHHHHHHHHHHHHHHC-SSCEEEECCHHHHCCCCC
T ss_pred -CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCcCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 19
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=100.00 E-value=3.7e-34 Score=258.77 Aligned_cols=130 Identities=28% Similarity=0.366 Sum_probs=120.4
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV 166 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpV 166 (239)
++++||++.+.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.++| |+||
T Consensus 14 ~dg~iD~~~l~~lv~~li--------------------~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpv 72 (297)
T 2rfg_A 14 INGQVDEKALAGLVDWQI--------------------KHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG-RVPV 72 (297)
T ss_dssp ETTEECHHHHHHHHHHHH--------------------HTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCB
T ss_pred CCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC-CCeE
Confidence 677777777777777772 2455688999999999999999999999999999999 9999
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 73 iaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 143 (297)
T 2rfg_A 73 IAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRP-SQEGLYQHFKMVHDAI-DIPIIVYNIPPRAVVDIK 143 (297)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred EEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCccccCCCCC
Confidence 9999999999999999999999999999999999999 9999999999999999 899999999999999885
No 20
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=100.00 E-value=1.3e-33 Score=256.62 Aligned_cols=132 Identities=16% Similarity=0.215 Sum_probs=120.9
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.++|
T Consensus 17 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g 76 (309)
T 3fkr_A 17 PTTFADTGDLDLASQKRAVDFMI--------------------DAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG 76 (309)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred eCCCCcCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC
Confidence 445 577888888888777773 2455689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC---CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF---FTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTL 238 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y---~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~L 238 (239)
|+|||+|++++||+++++++++|+++|||++|+.|||| +++ +++++++||++|++++ ++||||||+|. ||++|
T Consensus 77 -rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~-tg~~l 152 (309)
T 3fkr_A 77 -RVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRV-PEAQIFEFYARVSDAI-AIPIMVQDAPA-SGTAL 152 (309)
T ss_dssp -SSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCC-CHHHHHHHHHHHHHHC-SSCEEEEECGG-GCCCC
T ss_pred -CCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCCC-CCCCC
Confidence 99999999999999999999999999999999999999 688 9999999999999999 89999999997 99988
Q ss_pred C
Q psy9602 239 K 239 (239)
Q Consensus 239 s 239 (239)
+
T Consensus 153 ~ 153 (309)
T 3fkr_A 153 S 153 (309)
T ss_dssp C
T ss_pred C
Confidence 5
No 21
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=100.00 E-value=7e-34 Score=262.30 Aligned_cols=133 Identities=20% Similarity=0.317 Sum_probs=123.6
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.+++
T Consensus 40 vTPF~~dg~ID~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g 99 (343)
T 2v9d_A 40 STIFTADGQLDKPGTAALIDDLI--------------------KAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR 99 (343)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 455 578888888888888873 2456689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
++|||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 100 -rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~~-s~~~l~~~f~~VA~a~-~lPiilYn~P~~tg~~l~ 174 (343)
T 2v9d_A 100 -RVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWKV-SEANLIRYFEQVADSV-TLPVMLYNFPALTGQDLT 174 (343)
T ss_dssp -SSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSCC-CHHHHHHHHHHHHHTC-SSCEEEEECHHHHSSCCC
T ss_pred -CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeCchhcCcCCC
Confidence 99999999999999999999999999999999999999999 9999999999999999 899999999999999885
No 22
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=100.00 E-value=7.6e-34 Score=257.68 Aligned_cols=129 Identities=21% Similarity=0.303 Sum_probs=119.4
Q ss_pred ccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEE
Q psy9602 88 VVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVM 167 (239)
Q Consensus 88 ~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVI 167 (239)
+++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++ |+|||
T Consensus 27 dg~iD~~~l~~lv~~li--------------------~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvpVi 85 (306)
T 1o5k_A 27 NGELDLESYERLVRYQL--------------------ENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG-KIPVI 85 (306)
T ss_dssp TTEECHHHHHHHHHHHH--------------------HTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT-SSCEE
T ss_pred CCCcCHHHHHHHHHHHH--------------------HcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC-CCeEE
Confidence 66777777777777762 2455688999999999999999999999999999999 99999
Q ss_pred EecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 168 VQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 168 aGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 86 aGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 155 (306)
T 1o5k_A 86 VGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKP-TQEGLYQHYKYISERT-DLGIVVYNVPGRTGVNVL 155 (306)
T ss_dssp EECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSCC-CHHHHHHHHHHHHTTC-SSCEEEEECHHHHSCCCC
T ss_pred EcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCC
Confidence 999999999999999999999999999999999999 9999999999999999 899999999999999885
No 23
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=100.00 E-value=9.6e-34 Score=256.24 Aligned_cols=130 Identities=21% Similarity=0.333 Sum_probs=118.4
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc-CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCce
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA-PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFT 165 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~-gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvp 165 (239)
++++||++++.++++|+ ++ |+.|++++|||||+++||.+||+++++.+++.++|.|+|
T Consensus 21 ~dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvp 79 (301)
T 3m5v_A 21 KNGKVDEQSYARLIKRQ---------------------IENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVK 79 (301)
T ss_dssp ETTEECHHHHHHHHHHH---------------------HHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCE
T ss_pred CCCCCCHHHHHHHHHHH---------------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCe
Confidence 56666666666666666 44 556889999999999999999999999999998764699
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
||+|+++++|+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 80 viaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 151 (301)
T 3m5v_A 80 VLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNKP-TQQGLYEHYKAIAQSV-DIPVLLYNVPGRTGCEIS 151 (301)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEeCchhhCcCCC
Confidence 99999999999999999999999999999999999999 9999999999999999 899999999999999885
No 24
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.9e-33 Score=256.05 Aligned_cols=133 Identities=19% Similarity=0.246 Sum_probs=124.4
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+++
T Consensus 16 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g 75 (311)
T 3h5d_A 16 ITPFHEDGSINFDAIPALIEHLL--------------------AHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNG 75 (311)
T ss_dssp CCCBCTTSSBCTTHHHHHHHHHH--------------------HTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCS
T ss_pred ecCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 455 688999999998888883 2456689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCC-CEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNV-HAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGA-daVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
++|||+|++++||+++++++++|+++|+ |++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 76 -rvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 151 (311)
T 3h5d_A 76 -RVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNKP-SQEGMYQHFKAIADAS-DLPIIIYNIPGRVVVELT 151 (311)
T ss_dssp -SSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSCC-CHHHHHHHHHHHHHSC-SSCEEEEECHHHHSSCCC
T ss_pred -CCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEecccccCCCCC
Confidence 9999999999999999999999999997 9999999999999 9999999999999999 899999999999999885
No 25
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=100.00 E-value=9e-34 Score=257.30 Aligned_cols=129 Identities=18% Similarity=0.244 Sum_probs=118.3
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc-CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCce
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA-PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFT 165 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~-gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvp 165 (239)
++++||++.+.++++|+ ++ |+.|++++|||||+++||.+||+++++.+++.+++ ++|
T Consensus 28 ~dg~iD~~~l~~lv~~l---------------------i~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g-r~p 85 (307)
T 3s5o_A 28 ATAEVDYGKLEENLHKL---------------------GTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPK-NRL 85 (307)
T ss_dssp TTSCBCHHHHHHHHHHH---------------------TTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCT-TSE
T ss_pred CCCCcCHHHHHHHHHHH---------------------HHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCC-CCc
Confidence 56677777776666666 45 45578999999999999999999999999999999 999
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC--CCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT--PASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~--~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
||+|+++++|+++++++++|+++|||++|+.||||++ + +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 86 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~-s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 159 (307)
T 3s5o_A 86 LLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGRM-SSAALIHHYTKVADLS-PIPVVLYSVPANTGLDLP 159 (307)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTTGGGC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred EEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcCCCCC-CHHHHHHHHHHHHhhc-CCCEEEEeCCcccCCCCC
Confidence 9999999999999999999999999999999999996 6 9999999999999999 899999999999999885
No 26
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=6e-34 Score=256.35 Aligned_cols=129 Identities=20% Similarity=0.371 Sum_probs=119.7
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc-CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCce
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA-PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFT 165 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~-gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvp 165 (239)
++++||++.+.++++|+ ++ |+.|++++|||||+++||.+||+++++.+++.+++ |+|
T Consensus 14 ~dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~p 71 (292)
T 2vc6_A 14 ADDRIDEVALHDLVEWQ---------------------IEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG-RVP 71 (292)
T ss_dssp ETTEECHHHHHHHHHHH---------------------HHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSC
T ss_pred CCCCcCHHHHHHHHHHH---------------------HHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCc
Confidence 56777777777777766 44 55688999999999999999999999999999999 999
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
||+|++++||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~ia~a~-~lPiilYn~P~~tg~~l~ 143 (292)
T 2vc6_A 72 VIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKP-TQEGIYQHFKAIDAAS-TIPIIVYNIPGRSAIEIH 143 (292)
T ss_dssp BEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred EEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEeCccccCcCCC
Confidence 99999999999999999999999999999999999999 9999999999999999 899999999999999885
No 27
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=99.98 E-value=7.5e-33 Score=252.77 Aligned_cols=129 Identities=19% Similarity=0.317 Sum_probs=112.1
Q ss_pred ccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcC-CCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE
Q psy9602 88 VVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAP-IIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV 166 (239)
Q Consensus 88 ~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~g-g~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpV 166 (239)
+++||++++.++++|+ ++. +.|++++|||||+++||.+||+++++.+++.+++ ++||
T Consensus 26 dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g-rvpv 83 (318)
T 3qfe_A 26 TDTLDLASQERYYAYL---------------------ARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP-DFPI 83 (318)
T ss_dssp TTEECHHHHHHHHHHH---------------------HTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT-TSCE
T ss_pred CCCCCHHHHHHHHHHH---------------------HHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC-CCcE
Confidence 5666666666666665 554 4578999999999999999999999999999999 9999
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCc-cccCC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT-PASVEDLVDYLRDVGEAAPATPLFYYHIPMFT-RVTLK 239 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~-~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~T-G~~Ls 239 (239)
|+|++++||+++++++++|+++|||++|+.||+||. +.+++++++||++|++++ ++||||||+|.+| |++|+
T Consensus 84 iaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~~~~~l~~~f~~ia~a~-~lPiilYn~P~~t~g~~l~ 157 (318)
T 3qfe_A 84 MAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKATTPPVIKSFFDDVSCQS-PLPVVIYNFPGVCNGIDLD 157 (318)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC---CCCHHHHHHHHHHHHHHC-SSCEEEEECCC----CCCC
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCCHHHHHHHHHHHHhhC-CCCEEEEeCCcccCCCCCC
Confidence 999999999999999999999999999999998885 328999999999999999 8999999999997 99885
No 28
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=99.97 E-value=5e-33 Score=252.98 Aligned_cols=129 Identities=19% Similarity=0.250 Sum_probs=116.2
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV 166 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpV 166 (239)
++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.+ | ++||
T Consensus 22 ~dg~iD~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g-rvpV 79 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYA--------------------EVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K-SMQV 79 (313)
T ss_dssp TTSCBCHHHHHHHHHHHH--------------------HTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T-TSEE
T ss_pred CCCCcCHHHHHHHHHHHH--------------------HCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C-CCcE
Confidence 567777777777777662 24556899999999999999999999999999999 8 9999
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC-CCcEEEEeCCCCccccCC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP-ATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp-dLPIiLYN~P~~TG~~Ls 239 (239)
|+|++++||+++++++++|+++|||++|+.||| |.+ +++++++||++|+++++ ++||||||+|.+||++|+
T Consensus 80 iaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~-~~~-s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~ 151 (313)
T 3dz1_A 80 IVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPP-SLR-TDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMT 151 (313)
T ss_dssp EEECCCSSHHHHHHHHHHHHHHTCSEEEECCCT-TCC-SHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCC
T ss_pred EEecCCCCHHHHHHHHHHHHHcCCCEEEECCCC-CCC-CHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCC
Confidence 999999999999999999999999999999998 557 99999999999999993 399999999999999885
No 29
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=99.97 E-value=1.5e-32 Score=247.12 Aligned_cols=130 Identities=22% Similarity=0.363 Sum_probs=119.0
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.++
T Consensus 8 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~- 66 (288)
T 2nuw_A 8 ITPFDKQGKVNVDALKTHAKNLL--------------------EKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH- 66 (288)
T ss_dssp CCCBCTTSCBCHHHHHHHHHHHH--------------------HTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS-
T ss_pred ecCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-
Confidence 455 678888888888888873 245568899999999999999999999999999875
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT-PASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~-~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
+ ||+|++++||+++++++++|+++|||++|+.||||++ + +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 67 -g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 140 (288)
T 2nuw_A 67 -K--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFPRL-PEKFLAKYYEEIARIS-SHSLYIYNYPAATGYDIP 140 (288)
T ss_dssp -C--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSCSC-CHHHHHHHHHHHHHHC-CSCEEEEECHHHHSCCCC
T ss_pred -C--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEECchHhCcCCC
Confidence 3 9999999999999999999999999999999999999 9 9999999999999999 899999999999999885
No 30
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=99.97 E-value=2.5e-32 Score=246.13 Aligned_cols=130 Identities=25% Similarity=0.408 Sum_probs=118.8
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||.++++.+++.++
T Consensus 8 vTPf~~dg~iD~~~l~~lv~~li--------------------~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~- 66 (293)
T 1w3i_A 8 ITPFTKDNRIDKEKLKIHAENLI--------------------RKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN- 66 (293)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS-
T ss_pred eCCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC-
Confidence 455 678888888888888773 245568999999999999999999999999999875
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT-PASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~-~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
+ ||+|++++||+++++++++|+++|||++|+.||||++ + +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 67 -g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 140 (293)
T 1w3i_A 67 -K--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYPRM-SEKHLVKYFKTLCEVS-PHPVYLYNYPTATGKDID 140 (293)
T ss_dssp -C--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECCCSCSSC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSCCCC
T ss_pred -C--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCC-CHHHHHHHHHHHHhhC-CCCEEEEECchhhCcCCC
Confidence 3 9999999999999999999999999999999999999 9 9999999999999999 899999999999999885
No 31
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=5.6e-32 Score=250.00 Aligned_cols=129 Identities=18% Similarity=0.252 Sum_probs=117.9
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|++ -.|+.|++++|||||+++||.+||+++++. .+++
T Consensus 35 vTPF~~dg~ID~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~---~~~g 91 (344)
T 2hmc_A 35 MTPCRQDRTPDFDALVRKGKELI--------------------ADGMSAVVYCGSMGDWPLLTDEQRMEGVER---LVKA 91 (344)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCCCEEESSGGGTGGGSCHHHHHHHHHH---HHHT
T ss_pred eCCCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEeCccCcChhhCCHHHHHHHHHH---HhCC
Confidence 455 578888888888888873 245668999999999999999999999999 5677
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCHHHHHHHHHHHHh-hCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT-PASVEDLVDYLRDVGE-AAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~-~~s~e~iv~yf~~Vae-atpdLPIiLYN~P~~TG~~Ls 239 (239)
++|||+|+++++|+++|+++++|+++|||++|+.||||++ + +++++++||++|++ ++ ++||||||+| +||++|+
T Consensus 92 -rvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~IA~aa~-~lPiilYn~P-~tg~~l~ 167 (344)
T 2hmc_A 92 -GIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVLSRGS-VIAAQKAHFKAILSAAP-EIPAVIYNSP-YYGFATR 167 (344)
T ss_dssp -TCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCSSSTT-CHHHHHHHHHHHHHHST-TSCEEEEEBG-GGTBCCC
T ss_pred -CCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCccCCCC-CHHHHHHHHHHHHhhCC-CCcEEEEecC-ccCCCcC
Confidence 9999999999999999999999999999999999999999 8 99999999999999 78 8999999999 9999885
No 32
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=99.97 E-value=4.5e-32 Score=243.51 Aligned_cols=125 Identities=29% Similarity=0.395 Sum_probs=114.4
Q ss_pred ccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc-CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE
Q psy9602 88 VVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA-PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV 166 (239)
Q Consensus 88 ~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~-gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpV 166 (239)
+++||++.+.++++|+ ++ |+.|++++|||||+++||.+||+++++.+++.++| |
T Consensus 13 dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g----v 67 (286)
T 2r91_A 13 GGRLDPELFANHVKNI---------------------TSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR----V 67 (286)
T ss_dssp TTEECHHHHHHHHHHH---------------------HHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS----E
T ss_pred CCccCHHHHHHHHHHH---------------------HHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC----E
Confidence 6677777777777766 44 55688999999999999999999999999998753 9
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT-PASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~-~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|++++||+++++++++|+++|||++|+.||||++ + +++++++||++|++++ ++||||||+|.+||++|+
T Consensus 68 i~Gvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~-s~~~l~~~f~~va~a~-~lPiilYn~P~~tg~~l~ 139 (286)
T 2r91_A 68 IVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRL-SERQIAKYFRDLCSAV-SIPVFLYNYPAAVGRDVD 139 (286)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCSSTTC-CHHHHHHHHHHHHHHC-SSCEEEEECHHHHSSCCC
T ss_pred EEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCCCC-CHHHHHHHHHHHHHhc-CCCEEEEeChhhcCCCCC
Confidence 999999999999999999999999999999999999 9 9999999999999999 899999999999999885
No 33
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=99.97 E-value=8.8e-32 Score=250.76 Aligned_cols=131 Identities=19% Similarity=0.216 Sum_probs=120.5
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.++|
T Consensus 68 vTPF~~dg~ID~~al~~lv~~li--------------------~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g 127 (360)
T 4dpp_A 68 KTPYLPDGRFDLEAYDDLVNIQI--------------------QNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG 127 (360)
T ss_dssp CCCBCTTSSBCHHHHHHHHHHHH--------------------HTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT
T ss_pred eCcCCCCCCcCHHHHHHHHHHHH--------------------HcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC
Confidence 555 678888888888888773 2455689999999999999999999999999999999
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
|+|||+|+++++|+++++++++|+++|||++|+.||||+++ +++++++||++|+++ +||||||+|.+||++|+
T Consensus 128 -rvpViaGvg~~st~eai~la~~A~~~Gadavlvv~PyY~k~-sq~gl~~hf~~IA~a---~PiilYNiP~rTg~~ls 200 (360)
T 4dpp_A 128 -SIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYYGKT-SIEGLIAHFQSVLHM---GPTIIYNVPGRTGQDIP 200 (360)
T ss_dssp -TSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSCC-CHHHHHHHHHTTGGG---SCEEEEECHHHHSCCCC
T ss_pred -CCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHh---CCEEEEeCCcccCCCCC
Confidence 99999999999999999999999999999999999999999 999999999999996 59999999999999885
No 34
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=99.97 E-value=3.9e-31 Score=240.84 Aligned_cols=124 Identities=23% Similarity=0.205 Sum_probs=113.5
Q ss_pred cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhc-CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCce
Q psy9602 87 EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMA-PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFT 165 (239)
Q Consensus 87 ~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~-gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvp 165 (239)
++++||++++.++++|+ ++ |+.|++++|||||+++||.+||+++++.+++.+++ |+|
T Consensus 26 ~dg~iD~~~l~~lv~~l---------------------i~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g-rvp 83 (314)
T 3d0c_A 26 GTREIDWKGLDDNVEFL---------------------LQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG-RAT 83 (314)
T ss_dssp TTCCBCHHHHHHHHHHH---------------------HHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT-SSE
T ss_pred CCCCCCHHHHHHHHHHH---------------------HHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC-CCe
Confidence 35677777777777766 44 45678999999999999999999999999999999 999
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
||+|+++ ||+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++|||||| +||+ |+
T Consensus 84 ViaGvg~-st~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn---~tg~-l~ 150 (314)
T 3d0c_A 84 VVAGIGY-SVDTAIELGKSAIDSGADCVMIHQPVHPYI-TDAGAVEYYRNIIEAL-DAPSIIYF---KDAH-LS 150 (314)
T ss_dssp EEEEECS-SHHHHHHHHHHHHHTTCSEEEECCCCCSCC-CHHHHHHHHHHHHHHS-SSCEEEEE---CCTT-SC
T ss_pred EEecCCc-CHHHHHHHHHHHHHcCCCEEEECCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEe---CCCC-cC
Confidence 9999999 999999999999999999999999999999 9999999999999999 79999999 8888 75
No 35
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=99.96 E-value=1.1e-30 Score=237.76 Aligned_cols=123 Identities=19% Similarity=0.135 Sum_probs=113.5
Q ss_pred ccc--c-ccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhc
Q psy9602 84 AHG--E-VVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAK 160 (239)
Q Consensus 84 ~~p--~-~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~ 160 (239)
++| + +++||++++.++++|++ -.|+.|++++|||||+++||.+||+++++.+++.++
T Consensus 20 vTPf~~~dg~iD~~~l~~lv~~li--------------------~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~ 79 (316)
T 3e96_A 20 ITPFRKSDGSIDWHHYKETVDRIV--------------------DNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVH 79 (316)
T ss_dssp CCCBCTTTCCBCHHHHHHHHHHHH--------------------TTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHT
T ss_pred eCCccCCCCCCCHHHHHHHHHHHH--------------------HcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhC
Confidence 455 6 78888888888888873 245567899999999999999999999999999999
Q ss_pred CCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 161 THGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 161 G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
| |+|||+|+++ +|+++++++++|+++|||++|+.||||+++ +++++++||++|++++ ++||||||+
T Consensus 80 g-rvpViaGvg~-~t~~ai~la~~A~~~Gadavlv~~P~y~~~-s~~~l~~~f~~va~a~-~lPiilYn~ 145 (316)
T 3e96_A 80 G-RALVVAGIGY-ATSTAIELGNAAKAAGADAVMIHMPIHPYV-TAGGVYAYFRDIIEAL-DFPSLVYFK 145 (316)
T ss_dssp T-SSEEEEEECS-SHHHHHHHHHHHHHHTCSEEEECCCCCSCC-CHHHHHHHHHHHHHHH-TSCEEEEEC
T ss_pred C-CCcEEEEeCc-CHHHHHHHHHHHHhcCCCEEEEcCCCCCCC-CHHHHHHHHHHHHHhC-CCCEEEEeC
Confidence 9 9999999997 999999999999999999999999999999 9999999999999999 799999997
No 36
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=99.96 E-value=2.9e-31 Score=238.13 Aligned_cols=127 Identities=24% Similarity=0.330 Sum_probs=116.0
Q ss_pred ccc--cccccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcC
Q psy9602 84 AHG--EVVMIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKT 161 (239)
Q Consensus 84 ~~p--~~~~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G 161 (239)
++| ++++||++.+.++++|+ ++.+.|++++|||||+++||.+||.++++.+++
T Consensus 7 vTPf~~dg~iD~~~l~~lv~~l---------------------i~~v~gl~v~GttGE~~~Ls~~Er~~v~~~~~~---- 61 (283)
T 2pcq_A 7 PTPFDREGRLDEEAFRELAQAL---------------------EPLVDGLLVYGSNGEGVHLTPEERARGLRALRP---- 61 (283)
T ss_dssp CCCBCTTCCBCHHHHHHHHHHH---------------------GGGSSCCEETCTTTTGGGSCHHHHHHHHHTCCC----
T ss_pred eCCCCCCCCcCHHHHHHHHHHH---------------------HhhCCEEEECCcCcCchhcCHHHHHHHHHHHHh----
Confidence 456 68899999998888888 344668999999999999999999999999997
Q ss_pred CCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCccccCC
Q psy9602 162 HGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFTRVTLK 239 (239)
Q Consensus 162 ~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~TG~~Ls 239 (239)
++|||+|++++||+++++++++|+++|||++|+.||||+++.+++++++||++|++ ++||||||+|.+||++|+
T Consensus 62 -rvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~~l~~~f~~va~---~lPiilYn~P~~tg~~l~ 135 (283)
T 2pcq_A 62 -RKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYYHGSLGAGLLRYYEALAE---KMPLFLYHVPQNTKVDLP 135 (283)
T ss_dssp -SSCCEEEECCSSHHHHHHHHHHHHHHTCSEEEECCCCTTGGGTTTHHHHHHHHHHH---HSCEEEEECHHHHCCCCC
T ss_pred -CCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEecCCcCCCCCCHHHHHHHHHHHhc---CCCEEEEeCccccCcCCC
Confidence 58999999999999999999999999999999999999875478999999999999 599999999999999885
No 37
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=96.99 E-value=0.0044 Score=55.34 Aligned_cols=107 Identities=11% Similarity=0.063 Sum_probs=83.4
Q ss_pred HHhhhcCCCC-EEEeccccCC-----cCCCHHHHHHHHHHHHHHhcCCCceEEEecC---------CCCHHHHHHHHHHH
Q psy9602 121 ITLRMAPIID-QMVNGTTGEG-----VSMTTAERKLNLEAWMTEAKTHGFTVMVQIG---------GTCFQEVVELAKHA 185 (239)
Q Consensus 121 v~~~~~gg~g-lvV~GstGE~-----~sLT~eER~~li~~vve~~~G~rvpVIaGVg---------~~St~eAIelar~A 185 (239)
++..++.|.. +.++.+++|. ..+|.+|-.+.++.+++.+....+.|-+.++ ..+.+.++++++.+
T Consensus 89 i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~ 168 (302)
T 2ftp_A 89 FEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVAREL 168 (302)
T ss_dssp HHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHH
T ss_pred HHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHH
Confidence 3444555555 5577788875 4589999999999999887764566643322 25789999999999
Q ss_pred HhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 186 ESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 186 ~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
.+.|+|.+.+..-+.+ . ++.++.+.++.|.+..|++||.++-
T Consensus 169 ~~~G~d~i~l~DT~G~-~-~P~~~~~lv~~l~~~~~~~~l~~H~ 210 (302)
T 2ftp_A 169 QQMGCYEVSLGDTIGV-G-TAGATRRLIEAVASEVPRERLAGHF 210 (302)
T ss_dssp HHTTCSEEEEEESSSC-C-CHHHHHHHHHHHTTTSCGGGEEEEE
T ss_pred HHcCCCEEEEeCCCCC-c-CHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 9999999998876654 3 7899999999999999779998874
No 38
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=96.73 E-value=0.016 Score=51.44 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=83.8
Q ss_pred HHhhhcCCCC-EEEeccccCC-----cCCCHHHHHHHHHHHHHHhcCCCceEEEecC---------CCCHHHHHHHHHHH
Q psy9602 121 ITLRMAPIID-QMVNGTTGEG-----VSMTTAERKLNLEAWMTEAKTHGFTVMVQIG---------GTCFQEVVELAKHA 185 (239)
Q Consensus 121 v~~~~~gg~g-lvV~GstGE~-----~sLT~eER~~li~~vve~~~G~rvpVIaGVg---------~~St~eAIelar~A 185 (239)
++...+.|.. +-++++++|. ...|.+|-.+.+..+++.++....+|.+.+. ..+.+..+++++.+
T Consensus 86 i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 165 (298)
T 2cw6_A 86 FEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKF 165 (298)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHH
Confidence 4444555655 4588888887 4678899888888888876654567765443 34799999999999
Q ss_pred HhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 186 ESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 186 ~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
.++||+.+.+..-..+ . +++++.+.++.+.+..|++||-++-..
T Consensus 166 ~~~Ga~~i~l~DT~G~-~-~P~~~~~lv~~l~~~~~~~~i~~H~Hn 209 (298)
T 2cw6_A 166 YSMGCYEISLGDTIGV-G-TPGIMKDMLSAVMQEVPLAALAVHCHD 209 (298)
T ss_dssp HHTTCSEEEEEETTSC-C-CHHHHHHHHHHHHHHSCGGGEEEEEBC
T ss_pred HHcCCCEEEecCCCCC-c-CHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 9999999988865543 2 789999999999999977888886443
No 39
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=96.63 E-value=0.016 Score=51.18 Aligned_cols=107 Identities=22% Similarity=0.124 Sum_probs=80.7
Q ss_pred HHhhhcCCCC-EEEeccccCCc-----CCCHHHHHHHHHHHHHHhcCCCceEEE--ec-------CCCCHHHHHHHHHHH
Q psy9602 121 ITLRMAPIID-QMVNGTTGEGV-----SMTTAERKLNLEAWMTEAKTHGFTVMV--QI-------GGTCFQEVVELAKHA 185 (239)
Q Consensus 121 v~~~~~gg~g-lvV~GstGE~~-----sLT~eER~~li~~vve~~~G~rvpVIa--GV-------g~~St~eAIelar~A 185 (239)
++..++.|.. +.+..+++|.+ .+|.+|-.+.++.+++.+....++|.+ +. +..+.++++++++.+
T Consensus 85 i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~ 164 (295)
T 1ydn_A 85 YEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQL 164 (295)
T ss_dssp HHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHH
Confidence 4444555554 55665555433 578999988888888877654577763 32 245899999999999
Q ss_pred HhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 186 ESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 186 ~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
.+.|+|.+.+...... . +++++.+.++.|.+..|++|+.++-
T Consensus 165 ~~~G~d~i~l~Dt~G~-~-~P~~~~~lv~~l~~~~~~~~l~~H~ 206 (295)
T 1ydn_A 165 FSLGCHEVSLGDTIGR-G-TPDTVAAMLDAVLAIAPAHSLAGHY 206 (295)
T ss_dssp HHHTCSEEEEEETTSC-C-CHHHHHHHHHHHHTTSCGGGEEEEE
T ss_pred HhcCCCEEEecCCCCC-c-CHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 9999999999977665 3 7899999999999999558888774
No 40
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=96.45 E-value=0.026 Score=51.27 Aligned_cols=106 Identities=11% Similarity=0.029 Sum_probs=81.7
Q ss_pred HHhhhcCCCCE-EEeccccCC-----cCCCHHHHHHHHHHHHHHhcCCCceEEEecCC------CCHHHHHHHHHHHHhC
Q psy9602 121 ITLRMAPIIDQ-MVNGTTGEG-----VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG------TCFQEVVELAKHAESL 188 (239)
Q Consensus 121 v~~~~~gg~gl-vV~GstGE~-----~sLT~eER~~li~~vve~~~G~rvpVIaGVg~------~St~eAIelar~A~~a 188 (239)
++..++.+.+. -++.+++|. ...|.+|-.+.+..+++.++.....|.+++.. .+.+..+++++.+.++
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKE 181 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTS
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHc
Confidence 44445555554 488888886 46788888888888887766545677766544 4578899999999999
Q ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 189 NVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 189 GAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
||+.+.+..-.... +++++.+.++.|.+..|++||-++
T Consensus 182 Ga~~i~l~DT~G~~--~P~~v~~lv~~l~~~~p~~~i~~H 219 (337)
T 3ble_A 182 HIERIFLPDTLGVL--SPEETFQGVDSLIQKYPDIHFEFH 219 (337)
T ss_dssp CCSEEEEECTTCCC--CHHHHHHHHHHHHHHCTTSCEEEE
T ss_pred CCCEEEEecCCCCc--CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999887655432 789999999999999988888775
No 41
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=96.41 E-value=0.024 Score=51.05 Aligned_cols=106 Identities=12% Similarity=0.088 Sum_probs=80.3
Q ss_pred HHhhhcCCCC-EEEeccccCC-----cCCCHHHHHHHHHHHHHHhcCCCceEEEecC---------CCCHHHHHHHHHHH
Q psy9602 121 ITLRMAPIID-QMVNGTTGEG-----VSMTTAERKLNLEAWMTEAKTHGFTVMVQIG---------GTCFQEVVELAKHA 185 (239)
Q Consensus 121 v~~~~~gg~g-lvV~GstGE~-----~sLT~eER~~li~~vve~~~G~rvpVIaGVg---------~~St~eAIelar~A 185 (239)
++..++.+.. +-++.+++|. ...|.+|-.+.++.+++.++.....|.+.+. ..+.+..+++++.+
T Consensus 87 i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (307)
T 1ydo_A 87 LENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEAL 166 (307)
T ss_dssp HHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHH
T ss_pred HHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHH
Confidence 4444555555 4588888875 5678999888888888776653456643332 25789999999999
Q ss_pred HhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 186 ESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 186 ~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++|++.+.+..-..+ . +++++.+.++.|.+..|++||-++
T Consensus 167 ~~~Ga~~i~l~DT~G~-~-~P~~v~~lv~~l~~~~~~~~l~~H 207 (307)
T 1ydo_A 167 FEFGISELSLGDTIGA-A-NPAQVETVLEALLARFPANQIALH 207 (307)
T ss_dssp HHHTCSCEEEECSSCC-C-CHHHHHHHHHHHHTTSCGGGEEEE
T ss_pred HhcCCCEEEEcCCCCC-c-CHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9999999988876543 2 789999999999999877888776
No 42
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=96.27 E-value=0.069 Score=50.98 Aligned_cols=95 Identities=17% Similarity=0.240 Sum_probs=72.9
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecCC-------------------------------CCHHHHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIGG-------------------------------TCFQEVVE 180 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg~-------------------------------~St~eAIe 180 (239)
+|+.+--...+.+|-.+-|+.++++.+ |...-|++=+-+ .+++++|+
T Consensus 196 CGH~~gk~lv~~~e~v~rI~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~ 275 (439)
T 3i4e_A 196 CGHMGGKVLVPTREAVAKLTAARLAADVMGTPTVLVARTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAIS 275 (439)
T ss_dssp CSTTCBCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHH
T ss_pred cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCcccccccccccccccchhhcccCcccccccccCCHHHHHH
Confidence 367666778899998888888887652 214555554433 56999999
Q ss_pred HHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC-CCCc
Q psy9602 181 LAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI-PMFT 234 (239)
Q Consensus 181 lar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~-P~~T 234 (239)
.++.+.+ |||.|.+-|+. + +.+++..+-+.|....| .+++.||. |.++
T Consensus 276 Ra~AY~~-GAD~if~E~~~---~-~~eei~~f~~~v~~~~P-~~~l~~~~sPsfn 324 (439)
T 3i4e_A 276 RGLAYAP-YADLIWCETGK---P-DLEYAKKFAEAIHKQFP-GKLLSYNCSPSFN 324 (439)
T ss_dssp HHHHHTT-TCSEEEECCSS---C-CHHHHHHHHHHHHHHST-TCEEEEECCSSSC
T ss_pred HHHHHHh-hCCEEEecCCC---C-CHHHHHHHHHHhcccCC-ceEEeeCCCCCCc
Confidence 9999998 99999997642 4 88999999999988785 78888987 6554
No 43
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=96.07 E-value=0.082 Score=50.40 Aligned_cols=94 Identities=19% Similarity=0.226 Sum_probs=72.1
Q ss_pred ccccCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecCC-------------------------------CCHHHHHHH
Q psy9602 135 GTTGEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIGG-------------------------------TCFQEVVEL 181 (239)
Q Consensus 135 GstGE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg~-------------------------------~St~eAIel 181 (239)
|+.+.-...+.+|-.+-|+.++++.+ +..+-|++=+-+ .+++++|+.
T Consensus 197 Gh~~gk~lv~~~e~~~rI~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~R 276 (435)
T 3lg3_A 197 GHMGGKVLVPTQEAIQKLVAARLAADVLGVPTLLIARTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISR 276 (435)
T ss_dssp STTCBCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHH
T ss_pred CCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEEcCCccccccccccccccchhhcccccccccccccCCHHHHHHH
Confidence 66666677899998888888877652 214556654443 679999999
Q ss_pred HHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC-CCCc
Q psy9602 182 AKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI-PMFT 234 (239)
Q Consensus 182 ar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~-P~~T 234 (239)
++.+.+ |||.|.+-|+ .+ +.+++..+-+.|....| .+++.||. |.++
T Consensus 277 a~AY~~-GAD~if~E~~---~~-~~~ei~~f~~~v~~~~P-~~~La~~~sPsfn 324 (435)
T 3lg3_A 277 GLAYAP-YADLVWCETS---TP-DLALAKRFADAVHAQFP-GKLLAYNCSPSFN 324 (435)
T ss_dssp HHHHGG-GCSEEEECCS---SC-CHHHHHHHHHHHHHHST-TCEEEEECCSSSC
T ss_pred HHHHHc-cCCEEEecCC---CC-CHHHHHHHHHHhccccC-CeEEEeCCCCCcc
Confidence 999999 9999999764 24 88999999999988785 77888887 6553
No 44
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=96.00 E-value=0.068 Score=50.93 Aligned_cols=95 Identities=19% Similarity=0.226 Sum_probs=70.0
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecCC---------------------------------CCHHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIGG---------------------------------TCFQEV 178 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg~---------------------------------~St~eA 178 (239)
+|+.+--...+.+|-.+=|++++++.. +...-||+=+-+ .+++++
T Consensus 189 CGH~~gk~lvp~ee~v~rI~AAr~A~~~~g~d~vIiARTDA~~a~l~~s~~d~rd~~fl~g~g~r~~eG~y~~~~gld~A 268 (433)
T 3eol_A 189 CGHLGGKVLIPTAAHIRNLNAARLAADVMGTPTLIVARTDAEAAKLLTSDIDERDQPFVDYEAGRTAEGFYQVKNGIEPC 268 (433)
T ss_dssp -----CCEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECTTTCCEESCCCSTTTGGGBCSSSCBCTTCCEEBCCSHHHH
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCEEEEEEcCCccccccccCcccccccceeccCcccccccccccCCHHHH
Confidence 356666677899998888888887764 325556664432 579999
Q ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC-CCCc
Q psy9602 179 VELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI-PMFT 234 (239)
Q Consensus 179 Ielar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~-P~~T 234 (239)
|+.++.+.+ |||.|.+-++ .+ +.+++..+-+.|....| .+++.||. |.++
T Consensus 269 I~Ra~AY~~-GAD~If~e~~---~~-~~eei~~f~~~v~~~~P-~~~L~~~~sPsfn 319 (433)
T 3eol_A 269 IARAIAYAP-YCDLIWMETS---KP-DLAQARRFAEAVHKAHP-GKLLAYNCSPSFN 319 (433)
T ss_dssp HHHHHHHGG-GCSEEEECCS---SC-CHHHHHHHHHHHHHHST-TCCEEEECCSSSC
T ss_pred HHHHHHHHh-cCCEEEEeCC---CC-CHHHHHHHHHHhcccCC-CcccccCCCCCCc
Confidence 999999999 9999999764 34 88999999999988785 77788887 5543
No 45
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=95.92 E-value=0.07 Score=48.02 Aligned_cols=103 Identities=9% Similarity=0.005 Sum_probs=72.2
Q ss_pred HHhhhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC--------CCH-HHHHHHHHHHHhCCC
Q psy9602 121 ITLRMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG--------TCF-QEVVELAKHAESLNV 190 (239)
Q Consensus 121 v~~~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~--------~St-~eAIelar~A~~aGA 190 (239)
++..++.|...+ +++..+ ...+..|..+.++.+++.+...++|+++-+.. .+. +-..+.++.+.++|+
T Consensus 114 ve~a~~~GAdaV~vlv~~~--~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGa 191 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWR--SDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGA 191 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEC--TTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHcCCCEEEEEEEcC--CCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCC
Confidence 566677777654 666555 33445888888888888877667998885531 223 334445999999999
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc-EEE
Q psy9602 191 HAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP-LFY 227 (239)
Q Consensus 191 daVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP-IiL 227 (239)
|.+=+-+|.+-.. +.+++.+.++.....+ ++| |++
T Consensus 192 D~iKv~~~~~~~g-~~~~~~~vv~~~~~~~-~~P~Vv~ 227 (304)
T 1to3_A 192 DLYKVEMPLYGKG-ARSDLLTASQRLNGHI-NMPWVIL 227 (304)
T ss_dssp SEEEECCGGGGCS-CHHHHHHHHHHHHHTC-CSCEEEC
T ss_pred CEEEeCCCcCCCC-CHHHHHHHHHhccccC-CCCeEEE
Confidence 9988888765323 6778877777777768 789 653
No 46
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.76 E-value=0.051 Score=49.37 Aligned_cols=82 Identities=17% Similarity=0.159 Sum_probs=63.3
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC---CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG---TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLV 210 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~---~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv 210 (239)
+|+.+.-...+.+|..+-|+.++++ +. ...|++=+-+ .+.+++|+.++.++++|||++++-.+ + +.++
T Consensus 132 cGh~~gk~l~~~~e~~~rI~Aa~~A-~~-~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~----~-~~~~-- 202 (305)
T 3ih1_A 132 CGHLNGKKLVTTEELVQKIKAIKEV-AP-SLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEAL----Q-SEEE-- 202 (305)
T ss_dssp TTCTTCCCBCCHHHHHHHHHHHHHH-CT-TSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC----C-SHHH--
T ss_pred cCCCCCCcccCHHHHHHHHHHHHHc-CC-CeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCC----C-CHHH--
Confidence 5667777889999999999999998 44 5666665543 35899999999999999999999654 3 4344
Q ss_pred HHHHHHHhhCCCCcEEE
Q psy9602 211 DYLRDVGEAAPATPLFY 227 (239)
Q Consensus 211 ~yf~~VaeatpdLPIiL 227 (239)
++.++++. +.|+++
T Consensus 203 --~~~i~~~~-~~P~~~ 216 (305)
T 3ih1_A 203 --FRLFNSKV-NAPLLA 216 (305)
T ss_dssp --HHHHHHHS-CSCBEE
T ss_pred --HHHHHHHc-CCCEEE
Confidence 56677777 689853
No 47
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=95.35 E-value=0.24 Score=47.09 Aligned_cols=95 Identities=17% Similarity=0.208 Sum_probs=70.2
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecCC-------------------------------CCHHHHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIGG-------------------------------TCFQEVVE 180 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg~-------------------------------~St~eAIe 180 (239)
+|+.+--...+.+|-.+=|+.++++.+ |...-||+=+-+ .+++++|+
T Consensus 192 CGH~~gk~lvp~~e~v~rI~AAr~A~~~~g~d~vIiARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~ 271 (429)
T 1f8m_A 192 CGHLGGKVLIPTQQHIRTLTSARLAADVADVPTVVIARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIA 271 (429)
T ss_dssp CTTSSCCEECCHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHH
T ss_pred ccCCCCCeeeCHHHHHHHHHHHHHHHHhcCCCEEEEEEechhhhccccccccccccccccCCCCcccccccccCHHHHHH
Confidence 466666677899999999999988763 214455553333 57899999
Q ss_pred HHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC-CCCc
Q psy9602 181 LAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI-PMFT 234 (239)
Q Consensus 181 lar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~-P~~T 234 (239)
.++.+.+ |||.+.+-++. + +.+++..+-+.|....| ..++.||. |.++
T Consensus 272 Ra~AYa~-gAD~if~e~~~---~-~~eei~~f~~~v~~~~P-~~~La~n~sPsf~ 320 (429)
T 1f8m_A 272 RAKAYAP-FADLIWMETGT---P-DLEAARQFSEAVKAEYP-DQMLAYNCSPSFN 320 (429)
T ss_dssp HHHHHGG-GCSEEEECCSS---C-CHHHHHHHHHHHHTTCT-TCEEEEECCTTSC
T ss_pred HHHHHHh-cCCEEEeCCCC---C-CHHHHHHHHHHhcccCC-CceeecCCCCCCC
Confidence 9999999 99999986432 4 78999999999976565 33677887 5544
No 48
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=95.25 E-value=0.13 Score=46.25 Aligned_cols=85 Identities=15% Similarity=0.159 Sum_probs=56.5
Q ss_pred Eecccc--CCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC----CCCHHHHHHHHHHHHhCCCCEEEECC-CCCCCCCC
Q psy9602 133 VNGTTG--EGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG----GTCFQEVVELAKHAESLNVHAVLCLP-ELFFTPAS 205 (239)
Q Consensus 133 V~GstG--E~~sLT~eER~~li~~vve~~~G~rvpVIaGVg----~~St~eAIelar~A~~aGAdaVlV~P-P~y~~~~s 205 (239)
++|+.| --...+.+|..+-|+.++++......-|++=+- ..+.+++|+.++.++++|||++++-- + + +
T Consensus 117 ~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~----~-~ 191 (290)
T 2hjp_A 117 DTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQ----K-T 191 (290)
T ss_dssp CC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCC----S-S
T ss_pred cccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCC----C-C
Confidence 456666 455677888888999998875321455555332 23489999999999999999999864 3 2 4
Q ss_pred HHHHHHHHHHHHhhCCC--CcEEE
Q psy9602 206 VEDLVDYLRDVGEAAPA--TPLFY 227 (239)
Q Consensus 206 ~e~iv~yf~~Vaeatpd--LPIiL 227 (239)
.+++ +.++++. + +|+++
T Consensus 192 ~~~~----~~i~~~~-~~~vP~i~ 210 (290)
T 2hjp_A 192 PDEI----LAFVKSW-PGKVPLVL 210 (290)
T ss_dssp SHHH----HHHHHHC-CCSSCEEE
T ss_pred HHHH----HHHHHHc-CCCCCEEE
Confidence 4655 5556666 4 89886
No 49
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=95.12 E-value=0.26 Score=42.31 Aligned_cols=92 Identities=17% Similarity=0.132 Sum_probs=62.2
Q ss_pred HHhhhcCCCCEE---E-eccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC--------CCCHHHHHHHHHHHHhC
Q psy9602 121 ITLRMAPIIDQM---V-NGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG--------GTCFQEVVELAKHAESL 188 (239)
Q Consensus 121 v~~~~~gg~glv---V-~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg--------~~St~eAIelar~A~~a 188 (239)
++..++.|...+ + .| .++.+|..+.++.+++.+...++|+++.+. ..+..+..+.++.|+++
T Consensus 105 v~~a~~~Ga~~v~~~l~~~------~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~ 178 (273)
T 2qjg_A 105 VEEAIRMGADAVSIHVNVG------SDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAEL 178 (273)
T ss_dssp HHHHHHTTCSEEEEEEEET------STTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEEEecC------CCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHc
Confidence 344456666544 2 34 347788888888887776533588888652 13455555566999999
Q ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 189 NVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 189 GAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
|+|.+.+.+| . + .++++.+.+.+ ++||+..
T Consensus 179 Gad~i~~~~~----~-~----~~~l~~i~~~~-~ipvva~ 208 (273)
T 2qjg_A 179 GADIVKTSYT----G-D----IDSFRDVVKGC-PAPVVVA 208 (273)
T ss_dssp TCSEEEECCC----S-S----HHHHHHHHHHC-SSCEEEE
T ss_pred CCCEEEECCC----C-C----HHHHHHHHHhC-CCCEEEE
Confidence 9999888753 2 3 45677888888 7999874
No 50
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=95.04 E-value=0.3 Score=43.49 Aligned_cols=100 Identities=10% Similarity=0.003 Sum_probs=78.1
Q ss_pred CCCC-EEEeccccCCc-----CCCHHHHHHHHHHHHHHhcCCCceEEEecC---CCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 127 PIID-QMVNGTTGEGV-----SMTTAERKLNLEAWMTEAKTHGFTVMVQIG---GTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 127 gg~g-lvV~GstGE~~-----sLT~eER~~li~~vve~~~G~rvpVIaGVg---~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
.+.. +-++.+++|.+ ..|.+|-.+.++.+++.++.....|.++.. ..+.+..+++++.+.++|++.+.+..
T Consensus 92 ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~D 171 (293)
T 3ewb_X 92 AVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIPD 171 (293)
T ss_dssp CSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEecC
Confidence 3443 55888999875 789999999999888877654456666543 36888899999999999999988877
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCC---CcEEEE
Q psy9602 198 ELFFTPASVEDLVDYLRDVGEAAPA---TPLFYY 228 (239)
Q Consensus 198 P~y~~~~s~e~iv~yf~~Vaeatpd---LPIiLY 228 (239)
-.... ++.++.+.++.+.+..|+ +||-++
T Consensus 172 T~G~~--~P~~v~~lv~~l~~~~~~~~~~~l~~H 203 (293)
T 3ewb_X 172 TVGYT--NPTEFGQLFQDLRREIKQFDDIIFASH 203 (293)
T ss_dssp SSSCC--CHHHHHHHHHHHHHHCTTGGGSEEEEE
T ss_pred CCCCC--CHHHHHHHHHHHHHhcCCccCceEEEE
Confidence 65442 789999999999999864 556554
No 51
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=94.97 E-value=0.24 Score=44.95 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=56.7
Q ss_pred ccccCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecC---CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 135 GTTGEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIG---GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 135 GstGE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg---~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
|+.+--...+.+|..+=|+.++++.+ +.++-|++=+- ..+.+++|+.++.+.++|||++.+.-+ . +.+++
T Consensus 124 gh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~----~-~~~ei 198 (302)
T 3fa4_A 124 GHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGI----T-SREMA 198 (302)
T ss_dssp ----CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTC----C-CHHHH
T ss_pred CCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCC----C-CHHHH
Confidence 33344567789999888888888753 21455665432 246899999999999999999988653 2 56666
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.. ++++.++.|+++
T Consensus 199 ~~----~~~~~~~~Pl~~ 212 (302)
T 3fa4_A 199 RQ----VIQDLAGWPLLL 212 (302)
T ss_dssp HH----HHHHTTTSCEEE
T ss_pred HH----HHHHhcCCceeE
Confidence 54 444443478755
No 52
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=94.88 E-value=0.35 Score=44.68 Aligned_cols=100 Identities=7% Similarity=-0.104 Sum_probs=80.0
Q ss_pred CCCC-EEEeccccCCc-----CCCHHHHHHHHHHHHHHhcCCCceEEEec---CCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 127 PIID-QMVNGTTGEGV-----SMTTAERKLNLEAWMTEAKTHGFTVMVQI---GGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 127 gg~g-lvV~GstGE~~-----sLT~eER~~li~~vve~~~G~rvpVIaGV---g~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
.+.. +-++.+++|.+ ..|.+|-.+.+..+++.+......|.++. +..+.+.+++.++.+.++||+.+.+..
T Consensus 99 ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~D 178 (370)
T 3rmj_A 99 APKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIPD 178 (370)
T ss_dssp SSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEecC
Confidence 4554 45888999864 68999999999888888776445666664 567889999999999999999988887
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCC---CcEEEE
Q psy9602 198 ELFFTPASVEDLVDYLRDVGEAAPA---TPLFYY 228 (239)
Q Consensus 198 P~y~~~~s~e~iv~yf~~Vaeatpd---LPIiLY 228 (239)
-..+. ++.++.+.++.+.+..|+ +||-++
T Consensus 179 T~G~~--~P~~~~~lv~~l~~~~~~~~~~~l~~H 210 (370)
T 3rmj_A 179 TVGYS--IPYKTEEFFRELIAKTPNGGKVVWSAH 210 (370)
T ss_dssp SSSCC--CHHHHHHHHHHHHHHSTTGGGSEEEEE
T ss_pred ccCCc--CHHHHHHHHHHHHHhCCCcCceEEEEE
Confidence 65443 789999999999999865 777665
No 53
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=94.47 E-value=0.46 Score=43.07 Aligned_cols=111 Identities=12% Similarity=0.120 Sum_probs=70.4
Q ss_pred HHHHhhHHhhhcCCCCEE-Eecccc--------C-------CcCCCHHHHH----HHHHHHHHHhcCCCceEEEecC---
Q psy9602 115 CMLLVGITLRMAPIIDQM-VNGTTG--------E-------GVSMTTAERK----LNLEAWMTEAKTHGFTVMVQIG--- 171 (239)
Q Consensus 115 ~~l~~~v~~~~~gg~glv-V~GstG--------E-------~~sLT~eER~----~li~~vve~~~G~rvpVIaGVg--- 171 (239)
..++.......+.|-+.+ +.+..| - -+-=|.+.|. ++++.+.+.++. +.||.+=++
T Consensus 152 ~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~-d~pV~vRls~~~ 230 (349)
T 3hgj_A 152 QAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPR-ELPLFVRVSATD 230 (349)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCT-TSCEEEEEESCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcC-CceEEEEecccc
Confidence 345444445555555444 666553 1 1122566664 566666666665 678888555
Q ss_pred ----CCCHHHHHHHHHHHHhCCCCEEEECCCCCCC----CCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 172 ----GTCFQEVVELAKHAESLNVHAVLCLPELFFT----PASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 172 ----~~St~eAIelar~A~~aGAdaVlV~PP~y~~----~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.+.++++++++..+++|+|.+-+....+.. +..+..-.++.+.|.+.+ ++||+.
T Consensus 231 ~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi~ 293 (349)
T 3hgj_A 231 WGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV-GLRTGA 293 (349)
T ss_dssp CSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH-CCEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc-CceEEE
Confidence 3578999999999999999999998432211 001122356778888888 799875
No 54
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.31 E-value=0.33 Score=44.59 Aligned_cols=108 Identities=14% Similarity=0.094 Sum_probs=76.5
Q ss_pred eEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHH
Q psy9602 102 WTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVEL 181 (239)
Q Consensus 102 W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIel 181 (239)
+-++..|+..-....|+.. ....+|.+++. ..++.++..+.++.+.+. + +.|+.++++... .+.
T Consensus 46 ~Pii~apM~~vt~~~lA~a--vA~~GGlgii~-------~~~s~e~~~~~I~~vk~~--~-~~pvga~ig~~~----~e~ 109 (361)
T 3khj_A 46 IPLISSAMDTVTEHLMAVG--MARLGGIGIIH-------KNMDMESQVNEVLKVKNS--G-GLRVGAAIGVNE----IER 109 (361)
T ss_dssp SSEEECSSTTTCSHHHHHH--HHHTTCEEEEC-------SSSCHHHHHHHHHHHHHT--T-CCCCEEEECTTC----HHH
T ss_pred CCEEeecCCCCCcHHHHHH--HHHcCCCeEEe-------cCCCHHHHHHHHHHHHhc--c-CceEEEEeCCCH----HHH
Confidence 3455556665544455432 23456655542 268999999999988765 3 678888887765 788
Q ss_pred HHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 182 AKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 182 ar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
++.+.++|+|.+.|-.++. +.+.+.+..+.+.+.. ++||++-|.
T Consensus 110 a~~l~eaGad~I~ld~a~G----~~~~~~~~i~~i~~~~-~~~Vivg~v 153 (361)
T 3khj_A 110 AKLLVEAGVDVIVLDSAHG----HSLNIIRTLKEIKSKM-NIDVIVGNV 153 (361)
T ss_dssp HHHHHHTTCSEEEECCSCC----SBHHHHHHHHHHHHHC-CCEEEEEEE
T ss_pred HHHHHHcCcCeEEEeCCCC----CcHHHHHHHHHHHHhc-CCcEEEccC
Confidence 8899999999998865542 3367778888888888 899998654
No 55
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=94.16 E-value=0.37 Score=43.80 Aligned_cols=85 Identities=14% Similarity=0.164 Sum_probs=55.1
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecCC---CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIGG---TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVED 208 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg~---~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~ 208 (239)
+|+.+.-...+.+|..+-|+.++++.+ +.+.-|++=+-+ .+.+++|+.++.+.++|||++++--+ + +.++
T Consensus 131 cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~----~-~~~~ 205 (307)
T 3lye_A 131 CGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGF----R-SKEQ 205 (307)
T ss_dssp -------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC----S-CHHH
T ss_pred cCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCC----C-CHHH
Confidence 455555567899998888888887753 214555553332 46789999999999999999988643 3 6677
Q ss_pred HHHHHHHHHhhCCCCcEEE
Q psy9602 209 LVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 209 iv~yf~~VaeatpdLPIiL 227 (239)
+..+-+.+. +.|+++
T Consensus 206 ~~~i~~~~~----~~Pv~~ 220 (307)
T 3lye_A 206 AAAAVAALA----PWPLLL 220 (307)
T ss_dssp HHHHHHHHT----TSCBEE
T ss_pred HHHHHHHcc----CCceeE
Confidence 776655553 367643
No 56
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=93.88 E-value=0.87 Score=39.91 Aligned_cols=68 Identities=15% Similarity=0.075 Sum_probs=55.5
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCC-EEEECC--CCC-----CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVH-AVLCLP--ELF-----FTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAd-aVlV~P--P~y-----~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
..|+++++.+.+.++..+.++.+++.|+| ++-+-- |.. +.. +.+.+.+.+++|.+++ ++||++==.|.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~-~~e~~~~iv~~vr~~~-~~Pv~vKi~~~ 168 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAY-DFEATEKLLKEVFTFF-TKPLGVKLPPY 168 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGG-CHHHHHHHHHHHTTTC-CSCEEEEECCC
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccC-CHHHHHHHHHHHHHhc-CCCEEEEECCC
Confidence 47999999999999999999999999999 887732 332 112 6788899999999988 89999865554
No 57
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.86 E-value=0.32 Score=42.38 Aligned_cols=64 Identities=14% Similarity=0.174 Sum_probs=50.1
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-----------------CHHHHHHHHHHHHhhCCCCcEEE--Ee
Q psy9602 169 QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-----------------SVEDLVDYLRDVGEAAPATPLFY--YH 229 (239)
Q Consensus 169 GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-----------------s~e~iv~yf~~VaeatpdLPIiL--YN 229 (239)
-.+..+.+++++.++..++.|+|++.+--|+.-+.. +.+.+++..+++.+.+|++|+++ |.
T Consensus 24 ~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~ 103 (262)
T 2ekc_A 24 MVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYY 103 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCH
T ss_pred cCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecC
Confidence 377889999999999999999999999988742110 22446677888888877899999 66
Q ss_pred CCC
Q psy9602 230 IPM 232 (239)
Q Consensus 230 ~P~ 232 (239)
+|.
T Consensus 104 n~v 106 (262)
T 2ekc_A 104 NPI 106 (262)
T ss_dssp HHH
T ss_pred cHH
Confidence 663
No 58
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.70 E-value=0.56 Score=42.13 Aligned_cols=77 Identities=10% Similarity=0.107 Sum_probs=58.0
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhh
Q psy9602 142 SMTTAERKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 142 sLT~eER~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaea 219 (239)
..+.+|..+-|+.++++..+...-|++=+ ...+.+++|+.++.++++|||++++--+ + +.+++ +.++++
T Consensus 132 l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i~~e~~----~-~~~~~----~~i~~~ 202 (287)
T 3b8i_A 132 LICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQRTLAYQEAGADGICLVGV----R-DFAHL----EAIAEH 202 (287)
T ss_dssp BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEEEEECC----C-SHHHH----HHHHTT
T ss_pred ccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEEEecCC----C-CHHHH----HHHHHh
Confidence 88999999999999998654245555532 2345689999999999999999998742 3 44444 566777
Q ss_pred CCCCcEEEE
Q psy9602 220 APATPLFYY 228 (239)
Q Consensus 220 tpdLPIiLY 228 (239)
. ++|+++-
T Consensus 203 ~-~~P~ii~ 210 (287)
T 3b8i_A 203 L-HIPLMLV 210 (287)
T ss_dssp C-CSCEEEE
T ss_pred C-CCCEEEe
Confidence 8 7999853
No 59
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.69 E-value=0.53 Score=42.96 Aligned_cols=85 Identities=13% Similarity=0.150 Sum_probs=60.1
Q ss_pred EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC---CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 133 VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG---TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 133 V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~---~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
++|+.|--...+.+|..+-|+.++++......-|++=+-+ .+++++|+.++.++++|||++++--+ + +.+++
T Consensus 143 ~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~----~-~~e~~ 217 (318)
T 1zlp_A 143 KCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAP----A-NVDEL 217 (318)
T ss_dssp CCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC----C-SHHHH
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC----C-CHHHH
Confidence 4566665567888999999999999874314455543322 22479999999999999999998643 3 44544
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
+.++++. ++|+++
T Consensus 218 ----~~i~~~l-~~P~la 230 (318)
T 1zlp_A 218 ----KEVSAKT-KGLRIA 230 (318)
T ss_dssp ----HHHHHHS-CSEEEE
T ss_pred ----HHHHHhc-CCCEEE
Confidence 5566777 689866
No 60
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=93.48 E-value=0.26 Score=43.38 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=55.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCC---EEEECC--CCC-----CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVH---AVLCLP--ELF-----FTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAd---aVlV~P--P~y-----~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
..|+++++.+.+.++..+.++.+++.|+| ++-+-. |.. +.. +.+.+.+..++|.+++ ++||++=-.|.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~-~~~~~~~ii~~vr~~~-~~Pv~vK~~~~ 170 (314)
T 2e6f_A 93 KKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAY-DFEAMRTYLQQVSLAY-GLPFGVKMPPY 170 (314)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGG-SHHHHHHHHHHHHHHH-CSCEEEEECCC
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcC-CHHHHHHHHHHHHHhc-CCCEEEEECCC
Confidence 57999999999999999999999999999 777743 332 111 6678889999999988 89999865554
No 61
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.43 E-value=0.45 Score=43.00 Aligned_cols=84 Identities=11% Similarity=0.140 Sum_probs=60.5
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC---CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG---GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLV 210 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg---~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv 210 (239)
+|+.+--...+.+|-.+-|+.++++..+.+.-|++=+- ..+++++|+.++.+.++|||++.+-.+ . +.+++.
T Consensus 126 cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~----~-~~ee~~ 200 (298)
T 3eoo_A 126 CGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM----K-TLDDYR 200 (298)
T ss_dssp TTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC----C-SHHHHH
T ss_pred cCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC----C-CHHHHH
Confidence 45555566789999999999999887542455555332 235789999999999999999998754 3 667776
Q ss_pred HHHHHHHhhCCCCcEEE
Q psy9602 211 DYLRDVGEAAPATPLFY 227 (239)
Q Consensus 211 ~yf~~VaeatpdLPIiL 227 (239)
.+-+. . +.|+++
T Consensus 201 ~~~~~----~-~~Pl~~ 212 (298)
T 3eoo_A 201 RFKEA----V-KVPILA 212 (298)
T ss_dssp HHHHH----H-CSCBEE
T ss_pred HHHHH----c-CCCeEE
Confidence 55444 4 467654
No 62
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=93.13 E-value=0.44 Score=43.89 Aligned_cols=80 Identities=9% Similarity=-0.005 Sum_probs=53.4
Q ss_pred CHHHHH----HHHHHHHHHhcCCCceEEEecCC----------CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 144 TTAERK----LNLEAWMTEAKTHGFTVMVQIGG----------TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 144 T~eER~----~li~~vve~~~G~rvpVIaGVg~----------~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
|.+.|. ++++.+.+.++. + ||.+=++. .+.++++++++.+++.|+|++-+..+.+... ....-
T Consensus 211 slenR~r~~~eiv~aVr~avg~-~-~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~-~~~~~ 287 (377)
T 2r14_A 211 SIENRARFPLEVVDAVAEVFGP-E-RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGG-DITYP 287 (377)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC-------CCC
T ss_pred chhhchHHHHHHHHHHHHHcCC-C-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCC-CCcch
Confidence 456664 455666666654 4 88775543 3468899999999999999999987643211 00012
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.++.+.|.+++ ++||+.
T Consensus 288 ~~~~~~ik~~~-~iPvi~ 304 (377)
T 2r14_A 288 EGFREQMRQRF-KGGLIY 304 (377)
T ss_dssp TTHHHHHHHHC-CSEEEE
T ss_pred HHHHHHHHHHC-CCCEEE
Confidence 45677888888 899886
No 63
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=92.84 E-value=0.88 Score=41.58 Aligned_cols=79 Identities=8% Similarity=-0.012 Sum_probs=52.5
Q ss_pred CHHHHHH----HHHHHHHHhcCCCceEEEecC-----------CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH
Q psy9602 144 TTAERKL----NLEAWMTEAKTHGFTVMVQIG-----------GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVED 208 (239)
Q Consensus 144 T~eER~~----li~~vve~~~G~rvpVIaGVg-----------~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~ 208 (239)
|.+.|.+ +++.+.+.++. + ||.+=++ ..+.++++++++.+++.|+|.+-+..+.+..... .
T Consensus 206 slenr~r~~~eiv~avr~~vg~-~-~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~ 281 (364)
T 1vyr_A 206 SVENRARLVLEVVDAVCNEWSA-D-RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKP--Y 281 (364)
T ss_dssp SHHHHTHHHHHHHHHHHHHSCG-G-GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC--C
T ss_pred chhcChhhHHHHHHHHHHhcCC-C-cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCc--c
Confidence 3566644 45556666654 4 7777222 2267789999999999999999998754321101 1
Q ss_pred HHHHHHHHHhhCCCCcEEE
Q psy9602 209 LVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 209 iv~yf~~VaeatpdLPIiL 227 (239)
-.++.+.|.+++ ++||+.
T Consensus 282 ~~~~~~~v~~~~-~iPvi~ 299 (364)
T 1vyr_A 282 SEAFRQKVRERF-HGVIIG 299 (364)
T ss_dssp CHHHHHHHHHHC-CSEEEE
T ss_pred cHHHHHHHHHHC-CCCEEE
Confidence 135677888888 899875
No 64
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=92.68 E-value=0.23 Score=45.03 Aligned_cols=99 Identities=8% Similarity=-0.147 Sum_probs=74.4
Q ss_pred CCC-EEEeccccCCc-----CCCHHHHHHHHHHHHHHhcCCCceEEEec---CCCCHHHHHHHHHHHHhCCCCEEEECCC
Q psy9602 128 IID-QMVNGTTGEGV-----SMTTAERKLNLEAWMTEAKTHGFTVMVQI---GGTCFQEVVELAKHAESLNVHAVLCLPE 198 (239)
Q Consensus 128 g~g-lvV~GstGE~~-----sLT~eER~~li~~vve~~~G~rvpVIaGV---g~~St~eAIelar~A~~aGAdaVlV~PP 198 (239)
+.. +-++.+++|.+ ..|.+|-.+.++.+++.++.....|.++. +..+.+..+++++.+.++||+.+.+..-
T Consensus 94 g~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT 173 (325)
T 3eeg_A 94 KRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIPDT 173 (325)
T ss_dssp SSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBS
T ss_pred CCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEecCc
Confidence 444 45888888875 56777777777777776655456776664 4678899999999999999998777765
Q ss_pred CCCCCCCHHHHHHHHHHHHhhCCC---CcEEEE
Q psy9602 199 LFFTPASVEDLVDYLRDVGEAAPA---TPLFYY 228 (239)
Q Consensus 199 ~y~~~~s~e~iv~yf~~Vaeatpd---LPIiLY 228 (239)
..+ . ++.++.+.++.+.+..|+ +||-++
T Consensus 174 ~G~-~-~P~~v~~lv~~l~~~~~~~~~~~i~~H 204 (325)
T 3eeg_A 174 TGY-M-LPWQYGERIKYLMDNVSNIDKAILSAH 204 (325)
T ss_dssp SSC-C-CHHHHHHHHHHHHHHCSCGGGSEEEEC
T ss_pred cCC-c-CHHHHHHHHHHHHHhCCCCCceEEEEE
Confidence 543 2 789999999999999865 777654
No 65
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=92.67 E-value=0.59 Score=41.03 Aligned_cols=81 Identities=11% Similarity=0.035 Sum_probs=58.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCC-CCHHHHHHHHHHHHhCC-CCEEEECCCCC---------C-----------
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGG-TCFQEVVELAKHAESLN-VHAVLCLPELF---------F----------- 201 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~-~St~eAIelar~A~~aG-AdaVlV~PP~y---------~----------- 201 (239)
+.+...++++.+.+.+ ++||++-++. .+.++..++++.++++| +|++.+..-.+ .
T Consensus 144 ~~~~~~~ii~~vr~~~---~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~g 220 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAY---GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFG 220 (314)
T ss_dssp SHHHHHHHHHHHHHHH---CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEE
T ss_pred CHHHHHHHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCC
Confidence 6777888999998887 4799987764 36778888899999999 99998765210 0
Q ss_pred --C-CCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 202 --T-PASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 202 --~-~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
. +.....-.++.+.+.+.+|++||+.
T Consensus 221 G~sg~~~~p~~~~~i~~v~~~~~~ipvi~ 249 (314)
T 2e6f_A 221 GLGGKYILPTALANVNAFYRRCPDKLVFG 249 (314)
T ss_dssp EEESGGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred ccCcccccHHHHHHHHHHHHhcCCCCEEE
Confidence 0 0011234688888888876799874
No 66
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=92.55 E-value=1.2 Score=36.85 Aligned_cols=92 Identities=15% Similarity=0.119 Sum_probs=56.7
Q ss_pred hhcCCCCEEEeccccCC-cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Q psy9602 124 RMAPIIDQMVNGTTGEG-VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT 202 (239)
Q Consensus 124 ~~~gg~glvV~GstGE~-~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~ 202 (239)
..+.|...+++++.-.. +..+. .++++.+.+... ..++++++. +.++ ++.+++.|+|.+++.++.+..
T Consensus 84 ~~~~Gad~v~l~~~~~~~p~~~~---~~~i~~~~~~~~--~~~v~~~~~--t~~e----~~~~~~~G~d~i~~~~~g~t~ 152 (223)
T 1y0e_A 84 LIESQCEVIALDATLQQRPKETL---DELVSYIRTHAP--NVEIMADIA--TVEE----AKNAARLGFDYIGTTLHGYTS 152 (223)
T ss_dssp HHHHTCSEEEEECSCSCCSSSCH---HHHHHHHHHHCT--TSEEEEECS--SHHH----HHHHHHTTCSEEECTTTTSST
T ss_pred HHhCCCCEEEEeeecccCcccCH---HHHHHHHHHhCC--CceEEecCC--CHHH----HHHHHHcCCCEEEeCCCcCcC
Confidence 34556666655543221 11233 467777777663 467776553 4444 556889999999988765532
Q ss_pred CC--C--HHHHHHHHHHHHhhCCCCcEEE
Q psy9602 203 PA--S--VEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 203 ~~--s--~e~iv~yf~~VaeatpdLPIiL 227 (239)
.. . ...-+++++.+.+.. ++||+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~-~ipvia 180 (223)
T 1y0e_A 153 YTQGQLLYQNDFQFLKDVLQSV-DAKVIA 180 (223)
T ss_dssp TSTTCCTTHHHHHHHHHHHHHC-CSEEEE
T ss_pred CCCCCCCCcccHHHHHHHHhhC-CCCEEE
Confidence 10 1 334467899999988 899875
No 67
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=92.41 E-value=0.7 Score=41.53 Aligned_cols=88 Identities=14% Similarity=0.217 Sum_probs=56.6
Q ss_pred Eecccc--CCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC----CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCH
Q psy9602 133 VNGTTG--EGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG----GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASV 206 (239)
Q Consensus 133 V~GstG--E~~sLT~eER~~li~~vve~~~G~rvpVIaGVg----~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~ 206 (239)
++|+.| .-...+.+|..+-|+.++++..+...-|++=+- ..+.+++|+.++.++++|||++++-++. + +.
T Consensus 121 ~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~---~-~~ 196 (295)
T 1s2w_A 121 TNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKK---A-DP 196 (295)
T ss_dssp ------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCS---S-SS
T ss_pred cccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCC---C-CH
Confidence 455656 245678888999999999886442455555332 2347999999999999999999997421 2 44
Q ss_pred HHHHHHHHHHHhhCCCCcEEE
Q psy9602 207 EDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 207 e~iv~yf~~VaeatpdLPIiL 227 (239)
+++..+-+.+.. .+|+++
T Consensus 197 ~~~~~i~~~~~~---~~P~i~ 214 (295)
T 1s2w_A 197 SDIEAFMKAWNN---QGPVVI 214 (295)
T ss_dssp HHHHHHHHHHTT---CSCEEE
T ss_pred HHHHHHHHHcCC---CCCEEE
Confidence 666666555531 378753
No 68
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=92.39 E-value=1.3 Score=41.86 Aligned_cols=106 Identities=11% Similarity=0.039 Sum_probs=70.7
Q ss_pred HHhhhcCCCC-EEEeccccCCc-----CCCHHHHHHHHHHHHHHhcCCCceEEEec---CCCCHHHHHHHHHHHHhCCCC
Q psy9602 121 ITLRMAPIID-QMVNGTTGEGV-----SMTTAERKLNLEAWMTEAKTHGFTVMVQI---GGTCFQEVVELAKHAESLNVH 191 (239)
Q Consensus 121 v~~~~~gg~g-lvV~GstGE~~-----sLT~eER~~li~~vve~~~G~rvpVIaGV---g~~St~eAIelar~A~~aGAd 191 (239)
++..++.+.. +-++.+++|.+ ..|.+|-.+.+..+++.++.....|.++. ...+.+..++.++.+.++||+
T Consensus 116 i~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~ 195 (423)
T 3ivs_A 116 ARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVN 195 (423)
T ss_dssp HHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCC
Confidence 3344555554 44777788864 45777777766666666655456666654 345678899999999999999
Q ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 192 AVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 192 aVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
.+.+..-..+. ++.++.+.++.|.+.. ++||-++-
T Consensus 196 ~i~l~DTvG~~--~P~~v~~lv~~l~~~~-~~~i~~H~ 230 (423)
T 3ivs_A 196 RVGIADTVGCA--TPRQVYDLIRTLRGVV-SCDIECHF 230 (423)
T ss_dssp EEEEEETTSCC--CHHHHHHHHHHHHHHC-SSEEEEEE
T ss_pred ccccCCccCcC--CHHHHHHHHHHHHhhc-CCeEEEEE
Confidence 88777655432 7899999999999987 78877653
No 69
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=92.30 E-value=0.4 Score=41.93 Aligned_cols=87 Identities=8% Similarity=-0.004 Sum_probs=62.3
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCC
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPE 198 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP 198 (239)
++...+.|.+++-.++++ + .+.++.+++.+ + .+||++ |+...+.+++++.++.+.++||+++.+..-
T Consensus 165 ~~~a~~~GAD~vkt~~~~-----~----~e~~~~~~~~~-~-~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvgra 233 (263)
T 1w8s_A 165 ARIALELGADAMKIKYTG-----D----PKTFSWAVKVA-G-KVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRN 233 (263)
T ss_dssp HHHHHHHTCSEEEEECCS-----S----HHHHHHHHHHT-T-TSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHH
T ss_pred HHHHHHcCCCEEEEcCCC-----C----HHHHHHHHHhC-C-CCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehh
Confidence 344456677877666542 2 24456666666 4 558776 555558999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHHhh
Q psy9602 199 LFFTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 199 ~y~~~~s~e~iv~yf~~Vaea 219 (239)
.+..+ ++....+-+..+...
T Consensus 234 I~~~~-dp~~~~~~l~~~v~~ 253 (263)
T 1w8s_A 234 VWQRR-DALKFARALAELVYG 253 (263)
T ss_dssp HHTST-THHHHHHHHHHHHC-
T ss_pred hcCCc-CHHHHHHHHHHHHhc
Confidence 77777 888887777776643
No 70
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=92.20 E-value=1.5 Score=41.76 Aligned_cols=96 Identities=11% Similarity=0.030 Sum_probs=66.5
Q ss_pred HhhhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEec-----CCCCHHHHHHHHHHHHhCCCCEEEE
Q psy9602 122 TLRMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQI-----GGTCFQEVVELAKHAESLNVHAVLC 195 (239)
Q Consensus 122 ~~~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGV-----g~~St~eAIelar~A~~aGAdaVlV 195 (239)
+...+.|...+ ++.++.+. +.-...++.+.+. ...|.+.+ ...+.+..+++++.+.++||+.+.+
T Consensus 107 ~~a~~~Gvd~i~if~~~sd~-----~ni~~~i~~ak~~----G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l 177 (464)
T 2nx9_A 107 ERAVKNGMDVFRVFDAMNDV-----RNMQQALQAVKKM----GAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIAL 177 (464)
T ss_dssp HHHHHTTCCEEEECCTTCCT-----HHHHHHHHHHHHT----TCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhCCcCEEEEEEecCHH-----HHHHHHHHHHHHC----CCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 34456666654 88888887 2223334443332 34453333 2337899999999999999999888
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 196 LPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 196 ~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
..-.... ++.++.+.++.|.+.. ++||-++-
T Consensus 178 ~DT~G~~--~P~~v~~lv~~l~~~~-~~~i~~H~ 208 (464)
T 2nx9_A 178 KDMAGIL--TPYAAEELVSTLKKQV-DVELHLHC 208 (464)
T ss_dssp EETTSCC--CHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred cCCCCCc--CHHHHHHHHHHHHHhc-CCeEEEEE
Confidence 7655432 6899999999999999 89988763
No 71
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=92.20 E-value=0.8 Score=40.75 Aligned_cols=94 Identities=12% Similarity=0.040 Sum_probs=61.9
Q ss_pred hhhcCCC-CEEEeccc--cCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecCC----------CCHHHHHHHHHHHHh
Q psy9602 123 LRMAPII-DQMVNGTT--GEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIGG----------TCFQEVVELAKHAES 187 (239)
Q Consensus 123 ~~~~gg~-glvV~Gst--GE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg~----------~St~eAIelar~A~~ 187 (239)
..++.|+ ++-+=+.. +.-...+.+|..+-|+.+++... |...-|++=+-+ .+.+++|+.++.+++
T Consensus 100 ~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~e 179 (275)
T 2ze3_A 100 HFAALGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYAD 179 (275)
T ss_dssp HHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHH
Confidence 3344444 45454443 34466799999999999999854 312333332222 157999999999999
Q ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 188 LNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 188 aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
+|||++++--+ + +.+++ +.++++. ++|+.
T Consensus 180 AGAd~i~~e~~----~-~~~~~----~~i~~~~-~~P~n 208 (275)
T 2ze3_A 180 AGADGIFVPLA----L-QSQDI----RALADAL-RVPLN 208 (275)
T ss_dssp TTCSEEECTTC----C-CHHHH----HHHHHHC-SSCEE
T ss_pred CCCCEEEECCC----C-CHHHH----HHHHHhc-CCCEE
Confidence 99999988643 3 55555 4566667 68874
No 72
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=92.12 E-value=1.5 Score=39.63 Aligned_cols=91 Identities=15% Similarity=0.012 Sum_probs=65.9
Q ss_pred CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEec---CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Q psy9602 127 PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQI---GGTCFQEVVELAKHAESLNVHAVLCLPELFFTP 203 (239)
Q Consensus 127 gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGV---g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~ 203 (239)
|+..+-+.-+..|. ++-.++++.+.+. .+.++..+ ...+.+..++.++.+.+.|++.|.+.--....
T Consensus 106 Gvd~v~I~~~~s~~-----~~~~~~i~~ak~~----G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~- 175 (345)
T 1nvm_A 106 GARVVRVATHCTEA-----DVSKQHIEYARNL----GMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMADSGGAM- 175 (345)
T ss_dssp TCCEEEEEEETTCG-----GGGHHHHHHHHHH----TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEECTTCCC-
T ss_pred CcCEEEEEEeccHH-----HHHHHHHHHHHHC----CCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCcc-
Confidence 34445465555553 4556666666554 34555554 45677899999999999999998887655433
Q ss_pred CCHHHHHHHHHHHHhhCC-CCcEEEE
Q psy9602 204 ASVEDLVDYLRDVGEAAP-ATPLFYY 228 (239)
Q Consensus 204 ~s~e~iv~yf~~Vaeatp-dLPIiLY 228 (239)
+++++.+.++.|.+.+| ++||.++
T Consensus 176 -~P~~v~~lv~~l~~~~~~~~pi~~H 200 (345)
T 1nvm_A 176 -SMNDIRDRMRAFKAVLKPETQVGMH 200 (345)
T ss_dssp -CHHHHHHHHHHHHHHSCTTSEEEEE
T ss_pred -CHHHHHHHHHHHHHhcCCCceEEEE
Confidence 68999999999999996 7898875
No 73
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=92.05 E-value=1.9 Score=38.62 Aligned_cols=80 Identities=11% Similarity=0.091 Sum_probs=54.2
Q ss_pred CHHHH----HHHHHHHHHHhcCCCceEEEecCC-------CCHHHHHHHHHHHHhCCCCEEEECCCCCCC---CCCHHHH
Q psy9602 144 TTAER----KLNLEAWMTEAKTHGFTVMVQIGG-------TCFQEVVELAKHAESLNVHAVLCLPELFFT---PASVEDL 209 (239)
Q Consensus 144 T~eER----~~li~~vve~~~G~rvpVIaGVg~-------~St~eAIelar~A~~aGAdaVlV~PP~y~~---~~s~e~i 209 (239)
|.+.| .++++.+.+.+ +.||.+=++. .+.++++++++.+++.|+|++-+....+.. +..+..-
T Consensus 189 slenr~r~~~eiv~avr~~v---~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~ 265 (338)
T 1z41_A 189 SPENRYRFLREIIDEVKQVW---DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQ 265 (338)
T ss_dssp SHHHHHHHHHHHHHHHHHHC---CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTT
T ss_pred chhhhHHHHHHHHHHHHHHc---CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccch
Confidence 45666 45555555555 3687775543 568899999999999999999998653321 1011123
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.++.+.|.+.+ ++||+.
T Consensus 266 ~~~~~~ir~~~-~iPVi~ 282 (338)
T 1z41_A 266 VSFAEKIREQA-DMATGA 282 (338)
T ss_dssp HHHHHHHHHHH-CCEEEE
T ss_pred HHHHHHHHHHC-CCCEEE
Confidence 56677788888 899885
No 74
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=91.84 E-value=1.1 Score=37.17 Aligned_cols=65 Identities=8% Similarity=0.132 Sum_probs=47.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++.....+.+...+..+...+.++|++++.|.....+ +.....++.+.+. ++|++++|.+.
T Consensus 45 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~---~~~~~~~~~~~~~--~iPvV~~~~~~ 109 (298)
T 3tb6_A 45 GYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQ---TPNIGYYLNLEKN--GIPFAMINASY 109 (298)
T ss_dssp TCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSC---CTTHHHHHHHHHT--TCCEEEESSCC
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEeccccccc---CCcHHHHHHHHhc--CCCEEEEecCc
Confidence 46777777778888889999999999999999997543211 1123455666554 79999998753
No 75
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=91.64 E-value=0.84 Score=42.13 Aligned_cols=113 Identities=13% Similarity=0.106 Sum_probs=74.3
Q ss_pred ceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHH
Q psy9602 101 KWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVE 180 (239)
Q Consensus 101 ~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIe 180 (239)
++-++.-|+..-....|+.. ....||.+++- -.+|.+|..+.++.+.+. + +++|-++++.. .+..+
T Consensus 46 ~~Pii~apM~~vs~~~lA~a--vA~aGGlg~i~-------~~~s~e~~~~~i~~vk~~--~-~l~vga~vg~~--~~~~~ 111 (366)
T 4fo4_A 46 NIPMVSASMDTVTEARLAIA--LAQEGGIGFIH-------KNMSIEQQAAQVHQVKIS--G-GLRVGAAVGAA--PGNEE 111 (366)
T ss_dssp SSSEEECCCTTTCSHHHHHH--HHHTTCEEEEC-------SSSCHHHHHHHHHHHHTT--T-SCCCEEECCSC--TTCHH
T ss_pred CCCEEeCCCCCCChHHHHHH--HHHcCCceEee-------cCCCHHHHHHHHHHHHhc--C-ceeEEEEeccC--hhHHH
Confidence 33455556555444455443 23455555442 148999999999888765 3 45555555432 34667
Q ss_pred HHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 181 LAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 181 lar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
.++.+.++|+|.+.+-..+. +.+.+.+..+.+.+..|++||+.-|..
T Consensus 112 ~~~~lieaGvd~I~idta~G----~~~~~~~~I~~ik~~~p~v~Vi~G~v~ 158 (366)
T 4fo4_A 112 RVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYPHLEIIGGNVA 158 (366)
T ss_dssp HHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCTTCEEEEEEEC
T ss_pred HHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHHhcCCCceEeeeeC
Confidence 78889999999998854432 235778888888888888999876543
No 76
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=91.56 E-value=0.69 Score=39.69 Aligned_cols=57 Identities=11% Similarity=0.151 Sum_probs=45.2
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC-----------------CCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 170 IGGTCFQEVVELAKHAESLNVHAVLCLPELFF-----------------TPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 170 Vg~~St~eAIelar~A~~aGAdaVlV~PP~y~-----------------~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.+..+.++.++.++.+++.|+|.+.+--|+.- ...+.+..++..+++.+.+ ++|+++
T Consensus 26 ~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~-~~Pv~~ 99 (262)
T 1rd5_A 26 AGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPEL-SCPVVL 99 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGC-SSCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEE
Confidence 45666799999999999999999999877641 1014566778888888887 899987
No 77
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=91.13 E-value=1 Score=40.56 Aligned_cols=85 Identities=11% Similarity=0.114 Sum_probs=59.9
Q ss_pred EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC---CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 133 VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG---GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 133 V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg---~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
++|+.|--...+.+|..+-|+.++++..+...-|++=+. ..+.+++|+.++.++++|||++++-.+ + +.+++
T Consensus 121 ~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~----~-~~~~~ 195 (295)
T 1xg4_A 121 RSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI----T-ELAMY 195 (295)
T ss_dssp CCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC----C-SHHHH
T ss_pred ccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC----C-CHHHH
Confidence 455666556789999999999999986442455555332 234589999999999999999998753 3 45555
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.. ++++. ++|++.
T Consensus 196 ~~----i~~~~-~iP~~~ 208 (295)
T 1xg4_A 196 RQ----FADAV-QVPILA 208 (295)
T ss_dssp HH----HHHHH-CSCBEE
T ss_pred HH----HHHHc-CCCEEE
Confidence 44 45555 578754
No 78
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=91.09 E-value=2.4 Score=41.05 Aligned_cols=82 Identities=20% Similarity=0.209 Sum_probs=56.0
Q ss_pred CHHHH----HHHHHHHHHHhcCCCceEEEec-------CCCCHHHHHHHHHHHHhCCCCEEEEC-----CCCC--CCCCC
Q psy9602 144 TTAER----KLNLEAWMTEAKTHGFTVMVQI-------GGTCFQEVVELAKHAESLNVHAVLCL-----PELF--FTPAS 205 (239)
Q Consensus 144 T~eER----~~li~~vve~~~G~rvpVIaGV-------g~~St~eAIelar~A~~aGAdaVlV~-----PP~y--~~~~s 205 (239)
|.+.| .++++.+.+.++. +.||.+=+ ++.+.++++++++.+++.|+|.+-+. ++.. .....
T Consensus 186 s~~~r~r~~~eiv~avr~~vG~-~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~ 264 (671)
T 1ps9_A 186 DYRNRMRFAVEVVRAVRERVGN-DFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVP 264 (671)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCS-SSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSC
T ss_pred cHHHHHHHHHHHHHHHHHHcCC-CceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCC
Confidence 45666 6667777777766 78887622 24678999999999999999999874 2110 00001
Q ss_pred HHHHHHHHHHHHhhCCCCcEEE
Q psy9602 206 VEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 206 ~e~iv~yf~~VaeatpdLPIiL 227 (239)
.....++.+.|.+.+ ++||+.
T Consensus 265 ~~~~~~~~~~i~~~~-~iPvi~ 285 (671)
T 1ps9_A 265 RGAFSWVTRKLKGHV-SLPLVT 285 (671)
T ss_dssp TTTTHHHHHHHTTSC-SSCEEE
T ss_pred cchHHHHHHHHHHhc-CceEEE
Confidence 122356778888888 899885
No 79
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=91.03 E-value=1.4 Score=38.79 Aligned_cols=99 Identities=13% Similarity=0.069 Sum_probs=64.6
Q ss_pred hhhcCCC-CEEEeccc--cCCcCCCHHHHHHHHHHHHHHhcCCCce--EEEecCC---------CCHHHHHHHHHHHHhC
Q psy9602 123 LRMAPII-DQMVNGTT--GEGVSMTTAERKLNLEAWMTEAKTHGFT--VMVQIGG---------TCFQEVVELAKHAESL 188 (239)
Q Consensus 123 ~~~~gg~-glvV~Gst--GE~~sLT~eER~~li~~vve~~~G~rvp--VIaGVg~---------~St~eAIelar~A~~a 188 (239)
..++.|+ ++-+=|.. ..-...+.+|..+-|+.+++......+| |++-+.. .+.+++|+.++..+++
T Consensus 101 ~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eA 180 (255)
T 2qiw_A 101 QILEAGAVGINVEDVVHSEGKRVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQA 180 (255)
T ss_dssp HHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHc
Confidence 3344444 44444432 1234568899999999999985411145 6664442 2489999999999999
Q ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 189 NVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 189 GAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
|||++++--+ + +.+++ +.|+++. ++|+.+--.|
T Consensus 181 GAd~i~~e~~----~-~~~~~----~~i~~~~-~~P~n~~~~~ 213 (255)
T 2qiw_A 181 GARSVYPVGL----S-TAEQV----ERLVDAV-SVPVNITAHP 213 (255)
T ss_dssp TCSEEEECCC----C-SHHHH----HHHHTTC-SSCBEEECBT
T ss_pred CCcEEEEcCC----C-CHHHH----HHHHHhC-CCCEEEEecC
Confidence 9999999532 3 44444 5667777 6887654334
No 80
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=90.91 E-value=2.1 Score=35.46 Aligned_cols=76 Identities=18% Similarity=0.178 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.....+..+.+.+.++|++++.|. +.+.....++.+.+. ++|++++
T Consensus 21 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~------~~~~~~~~~~~~~~~--~iPvV~~ 92 (291)
T 3l49_A 21 LKAYQAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLG------NLDVLNPWLQKINDA--GIPLFTV 92 (291)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESS------CHHHHHHHHHHHHHT--TCCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCC------ChhhhHHHHHHHHHC--CCcEEEe
Confidence 34445444444333567777777778888889999999999999999863 234455667777665 7999999
Q ss_pred eCCC
Q psy9602 229 HIPM 232 (239)
Q Consensus 229 N~P~ 232 (239)
|.+.
T Consensus 93 ~~~~ 96 (291)
T 3l49_A 93 DTAT 96 (291)
T ss_dssp SCCC
T ss_pred cCCC
Confidence 9864
No 81
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=90.74 E-value=0.68 Score=43.13 Aligned_cols=63 Identities=11% Similarity=0.125 Sum_probs=47.3
Q ss_pred CceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECC------CCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLP------ELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~P------P~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.++|+| ++.+|.+.++++++.++++|++++-... |+.|+..+.+++ ..+.++++.. ++|++-
T Consensus 142 ~~~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl-~~L~~~~~~~-Gl~~~t 211 (385)
T 3nvt_A 142 EPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGL-KILKRVSDEY-GLGVIS 211 (385)
T ss_dssp SCEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHH-HHHHHHHHHH-TCEEEE
T ss_pred CeEEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHH-HHHHHHHHHc-CCEEEE
Confidence 4567777 4667999999999999999999887664 443443255544 6777788888 899874
No 82
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=90.64 E-value=0.94 Score=39.67 Aligned_cols=81 Identities=7% Similarity=-0.087 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCC-CCHHHHHHHHHHHHhCCCCEEEECCCCC----C-----------------
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGG-TCFQEVVELAKHAESLNVHAVLCLPELF----F----------------- 201 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~-~St~eAIelar~A~~aGAdaVlV~PP~y----~----------------- 201 (239)
+.+...++++.+.+.+ ++||++=+.. .+.++..++++.++++|+|++.+..-.+ .
T Consensus 142 ~~e~~~~iv~~vr~~~---~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG 218 (311)
T 1jub_A 142 DFEATEKLLKEVFTFF---TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGG 218 (311)
T ss_dssp CHHHHHHHHHHHTTTC---CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEE
T ss_pred CHHHHHHHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCc
Confidence 6777778888877765 4799986554 3667888899999999999998865210 0
Q ss_pred --CCCCHHHHHHHHHHHHhhCC-CCcEEE
Q psy9602 202 --TPASVEDLVDYLRDVGEAAP-ATPLFY 227 (239)
Q Consensus 202 --~~~s~e~iv~yf~~Vaeatp-dLPIiL 227 (239)
.+.....-.++.+.+.++++ ++||+.
T Consensus 219 ~sg~~~~~~~~~~i~~v~~~~~~~ipvi~ 247 (311)
T 1jub_A 219 IGGAYIKPTALANVRAFYTRLKPEIQIIG 247 (311)
T ss_dssp EESGGGHHHHHHHHHHHHTTSCTTSEEEE
T ss_pred cccccccHHHHHHHHHHHHhcCCCCCEEE
Confidence 00012234678888888874 688874
No 83
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=90.63 E-value=1.4 Score=40.50 Aligned_cols=81 Identities=11% Similarity=0.011 Sum_probs=53.1
Q ss_pred CHHHH----HHHHHHHHHHhcCCCceEEEecCC----------CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 144 TTAER----KLNLEAWMTEAKTHGFTVMVQIGG----------TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 144 T~eER----~~li~~vve~~~G~rvpVIaGVg~----------~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
|.+.| .++++.+.+.++. + ||.+=++. .+.++++++++.+++.|+|.+-+..+.+....+...-
T Consensus 212 slenR~r~~~eiv~aVr~avg~-~-~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~ 289 (376)
T 1icp_A 212 SLENRCRFALEIVEAVANEIGS-D-RVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIEC 289 (376)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------C
T ss_pred cHHHhHHHHHHHHHHHHHHhcC-C-ceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCcccc
Confidence 35666 4556666666654 4 88875542 3466899999999999999999987654321010012
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
..+.+.|.+++ ++||+.
T Consensus 290 ~~~~~~vr~~~-~iPvi~ 306 (376)
T 1icp_A 290 TESLVPMRKAY-KGTFIV 306 (376)
T ss_dssp CCCSHHHHHHC-CSCEEE
T ss_pred HHHHHHHHHHc-CCCEEE
Confidence 24567788888 789875
No 84
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=90.41 E-value=2.3 Score=41.37 Aligned_cols=97 Identities=9% Similarity=0.022 Sum_probs=66.5
Q ss_pred HhhhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceE--EEec---CCCCHHHHHHHHHHHHhCCCCEEEE
Q psy9602 122 TLRMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTV--MVQI---GGTCFQEVVELAKHAESLNVHAVLC 195 (239)
Q Consensus 122 ~~~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpV--IaGV---g~~St~eAIelar~A~~aGAdaVlV 195 (239)
+...+.+...+ ++.++.+. +.-...++.+.+. ...| .++. ...+.+..+++++.+.++||+.+.+
T Consensus 124 e~a~~aGvd~vrIf~s~sd~-----~ni~~~i~~ak~~----G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L 194 (539)
T 1rqb_A 124 DKSAENGMDVFRVFDAMNDP-----RNMAHAMAAVKKA----GKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIAL 194 (539)
T ss_dssp HHHHHTTCCEEEECCTTCCT-----HHHHHHHHHHHHT----TCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHhCCCCEEEEEEehhHH-----HHHHHHHHHHHHC----CCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 34456666654 88888887 2333444444332 2344 2221 2347899999999999999998887
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCC-CCcEEEEe
Q psy9602 196 LPELFFTPASVEDLVDYLRDVGEAAP-ATPLFYYH 229 (239)
Q Consensus 196 ~PP~y~~~~s~e~iv~yf~~Vaeatp-dLPIiLYN 229 (239)
..-.... ++.++.+.++.|.+..| ++||-++-
T Consensus 195 ~DT~G~~--~P~~v~~lv~~l~~~~p~~i~I~~H~ 227 (539)
T 1rqb_A 195 KDMAALL--KPQPAYDIIKAIKDTYGQKTQINLHC 227 (539)
T ss_dssp EETTCCC--CHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCCCCc--CHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 7644432 68999999999999887 78887763
No 85
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=90.40 E-value=2.6 Score=38.04 Aligned_cols=80 Identities=15% Similarity=0.047 Sum_probs=54.3
Q ss_pred CHHHHH----HHHHHHHHHhcCCCceEEEecCC-------CCHHHHHHHHHHHHhCCCCEEEECCCCCCCC---CCHHHH
Q psy9602 144 TTAERK----LNLEAWMTEAKTHGFTVMVQIGG-------TCFQEVVELAKHAESLNVHAVLCLPELFFTP---ASVEDL 209 (239)
Q Consensus 144 T~eER~----~li~~vve~~~G~rvpVIaGVg~-------~St~eAIelar~A~~aGAdaVlV~PP~y~~~---~s~e~i 209 (239)
|.+.|. ++++.+.+.+ +.||.+=++. .+.++.+++++..+++|+|.+-|....+... ..+.--
T Consensus 189 slenR~r~~~eiv~avr~~v---~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~ 265 (340)
T 3gr7_A 189 SPENRYRFLGEVIDAVREVW---DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQ 265 (340)
T ss_dssp SHHHHHHHHHHHHHHHHHHC---CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTT
T ss_pred CHHHHHHHHHHHHHHHHHhc---CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCcccc
Confidence 567775 4555555555 3687775543 4688999999999999999999974322210 011223
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.++.+.|.+++ ++||+.
T Consensus 266 ~~~~~~ik~~~-~iPVi~ 282 (340)
T 3gr7_A 266 VPFAELIRREA-DIPTGA 282 (340)
T ss_dssp HHHHHHHHHHT-TCCEEE
T ss_pred HHHHHHHHHHc-CCcEEe
Confidence 56778888888 899886
No 86
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=90.32 E-value=0.37 Score=43.97 Aligned_cols=82 Identities=13% Similarity=0.095 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHH----HhcCCCceEEEecCC--------CCHHHHHHHHHHHHhCCCCEEEECCCCCCC----CCCHH
Q psy9602 144 TTAERKLNLEAWMT----EAKTHGFTVMVQIGG--------TCFQEVVELAKHAESLNVHAVLCLPELFFT----PASVE 207 (239)
Q Consensus 144 T~eER~~li~~vve----~~~G~rvpVIaGVg~--------~St~eAIelar~A~~aGAdaVlV~PP~y~~----~~s~e 207 (239)
|.+.|.+++..+++ .++. +.||.+=++. .+.++++++++..+++|+|.+-+....+.. +..+.
T Consensus 203 slenR~r~~~eiv~aVr~avg~-d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~ 281 (363)
T 3l5l_A 203 SFDNRSRFLLETLAAVREVWPE-NLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPA 281 (363)
T ss_dssp SHHHHHHHHHHHHHHHHTTSCT-TSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHcCC-CceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcc
Confidence 46777555544444 4443 5678774442 567899999999999999999987543211 10112
Q ss_pred HHHHHHHHHHhhCCCCcEEE
Q psy9602 208 DLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 208 ~iv~yf~~VaeatpdLPIiL 227 (239)
.-.++.+.|.+.+ ++||+.
T Consensus 282 ~~~~~~~~ir~~~-~iPVi~ 300 (363)
T 3l5l_A 282 FMGPIAERVRREA-KLPVTS 300 (363)
T ss_dssp TTHHHHHHHHHHH-TCCEEE
T ss_pred hhHHHHHHHHHHc-CCcEEE
Confidence 2355677777777 799885
No 87
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.28 E-value=1.1 Score=39.87 Aligned_cols=86 Identities=13% Similarity=0.191 Sum_probs=63.0
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC--------CHHHHHHHHHHHHhCCCCEEEECCC------CCCCCCCH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT--------CFQEVVELAKHAESLNVHAVLCLPE------LFFTPASV 206 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~--------St~eAIelar~A~~aGAdaVlV~PP------~y~~~~s~ 206 (239)
..|+.++|.++++.+.+. ...|+.-+|.. ++.+-|++++...++||+.||+-.= -.|.. ..
T Consensus 109 i~l~~~~~~~~I~~~~~~----G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAGA~~ViiEarEsG~~iGi~~~-~g 183 (251)
T 1qwg_A 109 SDISLEERNNAIKRAKDN----GFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAGADYVIIEGRESGKGKGLFDK-EG 183 (251)
T ss_dssp SCCCHHHHHHHHHHHHHT----TCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHTCSEEEECCTTTCCSSTTBCT-TS
T ss_pred ccCCHHHHHHHHHHHHHC----CCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCCCcEEEEeeecccCCcccCCC-CC
Confidence 459999999999999886 46777766664 4589999999999999999999983 22222 11
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 207 EDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 207 e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+--.+-...|.+.. ++.-++|..|.
T Consensus 184 ~~r~d~v~~i~~~l-~~eklifEAp~ 208 (251)
T 1qwg_A 184 KVKENELDVLAKNV-DINKVIFEAPQ 208 (251)
T ss_dssp CBCHHHHHHHHTTS-CGGGEEEECCS
T ss_pred CCcHHHHHHHHHhC-ChhhEEEECCC
Confidence 11223346677777 67778888885
No 88
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=90.17 E-value=0.5 Score=40.51 Aligned_cols=84 Identities=12% Similarity=0.023 Sum_probs=57.2
Q ss_pred hhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC
Q psy9602 123 LRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPELF 200 (239)
Q Consensus 123 ~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP~y 200 (239)
...+.|.+++..+. .+. .+.++.+++.+ ++||++ |++..+.+++++.++.+.++||+++++....+
T Consensus 174 ~a~~~Gad~i~~~~-----~~~----~~~l~~i~~~~---~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~ 241 (273)
T 2qjg_A 174 LGAELGADIVKTSY-----TGD----IDSFRDVVKGC---PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIF 241 (273)
T ss_dssp HHHHTTCSEEEECC-----CSS----HHHHHHHHHHC---SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHH
T ss_pred HHHHcCCCEEEECC-----CCC----HHHHHHHHHhC---CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhh
Confidence 33456666654442 233 34555555554 478887 55555689999999999999999999987766
Q ss_pred CCCCCHHHHHHHHHHHHhh
Q psy9602 201 FTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 201 ~~~~s~e~iv~yf~~Vaea 219 (239)
..+ ++.+..+.|..+...
T Consensus 242 ~~~-~~~~~~~~l~~~~~~ 259 (273)
T 2qjg_A 242 QHD-DVVGITRAVCKIVHE 259 (273)
T ss_dssp TSS-SHHHHHHHHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHHhc
Confidence 666 667666666665543
No 89
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=90.03 E-value=3.3 Score=36.02 Aligned_cols=93 Identities=13% Similarity=-0.019 Sum_probs=61.9
Q ss_pred HHhhhcCCCCEE--EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC--------CHHHHHHHHHHHHhCCC
Q psy9602 121 ITLRMAPIIDQM--VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT--------CFQEVVELAKHAESLNV 190 (239)
Q Consensus 121 v~~~~~gg~glv--V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~--------St~eAIelar~A~~aGA 190 (239)
++..++.|...+ +. ..| ..+.++..+.++.+++.+....+|+|+-.... +.++..+.++.|.++||
T Consensus 98 ve~Ai~~Ga~~v~~~~-nig---~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GA 173 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTI-YPG---SGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGA 173 (263)
T ss_dssp HHHHHHTTCSEEEEEE-CTT---STTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCCEEEEEE-ecC---CcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCC
Confidence 555677776543 33 222 34668888888888887754368988865331 55555556799999999
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC-cEEE
Q psy9602 191 HAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT-PLFY 227 (239)
Q Consensus 191 daVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL-PIiL 227 (239)
|.+=+..| . +. +.|+.+.+.+ +. ||+.
T Consensus 174 D~vkt~~~----~-~~----e~~~~~~~~~-~~~pV~a 201 (263)
T 1w8s_A 174 DAMKIKYT----G-DP----KTFSWAVKVA-GKVPVLM 201 (263)
T ss_dssp SEEEEECC----S-SH----HHHHHHHHHT-TTSCEEE
T ss_pred CEEEEcCC----C-CH----HHHHHHHHhC-CCCeEEE
Confidence 99888843 2 32 4467777777 55 8765
No 90
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=90.00 E-value=0.64 Score=42.55 Aligned_cols=79 Identities=14% Similarity=0.061 Sum_probs=53.3
Q ss_pred CHHHHH----HHHHHHHHHhcCCCceEEEecCC----------CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 144 TTAERK----LNLEAWMTEAKTHGFTVMVQIGG----------TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 144 T~eER~----~li~~vve~~~G~rvpVIaGVg~----------~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
|.+.|. ++++.+.+.++. + ||.+=++. .+.++++++++.+++.|+|++-+..+.+..... .-
T Consensus 206 slenr~r~~~eiv~avr~~vg~-~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~--~~ 281 (365)
T 2gou_A 206 SLENRLRFLDEVVAALVDAIGA-E-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPD--TP 281 (365)
T ss_dssp SHHHHTHHHHHHHHHHHHHHCG-G-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC--CC
T ss_pred chhhhHHHHHHHHHHHHHHcCC-C-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCC--cc
Confidence 355564 455666666654 4 88773333 366889999999999999999998864321101 11
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.++.+.|.+.+ ++|||.
T Consensus 282 ~~~~~~i~~~~-~iPvi~ 298 (365)
T 2gou_A 282 VSFKRALREAY-QGVLIY 298 (365)
T ss_dssp HHHHHHHHHHC-CSEEEE
T ss_pred HHHHHHHHHHC-CCcEEE
Confidence 25677888888 799875
No 91
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=89.97 E-value=2.6 Score=34.41 Aligned_cols=77 Identities=10% Similarity=0.111 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
=..++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|...... ..++.+.+ . ++|++
T Consensus 16 ~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~-------~~~~~~~~-~-~iPvV 86 (272)
T 3o74_A 16 SYARIAKQLEQGARARGYQLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPED-------DSYRELQD-K-GLPVI 86 (272)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSSC-------CHHHHHHH-T-TCCEE
T ss_pred hHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCccccH-------HHHHHHHH-c-CCCEE
Confidence 344455554444433356777766777888888999999999999999987542111 23344544 4 79999
Q ss_pred EEeCCC
Q psy9602 227 YYHIPM 232 (239)
Q Consensus 227 LYN~P~ 232 (239)
++|.+.
T Consensus 87 ~~~~~~ 92 (272)
T 3o74_A 87 AIDRRL 92 (272)
T ss_dssp EESSCC
T ss_pred EEccCC
Confidence 999764
No 92
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=89.85 E-value=3.3 Score=34.25 Aligned_cols=80 Identities=15% Similarity=0.085 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
.=..++++-+.+.+...+..+++.....+.....+..+...+.++|++++.|+.. +.+...++.+.+. ++|+
T Consensus 21 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~------~~~~~~~~~~~~~--~iPv 92 (293)
T 3l6u_A 21 EFAQRLINAFKAEAKANKYEALVATSQNSRISEREQILEFVHLKVDAIFITTLDD------VYIGSAIEEAKKA--GIPV 92 (293)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT------TTTHHHHHHHHHT--TCCE
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh------HHHHHHHHHHHHc--CCCE
Confidence 3344555555444443356777777778888889999999999999999987532 2233455666554 7999
Q ss_pred EEEeCCCC
Q psy9602 226 FYYHIPMF 233 (239)
Q Consensus 226 iLYN~P~~ 233 (239)
+++|.+..
T Consensus 93 V~~~~~~~ 100 (293)
T 3l6u_A 93 FAIDRMIR 100 (293)
T ss_dssp EEESSCCC
T ss_pred EEecCCCC
Confidence 99997643
No 93
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=89.79 E-value=2.5 Score=36.53 Aligned_cols=89 Identities=12% Similarity=0.093 Sum_probs=63.0
Q ss_pred cCCCHHHHHH-HHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHh-CCCCEEEEC--CCCC------CCCCCHHHHH
Q psy9602 141 VSMTTAERKL-NLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAES-LNVHAVLCL--PELF------FTPASVEDLV 210 (239)
Q Consensus 141 ~sLT~eER~~-li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~-aGAdaVlV~--PP~y------~~~~s~e~iv 210 (239)
...+.++..+ +++.+.+.. . ..|++++++..+.++..+.++.+++ .|+|++-+- .|.. +.. +.+.+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~-~-~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~-~~~~~~ 153 (311)
T 1ep3_A 77 QNPGLEVIMTEKLPWLNENF-P-ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGT-DPEVAA 153 (311)
T ss_dssp CBCCHHHHHHTHHHHHHHHC-T-TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGG-CHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhcC-C-CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcC-CHHHHH
Confidence 3455666533 344444322 2 4799999999999999999999998 999998663 2332 222 567788
Q ss_pred HHHHHHHhhCCCCcEEEEeCCCC
Q psy9602 211 DYLRDVGEAAPATPLFYYHIPMF 233 (239)
Q Consensus 211 ~yf~~VaeatpdLPIiLYN~P~~ 233 (239)
+..+++.+.+ +.||++--.|..
T Consensus 154 eii~~v~~~~-~~pv~vk~~~~~ 175 (311)
T 1ep3_A 154 ALVKACKAVS-KVPLYVKLSPNV 175 (311)
T ss_dssp HHHHHHHHHC-SSCEEEEECSCS
T ss_pred HHHHHHHHhc-CCCEEEEECCCh
Confidence 8999999988 899998655543
No 94
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=89.70 E-value=3.3 Score=37.06 Aligned_cols=111 Identities=15% Similarity=0.139 Sum_probs=67.3
Q ss_pred hHHhhhcCCCCEEEeccc-----cCC----cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCC----------------
Q psy9602 120 GITLRMAPIIDQMVNGTT-----GEG----VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTC---------------- 174 (239)
Q Consensus 120 ~v~~~~~gg~glvV~Gst-----GE~----~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~S---------------- 174 (239)
.+..+-.+|.|+++.+.+ |-. ..+..+|..+-++.+++.+.....++++++.+.+
T Consensus 44 ~y~~rA~gG~gliite~~~v~~~g~~~~~~~~i~~d~~~~~~~~~~~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~ 123 (338)
T 1z41_A 44 HYISRAIGQVGLIIVEASAVNPQGRITDQDLGIWSDEHIEGFAKLTEQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIA 123 (338)
T ss_dssp HHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSTHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCC
T ss_pred HHHHHHcCCCCEEEeCCeeccccccCCCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCC
Confidence 344555688898766543 211 2334555544444444433322458888776421
Q ss_pred -------------------HHHHHHHHHHHHhCCCCEEEECC-----------CCCCCCC-----C----HHHHHHHHHH
Q psy9602 175 -------------------FQEVVELAKHAESLNVHAVLCLP-----------ELFFTPA-----S----VEDLVDYLRD 215 (239)
Q Consensus 175 -------------------t~eAIelar~A~~aGAdaVlV~P-----------P~y~~~~-----s----~e~iv~yf~~ 215 (239)
.++-.+-|+.|+++|+|+|-+-. |...+-. + ..-+.+-+++
T Consensus 124 ~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~a 203 (338)
T 1z41_A 124 FDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDE 203 (338)
T ss_dssp SSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHH
Confidence 24566788899999999998865 3322110 1 2346778888
Q ss_pred HHhhCCCCcEEEEeCC
Q psy9602 216 VGEAAPATPLFYYHIP 231 (239)
Q Consensus 216 VaeatpdLPIiLYN~P 231 (239)
|.+++ +.||.+==.|
T Consensus 204 vr~~v-~~pv~vris~ 218 (338)
T 1z41_A 204 VKQVW-DGPLFVRVSA 218 (338)
T ss_dssp HHHHC-CSCEEEEEEC
T ss_pred HHHHc-CCcEEEEecC
Confidence 88888 8999886544
No 95
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=89.61 E-value=1.5 Score=39.77 Aligned_cols=80 Identities=11% Similarity=0.123 Sum_probs=52.6
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEE----ecCCC-CHHHHHHHHHHHHhCCCCEEEECCCCC---CCCCCH-----HHHH
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMV----QIGGT-CFQEVVELAKHAESLNVHAVLCLPELF---FTPASV-----EDLV 210 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIa----GVg~~-St~eAIelar~A~~aGAdaVlV~PP~y---~~~~s~-----e~iv 210 (239)
..+--.++++.+.+.+ .+||++ |.... +.++++++++.++++|+|++.|..-.. +.+ .. ..-.
T Consensus 110 ~~~~~~eiv~av~~~v---~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g-~~~~~~~~~~~ 185 (350)
T 3b0p_A 110 DLARVREILKAMGEAV---RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHARSALLALST-KANREIPPLRH 185 (350)
T ss_dssp CHHHHHHHHHHHHHHC---SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCH
T ss_pred CHHHHHHHHHHHHHHh---CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCc-ccccCCCcccH
Confidence 4455556777777665 378888 33322 346899999999999999999986431 111 00 0135
Q ss_pred HHHHHHHhhCCCCcEEE
Q psy9602 211 DYLRDVGEAAPATPLFY 227 (239)
Q Consensus 211 ~yf~~VaeatpdLPIiL 227 (239)
++...|.+.+|++||+.
T Consensus 186 ~~i~~ik~~~~~iPVia 202 (350)
T 3b0p_A 186 DWVHRLKGDFPQLTFVT 202 (350)
T ss_dssp HHHHHHHHHCTTSEEEE
T ss_pred HHHHHHHHhCCCCeEEE
Confidence 67778888876799874
No 96
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=89.44 E-value=2.5 Score=39.88 Aligned_cols=90 Identities=10% Similarity=0.018 Sum_probs=59.6
Q ss_pred hhhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECC-CC
Q psy9602 123 LRMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLP-EL 199 (239)
Q Consensus 123 ~~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~P-P~ 199 (239)
..++.+..++ +..+.|. .+.-.++++.+.+.+ + ++||++| + ...+.++.+.++|||++.+.. |-
T Consensus 262 ~~~~aG~d~v~i~~~~G~-----~~~~~~~i~~i~~~~-~-~~pvi~~~v------~t~~~a~~l~~aGad~I~vg~~~G 328 (514)
T 1jcn_A 262 LLTQAGVDVIVLDSSQGN-----SVYQIAMVHYIKQKY-P-HLQVIGGNV------VTAAQAKNLIDAGVDGLRVGMGCG 328 (514)
T ss_dssp HHHHTTCSEEEECCSCCC-----SHHHHHHHHHHHHHC-T-TCEEEEEEE------CSHHHHHHHHHHTCSEEEECSSCS
T ss_pred HHHHcCCCEEEeeccCCc-----chhHHHHHHHHHHhC-C-CCceEeccc------chHHHHHHHHHcCCCEEEECCCCC
Confidence 3455666655 4444442 134567888888877 3 5899984 5 224568889999999999943 21
Q ss_pred C---------CCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 200 F---------FTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 200 y---------~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
. +.. .+...+.....+++.. ++|||.
T Consensus 329 ~~~~t~~~~~~g~-~~~~~~~~~~~~~~~~-~ipVia 363 (514)
T 1jcn_A 329 SICITQEVMACGR-PQGTAVYKVAEYARRF-GVPIIA 363 (514)
T ss_dssp CCBTTBCCCSCCC-CHHHHHHHHHHHHGGG-TCCEEE
T ss_pred cccccccccCCCc-cchhHHHHHHHHHhhC-CCCEEE
Confidence 1 111 3566778888898888 899874
No 97
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=89.24 E-value=3.4 Score=36.05 Aligned_cols=64 Identities=16% Similarity=0.104 Sum_probs=44.3
Q ss_pred CceEEEecC----CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHH---hhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIG----GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVG---EAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg----~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Va---eatpdLPIiLYN~P 231 (239)
++.||+.-- ..+.++.+++.+.+++.|||-+=+.... . +.++....++... ... +.|+|.|+.=
T Consensus 139 ~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~gaDivKia~~a---~-s~~D~l~ll~~~~~~~~~~-~~P~I~~~MG 209 (257)
T 2yr1_A 139 SVWLVVSRHYFDGTPRKETLLADMRQAERYGADIAKVAVMP---K-SPEDVLVLLQATEEARREL-AIPLITMAMG 209 (257)
T ss_dssp TCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC---S-SHHHHHHHHHHHHHHHHHC-SSCEEEEECT
T ss_pred CCEEEEEecCCCCCcCHHHHHHHHHHHHhcCCCEEEEEecc---C-CHHHHHHHHHHHHHHhccC-CCCEEEEECC
Confidence 577887542 4567899999999999999988666432 2 5555555554433 333 7899999874
No 98
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=89.19 E-value=5.3 Score=34.57 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=60.4
Q ss_pred HHhhhcCCCCEEEeccccC-----CcCCCHHHHHHHHHHHHHHhcCCCceEEE---------------------------
Q psy9602 121 ITLRMAPIIDQMVNGTTGE-----GVSMTTAERKLNLEAWMTEAKTHGFTVMV--------------------------- 168 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE-----~~sLT~eER~~li~~vve~~~G~rvpVIa--------------------------- 168 (239)
++..+++|..++.+=--+. +..|+.+|+.++++.+.+.+..+++|+|+
T Consensus 49 ~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~a~~l~~l~~~~~~~liInd~~~lA~~~gAdGVHLg~~dl~~~~~ 128 (243)
T 3o63_A 49 AEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAACEILADAAHRYGALFAVNDRADIARAAGADVLHLGQRDLPVNVA 128 (243)
T ss_dssp HHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHHHHHHHHHHHHTTCEEEEESCHHHHHHHTCSEEEECTTSSCHHHH
T ss_pred HHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHHHHHHHHHHHhhCCEEEEeCHHHHHHHhCCCEEEecCCcCCHHHH
Confidence 3445677777765533321 23578888888888777766544566665
Q ss_pred ----------ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC--CCCC-HHHHHHHHHHHHhhC-CCCcEEE
Q psy9602 169 ----------QIGGTCFQEVVELAKHAESLNVHAVLCLPELFF--TPAS-VEDLVDYLRDVGEAA-PATPLFY 227 (239)
Q Consensus 169 ----------GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~--~~~s-~e~iv~yf~~Vaeat-pdLPIiL 227 (239)
|++..+. +.++.|.+.|+|.+.+.|-+.. ++ . ...-.+.++.+.+.. .++||+.
T Consensus 129 r~~~~~~~~iG~S~ht~----~Ea~~A~~~GaDyI~vgpvf~T~tK~-~~~~~gl~~l~~~~~~~~~~iPvvA 196 (243)
T 3o63_A 129 RQILAPDTLIGRSTHDP----DQVAAAAAGDADYFCVGPCWPTPTKP-GRAAPGLGLVRVAAELGGDDKPWFA 196 (243)
T ss_dssp HHHSCTTCEEEEEECSH----HHHHHHHHSSCSEEEECCSSCCCC------CCCHHHHHHHHTC---CCCEEE
T ss_pred HHhhCCCCEEEEeCCCH----HHHHHHhhCCCCEEEEcCccCCCCCC-CcchhhHHHHHHHHHhccCCCCEEE
Confidence 2222222 3466788899999999874322 11 1 011256788887762 1788875
No 99
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=89.16 E-value=3.8 Score=41.10 Aligned_cols=54 Identities=13% Similarity=0.064 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 174 CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 174 St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
+.+..+++++.+.++||+.+.+..-..+. ++.++.+.++.|.+..|++||-++-
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~--~P~~v~~lV~~lk~~~p~~~I~~H~ 312 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHILCIKDMAGLL--KPTACTMLVSSLRDRFPDLPLHIHT 312 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTSCC--CHHHHHHHHHHHHHHSTTCCEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcCCCc--CHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 77999999999999999998888755433 6899999999999999888887753
No 100
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=89.16 E-value=2.2 Score=38.96 Aligned_cols=86 Identities=12% Similarity=-0.026 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCC-EEEECC--CCC-----CCCCCHHHHHHHHH
Q psy9602 143 MTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVH-AVLCLP--ELF-----FTPASVEDLVDYLR 214 (239)
Q Consensus 143 LT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAd-aVlV~P--P~y-----~~~~s~e~iv~yf~ 214 (239)
...++..+-++..... .- +.||++++++.+.++-++.++.+++.|++ ++-|-- |.. +.. +.+.+.+..+
T Consensus 110 ~G~~~~~~~l~~~~~~-~~-~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~-~~e~l~~il~ 186 (345)
T 3oix_A 110 LGINYYLDYVTELQKQ-PD-SKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAY-DFETTDQILS 186 (345)
T ss_dssp SCHHHHHHHHHHHHHS-TT-CCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGG-CHHHHHHHHH
T ss_pred hhHHHHHHHHHHHhhc-cC-CCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcC-CHHHHHHHHH
Confidence 3456666655543322 12 57999999999999999999999999987 665531 321 111 6788999999
Q ss_pred HHHhhCCCCcEEEEeCCC
Q psy9602 215 DVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 215 ~VaeatpdLPIiLYN~P~ 232 (239)
+|.+++ ++||.+==-|.
T Consensus 187 av~~~~-~~PV~vKi~p~ 203 (345)
T 3oix_A 187 EVFTYF-TKPLGIKLPPY 203 (345)
T ss_dssp HHTTTC-CSCEEEEECCC
T ss_pred HHHHHh-CCCeEEEECCC
Confidence 999998 89999866664
No 101
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.16 E-value=0.97 Score=39.36 Aligned_cols=80 Identities=8% Similarity=0.017 Sum_probs=55.2
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF 200 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y 200 (239)
++..++.|..+++.+. ++ .++++.+.+. ++|+|.|+. +...+..|.++|+|.+-+.|-..
T Consensus 99 a~~Ai~AGA~fIvsP~------~~----~~vi~~~~~~----gi~~ipGv~------TptEi~~A~~~Gad~vK~FPa~~ 158 (232)
T 4e38_A 99 ALAAKEAGATFVVSPG------FN----PNTVRACQEI----GIDIVPGVN------NPSTVEAALEMGLTTLKFFPAEA 158 (232)
T ss_dssp HHHHHHHTCSEEECSS------CC----HHHHHHHHHH----TCEEECEEC------SHHHHHHHHHTTCCEEEECSTTT
T ss_pred HHHHHHcCCCEEEeCC------CC----HHHHHHHHHc----CCCEEcCCC------CHHHHHHHHHcCCCEEEECcCcc
Confidence 3455677787776543 22 3566665553 589999987 24556778999999999976221
Q ss_pred CCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 201 FTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 201 ~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
. . =.+|++++..-.|++|+|
T Consensus 159 ~-g-----G~~~lkal~~p~p~ip~~ 178 (232)
T 4e38_A 159 S-G-----GISMVKSLVGPYGDIRLM 178 (232)
T ss_dssp T-T-----HHHHHHHHHTTCTTCEEE
T ss_pred c-c-----CHHHHHHHHHHhcCCCee
Confidence 1 1 148999999888788887
No 102
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=89.05 E-value=1.9 Score=39.50 Aligned_cols=58 Identities=9% Similarity=0.082 Sum_probs=42.3
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 165 TVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 165 pVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
++.++++.. .+..+.++.+.+.|+|++.+-.++. +++.+.+..+.+.+.+|++||++-
T Consensus 143 ~~~~~i~~~--~~~~~~a~~~~~~G~d~i~i~~~~g----~~~~~~e~i~~ir~~~~~~pviv~ 200 (404)
T 1eep_A 143 RVGAAVSID--IDTIERVEELVKAHVDILVIDSAHG----HSTRIIELIKKIKTKYPNLDLIAG 200 (404)
T ss_dssp CCEEEECSC--TTHHHHHHHHHHTTCSEEEECCSCC----SSHHHHHHHHHHHHHCTTCEEEEE
T ss_pred eEEEEeCCC--hhHHHHHHHHHHCCCCEEEEeCCCC----ChHHHHHHHHHHHHHCCCCeEEEc
Confidence 456666642 3457778888899999999854432 336778888888888878999973
No 103
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=89.00 E-value=1.6 Score=36.98 Aligned_cols=76 Identities=12% Similarity=0.119 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++..+..+.....+.++.+.+.++|++++.|... +.....++.+.+. ++|++++
T Consensus 19 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~------~~~~~~~~~~~~~--giPvV~~ 90 (330)
T 3uug_A 19 IDDGNNIVKQLQEAGYKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG------TTLSDVLKQAGEQ--GIKVIAY 90 (330)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG------GGGHHHHHHHHHT--TCEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc------hhHHHHHHHHHHC--CCCEEEE
Confidence 3344444333333246777767888888899999999999999999987531 2344455666554 7999999
Q ss_pred eCCC
Q psy9602 229 HIPM 232 (239)
Q Consensus 229 N~P~ 232 (239)
|.+.
T Consensus 91 ~~~~ 94 (330)
T 3uug_A 91 DRLI 94 (330)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 9864
No 104
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=88.88 E-value=4.1 Score=33.97 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=46.3
Q ss_pred CceEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMV-QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIa-GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++ ..+..+.+...+..+.+.+.++|++++.|... +.....++.+.+. ++|++++|.+.
T Consensus 34 g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~------~~~~~~~~~~~~~--~iPvV~~~~~~ 96 (305)
T 3g1w_A 34 NVTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDP------VELTDTINKAVDA--GIPIVLFDSGA 96 (305)
T ss_dssp TCEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSST------TTTHHHHHHHHHT--TCCEEEESSCC
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCH------HHHHHHHHHHHHC--CCcEEEECCCC
Confidence 456666 67788899999999999999999999987532 1233455566554 79999999864
No 105
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=88.79 E-value=7 Score=36.77 Aligned_cols=84 Identities=10% Similarity=0.037 Sum_probs=57.4
Q ss_pred CCHHHHHHHHHHHHHHhc------------------CCCce-EEEecCCC-CHHHHHHHHHHHHhCCCCEEEECCCCCCC
Q psy9602 143 MTTAERKLNLEAWMTEAK------------------THGFT-VMVQIGGT-CFQEVVELAKHAESLNVHAVLCLPELFFT 202 (239)
Q Consensus 143 LT~eER~~li~~vve~~~------------------G~rvp-VIaGVg~~-St~eAIelar~A~~aGAdaVlV~PP~y~~ 202 (239)
-..+.-.+|++.+.+..+ . ++| |++=+..+ +.++..+.++.++++|+|+|.+..-..-.
T Consensus 231 q~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~-~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r 309 (415)
T 3i65_A 231 QEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTK-KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQI 309 (415)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSS-SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCC
T ss_pred cCHHHHHHHHHHHHHHHHhhcccccccccccccccCC-CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCccc
Confidence 445666778888887642 2 578 88876654 44578999999999999999999754311
Q ss_pred C-----------C----CHHHHHHHHHHHHhhCC-CCcEEE
Q psy9602 203 P-----------A----SVEDLVDYLRDVGEAAP-ATPLFY 227 (239)
Q Consensus 203 ~-----------~----s~e~iv~yf~~Vaeatp-dLPIiL 227 (239)
. . -..--.+....|.++++ ++|||.
T Consensus 310 ~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg 350 (415)
T 3i65_A 310 NDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIA 350 (415)
T ss_dssp CCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEE
T ss_pred ccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEE
Confidence 1 0 12334577778888774 588873
No 106
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=88.76 E-value=3.2 Score=38.20 Aligned_cols=91 Identities=10% Similarity=-0.035 Sum_probs=53.6
Q ss_pred hhhcCCCCEEEe-ccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC-CCC
Q psy9602 123 LRMAPIIDQMVN-GTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP-ELF 200 (239)
Q Consensus 123 ~~~~gg~glvV~-GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P-P~y 200 (239)
..++.+..++++ .+.| ..++..+.++.+.+... ++|||+|... +.+.++.++++|||+|.+-. |-.
T Consensus 115 ~lieaGvd~I~idta~G-----~~~~~~~~I~~ik~~~p--~v~Vi~G~v~-----t~e~A~~a~~aGAD~I~vG~gpGs 182 (366)
T 4fo4_A 115 ALVEAGVDVLLIDSSHG-----HSEGVLQRIRETRAAYP--HLEIIGGNVA-----TAEGARALIEAGVSAVKVGIGPGS 182 (366)
T ss_dssp HHHHTTCSEEEEECSCT-----TSHHHHHHHHHHHHHCT--TCEEEEEEEC-----SHHHHHHHHHHTCSEEEECSSCST
T ss_pred HHHhCCCCEEEEeCCCC-----CCHHHHHHHHHHHHhcC--CCceEeeeeC-----CHHHHHHHHHcCCCEEEEecCCCC
Confidence 345666666544 3333 23567777888887763 5899887332 24567778889999999931 111
Q ss_pred ---------CCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 201 ---------FTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 201 ---------~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.. .+-..+.-..+.++.. ++|||.
T Consensus 183 ~~~tr~~~g~g~-p~~~~l~~v~~~~~~~-~iPVIA 216 (366)
T 4fo4_A 183 ICTTRIVTGVGV-PQITAIADAAGVANEY-GIPVIA 216 (366)
T ss_dssp TBCHHHHHCCCC-CHHHHHHHHHHHHGGG-TCCEEE
T ss_pred CCCcccccCccc-chHHHHHHHHHHHhhc-CCeEEE
Confidence 111 2333333344445566 799874
No 107
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=88.48 E-value=1.6 Score=37.41 Aligned_cols=76 Identities=16% Similarity=0.036 Sum_probs=49.1
Q ss_pred hhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Q psy9602 123 LRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT 202 (239)
Q Consensus 123 ~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~ 202 (239)
..++.|.++++.|.+ + ..+++..... .+++|.|+. +.. .+..|.+.|+|.+.+.|
T Consensus 93 ~A~~aGAd~v~~p~~------d----~~v~~~~~~~----g~~~i~G~~--t~~----e~~~A~~~Gad~vk~FP----- 147 (225)
T 1mxs_A 93 AVEAAGAQFVVTPGI------T----EDILEAGVDS----EIPLLPGIS--TPS----EIMMGYALGYRRFKLFP----- 147 (225)
T ss_dssp HHHHHTCSSEECSSC------C----HHHHHHHHHC----SSCEECEEC--SHH----HHHHHHTTTCCEEEETT-----
T ss_pred HHHHCCCCEEEeCCC------C----HHHHHHHHHh----CCCEEEeeC--CHH----HHHHHHHCCCCEEEEcc-----
Confidence 345556655554432 1 2444444441 578888853 333 45778899999999944
Q ss_pred CCCHHHH--HHHHHHHHhhCCCCcEE
Q psy9602 203 PASVEDL--VDYLRDVGEAAPATPLF 226 (239)
Q Consensus 203 ~~s~e~i--v~yf~~VaeatpdLPIi 226 (239)
. +.+ .+|++.+....|++|++
T Consensus 148 a---~~~~G~~~lk~i~~~~~~ipvv 170 (225)
T 1mxs_A 148 A---EISGGVAAIKAFGGPFGDIRFC 170 (225)
T ss_dssp H---HHHTHHHHHHHHHTTTTTCEEE
T ss_pred C---ccccCHHHHHHHHhhCCCCeEE
Confidence 2 333 78999999988888886
No 108
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=88.44 E-value=4.9 Score=35.56 Aligned_cols=82 Identities=13% Similarity=0.098 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHh-------cCCCceEEEecCC-CCHHHHHHHHHHHHhCCCCEEEECCCCC-----------CCC--
Q psy9602 145 TAERKLNLEAWMTEA-------KTHGFTVMVQIGG-TCFQEVVELAKHAESLNVHAVLCLPELF-----------FTP-- 203 (239)
Q Consensus 145 ~eER~~li~~vve~~-------~G~rvpVIaGVg~-~St~eAIelar~A~~aGAdaVlV~PP~y-----------~~~-- 203 (239)
.+.-.++++.+.+.+ +. ++||++=++. .+.++..++++.++++|+|++.+..-.+ ...
T Consensus 187 ~~~~~~il~~vr~~~~~~~~~~g~-~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg 265 (336)
T 1f76_A 187 GEALDDLLTAIKNKQNDLQAMHHK-YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGG 265 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTS-CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSE
T ss_pred HHHHHHHHHHHHHHHHhhhhcccc-cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCC
Confidence 344457788777776 23 5899997764 4556889999999999999999974211 000
Q ss_pred CC----HHHHHHHHHHHHhhCC-CCcEEE
Q psy9602 204 AS----VEDLVDYLRDVGEAAP-ATPLFY 227 (239)
Q Consensus 204 ~s----~e~iv~yf~~Vaeatp-dLPIiL 227 (239)
.+ .....++.+.+.++++ ++||+.
T Consensus 266 ~~g~~~~~~~~~~i~~i~~~~~~~ipVi~ 294 (336)
T 1f76_A 266 LSGRPLQLKSTEIIRRLSLELNGRLPIIG 294 (336)
T ss_dssp EEEGGGHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred cCCchhHHHHHHHHHHHHHHhCCCCCEEE
Confidence 01 1233466677777664 688874
No 109
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=88.39 E-value=1.1 Score=39.29 Aligned_cols=62 Identities=10% Similarity=0.142 Sum_probs=44.9
Q ss_pred ceEEEecC-CCCHHHHHHHHHHHHhCCCCEEEECCC------CCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 164 FTVMVQIG-GTCFQEVVELAKHAESLNVHAVLCLPE------LFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 164 vpVIaGVg-~~St~eAIelar~A~~aGAdaVlV~PP------~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.-||+|.. ..|.+.++++++.++++|+++|..... |.|+... ++=+..++++++.. ++|++-
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~-~egl~~l~~~~~~~-Gl~~~t 92 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYG-EKALRWMREAADEY-GLVTVT 92 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCT-HHHHHHHHHHHHHH-TCEEEE
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCcc-HHHHHHHHHHHHHc-CCcEEE
Confidence 45777875 458999999999999999999998742 1222212 44556677777888 899873
No 110
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=88.27 E-value=2.1 Score=37.45 Aligned_cols=71 Identities=13% Similarity=0.209 Sum_probs=56.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMF 233 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~ 233 (239)
+-.|++-+.+.+.++.++.++.+.+.|||.|=+=-=++-...+.+.+.+-...+.+..+++||++=.-+..
T Consensus 19 ~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~ 89 (258)
T 4h3d_A 19 RPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVV 89 (258)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechh
Confidence 44577899999999999999999999999998876554332267888888888888776899987655543
No 111
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=88.23 E-value=3 Score=37.10 Aligned_cols=74 Identities=18% Similarity=0.102 Sum_probs=59.8
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC---CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT---CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVG 217 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~---St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Va 217 (239)
..+|.+|-....+.++..++ +.+|++-.... |.+++++.+....++||++|-+- +.+++.+-.+.+.
T Consensus 58 ~~vtldemi~h~~aV~r~~~--~~~vvaD~pfgsy~~~~~a~~~a~rl~kaGa~aVklE--------gg~e~~~~I~al~ 127 (264)
T 1m3u_A 58 LPVTVADIAYHTAAVRRGAP--NCLLLADLPFMAYATPEQAFENAATVMRAGANMVKIE--------GGEWLVETVQMLT 127 (264)
T ss_dssp TTCCHHHHHHHHHHHHHHCT--TSEEEEECCTTSSSSHHHHHHHHHHHHHTTCSEEECC--------CSGGGHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCC--CCcEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEC--------CcHHHHHHHHHHH
Confidence 46899999999999998774 46777744332 89999999999999999999887 3356888888888
Q ss_pred hhCCCCcEE
Q psy9602 218 EAAPATPLF 226 (239)
Q Consensus 218 eatpdLPIi 226 (239)
++ ++|++
T Consensus 128 ~a--gipV~ 134 (264)
T 1m3u_A 128 ER--AVPVC 134 (264)
T ss_dssp HT--TCCEE
T ss_pred HC--CCCeE
Confidence 86 69988
No 112
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=88.22 E-value=1.9 Score=37.60 Aligned_cols=60 Identities=12% Similarity=-0.002 Sum_probs=43.8
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC-CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 169 QIGGTCFQEVVELAKHAESLNVHAVLCLPELF-FTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 169 GVg~~St~eAIelar~A~~aGAdaVlV~PP~y-~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
++--...+++++.++.+.+.|+.+|.+.+.+. +.. +++.+...|+.+.+. ++||+++-..
T Consensus 120 ~l~~~~~~~a~~el~~~~~~g~~Gv~l~~~~~~~~l-~d~~~~p~~~~~~e~--~lpv~iH~~~ 180 (334)
T 2hbv_A 120 QVPLQDLDLACKEASRAVAAGHLGIQIGNHLGDKDL-DDATLEAFLTHCANE--DIPILVHPWD 180 (334)
T ss_dssp CCCTTSHHHHHHHHHHHHHHTCCCEEEESCBTTBCT-TSHHHHHHHHHHHHT--TCCEEEECCS
T ss_pred ecCccCHHHHHHHHHHHHHcCCeEEEECCCCCCCCC-CcHHHHHHHHHHHHC--CCEEEECCCC
Confidence 44444556788888888889999997766432 223 678888888887764 8999998653
No 113
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=88.21 E-value=1.5 Score=37.16 Aligned_cols=79 Identities=10% Similarity=0.021 Sum_probs=49.6
Q ss_pred HhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Q psy9602 122 TLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF 201 (239)
Q Consensus 122 ~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~ 201 (239)
+..++.|.++++.|.+ + .++++..... +++++.|+. +..+ +..|.+.|+|.+.+.|..
T Consensus 82 ~~A~~aGAd~v~~p~~------d----~~v~~~~~~~----g~~~i~G~~--t~~e----~~~A~~~Gad~v~~Fpa~-- 139 (214)
T 1wbh_A 82 AEVTEAGAQFAISPGL------T----EPLLKAATEG----TIPLIPGIS--TVSE----LMLGMDYGLKEFKFFPAE-- 139 (214)
T ss_dssp HHHHHHTCSCEEESSC------C----HHHHHHHHHS----SSCEEEEES--SHHH----HHHHHHTTCCEEEETTTT--
T ss_pred HHHHHcCCCEEEcCCC------C----HHHHHHHHHh----CCCEEEecC--CHHH----HHHHHHCCCCEEEEecCc--
Confidence 3445556665555432 1 2444544442 578898853 3443 567889999999995511
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 202 TPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 202 ~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
. -.=.+|++.+....|++|++
T Consensus 140 -~---~gG~~~lk~i~~~~~~ipvv 160 (214)
T 1wbh_A 140 -A---NGGVKALQAIAGPFSQVRFC 160 (214)
T ss_dssp -T---TTHHHHHHHHHTTCTTCEEE
T ss_pred -c---ccCHHHHHHHhhhCCCCeEE
Confidence 1 11168999999888788886
No 114
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=88.17 E-value=7.6 Score=34.75 Aligned_cols=93 Identities=9% Similarity=-0.009 Sum_probs=58.2
Q ss_pred HHhhhcCCCC-EEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC-----CCHHHHHHHHHHHHhCCCCEEE
Q psy9602 121 ITLRMAPIID-QMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG-----TCFQEVVELAKHAESLNVHAVL 194 (239)
Q Consensus 121 v~~~~~gg~g-lvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~-----~St~eAIelar~A~~aGAdaVl 194 (239)
++..++.|.. +-+-...| +=..++..+-+..+++.+....+|+|+-..- .+.+-....++.|.++|||.|=
T Consensus 131 ve~Av~~GAdaV~~~i~~G---s~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VK 207 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIG---SEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIK 207 (295)
T ss_dssp HHHHHHTTCSEEEEEECTT---STTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHCCCCEEEEEEECC---CCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEE
Confidence 5566666654 32333344 2235566666667777765546899983211 2333345589999999999887
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 195 CLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 195 V~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
..+| + + -|+.+.+.+ .+||++-
T Consensus 208 t~~t----~---e----~~~~vv~~~-~vPVv~~ 229 (295)
T 3glc_A 208 TYYV----E---K----GFERIVAGC-PVPIVIA 229 (295)
T ss_dssp EECC----T---T----THHHHHHTC-SSCEEEE
T ss_pred eCCC----H---H----HHHHHHHhC-CCcEEEE
Confidence 7633 2 1 268888888 6998863
No 115
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=88.15 E-value=1.5 Score=38.65 Aligned_cols=99 Identities=5% Similarity=-0.010 Sum_probs=63.1
Q ss_pred CCCCEEEeccccCCcCCCHHHHHHHHHHH----HHHh---cCCCce-EEEecCCCCHHHHHHHHHHHH-hCCCCEEEECC
Q psy9602 127 PIIDQMVNGTTGEGVSMTTAERKLNLEAW----MTEA---KTHGFT-VMVQIGGTCFQEVVELAKHAE-SLNVHAVLCLP 197 (239)
Q Consensus 127 gg~glvV~GstGE~~sLT~eER~~li~~v----ve~~---~G~rvp-VIaGVg~~St~eAIelar~A~-~aGAdaVlV~P 197 (239)
|+..++...+.+.......++-..+++.. .+.+ .+ +.. .++-+.-.+.+.+++.++.+. +.|+.++.+.+
T Consensus 54 Gv~~vl~~~~~~~~~~~d~~~~~~~~r~~N~~l~~~~~~~p~-rf~g~~a~vp~~~~~~a~~el~r~~~~~G~~Gv~l~~ 132 (312)
T 3ij6_A 54 NTKQVISLANISPEDFTDSKTSAELCQSANEELSNLVDQHPG-KFAGAVAILPMNNIESACKVISSIKDDENLVGAQIFT 132 (312)
T ss_dssp TEEEEEEECSCCGGGTSCHHHHHHHHHHHHHHHHHHHHHCTT-TEEEEEEECCTTCHHHHHHHHHHHHHCTTEEEEEEES
T ss_pred CCeEEEECCCCcccccCCHHHHHHHHHHHHHHHHHHHHhCCC-ceeeeEEecCccCHHHHHHHHHHHHHhCCCceEeccC
Confidence 33344555555554555666655554333 2222 33 443 455555556788888888885 68999999876
Q ss_pred CCC-CCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 198 ELF-FTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 198 P~y-~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
.+. ..+ +++.+...|+.+.+. ++||.++-
T Consensus 133 ~~~~~~l-~d~~~~p~~~~~~e~--g~pv~iH~ 162 (312)
T 3ij6_A 133 RHLGKSI-ADKEFRPVLAQAAKL--HVPLWMHP 162 (312)
T ss_dssp EETTEET-TSTTTHHHHHHHHHT--TCCEEEEC
T ss_pred CCCCCCC-CCccHHHHHHHHHHc--CCeEEEcC
Confidence 432 223 667888999988875 89999985
No 116
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=88.13 E-value=1 Score=39.04 Aligned_cols=98 Identities=13% Similarity=0.048 Sum_probs=62.5
Q ss_pred cCCCCEEEecccc-CCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC---C
Q psy9602 126 APIIDQMVNGTTG-EGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF---F 201 (239)
Q Consensus 126 ~gg~glvV~GstG-E~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y---~ 201 (239)
.|+...++.+... +...-+.+ .+++.+. .-.+ ++--++|+--...+++++.++.+.+.|+.+|-+.|.+. +
T Consensus 59 ~GV~~~V~~~~~~~~~~~~~N~---~~~~~~~-~~p~-r~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~~~~~~~~~~~ 133 (291)
T 3irs_A 59 AGIEQGVCVGRNSSVLGSVSNA---DVAAVAK-AYPD-KFHPVGSIEAATRKEAMAQMQEILDLGIRIVNLEPGVWATPM 133 (291)
T ss_dssp TTCCEEEEECCEETTTEECCHH---HHHHHHH-HSTT-TEEEEEECCCSSHHHHHHHHHHHHHTTCCCEEECGGGSSSCC
T ss_pred CCCCEEEEcCCCccccccccHH---HHHHHHH-HCCC-cEEEEEecCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCC
Confidence 3555566666543 22112233 3444333 3445 66667787766677888877778899999999985321 2
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 202 TPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 202 ~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
.. +++.+...|+.+.+ . ++||+++--.
T Consensus 134 ~~-~d~~~~~~~~~a~e-~-glpv~iH~~~ 160 (291)
T 3irs_A 134 HV-DDRRLYPLYAFCED-N-GIPVIMMTGG 160 (291)
T ss_dssp CT-TCGGGHHHHHHHHH-T-TCCEEEECSS
T ss_pred CC-CCHHHHHHHHHHHH-c-CCeEEEeCCC
Confidence 22 56778888887766 4 8999999754
No 117
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=88.11 E-value=7.5 Score=36.70 Aligned_cols=65 Identities=11% Similarity=0.079 Sum_probs=45.8
Q ss_pred Cce-EEEecCC-CCHHHHHHHHHHHHhCCCCEEEECCCCCCCC-----------CC----HHHHHHHHHHHHhhCC-CCc
Q psy9602 163 GFT-VMVQIGG-TCFQEVVELAKHAESLNVHAVLCLPELFFTP-----------AS----VEDLVDYLRDVGEAAP-ATP 224 (239)
Q Consensus 163 rvp-VIaGVg~-~St~eAIelar~A~~aGAdaVlV~PP~y~~~-----------~s----~e~iv~yf~~Vaeatp-dLP 224 (239)
++| |++=+.. .+.++..+.++.++++|+|+|.+..-..... .+ ..--.+....|.++++ ++|
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iP 375 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 375 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCc
Confidence 578 8887765 4556899999999999999999998543211 00 1223577788888774 688
Q ss_pred EEE
Q psy9602 225 LFY 227 (239)
Q Consensus 225 IiL 227 (239)
||-
T Consensus 376 VIg 378 (443)
T 1tv5_A 376 IIA 378 (443)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 118
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=88.07 E-value=0.86 Score=39.61 Aligned_cols=61 Identities=11% Similarity=0.077 Sum_probs=45.1
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCC-----------------HHHHHHHHHHHHhh-CCCCcEEE--Ee
Q psy9602 170 IGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPAS-----------------VEDLVDYLRDVGEA-APATPLFY--YH 229 (239)
Q Consensus 170 Vg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s-----------------~e~iv~yf~~Vaea-tpdLPIiL--YN 229 (239)
.+..+.++.++.++..++.|+|++.+--|+.-+..+ -+...+..++|.+. + ++||++ |.
T Consensus 25 ~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~-~~Pv~lm~y~ 103 (268)
T 1qop_A 25 LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP-TIPIGLLMYA 103 (268)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS-SSCEEEEECH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CCCEEEEEcc
Confidence 356667999999999999999999999887422111 13344667888887 6 899977 66
Q ss_pred CC
Q psy9602 230 IP 231 (239)
Q Consensus 230 ~P 231 (239)
+|
T Consensus 104 n~ 105 (268)
T 1qop_A 104 NL 105 (268)
T ss_dssp HH
T ss_pred cH
Confidence 66
No 119
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=87.82 E-value=1.8 Score=39.70 Aligned_cols=87 Identities=11% Similarity=-0.003 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHH---hCCCCEEEECC--CCC--CCCC--CHHHHHHHH
Q psy9602 143 MTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAE---SLNVHAVLCLP--ELF--FTPA--SVEDLVDYL 213 (239)
Q Consensus 143 LT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~---~aGAdaVlV~P--P~y--~~~~--s~e~iv~yf 213 (239)
...+...+-++...+ .. +.||++++.+.+.++-++.++.++ +.|+|++-|-- |.. ...+ +.+.+.+..
T Consensus 109 ~G~~~~~~~l~~~~~--~~-~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il 185 (354)
T 4ef8_A 109 NGFDFYLAYAAEQHD--YG-KKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCL 185 (354)
T ss_dssp CCHHHHHHHHHHTCC--TT-TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHH
T ss_pred cCHHHHHHHHHHHhh--cC-CCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHH
Confidence 445665554443221 11 579999999999999999999998 67999998632 321 1111 678999999
Q ss_pred HHHHhhCCCCcEEEEeCCCC
Q psy9602 214 RDVGEAAPATPLFYYHIPMF 233 (239)
Q Consensus 214 ~~VaeatpdLPIiLYN~P~~ 233 (239)
++|.+++ ++||++==-|..
T Consensus 186 ~av~~~~-~~PV~vKi~p~~ 204 (354)
T 4ef8_A 186 TAVSEVY-PHSFGVKMPPYF 204 (354)
T ss_dssp HHHHHHC-CSCEEEEECCCC
T ss_pred HHHHHhh-CCCeEEEecCCC
Confidence 9999998 899998766653
No 120
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=87.82 E-value=4 Score=37.35 Aligned_cols=88 Identities=8% Similarity=-0.008 Sum_probs=52.8
Q ss_pred hhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECC----
Q psy9602 124 RMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLP---- 197 (239)
Q Consensus 124 ~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~P---- 197 (239)
.++.+.+++ ++.+.| +.+.-.++++.+.+... ++||+++ +.. .+.++.++++|+|++.+..
T Consensus 161 ~~~~G~d~i~i~~~~g-----~~~~~~e~i~~ir~~~~--~~pviv~~v~~------~~~a~~a~~~Gad~I~vg~~~G~ 227 (404)
T 1eep_A 161 LVKAHVDILVIDSAHG-----HSTRIIELIKKIKTKYP--NLDLIAGNIVT------KEAALDLISVGADCLKVGIGPGS 227 (404)
T ss_dssp HHHTTCSEEEECCSCC-----SSHHHHHHHHHHHHHCT--TCEEEEEEECS------HHHHHHHHTTTCSEEEECSSCST
T ss_pred HHHCCCCEEEEeCCCC-----ChHHHHHHHHHHHHHCC--CCeEEEcCCCc------HHHHHHHHhcCCCEEEECCCCCc
Confidence 345555554 433333 23566777888887763 5899974 332 4678889999999999931
Q ss_pred -------CCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 198 -------ELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 198 -------P~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.+ .. .+-+.+.....+.... ++||+.
T Consensus 228 ~~~~~~~~~~-g~-p~~~~l~~v~~~~~~~-~ipVia 261 (404)
T 1eep_A 228 ICTTRIVAGV-GV-PQITAICDVYEACNNT-NICIIA 261 (404)
T ss_dssp TSHHHHHHCC-CC-CHHHHHHHHHHHHTTS-SCEEEE
T ss_pred CcCccccCCC-Cc-chHHHHHHHHHHHhhc-CceEEE
Confidence 111 11 2333444444454456 788874
No 121
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=87.71 E-value=2.3 Score=35.63 Aligned_cols=79 Identities=15% Similarity=0.102 Sum_probs=49.6
Q ss_pred HhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Q psy9602 122 TLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF 201 (239)
Q Consensus 122 ~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~ 201 (239)
+..++.|..+++.|.+ + ..+++.+.+. .+|++.|+. +. +.+..|.+.|+|.+-+.|.
T Consensus 77 ~~A~~~GAd~v~~~~~------d----~~v~~~~~~~----g~~~i~G~~--t~----~e~~~A~~~Gad~v~~fpa--- 133 (207)
T 2yw3_A 77 EAALEAGAAFLVSPGL------L----EEVAALAQAR----GVPYLPGVL--TP----TEVERALALGLSALKFFPA--- 133 (207)
T ss_dssp HHHHHHTCSEEEESSC------C----HHHHHHHHHH----TCCEEEEEC--SH----HHHHHHHHTTCCEEEETTT---
T ss_pred HHHHHcCCCEEEcCCC------C----HHHHHHHHHh----CCCEEecCC--CH----HHHHHHHHCCCCEEEEecC---
Confidence 3445666766655431 1 2455555552 478888854 33 3456678889999999551
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 202 TPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 202 ~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
.. -.=.+|++.+....|++|++
T Consensus 134 ~~---~gG~~~lk~l~~~~~~ipvv 155 (207)
T 2yw3_A 134 EP---FQGVRVLRAYAEVFPEVRFL 155 (207)
T ss_dssp TT---TTHHHHHHHHHHHCTTCEEE
T ss_pred cc---ccCHHHHHHHHhhCCCCcEE
Confidence 11 10147788888888778886
No 122
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=87.65 E-value=3.7 Score=34.58 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=46.0
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++.....+.....+..+.+.+.++|++++.|...- .+...++.+.+. ++|++++|.+.
T Consensus 32 g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~------~~~~~~~~~~~~--~iPvV~~~~~~ 93 (313)
T 3m9w_A 32 GAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ------VLSNVVKEAKQE--GIKVLAYDRMI 93 (313)
T ss_dssp SCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTT------SCHHHHHHHHTT--TCEEEEESSCC
T ss_pred CCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh------hhHHHHHHHHHC--CCeEEEECCcC
Confidence 466777666778888899999999999999999975421 123445555554 79999999754
No 123
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=87.63 E-value=7.6 Score=35.61 Aligned_cols=105 Identities=8% Similarity=0.006 Sum_probs=70.8
Q ss_pred HHhhhcCCCCE-EEeccccCC----cCCCHHHHHHHHHHHHHHhcCCC--ceEEEecC---CCCHHHHHHHHHHHHhCCC
Q psy9602 121 ITLRMAPIIDQ-MVNGTTGEG----VSMTTAERKLNLEAWMTEAKTHG--FTVMVQIG---GTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 121 v~~~~~gg~gl-vV~GstGE~----~sLT~eER~~li~~vve~~~G~r--vpVIaGVg---~~St~eAIelar~A~~aGA 190 (239)
++...+.|... -++.++++. ...|.+|-.+.+..+++.++... +.|.++.. ..+.+..++.++.+.++ |
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a 158 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-V 158 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-C
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-c
Confidence 34445556654 477888885 44588886666666665554323 66666553 44678899999999999 9
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHhhC-CCCcEEEE
Q psy9602 191 HAVLCLPELFFTPASVEDLVDYLRDVGEAA-PATPLFYY 228 (239)
Q Consensus 191 daVlV~PP~y~~~~s~e~iv~yf~~Vaeat-pdLPIiLY 228 (239)
+.+.+..-..+. ++.++.+.++.|.+.. |++||-++
T Consensus 159 ~~i~l~DT~G~~--~P~~~~~lv~~l~~~~~~~~~i~~H 195 (382)
T 2ztj_A 159 DRVGLADTVGVA--TPRQVYALVREVRRVVGPRVDIEFH 195 (382)
T ss_dssp SEEEEEETTSCC--CHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CEEEecCCCCCC--CHHHHHHHHHHHHHhcCCCCeEEEE
Confidence 988887654432 6899999999998873 37888765
No 124
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=87.62 E-value=5.3 Score=32.93 Aligned_cols=78 Identities=6% Similarity=-0.003 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
+..=..++++.+.+.+...+..+++.....+.+...+..+...+.++|++++.|... ...++.+.+ . ++
T Consensus 18 ~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~---------~~~~~~l~~-~-~i 86 (276)
T 3jy6_A 18 DDYFSTELFKGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN---------PQTVQEILH-Q-QM 86 (276)
T ss_dssp TSHHHHHHHHHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC---------HHHHHHHHT-T-SS
T ss_pred CchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc---------HHHHHHHHH-C-CC
Confidence 444556666666665554457777777777888888899999999999999997542 234455554 4 79
Q ss_pred cEEEEeCCC
Q psy9602 224 PLFYYHIPM 232 (239)
Q Consensus 224 PIiLYN~P~ 232 (239)
|+++.|.+.
T Consensus 87 PvV~i~~~~ 95 (276)
T 3jy6_A 87 PVVSVDREM 95 (276)
T ss_dssp CEEEESCCC
T ss_pred CEEEEeccc
Confidence 999998754
No 125
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=87.61 E-value=1.9 Score=36.98 Aligned_cols=79 Identities=11% Similarity=0.081 Sum_probs=51.0
Q ss_pred HhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Q psy9602 122 TLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF 201 (239)
Q Consensus 122 ~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~ 201 (239)
+..++.|.++++.|.+- ..+++.+.+ . ..++|.|+. +..+ +..|.+.|+|.+.+.|.
T Consensus 83 ~~A~~aGAd~v~~p~~d----------~~v~~~ar~-~---g~~~i~Gv~--t~~e----~~~A~~~Gad~vk~Fpa--- 139 (224)
T 1vhc_A 83 VLAKSSGADFVVTPGLN----------PKIVKLCQD-L---NFPITPGVN--NPMA----IEIALEMGISAVKFFPA--- 139 (224)
T ss_dssp HHHHHHTCSEEECSSCC----------HHHHHHHHH-T---TCCEECEEC--SHHH----HHHHHHTTCCEEEETTT---
T ss_pred HHHHHCCCCEEEECCCC----------HHHHHHHHH-h---CCCEEeccC--CHHH----HHHHHHCCCCEEEEeeC---
Confidence 34456667776655321 345565555 2 468888843 3444 46688999999999551
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 202 TPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 202 ~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
.. -.=.+|++++....|++|++
T Consensus 140 ~~---~gG~~~lk~l~~~~~~ipvv 161 (224)
T 1vhc_A 140 EA---SGGVKMIKALLGPYAQLQIM 161 (224)
T ss_dssp TT---TTHHHHHHHHHTTTTTCEEE
T ss_pred cc---ccCHHHHHHHHhhCCCCeEE
Confidence 11 11268899999888778885
No 126
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=87.59 E-value=5.8 Score=33.18 Aligned_cols=63 Identities=6% Similarity=-0.047 Sum_probs=45.2
Q ss_pred CceEEEecCC--CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCC
Q psy9602 163 GFTVMVQIGG--TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMF 233 (239)
Q Consensus 163 rvpVIaGVg~--~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~ 233 (239)
+..+++.... .+.....+..+.+.+.++|++++.|...- .+...++.+.+. ++|++++|.+..
T Consensus 33 g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~------~~~~~~~~~~~~--giPvV~~~~~~~ 97 (297)
T 3rot_A 33 KVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDT------AFSKSLQRANKL--NIPVIAVDTRPK 97 (297)
T ss_dssp TCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSS------TTHHHHHHHHHH--TCCEEEESCCCS
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHH------HHHHHHHHHHHC--CCCEEEEcCCCc
Confidence 4566665544 58888899999999999999999875422 223445566655 799999997643
No 127
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=87.59 E-value=15 Score=33.60 Aligned_cols=83 Identities=16% Similarity=0.162 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHHHhc-----CCCceEEEecCC-CCHHHHHHHHHHHHhCCCCEEEECCCCCCCC-------------C
Q psy9602 144 TTAERKLNLEAWMTEAK-----THGFTVMVQIGG-TCFQEVVELAKHAESLNVHAVLCLPELFFTP-------------A 204 (239)
Q Consensus 144 T~eER~~li~~vve~~~-----G~rvpVIaGVg~-~St~eAIelar~A~~aGAdaVlV~PP~y~~~-------------~ 204 (239)
+.+.-.++++.+.+..+ . ++||++=+.. .+.++..+.++.++++|+|++.+..-....+ .
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~-~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGl 275 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVH-RPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGL 275 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGG-CCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEE
T ss_pred CHHHHHHHHHHHHHHHhhccccC-CceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCc
Confidence 44555677777776521 2 6899997664 3556889999999999999999985321110 0
Q ss_pred ----CHHHHHHHHHHHHhhCC-CCcEEE
Q psy9602 205 ----SVEDLVDYLRDVGEAAP-ATPLFY 227 (239)
Q Consensus 205 ----s~e~iv~yf~~Vaeatp-dLPIiL 227 (239)
-..--.+....|.++++ ++|||.
T Consensus 276 SG~~i~p~a~~~v~~i~~~v~~~ipvI~ 303 (367)
T 3zwt_A 276 SGKPLRDLSTQTIREMYALTQGRVPIIG 303 (367)
T ss_dssp EEGGGHHHHHHHHHHHHHHTTTCSCEEE
T ss_pred CCcccchhHHHHHHHHHHHcCCCceEEE
Confidence 12233577788888875 688874
No 128
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=87.52 E-value=7.3 Score=33.15 Aligned_cols=76 Identities=11% Similarity=0.089 Sum_probs=51.7
Q ss_pred HHHHHHHHHHhcCC-CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 149 KLNLEAWMTEAKTH-GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 149 ~~li~~vve~~~G~-rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.++++-+.+.+... +..+++.....+.....+.++...+.++|++++.|+ +.+.+...++.+.+ . ++|+++
T Consensus 21 ~~~~~gi~~~a~~~~g~~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~------~~~~~~~~~~~~~~-~-~iPvV~ 92 (325)
T 2x7x_A 21 HKMNDEILREAMFYNGVSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISAN------EAAPMTPIVEEAYQ-K-GIPVIL 92 (325)
T ss_dssp HHHHHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCS------SHHHHHHHHHHHHH-T-TCCEEE
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCC------CHHHHHHHHHHHHH-C-CCeEEE
Confidence 34555555555432 467777666677888888888888899999999863 22334455555554 4 799999
Q ss_pred EeCCC
Q psy9602 228 YHIPM 232 (239)
Q Consensus 228 YN~P~ 232 (239)
+|.+.
T Consensus 93 ~~~~~ 97 (325)
T 2x7x_A 93 VDRKI 97 (325)
T ss_dssp ESSCC
T ss_pred eCCCC
Confidence 98753
No 129
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=87.38 E-value=1.6 Score=38.58 Aligned_cols=66 Identities=14% Similarity=0.143 Sum_probs=48.8
Q ss_pred EecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-----------------CHHHHHHHHHHHHhhCCCCcEEE--E
Q psy9602 168 VQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-----------------SVEDLVDYLRDVGEAAPATPLFY--Y 228 (239)
Q Consensus 168 aGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-----------------s~e~iv~yf~~VaeatpdLPIiL--Y 228 (239)
+-.|..+.+.+++.++..++.|||.+-+--|+.-+.. +-+.+++..+++.+..+++|+++ |
T Consensus 26 i~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y 105 (271)
T 3nav_A 26 VTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMY 105 (271)
T ss_dssp EETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEEC
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 3568889999999999999999999999999831111 22355667777776623899977 7
Q ss_pred eCCCC
Q psy9602 229 HIPMF 233 (239)
Q Consensus 229 N~P~~ 233 (239)
-+|..
T Consensus 106 ~n~v~ 110 (271)
T 3nav_A 106 ANLVY 110 (271)
T ss_dssp HHHHH
T ss_pred CcHHH
Confidence 67743
No 130
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=87.23 E-value=1 Score=40.31 Aligned_cols=68 Identities=15% Similarity=0.083 Sum_probs=42.6
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC--CHHHHHHHHHHHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA--SVEDLVDYLRDVG 217 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~--s~e~iv~yf~~Va 217 (239)
..++.-+ .+..+.+.+ + ++|||+.=+=.+.+++.+.. .+|||+|++..|..+... .++.+.++++.+.
T Consensus 234 ~g~~~~~---~l~~v~~~~-~-~ipvia~GGI~~~~d~~k~l----~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~ 303 (349)
T 1p0k_A 234 WGISTAA---SLAEIRSEF-P-ASTMIASGGLQDALDVAKAI----ALGASCTGMAGHFLKALTDSGEEGLLEEIQLIL 303 (349)
T ss_dssp CSCCHHH---HHHHHHHHC-T-TSEEEEESSCCSHHHHHHHH----HTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccHHH---HHHHHHHhc-C-CCeEEEECCCCCHHHHHHHH----HcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHH
Confidence 3455544 344455554 4 79999876667777777654 369999999998876521 2344444444443
No 131
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=87.23 E-value=4.7 Score=36.07 Aligned_cols=74 Identities=14% Similarity=0.005 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH--------HHHHHHH
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVED--------LVDYLRD 215 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~--------iv~yf~~ 215 (239)
.+.-.++++.+.+..++ .||+.| +. + .+.++.|+++|||+|.+..-......+... ......+
T Consensus 133 ~~~~~~~i~~lr~~~~~--~~vi~G~v~--s----~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~ 204 (336)
T 1ypf_A 133 SNAVINMIQHIKKHLPE--SFVIAGNVG--T----PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRW 204 (336)
T ss_dssp SHHHHHHHHHHHHHCTT--SEEEEEEEC--S----HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCC--CEEEECCcC--C----HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHH
Confidence 34566788888887753 688877 43 2 467889999999999995311111101111 3567778
Q ss_pred HHhhCCCCcEEE
Q psy9602 216 VGEAAPATPLFY 227 (239)
Q Consensus 216 VaeatpdLPIiL 227 (239)
++++. ++|||.
T Consensus 205 v~~~~-~ipVIa 215 (336)
T 1ypf_A 205 CAKAA-SKPIIA 215 (336)
T ss_dssp HHHTC-SSCEEE
T ss_pred HHHHc-CCcEEE
Confidence 88888 899875
No 132
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=87.18 E-value=0.48 Score=41.46 Aligned_cols=65 Identities=9% Similarity=-0.048 Sum_probs=45.5
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE--Ee-CCCCccc
Q psy9602 165 TVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY--YH-IPMFTRV 236 (239)
Q Consensus 165 pVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL--YN-~P~~TG~ 236 (239)
-+++|- .+.+...+.++...+.|+|++.+---. . .+.+.+++..+++.+ + ++||+| |+ +|...|+
T Consensus 11 ~i~~gD--P~~~~t~~~~~~l~~~GaD~ielG~S~--G-vt~~~~~~~v~~ir~-~-~~Pivlm~y~~n~i~~G~ 78 (240)
T 1viz_A 11 HVFKLD--PNKDLPDEQLEILCESGTDAVIIGGSD--G-VTEDNVLRMMSKVRR-F-LVPCVLEVSAIEAIVPGF 78 (240)
T ss_dssp EEEEEC--TTSCCCHHHHHHHHTSCCSEEEECC-------CHHHHHHHHHHHTT-S-SSCEEEECSCGGGCCSCC
T ss_pred EEEeeC--CCccccHHHHHHHHHcCCCEEEECCCC--C-CCHHHHHHHHHHhhC-c-CCCEEEecCccccccCCC
Confidence 344443 444445566788899999999998521 2 277889999999987 6 899997 55 6655554
No 133
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=86.71 E-value=0.78 Score=42.58 Aligned_cols=87 Identities=14% Similarity=0.089 Sum_probs=55.3
Q ss_pred CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC--
Q psy9602 127 PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-- 204 (239)
Q Consensus 127 gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-- 204 (239)
|.++++|.|+.|....-.. --.+++..+++.+++ ++|||+.=+=.+-.++++.. .+|||+|++--|+++...
T Consensus 273 Gad~I~vs~~ggr~~~~g~-~~~~~l~~v~~av~~-~ipVia~GGI~~g~Dv~kal----alGAd~V~iGr~~l~~~~~~ 346 (392)
T 2nzl_A 273 GLNGILVSNHGARQLDGVP-ATIDVLPEIVEAVEG-KVEVFLDGGVRKGTDVLKAL----ALGAKAVFVGRPIVWGLAFQ 346 (392)
T ss_dssp TCCEEEECCGGGTSSTTCC-CHHHHHHHHHHHHTT-SSEEEECSSCCSHHHHHHHH----HTTCSEEEECHHHHHHHHHH
T ss_pred CCCEEEeCCCCCCcCCCCc-ChHHHHHHHHHHcCC-CCEEEEECCCCCHHHHHHHH----HhCCCeeEECHHHHHHHHhc
Confidence 4456778777774322221 223556666777777 89999865656666666543 479999999998876531
Q ss_pred CHHHHHHHHHHHHhh
Q psy9602 205 SVEDLVDYLRDVGEA 219 (239)
Q Consensus 205 s~e~iv~yf~~Vaea 219 (239)
.++.+.++++.+.+.
T Consensus 347 g~~gv~~~l~~l~~e 361 (392)
T 2nzl_A 347 GEKGVQDVLEILKEE 361 (392)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 345555666555543
No 134
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=86.66 E-value=0.74 Score=42.26 Aligned_cols=86 Identities=10% Similarity=-0.008 Sum_probs=54.4
Q ss_pred CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC--
Q psy9602 127 PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-- 204 (239)
Q Consensus 127 gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-- 204 (239)
|.+++.|.|+.|....-... -.+++..+++.+.+ ++|||+.=+=.+-.++++. ..+|||+|++--|+.+...
T Consensus 250 Gad~I~vs~~ggr~~~~g~~-~~~~l~~v~~~v~~-~ipVia~GGI~~g~D~~ka----lalGAd~V~iGr~~l~~~~~~ 323 (368)
T 2nli_A 250 GASGIWVSNHGARQLYEAPG-SFDTLPAIAERVNK-RVPIVFDSGVRRGEHVAKA----LASGADVVALGRPVLFGLALG 323 (368)
T ss_dssp TCSEEEECCGGGTSCSSCCC-HHHHHHHHHHHHTT-SSCEEECSSCCSHHHHHHH----HHTTCSEEEECHHHHHHHHHH
T ss_pred CCCEEEEcCCCcCCCCCCCC-hHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHH----HHcCCCEEEECHHHHHHHHhc
Confidence 44567788877743221111 23566667777777 7999986666666666644 3589999999998866521
Q ss_pred CHHHHHHHHHHHHh
Q psy9602 205 SVEDLVDYLRDVGE 218 (239)
Q Consensus 205 s~e~iv~yf~~Vae 218 (239)
.++.+.++++.+.+
T Consensus 324 G~~gv~~~l~~l~~ 337 (368)
T 2nli_A 324 GWQGAYSVLDYFQK 337 (368)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH
Confidence 34555555555544
No 135
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=86.62 E-value=4.5 Score=33.92 Aligned_cols=78 Identities=13% Similarity=0.069 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
..=..++++-+.+.+...+..+++.....+.+...++.+...+.++|++++.|+.. + +. .++.+.+ . ++|
T Consensus 24 ~~f~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~----~-~~---~~~~l~~-~-~iP 93 (295)
T 3hcw_A 24 NPFYINVLLGISETCNQHGYGTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKE----N-DP---IKQMLID-E-SMP 93 (295)
T ss_dssp CHHHHHHHHHHHHHHHTTTCEEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCT----T-CH---HHHHHHH-T-TCC
T ss_pred ChHHHHHHHHHHHHHHHCCCEEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCccc----C-hH---HHHHHHh-C-CCC
Confidence 33445566666555554357777777777777778888889999999999997542 1 12 3344444 4 799
Q ss_pred EEEEeCCC
Q psy9602 225 LFYYHIPM 232 (239)
Q Consensus 225 IiLYN~P~ 232 (239)
++++|.+.
T Consensus 94 vV~i~~~~ 101 (295)
T 3hcw_A 94 FIVIGKPT 101 (295)
T ss_dssp EEEESCCC
T ss_pred EEEECCCC
Confidence 99998764
No 136
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=86.60 E-value=4.3 Score=37.93 Aligned_cols=64 Identities=13% Similarity=0.009 Sum_probs=40.5
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
++..++.+..++++.++.- . .+...++++.+.+.. ++||++|... + .+.++.+.++|||+|.+.
T Consensus 149 ~~~lveaGvdvIvldta~G---~-~~~~~e~I~~ik~~~---~i~Vi~g~V~-t----~e~A~~a~~aGAD~I~vG 212 (400)
T 3ffs_A 149 AKLLVEAGVDVIVLDSAHG---H-SLNIIRTLKEIKSKM---NIDVIVGNVV-T----EEATKELIENGADGIKVG 212 (400)
T ss_dssp HHHHHHHTCSEEEECCSCC---S-BHHHHHHHHHHHTTC---CCEEEEEEEC-S----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEeCCCC---C-cccHHHHHHHHHhcC---CCeEEEeecC-C----HHHHHHHHHcCCCEEEEe
Confidence 3445677788777643321 1 244456666666554 4799984322 2 556788889999999994
No 137
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=86.59 E-value=2.9 Score=34.45 Aligned_cols=77 Identities=10% Similarity=0.097 Sum_probs=51.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHH-HHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLR-DVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~-~Vaeatpd 222 (239)
+..=..++++.+.+.+...+..+++.....+.....++.+...+.++|++++.| . +++ .++ .+.+ . +
T Consensus 19 ~~~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~-----~-~~~----~~~~~l~~-~-~ 86 (277)
T 3e61_A 19 SNPFFTLIARGVEDVALAHGYQVLIGNSDNDIKKAQGYLATFVSHNCTGMISTA-----F-NEN----IIENTLTD-H-H 86 (277)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSEEEECG-----G-GHH----HHHHHHHH-C--
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEec-----C-ChH----HHHHHHHc-C-C
Confidence 334445555555554443356777777777888888899999999999999986 2 323 244 4544 4 7
Q ss_pred CcEEEEeCCC
Q psy9602 223 TPLFYYHIPM 232 (239)
Q Consensus 223 LPIiLYN~P~ 232 (239)
+|++++|.+.
T Consensus 87 iPvV~~~~~~ 96 (277)
T 3e61_A 87 IPFVFIDRIN 96 (277)
T ss_dssp CCEEEGGGCC
T ss_pred CCEEEEeccC
Confidence 9999998864
No 138
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=86.46 E-value=5 Score=36.91 Aligned_cols=84 Identities=13% Similarity=-0.007 Sum_probs=54.2
Q ss_pred ccCCcCCCHHHHHHHHHHHH----HHhcCCCceEEEecC----------CCCHHHHHHHHHHHHhCCCCEEEECCCCCCC
Q psy9602 137 TGEGVSMTTAERKLNLEAWM----TEAKTHGFTVMVQIG----------GTCFQEVVELAKHAESLNVHAVLCLPELFFT 202 (239)
Q Consensus 137 tGE~~sLT~eER~~li~~vv----e~~~G~rvpVIaGVg----------~~St~eAIelar~A~~aGAdaVlV~PP~y~~ 202 (239)
+.|+--.+.+.|.+++..++ +.++. . ||.+=++ ..+.++++++++..++.|+|.+-+..+.+..
T Consensus 215 ~D~yGG~slenR~r~~~eiv~aVr~avg~-~-~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~ 292 (379)
T 3aty_A 215 SGPYAGTTIDTRCQLIYDVTKSVCDAVGS-D-RVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN 292 (379)
T ss_dssp SSTTCTTSHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS
T ss_pred cCCCCccChhhhHHHHHHHHHHHHHhcCC-C-eEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC
Confidence 45554447777765555444 44543 3 6666222 3467889999999999999999998754311
Q ss_pred CCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 203 PASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 203 ~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.-+. + .+.|.+.+ ++||+.
T Consensus 293 ~~~~~---~-~~~ir~~~-~iPvi~ 312 (379)
T 3aty_A 293 QQIGD---V-VAWVRGSY-SGVKIS 312 (379)
T ss_dssp CCCCC---H-HHHHHTTC-CSCEEE
T ss_pred CCccH---H-HHHHHHHC-CCcEEE
Confidence 10011 4 66777888 799886
No 139
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=86.42 E-value=9.4 Score=34.10 Aligned_cols=76 Identities=12% Similarity=-0.011 Sum_probs=60.4
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecCC---CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG---TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVG 217 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg~---~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Va 217 (239)
..+|.+|-..-++.++..++ +.||++-.-. .|.+++++.+....+.||++|-+-- ..++.+..+.|.
T Consensus 70 ~~vtldem~~h~~aV~r~~~--~~~vvaD~pfgsY~s~~~a~~~a~rl~kaGa~aVklEd--------g~~~~~~i~~l~ 139 (275)
T 3vav_A 70 LPVTLDDIAYHTACVARAQP--RALIVADLPFGTYGTPADAFASAVKLMRAGAQMVKFEG--------GEWLAETVRFLV 139 (275)
T ss_dssp TTCCHHHHHHHHHHHHHTCC--SSEEEEECCTTSCSSHHHHHHHHHHHHHTTCSEEEEEC--------CGGGHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHhcCC--CCCEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEECC--------chhHHHHHHHHH
Confidence 46899999999999998765 5899995532 6899999999998889999999873 234566777777
Q ss_pred hhCCCCcEEEE
Q psy9602 218 EAAPATPLFYY 228 (239)
Q Consensus 218 eatpdLPIiLY 228 (239)
++ ++|++-+
T Consensus 140 ~~--GIpv~gH 148 (275)
T 3vav_A 140 ER--AVPVCAH 148 (275)
T ss_dssp HT--TCCEEEE
T ss_pred HC--CCCEEEe
Confidence 75 7999854
No 140
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=86.39 E-value=4.8 Score=32.76 Aligned_cols=62 Identities=11% Similarity=0.125 Sum_probs=44.2
Q ss_pred CceEEEec--CCCCHHHHHHHHHHHHhCC-CCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQI--GGTCFQEVVELAKHAESLN-VHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGV--g~~St~eAIelar~A~~aG-AdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++.. +..+.+...+..+...+.+ +|++++.|... .. ....++.+.+. ++|++++|.+.
T Consensus 30 g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~-~~-----~~~~~~~~~~~--~ipvV~~~~~~ 94 (276)
T 3ksm_A 30 GVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSA-ED-----LTPSVAQYRAR--NIPVLVVDSDL 94 (276)
T ss_dssp TCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSST-TT-----THHHHHHHHHT--TCCEEEESSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCH-HH-----HHHHHHHHHHC--CCcEEEEecCC
Confidence 35666655 5678888889999999999 99999987532 11 23345555554 79999998754
No 141
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=86.13 E-value=4.3 Score=34.66 Aligned_cols=66 Identities=9% Similarity=0.011 Sum_probs=45.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHH-HhCCCCEEEECCCCC------CCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHA-ESLNVHAVLCLPELF------FTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A-~~aGAdaVlV~PP~y------~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
++--++++.-...+++++.++.+ .+.|+.+|-+.+.++ ....+++.+...|+.+.+. ++||+++--
T Consensus 94 r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~--~lpv~iH~~ 166 (327)
T 2dvt_A 94 RFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL--DVPFYLHPR 166 (327)
T ss_dssp TEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH--TCCEEEECC
T ss_pred ceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc--CCeEEECCC
Confidence 45445666666677788888887 467999998766443 1112566777777777665 899999853
No 142
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=85.91 E-value=4 Score=33.77 Aligned_cols=75 Identities=12% Similarity=0.134 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++-+.+.+...+..+++.....+.+...++.+...+.++|++++.|+.. + + ..++.+.+ . ++|+++
T Consensus 28 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~----~-~---~~~~~l~~-~-~iPvV~ 97 (292)
T 3k4h_A 28 FPEVIRGISSFAHVEGYALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSRE----N-D---RIIQYLHE-Q-NFPFVL 97 (292)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBT----T-C---HHHHHHHH-T-TCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCC----C-h---HHHHHHHH-C-CCCEEE
Confidence 44455555444443356777777777777778888889999999999987542 1 1 23445544 4 799999
Q ss_pred EeCCC
Q psy9602 228 YHIPM 232 (239)
Q Consensus 228 YN~P~ 232 (239)
+|.+.
T Consensus 98 ~~~~~ 102 (292)
T 3k4h_A 98 IGKPY 102 (292)
T ss_dssp ESCCS
T ss_pred ECCCC
Confidence 98764
No 143
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=85.83 E-value=4.7 Score=33.48 Aligned_cols=79 Identities=15% Similarity=0.108 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
+..=..++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|... . + ..++.+.+ . ++
T Consensus 19 ~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~---~---~~~~~~~~-~-~i 88 (291)
T 3egc_A 19 ENVFFAEVASGVESEARHKGYSVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG--E---H---DYLRTELP-K-TF 88 (291)
T ss_dssp TSHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS--C---C---HHHHHSSC-T-TS
T ss_pred cchHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC--C---h---HHHHHhhc-c-CC
Confidence 334445555555554443357777777777888888899999999999999998654 2 1 23344433 4 79
Q ss_pred cEEEEeCCC
Q psy9602 224 PLFYYHIPM 232 (239)
Q Consensus 224 PIiLYN~P~ 232 (239)
|++++|.+.
T Consensus 89 PvV~~~~~~ 97 (291)
T 3egc_A 89 PIVAVNREL 97 (291)
T ss_dssp CEEEESSCC
T ss_pred CEEEEeccc
Confidence 999999864
No 144
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=85.79 E-value=2.2 Score=36.94 Aligned_cols=79 Identities=14% Similarity=0.198 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC--------------------CCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL--------------------FFTP 203 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~--------------------y~~~ 203 (239)
+.+.-.++++.+.+.+ ++||++-+.. +..+..++++.++++|+|++.+.... +..+
T Consensus 148 ~~~~~~eii~~v~~~~---~~pv~vk~~~-~~~~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~ 223 (311)
T 1ep3_A 148 DPEVAAALVKACKAVS---KVPLYVKLSP-NVTDIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGP 223 (311)
T ss_dssp CHHHHHHHHHHHHHHC---SSCEEEEECS-CSSCSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESG
T ss_pred CHHHHHHHHHHHHHhc---CCCEEEEECC-ChHHHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCc
Confidence 4555578888887765 4799886653 22345677899999999999996411 0011
Q ss_pred CCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 204 ASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 204 ~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.......++.+.+.+.+ ++||+.
T Consensus 224 ~~~~~~~~~i~~i~~~~-~ipvia 246 (311)
T 1ep3_A 224 AIKPVALKLIHQVAQDV-DIPIIG 246 (311)
T ss_dssp GGHHHHHHHHHHHHTTC-SSCEEE
T ss_pred cchHHHHHHHHHHHHhc-CCCEEE
Confidence 01112357888898888 899874
No 145
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=85.70 E-value=4.8 Score=35.55 Aligned_cols=65 Identities=12% Similarity=0.172 Sum_probs=44.7
Q ss_pred CceEEEec----CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHH---HHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQI----GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRD---VGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGV----g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~---VaeatpdLPIiLYN~P 231 (239)
++.||+.- ...+.++.+++.+.+++.|||-+=+.... . +.++..+-++. +.+..++.|+|.|+.=
T Consensus 159 ~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~GaDIvKia~~a---~-s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 230 (276)
T 3o1n_A 159 NVAVIMSNHDFHKTPAAEEIVQRLRKMQELGADIPKIAVMP---Q-TKADVLTLLTATVEMQERYADRPIITMSMS 230 (276)
T ss_dssp TCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEECC---S-SHHHHHHHHHHHHHHHHHTCCSCCEEEECS
T ss_pred CCEEEEEeecCCCCcCHHHHHHHHHHHHHcCCCEEEEEecC---C-ChHHHHHHHHHHHHHHhcCCCCCEEEEECC
Confidence 67888853 24567899999999999999987665322 2 55555555444 4443247999999874
No 146
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=85.70 E-value=3.3 Score=38.77 Aligned_cols=93 Identities=11% Similarity=0.003 Sum_probs=55.7
Q ss_pred HHhhhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC
Q psy9602 121 ITLRMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL 199 (239)
Q Consensus 121 v~~~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~ 199 (239)
+.+.++.|...+ +....|. .+...++++.+.+... ++||++|-. .+.++ ++.+.++|+|++.+..-.
T Consensus 242 a~~l~~aGvd~v~i~~~~G~-----~~~~~e~i~~i~~~~p--~~pvi~g~~-~t~e~----a~~l~~~G~d~I~v~~~~ 309 (494)
T 1vrd_A 242 VEKLVKAGVDVIVIDTAHGH-----SRRVIETLEMIKADYP--DLPVVAGNV-ATPEG----TEALIKAGADAVKVGVGP 309 (494)
T ss_dssp HHHHHHTTCSEEEECCSCCS-----SHHHHHHHHHHHHHCT--TSCEEEEEE-CSHHH----HHHHHHTTCSEEEECSSC
T ss_pred HHHHHHhCCCEEEEEecCCc-----hHHHHHHHHHHHHHCC--CceEEeCCc-CCHHH----HHHHHHcCCCEEEEcCCC
Confidence 344456666554 4344442 2566778888888774 489988633 34444 477788999999994311
Q ss_pred ----------CCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 200 ----------FFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 200 ----------y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.+.. .+-..+.......... ++||+.
T Consensus 310 G~~~~~~~~~~~g~-p~~~~l~~v~~~~~~~-~ipvia 345 (494)
T 1vrd_A 310 GSICTTRVVAGVGV-PQLTAVMECSEVARKY-DVPIIA 345 (494)
T ss_dssp STTCHHHHHHCCCC-CHHHHHHHHHHHHHTT-TCCEEE
T ss_pred CccccccccCCCCc-cHHHHHHHHHHHHhhc-CCCEEE
Confidence 0112 3444445555555556 788875
No 147
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=85.68 E-value=7.3 Score=32.31 Aligned_cols=79 Identities=8% Similarity=-0.061 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHhcCCCc-eEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGF-TVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rv-pVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
.=...+++-+.+.+...+. .+++.....+.....+..+.+.+.++|++++.|... ......++.+.+ . ++|
T Consensus 15 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~------~~~~~~~~~~~~-~-~iP 86 (309)
T 2fvy_A 15 NFMSVVRKAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDP------AAAGTVIEKARG-Q-NVP 86 (309)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSG------GGHHHHHHHHHT-T-TCC
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc------chhHHHHHHHHH-C-CCc
Confidence 3344566666655554344 677766667788888888888889999999986432 112234445544 4 799
Q ss_pred EEEEeCCC
Q psy9602 225 LFYYHIPM 232 (239)
Q Consensus 225 IiLYN~P~ 232 (239)
++++|.+.
T Consensus 87 vV~~~~~~ 94 (309)
T 2fvy_A 87 VVFFNKEP 94 (309)
T ss_dssp EEEESSCC
T ss_pred EEEecCCC
Confidence 99999863
No 148
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=85.51 E-value=4.3 Score=34.33 Aligned_cols=66 Identities=6% Similarity=-0.092 Sum_probs=42.8
Q ss_pred CceEEEecCCCCHHHHHHHHHHHH-hCCCCEEEECCCCC-CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAE-SLNVHAVLCLPELF-FTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~-~aGAdaVlV~PP~y-~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+...++.+.....+++++.++.+. +.|+.+|.+.+.+. +.. +++.+...|+.+.+ . ++||+++--.
T Consensus 90 r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~~~~-~~~~~~~~~~~a~~-~-~lpv~iH~~~ 157 (307)
T 2f6k_A 90 QLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRGLYF-GSPVLERVYQELDA-R-QAIVALHPNE 157 (307)
T ss_dssp TEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETTEET-TCGGGHHHHHHHHT-T-TCEEEEECCC
T ss_pred ceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCCCCC-CcHhHHHHHHHHHH-c-CCeEEECCCC
Confidence 443333333355678888887776 58999997766432 223 55667777776655 5 8999998653
No 149
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=85.48 E-value=2.3 Score=37.81 Aligned_cols=63 Identities=17% Similarity=0.185 Sum_probs=46.1
Q ss_pred CceEEEecCCC-CHHHHHHHHHHHHhCCCCEEEECC------CCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGGT-CFQEVVELAKHAESLNVHAVLCLP------ELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~~-St~eAIelar~A~~aGAdaVlV~P------P~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.-||+|.++. |.+.++++++.++++|++++-... |+.|+... ++-+..++++++.. ++|++-
T Consensus 38 ~~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g-~~gl~~l~~~~~~~-Gl~~~t 107 (276)
T 1vs1_A 38 SKAVIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLG-LEGLKLLRRAGDEA-GLPVVT 107 (276)
T ss_dssp BCEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCT-HHHHHHHHHHHHHH-TCCEEE
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCC-HHHHHHHHHHHHHc-CCcEEE
Confidence 46788888754 889999999999999999976542 33233313 45567777888888 899873
No 150
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=85.37 E-value=3.4 Score=35.89 Aligned_cols=66 Identities=11% Similarity=0.037 Sum_probs=46.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHHH-hCCCCEEEECCCCC-CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAE-SLNVHAVLCLPELF-FTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~-~aGAdaVlV~PP~y-~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
++.-++++--...+++++.++.+. +.|+.+|.+.+-+. +.. +++.+...|+.+.+. ++||+++-..
T Consensus 110 r~~~~~~l~~~~~~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l-~d~~~~~~~~~~~e~--~lpv~iH~~~ 177 (336)
T 2wm1_A 110 RFVGLGTLPMQAPELAVKEMERCVKELGFPGVQIGTHVNEWDL-NAQELFPVYAAAERL--KCSLFVHPWD 177 (336)
T ss_dssp TEEEEECCCTTSHHHHHHHHHHHHHTSCCSEEEEESEETTEET-TCGGGHHHHHHHHHH--TCEEEEECCS
T ss_pred ceeEEEeCCCcCHHHHHHHHHHHHHccCCeEEEECCcCCCCCC-CCccHHHHHHHHHHc--CCEEEECCCC
Confidence 454455566666678888888877 67999998765321 122 567788888888776 8999998653
No 151
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=85.31 E-value=1.6 Score=37.98 Aligned_cols=48 Identities=10% Similarity=0.222 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEECCCCC---CCCCCHHHHHHHHHHHHhh
Q psy9602 171 GGTCFQEVVELAKHAESLNVHAVLCLPELF---FTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 171 g~~St~eAIelar~A~~aGAdaVlV~PP~y---~~~~s~e~iv~yf~~Vaea 219 (239)
|..+.++++++++.|.+.|.+.+.++|-+. +.. +.+.+.++|+.+.+.
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~-~~~~i~~~~~~l~~~ 65 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKN-EPAAVREAADQLNKR 65 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEEC-CHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHHH
Confidence 567899999999999999999999987653 333 788999998888765
No 152
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=85.07 E-value=3.4 Score=38.31 Aligned_cols=81 Identities=11% Similarity=0.131 Sum_probs=55.1
Q ss_pred CHHHHH----HHHHHHHHHhcCCCceEEEecCCC----------CHHHHHHHHHHHHhCC------CCEEEECCCCCCC-
Q psy9602 144 TTAERK----LNLEAWMTEAKTHGFTVMVQIGGT----------CFQEVVELAKHAESLN------VHAVLCLPELFFT- 202 (239)
Q Consensus 144 T~eER~----~li~~vve~~~G~rvpVIaGVg~~----------St~eAIelar~A~~aG------AdaVlV~PP~y~~- 202 (239)
|.+.|. ++++.+.+.++. . ||.+=++.. +.++++++++.+++.| +|.+-+..+.+..
T Consensus 216 slenR~rf~~Eiv~aVr~avg~-~-~V~vRls~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~ 293 (402)
T 2hsa_B 216 SLANRCKFITQVVQAVVSAIGA-D-RVGVRVSPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAY 293 (402)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTT
T ss_pred ChhhhhHHHHHHHHHHHHHhCC-C-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccc
Confidence 456674 555556666653 3 777755432 4578999999999999 9999997664321
Q ss_pred ---CC---CHH-HHHHHHHHHHhhCCCCcEEE
Q psy9602 203 ---PA---SVE-DLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 203 ---~~---s~e-~iv~yf~~VaeatpdLPIiL 227 (239)
+. +.. .-.++.+.|.+++ ++|||.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~vk~~~-~iPvi~ 324 (402)
T 2hsa_B 294 GQTEAGRLGSEEEEARLMRTLRNAY-QGTFIC 324 (402)
T ss_dssp TTSSSTTTTHHHHHHHHHHHHHHHC-SSCEEE
T ss_pred cCCccccccCCcchHHHHHHHHHHC-CCCEEE
Confidence 10 112 3467788888898 899885
No 153
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=85.07 E-value=2.2 Score=35.77 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHH
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYL 213 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf 213 (239)
.++++.+.+.+ ++|||++-+-.+.+++.++. +.|||++++..-.+..+.+.+++.++.
T Consensus 185 ~~~i~~l~~~~---~ipvia~GGI~~~~d~~~~~----~~Gadgv~vgsal~~~~~~~~~~~~~l 242 (252)
T 1ka9_F 185 LRLTRMVAEAV---GVPVIASGGAGRMEHFLEAF----QAGAEAALAASVFHFGEIPIPKLKRYL 242 (252)
T ss_dssp HHHHHHHHHHC---SSCEEEESCCCSHHHHHHHH----HTTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHH----HCCCHHHHHHHHHHcCCCCHHHHHHHH
Confidence 55666666665 58999976666666665543 479999999976665544667777764
No 154
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=85.02 E-value=2.1 Score=39.52 Aligned_cols=65 Identities=12% Similarity=0.114 Sum_probs=44.8
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC---CCCC---CHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF---FTPA---SVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y---~~~~---s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+.++|+.++.....+ +..+.++.+|||++.+--.+. ..|. +.+...+..+.|.+.+ ++||++=..
T Consensus 144 ~~~~ianig~~~~~e--~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~-~~PVivK~v 214 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQ--AGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL-QLPFILKEV 214 (365)
T ss_dssp -CCEEEEEETTSCHH--HHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC-CSCEEEEEC
T ss_pred CCcEEEEeCCCCCHH--HHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh-CCCEEEEEC
Confidence 579999888765443 445566678999998764331 1110 3456778899999998 899999864
No 155
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=85.01 E-value=4.4 Score=36.27 Aligned_cols=74 Identities=9% Similarity=0.024 Sum_probs=60.0
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecC--C--CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIG--G--TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDV 216 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg--~--~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~V 216 (239)
..+|.+|-...++.++..++ +.+|++-.. + .|.+++++.+....++||++|-+-- .+++.+-.+.+
T Consensus 58 ~~vTldemi~h~~aV~r~~~--~~~vvaD~pfgsy~~s~~~a~~na~rl~kaGa~aVklEd--------g~e~~~~I~al 127 (275)
T 1o66_A 58 LPVSLRDMCYHTECVARGAK--NAMIVSDLPFGAYQQSKEQAFAAAAELMAAGAHMVKLEG--------GVWMAETTEFL 127 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHCS--SSEEEEECCTTSSSSCHHHHHHHHHHHHHTTCSEEEEEC--------SGGGHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhCC--CCeEEEECCCCCccCCHHHHHHHHHHHHHcCCcEEEECC--------cHHHHHHHHHH
Confidence 46899999999999998875 457777443 3 4799999999999999999999873 35678888888
Q ss_pred HhhCCCCcEE
Q psy9602 217 GEAAPATPLF 226 (239)
Q Consensus 217 aeatpdLPIi 226 (239)
.++ ++|++
T Consensus 128 ~~a--gIpV~ 135 (275)
T 1o66_A 128 QMR--GIPVC 135 (275)
T ss_dssp HHT--TCCEE
T ss_pred HHc--CCCeE
Confidence 886 69988
No 156
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=84.98 E-value=2.9 Score=37.57 Aligned_cols=70 Identities=16% Similarity=0.175 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecC--CC---------------CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQIG--GT---------------CFQEVVELAKHAESLNVHAVLCLPELFFTPASVED 208 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGVg--~~---------------St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~ 208 (239)
+|..+.++.+++. ++||+.++| .. ..+++++.++..+++||+++++--. + .+
T Consensus 136 ~e~~~~I~al~~a----gIpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v----p---~~ 204 (281)
T 1oy0_A 136 ERVAEQIACLTAA----GIPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMV----P---AE 204 (281)
T ss_dssp GGGHHHHHHHHHH----TCCEEEEEECCC--------------CHHHHHHHHHHHHHHHHTCSEEEEESC----C---HH
T ss_pred HHHHHHHHHHHHC----CCCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecC----C---HH
Confidence 3666777777664 589884332 22 2478999999999999999998642 2 22
Q ss_pred HHHHHHHHHhhCCCCcEEEEeC
Q psy9602 209 LVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 209 iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+ .+.|.++. ++|+|-.-.
T Consensus 205 ~---a~~it~~l-~iP~igIGa 222 (281)
T 1oy0_A 205 L---ATQITGKL-TIPTVGIGA 222 (281)
T ss_dssp H---HHHHHHHC-SSCEEEESS
T ss_pred H---HHHHHHhC-CCCEEEeCC
Confidence 2 56889999 799987654
No 157
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=84.96 E-value=11 Score=34.44 Aligned_cols=90 Identities=12% Similarity=0.024 Sum_probs=52.2
Q ss_pred hhhcCCCCEEEe-ccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC-CCC
Q psy9602 123 LRMAPIIDQMVN-GTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP-ELF 200 (239)
Q Consensus 123 ~~~~gg~glvV~-GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P-P~y 200 (239)
..++.+..++++ ...|. .+...+.++.+.+.. ++|||+|... + .+.++.+.++|||+|.+.- |-.
T Consensus 112 ~l~eaGad~I~ld~a~G~-----~~~~~~~i~~i~~~~---~~~Vivg~v~-t----~e~A~~l~~aGaD~I~VG~~~Gs 178 (361)
T 3khj_A 112 LLVEAGVDVIVLDSAHGH-----SLNIIRTLKEIKSKM---NIDVIVGNVV-T----EEATKELIENGADGIKVGIGPGS 178 (361)
T ss_dssp HHHHTTCSEEEECCSCCS-----BHHHHHHHHHHHHHC---CCEEEEEEEC-S----HHHHHHHHHTTCSEEEECSSCCT
T ss_pred HHHHcCcCeEEEeCCCCC-----cHHHHHHHHHHHHhc---CCcEEEccCC-C----HHHHHHHHHcCcCEEEEecCCCc
Confidence 345666666544 33332 245566777777765 4799984332 2 4567888899999999941 211
Q ss_pred ---------CCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 201 ---------FTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 201 ---------~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.. .+-..+.....++... ++|||.
T Consensus 179 ~~~tr~~~g~g~-p~~~~i~~v~~~~~~~-~iPVIA 212 (361)
T 3khj_A 179 ICTTRIVAGVGV-PQITAIEKCSSVASKF-GIPIIA 212 (361)
T ss_dssp TCCHHHHTCBCC-CHHHHHHHHHHHHHHH-TCCEEE
T ss_pred CCCcccccCCCC-CcHHHHHHHHHHHhhc-CCeEEE
Confidence 111 3333444444445556 789874
No 158
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=84.88 E-value=8.4 Score=31.92 Aligned_cols=76 Identities=12% Similarity=0.083 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++.+.+.+...+..+++.....+.+...+..+...+.++|++++.|... . .+...++.+.+ . ++|+++
T Consensus 16 ~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-~-----~~~~~~~~~~~-~-~iPvV~ 87 (283)
T 2ioy_A 16 FVTLKNGAEEKAKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDS-D-----AVVTAIKEANS-K-NIPVIT 87 (283)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSST-T-----TTHHHHHHHHH-T-TCCEEE
T ss_pred HHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCch-h-----hhHHHHHHHHH-C-CCeEEE
Confidence 33444444433322135666666667777778888888889999999986431 1 12223445544 4 799999
Q ss_pred EeCC
Q psy9602 228 YHIP 231 (239)
Q Consensus 228 YN~P 231 (239)
+|.+
T Consensus 88 ~~~~ 91 (283)
T 2ioy_A 88 IDRS 91 (283)
T ss_dssp ESSC
T ss_pred ecCC
Confidence 9875
No 159
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=84.72 E-value=0.8 Score=42.24 Aligned_cols=88 Identities=11% Similarity=0.111 Sum_probs=55.9
Q ss_pred cCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-
Q psy9602 126 APIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA- 204 (239)
Q Consensus 126 ~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~- 204 (239)
.|.++++|.|+.|-...-. .--.+++..+++.+.+ ++|||+.=+=.+-.++++. ..+|||+|++--|+.|...
T Consensus 237 ~GaD~I~vsn~GG~~~d~~-~~~~~~L~~i~~av~~-~ipVia~GGI~~g~Dv~ka----LalGA~aV~iGr~~l~~l~~ 310 (352)
T 3sgz_A 237 HNVQGIVVSNHGGRQLDEV-SASIDALREVVAAVKG-KIEVYMDGGVRTGTDVLKA----LALGARCIFLGRPILWGLAC 310 (352)
T ss_dssp TTCSEEEECCGGGTSSCSS-CCHHHHHHHHHHHHTT-SSEEEEESSCCSHHHHHHH----HHTTCSEEEESHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCccCCC-ccHHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHH----HHcCCCEEEECHHHHHHHHh
Confidence 3455677878777422111 1124566666677777 8999986555666666654 3479999999999876431
Q ss_pred -CHHHHHHHHHHHHhh
Q psy9602 205 -SVEDLVDYLRDVGEA 219 (239)
Q Consensus 205 -s~e~iv~yf~~Vaea 219 (239)
.++.+.++++.+.+.
T Consensus 311 ~G~~gv~~~l~~l~~e 326 (352)
T 3sgz_A 311 KGEDGVKEVLDILTAE 326 (352)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHH
Confidence 355566666655543
No 160
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=84.63 E-value=2.2 Score=39.27 Aligned_cols=63 Identities=17% Similarity=0.174 Sum_probs=46.4
Q ss_pred CceEEEecCC-CCHHHHHHHHHHHHhCCCCEEEEC------CCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGG-TCFQEVVELAKHAESLNVHAVLCL------PELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~-~St~eAIelar~A~~aGAdaVlV~------PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
++-||+|.++ .|.+.++++++.++++|++++-.. .||.|+... ++-+..++++++.. ++|++-
T Consensus 106 ~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg-~egl~~l~~~~~e~-Gl~~~t 175 (350)
T 1vr6_A 106 YFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLG-EKGLEYLREAADKY-GMYVVT 175 (350)
T ss_dssp EEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCT-HHHHHHHHHHHHHH-TCEEEE
T ss_pred CeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCC-HHHHHHHHHHHHHc-CCcEEE
Confidence 4568888764 489999999999999999987554 233344323 45567777888888 899874
No 161
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=84.61 E-value=8 Score=39.66 Aligned_cols=84 Identities=18% Similarity=0.079 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECC--CCCCC---------CCCHHHHHHH
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLP--ELFFT---------PASVEDLVDY 212 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~P--P~y~~---------~~s~e~iv~y 212 (239)
.+...+-++.+.+... +.|+++++ .+.+.++..+.++.+++.|+|++.+-- |.... . +.+.+.+.
T Consensus 618 ~~~~~~~i~~~~~~~~--~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~-~~~~~~~i 694 (1025)
T 1gte_A 618 AAYWCQSVTELKADFP--DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQ-DPELVRNI 694 (1025)
T ss_dssp HHHHHHHHHHHHHHCT--TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGG-CHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC--CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCccccccc-CHHHHHHH
Confidence 4444444444444432 46999988 467899999999999999999999953 33211 2 56788899
Q ss_pred HHHHHhhCCCCcEEEEeCCC
Q psy9602 213 LRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 213 f~~VaeatpdLPIiLYN~P~ 232 (239)
++.|.+++ ++||++=-.|.
T Consensus 695 v~~v~~~~-~~Pv~vK~~~~ 713 (1025)
T 1gte_A 695 CRWVRQAV-QIPFFAKLTPN 713 (1025)
T ss_dssp HHHHHHHC-SSCEEEEECSC
T ss_pred HHHHHHhh-CCceEEEeCCC
Confidence 99999998 89999866554
No 162
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=84.56 E-value=3.3 Score=37.14 Aligned_cols=84 Identities=11% Similarity=0.053 Sum_probs=59.3
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC-CCCHHHHHHHHHHHHhCCCCEEEECCCC
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG-GTCFQEVVELAKHAESLNVHAVLCLPEL 199 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg-~~St~eAIelar~A~~aGAdaVlV~PP~ 199 (239)
++...+-|.+++-...++|. ++.+++.+ ++||++-=| ..+.+++++.++.|.++||+++.+.--.
T Consensus 195 ariA~elGAD~VKt~~t~e~-----------~~~vv~~~---~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI 260 (295)
T 3glc_A 195 TRIAAEMGAQIIKTYYVEKG-----------FERIVAGC---PVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNI 260 (295)
T ss_dssp HHHHHHTTCSEEEEECCTTT-----------HHHHHHTC---SSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHhCCCEEEeCCCHHH-----------HHHHHHhC---CCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHH
Confidence 34455677887755555432 34445443 589887222 2368999999999999999999999877
Q ss_pred CCCCCCHHHHHHHHHHHHhh
Q psy9602 200 FFTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 200 y~~~~s~e~iv~yf~~Vaea 219 (239)
|..+ ++..+.+-+..+...
T Consensus 261 ~q~~-dp~~~~~al~~ivh~ 279 (295)
T 3glc_A 261 FQSD-HPVAMMKAVQAVVHH 279 (295)
T ss_dssp HTSS-SHHHHHHHHHHHHHH
T ss_pred hcCc-CHHHHHHHHHHHHhC
Confidence 7777 888888877776543
No 163
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=84.48 E-value=12 Score=30.83 Aligned_cols=76 Identities=12% Similarity=0.077 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|+.. . .+...++.+.+ . ++|++++
T Consensus 18 ~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-~-----~~~~~~~~~~~-~-~iPvV~~ 89 (290)
T 2fn9_A 18 VVLAETAKQRAEQLGYEATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDA-D-----GSIANVKRAKE-A-GIPVFCV 89 (290)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCT-T-----TTHHHHHHHHH-T-TCCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-H-----HHHHHHHHHHH-C-CCeEEEE
Confidence 3444444443332245666655666778888888888889999999986432 1 12223444444 4 7999999
Q ss_pred eCCC
Q psy9602 229 HIPM 232 (239)
Q Consensus 229 N~P~ 232 (239)
|.+.
T Consensus 90 ~~~~ 93 (290)
T 2fn9_A 90 DRGI 93 (290)
T ss_dssp SSCC
T ss_pred ecCC
Confidence 8753
No 164
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=84.47 E-value=2.3 Score=38.50 Aligned_cols=73 Identities=12% Similarity=0.127 Sum_probs=49.6
Q ss_pred CcCC-CHHHH----------HHHHHHHHHHhcCCCceEEE-ecCCC-CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCH
Q psy9602 140 GVSM-TTAER----------KLNLEAWMTEAKTHGFTVMV-QIGGT-CFQEVVELAKHAESLNVHAVLCLPELFFTPASV 206 (239)
Q Consensus 140 ~~sL-T~eER----------~~li~~vve~~~G~rvpVIa-GVg~~-St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~ 206 (239)
...| |.+|. .++++.+.+.. ++||++ +=|+- +.+++.+.. ++|||+|||.--.+-.+ ++
T Consensus 167 l~g~~t~~el~~~a~~~~ad~elI~~Ike~~---~IPVV~IAnGGI~TpedA~~~l----e~GaDGVmVGrAI~~s~-DP 238 (291)
T 3o07_A 167 CQQLKSEDDIAKVAEEMRVPVSLLKDVLEKG---KLPVVNFAAGGVATPADAALLM----QLGCDGVFVGSGIFKSS-NP 238 (291)
T ss_dssp HHTCCCHHHHHHHHHHHTSCHHHHHHHHHHT---SCSSCEEBCSSCCSHHHHHHHH----HTTCSCEEECGGGGGSS-CH
T ss_pred HHcCCCHHHhhhcccccCCCHHHHHHHHHcc---CCCEEEecCCCCCCHHHHHHHH----HhCCCEEEEchHHhCCC-CH
Confidence 4456 77763 25666666653 689874 45555 455554443 67999999998776666 78
Q ss_pred HHHHHHHHHHHhhC
Q psy9602 207 EDLVDYLRDVGEAA 220 (239)
Q Consensus 207 e~iv~yf~~Vaeat 220 (239)
..+...|.......
T Consensus 239 ~~~Akafv~Av~~~ 252 (291)
T 3o07_A 239 VRLATAVVEATTHF 252 (291)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhc
Confidence 88888887777665
No 165
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=84.39 E-value=11 Score=31.13 Aligned_cols=76 Identities=14% Similarity=0.129 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHhcCCCceEE-EecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVM-VQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVI-aGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
...+++-+.+.+...+..++ ......+.....+.++...+.++|++++.|. +.+.....++.+.+ . ++|++
T Consensus 19 ~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~------~~~~~~~~~~~~~~-~-~ipvV 90 (303)
T 3d02_A 19 FNRMGEGVVQAGKEFNLNASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPN------DANVLEPVFKKARD-A-GIVVL 90 (303)
T ss_dssp HHHHHHHHHHHHHHTTEEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCS------CHHHHHHHHHHHHH-T-TCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecC------ChHHHHHHHHHHHH-C-CCeEE
Confidence 34444444444333245665 3556677888888888888899999999863 23444555666655 4 79999
Q ss_pred EEeCC
Q psy9602 227 YYHIP 231 (239)
Q Consensus 227 LYN~P 231 (239)
++|.+
T Consensus 91 ~~~~~ 95 (303)
T 3d02_A 91 TNESP 95 (303)
T ss_dssp EESCT
T ss_pred EEecC
Confidence 99876
No 166
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=84.32 E-value=4.4 Score=33.71 Aligned_cols=59 Identities=3% Similarity=-0.143 Sum_probs=42.1
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 164 FTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 164 vpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
..+++.-+ .+.+...+..+.+.+.++|++++.|... +.....++.+.+ . ++|++++|.+
T Consensus 33 ~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~------~~~~~~~~~~~~-~-~iPvV~~~~~ 91 (306)
T 8abp_A 33 FEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDP------KLGSAIVAKARG-Y-DMKVIAVDDQ 91 (306)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCG------GGHHHHHHHHHH-T-TCEEEEESSC
T ss_pred CEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCc------hhhHHHHHHHHH-C-CCcEEEeCCC
Confidence 45555434 5888889999999999999999997432 233444555555 4 7999999953
No 167
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=84.29 E-value=14 Score=33.40 Aligned_cols=113 Identities=18% Similarity=0.190 Sum_probs=69.2
Q ss_pred hhHHhhhcCCCCEEEecccc---------CCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC----------------
Q psy9602 119 VGITLRMAPIIDQMVNGTTG---------EGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT---------------- 173 (239)
Q Consensus 119 ~~v~~~~~gg~glvV~GstG---------E~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~---------------- 173 (239)
..+..+-.+|.|+++.+.+. -...|..+|...-++.+++.+......+++++.+.
T Consensus 41 ~yy~~rA~gG~Gliite~~~V~~~g~~~~~~~gi~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~ 120 (343)
T 3kru_A 41 VHYATRAIGGVGLIMQEATAVESRGRITDHDLGIWNDEQVKELKKIVDICKANGAVMGIQLAHAGRKCNISYEDVVGPSP 120 (343)
T ss_dssp HHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCTTSCCEESSS
T ss_pred eeeehhhccceeeeeehhhhhhhcCccccccccccCHHHHHHHHHHHHHHhcCCceEeeehhhccCccCcchhhccCCCc
Confidence 34455566888987655431 12456778887777777776644345666654321
Q ss_pred -------------C-------HHHHHHHHHHHHhCCCCEEEEC-----------CCCCCCCC-----CH----HHHHHHH
Q psy9602 174 -------------C-------FQEVVELAKHAESLNVHAVLCL-----------PELFFTPA-----SV----EDLVDYL 213 (239)
Q Consensus 174 -------------S-------t~eAIelar~A~~aGAdaVlV~-----------PP~y~~~~-----s~----e~iv~yf 213 (239)
+ +++-.+-|+.|+++|+|+|-|- .|...+-. +- .-+.+-.
T Consensus 121 i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv 200 (343)
T 3kru_A 121 IKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVI 200 (343)
T ss_dssp CCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHH
T ss_pred CCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHH
Confidence 0 3344556888899999999987 44432220 21 2346666
Q ss_pred HHHHhhCC-CCcEEEEeCC
Q psy9602 214 RDVGEAAP-ATPLFYYHIP 231 (239)
Q Consensus 214 ~~Vaeatp-dLPIiLYN~P 231 (239)
++|.+++| +.||.+=-.|
T Consensus 201 ~aVr~avg~d~pv~vRls~ 219 (343)
T 3kru_A 201 DEVRKNWPENKPIFVRVSA 219 (343)
T ss_dssp HHHHHTSCTTSCEEEEEEC
T ss_pred HHHHhcCCccCCeEEEeec
Confidence 77777775 6799885444
No 168
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=84.20 E-value=2.2 Score=38.46 Aligned_cols=69 Identities=20% Similarity=0.145 Sum_probs=51.2
Q ss_pred HHHHHHHHhcCCCceEE-EecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCC--HHHHHHHHHHHHhhCCCCcEEE
Q psy9602 151 NLEAWMTEAKTHGFTVM-VQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPAS--VEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 151 li~~vve~~~G~rvpVI-aGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s--~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.+...+. . +.+++ +-=--...+++.+.++.+.+.|.|++||- .... + .+.+.+....|.+.+ ++||++
T Consensus 30 ~~~~l~~~-~--~~~~~liDPdK~~~~~~~~~~~~~~~sGtDai~VG-S~~v---t~~~~~~~~~v~~ik~~~-~lPvil 101 (286)
T 3vk5_A 30 VLARLREH-Q--PGPVHIIDPFKVPVTEAVEKAAELTRLGFAAVLLA-STDY---ESFESHMEPYVAAVKAAT-PLPVVL 101 (286)
T ss_dssp HHHHHHHS-C--CEEEEEECTTTSCHHHHHHHHHHHHHTTCSCEEEE-CSCC---SSHHHHHHHHHHHHHHHC-SSCEEE
T ss_pred HHHHHHhc-c--CCceEEECCCCCCcHHHHHHHHHHHhcCCCEEEEc-cCCC---CcchHHHHHHHHHHHHhC-CCCEEE
Confidence 44555555 2 22332 22234568888999999999999999999 4322 6 788999999999988 899999
No 169
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=84.07 E-value=3.9 Score=33.74 Aligned_cols=77 Identities=10% Similarity=0.029 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++.+.+.+...+..+++..+..+.....+..+...+.++|++++.|+.. . .+...++.+.+ . ++|+++
T Consensus 16 ~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~-~-----~~~~~~~~~~~-~-~iPvV~ 87 (271)
T 2dri_A 16 FVSLKDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDS-D-----AVGNAVKMANQ-A-NIPVIT 87 (271)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSST-T-----TTHHHHHHHHH-T-TCCEEE
T ss_pred HHHHHHHHHHHHHHcCcEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-H-----HHHHHHHHHHH-C-CCcEEE
Confidence 34455444444332245666655666777777788888888999999976431 1 12223444544 4 799999
Q ss_pred EeCCC
Q psy9602 228 YHIPM 232 (239)
Q Consensus 228 YN~P~ 232 (239)
+|.+.
T Consensus 88 i~~~~ 92 (271)
T 2dri_A 88 LDRQA 92 (271)
T ss_dssp ESSCC
T ss_pred ecCCC
Confidence 99753
No 170
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.00 E-value=3.4 Score=36.40 Aligned_cols=68 Identities=13% Similarity=0.035 Sum_probs=48.9
Q ss_pred CceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-----------------CHHHHHHHHHHHHhh-CCC
Q psy9602 163 GFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-----------------SVEDLVDYLRDVGEA-APA 222 (239)
Q Consensus 163 rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-----------------s~e~iv~yf~~Vaea-tpd 222 (239)
+..+|. -.+..+.+.+++.++..++.|||.+-+--|+.-+.. +-+.+++..+++.+. + +
T Consensus 17 ~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~-~ 95 (267)
T 3vnd_A 17 KGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHP-D 95 (267)
T ss_dssp CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-T
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-C
Confidence 445544 456778899999999999999999999988732211 223456677777766 5 8
Q ss_pred CcEEE--EeCC
Q psy9602 223 TPLFY--YHIP 231 (239)
Q Consensus 223 LPIiL--YN~P 231 (239)
+||++ |-+|
T Consensus 96 ~Pivlm~Y~np 106 (267)
T 3vnd_A 96 MPIGLLLYANL 106 (267)
T ss_dssp CCEEEEECHHH
T ss_pred CCEEEEecCcH
Confidence 99887 5555
No 171
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=83.95 E-value=4.1 Score=35.07 Aligned_cols=76 Identities=13% Similarity=0.053 Sum_probs=49.2
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHh--CCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAES--LNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~--aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
..+++-+.+.+...++.+++.....+....++.++.+.+ .++|++++.|.. . .....++.+.+ . ++|++
T Consensus 20 ~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~~~---~----~~~~~~~~~~~-~-giPvV 90 (350)
T 3h75_A 20 VSYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQ---Y----VAPQILRLSQG-S-GIKLF 90 (350)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEECCS---S----HHHHHHHHHTT-S-CCEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeCch---h----hHHHHHHHHHh-C-CCcEE
Confidence 334444433332224667666777788888888888888 599999998621 1 12344455544 4 79999
Q ss_pred EEeCCCC
Q psy9602 227 YYHIPMF 233 (239)
Q Consensus 227 LYN~P~~ 233 (239)
++|.+..
T Consensus 91 ~~~~~~~ 97 (350)
T 3h75_A 91 IVNSPLT 97 (350)
T ss_dssp EEESCCC
T ss_pred EEcCCCC
Confidence 9998653
No 172
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=83.86 E-value=5.5 Score=33.44 Aligned_cols=75 Identities=12% Similarity=0.099 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++-+.+.+...+..+++.....+.+...++.+...+.++|++++.|+.. . + ..++.+.+ . ++|+++
T Consensus 42 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~---~---~~~~~l~~-~-~iPvV~ 111 (305)
T 3huu_A 42 NSDVLNGINQACNVRGYSTRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLK--D---D---PIEHLLNE-F-KVPYLI 111 (305)
T ss_dssp HHHHHHHHHHHHHHHTCEEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBT--T---C---HHHHHHHH-T-TCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcC--C---c---HHHHHHHH-c-CCCEEE
Confidence 34444444444332246777777777777778888889999999999987542 1 1 23444444 4 799999
Q ss_pred EeCCC
Q psy9602 228 YHIPM 232 (239)
Q Consensus 228 YN~P~ 232 (239)
.|.+.
T Consensus 112 i~~~~ 116 (305)
T 3huu_A 112 VGKSL 116 (305)
T ss_dssp ESCCC
T ss_pred ECCCC
Confidence 99864
No 173
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=83.77 E-value=6.5 Score=32.80 Aligned_cols=76 Identities=5% Similarity=0.037 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
=..++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|+. . + +.. ++.+.+ . ++|++
T Consensus 30 ~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~---~-~-~~~---~~~l~~-~-~iPvV 99 (289)
T 2fep_A 30 FYSELARGIEDIATMYKYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGN---I-T-DEH---VAEFKR-S-PVPIV 99 (289)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSC---C-C-HHH---HHHHHH-S-SSCEE
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCC---C-C-HHH---HHHHHh-c-CCCEE
Confidence 34445554444433324566666666677777888888888999999998753 2 3 222 344443 4 79999
Q ss_pred EEeCCC
Q psy9602 227 YYHIPM 232 (239)
Q Consensus 227 LYN~P~ 232 (239)
++|.+.
T Consensus 100 ~~~~~~ 105 (289)
T 2fep_A 100 LAASVE 105 (289)
T ss_dssp EESCCC
T ss_pred EEcccc
Confidence 998753
No 174
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=83.76 E-value=8 Score=35.37 Aligned_cols=105 Identities=12% Similarity=0.174 Sum_probs=66.1
Q ss_pred HHhhhcCCCCE---EEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEec--------CCCC-------HHHHHHHH
Q psy9602 121 ITLRMAPIIDQ---MVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQI--------GGTC-------FQEVVELA 182 (239)
Q Consensus 121 v~~~~~gg~gl---vV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGV--------g~~S-------t~eAIela 182 (239)
++..++-|.+. +|+=..-+-..+. +++.+.+..+.+.+....+|+++=+ ...+ .+-.+.-+
T Consensus 116 ve~a~~~GADAVk~lv~~g~d~~~e~~-~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~ 194 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVDGDPQVN-VQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAM 194 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTTSCHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCCchHHHH-HHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHH
Confidence 56666655542 2332222221222 3566666666666554479988722 1222 33377788
Q ss_pred HHH--HhCCCCEEEECCCCCC-----------CCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 183 KHA--ESLNVHAVLCLPELFF-----------TPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 183 r~A--~~aGAdaVlV~PP~y~-----------~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
+.+ .+.|+|.+=+--|.-. -. ++++..++|+++.+++ ++|+++-
T Consensus 195 R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y-~~~ea~~~f~~~~~a~-~~P~v~l 251 (332)
T 3iv3_A 195 KVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVY-SKEEAAQAFREQEAST-DLPYIYL 251 (332)
T ss_dssp HHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCB-CHHHHHHHHHHHHHTC-SSCEEEE
T ss_pred HHHhhcCcCCcEEEEecCCChhhhcccccccccc-cHHHHHHHHHHHHhcC-CCCEEEE
Confidence 888 6779999999876521 11 7799999999999999 7998764
No 175
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=83.71 E-value=3.8 Score=36.01 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=48.0
Q ss_pred ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC-----------------CCHHHHHHHHHHHHhhCCCCcEEE--Ee
Q psy9602 169 QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTP-----------------ASVEDLVDYLRDVGEAAPATPLFY--YH 229 (239)
Q Consensus 169 GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~-----------------~s~e~iv~yf~~VaeatpdLPIiL--YN 229 (239)
-.|..+.+.+++.++..++. +|++.|--|+.-.. .+-+.+++..++|.+.. ++||++ |.
T Consensus 23 ~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~-~~Pii~m~y~ 100 (271)
T 1ujp_A 23 TAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALT-EKPLFLMTYL 100 (271)
T ss_dssp ETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC-CSCEEEECCH
T ss_pred cCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcC-CCCEEEEecC
Confidence 45788999999999999999 99999998874210 13355677888888885 899999 65
Q ss_pred CCC
Q psy9602 230 IPM 232 (239)
Q Consensus 230 ~P~ 232 (239)
+|.
T Consensus 101 n~v 103 (271)
T 1ujp_A 101 NPV 103 (271)
T ss_dssp HHH
T ss_pred cHH
Confidence 563
No 176
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=83.66 E-value=2.7 Score=38.55 Aligned_cols=73 Identities=11% Similarity=-0.008 Sum_probs=50.1
Q ss_pred CHHHHHH----HHHHHHHHhcCCCceEEEecCCC----------CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 144 TTAERKL----NLEAWMTEAKTHGFTVMVQIGGT----------CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 144 T~eER~~----li~~vve~~~G~rvpVIaGVg~~----------St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
|.+-|.+ +++.+.+.++. . ||.+=++.. +.++++++++..+++|+|.+-+..+.. . .
T Consensus 198 slenR~rf~~eiv~aVr~~vg~-~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~--~-~---- 268 (362)
T 4ab4_A 198 SLENRARLLLEVTDAAIEVWGA-Q-RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREA--D-D---- 268 (362)
T ss_dssp SHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCC--T-T----
T ss_pred chhhHHHHHHHHHHHHHHhcCC-C-ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCC--C-H----
Confidence 4566654 55555555654 4 887755543 256899999999999999999987651 1 1
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.+.+.|.+++ ++|||.
T Consensus 269 -~~~~~ik~~~-~iPvi~ 284 (362)
T 4ab4_A 269 -SIGPLIKEAF-GGPYIV 284 (362)
T ss_dssp -CCHHHHHHHH-CSCEEE
T ss_pred -HHHHHHHHHC-CCCEEE
Confidence 3556677777 688875
No 177
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=83.53 E-value=6.9 Score=33.35 Aligned_cols=77 Identities=8% Similarity=-0.102 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCC--CCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLN--VHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aG--AdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
..++++-+.+.+...+..+++.....+.+...+..+...+.+ +|++++.|. +.+.....++.+.+. ++|+
T Consensus 20 ~~~~~~gi~~~a~~~g~~l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~------~~~~~~~~~~~~~~~--~iPv 91 (332)
T 2rjo_A 20 YTAFNKGAQSFAKSVGLPYVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPN------DSADARVIVEACSKA--GAYV 91 (332)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCS------SHHHHHHHHHHHHHH--TCEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCC------CHHHHHHHHHHHHHC--CCeE
Confidence 344444444333221355666556677777788888888888 999999863 234444566666654 7999
Q ss_pred EEEeCCC
Q psy9602 226 FYYHIPM 232 (239)
Q Consensus 226 iLYN~P~ 232 (239)
+++|.+.
T Consensus 92 V~~~~~~ 98 (332)
T 2rjo_A 92 TTIWNKP 98 (332)
T ss_dssp EEESCCC
T ss_pred EEECCCC
Confidence 9998753
No 178
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=83.42 E-value=4.3 Score=37.83 Aligned_cols=73 Identities=12% Similarity=0.033 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCCC-----------------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQIGGTC-----------------FQEVVELAKHAESLNVHAVLCLPELFFTPASVED 208 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGVg~~S-----------------t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~ 208 (239)
+.-.++++.+.+. ++|+-+||.+-| .+-|++.++.+++.|.+-+++.... . +...
T Consensus 120 ~~~~~vv~~ak~~----~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~---S-~v~~ 191 (366)
T 3noy_A 120 EIVREIVEEAKRR----GVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKG---S-DVLQ 191 (366)
T ss_dssp HHHHHHHHHHHHH----TCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC---S-SHHH
T ss_pred hHHHHHHHHHHHc----CCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeec---C-ChHH
Confidence 3334455555443 789999976654 3567788999999999988887543 2 5678
Q ss_pred HHHHHHHHHhhCCCCcEEE
Q psy9602 209 LVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 209 iv~yf~~VaeatpdLPIiL 227 (239)
.+.-|+.+++.+ +.|+-|
T Consensus 192 ~i~ayr~la~~~-dyPLHl 209 (366)
T 3noy_A 192 NVRANLIFAERT-DVPLHI 209 (366)
T ss_dssp HHHHHHHHHHHC-CCCEEE
T ss_pred HHHHHHHHHhcc-CCCEEE
Confidence 899999999997 788754
No 179
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=83.42 E-value=2 Score=36.34 Aligned_cols=58 Identities=14% Similarity=0.187 Sum_probs=33.5
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHH
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYL 213 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf 213 (239)
.++++.+.+.+ ++|||++-|-.+.+++.++. ++|||++++..-.+..+.+.+++.+|+
T Consensus 189 ~~~i~~l~~~~---~ipvia~GGI~~~ed~~~~~----~~Gadgv~vgsal~~~~~~~~~~~~~l 246 (266)
T 2w6r_A 189 TEMIRFVRPLT---TLPIIASGGAGKMEHFLEAF----LAGADAALAASVFHFREIDMRELKEYL 246 (266)
T ss_dssp HHHHHHHGGGC---CSCEEEESCCCSHHHHHHHH----HHTCSEEEESTTTC-------------
T ss_pred HHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHH----HcCCHHHHccHHHHcCCCCHHHHHHHH
Confidence 44666666554 58999987777778777765 369999999987765543444555543
No 180
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=83.41 E-value=2.8 Score=38.48 Aligned_cols=73 Identities=10% Similarity=0.038 Sum_probs=50.7
Q ss_pred CHHHHH----HHHHHHHHHhcCCCceEEEecCCC----------CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH
Q psy9602 144 TTAERK----LNLEAWMTEAKTHGFTVMVQIGGT----------CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL 209 (239)
Q Consensus 144 T~eER~----~li~~vve~~~G~rvpVIaGVg~~----------St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i 209 (239)
|.+-|. ++++.+.+.++. . ||.+=++.. +.++++++++..+++|+|.+-+..+.+ . .
T Consensus 206 slenR~rf~~evv~aVr~~vg~-~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~-~--~---- 276 (361)
T 3gka_A 206 SIENRARLLLEVVDAAIDVWSA-A-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFG-G--D---- 276 (361)
T ss_dssp SHHHHSHHHHHHHHHHHHHHCG-G-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS-T--T----
T ss_pred ChhhcHHHHHHHHHHHHHHcCC-C-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC-C--H----
Confidence 456664 555666666654 4 887755542 257899999999999999999987652 1 1
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.+.+.|.+.+ ++|||.
T Consensus 277 -~~~~~ik~~~-~iPvi~ 292 (361)
T 3gka_A 277 -AIGQQLKAAF-GGPFIV 292 (361)
T ss_dssp -CCHHHHHHHH-CSCEEE
T ss_pred -HHHHHHHHHc-CCCEEE
Confidence 3556677777 688875
No 181
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=83.23 E-value=2.5 Score=38.27 Aligned_cols=66 Identities=8% Similarity=0.051 Sum_probs=47.6
Q ss_pred CceEEEecCCCCHHHHHHHHHHH-HhCCCCEEEECCCCC-CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHA-ESLNVHAVLCLPELF-FTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A-~~aGAdaVlV~PP~y-~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
|.--++.+.-...+.+++.++.+ .+.|+.++.+.+++. ... +++.+...|+.+.+. ++||+++--+
T Consensus 128 Rf~g~a~v~~~~~~~a~~El~r~~~~~G~~Gv~l~~~~~~~~~-~d~~~~p~~~~~~e~--g~pV~iH~g~ 195 (357)
T 3nur_A 128 RFVGFATLPINEPEAAAREFERCINDLGFKGALIMGRAQDGFL-DQDKYDIIFKTAENL--DVPIYLHPAP 195 (357)
T ss_dssp TEEECBCCCTTSHHHHHHHHHHHHHTTCCCCEEEESCBTTBCT-TSGGGHHHHHHHHHH--TCCEEEECCC
T ss_pred EEEEEEeCCCCCHHHHHHHHHHHHhhcCceEEEeCCCCCCCCC-CCccHHHHHHHHHhc--CCeEEEecCC
Confidence 43333344444567899999987 579999999986442 223 678899999998886 8999998543
No 182
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=83.10 E-value=4 Score=32.59 Aligned_cols=77 Identities=13% Similarity=0.175 Sum_probs=52.6
Q ss_pred CCC-EEEec--cccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Q psy9602 128 IID-QMVNG--TTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA 204 (239)
Q Consensus 128 g~g-lvV~G--stGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~ 204 (239)
+.+ +++.| .+|.+..+. .+.++.+.... ++|+|+.-+..+.++..+.. +.|+|++++....|..+.
T Consensus 143 ~~~~vli~~~~~~g~~~g~~----~~~i~~~~~~~---~~Pvia~~g~~~~~~~~~~~----~~G~~~~~vg~a~~~~~~ 211 (237)
T 3cwo_X 143 GAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT---TLPIIASGGAGKMEHFLEAF----LAGADAALAASVFHFREI 211 (237)
T ss_dssp TCSEEEEEETTTTTCCSCCC----HHHHHHHGGGC---CSCEEEESCCCSHHHHHHHH----HHTCSEEEESHHHHTTSS
T ss_pred CCCeEEEEecCCCCcccccc----HHHHHHHHHhc---CCCEEecCCCCCHHHHHHHH----HcCcHHHhhhHHHHcCCC
Confidence 344 66666 556655554 44555555443 57999887777777766654 469999999987766665
Q ss_pred CHHHHHHHHHH
Q psy9602 205 SVEDLVDYLRD 215 (239)
Q Consensus 205 s~e~iv~yf~~ 215 (239)
+.+++.++++.
T Consensus 212 ~~~~~~~~l~~ 222 (237)
T 3cwo_X 212 DVRELKEYLKK 222 (237)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 78888877653
No 183
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=82.70 E-value=8.8 Score=31.54 Aligned_cols=75 Identities=15% Similarity=0.149 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.+... + +.+.+.+ .+.. ++|++++
T Consensus 23 ~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~----~-~~~~~~l---~~~~-~iPvV~~ 93 (289)
T 1dbq_A 23 AEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEY----P-EPLLAML---EEYR-HIPMVVM 93 (289)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSCC----C-HHHHHHH---HHTT-TSCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEeccC----C-HHHHHHH---Hhcc-CCCEEEE
Confidence 3444444333322135666666667788888888888889999999987432 2 3344433 3334 7999999
Q ss_pred eCCC
Q psy9602 229 HIPM 232 (239)
Q Consensus 229 N~P~ 232 (239)
|.+.
T Consensus 94 ~~~~ 97 (289)
T 1dbq_A 94 DWGE 97 (289)
T ss_dssp ECSS
T ss_pred ccCC
Confidence 8753
No 184
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=82.70 E-value=3.1 Score=33.94 Aligned_cols=87 Identities=13% Similarity=0.001 Sum_probs=50.2
Q ss_pred hcCCCC-EEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC---
Q psy9602 125 MAPIID-QMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF--- 200 (239)
Q Consensus 125 ~~gg~g-lvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y--- 200 (239)
.+.|.+ +++.+..+ .+.-.++++.+.+. .+++++.+.... +..+.++.+.+.|+|.+.+.|-+-
T Consensus 74 ~~~Gad~v~v~~~~~------~~~~~~~~~~~~~~----g~~~~v~~~~~~--t~~~~~~~~~~~g~d~i~v~~g~~g~~ 141 (211)
T 3f4w_A 74 FDAGADYVTVLGVTD------VLTIQSCIRAAKEA----GKQVVVDMICVD--DLPARVRLLEEAGADMLAVHTGTDQQA 141 (211)
T ss_dssp HHTTCSEEEEETTSC------HHHHHHHHHHHHHH----TCEEEEECTTCS--SHHHHHHHHHHHTCCEEEEECCHHHHH
T ss_pred HhcCCCEEEEeCCCC------hhHHHHHHHHHHHc----CCeEEEEecCCC--CHHHHHHHHHHcCCCEEEEcCCCcccc
Confidence 455555 44543332 23335666666554 357766543332 246778889999999987753211
Q ss_pred CCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 201 FTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 201 ~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.+ ...++++.+.+..|++||++
T Consensus 142 ~~~----~~~~~i~~l~~~~~~~~i~~ 164 (211)
T 3f4w_A 142 AGR----KPIDDLITMLKVRRKARIAV 164 (211)
T ss_dssp TTC----CSHHHHHHHHHHCSSCEEEE
T ss_pred cCC----CCHHHHHHHHHHcCCCcEEE
Confidence 111 13567777877765788865
No 185
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=82.69 E-value=11 Score=35.56 Aligned_cols=63 Identities=16% Similarity=-0.005 Sum_probs=40.6
Q ss_pred HhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 122 TLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 122 ~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
...++.+..++++. ..|. .+...++++.+.+... .+||++|-.. + .+.++.+.++|||++.+.
T Consensus 235 ~~l~~aG~d~I~id~a~g~-----~~~~~~~v~~i~~~~p--~~~Vi~g~v~-t----~e~a~~l~~aGaD~I~vg 298 (490)
T 4avf_A 235 AALVAAGVDVVVVDTAHGH-----SKGVIERVRWVKQTFP--DVQVIGGNIA-T----AEAAKALAEAGADAVKVG 298 (490)
T ss_dssp HHHHHTTCSEEEEECSCCS-----BHHHHHHHHHHHHHCT--TSEEEEEEEC-S----HHHHHHHHHTTCSEEEEC
T ss_pred HHHhhcccceEEecccCCc-----chhHHHHHHHHHHHCC--CceEEEeeeC-c----HHHHHHHHHcCCCEEEEC
Confidence 33456667665443 3332 2455567777777663 5899997322 2 356788999999999983
No 186
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=82.64 E-value=6.8 Score=33.48 Aligned_cols=76 Identities=17% Similarity=0.208 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++-+.+.+...+..+++..+..+.+...+..+...+.++|++++.|+. . +.+. +..++... ++|+++
T Consensus 78 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~---~-~~~~----~~~~~~~~-~iPvV~ 148 (338)
T 3dbi_A 78 FSELLFHAARMAEEKGRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRF---L-SVDE----IDDIIDAH-SQPIMV 148 (338)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSS---S-CHHH----HHHHHHHC-SSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCC---C-ChHH----HHHHHHcC-CCCEEE
Confidence 3444444444443335677777777788888888898899999999998743 2 3333 33445556 799999
Q ss_pred EeCCC
Q psy9602 228 YHIPM 232 (239)
Q Consensus 228 YN~P~ 232 (239)
.|.+.
T Consensus 149 ~~~~~ 153 (338)
T 3dbi_A 149 LNRRL 153 (338)
T ss_dssp ESSCC
T ss_pred EcCCC
Confidence 98753
No 187
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=82.59 E-value=9.8 Score=32.53 Aligned_cols=109 Identities=15% Similarity=-0.003 Sum_probs=70.8
Q ss_pred HHhhHHhhhcCCCC-EEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q psy9602 117 LLVGITLRMAPIID-QMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLC 195 (239)
Q Consensus 117 l~~~v~~~~~gg~g-lvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV 195 (239)
....++..++.|.+ +-+.=..|..-+=..++-.+-+..+++.+.+..+|||+-.+-.+.++....++.|.++|||.|=.
T Consensus 73 k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKT 152 (220)
T 1ub3_A 73 KALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKT 152 (220)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEe
Confidence 33456667777764 31222233222224466677777777777543589999888888999999999999999999988
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 196 LPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 196 ~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
..-|.....+.+++..+-+.+ .. .+||..-
T Consensus 153 sTGf~~~gat~~dv~~m~~~v--g~-~v~Vkaa 182 (220)
T 1ub3_A 153 STGFGPRGASLEDVALLVRVA--QG-RAQVKAA 182 (220)
T ss_dssp CCSSSSCCCCHHHHHHHHHHH--TT-SSEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHhh--CC-CCeEEEE
Confidence 754432222677776665555 33 5777653
No 188
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=82.26 E-value=5.6 Score=34.11 Aligned_cols=95 Identities=12% Similarity=0.034 Sum_probs=62.1
Q ss_pred EEEeccccCCc--CCCHHHHHHHHHHHHHHh-------------------cCCCceEEEecC--CCCHHHHHHHHHHHHh
Q psy9602 131 QMVNGTTGEGV--SMTTAERKLNLEAWMTEA-------------------KTHGFTVMVQIG--GTCFQEVVELAKHAES 187 (239)
Q Consensus 131 lvV~GstGE~~--sLT~eER~~li~~vve~~-------------------~G~rvpVIaGVg--~~St~eAIelar~A~~ 187 (239)
++.+-+..|+- .++.++|.++++.+++.. .+ .+.||+.-- ..+.++.+++.+.+++
T Consensus 61 I~T~R~~~eGG~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~~~~i~~~~~-~~kvI~S~Hdf~~tp~el~~~~~~~~~ 139 (231)
T 2ocz_A 61 IFTLRTVQEGGNITLSSQEYVDIIKEINAIYNPDYIDFEYFTHKSVFQEMLD-FPNLILSYHNFEETPENLMEAFSEMTK 139 (231)
T ss_dssp EEECCBGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEEETTTTGGGGGGGTT-CSSEEEEEEESSCCCTTHHHHHHHHHH
T ss_pred EEEEeecccCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCCHHHHHHhhc-CCeEEEEecCCCCCHHHHHHHHHHHHH
Confidence 44444444432 489999999999998763 22 256776442 1223789999999999
Q ss_pred CCCCEEEECCCCCCCCCCHHHHHHHHHHHH---hhCCCCcEEEEeC
Q psy9602 188 LNVHAVLCLPELFFTPASVEDLVDYLRDVG---EAAPATPLFYYHI 230 (239)
Q Consensus 188 aGAdaVlV~PP~y~~~~s~e~iv~yf~~Va---eatpdLPIiLYN~ 230 (239)
.|||-+=+.... . +.++..+-++... ...++.|++.|+.
T Consensus 140 ~gaDivKia~~a---~-~~~D~l~ll~~~~~~~~~~~~~P~I~~~M 181 (231)
T 2ocz_A 140 LAPRVVKIAVMP---Q-SEQDVLDLMNYTRGFKTLNPEQEFATISM 181 (231)
T ss_dssp TCCSEEEEEECC---S-SHHHHHHHHHHHHHHHHHCTTCEEEEEEC
T ss_pred cCCCEEEEEeec---C-CHHHHHHHHHHHHHHhhccCCCCEEEEEc
Confidence 999988666432 2 5555555554443 2234789999986
No 189
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=82.18 E-value=2.6 Score=37.32 Aligned_cols=80 Identities=14% Similarity=0.118 Sum_probs=47.5
Q ss_pred EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC---C-C---
Q psy9602 133 VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTP---A-S--- 205 (239)
Q Consensus 133 V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~---~-s--- 205 (239)
..|+||.-..++ ++-.++++.+.+.+ ++||++|.|=.+.+++ +.+.+.|||+++|-.-..-.. . +
T Consensus 182 ~~GvTG~~~~~~-~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~~----~~~~~~gADgvIVGSAiv~~i~~~~~~~~~ 253 (271)
T 3nav_A 182 RAGVTGAETKAN-MPVHALLERLQQFD---APPALLGFGISEPAQV----KQAIEAGAAGAISGSAVVKIIETHLDNPAK 253 (271)
T ss_dssp CC--------CC-HHHHHHHHHHHHTT---CCCEEECSSCCSHHHH----HHHHHTTCSEEEESHHHHHHHHHTTTCHHH
T ss_pred ccCCCCcccCCc-hhHHHHHHHHHHhc---CCCEEEECCCCCHHHH----HHHHHcCCCEEEECHHHHHHHHhhccchHH
Confidence 468999987776 45677888887765 4799999988776655 445668999999975332100 0 1
Q ss_pred -HHHHHHHHHHHHhhC
Q psy9602 206 -VEDLVDYLRDVGEAA 220 (239)
Q Consensus 206 -~e~iv~yf~~Vaeat 220 (239)
.+.+.+|.+.+..++
T Consensus 254 ~~~~~~~~~~~l~~~~ 269 (271)
T 3nav_A 254 QLTELANFTQAMKKAT 269 (271)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 245667777776654
No 190
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=82.08 E-value=15 Score=31.36 Aligned_cols=71 Identities=10% Similarity=-0.075 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|+. . ++ . .++.+.+ . ++|++++
T Consensus 84 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~---~-~~-~---~~~~l~~-~-~iPvV~i 153 (344)
T 3kjx_A 84 PEVLTGINQVLEDTELQPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLE---H-SE-A---ARAMLDA-A-GIPVVEI 153 (344)
T ss_dssp HHHHHHHHHHHTSSSSEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSC---C-CH-H---HHHHHHH-C-SSCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCC---C-CH-H---HHHHHHh-C-CCCEEEE
Confidence 455555555555445778887787888888888888899999999998643 2 22 2 3344444 4 7999999
Q ss_pred e
Q psy9602 229 H 229 (239)
Q Consensus 229 N 229 (239)
+
T Consensus 154 ~ 154 (344)
T 3kjx_A 154 M 154 (344)
T ss_dssp E
T ss_pred e
Confidence 4
No 191
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=82.04 E-value=3.3 Score=37.61 Aligned_cols=81 Identities=10% Similarity=0.059 Sum_probs=53.1
Q ss_pred CHHHHHH----HHHHHHHHhcCCCceEEEecC-------CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC---CCHHHH
Q psy9602 144 TTAERKL----NLEAWMTEAKTHGFTVMVQIG-------GTCFQEVVELAKHAESLNVHAVLCLPELFFTP---ASVEDL 209 (239)
Q Consensus 144 T~eER~~----li~~vve~~~G~rvpVIaGVg-------~~St~eAIelar~A~~aGAdaVlV~PP~y~~~---~s~e~i 209 (239)
|.+.|.+ +++.+.+.++. ++||.+=++ +.+.++++++++..+++ +|.+-+....+... ..+..-
T Consensus 188 slenR~rf~~eiv~aVr~avg~-d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~ 265 (343)
T 3kru_A 188 SIENRARFLIEVIDEVRKNWPE-NKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQ 265 (343)
T ss_dssp SHHHHTHHHHHHHHHHHHTSCT-TSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTT
T ss_pred chHhHHHHHHHHHHHHHhcCCc-cCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCcee
Confidence 5666754 55555555554 678887444 34689999999999999 99999953222110 011223
Q ss_pred HHHHHHHHhhCCCCcEEE
Q psy9602 210 VDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 210 v~yf~~VaeatpdLPIiL 227 (239)
.++.+.|.+++ ++||+.
T Consensus 266 ~~~~~~ir~~~-~iPVi~ 282 (343)
T 3kru_A 266 VKYAETIKKRC-NIKTSA 282 (343)
T ss_dssp HHHHHHHHHHH-TCEEEE
T ss_pred ehHHHHHHHhc-Ccccce
Confidence 56677788888 799886
No 192
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=81.99 E-value=13 Score=31.69 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=43.4
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+..+++.....+.+...++.+...+.++|++++.|+.. ++ ..++.+.+ . ++|+++++.+
T Consensus 92 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~----~~----~~~~~l~~-~-~iPvV~~~~~ 150 (339)
T 3h5o_A 92 GYQMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSH----AE----PFERILSQ-H-ALPVVYMMDL 150 (339)
T ss_dssp TCEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCC----CT----THHHHHHH-T-TCCEEEEESC
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCC----CH----HHHHHHhc-C-CCCEEEEeec
Confidence 46777777888888888999999999999999987542 11 12333433 4 7999999764
No 193
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=81.82 E-value=8.5 Score=31.86 Aligned_cols=72 Identities=13% Similarity=0.073 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHhcCCCce-EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 145 TAERKLNLEAWMTEAKTHGFT-VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvp-VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
..=..++++-+.+.+...+.. +++.....+.....+..+...+.++|++++.|+... .+ ... ++
T Consensus 22 ~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~-------------~~-~~~-~i 86 (277)
T 3hs3_A 22 NRFYAQIIDGIQEVIQKEGYTALISFSTNSDVKKYQNAIINFENNNVDGIITSAFTIP-------------PN-FHL-NT 86 (277)
T ss_dssp SHHHHHHHHHHHHHHHHTTCEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCCCC-------------TT-CCC-SS
T ss_pred ChhHHHHHHHHHHHHHHCCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcchHHH-------------HH-HhC-CC
Confidence 344455555555554433567 777778888888889999999999999999983221 12 344 79
Q ss_pred cEEEEeCC
Q psy9602 224 PLFYYHIP 231 (239)
Q Consensus 224 PIiLYN~P 231 (239)
|++++|.+
T Consensus 87 PvV~~~~~ 94 (277)
T 3hs3_A 87 PLVMYDSA 94 (277)
T ss_dssp CEEEESCC
T ss_pred CEEEEccc
Confidence 99999976
No 194
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=81.81 E-value=8.5 Score=31.72 Aligned_cols=55 Identities=11% Similarity=0.167 Sum_probs=41.1
Q ss_pred cCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 170 IGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 170 Vg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
....+.+...+..+.+.+.++|++++.|+.. +....+++.+.+. ++|++++|.+.
T Consensus 50 ~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~------~~~~~~~~~~~~~--~iPvV~~~~~~ 104 (304)
T 3gbv_A 50 YDPYDYNSFVATSQAVIEEQPDGVMFAPTVP------QYTKGFTDALNEL--GIPYIYIDSQI 104 (304)
T ss_dssp ECSSCHHHHHHHHHHHHTTCCSEEEECCSSG------GGTHHHHHHHHHH--TCCEEEESSCC
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEECCCCh------HHHHHHHHHHHHC--CCeEEEEeCCC
Confidence 3456788888899999999999999997532 2234456666665 79999999754
No 195
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=81.74 E-value=7.5 Score=37.50 Aligned_cols=105 Identities=10% Similarity=-0.029 Sum_probs=64.2
Q ss_pred HHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC
Q psy9602 116 MLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 116 ~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA 190 (239)
.++.-+.....||.+++=.= .-+.-.++..+||...+..+++ .++. +.-..++|++.+.++.++.+++|.++|+
T Consensus 193 ~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe-~k~~~~NiTa~~~~eM~~Ra~~a~e~G~ 271 (493)
T 1bwv_A 193 NYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFTMEAVNKASAATGE-VKGHYLNVTAATMEEMYARANFAKELGS 271 (493)
T ss_dssp HHHHHHHHHHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHTS-CCEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCcccCccccCCCCCCcHHHHHHHHHHHHHHHHHhhCC-cceeeccCCCCCHHHHHHHHHHHHHhCC
Confidence 33333333445555554211 1234556788999865444433 4544 4556679999999999999999999999
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 191 HAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 191 daVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++|+-+-. .. + .+...+..++.. ++||.++
T Consensus 272 ~~~mvd~~~--G~-~---a~~~l~~~~r~~-~l~lh~H 302 (493)
T 1bwv_A 272 VIIMIDLVI--GY-T---AIQTMAKWARDN-DMILHLH 302 (493)
T ss_dssp SEEEEEGGG--CH-H---HHHHHHHHHHHT-TCEEEEE
T ss_pred CeEEEeccc--Ch-H---HHHHHHHHHhhc-CcEEEec
Confidence 999987422 22 1 222223333345 7887766
No 196
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=81.74 E-value=5.1 Score=35.69 Aligned_cols=78 Identities=5% Similarity=0.018 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCCC------------------------------HHHHHHHHHHHHhCCCCEEEE
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQIGGTC------------------------------FQEVVELAKHAESLNVHAVLC 195 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGVg~~S------------------------------t~eAIelar~A~~aGAdaVlV 195 (239)
....+.++.+.+..++ ++|+|..+++.= ++..+++++...++|||++++
T Consensus 131 ~~v~eai~~l~~~l~~-~~pligf~g~P~Tla~~l~~~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i 209 (348)
T 4ay7_A 131 PVVLEAIKIIREKVGP-DVPIVGGMEGPVTVASDLVSVKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAI 209 (348)
T ss_dssp HHHHHHHHHHHHHHCT-TSCEEEEEECHHHHHHHHHCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHhCC-CeeEEEeccchHHHHHhcccchHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCccee
Confidence 3456667777777877 889887776531 344556777778899999999
Q ss_pred CCCCCCCC-CCHHHH----HHHHHHHHhhCCCCc
Q psy9602 196 LPELFFTP-ASVEDL----VDYLRDVGEAAPATP 224 (239)
Q Consensus 196 ~PP~y~~~-~s~e~i----v~yf~~VaeatpdLP 224 (239)
..+..... .+++.. ..|++.|.++..+.|
T Consensus 210 ~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~ 243 (348)
T 4ay7_A 210 ADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVT 243 (348)
T ss_dssp ECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred eccccccccCCHHHHHHHhhHHHHHHHhhccCCc
Confidence 98764321 265654 456889999984434
No 197
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=81.48 E-value=11 Score=34.76 Aligned_cols=109 Identities=9% Similarity=-0.023 Sum_probs=62.9
Q ss_pred cceEEEeehhhHHHHHHHHhhHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHH
Q psy9602 100 AKWTIIITAGLLLLTCMLLVGITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVV 179 (239)
Q Consensus 100 ~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAI 179 (239)
...-++.-|+..-....|+..+ ...| ++.++.. .+|.||..+.++. ++ ..+.+.++. ..+..
T Consensus 41 l~~Pii~ApM~~vte~~lA~A~--a~~G--g~gvi~~-----~~s~ee~~~~i~~----~~---~~~~~~~g~--~~~~~ 102 (361)
T 3r2g_A 41 LNLPVISANMDTITESNMANFM--HSKG--AMGALHR-----FMTIEENIQEFKK----CK---GPVFVSVGC--TENEL 102 (361)
T ss_dssp ESSCEEECCSTTTCSHHHHHHH--HHTT--CEEBCCS-----CSCHHHHHHHHHT----CC---SCCBEEECS--SHHHH
T ss_pred cCCCEEECCCCCchHHHHHHHH--HHcC--CCEEEeC-----CCCHHHHHHHHhh----cc---eEEEEEcCC--CHHHH
Confidence 3444555555333334443331 1223 3444442 2788887765432 22 223333332 36788
Q ss_pred HHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 180 ELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 180 elar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
++++.+.++|+|.+.+-.++.+ .+.+.+..+.|.+..|++||+.=|.
T Consensus 103 e~~~~a~~aGvdvI~id~a~G~----~~~~~e~I~~ir~~~~~~~Vi~G~V 149 (361)
T 3r2g_A 103 QRAEALRDAGADFFCVDVAHAH----AKYVGKTLKSLRQLLGSRCIMAGNV 149 (361)
T ss_dssp HHHHHHHHTTCCEEEEECSCCS----SHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEeCCCCC----cHhHHHHHHHHHHhcCCCeEEEcCc
Confidence 9999999999998887555532 2456667777777767899998554
No 198
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=81.47 E-value=12 Score=31.22 Aligned_cols=62 Identities=18% Similarity=0.296 Sum_probs=42.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++..+..+.....+..+...+.++|++++.|..... . +.. ++.+.+ . ++|++++|.+.
T Consensus 32 g~~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~--~-~~~---~~~~~~-~-~iPvV~~~~~~ 93 (306)
T 2vk2_A 32 GITLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATG--W-EPV---LKEAKD-A-EIPVFLLDRSI 93 (306)
T ss_dssp TCEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSS--C-HHH---HHHHHH-T-TCCEEEESSCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhh--H-HHH---HHHHHH-C-CCCEEEecCCC
Confidence 3566666666777877888888888899999998744211 1 223 344444 4 79999998753
No 199
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=81.31 E-value=4 Score=34.98 Aligned_cols=76 Identities=16% Similarity=0.035 Sum_probs=51.5
Q ss_pred HHHHHHHhcCCCceEEEecCC----CCHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCCHHHHHHHHHHHHhhCCC--Cc
Q psy9602 152 LEAWMTEAKTHGFTVMVQIGG----TCFQEVVELAKHAESLNVHAVLCLPELFF-TPASVEDLVDYLRDVGEAAPA--TP 224 (239)
Q Consensus 152 i~~vve~~~G~rvpVIaGVg~----~St~eAIelar~A~~aGAdaVlV~PP~y~-~~~s~e~iv~yf~~Vaeatpd--LP 224 (239)
++.+.+...+.+++|...++. .+++.-+..++.|.+.|||.|-+..++.. +..+.+.+.+-..+|.+++++ +|
T Consensus 43 v~~~~~~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lk 122 (220)
T 1ub3_A 43 VAWVRARYPHAPFRLVTVVGFPLGYQEKEVKALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLK 122 (220)
T ss_dssp HHHHHHHCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEE
T ss_pred HHHHHHHhCCCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCce
Confidence 344444444434665544433 67888888999999999999988776643 112788899999999998732 45
Q ss_pred EEE
Q psy9602 225 LFY 227 (239)
Q Consensus 225 IiL 227 (239)
+||
T Consensus 123 vIl 125 (220)
T 1ub3_A 123 VIL 125 (220)
T ss_dssp EEC
T ss_pred EEE
Confidence 444
No 200
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=81.21 E-value=3.5 Score=35.76 Aligned_cols=62 Identities=26% Similarity=0.229 Sum_probs=46.2
Q ss_pred CceEEEecCCCCH-------HHHHHHHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCF-------QEVVELAKHAESLNVHAVLCLP-ELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St-------~eAIelar~A~~aGAdaVlV~P-P~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+.+||+-+-..|. .+..++++.+++.||+++.+.. +.||.. + .++++.+.+++ ++||+.-++
T Consensus 45 ~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvlt~~~~f~G-~----~~~l~~i~~~v-~lPvl~kdf 114 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVLTEPHRFGG-S----LLDLKRVREAV-DLPLLRKDF 114 (254)
T ss_dssp SCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEECCCSSSCC-C----HHHHHHHHHHC-CSCEEEESC
T ss_pred CCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEecchhhhcc-C----HHHHHHHHHhc-CCCEEECCc
Confidence 3678886652222 3568999999999999999964 666665 3 34778888898 899987664
No 201
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=81.11 E-value=17 Score=32.64 Aligned_cols=97 Identities=12% Similarity=0.081 Sum_probs=67.4
Q ss_pred CCCCEEEec------cccC--CcCCCHHHHHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 127 PIIDQMVNG------TTGE--GVSMTTAERKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 127 gg~glvV~G------stGE--~~sLT~eER~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
|...+++.| +.|- ...+|.+|....++.++..+ ++||++=. |..+..++.+.++..+++||++|-+-
T Consensus 42 Gf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~---~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iE 118 (298)
T 3eoo_A 42 GFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT---NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLE 118 (298)
T ss_dssp TCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC---CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc---CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEC
Confidence 445566655 2232 23579999999999998876 57999932 22378899999999999999999875
Q ss_pred CCCC--------CCCC-CHHHHHHHHHHHHhhCCCCcEE
Q psy9602 197 PELF--------FTPA-SVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 197 PP~y--------~~~~-s~e~iv~yf~~VaeatpdLPIi 226 (239)
--.+ -+.. +.++.++..++..++..+.+++
T Consensus 119 Dq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~ 157 (298)
T 3eoo_A 119 DQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFV 157 (298)
T ss_dssp CBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSE
T ss_pred CCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeE
Confidence 4221 1112 7888888888887775233433
No 202
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=80.98 E-value=6.2 Score=38.77 Aligned_cols=112 Identities=13% Similarity=0.025 Sum_probs=68.3
Q ss_pred hHHhhhcCCCCEEEeccc-----cCC-----cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC----------------
Q psy9602 120 GITLRMAPIIDQMVNGTT-----GEG-----VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT---------------- 173 (239)
Q Consensus 120 ~v~~~~~gg~glvV~Gst-----GE~-----~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~---------------- 173 (239)
.+..+-.+|.|+++.+.+ |-. ..|..++..+-++.+.+.+.....++++++.+.
T Consensus 44 ~y~~ra~gG~Gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~p 123 (729)
T 1o94_A 44 HRSVKAEGGWAALNTEYCSINPESDDTHRLSARIWDEGDVRNLKAMTDEVHKYGALAGVELWYGGAHAPNMESRATPRGP 123 (729)
T ss_dssp HHHHHHHTTCSEEEEEEEESSTTSCCTTSCCEECSSHHHHHHHHHHHHHHHTTTCEEEEEEECCGGGSCCTTTCCCCEES
T ss_pred HHHHHhcCCCCEEEEcceEecCcccCCCCCCCccCChHHhHHHHHHHHHHHhCCCeEEEEecCCCccccccccCCCCcCC
Confidence 344555788888765544 211 245557766666666665544357888888662
Q ss_pred -----------------------CHHHHHHHHHHHHhCCCCEEEECCCC-----------CCCCC-----CH----HHHH
Q psy9602 174 -----------------------CFQEVVELAKHAESLNVHAVLCLPEL-----------FFTPA-----SV----EDLV 210 (239)
Q Consensus 174 -----------------------St~eAIelar~A~~aGAdaVlV~PP~-----------y~~~~-----s~----e~iv 210 (239)
..++-.+-|+.|+++|+|+|-+.-.+ ..+-. +- .-+.
T Consensus 124 s~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~ 203 (729)
T 1o94_A 124 SQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWL 203 (729)
T ss_dssp SCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHH
T ss_pred CcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHH
Confidence 03566678889999999999997644 22110 11 2355
Q ss_pred HHHHHHHhhCC-CCcEEEEeCC
Q psy9602 211 DYLRDVGEAAP-ATPLFYYHIP 231 (239)
Q Consensus 211 ~yf~~Vaeatp-dLPIiLYN~P 231 (239)
+-.++|.++++ +.||.+==.|
T Consensus 204 eiv~avr~~vg~~~pv~vrls~ 225 (729)
T 1o94_A 204 ETLEKVKHAVGSDCAIATRFGV 225 (729)
T ss_dssp HHHHHHHHHHTTTSEEEEEEEE
T ss_pred HHHHHHHHHhCCCceEEEEEcc
Confidence 56666666664 6788774433
No 203
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=80.59 E-value=12 Score=31.15 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++-+.+.+...+..+++.....+.....+..+...+.++|++++.|+.. +.+. .++.+.+ . ++|+++
T Consensus 35 ~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~----~~~~---~~~~~~~-~-~iPvV~ 105 (293)
T 2iks_A 35 YTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLP----PEHP---FYQRWAN-D-PFPIVA 105 (293)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSC----TTCH---HHHTTTT-S-SSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCC----CcHH---HHHHHHh-C-CCCEEE
Confidence 34455554444433245666666666777778888888888999999987532 1122 2333433 4 799999
Q ss_pred EeCC
Q psy9602 228 YHIP 231 (239)
Q Consensus 228 YN~P 231 (239)
+|.+
T Consensus 106 ~~~~ 109 (293)
T 2iks_A 106 LDRA 109 (293)
T ss_dssp EESC
T ss_pred ECCc
Confidence 9875
No 204
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=80.59 E-value=3.1 Score=37.41 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=56.6
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC--------CHHHHHHHHHHHHhCCCCEEEECC-----CCCCCCCCHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT--------CFQEVVELAKHAESLNVHAVLCLP-----ELFFTPASVE 207 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~--------St~eAIelar~A~~aGAdaVlV~P-----P~y~~~~s~e 207 (239)
..|+.++|.++|+.+.+ ...|+.-+|.. ++.+-|++++...++||+.||+-. --.|.. ..+
T Consensus 134 i~l~~~~~~~lI~~a~~-----~f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ViiEaRESG~~Gi~~~-~g~ 207 (276)
T 1u83_A 134 LPMTNKEKAAYIADFSD-----EFLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEKVITEARESGTGGICSS-SGD 207 (276)
T ss_dssp SCCCHHHHHHHHHHHTT-----TSEEEEECSCCC------CCSTHHHHHHHHHHHHTEEEEEEC----------------
T ss_pred ccCCHHHHHHHHHHHHh-----hcEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcEEEEeeeccCCCCccCC-CCC
Confidence 45999999999996554 35677766654 448999999999999999999986 212222 222
Q ss_pred HHHHHH-HHHHhhCCCCcEEEEeCCC
Q psy9602 208 DLVDYL-RDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 208 ~iv~yf-~~VaeatpdLPIiLYN~P~ 232 (239)
--.+-. ..|.+.. ++.-++|..|.
T Consensus 208 ~r~d~v~~~i~~~l-~~eklifEAp~ 232 (276)
T 1u83_A 208 VRFQIVDDIISSDI-DINRLIFEAPN 232 (276)
T ss_dssp ---CCHHHHHTTTS-CGGGEEEECCS
T ss_pred CcHHHHHHHHHhhC-ChhhEEEECCC
Confidence 222445 6667777 67778888875
No 205
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=80.53 E-value=15 Score=34.31 Aligned_cols=138 Identities=13% Similarity=0.134 Sum_probs=94.8
Q ss_pred hhhhhcc--cccccc-ccCCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEE-EeccccCCcCCCHHHHHHHH
Q psy9602 77 RRKRLRN--AHGEVV-MIDPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQM-VNGTTGEGVSMTTAERKLNL 152 (239)
Q Consensus 77 ~~~~~~~--~~p~~~-~iD~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glv-V~GstGE~~sLT~eER~~li 152 (239)
-|...+- |.++-. ..|| .....++|-- ++-|-.- ..+-|-|+- .+-+.--+.-|....-++||
T Consensus 34 sR~ayaAAHVVaDP~ad~~P-~~~aaiDWda-----TLafR~~-------Lws~GLGVAEAMDTAQRGMGLDW~~a~ELI 100 (396)
T 4dnh_A 34 SRVAFAAAHVVADPLADNDP-WLAPAIDWER-----TLAFRHR-------LWDLGLGVAESMDTAQRGMGLGWPEARELI 100 (396)
T ss_dssp SSCEEEECCCCBCTTSCCCT-TTCCCBCHHH-----HHHHHHH-------HHHTTCEEEETCGGGTBTTTBCHHHHHHHH
T ss_pred chhhhhhhhhccCccccCCC-CCcccCChHH-----HHHHHHH-------HHHccccHHHHHHHhhccCCCCcHHHHHHH
Confidence 3445544 333322 3333 4578899982 3333332 245566665 77888999999999999999
Q ss_pred HHHHHHhcCC-CceEEEecCCC--------CHHHHH----HHHHHHHhCCCCEEEECCCCC--CCCCCHHHHHHHHHHHH
Q psy9602 153 EAWMTEAKTH-GFTVMVQIGGT--------CFQEVV----ELAKHAESLNVHAVLCLPELF--FTPASVEDLVDYLRDVG 217 (239)
Q Consensus 153 ~~vve~~~G~-rvpVIaGVg~~--------St~eAI----elar~A~~aGAdaVlV~PP~y--~~~~s~e~iv~yf~~Va 217 (239)
+....+++.. ...|..|++.. ++++++ |+....++.|+..||...=.. ... ++++..+-|..|.
T Consensus 101 rRs~aeA~~~pg~~ia~G~GTDqL~~~~~~~l~~V~~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A~-~pdDY~~VY~~vL 179 (396)
T 4dnh_A 101 RRSLAEARGRPDALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEGGRIILMASRALAAAAK-GPEDYIRVYDRVL 179 (396)
T ss_dssp HHHHHHHHTSSSCCEEEEECCTTSCCCTTCCHHHHHHHHHHHHHHHHHTTCCEEECCCHHHHHHCC-SHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCeeeeccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEehhHHHHHHhC-CHHHHHHHHHHHH
Confidence 9988776541 25677788732 455554 477888999988887664322 122 8899999999999
Q ss_pred hhCCCCcEEEEe
Q psy9602 218 EAAPATPLFYYH 229 (239)
Q Consensus 218 eatpdLPIiLYN 229 (239)
+.+ +-||||+=
T Consensus 180 ~q~-~~PVILHW 190 (396)
T 4dnh_A 180 SQV-KEPVIIHW 190 (396)
T ss_dssp HHC-SSCEEEEE
T ss_pred Hhc-CCCEEEEe
Confidence 999 99999973
No 206
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=80.44 E-value=3.5 Score=37.94 Aligned_cols=62 Identities=13% Similarity=0.122 Sum_probs=45.8
Q ss_pred CceEEEecC---CCCHHHHHHHHHHHHhCCCCEEEEC--------CCCC--CCC---------------CCHHHHHHHHH
Q psy9602 163 GFTVMVQIG---GTCFQEVVELAKHAESLNVHAVLCL--------PELF--FTP---------------ASVEDLVDYLR 214 (239)
Q Consensus 163 rvpVIaGVg---~~St~eAIelar~A~~aGAdaVlV~--------PP~y--~~~---------------~s~e~iv~yf~ 214 (239)
.+-||++++ ..|.+.+.++++.|+++|||+|=.. .|+. |+. ++. +-+..+.
T Consensus 19 ~~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~-e~~~~L~ 97 (349)
T 2wqp_A 19 EPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNE-EDEIKLK 97 (349)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCH-HHHHHHH
T ss_pred ceEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCH-HHHHHHH
Confidence 367888776 4689999999999999999999876 6654 431 133 3345566
Q ss_pred HHHhhCCCCcEE
Q psy9602 215 DVGEAAPATPLF 226 (239)
Q Consensus 215 ~VaeatpdLPIi 226 (239)
+.++.. +++++
T Consensus 98 ~~~~~~-Gi~~~ 108 (349)
T 2wqp_A 98 EYVESK-GMIFI 108 (349)
T ss_dssp HHHHHT-TCEEE
T ss_pred HHHHHh-CCeEE
Confidence 677777 78887
No 207
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=80.43 E-value=6.8 Score=32.56 Aligned_cols=75 Identities=11% Similarity=-0.053 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++.+.+.+...+..+++.....+.+...++.+...+.++|++++.|+.. ++ + .++.+.+ . ++|+++
T Consensus 25 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----~~-~---~~~~l~~-~-~iPvV~ 94 (288)
T 3gv0_A 25 TSQMVFGITEVLSTTQYHLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEP----ND-P---RVRFMTE-R-NMPFVT 94 (288)
T ss_dssp HHHHHHHHHHHHTTSSCEEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCT----TC-H---HHHHHHH-T-TCCEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCC----Cc-H---HHHHHhh-C-CCCEEE
Confidence 45556655555544356677665555555555566667778999999986432 11 2 2344444 4 799999
Q ss_pred EeCCC
Q psy9602 228 YHIPM 232 (239)
Q Consensus 228 YN~P~ 232 (239)
+|.+.
T Consensus 95 i~~~~ 99 (288)
T 3gv0_A 95 HGRSD 99 (288)
T ss_dssp ESCCC
T ss_pred ECCcC
Confidence 98753
No 208
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=80.33 E-value=3.8 Score=33.60 Aligned_cols=57 Identities=16% Similarity=0.117 Sum_probs=35.7
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC--CCCC-CHHHHHHHHHHHHhhCCC-CcEEE
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF--FTPA-SVEDLVDYLRDVGEAAPA-TPLFY 227 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y--~~~~-s~e~iv~yf~~Vaeatpd-LPIiL 227 (239)
+++|++..+..+ ++.+.+.|+|.+++.|-+. .++. ....-.++++.+.+.. + +||++
T Consensus 117 ~~~~~s~~t~~e----~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~-~~~pvia 177 (227)
T 2tps_A 117 MILGVSAHTMSE----VKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQG-ISIPIVG 177 (227)
T ss_dssp SEEEEEECSHHH----HHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTT-CCCCEEE
T ss_pred cEEEEecCCHHH----HHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhC-CCCCEEE
Confidence 667877667665 3556788999999865221 1110 0011256778888877 5 89875
No 209
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=80.06 E-value=6 Score=33.93 Aligned_cols=78 Identities=8% Similarity=0.034 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEecC----CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHh--
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQIG----GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGE-- 218 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGVg----~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vae-- 218 (239)
.+...++++.+. ++ ++.||+.-- ..+.++.+++.+.+++.|||-+=+.... . +.++....++....
T Consensus 111 ~~~~~~l~~~~~---~~-~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a---~-~~~D~l~ll~~~~~~~ 182 (238)
T 1sfl_A 111 IEKHQRIITHLQ---QY-NKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMP---H-NKNDVLNLLQAMSTFS 182 (238)
T ss_dssp HHHHHHHHHHHH---HT-TCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECC---S-SHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH---hc-CCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecC---C-CHHHHHHHHHHHHHHh
Confidence 333444444433 23 577887542 4567899999999999999988666432 2 55665555544333
Q ss_pred -hCCCCcEEEEeCC
Q psy9602 219 -AAPATPLFYYHIP 231 (239)
Q Consensus 219 -atpdLPIiLYN~P 231 (239)
.. +.|++.|+.=
T Consensus 183 ~~~-~~P~I~~~MG 195 (238)
T 1sfl_A 183 DTM-DCKVVGISMS 195 (238)
T ss_dssp HHC-SSEEEEEECT
T ss_pred hcC-CCCEEEEECC
Confidence 34 7999999874
No 210
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=79.97 E-value=27 Score=33.75 Aligned_cols=96 Identities=10% Similarity=0.036 Sum_probs=69.9
Q ss_pred hHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC---------CCHHHHHHHHHHHHhCCC
Q psy9602 120 GITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG---------TCFQEVVELAKHAESLNV 190 (239)
Q Consensus 120 ~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~---------~St~eAIelar~A~~aGA 190 (239)
-++..+++|++++++-|. .+.+|=+.+++.+.+... ++|+++.++- .++.+++..+ .+.|+
T Consensus 131 qi~~l~~~gvD~l~~ET~-----~~~~Ea~aa~~a~~~~~~--~~Pv~vS~t~~~~g~~~~G~~~~~~~~~l---~~~~~ 200 (566)
T 1q7z_A 131 TVEIMVEEGVDGIIFETF-----SDILELKAAVLAAREVSR--DVFLIAHMTFDEKGRSLTGTDPANFAITF---DELDI 200 (566)
T ss_dssp HHHHHHHTTCSEEEEEEE-----CCHHHHHHHHHHHHHHCS--SSCEEEEECCCTTSCCTTSCCHHHHHHHH---HTSSC
T ss_pred HHHHHHhCCCCEEEEecc-----CCHHHHHHHHHHHHHhCC--CCcEEEEEEEcCCCeeCCCCcHHHHHHHh---hccCC
Confidence 344556888998876543 466888888888776533 5899997753 3566666554 45789
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 191 HAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 191 daVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+++.+-= .. .++.+..+.+.+...+ +.|+++|-|-
T Consensus 201 ~avG~NC--~~---gp~~~~~~l~~l~~~~-~~p~~vyPNa 235 (566)
T 1q7z_A 201 DALGINC--SL---GPEEILPIFQELSQYT-DKFLVVEPNA 235 (566)
T ss_dssp SEEEEES--SS---CHHHHHHHHHHHHHTC-CSEEEEECCS
T ss_pred CEEEEeC--CC---CHHHHHHHHHHHHhcC-CCEEEEEcCC
Confidence 9888761 11 5699999999999988 8999999874
No 211
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=79.97 E-value=15 Score=31.10 Aligned_cols=62 Identities=11% Similarity=0.075 Sum_probs=43.2
Q ss_pred CceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
.+.+++- .+..+....++.++.....|+|++++.|...- .+...++.+.+ . ++|+++||.+.
T Consensus 33 g~~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~------~~~~~~~~a~~-~-gipvV~~d~~~ 95 (316)
T 1tjy_A 33 GIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPD------GLCPALKRAMQ-R-GVKILTWDSDT 95 (316)
T ss_dssp TCEEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSS------TTHHHHHHHHH-T-TCEEEEESSCC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHH------HHHHHHHHHHH-C-cCEEEEecCCC
Confidence 3566664 46678888889999998999999999874321 12223444444 4 79999999753
No 212
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=79.90 E-value=10 Score=31.85 Aligned_cols=60 Identities=17% Similarity=0.048 Sum_probs=43.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++.....+.+...++.+...+.++|++++.|+.. +.++ .++.+.+ ++|++++|.+.
T Consensus 45 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~----~~~~---~~~~l~~---~iPvV~i~~~~ 104 (303)
T 3kke_A 45 STDVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRRED----FDDD---MLAAVLE---GVPAVTINSRV 104 (303)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTT----CCHH---HHHHHHT---TSCEEEESCCC
T ss_pred CCEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCC----CcHH---HHHHHhC---CCCEEEECCcC
Confidence 45677777777788888899999999999999997642 2221 4455544 59999998764
No 213
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=79.88 E-value=2.8 Score=37.10 Aligned_cols=50 Identities=10% Similarity=0.011 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF 201 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~ 201 (239)
--.++++.+.+.+++ ++|||+.=+=.+.+++.+... +|||+|++.-+..+
T Consensus 274 ~~~~~i~~i~~~~~~-~ipVi~~GGI~~~~da~~~l~----~GAd~V~igr~~l~ 323 (336)
T 1f76_A 274 KSTEIIRRLSLELNG-RLPIIGVGGIDSVIAAREKIA----AGASLVQIYSGFIF 323 (336)
T ss_dssp HHHHHHHHHHHHHTT-SSCEEEESSCCSHHHHHHHHH----HTCSEEEESHHHHH
T ss_pred HHHHHHHHHHHHhCC-CCCEEEECCCCCHHHHHHHHH----CCCCEEEeeHHHHh
Confidence 345778888888877 799986555556777766553 59999999987655
No 214
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=79.79 E-value=4.5 Score=39.34 Aligned_cols=78 Identities=12% Similarity=0.086 Sum_probs=51.1
Q ss_pred CHHHHHH----HHHHHHHHhcCCCceEEEecC-------CCCHHHHHHHHHHHHhCCCCEEEECC---------CCCCCC
Q psy9602 144 TTAERKL----NLEAWMTEAKTHGFTVMVQIG-------GTCFQEVVELAKHAESLNVHAVLCLP---------ELFFTP 203 (239)
Q Consensus 144 T~eER~~----li~~vve~~~G~rvpVIaGVg-------~~St~eAIelar~A~~aGAdaVlV~P---------P~y~~~ 203 (239)
|.+-|.+ +++.+.+.++. +.||.+=++ +.+.++++++++.+++ |+|.+-|.. |.+..+
T Consensus 202 s~enR~r~~~ei~~avr~~~g~-~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~ 279 (690)
T 3k30_A 202 SLENRMRLLRELLEDTLDECAG-RAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPE 279 (690)
T ss_dssp SHHHHTHHHHHHHHHHHHHHTT-SSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCT
T ss_pred CHHHHHHHHHHHHHHHHHHhCC-CceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCc
Confidence 4565655 45555555655 678887663 3457899999999999 799987653 323222
Q ss_pred CCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 204 ASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 204 ~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.....+.+.|.+++ ++|||.
T Consensus 280 ---~~~~~~~~~i~~~~-~~pvi~ 299 (690)
T 3k30_A 280 ---GRQEEFVAGLKKLT-TKPVVG 299 (690)
T ss_dssp ---TTTHHHHTTSGGGC-SSCEEE
T ss_pred ---cccHHHHHHHHHHc-CCeEEE
Confidence 12245566777777 899875
No 215
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=79.71 E-value=8.2 Score=34.06 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=54.4
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+-.+++-+...+.+++++.++.+.+.|+|+|=+=--++-.....+.+.+....|.+.++++|||+=.-+.
T Consensus 39 ~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~ 108 (276)
T 3o1n_A 39 APKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSA 108 (276)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBG
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEh
Confidence 4456679999999999999999999999999887655543313477888888888877679998765543
No 216
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=79.68 E-value=2.4 Score=39.91 Aligned_cols=90 Identities=10% Similarity=0.001 Sum_probs=58.3
Q ss_pred cCCCCEEEeccccCCcC----------CC----HHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCC
Q psy9602 126 APIIDQMVNGTTGEGVS----------MT----TAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVH 191 (239)
Q Consensus 126 ~gg~glvV~GstGE~~s----------LT----~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAd 191 (239)
.|.+++++.+++.+-.. || ..--.+++..+.+.+++ ++|||+.=+=.+.+++++... +|||
T Consensus 295 aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~-~iPIIg~GGI~s~eDa~e~l~----aGAd 369 (415)
T 3i65_A 295 TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-QIPIIASGGIFSGLDALEKIE----AGAS 369 (415)
T ss_dssp HTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTT-CSCEEECSSCCSHHHHHHHHH----HTEE
T ss_pred cCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCC-CCCEEEECCCCCHHHHHHHHH----cCCC
Confidence 35567778877765221 22 12335788888888887 899987556667777777664 6999
Q ss_pred EEEECCCCCCC-CCCHHHHHHHHHHHHhhC
Q psy9602 192 AVLCLPELFFT-PASVEDLVDYLRDVGEAA 220 (239)
Q Consensus 192 aVlV~PP~y~~-~~s~e~iv~yf~~Vaeat 220 (239)
+|++..+..+. |.--..+.+.++...+..
T Consensus 370 ~VqIgra~l~~GP~~~~~i~~~L~~~l~~~ 399 (415)
T 3i65_A 370 VCQLYSCLVFNGMKSAVQIKRELNHLLYQR 399 (415)
T ss_dssp EEEESHHHHHHGGGHHHHHHHHHHHHHHHT
T ss_pred EEEEcHHHHhcCHHHHHHHHHHHHHHHHHc
Confidence 99999887554 312344555555544443
No 217
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=79.57 E-value=5.4 Score=35.63 Aligned_cols=82 Identities=20% Similarity=0.149 Sum_probs=54.7
Q ss_pred cCCCC-EEEecc-ccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Q psy9602 126 APIID-QMVNGT-TGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTP 203 (239)
Q Consensus 126 ~gg~g-lvV~Gs-tGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~ 203 (239)
+-|+. +++.|. .|-+..++. .++++.+++.. ++|||++-+=.+.++ +..|.++|||+|+|-.-..-..
T Consensus 154 ~~G~~aVmPlg~pIGsG~Gi~~---~~lI~~I~e~~---~vPVI~eGGI~TPsD----Aa~AmeLGAdgVlVgSAI~~a~ 223 (265)
T 1wv2_A 154 EIGCIAVMPLAGLIGSGLGICN---PYNLRIILEEA---KVPVLVDAGVGTASD----AAIAMELGCEAVLMNTAIAHAK 223 (265)
T ss_dssp HSCCSEEEECSSSTTCCCCCSC---HHHHHHHHHHC---SSCBEEESCCCSHHH----HHHHHHHTCSEEEESHHHHTSS
T ss_pred HhCCCEEEeCCccCCCCCCcCC---HHHHHHHHhcC---CCCEEEeCCCCCHHH----HHHHHHcCCCEEEEChHHhCCC
Confidence 44554 567565 566666655 56677777743 689999666666655 4567788999999987554333
Q ss_pred CCHHHHHHHHHHHHh
Q psy9602 204 ASVEDLVDYLRDVGE 218 (239)
Q Consensus 204 ~s~e~iv~yf~~Vae 218 (239)
++..+...|..-.+
T Consensus 224 -dP~~ma~af~~Av~ 237 (265)
T 1wv2_A 224 -DPVMMAEAMKHAIV 237 (265)
T ss_dssp -SHHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHH
Confidence 66777777666433
No 218
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=79.53 E-value=7.7 Score=32.08 Aligned_cols=76 Identities=13% Similarity=0.023 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCC--CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGT--CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~--St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
+.++++-+.+.+...+..+++..... +.....+.++.+.+.++|++++.|...-. +...++.+. . ++|+
T Consensus 20 ~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~------~~~~~~~~~--~-~iPv 90 (304)
T 3o1i_D 20 WLSVNYGMVSEAEKQGVNLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHA------YEHNLKSWV--G-NTPV 90 (304)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTS------STTTHHHHT--T-TSCE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhH------HHHHHHHHc--C-CCCE
Confidence 34444444333332245666666555 88888999999999999999999754321 112344554 4 7999
Q ss_pred EEEeCCC
Q psy9602 226 FYYHIPM 232 (239)
Q Consensus 226 iLYN~P~ 232 (239)
++++.+.
T Consensus 91 V~~~~~~ 97 (304)
T 3o1i_D 91 FATVNQL 97 (304)
T ss_dssp EECSSCC
T ss_pred EEecCCC
Confidence 9996654
No 219
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=79.49 E-value=16 Score=34.83 Aligned_cols=65 Identities=12% Similarity=0.059 Sum_probs=40.9
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
+...++.+..++++.++. . ..+-..++++.+.+... .+||++|-.. ..+.++.+.++|+|++.+-
T Consensus 261 a~aLveaGvd~I~Id~a~-g---~~~~v~~~i~~i~~~~~--~~~vi~g~v~-----t~e~a~~~~~aGad~i~vg 325 (511)
T 3usb_A 261 IDALVKASVDAIVLDTAH-G---HSQGVIDKVKEVRAKYP--SLNIIAGNVA-----TAEATKALIEAGANVVKVG 325 (511)
T ss_dssp HHHHHHTTCSEEEEECSC-T---TSHHHHHHHHHHHHHCT--TSEEEEEEEC-----SHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHhhccceEEecccc-c---chhhhhhHHHHHHHhCC--CceEEeeeec-----cHHHHHHHHHhCCCEEEEC
Confidence 334466677665443332 1 12345567777777654 4799885332 3456788889999999983
No 220
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=79.44 E-value=12 Score=31.55 Aligned_cols=79 Identities=6% Similarity=-0.086 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHHhcCCCceE--EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTV--MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpV--IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
..++-.+.++.+++.+.+ ++| |.-....+.++..+.++.++++|+|++....-++....+.+.+....+.+. .
T Consensus 100 ~~~~~~~~i~~v~~a~~p--v~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~v~--~- 174 (225)
T 1mzh_A 100 KYDFVVEELKEIFRETPS--AVHKVIVETPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSSAK--G- 174 (225)
T ss_dssp CHHHHHHHHHHHHHTCTT--SEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHHHT--T-
T ss_pred ChHHHHHHHHHHHHHhcC--ceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHhC--C-
Confidence 345666667777776642 332 333355677889999999999999999554433222114444444443331 1
Q ss_pred CCcEEE
Q psy9602 222 ATPLFY 227 (239)
Q Consensus 222 dLPIiL 227 (239)
++||+.
T Consensus 175 ~ipVia 180 (225)
T 1mzh_A 175 RIKVKA 180 (225)
T ss_dssp SSEEEE
T ss_pred CCcEEE
Confidence 588874
No 221
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=79.35 E-value=14 Score=31.54 Aligned_cols=74 Identities=14% Similarity=0.150 Sum_probs=46.8
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|+.. + +.+... +.+.. ++|++++
T Consensus 74 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~----~-~~~~~~---l~~~~-~iPvV~~ 144 (340)
T 1qpz_A 74 AEIIEAVEKNCFQKGYTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEY----P-EPLLAM---LEEYR-HIPMVVM 144 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCC----C-HHHHHH---HHTTT-TSCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCC----C-hHHHHH---HHhhC-CCCEEEE
Confidence 3444444443332245666666667777777888888888999999986431 2 233333 32334 7999999
Q ss_pred eCC
Q psy9602 229 HIP 231 (239)
Q Consensus 229 N~P 231 (239)
|.+
T Consensus 145 ~~~ 147 (340)
T 1qpz_A 145 DWG 147 (340)
T ss_dssp EES
T ss_pred ecc
Confidence 864
No 222
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=79.09 E-value=4.1 Score=36.12 Aligned_cols=62 Identities=19% Similarity=0.211 Sum_probs=46.5
Q ss_pred CceEEEecCCCCH--------HHHHHHHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCF--------QEVVELAKHAESLNVHAVLCLP-ELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St--------~eAIelar~A~~aGAdaVlV~P-P~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+..||+=+--.|. .+..++|+.+++.||+++-|+. |.||.. +.+ |.+.|.+++ ++||+.-+|
T Consensus 58 ~~~vIaE~KraSPSkG~i~~~~dp~~~A~~y~~~GA~~IsVltd~~~f~G-s~~----~L~~ir~~v-~lPVl~Kdf 128 (272)
T 3tsm_A 58 QFALIAEIKKASPSKGLIRPDFDPPALAKAYEEGGAACLSVLTDTPSFQG-APE----FLTAARQAC-SLPALRKDF 128 (272)
T ss_dssp CCEEEEEECSEETTTEESCSSCCHHHHHHHHHHTTCSEEEEECCSTTTCC-CHH----HHHHHHHTS-SSCEEEESC
T ss_pred CceEEEEeccCCCCCCccCCCCCHHHHHHHHHHCCCCEEEEeccccccCC-CHH----HHHHHHHhc-CCCEEECCc
Confidence 5778886543322 3678999999999999998865 667765 554 668888888 899987765
No 223
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=78.80 E-value=4.1 Score=37.14 Aligned_cols=65 Identities=12% Similarity=0.008 Sum_probs=46.6
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHh-CCCCEEEECCCCC-CCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAES-LNVHAVLCLPELF-FTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~-aGAdaVlV~PP~y-~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
|.--++.+.-...+++++.++.+.+ .|+.++.+.|.+. +.+ +++.+...|+.+.+. ++||+++--
T Consensus 146 Rf~g~a~v~~~~~~~a~~EL~r~~~~~G~~Gv~l~~~~~g~~l-~d~~~~pi~~~~~e~--g~pV~iH~g 212 (373)
T 4inf_A 146 RFIGMGTVAPQDPEWSAREIHRGARELGFKGIQINSHTQGRYL-DEEFFDPIFRALVEV--DQPLYIHPA 212 (373)
T ss_dssp TEEECBCCCTTSHHHHHHHHHHHHHTSCCCCEEECSCBTTBCT-TSGGGHHHHHHHHHH--TCCEEECCC
T ss_pred EEEEEEecCCCCHHHHHHHHHHHHhhcCceEEEECCCCCCCCC-CCcchHHHHHHHHHc--CCeEEECCC
Confidence 4444445555566778888888776 5999999876432 233 678899999998886 799999754
No 224
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=78.59 E-value=6.4 Score=32.70 Aligned_cols=60 Identities=8% Similarity=-0.026 Sum_probs=38.7
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++..+..+.....+..+...+.++|++++.|+.. + +. .++.+.+ . ++|++++|.+.
T Consensus 38 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----~-~~---~~~~l~~-~-~iPvV~~~~~~ 97 (287)
T 3bbl_A 38 NYFVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINY----N-DP---RVQFLLK-Q-KFPFVAFGRSN 97 (287)
T ss_dssp TCEEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCT----T-CH---HHHHHHH-T-TCCEEEESCCS
T ss_pred CCEEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCC----C-cH---HHHHHHh-c-CCCEEEECCcC
Confidence 35666655555555556677777888999999987542 1 12 2344444 4 79999998753
No 225
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=78.59 E-value=11 Score=30.99 Aligned_cols=60 Identities=20% Similarity=0.295 Sum_probs=40.4
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+..+++.....+.....+..+...+.++|++++.|+. . +. .. ++.+.+.. ++|++++|.+
T Consensus 51 g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~---~-~~-~~---~~~l~~~~-~iPvV~~~~~ 110 (296)
T 3brq_A 51 GRQLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRF---L-SV-DE---IDDIIDAH-SQPIMVLNRR 110 (296)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSS---S-CH-HH---HHHHHHTC-SSCEEEESCC
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCC---C-Ch-HH---HHHHHhcC-CCCEEEEccc
Confidence 4566666666677777788888888899999998653 1 32 22 33444414 7999998865
No 226
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=78.50 E-value=11 Score=32.08 Aligned_cols=72 Identities=7% Similarity=0.008 Sum_probs=44.0
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.++. . +++ .++.+.+. ++|++++|
T Consensus 80 ~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~---~-~~~----~~~~l~~~--~iPvV~~~ 149 (332)
T 2o20_A 80 AITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSS---L-DEK----IRTSLKNS--RTPVVLVG 149 (332)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSSC---C-CHH----HHHHHHHH--CCCEEEES
T ss_pred HHHHHHHHHHHHcCCEEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCCC---C-CHH----HHHHHHhC--CCCEEEEc
Confidence 34444433332224566666666677777777777778899999988743 1 322 23344443 68999988
Q ss_pred CC
Q psy9602 230 IP 231 (239)
Q Consensus 230 ~P 231 (239)
.+
T Consensus 150 ~~ 151 (332)
T 2o20_A 150 TI 151 (332)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 227
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=78.39 E-value=11 Score=30.83 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCceEEEecC--CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIG--GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg--~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
.++++-+.+.+...+..+++... ..+.+...+..+...+.++|++++.|+.. +.+...++.+.+ . ++|++
T Consensus 23 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~------~~~~~~~~~~~~-~-~iPvV 94 (289)
T 3brs_A 23 SVLVEGAQMAAKEYEIKLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADY------EKTYDAAKEIKD-A-GIKLI 94 (289)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCT------TTTHHHHTTTGG-G-TCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCCh------HHhHHHHHHHHH-C-CCcEE
Confidence 34444444333221356666544 56777788888888889999999987542 112233444444 3 79999
Q ss_pred EEeCCC
Q psy9602 227 YYHIPM 232 (239)
Q Consensus 227 LYN~P~ 232 (239)
++|.+.
T Consensus 95 ~~~~~~ 100 (289)
T 3brs_A 95 VIDSGM 100 (289)
T ss_dssp EESSCC
T ss_pred EECCCC
Confidence 998753
No 228
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=78.34 E-value=9.2 Score=31.79 Aligned_cols=75 Identities=9% Similarity=0.057 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHH---HHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVE---LAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIe---lar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
..++++-+.+.+...+..+++.....+.+...+ ..+...+.++|++++.|+.. + +.. ++.+.+. ++|
T Consensus 23 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~----~-~~~---~~~l~~~--~iP 92 (290)
T 2rgy_A 23 YGTILKQTDLELRAVHRHVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDL----H-DED---LDELHRM--HPK 92 (290)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSS----C-HHH---HHHHHHH--CSS
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCC----C-HHH---HHHHhhc--CCC
Confidence 444555444443322456666555555555556 67777788999999987432 3 223 3344443 699
Q ss_pred EEEEeCCC
Q psy9602 225 LFYYHIPM 232 (239)
Q Consensus 225 IiLYN~P~ 232 (239)
++++|.+.
T Consensus 93 vV~~~~~~ 100 (290)
T 2rgy_A 93 MVFLNRAF 100 (290)
T ss_dssp EEEESSCC
T ss_pred EEEEcccc
Confidence 99998753
No 229
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=78.31 E-value=17 Score=33.48 Aligned_cols=56 Identities=13% Similarity=-0.018 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHhCCCCEEEECC-----------CCCCCCC-----C----HHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 176 QEVVELAKHAESLNVHAVLCLP-----------ELFFTPA-----S----VEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~P-----------P~y~~~~-----s----~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
++-.+-|+.|+++|+|+|-|-. |...+-. + ..-+.+-+++|.+++++.||.+==.|
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~ 246 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSP 246 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECS
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 4667788999999999999876 5532220 2 23356666777777753487775444
No 230
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=78.28 E-value=4.2 Score=34.74 Aligned_cols=89 Identities=10% Similarity=0.029 Sum_probs=50.3
Q ss_pred hhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Q psy9602 124 RMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTP 203 (239)
Q Consensus 124 ~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~ 203 (239)
..+.|.++++++++. .++.++-.++++.+.+. ++++++.+.. .+.++.|+++|+|.+.+..--|...
T Consensus 97 ~~~aGad~I~l~~~~---~~~p~~l~~~i~~~~~~----g~~v~~~v~t------~eea~~a~~~Gad~Ig~~~~g~t~~ 163 (229)
T 3q58_A 97 LAQAGADIIAFDASF---RSRPVDIDSLLTRIRLH----GLLAMADCST------VNEGISCHQKGIEFIGTTLSGYTGP 163 (229)
T ss_dssp HHHHTCSEEEEECCS---SCCSSCHHHHHHHHHHT----TCEEEEECSS------HHHHHHHHHTTCSEEECTTTTSSSS
T ss_pred HHHcCCCEEEECccc---cCChHHHHHHHHHHHHC----CCEEEEecCC------HHHHHHHHhCCCCEEEecCccCCCC
Confidence 345566666655553 12334455566665542 4788887753 5667889999999997533211100
Q ss_pred -CCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 204 -ASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 204 -~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.....-++.++.+.+. ++|++-
T Consensus 164 ~~~~~~~~~li~~l~~~--~ipvIA 186 (229)
T 3q58_A 164 ITPVEPDLAMVTQLSHA--GCRVIA 186 (229)
T ss_dssp CCCSSCCHHHHHHHHTT--TCCEEE
T ss_pred CcCCCCCHHHHHHHHHc--CCCEEE
Confidence 0001123566777664 688873
No 231
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=78.28 E-value=1.5 Score=39.49 Aligned_cols=68 Identities=16% Similarity=0.097 Sum_probs=44.6
Q ss_pred HHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC-----CCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 151 NLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL-----PELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 151 li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~-----PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
+-.-+.+..+| -|+.-+.. .++|+.+++.||++++++ .+.++.-..-..-.++.++|.+++ ++||
T Consensus 12 ~~~~~~~~~kg---gv~~d~~~------~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-~iPv 81 (297)
T 4adt_A 12 LKHGWCEMLKG---GVIMDVKN------VEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-SINV 81 (297)
T ss_dssp HHHHHHHTTTT---CEEEEESS------HHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-CSEE
T ss_pred HHHhHHHHhcC---CcccCCCc------HHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-CCCE
Confidence 44455666666 45555544 277999999999999999 334443101112467788899999 9999
Q ss_pred EEE
Q psy9602 226 FYY 228 (239)
Q Consensus 226 iLY 228 (239)
+..
T Consensus 82 l~k 84 (297)
T 4adt_A 82 LAK 84 (297)
T ss_dssp EEE
T ss_pred EEe
Confidence 976
No 232
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=78.08 E-value=10 Score=33.79 Aligned_cols=42 Identities=17% Similarity=0.048 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhcCCCceEEE-ecCC-CCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMV-QIGG-TCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIa-GVg~-~St~eAIelar~A~~aGAdaVlV~ 196 (239)
..++++.+.+.+ ++||++ +++. .+ .+.++.++++|+|+|.+.
T Consensus 166 ~~~~i~~vr~~~---~~Pv~vK~~~~~~~----~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 166 ALKRIEQICSRV---SVPVIVKEVGFGMS----KASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHHC---SSCEEEEEESSCCC----HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHc---CCCEEEEecCCCCC----HHHHHHHHHcCCCEEEEc
Confidence 456777777665 479888 4322 23 466788999999999995
No 233
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=78.05 E-value=2.9 Score=35.02 Aligned_cols=52 Identities=19% Similarity=0.112 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 175 FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 175 t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
..+.++.++.+++.|+|.+.+..+..... ......+..+.+.+.+ ++||++-
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~-~iPvi~~ 81 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISATHE-ERAILLDVVARVAERV-FIPLTVG 81 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSSTT-CHHHHHHHHHHHHTTC-CSCEEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCcccc-CccccHHHHHHHHHhC-CCCEEEE
Confidence 34778889999999999998886654333 4556678889999988 8999973
No 234
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=77.63 E-value=4.2 Score=36.86 Aligned_cols=73 Identities=7% Similarity=0.037 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
.++ .++++.+.+.++. ++++++-+ ++.+.++++++++..++.|++.+ -.|. .+ +-.+.++.|.+.+ ++
T Consensus 192 ~~~-~e~v~avr~a~g~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~----~d~~~~~~l~~~~-~i 260 (388)
T 2nql_A 192 DGP-AAEIANLRQVLGP-QAKIAADMHWNQTPERALELIAEMQPFDPWFA--EAPV--WT----EDIAGLEKVSKNT-DV 260 (388)
T ss_dssp TCH-HHHHHHHHHHHCT-TSEEEEECCSCSCHHHHHHHHHHHGGGCCSCE--ECCS--CT----TCHHHHHHHHTSC-CS
T ss_pred hHH-HHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHHHHHhhcCCCEE--ECCC--Ch----hhHHHHHHHHhhC-CC
Confidence 456 8889999998876 79999865 46689999999999999998865 3443 22 1256778888888 79
Q ss_pred cEEEE
Q psy9602 224 PLFYY 228 (239)
Q Consensus 224 PIiLY 228 (239)
||+.-
T Consensus 261 PI~~d 265 (388)
T 2nql_A 261 PIAVG 265 (388)
T ss_dssp CEEEC
T ss_pred CEEEe
Confidence 99863
No 235
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=77.58 E-value=21 Score=29.60 Aligned_cols=92 Identities=12% Similarity=0.012 Sum_probs=50.7
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCC-EEEECC-C
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVH-AVLCLP-E 198 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAd-aVlV~P-P 198 (239)
++...+.|.+.++++. +..++-.++++.+.+. ...+++++...+..+.++..... +| .+.+++ |
T Consensus 101 ~~~~~~~Gad~v~~~~------~~~~~~~~~~~~~~~~----g~~~~~~i~~~t~~e~~~~~~~~----~d~~i~~~~~~ 166 (248)
T 1geq_A 101 LAEAKASGVDGILVVD------LPVFHAKEFTEIAREE----GIKTVFLAAPNTPDERLKVIDDM----TTGFVYLVSLY 166 (248)
T ss_dssp HHHHHHHTCCEEEETT------CCGGGHHHHHHHHHHH----TCEEEEEECTTCCHHHHHHHHHH----CSSEEEEECCC
T ss_pred HHHHHHCCCCEEEECC------CChhhHHHHHHHHHHh----CCCeEEEECCCCHHHHHHHHHhc----CCCeEEEEECC
Confidence 3344566666665553 2334555566655543 35778888776666665544332 45 433332 2
Q ss_pred CCCCCC--CHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 199 LFFTPA--SVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 199 ~y~~~~--s~e~iv~yf~~VaeatpdLPIiL 227 (239)
-+.... -.....++++.+.+.+ ++||++
T Consensus 167 G~~g~~~~~~~~~~~~i~~l~~~~-~~pi~~ 196 (248)
T 1geq_A 167 GTTGAREEIPKTAYDLLRRAKRIC-RNKVAV 196 (248)
T ss_dssp -------CCCHHHHHHHHHHHHHC-SSCEEE
T ss_pred ccCCCCCCCChhHHHHHHHHHhhc-CCCEEE
Confidence 111110 1145678999999988 789874
No 236
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=77.54 E-value=15 Score=30.48 Aligned_cols=76 Identities=16% Similarity=0.026 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
+.++++-+.+.+...+..+++.. +..+.+...+..+.....++|++++.|+.. . .... .++.+.+ . ++|+
T Consensus 16 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~-~--~~~~---~~~~~~~-~-~iPv 87 (288)
T 1gud_A 16 WVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSS-V--NLVM---PVARAWK-K-GIYL 87 (288)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSS-S--TTHH---HHHHHHH-T-TCEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh-H--HHHH---HHHHHHH-C-CCeE
Confidence 34444444443322234555554 567777778888888889999999987532 1 1122 3444444 4 7999
Q ss_pred EEEeCC
Q psy9602 226 FYYHIP 231 (239)
Q Consensus 226 iLYN~P 231 (239)
+++|.+
T Consensus 88 V~~~~~ 93 (288)
T 1gud_A 88 VNLDEK 93 (288)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 999875
No 237
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=77.51 E-value=18 Score=32.42 Aligned_cols=112 Identities=18% Similarity=0.177 Sum_probs=68.5
Q ss_pred hhHHhhhcCCCCEEEecccc---------CCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC----------------
Q psy9602 119 VGITLRMAPIIDQMVNGTTG---------EGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT---------------- 173 (239)
Q Consensus 119 ~~v~~~~~gg~glvV~GstG---------E~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~---------------- 173 (239)
..+..+-.+|.|+++.+.+. ....|..+|...-++.+++.+......+++++.+.
T Consensus 43 ~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~ 122 (340)
T 3gr7_A 43 IHYPARAVGQVGLIIVEATGVTPQGRISERDLGIWSDDHIAGLRELVGLVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAV 122 (340)
T ss_dssp HHHHHHHHTTCSEEEEEEEESSGGGCSSTTSEECSSTTHHHHHHHHHHHHHHTTCEEEEEEECCGGGCCSSSCCEESSSC
T ss_pred HHHHHHhcCCceEEEEcceEecccccCCCCCcccCCHHHHHHHHHHHHHHHhCCCeEEEEeccCCCccCCCCCccCCCCc
Confidence 34555567888987655431 12345667777777777766544345666655321
Q ss_pred ------------C-------HHHHHHHHHHHHhCCCCEEEECC-----------CCCCCCC-----CHH----HHHHHHH
Q psy9602 174 ------------C-------FQEVVELAKHAESLNVHAVLCLP-----------ELFFTPA-----SVE----DLVDYLR 214 (239)
Q Consensus 174 ------------S-------t~eAIelar~A~~aGAdaVlV~P-----------P~y~~~~-----s~e----~iv~yf~ 214 (239)
+ .++-.+-|+.|+++|+|+|-|-. |...+-. +-+ -+.+-.+
T Consensus 123 ~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~ 202 (340)
T 3gr7_A 123 PFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVID 202 (340)
T ss_dssp CSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHH
T ss_pred cccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHH
Confidence 1 33445678888999999999873 3322210 222 3566777
Q ss_pred HHHhhCCCCcEEEEeCC
Q psy9602 215 DVGEAAPATPLFYYHIP 231 (239)
Q Consensus 215 ~VaeatpdLPIiLYN~P 231 (239)
+|.+++ +.||.+==.|
T Consensus 203 avr~~v-~~pv~vRls~ 218 (340)
T 3gr7_A 203 AVREVW-DGPLFVRISA 218 (340)
T ss_dssp HHHHHC-CSCEEEEEES
T ss_pred HHHHhc-CCceEEEecc
Confidence 778888 8998885555
No 238
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=77.30 E-value=16 Score=32.68 Aligned_cols=75 Identities=11% Similarity=0.028 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-+ ++-+.++++++++..++.|++.+ --|. .+ . =.+.++.|.+.+ +
T Consensus 173 ~~~~~~e~v~avr~a~G~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~-~---d~~~~~~l~~~~-~ 242 (371)
T 2ovl_A 173 DLKEDVDRVSALREHLGD-SFPLMVDANMKWTVDGAIRAARALAPFDLHWI--EEPT--IP-D---DLVGNARIVRES-G 242 (371)
T ss_dssp SHHHHHHHHHHHHHHHCT-TSCEEEECTTCSCHHHHHHHHHHHGGGCCSEE--ECCS--CT-T---CHHHHHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECCC--Cc-c---cHHHHHHHHhhC-C
Confidence 456667889999998876 79998865 46689999999999999999865 3443 22 1 146677788887 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 243 iPI~~d 248 (371)
T 2ovl_A 243 HTIAGG 248 (371)
T ss_dssp SCEEEC
T ss_pred CCEEeC
Confidence 998863
No 239
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=77.24 E-value=13 Score=30.68 Aligned_cols=80 Identities=13% Similarity=0.146 Sum_probs=55.1
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHh
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGE 218 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vae 218 (239)
..++.++..++.+.+.+. ++.+.+ .....+.+...+.++.|.++|+..+.+.|.. +.++....+++
T Consensus 58 ~~~~~~~~~~~~~~l~~~----gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~--------~~~~~l~~~a~ 125 (262)
T 3p6l_A 58 FNLDAQTQKEIKELAASK----GIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPAL--------SDWDLVEKLSK 125 (262)
T ss_dssp TTCCHHHHHHHHHHHHHT----TCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCCG--------GGHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHc----CCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCCH--------HHHHHHHHHHH
Confidence 456777777776665553 344433 3334567778888999999999999997531 23355666777
Q ss_pred hCCCCcEEEEeCCCC
Q psy9602 219 AAPATPLFYYHIPMF 233 (239)
Q Consensus 219 atpdLPIiLYN~P~~ 233 (239)
.. ++.+.+-|.|..
T Consensus 126 ~~-gv~l~~En~~~~ 139 (262)
T 3p6l_A 126 QY-NIKISVHNHPQP 139 (262)
T ss_dssp HH-TCEEEEECCSSS
T ss_pred Hh-CCEEEEEeCCCc
Confidence 77 899999999864
No 240
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=76.93 E-value=4 Score=33.52 Aligned_cols=53 Identities=19% Similarity=0.173 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 176 QEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
++.++.++.+++.|+|++.+..+....+ ......+..+.+.+.+ ++|+++-..
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~-~~~~~~~~i~~i~~~~-~ipvi~~g~ 85 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPE-GRATFIDSVKRVAEAV-SIPVLVGGG 85 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTT-THHHHHHHHHHHHHHC-SSCEEEESS
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCcccc-CCcccHHHHHHHHHhc-CCCEEEECC
Confidence 3678889999999999998886544333 4456677889999988 899987543
No 241
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=76.92 E-value=14 Score=33.65 Aligned_cols=56 Identities=13% Similarity=0.020 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhCCCCEEEECC-----------CCCCCCC-----C----HHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 176 QEVVELAKHAESLNVHAVLCLP-----------ELFFTPA-----S----VEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~P-----------P~y~~~~-----s----~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
++-.+-|+.|+++|+|+|-+-. |...+-. + ..-+.+-+++|.+++++-||.+=-.|
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~ 242 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISP 242 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEecc
Confidence 4666788899999999999865 3322210 1 12356667777777752288875554
No 242
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=76.82 E-value=7.2 Score=34.54 Aligned_cols=85 Identities=19% Similarity=0.190 Sum_probs=64.8
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEec---CCCCHHHHHHHHHHHHhCCCCEEEECCCC--CCCCC-CHHHHHHHHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQI---GGTCFQEVVELAKHAESLNVHAVLCLPEL--FFTPA-SVEDLVDYLR 214 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGV---g~~St~eAIelar~A~~aGAdaVlV~PP~--y~~~~-s~e~iv~yf~ 214 (239)
..+|.+|....++.+...+ ++||++=. .+.+..++.+.++...++||++|-+---. --+.. +.+++.+..+
T Consensus 57 ~~vt~~em~~~~~~I~~~~---~~pviaD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l~~~~e~~~~I~ 133 (275)
T 2ze3_A 57 QTLTRDEMGREVEAIVRAV---AIPVNADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTELYDLDSQLRRIE 133 (275)
T ss_dssp SSSCHHHHHHHHHHHHHHC---SSCEEEECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCBCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhhc---CCCEEeecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCccCCHHHHHHHHH
Confidence 3689999999999999887 46999933 34589999999999999999999986422 11222 7889999999
Q ss_pred HHHhhCC--CCcEEEE
Q psy9602 215 DVGEAAP--ATPLFYY 228 (239)
Q Consensus 215 ~Vaeatp--dLPIiLY 228 (239)
++.++.. +.|++|.
T Consensus 134 aa~~a~~~~g~~~~i~ 149 (275)
T 2ze3_A 134 AARAAIDASGVPVFLN 149 (275)
T ss_dssp HHHHHHHHHTSCCEEE
T ss_pred HHHHhHhhcCCCeEEE
Confidence 9988731 3565553
No 243
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=76.67 E-value=6.5 Score=33.54 Aligned_cols=88 Identities=10% Similarity=0.038 Sum_probs=49.0
Q ss_pred hcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Q psy9602 125 MAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA 204 (239)
Q Consensus 125 ~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~ 204 (239)
.+.|.++++++++. .+++++-.++++.+.+. ++++++.+.. .+.++.|+++|+|.+.+..--|....
T Consensus 98 ~~~Gad~V~l~~~~---~~~p~~l~~~i~~~~~~----g~~v~~~v~t------~eea~~a~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 98 AQAGAAIIAVDGTA---RQRPVAVEALLARIHHH----HLLTMADCSS------VDDGLACQRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp HHHTCSEEEEECCS---SCCSSCHHHHHHHHHHT----TCEEEEECCS------HHHHHHHHHTTCSEEECTTTTSSSSS
T ss_pred HHcCCCEEEECccc---cCCHHHHHHHHHHHHHC----CCEEEEeCCC------HHHHHHHHhCCCCEEEEcCccCCCCC
Confidence 45566666655542 12234445555555442 4788887753 46678899999999975322111000
Q ss_pred -CHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 205 -SVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 205 -s~e~iv~yf~~VaeatpdLPIiL 227 (239)
....-++.++.+.+. ++|++-
T Consensus 165 ~~~~~~~~~i~~l~~~--~ipvIA 186 (232)
T 3igs_A 165 TPEEPDLPLVKALHDA--GCRVIA 186 (232)
T ss_dssp CCSSCCHHHHHHHHHT--TCCEEE
T ss_pred CCCCCCHHHHHHHHhc--CCcEEE
Confidence 001123556667664 688873
No 244
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=76.58 E-value=7.7 Score=36.63 Aligned_cols=71 Identities=10% Similarity=0.025 Sum_probs=49.0
Q ss_pred cCCCCEEEeccccCCcCC----------C----HHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCC
Q psy9602 126 APIIDQMVNGTTGEGVSM----------T----TAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVH 191 (239)
Q Consensus 126 ~gg~glvV~GstGE~~sL----------T----~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAd 191 (239)
.|++++.+.+++.....+ | .+--.++++.+.+.+++ ++|||+.=+=.+.+++.+... +|||
T Consensus 323 aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~-~iPVIg~GGI~s~~DA~e~l~----aGAd 397 (443)
T 1tv5_A 323 TNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-QIPIIASGGIFSGLDALEKIE----AGAS 397 (443)
T ss_dssp TTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTT-CSCEEEESSCCSHHHHHHHHH----TTEE
T ss_pred cCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCC-CCcEEEECCCCCHHHHHHHHH----cCCC
Confidence 355567777777643221 1 12235788888888887 899986555567777777664 7999
Q ss_pred EEEECCCCCC
Q psy9602 192 AVLCLPELFF 201 (239)
Q Consensus 192 aVlV~PP~y~ 201 (239)
+|++..+..+
T Consensus 398 ~Vqigrall~ 407 (443)
T 1tv5_A 398 VCQLYSCLVF 407 (443)
T ss_dssp EEEESHHHHH
T ss_pred EEEEcHHHHh
Confidence 9999988654
No 245
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=76.52 E-value=17 Score=31.48 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=54.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCCc
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMFT 234 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~T 234 (239)
...|++-+...+.+++++.++.+.+.|+|.|=+=--++-...+.+.+.+....+.+.++++||++-.-+..-
T Consensus 19 ~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~e 90 (257)
T 2yr1_A 19 EPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSERE 90 (257)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTT
T ss_pred CcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeeccc
Confidence 445778899999999999999999999999988765543221456777777777777657898876655543
No 246
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=76.45 E-value=20 Score=33.32 Aligned_cols=113 Identities=12% Similarity=0.020 Sum_probs=70.3
Q ss_pred EeehhhHHHHHHHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHHH
Q psy9602 105 IITAGLLLLTCMLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEVV 179 (239)
Q Consensus 105 v~~A~~~~~~~~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eAI 179 (239)
++-| +..+-+.++.-+.....||.+++=-= ..+.-.++..+||...+..+++ .++. +.-..+++++ +.++.+
T Consensus 137 iiKP-lGLs~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~~~eai~ra~~eTGe-~k~y~~NiTa-~~~em~ 213 (378)
T 3qfw_A 137 ALKP-QGLSPAALASIAHQLALGGVDLIKDDHGLADQAFSPFAERAAAVGKAVREANAARGG-RTLYAPNISG-TLDDMR 213 (378)
T ss_dssp EECC-TTSCHHHHHHHHHHHHHTTCSEEEECTTCSSCTTSCHHHHHHHHHHHHHHHHHHHTC-CCEEECBCCS-SHHHHH
T ss_pred eccC-CcCCHHHHHHHHHHHHhcCCCcccCCcCcCCCCcccHHHHHHHHHHHHHHHHHhhCC-ccEEEeecCC-CHHHHH
Confidence 3344 44444455554445566777766211 2234677889999876655443 3443 4445568888 699999
Q ss_pred HHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 180 ELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 180 elar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
+.+++|+++|+.++|+-+-. ... . -...+++..|++||.++
T Consensus 214 ~ra~~a~e~G~~~~mvd~~~-~G~---~----a~~~l~r~~p~~~lh~H 254 (378)
T 3qfw_A 214 RQLGVIRDEGIGAVLVAPMI-VGV---S----NFHAIVKEAAGLVVVAH 254 (378)
T ss_dssp HHHHHHHHHTCCEEEECHHH-HCH---H----HHHHHHTTCTTCEEEEC
T ss_pred HHHHHHHHcCCCEEEEeccc-cCH---H----HHHHHHHhCCCCEEEeC
Confidence 99999999999999997411 121 2 23444556666776655
No 247
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=76.39 E-value=7.5 Score=34.61 Aligned_cols=75 Identities=7% Similarity=0.003 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|++.+ --|. .+ +=.+.++.|.+.+ +
T Consensus 171 ~~~~~~e~v~avr~a~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P~--~~----~~~~~~~~l~~~~-~ 240 (359)
T 1mdl_A 171 ALDQDLAVVRSIRQAVGD-DFGIMVDYNQSLDVPAAIKRSQALQQEGVTWI--EEPT--LQ----HDYEGHQRIQSKL-N 240 (359)
T ss_dssp SHHHHHHHHHHHHHHHCS-SSEEEEECTTCSCHHHHHHHHHHHHHHTCSCE--ECCS--CT----TCHHHHHHHHHTC-S
T ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHHHHHHHhCCCeE--ECCC--Ch----hhHHHHHHHHHhC-C
Confidence 346667889999998876 79999865 46689999999999999998865 3343 22 1256677888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 241 iPI~~d 246 (359)
T 1mdl_A 241 VPVQMG 246 (359)
T ss_dssp SCEEEC
T ss_pred CCEEeC
Confidence 999863
No 248
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=76.38 E-value=23 Score=31.63 Aligned_cols=75 Identities=8% Similarity=0.024 Sum_probs=56.5
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
..++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|++.+ --|. .+ . -.+.++.|.+++ +
T Consensus 182 ~~~~~~e~v~avr~a~g~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P~--~~-~---~~~~~~~l~~~~-~ 251 (382)
T 1rvk_A 182 DVKMDLKACAAVREAVGP-DIRLMIDAFHWYSRTDALALGRGLEKLGFDWI--EEPM--DE-Q---SLSSYKWLSDNL-D 251 (382)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSEEEEECCTTCCHHHHHHHHHHHHTTTCSEE--ECCS--CT-T---CHHHHHHHHHHC-S
T ss_pred chHHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--eCCC--Ch-h---hHHHHHHHHhhC-C
Confidence 456667888999998876 79999865 46689999999999999998864 3443 12 1 255677888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 252 iPIa~d 257 (382)
T 1rvk_A 252 IPVVGP 257 (382)
T ss_dssp SCEEEC
T ss_pred CCEEEe
Confidence 999863
No 249
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=76.34 E-value=5 Score=38.45 Aligned_cols=38 Identities=13% Similarity=0.227 Sum_probs=29.0
Q ss_pred HHHHHHHHhcCCCceEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 151 NLEAWMTEAKTHGFTVMV-QIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 151 li~~vve~~~G~rvpVIa-GVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
.++.+.+.+ ++||++ |+.. .+.++.++++|+|+|.|..
T Consensus 334 ~i~~lr~~~---~~PvivKgv~~------~e~A~~a~~aGad~I~vs~ 372 (511)
T 1kbi_A 334 DIEELKKKT---KLPIVIKGVQR------TEDVIKAAEIGVSGVVLSN 372 (511)
T ss_dssp HHHHHHHHC---SSCEEEEEECS------HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHh---CCcEEEEeCCC------HHHHHHHHHcCCCEEEEcC
Confidence 366677765 469998 5553 5668899999999999965
No 250
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=76.24 E-value=6.2 Score=36.67 Aligned_cols=85 Identities=11% Similarity=-0.025 Sum_probs=55.8
Q ss_pred CCCHHHHHHHHHH----HHHHhc-----CCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC----C--CCCCCH
Q psy9602 142 SMTTAERKLNLEA----WMTEAK-----THGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL----F--FTPASV 206 (239)
Q Consensus 142 sLT~eER~~li~~----vve~~~-----G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~----y--~~~~s~ 206 (239)
....+....+++. +.+.+. + |.--++.+.-.+.+.+++.++.+.+.|+.+|.+.|-+ + ..+ ++
T Consensus 133 ~~d~e~a~~~~r~~Nd~lae~~~~~~P~~-Rf~g~a~v~~~d~~~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l-~d 210 (423)
T 4dzi_A 133 KHDIEATMASVHAFNLWLDEDWGFDRPDH-RIIAAPIVSLADPTRAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSL-GD 210 (423)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCSSCTTC-CEEECCBCCCSSHHHHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCT-TC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhCCCC-cEEEEEeCCccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCC-CC
Confidence 3455555444433 344444 2 3322333333458889999999999999999987521 1 223 67
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 207 EDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 207 e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+.+...|+.+.+. ++||+++--
T Consensus 211 ~~~~pl~~~~~el--g~pV~iH~g 232 (423)
T 4dzi_A 211 RSHDPVWARLAEA--GVPVGFHLS 232 (423)
T ss_dssp GGGHHHHHHHHHH--TCCEEEECC
T ss_pred ccHHHHHHHHHhc--CCeEEEeCC
Confidence 8899999998886 899999854
No 251
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=76.16 E-value=2.6 Score=38.38 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=52.6
Q ss_pred hcCCC-CEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Q psy9602 125 MAPII-DQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTP 203 (239)
Q Consensus 125 ~~gg~-glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~ 203 (239)
.+.|. ++.|.++.|-...-. .--.+++..+.+.+.+ ++|||+.=+=.+..++++... +|||+|++--|.++..
T Consensus 243 ~~~Gad~I~vs~~ggr~~~~~-~~~~~~l~~v~~~~~~-~ipvia~GGI~~~~D~~k~l~----~GAdaV~iGr~~l~~~ 316 (370)
T 1gox_A 243 VQHGAAGIIVSNHGARQLDYV-PATIMALEEVVKAAQG-RIPVFLDGGVRRGTDVFKALA----LGAAGVFIGRPVVFSL 316 (370)
T ss_dssp HHTTCSEEEECCGGGTSSTTC-CCHHHHHHHHHHHTTT-SSCEEEESSCCSHHHHHHHHH----HTCSEEEECHHHHHHH
T ss_pred HHcCCCEEEECCCCCccCCCc-ccHHHHHHHHHHHhCC-CCEEEEECCCCCHHHHHHHHH----cCCCEEeecHHHHHHH
Confidence 44555 455665555311101 1234566667777777 799997555556667666553 6999999999887642
Q ss_pred C--CHHHHHHHHHHHHh
Q psy9602 204 A--SVEDLVDYLRDVGE 218 (239)
Q Consensus 204 ~--s~e~iv~yf~~Vae 218 (239)
. .++++.++++.+.+
T Consensus 317 ~~~G~~gv~~~~~~l~~ 333 (370)
T 1gox_A 317 AAEGEAGVKKVLQMMRD 333 (370)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhccHHHHHHHHHHHHH
Confidence 1 34455555555444
No 252
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=76.15 E-value=7.1 Score=31.96 Aligned_cols=58 Identities=19% Similarity=0.226 Sum_probs=37.6
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHH
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLR 214 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~ 214 (239)
+.++.+.+.. ++||+++-+-.+.+++.++. ++|||++++....+....+.+++.++++
T Consensus 188 ~~i~~l~~~~---~~pvia~GGi~~~~~~~~~~----~~Ga~~v~vgsal~~~~~~~~~~~~~l~ 245 (253)
T 1h5y_A 188 ELIRRVADSV---RIPVIASGGAGRVEHFYEAA----AAGADAVLAASLFHFRVLSIAQVKRYLK 245 (253)
T ss_dssp HHHHHHHHHC---SSCEEEESCCCSHHHHHHHH----HTTCSEEEESHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHHHhc---CCCEEEeCCCCCHHHHHHHH----HcCCcHHHHHHHHHcCCCCHHHHHHHHH
Confidence 4445555543 58999875555556655543 5899999999766544325667777654
No 253
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=76.06 E-value=12 Score=32.90 Aligned_cols=85 Identities=14% Similarity=0.057 Sum_probs=52.7
Q ss_pred hhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC--CC
Q psy9602 124 RMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL--FF 201 (239)
Q Consensus 124 ~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~--y~ 201 (239)
....|.+.+++|.. .|+.++-.++++.+.+. .+.+++.+. +.++ ++.|.++|+|.+-+.+-. .+
T Consensus 131 A~~~GAD~VlLi~a----~l~~~~l~~l~~~a~~l----Gl~~lvev~--t~ee----~~~A~~~Gad~IGv~~r~l~~~ 196 (272)
T 3qja_A 131 ARAHGADMLLLIVA----ALEQSVLVSMLDRTESL----GMTALVEVH--TEQE----ADRALKAGAKVIGVNARDLMTL 196 (272)
T ss_dssp HHHTTCSEEEEEGG----GSCHHHHHHHHHHHHHT----TCEEEEEES--SHHH----HHHHHHHTCSEEEEESBCTTTC
T ss_pred HHHcCCCEEEEecc----cCCHHHHHHHHHHHHHC----CCcEEEEcC--CHHH----HHHHHHCCCCEEEECCCccccc
Confidence 34556666655543 46677877777776652 467777764 3333 455667899999998522 12
Q ss_pred CCCCHHHHHHHHHHHHhhCC-CCcEEE
Q psy9602 202 TPASVEDLVDYLRDVGEAAP-ATPLFY 227 (239)
Q Consensus 202 ~~~s~e~iv~yf~~Vaeatp-dLPIiL 227 (239)
.+ + ++.+..+.+.+| ++|++.
T Consensus 197 ~~-d----l~~~~~l~~~v~~~~pvVa 218 (272)
T 3qja_A 197 DV-D----RDCFARIAPGLPSSVIRIA 218 (272)
T ss_dssp CB-C----TTHHHHHGGGSCTTSEEEE
T ss_pred cc-C----HHHHHHHHHhCcccCEEEE
Confidence 22 2 345678888776 577763
No 254
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=75.68 E-value=17 Score=32.85 Aligned_cols=45 Identities=7% Similarity=-0.186 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
....+.++.+.+... ++||++|... + .+.++.|.++|||+|.|..
T Consensus 146 ~~~~~~i~~lr~~~~--~~~vi~g~v~-t----~e~A~~a~~aGaD~I~v~~ 190 (351)
T 2c6q_A 146 EHFVEFVKDVRKRFP--QHTIMAGNVV-T----GEMVEELILSGADIIKVGI 190 (351)
T ss_dssp HHHHHHHHHHHHHCT--TSEEEEEEEC-S----HHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHHHhcC--CCeEEEEeCC-C----HHHHHHHHHhCCCEEEECC
Confidence 455667777777663 4799986432 2 4667889999999998853
No 255
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=75.68 E-value=13 Score=32.87 Aligned_cols=64 Identities=9% Similarity=0.014 Sum_probs=42.5
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-CHHHHHHHHHHHHhh
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-SVEDLVDYLRDVGEA 219 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-s~e~iv~yf~~Vaea 219 (239)
+++..+.+.++ ++|||+.=+=.+..++++.. .+|||+|++.-|+.+... .++.+.++++.+.+.
T Consensus 245 ~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal----~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~e 309 (332)
T 1vcf_A 245 RAILEVREVLP--HLPLVASGGVYTGTDGAKAL----ALGADLLAVARPLLRPALEGAERVAAWIGDYLEE 309 (332)
T ss_dssp HHHHHHHHHCS--SSCEEEESSCCSHHHHHHHH----HHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcC--CCeEEEECCCCCHHHHHHHH----HhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHH
Confidence 44556666653 58999855555666766544 359999999998874221 566777777666554
No 256
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=75.59 E-value=8.9 Score=32.85 Aligned_cols=69 Identities=9% Similarity=0.055 Sum_probs=49.4
Q ss_pred ceEEEecCC-CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCCC
Q psy9602 164 FTVMVQIGG-TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPMF 233 (239)
Q Consensus 164 vpVIaGVg~-~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~~ 233 (239)
..|++-+.+ .+.++.++.++.+.+.|+|.|=+=--++-.. +.+.+.+-...+.+..+++||++-.-+..
T Consensus 4 p~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~-~~~~v~~~~~~lr~~~~~~PiI~T~R~~~ 73 (238)
T 1sfl_A 4 VEVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENV-TVDQVAEMITKLKVMQDSFKLLVTYRTKL 73 (238)
T ss_dssp CEEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTC-CHHHHHHHHHHHC---CCSEEEEECCBGG
T ss_pred CeEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccccC-CHHHHHHHHHHHHHhccCCCEEEEeeccc
Confidence 357778888 9999999999999999999999887766555 67777777777777665789987655543
No 257
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=75.48 E-value=4.4 Score=36.11 Aligned_cols=58 Identities=16% Similarity=0.095 Sum_probs=39.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.++|+.++.+ .+.++.+.+.|+|++++..+-+-....+..-++.+..+.+.. ++||+.
T Consensus 124 g~~v~~~v~s------~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~-~iPvia 181 (326)
T 3bo9_A 124 GTKVIPVVAS------DSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSV-NIPVIA 181 (326)
T ss_dssp TCEEEEEESS------HHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC-SSCEEE
T ss_pred CCcEEEEcCC------HHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHc-CCCEEE
Confidence 4799988743 456677889999999997754211101112456777888888 899875
No 258
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=75.43 E-value=5.3 Score=33.35 Aligned_cols=58 Identities=16% Similarity=0.212 Sum_probs=38.1
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHH
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLR 214 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~ 214 (239)
++++.+.+.+ ++|||++=+-.+.+++.++. +.|||++++..-.+..+.+.+++.++++
T Consensus 185 ~~~~~l~~~~---~ipvia~GGI~~~~d~~~~~----~~Gadgv~vGsal~~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 185 EMIRFVRPLT---TLPIIASGGAGKMEHFLEAF----LAGADAALAASVFHFREIDVRELKEYLK 242 (253)
T ss_dssp HHHHHHGGGC---CSCEEEESCCCSHHHHHHHH----HTTCSEEEESHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHhc---CCCEEEECCCCCHHHHHHHH----HcCChHHHHHHHHHcCCCCHHHHHHHHH
Confidence 3445555443 58999876655566665544 4799999999765554436677777753
No 259
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=75.32 E-value=21 Score=31.87 Aligned_cols=70 Identities=14% Similarity=0.137 Sum_probs=52.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhC---CCCEEEECC--CCC-----CCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESL---NVHAVLCLP--ELF-----FTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~a---GAdaVlV~P--P~y-----~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
++||+++++..+.++.++.++.+.+. ++|++-|-- |.. +.. .++.+.+..+.+.+.+ +.|+.+---|.
T Consensus 126 ~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~-~~~~~~~i~~~v~~~~-~~pv~vK~~p~ 203 (354)
T 3tjx_A 126 KKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAY-DFDAMRQCLTAVSEVY-PHSFGVKMPPY 203 (354)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTT-SHHHHHHHHHHHHHHC-CSCEEEEECCC
T ss_pred CceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhcc-CHHHHHHHHHHHHHHh-hcccccccCCC
Confidence 68999999999999888888777664 788876532 221 112 5678888999999998 89999988776
Q ss_pred Cc
Q psy9602 233 FT 234 (239)
Q Consensus 233 ~T 234 (239)
.+
T Consensus 204 ~~ 205 (354)
T 3tjx_A 204 FD 205 (354)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 260
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=75.27 E-value=18 Score=34.87 Aligned_cols=109 Identities=16% Similarity=0.104 Sum_probs=63.4
Q ss_pred hhHHhhhcCCCCEEEecccc---CC------cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCC---------------
Q psy9602 119 VGITLRMAPIIDQMVNGTTG---EG------VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTC--------------- 174 (239)
Q Consensus 119 ~~v~~~~~gg~glvV~GstG---E~------~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~S--------------- 174 (239)
..+..+-++|.|+++.+.+. ++ ..|..+|..+-++.+.+.+.....++++++.+.+
T Consensus 41 ~~y~~ra~gg~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~ 120 (671)
T 1ps9_A 41 AFYAERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQILHTGRYSYQPHLVAPSALQ 120 (671)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSTTCSBTTCCBCCSGGGHHHHHHHHHHHHHTTCCEEEEECCCGGGSBSTTCEESSSCC
T ss_pred HHHHHHhcCCCCEEEecccccCccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeccCCcccCCCCCcCCCCcc
Confidence 44555567889987665542 11 2333455544444444433322458888876521
Q ss_pred -------------------HHHHHHHHHHHHhCCCCEEEECC-----------CCCCCCC-----C----HHHHHHHHHH
Q psy9602 175 -------------------FQEVVELAKHAESLNVHAVLCLP-----------ELFFTPA-----S----VEDLVDYLRD 215 (239)
Q Consensus 175 -------------------t~eAIelar~A~~aGAdaVlV~P-----------P~y~~~~-----s----~e~iv~yf~~ 215 (239)
.++-.+-|+.|+++|+|+|-+-. |...+-. + ..-+.+-+++
T Consensus 121 ~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~a 200 (671)
T 1ps9_A 121 APINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRA 200 (671)
T ss_dssp CTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHH
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHH
Confidence 14566788899999999999854 3322110 1 2235666666
Q ss_pred HHhhCC-CCcEEE
Q psy9602 216 VGEAAP-ATPLFY 227 (239)
Q Consensus 216 Vaeatp-dLPIiL 227 (239)
|.++++ +.||.+
T Consensus 201 vr~~vG~~~~v~v 213 (671)
T 1ps9_A 201 VRERVGNDFIIIY 213 (671)
T ss_dssp HHHHHCSSSEEEE
T ss_pred HHHHcCCCceEEE
Confidence 666664 678766
No 261
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=75.09 E-value=8.4 Score=33.90 Aligned_cols=55 Identities=11% Similarity=0.006 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 174 CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 174 St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+.+.++++++...+.|||-+-|---..-.. ..+.+....+.|.+.+ ++||.|--+
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~s~~~e-E~~rv~~vi~~l~~~~-~~pisIDT~ 86 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTGPTADD-PVRVMEWLVKTIQEVV-DLPCCLDST 86 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECCSCSSC-HHHHHHHHHHHHHHHC-CCCEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCcCchh-HHHHHHHHHHHHHHhC-CCeEEEeCC
Confidence 578999999999999999999986442222 4678889999999998 899998543
No 262
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=75.07 E-value=6.6 Score=34.03 Aligned_cols=72 Identities=19% Similarity=0.108 Sum_probs=43.4
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHH-HHHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVE-DLVDY 212 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e-~iv~y 212 (239)
.|.+|....++..+ .++.+.+.. ++||+++-|=.+.++ ++.+.++|||+|+|..-..-.. ++. .+.++
T Consensus 155 ~~~~Gt~~~~~~~~---~l~~i~~~~---~iPviv~gGI~t~ed----a~~~~~~GAdgViVGSAi~~a~-dp~~~~~~l 223 (264)
T 1xm3_A 155 ASPIGSGQGILNPL---NLSFIIEQA---KVPVIVDAGIGSPKD----AAYAMELGADGVLLNTAVSGAD-DPVKMARAM 223 (264)
T ss_dssp SSSTTCCCCCSCHH---HHHHHHHHC---SSCBEEESCCCSHHH----HHHHHHTTCSEEEESHHHHTSS-SHHHHHHHH
T ss_pred CcccCCCCCCCCHH---HHHHHHhcC---CCCEEEEeCCCCHHH----HHHHHHcCCCEEEEcHHHhCCC-CHHHHHHHH
Confidence 55566555554433 555555543 589998766655666 4455678999999997544333 443 34444
Q ss_pred HHHH
Q psy9602 213 LRDV 216 (239)
Q Consensus 213 f~~V 216 (239)
.+.+
T Consensus 224 ~~~v 227 (264)
T 1xm3_A 224 KLAV 227 (264)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 263
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=74.98 E-value=36 Score=28.44 Aligned_cols=62 Identities=8% Similarity=0.063 Sum_probs=42.3
Q ss_pred CceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+..+++- ....+.....+.++...+.++|++++.|... +.+...++.+.+ . ++|++++|.+.
T Consensus 30 g~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~------~~~~~~~~~~~~-~-~iPvV~~~~~~ 92 (313)
T 2h3h_A 30 GVDTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSDP------TAVIPTIKKALE-M-GIPVVTLDTDS 92 (313)
T ss_dssp TCEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSST------TTTHHHHHHHHH-T-TCCEEEESSCC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCh------HHHHHHHHHHHH-C-CCeEEEeCCCC
Confidence 3556553 3466788888888888889999999987532 112234455544 4 79999998753
No 264
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=74.96 E-value=9 Score=31.26 Aligned_cols=73 Identities=10% Similarity=0.076 Sum_probs=44.0
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.++. . + +.. ++.+.+. ++|++++
T Consensus 19 ~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~---~-~-~~~---~~~l~~~--~iPvV~~ 88 (275)
T 3d8u_A 19 AHFLPSFQQALNKAGYQLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSE---H-S-QRT---HQLLEAS--NTPVLEI 88 (275)
T ss_dssp HHHHHHHHHHHHHTSCEECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSC---C-C-HHH---HHHHHHH--TCCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCC---C-C-HHH---HHHHHhC--CCCEEEE
Confidence 344444444433223555555555667777777888888889998888643 1 2 223 3444443 6899888
Q ss_pred eCC
Q psy9602 229 HIP 231 (239)
Q Consensus 229 N~P 231 (239)
|.+
T Consensus 89 ~~~ 91 (275)
T 3d8u_A 89 AEL 91 (275)
T ss_dssp SSS
T ss_pred eec
Confidence 764
No 265
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=74.84 E-value=13 Score=30.83 Aligned_cols=75 Identities=11% Similarity=0.022 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
=..++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|+.. + +.. ++.+. . ++|++
T Consensus 22 ~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~----~-~~~---~~~l~--~-~iPvV 90 (285)
T 3c3k_A 22 FCAAVVKGIEKTAEKNGYRILLCNTESDLARSRSCLTLLSGKMVDGVITMDALS----E-LPE---LQNII--G-AFPWV 90 (285)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGG----G-HHH---HHHHH--T-TSSEE
T ss_pred hHHHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCC----C-hHH---HHHHh--c-CCCEE
Confidence 344455544444332245666655666777777788888888999999986431 2 222 33443 4 79999
Q ss_pred EEeCCC
Q psy9602 227 YYHIPM 232 (239)
Q Consensus 227 LYN~P~ 232 (239)
++|.+.
T Consensus 91 ~~~~~~ 96 (285)
T 3c3k_A 91 QCAEYD 96 (285)
T ss_dssp EESSCC
T ss_pred EEcccc
Confidence 998753
No 266
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=74.79 E-value=17 Score=29.55 Aligned_cols=52 Identities=23% Similarity=0.245 Sum_probs=34.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC-CCcEEE
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP-ATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp-dLPIiL 227 (239)
..++++|+ .+..+ +..+.+.|+|.+++.| ++..-.+.++.+.+..+ ++||+.
T Consensus 101 g~~~~~g~--~t~~e----~~~a~~~G~d~v~v~~-------t~~~g~~~~~~l~~~~~~~ipvia 153 (212)
T 2v82_A 101 GMTVCPGC--ATATE----AFTALEAGAQALKIFP-------SSAFGPQYIKALKAVLPSDIAVFA 153 (212)
T ss_dssp TCEEECEE--CSHHH----HHHHHHTTCSEEEETT-------HHHHCHHHHHHHHTTSCTTCEEEE
T ss_pred CCCEEeec--CCHHH----HHHHHHCCCCEEEEec-------CCCCCHHHHHHHHHhccCCCeEEE
Confidence 36788884 44444 3566789999999843 12223578888888874 488764
No 267
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=74.60 E-value=14 Score=32.91 Aligned_cols=82 Identities=9% Similarity=-0.032 Sum_probs=54.6
Q ss_pred hhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-
Q psy9602 124 RMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT- 202 (239)
Q Consensus 124 ~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~- 202 (239)
..+-|.+++-.+...-... +.++-.++++.....+ ++|.|+-+|+.+.++.++.++.+.++|++++++---.+..
T Consensus 186 a~~lGaD~iKv~~~~~~~g-~~~~~~~vv~~~~~~~---~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~~ 261 (304)
T 1to3_A 186 LGDSGADLYKVEMPLYGKG-ARSDLLTASQRLNGHI---NMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSSV 261 (304)
T ss_dssp HTTSSCSEEEECCGGGGCS-CHHHHHHHHHHHHHTC---CSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGGG
T ss_pred HHHcCCCEEEeCCCcCCCC-CHHHHHHHHHhccccC---CCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCcc
Confidence 3455667663333200001 6777777777644434 4685666666688888999999999999999998766655
Q ss_pred ---CCCHHHHH
Q psy9602 203 ---PASVEDLV 210 (239)
Q Consensus 203 ---~~s~e~iv 210 (239)
+ ++.+..
T Consensus 262 ~~~~-dp~~~~ 271 (304)
T 1to3_A 262 IGLP-DTELML 271 (304)
T ss_dssp TTCS-CHHHHH
T ss_pred ccCC-CHHHHH
Confidence 5 666666
No 268
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=74.55 E-value=17 Score=32.00 Aligned_cols=67 Identities=18% Similarity=0.093 Sum_probs=42.5
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC--CCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF--FTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y--~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
++++.+.+. .+||+..+. + .+.++.+.+.|+|++++..+.. ..........+.+..+.+.+ ++||++
T Consensus 109 ~~~~~l~~~----gi~vi~~v~--t----~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~-~iPvia 177 (328)
T 2gjl_A 109 EHIAEFRRH----GVKVIHKCT--A----VRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL-RVPIIA 177 (328)
T ss_dssp HHHHHHHHT----TCEEEEEES--S----HHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC-CSCEEE
T ss_pred HHHHHHHHc----CCCEEeeCC--C----HHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc-CCCEEE
Confidence 444444442 478887764 3 3456678899999999976432 11000113457788888888 899876
No 269
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=74.42 E-value=14 Score=31.96 Aligned_cols=73 Identities=8% Similarity=0.018 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++.+.+.+...+..+++.....+.+...+..+...+.++|++++.++. . ++ . .++.+.+ . ++|+++
T Consensus 85 ~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~---~-~~-~---~~~~l~~-~-~iPvV~ 154 (355)
T 3e3m_A 85 FAQTAQSLTDVLEQGGLQLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDG---H-TE-Q---TIRLLQR-A-SIPIVE 154 (355)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSC---C-CH-H---HHHHHHH-C-CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCC---C-CH-H---HHHHHHh-C-CCCEEE
Confidence 3445554444443335677777777788888888888888999999998643 1 22 2 3344444 4 799998
Q ss_pred EeC
Q psy9602 228 YHI 230 (239)
Q Consensus 228 YN~ 230 (239)
.+.
T Consensus 155 i~~ 157 (355)
T 3e3m_A 155 IWE 157 (355)
T ss_dssp ESS
T ss_pred ECC
Confidence 853
No 270
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=74.36 E-value=24 Score=31.93 Aligned_cols=74 Identities=8% Similarity=0.025 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
.++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|++.+= -|. .+ +-++.++.|.+.+ ++
T Consensus 177 ~~~~~e~v~avR~a~G~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--qP~--~~----~d~~~~~~l~~~~-~i 246 (391)
T 2qgy_A 177 LSISIQFVEKVREIVGD-ELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIE--EPV--DG----ENISLLTEIKNTF-NM 246 (391)
T ss_dssp HHHHHHHHHHHHHHHCS-SSCEEEECCCCSCHHHHHHHHHHHGGGCCSEEE--CSS--CT----TCHHHHHHHHHHC-SS
T ss_pred HHHHHHHHHHHHHHhCC-CCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEe--CCC--Ch----hhHHHHHHHHhhC-CC
Confidence 46667889999998876 79999865 466899999999999999998653 343 12 1256677888888 79
Q ss_pred cEEEE
Q psy9602 224 PLFYY 228 (239)
Q Consensus 224 PIiLY 228 (239)
||+.-
T Consensus 247 PIa~d 251 (391)
T 2qgy_A 247 KVVTG 251 (391)
T ss_dssp CEEEC
T ss_pred CEEEc
Confidence 99863
No 271
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=74.33 E-value=22 Score=32.18 Aligned_cols=76 Identities=12% Similarity=-0.036 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|++.+ -.|. .+ . -.+.++.|.+.+ +
T Consensus 189 ~~~~~~e~v~avR~avg~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P~--~~-~---~~~~~~~l~~~~-~ 258 (393)
T 2og9_A 189 DGALDIARVTAVRKHLGD-AVPLMVDANQQWDRPTAQRMCRIFEPFNLVWI--EEPL--DA-Y---DHEGHAALALQF-D 258 (393)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE--ECCS--CT-T---CHHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHcCC-CCEEEEECCCCCCHHHHHHHHHHHHhhCCCEE--ECCC--Cc-c---cHHHHHHHHHhC-C
Confidence 356667888999998876 79998855 46689999999999999998865 3443 12 1 255677888888 7
Q ss_pred CcEEEEe
Q psy9602 223 TPLFYYH 229 (239)
Q Consensus 223 LPIiLYN 229 (239)
+||+.-.
T Consensus 259 iPIa~dE 265 (393)
T 2og9_A 259 TPIATGE 265 (393)
T ss_dssp SCEEECT
T ss_pred CCEEeCC
Confidence 9998643
No 272
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=74.33 E-value=6.2 Score=33.23 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCEEEECCCC---CCCCCCHHHHHHHHHHHHh
Q psy9602 171 GGTCFQEVVELAKHAESLNVHAVLCLPEL---FFTPASVEDLVDYLRDVGE 218 (239)
Q Consensus 171 g~~St~eAIelar~A~~aGAdaVlV~PP~---y~~~~s~e~iv~yf~~Vae 218 (239)
+..+.++++++++.|.+.|.+.+.++|-. ++.. +.+.+..||..+-+
T Consensus 19 g~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~-~~~~~~~~~~~l~~ 68 (247)
T 2wje_A 19 GPKSREESKALLAESYRQGVRTIVSTSHRRKGMFET-PEEKIAENFLQVRE 68 (247)
T ss_dssp SCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCC-CHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHH
Confidence 55678899999999999999999988732 2333 67889999988865
No 273
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=73.90 E-value=4.5 Score=33.83 Aligned_cols=51 Identities=16% Similarity=0.218 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 176 QEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.+.+++++.+++.|+|.+.+..+..... ......+..+.+.+.+ ++||++-
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~-~ipvi~~ 80 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQI-DIPFTVG 80 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTTC-CSCEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHhC-CCCEEEe
Confidence 4678888999999999998887653333 3445567778898888 8999884
No 274
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=73.77 E-value=12 Score=34.18 Aligned_cols=75 Identities=15% Similarity=0.003 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecC-CC-CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIG-GT-CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg-~~-St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
+.++=.++++.+.+.++. ++++++-.. +- +.++++++++..++.|.+.+= .|. .+ . . ++.++.|.+++
T Consensus 182 ~~~~d~~~v~avR~a~G~-d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iE--eP~--~~-~--~-~~~~~~l~~~~- 251 (394)
T 3mqt_A 182 SDKEIVAYLRELREVIGW-DMDMMVDCLYRWTDWQKARWTFRQLEDIDLYFIE--ACL--QH-D--D-LIGHQKLAAAI- 251 (394)
T ss_dssp CHHHHHHHHHHHHHHHCS-SSEEEEECTTCCSCHHHHHHHHHHTGGGCCSEEE--SCS--CT-T--C-HHHHHHHHHHS-
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEECCCCCCCHHHHHHHHHHHhhcCCeEEE--CCC--Cc-c--c-HHHHHHHHhhC-
Confidence 567778899999999977 899999664 45 789999999999999988664 343 12 1 1 35678888888
Q ss_pred CCcEEEE
Q psy9602 222 ATPLFYY 228 (239)
Q Consensus 222 dLPIiLY 228 (239)
++||+.-
T Consensus 252 ~iPIa~d 258 (394)
T 3mqt_A 252 NTRLCGA 258 (394)
T ss_dssp SSEEEEC
T ss_pred CCCEEeC
Confidence 7999863
No 275
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=73.71 E-value=3.7 Score=39.31 Aligned_cols=86 Identities=13% Similarity=0.108 Sum_probs=51.4
Q ss_pred CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHh-----cCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Q psy9602 127 PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEA-----KTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF 201 (239)
Q Consensus 127 gg~glvV~GstGE~~sLT~eER~~li~~vve~~-----~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~ 201 (239)
|.++++|.|+.|-...-... ..+++..+.+.+ .+ ++|||+.=+=.+-.++++.. .+|||+|++--|+.+
T Consensus 364 Gad~I~vs~hgG~~~d~~~~-~~~~l~~v~~~v~~~~~~~-~ipVia~GGI~~g~Dv~kaL----alGAdaV~iGr~~l~ 437 (511)
T 1kbi_A 364 GVSGVVLSNHGGRQLDFSRA-PIEVLAETMPILEQRNLKD-KLEVFVDGGVRRGTDVLKAL----CLGAKGVGLGRPFLY 437 (511)
T ss_dssp TCSEEEECCTTTTSSTTCCC-HHHHHHHHHHHHHTTTCBT-TBEEEEESSCCSHHHHHHHH----HHTCSEEEECHHHHH
T ss_pred CCCEEEEcCCCCccCCCCCc-hHHHHHHHHHHHHhhccCC-CcEEEEECCCCCHHHHHHHH----HcCCCEEEECHHHHH
Confidence 44566787776632111111 245566666666 35 79999865666666666544 479999999998865
Q ss_pred CCC--CHHHHHHHHHHHHh
Q psy9602 202 TPA--SVEDLVDYLRDVGE 218 (239)
Q Consensus 202 ~~~--s~e~iv~yf~~Vae 218 (239)
... .++.+.++++.+.+
T Consensus 438 ~~~~~G~~gv~~~l~~l~~ 456 (511)
T 1kbi_A 438 ANSCYGRNGVEKAIEILRD 456 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcChHHHHHHHHHHHH
Confidence 431 34455555544443
No 276
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=73.53 E-value=18 Score=30.69 Aligned_cols=60 Identities=20% Similarity=0.168 Sum_probs=43.8
Q ss_pred HHHHHHHHh--cCCCceEEEecCCCC------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 151 NLEAWMTEA--KTHGFTVMVQIGGTC------FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 151 li~~vve~~--~G~rvpVIaGVg~~S------t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+++...+.. ++ .+|+.+-+.. .....++|+.+++.||.++.+. + .++.+++.+.+ +
T Consensus 6 ~~~~~~~~~~~~~---~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~--------~----~~~i~~ir~~v-~ 69 (229)
T 3q58_A 6 LLARLEQSVHENG---GLIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE--------G----IENLRTVRPHL-S 69 (229)
T ss_dssp HHHHHHHHHHHHC---CEEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE--------S----HHHHHHHGGGC-C
T ss_pred HHHHHHHHhhhcC---CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC--------C----HHHHHHHHHhc-C
Confidence 445555555 55 3555554444 8899999999999999999873 2 35678888888 8
Q ss_pred CcEE
Q psy9602 223 TPLF 226 (239)
Q Consensus 223 LPIi 226 (239)
+||+
T Consensus 70 ~Pvi 73 (229)
T 3q58_A 70 VPII 73 (229)
T ss_dssp SCEE
T ss_pred CCEE
Confidence 9987
No 277
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=73.42 E-value=12 Score=34.03 Aligned_cols=44 Identities=18% Similarity=0.188 Sum_probs=31.4
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMV-QIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIa-GVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
..++.+ .++.+.+.+ ++||++ |+ .+ .+.++.++++|+|+|.|..
T Consensus 214 ~~~~~~----~i~~lr~~~---~~PvivK~v--~~----~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 214 QKISPR----DIEEIAGHS---GLPVFVKGI--QH----PEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp SBCCHH----HHHHHHHHS---SSCEEEEEE--CS----HHHHHHHHHTTCSEEEECC
T ss_pred chhhHH----HHHHHHHHc---CCCEEEEcC--CC----HHHHHHHHHcCCCEEEEcC
Confidence 445643 366666665 469988 55 23 4668899999999999965
No 278
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=73.30 E-value=25 Score=32.52 Aligned_cols=65 Identities=15% Similarity=-0.031 Sum_probs=41.9
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
+.+.++.|.+.++.++++.. .+...++++.+.+... .+||++|-... .+.++.+.++|+|++.+.
T Consensus 238 a~~l~~~G~d~ivi~~a~g~----~~~~~~~i~~l~~~~p--~~pvi~G~v~t-----~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 238 AEALFEAGADAIVIDTAHGH----SAGVLRKIAEIRAHFP--NRTLIAGNIAT-----AEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHTCSEEEECCSCTT----CHHHHHHHHHHHHHCS--SSCEEEEEECS-----HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCeEEEeeecCc----chhHHHHHHHHHHHCC--CCcEeCCCccC-----HHHHHHHHHcCCCEEEEC
Confidence 34455666766555554422 2345667777777763 58999754332 267778889999999886
No 279
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=73.25 E-value=8.8 Score=34.34 Aligned_cols=91 Identities=13% Similarity=0.052 Sum_probs=67.6
Q ss_pred CCCCEEEecc-ccC-------CcCCCHHHHHHHHHHHHHHhcCCCceEEEec---CCCCHHHHHHHHHHHHhCCCCEEEE
Q psy9602 127 PIIDQMVNGT-TGE-------GVSMTTAERKLNLEAWMTEAKTHGFTVMVQI---GGTCFQEVVELAKHAESLNVHAVLC 195 (239)
Q Consensus 127 gg~glvV~Gs-tGE-------~~sLT~eER~~li~~vve~~~G~rvpVIaGV---g~~St~eAIelar~A~~aGAdaVlV 195 (239)
|...+++.|+ .+- ...+|.+|....++.+...+ +.||++-. .+.+..++.+.++...++||++|-+
T Consensus 37 G~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~---~~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 37 GYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVC---SLPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp TCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHC---CSCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhC---CCCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4455666665 221 14689999999999999886 46999955 4558999999999999999999998
Q ss_pred CC----CC---C-CCCC-CHHHHHHHHHHHHhhC
Q psy9602 196 LP----EL---F-FTPA-SVEDLVDYLRDVGEAA 220 (239)
Q Consensus 196 ~P----P~---y-~~~~-s~e~iv~yf~~Vaeat 220 (239)
-- |- . -+.+ ++++..+..+++.++.
T Consensus 114 Ed~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~ 147 (295)
T 1xg4_A 114 EDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAK 147 (295)
T ss_dssp ECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHC
T ss_pred CCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhc
Confidence 53 21 1 1112 7788888888888875
No 280
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=73.07 E-value=14 Score=31.97 Aligned_cols=79 Identities=11% Similarity=0.115 Sum_probs=50.9
Q ss_pred EEEeccccCCcCCCHHHHHHHHHHHHHHhc--CCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC--CCCC-CC
Q psy9602 131 QMVNGTTGEGVSMTTAERKLNLEAWMTEAK--THGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL--FFTP-AS 205 (239)
Q Consensus 131 lvV~GstGE~~sLT~eER~~li~~vve~~~--G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~--y~~~-~s 205 (239)
+++.+.+-++..--. -.++++.+.+.+. + .+|||++=+-.+.+++.++.+.. .|++++|+---. |..+ .+
T Consensus 174 il~t~i~~dG~~~G~--d~eli~~l~~~~~~~~-~iPVIasGGi~s~ed~~~l~~~~--~G~~gvivg~al~l~~g~~~~ 248 (260)
T 2agk_A 174 FLIHAADVEGLCGGI--DELLVSKLFEWTKDYD-DLKIVYAGGAKSVDDLKLVDELS--HGKVDLTFGSSLDIFGGNLVK 248 (260)
T ss_dssp EEEEC-------CCC--CHHHHHHHHHHHTTCS-SCEEEEESCCCCTHHHHHHHHHH--TTCEEEECCTTBGGGTCSSBC
T ss_pred EEEEeeccccCcCCC--CHHHHHHHHHhhcccC-CceEEEeCCCCCHHHHHHHHHhc--CCCCEEEeeCCHHHcCCCCCC
Confidence 555555543332111 2466777777762 2 37999988888888888876653 299999999884 5555 58
Q ss_pred HHHHHHHHH
Q psy9602 206 VEDLVDYLR 214 (239)
Q Consensus 206 ~e~iv~yf~ 214 (239)
-+++.+|.+
T Consensus 249 ~~~~~~~~~ 257 (260)
T 2agk_A 249 FEDCCRWNE 257 (260)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 889988865
No 281
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=73.05 E-value=29 Score=29.78 Aligned_cols=106 Identities=15% Similarity=-0.011 Sum_probs=66.4
Q ss_pred hHHhhhcCCCC-EEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCC
Q psy9602 120 GITLRMAPIID-QMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPE 198 (239)
Q Consensus 120 ~v~~~~~gg~g-lvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP 198 (239)
.++. ++.|.. +=+.-..|..-+=..++-.+-++.+++.+.+..+|||+-.+-.+.++.+..++.|.++|||.|=-..-
T Consensus 72 E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaGADfVKTSTG 150 (226)
T 1vcv_A 72 LVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAGAHFIKSSTG 150 (226)
T ss_dssp HHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECCCS
T ss_pred HHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 4556 666664 31222233222224466677777777777542589999999989999999999999999999998865
Q ss_pred CC----------CCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 199 LF----------FTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 199 ~y----------~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
+. ....+.+++.-+-+.+.+.-+++||-
T Consensus 151 f~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vK 188 (226)
T 1vcv_A 151 FAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVK 188 (226)
T ss_dssp CCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEE
T ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEE
Confidence 44 12226676654443333222235654
No 282
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=72.82 E-value=7.2 Score=36.00 Aligned_cols=91 Identities=15% Similarity=0.208 Sum_probs=65.2
Q ss_pred hcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcC-CCceEEEec----------------CC-------------C
Q psy9602 125 MAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKT-HGFTVMVQI----------------GG-------------T 173 (239)
Q Consensus 125 ~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G-~rvpVIaGV----------------g~-------------~ 173 (239)
-+.|++++ ..+.. +=|...|+...+..+- .+++||+=. ++ .
T Consensus 169 A~AGAdiVAPSdMM--------DGrV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpa 240 (342)
T 1h7n_A 169 AKAGAHCVAPSDMI--------DGRIRDIKRGLINANLAHKTFVLSYAAKFSGNLYGPFRDAACSAPSNGDRKCYQLPPA 240 (342)
T ss_dssp HHHTCSEEEECCCC--------TTHHHHHHHHHHHTTCTTTCEEEEEEEEBCSSCCHHHHHHHTCCCSSSCSTTTSBCTT
T ss_pred HHcCCCeeeccccc--------ccHHHHHHHHHHHCCCccCceEeechHHHhHHhhHHHHHHHhcCCCCCCccccCCCCC
Confidence 45566655 44433 5688888888887653 368888622 11 2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 174 CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 174 St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+.++|++.+..=.+-|||-|||=|-..| ++-.+.+.+.+|++|+..||..
T Consensus 241 N~~EAlre~~~Di~EGAD~vMVKPal~Y--------LDIi~~vk~~~p~~P~aaYqVS 290 (342)
T 1h7n_A 241 GRGLARRALERDMSEGADGIIVKPSTFY--------LDIMRDASEICKDLPICAYHVS 290 (342)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESSGGG--------HHHHHHHHHHTTTSCEEEEECH
T ss_pred CHHHHHHHHHhhHHhCCCeEEEecCccH--------HHHHHHHHHhccCCCeEEEEcC
Confidence 3789999988888889999999985433 4556678888889999999964
No 283
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=72.80 E-value=8.2 Score=31.50 Aligned_cols=57 Identities=11% Similarity=0.061 Sum_probs=45.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.||+..+.+.+.++.++.++.+.+.|++.+.+-.+. + +. .+..+.+++.. +.|+++
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~---~-~~---~~~i~~i~~~~-~~~l~v 62 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNS---P-QW---EQSIPAIVDAY-GDKALI 62 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTS---T-TH---HHHHHHHHHHH-TTTSEE
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCC---h-hH---HHHHHHHHHhC-CCCeEE
Confidence 5789999999999999999999999999999886542 2 22 34556677766 678777
No 284
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=72.78 E-value=20 Score=30.97 Aligned_cols=73 Identities=12% Similarity=0.207 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|+.. + +. .++.+.+ . ++|++++
T Consensus 82 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~----~-~~---~~~~l~~-~-~iPvV~i 151 (348)
T 3bil_A 82 AAMVTEIQSTASKAGLATIITNSNEDATTMSGSLEFLTSHGVDGIICVPNEE----C-AN---QLEDLQK-Q-GMPVVLV 151 (348)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECTTCHHHHHHHHHHHHHTTCSCEEECCCGG----G-HH---HHHHHHH-C--CCEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCC----C-hH---HHHHHHh-C-CCCEEEE
Confidence 3444444433322234555555566777777777888888999999886431 2 22 2344433 4 7899998
Q ss_pred eCC
Q psy9602 229 HIP 231 (239)
Q Consensus 229 N~P 231 (239)
|.+
T Consensus 152 ~~~ 154 (348)
T 3bil_A 152 DRE 154 (348)
T ss_dssp SSC
T ss_pred ccc
Confidence 875
No 285
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=72.39 E-value=15 Score=32.95 Aligned_cols=72 Identities=14% Similarity=0.109 Sum_probs=55.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|+ ++-.|.. -++.++.|.+.+ +
T Consensus 171 ~~~~~~e~v~avr~a~g~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i---~iE~P~~--------~~~~~~~l~~~~-~ 237 (379)
T 2rdx_A 171 DWQSDIDRIRACLPLLEP-GEKAMADANQGWRVDNAIRLARATRDLDY---ILEQPCR--------SYEECQQVRRVA-D 237 (379)
T ss_dssp CHHHHHHHHHHHGGGSCT-TCEEEEECTTCSCHHHHHHHHHHTTTSCC---EEECCSS--------SHHHHHHHHTTC-C
T ss_pred CHHHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHHhCCe---EEeCCcC--------CHHHHHHHHhhC-C
Confidence 456677889999988876 79998865 46689999999999999987 3444542 256778888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.=
T Consensus 238 iPI~~d 243 (379)
T 2rdx_A 238 QPMKLD 243 (379)
T ss_dssp SCEEEC
T ss_pred CCEEEe
Confidence 999863
No 286
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=72.25 E-value=12 Score=36.32 Aligned_cols=109 Identities=7% Similarity=-0.016 Sum_probs=65.1
Q ss_pred hhhcCCCCEEEecccc--------C--CcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCC------------------
Q psy9602 123 LRMAPIIDQMVNGTTG--------E--GVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTC------------------ 174 (239)
Q Consensus 123 ~~~~gg~glvV~GstG--------E--~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~S------------------ 174 (239)
.+-.+|.|+++.+.+. . ...|..+|...-++.+++.+.....++++++.+.+
T Consensus 52 ~~a~gG~gliite~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vh~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~ 131 (690)
T 3k30_A 52 IKAEGGWSAVCTEQVEIHATSDIAPFIELRIWDDQDLPALKRIADAIHEGGGLAGIELAHNGMNAPNQLSRETPLGPGHL 131 (690)
T ss_dssp HHHHTTCSEEEEEEEECSGGGCCTTSCCEECSSGGGHHHHHHHHHHHHHTTCEEEEEEECCGGGCCCTTTCCCCEESSSC
T ss_pred HHhccCCEEEEecceEeccccccCCCcCCccCCHHHHHHHHHHHHHHHhcCCEEEEEccCCcccccccccCCCccCCCCC
Confidence 3456888887665443 1 12566667666666666655432467888776310
Q ss_pred -----------------------HHHHHHHHHHHHhCCCCEEEECCCCCC------------CCC-----CHH----HHH
Q psy9602 175 -----------------------FQEVVELAKHAESLNVHAVLCLPELFF------------TPA-----SVE----DLV 210 (239)
Q Consensus 175 -----------------------t~eAIelar~A~~aGAdaVlV~PP~y~------------~~~-----s~e----~iv 210 (239)
.++-.+-|+.|+++|+|+|-|..-+.| +-. +.+ -+.
T Consensus 132 ~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ 211 (690)
T 3k30_A 132 PVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLR 211 (690)
T ss_dssp BSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHH
T ss_pred cccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHH
Confidence 355667888899999999999543333 110 334 344
Q ss_pred HHHHHHHhhCC-CCcEEEEeCC
Q psy9602 211 DYLRDVGEAAP-ATPLFYYHIP 231 (239)
Q Consensus 211 ~yf~~Vaeatp-dLPIiLYN~P 231 (239)
+-.++|.++++ +.||.+==.|
T Consensus 212 ei~~avr~~~g~~~~v~~r~s~ 233 (690)
T 3k30_A 212 ELLEDTLDECAGRAAVACRITV 233 (690)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEC
T ss_pred HHHHHHHHHhCCCceEEEEECc
Confidence 55555655553 5677765444
No 287
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=72.22 E-value=4.3 Score=35.75 Aligned_cols=57 Identities=12% Similarity=0.016 Sum_probs=36.9
Q ss_pred EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 133 VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 133 V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
+.|.||.-..+. ++-.++++.+.+.. ++||++|.|=.+.+++ +.+.+.|||+++|-.
T Consensus 180 ~~GvTG~~~~~~-~~~~~~v~~vr~~~---~~pv~vGfGI~~~e~~----~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 180 RAGVTGTESKAG-EPIENILTQLAEFN---APPPLLGFGIAEPEQV----RAAIKAGAAGAISGS 236 (267)
T ss_dssp CCCCC---------CHHHHHHHHHTTT---CCCEEECSSCCSHHHH----HHHHHTTCSEEEECH
T ss_pred cCCCCCCccCCc-HHHHHHHHHHHHhc---CCCEEEECCcCCHHHH----HHHHHcCCCEEEECH
Confidence 589999876664 34566777776654 5799999988766654 445668999999985
No 288
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=72.21 E-value=10 Score=34.42 Aligned_cols=75 Identities=12% Similarity=0.156 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-. ++.+.++++++++..++.|.+.+ --|. .+ +-++.++.|.+.+ +
T Consensus 171 ~~~~~~e~v~avR~a~g~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~----~~~~~~~~l~~~~-~ 240 (397)
T 2qde_A 171 PLKADIAMVAEVRRAVGD-DVDLFIDINGAWTYDQALTTIRALEKYNLSKI--EQPL--PA----WDLDGMARLRGKV-A 240 (397)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE--ECCS--CT----TCHHHHHHHHTTC-S
T ss_pred CHHHHHHHHHHHHHhhCC-CCEEEEECCCCCCHHHHHHHHHHHHhCCCCEE--ECCC--Ch----hhHHHHHHHHhhC-C
Confidence 456667888999998876 79998855 46689999999999999998854 3342 12 1256778888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 241 iPIa~d 246 (397)
T 2qde_A 241 TPIYAD 246 (397)
T ss_dssp SCEEES
T ss_pred CCEEEe
Confidence 998863
No 289
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=72.20 E-value=9.9 Score=34.49 Aligned_cols=73 Identities=11% Similarity=0.086 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++-+ +..+.++++++++..++.|.+.+= -|. .+ +-.+.++.|.+.+ ++|
T Consensus 199 ~~~~e~v~avR~a~G~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--~P~--~~----~~~~~~~~l~~~~-~iP 268 (407)
T 2o56_A 199 RLGYDRMAAIRDAVGP-DVDIIAEMHAFTDTTSAIQFGRMIEELGIFYYE--EPV--MP----LNPAQMKQVADKV-NIP 268 (407)
T ss_dssp HHHHHHHHHHHHHHCT-TSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE--CSS--CS----SSHHHHHHHHHHC-CSC
T ss_pred HHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEe--CCC--Ch----hhHHHHHHHHHhC-CCC
Confidence 4446778888888876 89999865 466899999999999999988543 332 12 1256678888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 269 Ia~d 272 (407)
T 2o56_A 269 LAAG 272 (407)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9863
No 290
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=72.13 E-value=7.7 Score=32.40 Aligned_cols=82 Identities=13% Similarity=0.010 Sum_probs=52.2
Q ss_pred hcCCCC-EEEeccc--cCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHH-HhCC-CCEEEECCCC
Q psy9602 125 MAPIID-QMVNGTT--GEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHA-ESLN-VHAVLCLPEL 199 (239)
Q Consensus 125 ~~gg~g-lvV~Gst--GE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A-~~aG-AdaVlV~PP~ 199 (239)
.+.+.+ +++.+.+ |.....+ .++++.+.+.+ ++|||++-+-.+.+++.++.+.. +..| ||++++.--.
T Consensus 154 ~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~---~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal 226 (241)
T 1qo2_A 154 KEYGLEEIVHTEIEKDGTLQEHD----FSLTKKIAIEA---EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAF 226 (241)
T ss_dssp HTTTCCEEEEEETTHHHHTCCCC----HHHHHHHHHHH---TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHH
T ss_pred HhCCCCEEEEEeecccccCCcCC----HHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHH
Confidence 345666 4555533 2222233 55666666665 58999987766677777765542 1338 9999999876
Q ss_pred CCCCCCHHHHHHHH
Q psy9602 200 FFTPASVEDLVDYL 213 (239)
Q Consensus 200 y~~~~s~e~iv~yf 213 (239)
+..+.+.+++.+|+
T Consensus 227 ~~~~~~~~~~~~~~ 240 (241)
T 1qo2_A 227 LEGILTVEVMKRYA 240 (241)
T ss_dssp HTTSSCHHHHHHHH
T ss_pred HcCCCCHHHHHHHh
Confidence 65555778887765
No 291
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=72.12 E-value=11 Score=32.33 Aligned_cols=80 Identities=10% Similarity=0.081 Sum_probs=52.6
Q ss_pred HHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCc------eEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Q psy9602 121 ITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGF------TVMVQIGGTCFQEVVELAKHAESLNVHAVL 194 (239)
Q Consensus 121 v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rv------pVIaGVg~~St~eAIelar~A~~aGAdaVl 194 (239)
++..++.|..++|. +.++. ++++.+.+. ++ |+|.|+.. .. .+..|.++|+|.+=
T Consensus 78 a~~ai~AGA~fivs------P~~~~----evi~~~~~~----~v~~~~~~~~~PG~~T--pt----E~~~A~~~Gad~vK 137 (217)
T 3lab_A 78 FQKAIDAGAQFIVS------PGLTP----ELIEKAKQV----KLDGQWQGVFLPGVAT--AS----EVMIAAQAGITQLK 137 (217)
T ss_dssp HHHHHHHTCSEEEE------SSCCH----HHHHHHHHH----HHHCSCCCEEEEEECS--HH----HHHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEEEe------CCCcH----HHHHHHHHc----CCCccCCCeEeCCCCC--HH----HHHHHHHcCCCEEE
Confidence 34456677776543 22333 456666553 46 99999954 33 45568999999998
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 195 CLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 195 V~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
+.|-.... =.+|.+++..-.|++|++
T Consensus 138 ~FPa~~~g------G~~~lkal~~p~p~i~~~ 163 (217)
T 3lab_A 138 CFPASAIG------GAKLLKAWSGPFPDIQFC 163 (217)
T ss_dssp ETTTTTTT------HHHHHHHHHTTCTTCEEE
T ss_pred ECcccccc------CHHHHHHHHhhhcCceEE
Confidence 87532111 158999999888888887
No 292
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=72.10 E-value=27 Score=31.45 Aligned_cols=76 Identities=14% Similarity=0.053 Sum_probs=57.0
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-+ ++-+.++++++++..++.|.+.+ --|.. + +-++.++.|.+.+ +
T Consensus 192 ~~~~~~e~v~avr~a~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~~--~----~d~~~~~~l~~~~-~ 261 (392)
T 1tzz_A 192 PIEEDRMRIEAVLEEIGK-DAQLAVDANGRFNLETGIAYAKMLRDYPLFWY--EEVGD--P----LDYALQAALAEFY-P 261 (392)
T ss_dssp CHHHHHHHHHHHHHHHTT-TCEEEEECTTCCCHHHHHHHHHHHTTSCCSEE--ECCSC--T----TCHHHHHHHTTTC-C
T ss_pred CHHHHHHHHHHHHHhcCC-CCeEEEECCCCCCHHHHHHHHHHHHHcCCCee--cCCCC--h----hhHHHHHHHHhhC-C
Confidence 356667889999998876 79999865 46689999999999999998854 34431 2 1256678888888 7
Q ss_pred CcEEEEe
Q psy9602 223 TPLFYYH 229 (239)
Q Consensus 223 LPIiLYN 229 (239)
+||+.-.
T Consensus 262 iPIa~dE 268 (392)
T 1tzz_A 262 GPMATGE 268 (392)
T ss_dssp SCEEECT
T ss_pred CCEEECC
Confidence 9998643
No 293
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=72.09 E-value=25 Score=32.39 Aligned_cols=72 Identities=13% Similarity=-0.011 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
+=.++++.+.+.++. ++++++-. ++-+.++++++++..++.|.+.+= -|.. + .+ ++.++.|.+.+ ++||
T Consensus 212 ~d~e~v~avR~a~G~-d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--qP~~--~-~d---~~~~~~l~~~~-~iPI 281 (425)
T 3vcn_A 212 SVPKLFERAREVLGW-DVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE--DSVP--A-EN---QAGFRLIRQHT-TTPL 281 (425)
T ss_dssp TTHHHHHHHHHHHCS-SSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE--CCSC--C-SS---TTHHHHHHHHC-CSCE
T ss_pred HHHHHHHHHHHHcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--CCCC--h-hh---HHHHHHHHhcC-CCCE
Confidence 336778888888877 89999966 467899999999999999988764 2321 1 11 23477888888 7999
Q ss_pred EEE
Q psy9602 226 FYY 228 (239)
Q Consensus 226 iLY 228 (239)
+.=
T Consensus 282 a~d 284 (425)
T 3vcn_A 282 AVG 284 (425)
T ss_dssp EEC
T ss_pred EeC
Confidence 864
No 294
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=72.08 E-value=23 Score=32.03 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++-+ +..+.++++++++..++.|++. +--|. .+ . -++.++.|.+.+ ++|
T Consensus 202 ~~~~e~v~avR~a~G~-d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~--iE~P~--~~-~---~~~~~~~l~~~~-~iP 271 (410)
T 2gl5_A 202 KMGEARIAAMREAMGD-DADIIVEIHSLLGTNSAIQFAKAIEKYRIFL--YEEPI--HP-L---NSDNMQKVSRST-TIP 271 (410)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTCSCHHHHHHHHHHHGGGCEEE--EECSS--CS-S---CHHHHHHHHHHC-SSC
T ss_pred HHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCe--EECCC--Ch-h---hHHHHHHHHhhC-CCC
Confidence 4456788888888876 89999865 4668999999999999988664 34443 12 1 256678888888 799
Q ss_pred EEEEe
Q psy9602 225 LFYYH 229 (239)
Q Consensus 225 IiLYN 229 (239)
|+.-.
T Consensus 272 Ia~dE 276 (410)
T 2gl5_A 272 IATGE 276 (410)
T ss_dssp EEECT
T ss_pred EEecC
Confidence 98643
No 295
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=72.00 E-value=7.6 Score=35.52 Aligned_cols=55 Identities=15% Similarity=0.135 Sum_probs=42.8
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC--CEEEECCC
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV--HAVLCLPE 198 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA--daVlV~PP 198 (239)
...|.+|-.+-++.+++.+ .+|+|+=.++.+.++.++..+.|.++|| .+|++-=-
T Consensus 226 ~~y~~~ea~~~f~~~~~a~---~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv~~GRn 282 (332)
T 3iv3_A 226 VVYSKEEAAQAFREQEAST---DLPYIYLSAGVSAELFQETLVFAHKAGAKFNGVLCGRA 282 (332)
T ss_dssp CCBCHHHHHHHHHHHHHTC---SSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEEEECHH
T ss_pred ccccHHHHHHHHHHHHhcC---CCCEEEECCCCCHHHHHHHHHHHHHcCCCcceEEeeHH
Confidence 4568888877777777664 5897753333478999999999999999 99998643
No 296
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=71.98 E-value=25 Score=31.29 Aligned_cols=75 Identities=16% Similarity=0.091 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-. ++.+.++++++++..++.|++.+ --|. .+ . =++.++.|.+.+ +
T Consensus 170 ~~~~~~e~v~avr~a~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~-~---~~~~~~~l~~~~-~ 239 (370)
T 1nu5_A 170 TPAQDLEHIRSIVKAVGD-RASVRVDVNQGWDEQTASIWIPRLEEAGVELV--EQPV--PR-A---NFGALRRLTEQN-G 239 (370)
T ss_dssp CHHHHHHHHHHHHHHHGG-GCEEEEECTTCCCHHHHHHHHHHHHHHTCCEE--ECCS--CT-T---CHHHHHHHHHHC-S
T ss_pred ChHHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCcceE--eCCC--Cc-c---cHHHHHHHHHhC-C
Confidence 345667888888888876 78988855 46689999999999999998854 3443 22 1 245677888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 240 ipIa~d 245 (370)
T 1nu5_A 240 VAILAD 245 (370)
T ss_dssp SEEEES
T ss_pred CCEEeC
Confidence 998863
No 297
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=71.89 E-value=6 Score=36.40 Aligned_cols=58 Identities=12% Similarity=0.071 Sum_probs=38.7
Q ss_pred HHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC--CHHHHHHHHHHHHhh
Q psy9602 157 TEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA--SVEDLVDYLRDVGEA 219 (239)
Q Consensus 157 e~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~--s~e~iv~yf~~Vaea 219 (239)
..+.+ ++|||+.=+=.+-.++++. ..+|||+|++..|+.+... ..+.+.++++.+.+.
T Consensus 273 ~~~~~-~ipvia~GGI~~g~Dv~Ka----LalGAdaV~ig~~~l~a~~~~G~~~v~~~l~~l~~e 332 (365)
T 3sr7_A 273 QPLMD-KVEILASGGIRHPLDIIKA----LVLGAKAVGLSRTMLELVEQHSVHEVIAIVNGWKED 332 (365)
T ss_dssp GGGTT-TSEEEECSSCCSHHHHHHH----HHHTCSEEEESHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHhcC-CCeEEEeCCCCCHHHHHHH----HHcCCCEEEECHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 34455 7999985555666666653 3479999999998865320 456666676666543
No 298
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=71.82 E-value=6.8 Score=36.04 Aligned_cols=141 Identities=11% Similarity=0.089 Sum_probs=78.0
Q ss_pred HHhhhhhcccccccc---ccCCCCCccccceEEEeehhh---HHHHHHHHhhHHhhhcCCCCEE-EeccccCCcCCCHHH
Q psy9602 75 KRRRKRLRNAHGEVV---MIDPSDLPKRAKWTIIITAGL---LLLTCMLLVGITLRMAPIIDQM-VNGTTGEGVSMTTAE 147 (239)
Q Consensus 75 ~~~~~~~~~~~p~~~---~iD~~~l~~~~~W~iv~~A~~---~~~~~~l~~~v~~~~~gg~glv-V~GstGE~~sLT~eE 147 (239)
+|-+++|++.+|+-. .+=.+.....+-+.++-.-.. -..++.|+.-...+-+.|++++ ..+.. +=
T Consensus 102 ~~air~iK~~~pdl~vitDvcLc~YT~HGHcGil~~~g~v~ND~Tl~~La~~Als~A~AGAdiVAPSdMM--------DG 173 (330)
T 1pv8_A 102 IEAIHLLRKTFPNLLVACDVCLCPYTSHGHCGLLSENGAFRAEESRQRLAEVALAYAKAGCQVVAPSDMM--------DG 173 (330)
T ss_dssp HHHHHHHHHHSTTSEEEEEECCC---------------CHHHHHHHHHHHHHHHHHHHHTCSEEEECC----------CC
T ss_pred HHHHHHHHHHCCCeEEEEeeecccccCCCceeEECCCCcCccHHHHHHHHHHHHHHHHcCCCeeeccccc--------cc
Confidence 355677777778422 222334455555555421110 1133344332222345566655 33332 55
Q ss_pred HHHHHHHHHHHhcCCC-ceEEEec-----------------C------------CCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 148 RKLNLEAWMTEAKTHG-FTVMVQI-----------------G------------GTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 148 R~~li~~vve~~~G~r-vpVIaGV-----------------g------------~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
|...|+...+..+-.+ ++||+=. . -.+.++|+..+..=.+-|||-+||=|
T Consensus 174 rV~aIR~aLd~~G~~~~v~ImsYsaKyASafYGPFRdAa~Sap~~GDRktYQmdpaN~~EAlre~~~Di~EGAD~vMVKP 253 (330)
T 1pv8_A 174 RVEAIKEALMAHGLGNRVSVMSYSAKFASCFYGPFRDAAKSSPAFGDRRCYQLPPGARGLALRAVDRDVREGADMLMVKP 253 (330)
T ss_dssp HHHHHHHHHHHTTCTTTCEEBCCCEECCCGGGHHHHHCC-------------CCTTCHHHHHHHHHHHHHTTCSBEEEES
T ss_pred HHHHHHHHHHhCCCcCCceEeehhHHHhHhhhhHHHHHHhcCCCCCCccccCCCCCCHHHHHHHHHhhHHhCCceEEEec
Confidence 7888888888764323 7877411 1 12468899988888888999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 198 ELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 198 P~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
-..| ++-.+.+.+.+|++|+..||..
T Consensus 254 al~Y--------LDIi~~vk~~~p~~P~aaYqVS 279 (330)
T 1pv8_A 254 GMPY--------LDIVREVKDKHPDLPLAVYHVS 279 (330)
T ss_dssp CGGG--------HHHHHHHHHHSTTSCEEEEECH
T ss_pred CccH--------HHHHHHHHHhcCCCCeEEEEcC
Confidence 5433 4556688888889999999964
No 299
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=71.79 E-value=28 Score=32.43 Aligned_cols=98 Identities=11% Similarity=0.004 Sum_probs=63.0
Q ss_pred hHHhhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC-----CHHHHHHHHHHHHhCCCCEEE
Q psy9602 120 GITLRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT-----CFQEVVELAKHAESLNVHAVL 194 (239)
Q Consensus 120 ~v~~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~-----St~eAIelar~A~~aGAdaVl 194 (239)
-++..+++|++++++=|. .+.+|=+.+++.+.+ . .+||++.++-. +-....+.+..+.++|+++|.
T Consensus 144 qi~~L~~~GvDlll~ETi-----~~~~Eakaa~~a~~~-~---~lPv~iS~T~~~~G~l~G~~~~~~~~~l~~~~~~avG 214 (406)
T 1lt8_A 144 QLEVFMKKNVDFLIAEYF-----EHVEEAVWAVETLIA-S---GKPVAATMAIGPEGDLHGVPPGEAAVRLVKAGASIIG 214 (406)
T ss_dssp HHHHHHHHTCSEEEECCC-----SCHHHHHHHHHHHGG-G---TSCEEEEECCBTTBCTTCCCHHHHHHHHHTTTCSEEE
T ss_pred HHHHHhhCCCCEEEEccc-----CCHHHHHHHHHHHHH-h---CCcEEEEEEECCCCCcCCCcHHHHHHHhhcCCCCEEE
Confidence 344456888888877543 345777777655543 2 47999976541 111233444555667899888
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHhhC----CCCcEEEEeCC
Q psy9602 195 CLPELFFTPASVEDLVDYLRDVGEAA----PATPLFYYHIP 231 (239)
Q Consensus 195 V~PP~y~~~~s~e~iv~yf~~Vaeat----pdLPIiLYN~P 231 (239)
+-= .. .++.+..+.+.+.+.+ .+.||++|-|-
T Consensus 215 vNC--~~---gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNa 250 (406)
T 1lt8_A 215 VNC--HF---DPTISLKTVKLMKEGLEAAQLKAHLMSQPLA 250 (406)
T ss_dssp EES--SS---CHHHHHHHHHHHHHHHHTTTCCCEEEEECCS
T ss_pred ecC--CC---CHHHHHHHHHHHHHhhhhcCCCccEEEecCC
Confidence 762 11 4688999998888652 16899999885
No 300
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=71.71 E-value=33 Score=31.59 Aligned_cols=73 Identities=12% Similarity=0.022 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|.. + .+ ++.++.|.+.+ ++|
T Consensus 210 ~~d~e~v~avR~avG~-d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--qP~~--~-~d---~~~~~~l~~~~-~iP 279 (424)
T 3v3w_A 210 NYIPDVFAAVRKEFGP-DIHLLHDVHHRLTPIEAARLGKALEPYHLFWME--DAVP--A-EN---QESFKLIRQHT-TTP 279 (424)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE--CCSC--C-SS---TTHHHHHHHHC-CSC
T ss_pred HHHHHHHHHHHHHcCC-CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE--CCCC--h-Hh---HHHHHHHHhhC-CCC
Confidence 4557788899999877 89999955 577899999999999999988764 2321 1 11 24577888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 280 Ia~d 283 (424)
T 3v3w_A 280 LAVG 283 (424)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9863
No 301
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=71.64 E-value=24 Score=33.79 Aligned_cols=91 Identities=14% Similarity=0.114 Sum_probs=60.1
Q ss_pred EEeccccCCcCCCHHHHHHHHHHHHHHhcC---CCceEEEecCCCCHHHHHHHHHHH-HhCCCCEEEECCCCCCCCCCHH
Q psy9602 132 MVNGTTGEGVSMTTAERKLNLEAWMTEAKT---HGFTVMVQIGGTCFQEVVELAKHA-ESLNVHAVLCLPELFFTPASVE 207 (239)
Q Consensus 132 vV~GstGE~~sLT~eER~~li~~vve~~~G---~rvpVIaGVg~~St~eAIelar~A-~~aGAdaVlV~PP~y~~~~s~e 207 (239)
||.||-..+-.=+.++-.+-.+.+++..+. ..++|+..=.-.+.+++.+.++.+ .+..+|+|++.-+-|... .
T Consensus 11 ~~~gsq~lyg~~~~~~v~~~~~~~~~~l~~~~~l~~~vv~~g~v~t~~~~~~~~~~~n~~~~vdgvi~~~~TFs~a---~ 87 (500)
T 4f2d_A 11 FVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPA---K 87 (500)
T ss_dssp EEEBCCSSSCTTHHHHHHHHHHHHHHHHHHHTCCSSEEEECCCBCSHHHHHHHHHHHHHCTTEEEEEEECCSCCCT---H
T ss_pred EEeccccccCHHHHHHHHHHHHHHHHHhccccCCCeEEEecCcCCCHHHHHHHHHHhccccCCcEEEEeCCcCccH---H
Confidence 366777766666666555545555554432 124566655566778888999999 788999999998776443 3
Q ss_pred HHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 208 DLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 208 ~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
..+ .+++.. +.||++++.
T Consensus 88 ~~i----~~l~~l-~~PvL~~~~ 105 (500)
T 4f2d_A 88 MWI----NGLTML-NKPLLQFHT 105 (500)
T ss_dssp HHH----HHHHHC-CSCEEEEEC
T ss_pred HHH----HHHHhc-CCCEEEEeC
Confidence 333 334457 799999764
No 302
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=71.51 E-value=5.9 Score=34.21 Aligned_cols=79 Identities=22% Similarity=0.251 Sum_probs=47.6
Q ss_pred EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC---CCCCHHHH
Q psy9602 133 VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF---TPASVEDL 209 (239)
Q Consensus 133 V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~---~~~s~e~i 209 (239)
+.|.||....++.++-.++++.+.+.+ ++||++|.|-.+.+++.++ ..|||+++|-.-.+- .. ..+.+
T Consensus 179 ~~g~TG~~~~~~~~~~~~~v~~vr~~~---~~pv~vG~GI~t~e~~~~~-----~~gADgvIVGSai~~~~~~~-~~~~~ 249 (262)
T 2ekc_A 179 VTGTTGAREKLPYERIKKKVEEYRELC---DKPVVVGFGVSKKEHAREI-----GSFADGVVVGSALVKLAGQK-KIEDL 249 (262)
T ss_dssp SCC---------CHHHHHHHHHHHHHC---CSCEEEESSCCSHHHHHHH-----HTTSSEEEECHHHHHHHHTT-CHHHH
T ss_pred cCCccCCCCCcCcccHHHHHHHHHhhc---CCCEEEeCCCCCHHHHHHH-----HcCCCEEEECHHHHhhhhhh-hHHHH
Confidence 448889887666355667778887765 4799999988777766552 457999999853321 11 35678
Q ss_pred HHHHHHHHhhC
Q psy9602 210 VDYLRDVGEAA 220 (239)
Q Consensus 210 v~yf~~Vaeat 220 (239)
.+|.+.+.++.
T Consensus 250 ~~~~~~~~~~~ 260 (262)
T 2ekc_A 250 GNLVKELKEGL 260 (262)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHHh
Confidence 88888776543
No 303
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=71.40 E-value=8.7 Score=39.39 Aligned_cols=80 Identities=10% Similarity=0.040 Sum_probs=53.5
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC---------------C----CC----
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP---------------E----LF---- 200 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P---------------P----~y---- 200 (239)
..+--.++++.+.+.+ ++||++=+.. +..+..+.++.++++|+|++.+.. | +.
T Consensus 687 ~~~~~~~iv~~v~~~~---~~Pv~vK~~~-~~~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~ 762 (1025)
T 1gte_A 687 DPELVRNICRWVRQAV---QIPFFAKLTP-NVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTY 762 (1025)
T ss_dssp CHHHHHHHHHHHHHHC---SSCEEEEECS-CSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCC
T ss_pred CHHHHHHHHHHHHHhh---CCceEEEeCC-ChHHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccC
Confidence 4555667777777665 4799986644 444688999999999999999942 1 00
Q ss_pred --C-CCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 201 --F-TPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 201 --~-~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+ .+....-..++...|.++.|++|||.
T Consensus 763 gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~ 792 (1025)
T 1gte_A 763 GGVSGTAIRPIALRAVTTIARALPGFPILA 792 (1025)
T ss_dssp EEEESGGGHHHHHHHHHHHHHHSTTCCEEE
T ss_pred CCCCcccchhHHHHHHHHHHHHcCCCCEEE
Confidence 0 00011222578888888887799874
No 304
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=71.31 E-value=20 Score=31.85 Aligned_cols=77 Identities=12% Similarity=0.103 Sum_probs=58.9
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEECCCCC----------CCCC-CHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCLPELF----------FTPA-SVE 207 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~PP~y----------~~~~-s~e 207 (239)
..+|.+|....++.+...+ ++||++=. +-.+..++.+.++...++||++|-+---.. -+.+ +++
T Consensus 56 ~~vt~~em~~~~~~I~~~~---~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~ 132 (290)
T 2hjp_A 56 NILSMSTHLEMMRAIASTV---SIPLIADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIE 132 (290)
T ss_dssp TCSCHHHHHHHHHHHHTTC---SSCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHH
T ss_pred CCCCHHHHHHHHHHHHhcC---CCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHH
Confidence 3689999999999998876 57999832 212889999999999999999999854221 1222 778
Q ss_pred HHHHHHHHHHhhC
Q psy9602 208 DLVDYLRDVGEAA 220 (239)
Q Consensus 208 ~iv~yf~~Vaeat 220 (239)
+..+..+++.++.
T Consensus 133 e~~~kI~Aa~~a~ 145 (290)
T 2hjp_A 133 EFQGKIAAATAAR 145 (290)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 8888898888874
No 305
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=71.30 E-value=11 Score=30.67 Aligned_cols=60 Identities=17% Similarity=0.272 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHH
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRD 215 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~ 215 (239)
++.+.++......+. ++|+++ |+...+..+ +.++|+|++.+..+.+-.+ +.++..+-++.
T Consensus 155 ~~i~~~~~~~~~~~~-~~~i~v~GGI~~~~~~~-------~~~~Gad~vvvGsai~~~~-d~~~a~~~~~~ 216 (220)
T 2fli_A 155 EKVATVAKWRDEKGL-SFDIEVDGGVDNKTIRA-------CYEAGANVFVAGSYLFKAS-DLVSQVQTLRT 216 (220)
T ss_dssp HHHHHHHHHHHHTTC-CCEEEEESSCCTTTHHH-------HHHHTCCEEEESHHHHTSS-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC-CceEEEECcCCHHHHHH-------HHHcCCCEEEEChHHhCCC-CHHHHHHHHHH
Confidence 444445554443332 578766 566533333 3445999999998877665 66666555544
No 306
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=71.21 E-value=44 Score=30.00 Aligned_cols=96 Identities=20% Similarity=0.208 Sum_probs=68.4
Q ss_pred CCCCEEEec-----cccC--CcCCCHHHHHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 127 PIIDQMVNG-----TTGE--GVSMTTAERKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 127 gg~glvV~G-----stGE--~~sLT~eER~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
|...+++.| +.|- ...+|.+|....++.++..+ ++||++=. |..+..++.+.++..+++||++|-+--
T Consensus 49 G~dai~vs~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~---~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED 125 (305)
T 3ih1_A 49 GFLALYLSGAAYTASKGLPDLGIVTSTEVAERARDLVRAT---DLPVLVDIDTGFGGVLNVARTAVEMVEAKVAAVQIED 125 (305)
T ss_dssp TCSCEEECHHHHHHHHTCCSSSCSCHHHHHHHHHHHHHHH---CCCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCEEEECcHHHHHhCCCCCCCcCCHHHHHHHHHHHHHhc---CCCEEEECCCCCCCHHHHHHHHHHHHHhCCcEEEECC
Confidence 445666666 3343 23579999999999999887 46999833 234678899999999999999998754
Q ss_pred CCC--------CCCC-CHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 198 ELF--------FTPA-SVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 198 P~y--------~~~~-s~e~iv~yf~~VaeatpdLPIiL 227 (239)
-.+ -+.. +.++..+-.+++.++. .+++|
T Consensus 126 ~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~--~~~~I 162 (305)
T 3ih1_A 126 QQLPKKCGHLNGKKLVTTEELVQKIKAIKEVA--PSLYI 162 (305)
T ss_dssp BCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHC--TTSEE
T ss_pred CCCCcccCCCCCCcccCHHHHHHHHHHHHHcC--CCeEE
Confidence 211 1111 7789999999998883 44443
No 307
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=71.16 E-value=27 Score=31.97 Aligned_cols=69 Identities=13% Similarity=0.130 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
+=.++++.+.+.++. ++++++=. ++-+.++++++++..++.|++.+= .|+ . + ++.++.|.+++ ++||
T Consensus 198 ~~~e~v~avR~avG~-d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-~P~----~-d----~~~~~~l~~~~-~iPI 265 (409)
T 3go2_A 198 NLRAHLEALRDGAGP-DVEILLDLNFNAKPEGYLKILRELADFDLFWVE-IDS----Y-S----PQGLAYVRNHS-PHPI 265 (409)
T ss_dssp HHHHHHHHHHHHHCT-TSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEE-CCC----S-C----HHHHHHHHHTC-SSCE
T ss_pred HHHHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEE-eCc----C-C----HHHHHHHHhhC-CCCE
Confidence 345778888888877 89999955 467899999999999999998877 332 1 2 23468888888 7999
Q ss_pred EE
Q psy9602 226 FY 227 (239)
Q Consensus 226 iL 227 (239)
+.
T Consensus 266 a~ 267 (409)
T 3go2_A 266 SS 267 (409)
T ss_dssp EE
T ss_pred Ee
Confidence 86
No 308
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=71.02 E-value=13 Score=33.85 Aligned_cols=75 Identities=17% Similarity=0.080 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEecC-CC-CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhC
Q psy9602 143 MTTAERKLNLEAWMTEAKTHGFTVMVQIG-GT-CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAA 220 (239)
Q Consensus 143 LT~eER~~li~~vve~~~G~rvpVIaGVg-~~-St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeat 220 (239)
.+.++=.++++.+.+.++. ++++++-.. +- +.++++++++..++.|.+.+= .|. .+ +. ++.++.|.+.+
T Consensus 186 ~~~~~d~e~v~avR~a~G~-d~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iE--eP~--~~---~d-~~~~~~l~~~~ 256 (394)
T 3mkc_A 186 WSTKEVAYYLRELRGILGH-DTDMMVDYLYRFTDWYEVARLLNSIEDLELYFAE--ATL--QH---DD-LSGHAKLVENT 256 (394)
T ss_dssp CCHHHHHHHHHHHHHHHCS-SSEEEEECTTCCCCHHHHHHHHHHTGGGCCSEEE--SCS--CT---TC-HHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEE--CCC--Cc---hh-HHHHHHHHhhC
Confidence 3577778899999999977 899999664 45 789999999999999987654 343 12 11 45678888888
Q ss_pred CCCcEEE
Q psy9602 221 PATPLFY 227 (239)
Q Consensus 221 pdLPIiL 227 (239)
++||+.
T Consensus 257 -~iPIa~ 262 (394)
T 3mkc_A 257 -RSRICG 262 (394)
T ss_dssp -SSCBEE
T ss_pred -CCCEEe
Confidence 799875
No 309
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=70.87 E-value=10 Score=34.18 Aligned_cols=63 Identities=16% Similarity=0.269 Sum_probs=52.0
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC--CC-------C---CCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP--EL-------F---FTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P--P~-------y---~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..|+++++.+.+.++..+.++.+++.|+|+|-+-- |. | +.. +.+-+.+-.+++.+++ ++||.+
T Consensus 57 ~~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~-~~~~~~eiv~av~~~v-~~PV~v 131 (350)
T 3b0p_A 57 EHPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLL-DLARVREILKAMGEAV-RVPVTV 131 (350)
T ss_dssp GCSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGG-CHHHHHHHHHHHHHHC-SSCEEE
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHh-CHHHHHHHHHHHHHHh-CCceEE
Confidence 46999999988999999999999999999998864 43 1 111 5678888889999988 899988
No 310
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=70.82 E-value=14 Score=30.74 Aligned_cols=58 Identities=12% Similarity=0.211 Sum_probs=36.9
Q ss_pred HHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhh
Q psy9602 152 LEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 152 i~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaea 219 (239)
++.+.+... ++|+++ |++..+..++++ +|||.+.+..-.+-.+ +.++..+-|+...+.
T Consensus 164 i~~~~~~~~--~~pi~v~GGI~~~ni~~~~~-------aGaD~vvvGsai~~~~-d~~~~~~~l~~~~~~ 223 (228)
T 1h1y_A 164 VRALRKKYP--SLDIEVDGGLGPSTIDVAAS-------AGANCIVAGSSIFGAA-EPGEVISALRKSVEG 223 (228)
T ss_dssp HHHHHHHCT--TSEEEEESSCSTTTHHHHHH-------HTCCEEEESHHHHTSS-CHHHHHHHHHHHHHH
T ss_pred HHHHHHhcC--CCCEEEECCcCHHHHHHHHH-------cCCCEEEECHHHHCCC-CHHHHHHHHHHHHHH
Confidence 444555442 478776 676665555443 3999999997655555 667766666665544
No 311
>1wdd_A Ribulose bisphosphate carboxylase large chain; rubisco, photosynthesis, alpha/beta barrel, N-methylmethioni translational modification, lyase; HET: KCX CAP; 1.35A {Oryza sativa} SCOP: c.1.14.1 d.58.9.1 PDB: 3axk_A* 3axm_A* 1rlc_L* 4rub_A* 3rub_L 1ej7_L 1aa1_L* 1aus_L 1rbo_L* 1rco_L* 1rcx_L* 1rxo_L* 1gk8_A* 1ir2_A* 1uzd_A* 1uzh_A* 2v69_A* 1uwa_A* 2v63_A* 2v67_A* ...
Probab=70.80 E-value=13 Score=35.62 Aligned_cols=84 Identities=12% Similarity=-0.061 Sum_probs=56.7
Q ss_pred HHHHHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHH----HHhcCCCceEEEecCCCCHHHHHHHHHHHHh
Q psy9602 113 LTCMLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWM----TEAKTHGFTVMVQIGGTCFQEVVELAKHAES 187 (239)
Q Consensus 113 ~~~~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vv----e~~~G~rvpVIaGVg~~St~eAIelar~A~~ 187 (239)
+-+.++.-+.....||.+++=.= .-+.-.+...+||...+..++ +.++. +.-..++|++.+.++.++.+++|++
T Consensus 181 s~~~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~eai~rA~~eTGe-~k~~~~NiTa~~~~eM~~Ra~~a~e 259 (477)
T 1wdd_A 181 SAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEAIYKSQAETGE-IKGHYLNATAGTCEEMIKRAVFARE 259 (477)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSS-CCEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCceeeCCccCCCCCCCcHHHHHHHHHHHHHHHHHhhCC-cceeecCcCCCCHHHHHHHHHHHHH
Confidence 33344444444456776666221 123456778899986444333 34544 4555679999999999999999999
Q ss_pred CCCCEEEECC
Q psy9602 188 LNVHAVLCLP 197 (239)
Q Consensus 188 aGAdaVlV~P 197 (239)
+|+.++|+-+
T Consensus 260 ~G~~~~mvd~ 269 (477)
T 1wdd_A 260 LGVPIVMHDY 269 (477)
T ss_dssp HTCSEEEEEH
T ss_pred hCCCeEEEec
Confidence 9999999973
No 312
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=70.75 E-value=12 Score=33.40 Aligned_cols=66 Identities=15% Similarity=0.088 Sum_probs=46.5
Q ss_pred ceEEEecCCC------------CHHHHHHHHHHHHhCCCCEEEECC----CCCCCCCCHHHHHHHH---HHHHhhCCCCc
Q psy9602 164 FTVMVQIGGT------------CFQEVVELAKHAESLNVHAVLCLP----ELFFTPASVEDLVDYL---RDVGEAAPATP 224 (239)
Q Consensus 164 vpVIaGVg~~------------St~eAIelar~A~~aGAdaVlV~P----P~y~~~~s~e~iv~yf---~~VaeatpdLP 224 (239)
-|.|.|+-.. +.+.++++++...+.|||-+-|-- |..-.--.++++.+.. +.|.+.+ ++|
T Consensus 39 ~~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vp 117 (297)
T 1tx2_A 39 KTLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLP 117 (297)
T ss_dssp SCEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSC
T ss_pred CCEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-Cce
Confidence 3667777543 368999999999999999999984 2221110366666555 7888888 899
Q ss_pred EEEEeC
Q psy9602 225 LFYYHI 230 (239)
Q Consensus 225 IiLYN~ 230 (239)
|.|--+
T Consensus 118 iSIDT~ 123 (297)
T 1tx2_A 118 ISIDTY 123 (297)
T ss_dssp EEEECS
T ss_pred EEEeCC
Confidence 988543
No 313
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=70.70 E-value=4.7 Score=37.08 Aligned_cols=45 Identities=18% Similarity=0.166 Sum_probs=31.8
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEECCC
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMV-QIGGTCFQEVVELAKHAESLNVHAVLCLPE 198 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIa-GVg~~St~eAIelar~A~~aGAdaVlV~PP 198 (239)
..|+.+. ++.+.+.. ++||++ ++ .+ .+.++.|+++|+|+|.|...
T Consensus 202 ~~~~w~~----i~~lr~~~---~~PvivK~v--~~----~e~A~~a~~~GaD~I~vsn~ 247 (352)
T 3sgz_A 202 ASFCWND----LSLLQSIT---RLPIILKGI--LT----KEDAELAMKHNVQGIVVSNH 247 (352)
T ss_dssp TTCCHHH----HHHHHHHC---CSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCG
T ss_pred CCCCHHH----HHHHHHhc---CCCEEEEec--Cc----HHHHHHHHHcCCCEEEEeCC
Confidence 4567664 55555555 469888 55 23 46688999999999999763
No 314
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=70.66 E-value=20 Score=32.73 Aligned_cols=76 Identities=13% Similarity=0.040 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ +.-++.++.|.+.+ +
T Consensus 181 ~~~~d~~~v~avR~a~g~-~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--eP~--~~---~d~~~~~~~l~~~~-~ 251 (392)
T 3ddm_A 181 DDARDVRNALHVRELLGA-ATPLMADANQGWDLPRARQMAQRLGPAQLDWLE--EPL--RA---DRPAAEWAELAQAA-P 251 (392)
T ss_dssp CHHHHHHHHHHHHHHHCS-SSCEEEECTTCCCHHHHHHHHHHHGGGCCSEEE--CCS--CT---TSCHHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHhcCC-CceEEEeCCCCCCHHHHHHHHHHHHHhCCCEEE--CCC--Cc---cchHHHHHHHHHhc-C
Confidence 567778899999999877 89999955 577899999999999999987664 333 12 11146677888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 252 iPIa~d 257 (392)
T 3ddm_A 252 MPLAGG 257 (392)
T ss_dssp SCEEEC
T ss_pred CCEEeC
Confidence 999863
No 315
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=70.44 E-value=13 Score=33.77 Aligned_cols=78 Identities=18% Similarity=0.095 Sum_probs=60.4
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEECC----CCC--C--CCC-CHHHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCLP----ELF--F--TPA-SVEDL 209 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~P----P~y--~--~~~-s~e~i 209 (239)
..+|.+|....++.+...+. ++|||+=. +-.+..++.+.++...++||++|.+-- |-. . +.+ ++++.
T Consensus 81 ~~vt~~em~~~~~~I~r~~~--~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~ 158 (318)
T 1zlp_A 81 GLLTTTEVVEATRRITAAAP--NLCVVVDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEH 158 (318)
T ss_dssp SCSCHHHHHHHHHHHHHHSS--SSEEEEECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHH
T ss_pred CCCCHHHHHHHHHHHHhhcc--CCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHH
Confidence 46899999999999999875 48999933 212899999999999999999999853 211 1 112 78888
Q ss_pred HHHHHHHHhhC
Q psy9602 210 VDYLRDVGEAA 220 (239)
Q Consensus 210 v~yf~~Vaeat 220 (239)
.+..+++.++.
T Consensus 159 ~~rI~Aa~~A~ 169 (318)
T 1zlp_A 159 ALKIAAAREAI 169 (318)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888888774
No 316
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=70.41 E-value=18 Score=33.40 Aligned_cols=72 Identities=10% Similarity=-0.009 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.+.++.+.+.++. ++++++=+ ++-+.++++++++..++.|++.+= -|. .+ . =++.++.|.+++ ++|
T Consensus 214 ~~die~v~avReavG~-d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iE--eP~--~~-~---d~~~~~~l~~~~-~iP 283 (412)
T 3stp_A 214 RENLKRVEAVREVIGY-DNDLMLECYMGWNLDYAKRMLPKLAPYEPRWLE--EPV--IA-D---DVAGYAELNAMN-IVP 283 (412)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE--CCS--CT-T---CHHHHHHHHHTC-SSC
T ss_pred HHHHHHHHHHHHHcCC-CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--CCC--Cc-c---cHHHHHHHHhCC-CCC
Confidence 5567788889999877 89999955 577899999999999999988664 333 12 1 145668888888 799
Q ss_pred EEE
Q psy9602 225 LFY 227 (239)
Q Consensus 225 IiL 227 (239)
|+.
T Consensus 284 Ia~ 286 (412)
T 3stp_A 284 ISG 286 (412)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
No 317
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=70.28 E-value=13 Score=36.40 Aligned_cols=107 Identities=10% Similarity=0.004 Sum_probs=62.4
Q ss_pred HHHHhhHHhhhcCCCC-EEEecccc----------------CCcCCCHHHHHHHHH----HHHHHhcCCCceEEEecC--
Q psy9602 115 CMLLVGITLRMAPIID-QMVNGTTG----------------EGVSMTTAERKLNLE----AWMTEAKTHGFTVMVQIG-- 171 (239)
Q Consensus 115 ~~l~~~v~~~~~gg~g-lvV~GstG----------------E~~sLT~eER~~li~----~vve~~~G~rvpVIaGVg-- 171 (239)
..++.......+.|-+ +=+.|..| |+ -=|.+-|.+++. .+.+.++. +.||.+=++
T Consensus 149 ~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~y-GGs~enR~r~~~eiv~avr~~vg~-~~pv~vrls~~ 226 (729)
T 1o94_A 149 QFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKY-GGSLENRARFWLETLEKVKHAVGS-DCAIATRFGVD 226 (729)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTT-SSSHHHHTHHHHHHHHHHHHHHTT-TSEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcC-CCCHHHHhHHHHHHHHHHHHHhCC-CceEEEEEccc
Confidence 3454444444555544 43666553 32 235677765554 44555655 678888554
Q ss_pred ------CCC-HHHHHHHHHHHHhCCCCEEEECCCC-----------CCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 172 ------GTC-FQEVVELAKHAESLNVHAVLCLPEL-----------FFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 172 ------~~S-t~eAIelar~A~~aGAdaVlV~PP~-----------y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.+ .++++++++.+++ |+|.+-+..-. .+.+ +.-...+.+.|.+++ ++|||.
T Consensus 227 ~~~~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~-~~pvi~ 296 (729)
T 1o94_A 227 TVYGPGQIEAEVDGQKFVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQ--QGHTIPWVKLVKQVS-KKPVLG 296 (729)
T ss_dssp CSSCTTSCCTTTHHHHHHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCC--TTTTHHHHHHHHTTC-SSCEEC
T ss_pred cCcCCCCCCchHHHHHHHHHHHh-hcCEEEEeeecccccccccCCccccC--ccccHHHHHHHHHHC-CCEEEE
Confidence 233 4689999999988 79987554311 1111 111245667787888 899884
No 318
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=70.26 E-value=14 Score=34.37 Aligned_cols=85 Identities=9% Similarity=-0.026 Sum_probs=52.6
Q ss_pred HHHHHhhHHhhhcCCCCEE-Eecccc--------CCcCC-------CH-HHHHH----HHHHHHHHh----cCCCceEEE
Q psy9602 114 TCMLLVGITLRMAPIIDQM-VNGTTG--------EGVSM-------TT-AERKL----NLEAWMTEA----KTHGFTVMV 168 (239)
Q Consensus 114 ~~~l~~~v~~~~~gg~glv-V~GstG--------E~~sL-------T~-eER~~----li~~vve~~----~G~rvpVIa 168 (239)
...|+.......+.|-+++ +.|..| -.... |. +-|.+ |++.+.+.+ +. +.||.+
T Consensus 169 i~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~-~f~v~v 247 (419)
T 3l5a_A 169 IQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPD-NFILGF 247 (419)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCT-TCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCC-CeeEEE
Confidence 3455555555566565443 665542 21111 22 55554 555555555 33 567777
Q ss_pred ecC---------CCCHHHHHHHHHHHHh-CCCCEEEECCCC
Q psy9602 169 QIG---------GTCFQEVVELAKHAES-LNVHAVLCLPEL 199 (239)
Q Consensus 169 GVg---------~~St~eAIelar~A~~-aGAdaVlV~PP~ 199 (239)
=++ +.+.++++++++..++ +|+|.+-|....
T Consensus 248 Ris~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~ 288 (419)
T 3l5a_A 248 RATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWG 288 (419)
T ss_dssp EECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTT
T ss_pred ecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCC
Confidence 444 3468999999999999 999999998764
No 319
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=70.23 E-value=24 Score=33.24 Aligned_cols=80 Identities=14% Similarity=0.020 Sum_probs=53.7
Q ss_pred HHHhhHHhhhcCCCCEEEe-ccccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC
Q psy9602 116 MLLVGITLRMAPIIDQMVN-GTTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 116 ~l~~~v~~~~~gg~glvV~-GstGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA 190 (239)
.++.-+.....||.+++=. =..+.-.++..+||...+..+++ .++. +.-..++|++. +++.++.+++|.++|+
T Consensus 157 ~~a~~~ye~~~GGlDfiKDDE~l~~q~f~p~~eRv~~v~eai~rA~~eTGe-~k~y~~NiTa~-~~em~~ra~~a~e~G~ 234 (414)
T 3fk4_A 157 YLKTQLRDQAIGGVDIVKDDEILFENALTPLTKRIVSGKEVLQSVYETYGH-KTLYAVNLTGR-TFDLKENAKRAVQAGA 234 (414)
T ss_dssp HHHHHHHHHHHTTCSEEECCTTCCSCSSSCHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCSC-GGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCcCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCC-cceEEeEcCCC-HHHHHHHHHHHHHcCC
Confidence 3333333344556555511 02224567889999877665554 3444 45566799986 6999999999999999
Q ss_pred CEEEECC
Q psy9602 191 HAVLCLP 197 (239)
Q Consensus 191 daVlV~P 197 (239)
.++|+-+
T Consensus 235 ~~~mvd~ 241 (414)
T 3fk4_A 235 DILLFNV 241 (414)
T ss_dssp SEEEECH
T ss_pred CEEEEcc
Confidence 9999874
No 320
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=70.13 E-value=13 Score=33.04 Aligned_cols=61 Identities=15% Similarity=0.217 Sum_probs=43.1
Q ss_pred CceEEEecCCCCH------HHHHHHHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCF------QEVVELAKHAESLNVHAVLCLP-ELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St------~eAIelar~A~~aGAdaVlV~P-P~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+..||+=+--.|. .+..+.++.+ +.||+++.|+. |.||+. +. +|+..+..++ ++||+-=||
T Consensus 45 ~~~iIAEiKraSPSkg~i~~dp~~iA~~~-~~GA~aiSVLTd~~~F~G-s~----~~L~~vr~~v-~lPvLrKDF 112 (258)
T 4a29_A 45 ITAIIAVYERKSPSGLDVERDPIEYAKFM-ERYAVGLSITTEEKYFNG-SY----ETLRKIASSV-SIPILMSDF 112 (258)
T ss_dssp CCCEEEEECSBCTTSCBCCCCHHHHHHHH-TTTCSEEEEECCSTTTCC-CH----HHHHHHHTTC-SSCEEEESC
T ss_pred CcEEEEEEecCCCCCCCccCCHHHHHHHH-hCCCeEEEEeCCCCCCCC-CH----HHHHHHHHhc-CCCEeeccc
Confidence 5667775533222 2456677766 47999999887 778887 55 5668888888 899987665
No 321
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=70.10 E-value=58 Score=28.74 Aligned_cols=96 Identities=15% Similarity=0.179 Sum_probs=52.2
Q ss_pred hhHHhhhcCCCCEE-Eec-cccCC-cCCC-HHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEE
Q psy9602 119 VGITLRMAPIIDQM-VNG-TTGEG-VSMT-TAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVL 194 (239)
Q Consensus 119 ~~v~~~~~gg~glv-V~G-stGE~-~sLT-~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVl 194 (239)
.+...+++.|.+++ |+| +|.-+ ...+ .||..+++..+.......++||.+-.. .. +-++.|.++|++-+-
T Consensus 42 ~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~--~~----~va~aAl~aGa~iIN 115 (282)
T 1aj0_A 42 KHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTS--KP----EVIRESAKVGAHIIN 115 (282)
T ss_dssp HHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECC--CH----HHHHHHHHTTCCEEE
T ss_pred HHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCC--CH----HHHHHHHHcCCCEEE
Confidence 45667788899988 888 55222 2344 566655555554332211366654333 22 234555566888776
Q ss_pred ECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 195 CLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 195 V~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
-..-. . ++++ +.-++ .. +.|+++-..
T Consensus 116 dvsg~--~---d~~~---~~~~a-~~-~~~vVlmh~ 141 (282)
T 1aj0_A 116 DIRSL--S---EPGA---LEAAA-ET-GLPVCLMHM 141 (282)
T ss_dssp ETTTT--C---STTH---HHHHH-HH-TCCEEEECC
T ss_pred ECCCC--C---CHHH---HHHHH-Hh-CCeEEEEcc
Confidence 65432 1 1223 33333 34 788888765
No 322
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=70.09 E-value=21 Score=33.76 Aligned_cols=71 Identities=13% Similarity=0.058 Sum_probs=42.8
Q ss_pred hhcCCCCEEEeccccCCcCCCHHH-------HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 124 RMAPIIDQMVNGTTGEGVSMTTAE-------RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 124 ~~~gg~glvV~GstGE~~sLT~eE-------R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
..+.|.+.++.|. |.+...+..+ ...++..+++.++..++|||+.=|-.+..++.+. .++|||+|++-
T Consensus 287 l~~aGaD~I~vg~-g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~ka----l~~GAd~V~vG 361 (490)
T 4avf_A 287 LAEAGADAVKVGI-GPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKA----MVAGAYCVMMG 361 (490)
T ss_dssp HHHTTCSEEEECS-SCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHH----HHHTCSEEEEC
T ss_pred HHHcCCCEEEECC-CCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHH----HHcCCCeeeec
Confidence 4455666554443 4454444432 3455666666664336999995444455555543 45699999998
Q ss_pred CCC
Q psy9602 197 PEL 199 (239)
Q Consensus 197 PP~ 199 (239)
..+
T Consensus 362 s~~ 364 (490)
T 4avf_A 362 SMF 364 (490)
T ss_dssp TTT
T ss_pred HHH
Confidence 755
No 323
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=70.02 E-value=14 Score=33.79 Aligned_cols=44 Identities=18% Similarity=0.092 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHhcCCCceEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMV-QIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIa-GVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
..+.++.+++.+ ++||++ +++..-+ .+.++.++++|+|++.|..
T Consensus 175 ~~~~i~~i~~~~---~vPVivK~vG~g~s---~~~A~~l~~aGad~I~V~g 219 (368)
T 3vkj_A 175 ALEKLRDISKEL---SVPIIVKESGNGIS---METAKLLYSYGIKNFDTSG 219 (368)
T ss_dssp HHHHHHHHHTTC---SSCEEEECSSSCCC---HHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHHHHHHc---CCCEEEEeCCCCCC---HHHHHHHHhCCCCEEEEeC
Confidence 566777777665 589999 3443222 4568899999999999964
No 324
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=69.93 E-value=21 Score=30.29 Aligned_cols=59 Identities=22% Similarity=0.173 Sum_probs=42.0
Q ss_pred HHHHHHHh--cCCCceEEEecCCCC------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 152 LEAWMTEA--KTHGFTVMVQIGGTC------FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 152 i~~vve~~--~G~rvpVIaGVg~~S------t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
+....+.. ++ .+|+.+-+.. .....++|+.+++.||.++.+. + .++.+.+.+.+ ++
T Consensus 7 ~~~~~~~~~~~~---~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~--------~----~~~i~~ir~~v-~~ 70 (232)
T 3igs_A 7 LEQLDKNIAASG---GLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE--------G----IDNLRMTRSLV-SV 70 (232)
T ss_dssp HHHHHHHHHHHC---CEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE--------S----HHHHHHHHTTC-CS
T ss_pred HHHHHHHhhhcC---CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC--------C----HHHHHHHHHhc-CC
Confidence 34444444 55 3555554444 8899999999999999998872 2 35678888888 89
Q ss_pred cEE
Q psy9602 224 PLF 226 (239)
Q Consensus 224 PIi 226 (239)
||+
T Consensus 71 Pvi 73 (232)
T 3igs_A 71 PII 73 (232)
T ss_dssp CEE
T ss_pred CEE
Confidence 986
No 325
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=69.92 E-value=9.6 Score=34.26 Aligned_cols=58 Identities=24% Similarity=0.208 Sum_probs=38.5
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC--C-CCC--CH------HHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF--F-TPA--SV------EDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y--~-~~~--s~------e~iv~yf~~VaeatpdLPIiL 227 (239)
+++|++.+. + ++.++.+++.|+|++++..|-+ + ... .. ....+.+..+.+.. ++||+.
T Consensus 145 g~~v~~~v~--t----~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~-~iPVia 213 (369)
T 3bw2_A 145 GTLTLVTAT--T----PEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV-DIPVVA 213 (369)
T ss_dssp TCEEEEEES--S----HHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC-SSCEEE
T ss_pred CCeEEEECC--C----HHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc-CceEEE
Confidence 478888774 3 3457788999999999965432 1 100 00 12467788888888 899875
No 326
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=69.86 E-value=29 Score=30.55 Aligned_cols=76 Identities=16% Similarity=0.091 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+. .. ++++++-. ++-+.++++++++..++.|.+..++--|. .+ . =++.++.|.+.+ +
T Consensus 165 ~~~~d~~~v~avr~~-g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE~P~--~~-~---~~~~~~~l~~~~-~ 235 (345)
T 2zad_A 165 NLKEDIEAVEEIAKV-TR-GAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPV--RR-E---DIEGLKFVRFHS-P 235 (345)
T ss_dssp CHHHHHHHHHHHHHH-ST-TCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEECCS--CT-T---CHHHHHHHHHHS-S
T ss_pred CHHHHHHHHHHHHhh-CC-CCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeeeCCC--Cc-c---cHHHHHHHHHhC-C
Confidence 466667788888887 55 79998855 46689999999999999998822344443 12 1 245667788888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 236 ipia~d 241 (345)
T 2zad_A 236 FPVAAD 241 (345)
T ss_dssp SCEEES
T ss_pred CCEEEe
Confidence 999864
No 327
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=69.63 E-value=19 Score=32.71 Aligned_cols=75 Identities=9% Similarity=0.071 Sum_probs=58.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVG-EAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Va-eatp 221 (239)
+.++=.++++.+.+.++. ++++++=. ++-+.++++++++..++.|++.+= .|. .+ . + .+.++.|. +.+
T Consensus 177 ~~~~d~~~v~avR~a~g~-d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE--qP~--~~-~--d-~~~~~~l~~~~~- 246 (389)
T 3ozy_A 177 APRKDAANLRAMRQRVGA-DVEILVDANQSLGRHDALAMLRILDEAGCYWFE--EPL--SI-D--D-IEGHRILRAQGT- 246 (389)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEE--SCS--CT-T--C-HHHHHHHHTTCC-
T ss_pred CHHHHHHHHHHHHHHcCC-CceEEEECCCCcCHHHHHHHHHHHHhcCCCEEE--CCC--Cc-c--c-HHHHHHHHhcCC-
Confidence 678888999999999977 89999855 577899999999999999988764 343 12 1 1 44577888 888
Q ss_pred CCcEEEE
Q psy9602 222 ATPLFYY 228 (239)
Q Consensus 222 dLPIiLY 228 (239)
++||+.-
T Consensus 247 ~iPIa~d 253 (389)
T 3ozy_A 247 PVRIATG 253 (389)
T ss_dssp SSEEEEC
T ss_pred CCCEEeC
Confidence 7999863
No 328
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=69.63 E-value=6.6 Score=34.36 Aligned_cols=61 Identities=10% Similarity=0.263 Sum_probs=45.9
Q ss_pred CceEEEecCCCCH--------HHHHHHHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCF--------QEVVELAKHAESLNVHAVLCLP-ELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St--------~eAIelar~A~~aGAdaVlV~P-P~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+..||+-+-..|. .+..++|+.+++. |+++-|+. |.||+. + .+|.+.+.+++ ++||+--||
T Consensus 40 ~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~-A~~IsVlTd~~~F~g-s----~~dL~~ir~~v-~lPvLrKDf 109 (251)
T 1i4n_A 40 RVKIIAEFKKASPSAGDINADASLEDFIRMYDEL-ADAISILTEKHYFKG-D----PAFVRAARNLT-CRPILAKDF 109 (251)
T ss_dssp SCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH-CSEEEEECCCSSSCC-C----THHHHHHHTTC-CSCEEEECC
T ss_pred CceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh-CCceEEEecccccCC-C----HHHHHHHHHhC-CCCEEEeeC
Confidence 4677776643221 2778899999998 99999865 778877 4 46677888888 899997775
No 329
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=69.62 E-value=4.1 Score=36.72 Aligned_cols=97 Identities=15% Similarity=0.080 Sum_probs=0.0
Q ss_pred HHhhhhhcc------ccc---cccccCCCCCccccce-----EEEeehhhH---HHHHHHHhhHHhhhc-CCCCEEEecc
Q psy9602 75 KRRRKRLRN------AHG---EVVMIDPSDLPKRAKW-----TIIITAGLL---LLTCMLLVGITLRMA-PIIDQMVNGT 136 (239)
Q Consensus 75 ~~~~~~~~~------~~p---~~~~iD~~~l~~~~~W-----~iv~~A~~~---~~~~~l~~~v~~~~~-gg~glvV~Gs 136 (239)
++++..+++ |+. +++.||.+.+.+++.+ .....||.. +..+ +++.++ |..-++..|.
T Consensus 114 ~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~A-----le~Li~lGvdrILTSG~ 188 (287)
T 3iwp_A 114 KADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAA-----LETLLTLGFERVLTSGC 188 (287)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHH-----HHHHHHHTCSEEEECTT
T ss_pred HHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHH-----HHHHHHcCCCEEECCCC
Q ss_pred ccCCcCCCHHHHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHH
Q psy9602 137 TGEGVSMTTAERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELA 182 (239)
Q Consensus 137 tGE~~sLT~eER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIela 182 (239)
.-+..|-.++++.+++..++ +++|++ ||...+..+.++.+
T Consensus 189 -----~~~a~~Gl~~Lk~Lv~~a~~-rI~ImaGGGV~~~Ni~~l~~~t 230 (287)
T 3iwp_A 189 -----DSSALEGLPLIKRLIEQAKG-RIVVMPGGGITDRNLQRILEGS 230 (287)
T ss_dssp -----SSSTTTTHHHHHHHHHHHTT-SSEEEECTTCCTTTHHHHHHHH
T ss_pred -----CCChHHhHHHHHHHHHHhCC-CCEEEECCCcCHHHHHHHHHhh
No 330
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=69.61 E-value=29 Score=31.20 Aligned_cols=73 Identities=16% Similarity=0.179 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++-+ +..+.++++++++..++.|.+. +--|. .+ . -.+.++.|.+.+ ++|
T Consensus 183 ~~~~e~v~avr~a~G~-d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~--iE~P~--~~-~---~~~~~~~l~~~~-~ip 252 (392)
T 2poz_A 183 ELAYRRVKAVRDAAGP-EIELMVDLSGGLTTDETIRFCRKIGELDICF--VEEPC--DP-F---DNGALKVISEQI-PLP 252 (392)
T ss_dssp HHHHHHHHHHHHHHCT-TSEEEEECTTCSCHHHHHHHHHHHGGGCEEE--EECCS--CT-T---CHHHHHHHHHHC-SSC
T ss_pred HHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCE--EECCC--Cc-c---cHHHHHHHHhhC-CCC
Confidence 4456788888888876 89999865 4668999999999999988664 34443 22 1 256677888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.=
T Consensus 253 Ia~d 256 (392)
T 2poz_A 253 IAVG 256 (392)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9863
No 331
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=69.54 E-value=28 Score=31.46 Aligned_cols=65 Identities=20% Similarity=0.242 Sum_probs=40.1
Q ss_pred HHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCC----CCCCCCCHHHHHHHHHHHHhhCC-CCcE
Q psy9602 151 NLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPE----LFFTPASVEDLVDYLRDVGEAAP-ATPL 225 (239)
Q Consensus 151 li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP----~y~~~~s~e~iv~yf~~Vaeatp-dLPI 225 (239)
.++.+.+.. ++||++... .+ .+.++.+.++|+|+|.|..- .+..+ . ..+...++.+..+ ++||
T Consensus 216 ~i~~l~~~~---~~pv~vK~~-~~----~e~a~~a~~~Gad~I~vs~~ggr~~~~~~-~---~~~~l~~v~~~~~~~ipv 283 (370)
T 1gox_A 216 DVAWLQTIT---SLPILVKGV-IT----AEDARLAVQHGAAGIIVSNHGARQLDYVP-A---TIMALEEVVKAAQGRIPV 283 (370)
T ss_dssp HHHHHHHHC---CSCEEEECC-CS----HHHHHHHHHTTCSEEEECCGGGTSSTTCC-C---HHHHHHHHHHHTTTSSCE
T ss_pred HHHHHHHHh---CCCEEEEec-CC----HHHHHHHHHcCCCEEEECCCCCccCCCcc-c---HHHHHHHHHHHhCCCCEE
Confidence 356666655 479998433 22 36678999999999999651 11111 2 3445556666554 5787
Q ss_pred EE
Q psy9602 226 FY 227 (239)
Q Consensus 226 iL 227 (239)
|.
T Consensus 284 ia 285 (370)
T 1gox_A 284 FL 285 (370)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 332
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=69.52 E-value=3.4 Score=36.33 Aligned_cols=77 Identities=17% Similarity=0.167 Sum_probs=41.8
Q ss_pred EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-CHHHHHH
Q psy9602 133 VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-SVEDLVD 211 (239)
Q Consensus 133 V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-s~e~iv~ 211 (239)
+.|.||.-..+. ++-.++++.+.+.+ ++||++|.|=.+.+++.+. .|||+++|-.-.. +.. ..+.+.+
T Consensus 176 ~~G~TG~~~~~~-~~~~~~v~~vr~~~---~~Pv~vGfGI~t~e~a~~~------~~ADgVIVGSAi~-~~~~~~~~~~~ 244 (271)
T 1ujp_A 176 VTGVTGMRERLP-EEVKDLVRRIKART---ALPVAVGFGVSGKATAAQA------AVADGVVVGSALV-RALEEGRSLAP 244 (271)
T ss_dssp C-------------CCHHHHHHHHTTC---CSCEEEESCCCSHHHHHHH------TTSSEEEECHHHH-HHHHTTCCHHH
T ss_pred cCcccCCCCCCC-ccHHHHHHHHHhhc---CCCEEEEcCCCCHHHHHHh------cCCCEEEEChHHh-cccchHHHHHH
Confidence 457888876643 33346677777654 5899999998777776652 7899999985221 110 0014677
Q ss_pred HHHHHHhhC
Q psy9602 212 YLRDVGEAA 220 (239)
Q Consensus 212 yf~~Vaeat 220 (239)
|.+.+.++.
T Consensus 245 fv~~l~~~~ 253 (271)
T 1ujp_A 245 LLQEIRQGL 253 (271)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776553
No 333
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=69.51 E-value=51 Score=29.15 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-. ++-+.++++++++..++.+.+-.++--|. .+ . =++.++.|.+.+ +
T Consensus 167 ~~~~d~~~v~avr~a~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iEqP~--~~-~---d~~~~~~l~~~~-~ 238 (366)
T 1tkk_A 167 DIATDIARIQEIRKRVGS-AVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVEQPV--HK-D---DLAGLKKVTDAT-D 238 (366)
T ss_dssp CHHHHHHHHHHHHHHHCS-SSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEECCS--CT-T---CHHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEECCC--Cc-c---cHHHHHHHHhhC-C
Confidence 456677888999998876 79998865 46689999999999999333334555553 22 1 145567778888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 239 ipIa~d 244 (366)
T 1tkk_A 239 TPIMAD 244 (366)
T ss_dssp SCEEEC
T ss_pred CCEEEc
Confidence 999864
No 334
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=69.38 E-value=9.5 Score=34.39 Aligned_cols=53 Identities=19% Similarity=0.117 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHhCCCCEEEECC----CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 176 QEVVELAKHAESLNVHAVLCLP----ELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~P----P~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+.++++++...+.|||.+-|-- |-.... +.++..+..+.|.+.+ ++||.|+|.
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~v-s~eee~~vV~~v~~~~-~vplsI~DT 130 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNR-SGAELAEVCKAVADAI-DVPLMIIGC 130 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCC-CHHHHHHHHHHHHHHC-SSCEEEECC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCC-CHHHHHHHHHHHHHhC-CceEEEECC
Confidence 3678889999999999999976 544444 8899999999999999 999999554
No 335
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=69.37 E-value=19 Score=34.15 Aligned_cols=101 Identities=10% Similarity=-0.004 Sum_probs=64.2
Q ss_pred HHhhHHhhhcCCCCEEEe-ccccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCC
Q psy9602 117 LLVGITLRMAPIIDQMVN-GTTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVH 191 (239)
Q Consensus 117 l~~~v~~~~~gg~glvV~-GstGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAd 191 (239)
++.-+.....||.+++=. =..+.-.+...+||...+..+++ .++. +.-..++|+ .+.++.++.+++|.++|++
T Consensus 179 ~a~~~ye~~~GGlDfiKDDE~~~~q~f~p~~eRv~~v~eai~rA~~eTGe-~k~y~~NiT-~~~~em~~Ra~~a~e~G~~ 256 (432)
T 3nwr_A 179 TAALVRELCEAGVDFIKDDEVCANPAHAPLAERVRAVMSEVRRYRERSGR-PVMVAFNIT-DDLDAMRRHAELVEREGGS 256 (432)
T ss_dssp HHHHHHHHHHHTCSEEECCTTCSSCTTSCHHHHHHHHHHHHHHHHHHHSC-CCEEEEECC-SCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCceeECCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC-cceEEeecC-CCHHHHHHHHHHHHHcCCC
Confidence 333333344555555511 12234667889999887665544 4444 455667999 7999999999999999999
Q ss_pred EEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 192 AVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 192 aVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
++|+-+ +.... .. ...+++.. ++||.++
T Consensus 257 ~~mvd~-~~~G~---~a----~~~l~r~~-~~~lh~H 284 (432)
T 3nwr_A 257 CVMASI-NWCGF---SA----IQSLRRTT-PLVLHAH 284 (432)
T ss_dssp EEEEEH-HHHCH---HH----HHHHHHHC-CSEEEEE
T ss_pred EEEEec-cCCCH---HH----HHHHHhcC-CceEEEC
Confidence 999874 21222 33 23444555 7777766
No 336
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=69.27 E-value=37 Score=30.78 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++-+ +..+.++++++++..++.|.+.+ --|. .+ +=++.++.|.+.+ ++|
T Consensus 194 ~~~~e~v~avRea~G~-d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EeP~--~~----~d~~~~~~l~~~~-~iP 263 (410)
T 2qq6_A 194 EAMVARVAAVREAVGP-EVEVAIDMHGRFDIPSSIRFARAMEPFGLLWL--EEPT--PP----ENLDALAEVRRST-STP 263 (410)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTCCCHHHHHHHHHHHGGGCCSEE--ECCS--CT----TCHHHHHHHHTTC-SSC
T ss_pred HHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHhhcCCCeE--ECCC--Ch----hhHHHHHHHHhhC-CCC
Confidence 4456788888888876 79998865 46689999999999999998854 3343 11 1256678888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 264 Ia~d 267 (410)
T 2qq6_A 264 ICAG 267 (410)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9864
No 337
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=69.08 E-value=7.3 Score=37.47 Aligned_cols=45 Identities=20% Similarity=0.183 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhCCCCEEEECCCC----CCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 177 EVVELAKHAESLNVHAVLCLPEL----FFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 177 eAIelar~A~~aGAdaVlV~PP~----y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+++++++.++++||+.+++..-. +..+ + ++.++.|.+++ ++|||.
T Consensus 453 ~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~-d----~~li~~l~~~~-~iPVIa 501 (555)
T 1jvn_A 453 GVWELTRACEALGAGEILLNCIDKDGSNSGY-D----LELIEHVKDAV-KIPVIA 501 (555)
T ss_dssp EHHHHHHHHHHTTCCEEEECCGGGTTTCSCC-C----HHHHHHHHHHC-SSCEEE
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCCCCCCCCC-C----HHHHHHHHHhC-CccEEE
Confidence 47899999999999999986522 2222 2 56677888888 899874
No 338
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=68.94 E-value=3.2 Score=35.07 Aligned_cols=50 Identities=10% Similarity=-0.046 Sum_probs=37.5
Q ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 177 EVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 177 eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
+.+++++.+++.||+.+.+..+..... ......++.+.+.+.+ ++||++-
T Consensus 31 ~~~~~a~~~~~~Ga~~i~v~d~~~~~~-~~g~~~~~i~~i~~~~-~iPvi~~ 80 (266)
T 2w6r_A 31 LLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT-TLPIIAS 80 (266)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTSSC-SSCCCHHHHHHHGGGC-CSCEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEEecCcccC-CCcccHHHHHHHHHhc-CCCEEEE
Confidence 578889999999999999987664321 1112467788899988 8999984
No 339
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=68.94 E-value=14 Score=33.02 Aligned_cols=80 Identities=19% Similarity=0.155 Sum_probs=51.2
Q ss_pred CCCCEEEecc-ccCCcCCCHHHHHHHHHHHHHHhcCCC-ceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Q psy9602 127 PIIDQMVNGT-TGEGVSMTTAERKLNLEAWMTEAKTHG-FTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA 204 (239)
Q Consensus 127 gg~glvV~Gs-tGE~~sLT~eER~~li~~vve~~~G~r-vpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~ 204 (239)
+...++.+|+ .|=+..++. .++++.+++.. . + +|||++-+=.+.+++ ..|.++|||+|+|-.-..-..
T Consensus 145 G~~aVmPlg~pIGsG~Gi~~---~~~L~~i~~~~-~-~~vPVI~~GGI~tpsDA----a~AmeLGAdgVlVgSAI~~a~- 214 (268)
T 2htm_A 145 GTATVMPLAAPIGSGWGVRT---RALLELFAREK-A-SLPPVVVDAGLGLPSHA----AEVMELGLDAVLVNTAIAEAQ- 214 (268)
T ss_dssp TCSCBEEBSSSTTTCCCSTT---HHHHHHHHHTT-T-TSSCBEEESCCCSHHHH----HHHHHTTCCEEEESHHHHTSS-
T ss_pred CCCEEEecCccCcCCcccCC---HHHHHHHHHhc-C-CCCeEEEeCCCCCHHHH----HHHHHcCCCEEEEChHHhCCC-
Confidence 3345677665 555666655 34466666622 2 5 899997666666554 567889999999987544333
Q ss_pred CHHHHHHHHHHH
Q psy9602 205 SVEDLVDYLRDV 216 (239)
Q Consensus 205 s~e~iv~yf~~V 216 (239)
++..+..-|..-
T Consensus 215 dP~~ma~af~~A 226 (268)
T 2htm_A 215 DPPAMAEAFRLA 226 (268)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 566666666553
No 340
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=68.80 E-value=5.6 Score=36.55 Aligned_cols=63 Identities=11% Similarity=0.056 Sum_probs=42.7
Q ss_pred HHHHHHHHHhcCCCceEE-EecCCCC-HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhC
Q psy9602 150 LNLEAWMTEAKTHGFTVM-VQIGGTC-FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAA 220 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVI-aGVg~~S-t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeat 220 (239)
++++.+.+.. ++||+ ++.|+-. .+++.++ .++|||+++|.--.+-.. ++.....-|....+..
T Consensus 230 ell~~i~~~~---~IPVV~VAeGGI~Tpeda~~~----l~~GaDgV~VGsaI~~a~-dP~~aar~l~~ai~~~ 294 (330)
T 2yzr_A 230 EVLLEVKKLG---RLPVVNFAAGGVATPADAALM----MQLGSDGVFVGSGIFKSE-NPLERARAIVEATYNY 294 (330)
T ss_dssp HHHHHHHHHT---SCSSEEEECSCCCSHHHHHHH----HHTTCSCEEESHHHHTSS-CHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC---CCCeEEEEECCCCCHHHHHHH----HHcCcCEEeeHHHHhcCC-CHHHHHHHHHHHHHhc
Confidence 6666666643 68997 7888885 4444333 335999999997655445 6777776666666554
No 341
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=68.62 E-value=32 Score=29.80 Aligned_cols=65 Identities=11% Similarity=0.112 Sum_probs=44.0
Q ss_pred CceEEEec----CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHH---HHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQI----GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYL---RDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGV----g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf---~~VaeatpdLPIiLYN~P 231 (239)
++.||+.. ...+.++.+++...+++.|||-+=+.. ... +.++..+.+ ..+.+..++.|+|.++.=
T Consensus 139 ~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~gaDIvKia~---~~~-~~~D~l~Ll~~~~~~~~~~~~~P~I~~~MG 210 (258)
T 4h3d_A 139 EVKVIISNHDFNKTPKKEEIVSRLCRMQELGADLPKIAV---MPQ-NEKDVLVLLEATNEMFKIYADRPIITMSMS 210 (258)
T ss_dssp TCEEEEEEEESSCCCCHHHHHHHHHHHHHTTCSEEEEEE---CCS-SHHHHHHHHHHHHHHHHHTCSSCBEEEECT
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEEE---ccC-CHHHHHHHHHHHHHHHHhcCCCCEEEEeCC
Confidence 57788754 245668899999999999999876552 122 556555544 444444458999988763
No 342
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=68.60 E-value=12 Score=31.11 Aligned_cols=77 Identities=10% Similarity=0.012 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
+..=..++++-+.+.+...+..+++..... .++..++.+...+.++|++++.|+.. . . ..++.+.+ . ++
T Consensus 21 ~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~~~--~-~-----~~~~~l~~-~-~i 89 (294)
T 3qk7_A 21 NNSTFLEMISWIGIELGKRGLDLLLIPDEP-GEKYQSLIHLVETRRVDALIVAHTQP--E-D-----FRLQYLQK-Q-NF 89 (294)
T ss_dssp SCHHHHHHHHHHHHHHHHTTCEEEEEEECT-TCCCHHHHHHHHHTCCSEEEECSCCS--S-C-----HHHHHHHH-T-TC
T ss_pred cChhHHHHHHHHHHHHHHCCCEEEEEeCCC-hhhHHHHHHHHHcCCCCEEEEeCCCC--C-h-----HHHHHHHh-C-CC
Confidence 333444555555444433234555544332 44445666777778999999987643 2 1 23444444 4 79
Q ss_pred cEEEEeCC
Q psy9602 224 PLFYYHIP 231 (239)
Q Consensus 224 PIiLYN~P 231 (239)
|++++|.+
T Consensus 90 PvV~~~~~ 97 (294)
T 3qk7_A 90 PFLALGRS 97 (294)
T ss_dssp CEEEESCC
T ss_pred CEEEECCC
Confidence 99999875
No 343
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=68.54 E-value=18 Score=33.12 Aligned_cols=74 Identities=11% Similarity=0.082 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
.++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ . . ++.++.|.+++ ++
T Consensus 191 ~~~d~~~v~avR~a~G~-d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE--eP~--~~-~--~-~~~~~~l~~~~-~i 260 (404)
T 4e5t_A 191 LERSEAFCKQIRAAVGT-KADLLFGTHGQFTVSGAKRLARRLEAYDPLWFE--EPI--PP-E--K-PEDMAEVARYT-SI 260 (404)
T ss_dssp HHHHHHHHHHHHHHHGG-GSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEE--CCS--CT-T--C-HHHHHHHHHHC-SS
T ss_pred HHHHHHHHHHHHHHcCC-CCeEEEeCCCCcCHHHHHHHHHHHhhcCCcEEE--CCC--Cc-c--c-HHHHHHHHhhC-CC
Confidence 45567788889999877 79999854 567899999999999999987664 332 12 1 1 35578888888 79
Q ss_pred cEEEE
Q psy9602 224 PLFYY 228 (239)
Q Consensus 224 PIiLY 228 (239)
||+.=
T Consensus 261 PIa~d 265 (404)
T 4e5t_A 261 PVATG 265 (404)
T ss_dssp CEEEC
T ss_pred CEEeC
Confidence 99863
No 344
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=68.46 E-value=36 Score=29.55 Aligned_cols=87 Identities=16% Similarity=0.190 Sum_probs=53.8
Q ss_pred EEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC-C----C----HHHHHHHHHHHHhCCCC--EEEECCCCC
Q psy9602 132 MVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG-T----C----FQEVVELAKHAESLNVH--AVLCLPELF 200 (239)
Q Consensus 132 vV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~-~----S----t~eAIelar~A~~aGAd--aVlV~PP~y 200 (239)
++|-.+|+ .++..+++..+.+. ++|+|+-... . + .+...++...|.++|.+ -+++=|-..
T Consensus 94 iINdvs~~-----~d~~~~~~~~~a~~----~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g 164 (262)
T 1f6y_A 94 MINSTNAE-----REKVEKLFPLAVEH----GAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLIL 164 (262)
T ss_dssp EEEEECSC-----HHHHHHHHHHHHHT----TCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCC
T ss_pred EEEECCCC-----cccHHHHHHHHHHh----CCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCCC
Confidence 56666665 34445777776654 5687774431 1 1 23445677778888986 566665442
Q ss_pred -CCC--CCHHHHHHHHHHHHhhC-CCCcEEE
Q psy9602 201 -FTP--ASVEDLVDYLRDVGEAA-PATPLFY 227 (239)
Q Consensus 201 -~~~--~s~e~iv~yf~~Vaeat-pdLPIiL 227 (239)
+.. ...-++++.++.+.+.. |+.|+++
T Consensus 165 ~~g~~~~~~~~~l~~l~~l~~~~~pg~pvl~ 195 (262)
T 1f6y_A 165 PANVAQDHAPEVLKTLQQIKMLADPAPKTVL 195 (262)
T ss_dssp CTTTCTTHHHHHHHHHHHHHTCCSSCCEEEE
T ss_pred cCCCChHHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 232 02348888888888754 6788876
No 345
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=68.41 E-value=12 Score=30.96 Aligned_cols=73 Identities=18% Similarity=0.245 Sum_probs=35.3
Q ss_pred HHHHHHHHHHhcCCCceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.++++.+.+.+...+..+++. ....+.+...+..+...+.++|++++.|+.. + +.. ++.+.+ . ++|+++
T Consensus 24 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~----~-~~~---~~~l~~-~-~iPvV~ 93 (290)
T 3clk_A 24 QQILDGIQEEAHKNGYNLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIAL----T-DDN---LQLLQS-S-DVPYCF 93 (290)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEC----------CHHHHHHSSCCSEEEEESCC---------C---HHHHHC-C---CEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecccC----C-HHH---HHHHHh-C-CCCEEE
Confidence 345544444443324556554 4445555556677777788999999886532 1 222 333433 4 799999
Q ss_pred EeCC
Q psy9602 228 YHIP 231 (239)
Q Consensus 228 YN~P 231 (239)
.|.+
T Consensus 94 ~~~~ 97 (290)
T 3clk_A 94 LSMG 97 (290)
T ss_dssp ESCC
T ss_pred EcCC
Confidence 8874
No 346
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=68.23 E-value=3.8 Score=36.47 Aligned_cols=58 Identities=22% Similarity=0.224 Sum_probs=38.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
++||++.+. + ++.++.+++.|+|++.+..+.......+.....++..+.+.+ ++||+.
T Consensus 110 g~~v~~~v~--~----~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~-~iPVia 167 (332)
T 2z6i_A 110 GIIVIPVVP--S----VALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAI-SIPVIA 167 (332)
T ss_dssp TCEEEEEES--S----HHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC-SSCEEE
T ss_pred CCeEEEEeC--C----HHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhc-CCCEEE
Confidence 479988773 2 456778889999999997542110001122447788888888 899875
No 347
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=68.21 E-value=11 Score=31.06 Aligned_cols=73 Identities=18% Similarity=0.134 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.|+..-.+ . ++.+ . ++|+++
T Consensus 22 ~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~-----~---~~~l---~-~iPvV~ 89 (288)
T 2qu7_A 22 FTEVLTEISHECQKHHLHVAVASSEENEDKQQDLIETFVSQNVSAIILVPVKSKFQ-----M---KREW---L-KIPIMT 89 (288)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCSSSCCC-----C---CGGG---G-GSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHHcCccEEEEecCCCChH-----H---HHHh---c-CCCEEE
Confidence 34455555444433245666666666777777888888888999999987543211 1 1222 3 689999
Q ss_pred EeCCC
Q psy9602 228 YHIPM 232 (239)
Q Consensus 228 YN~P~ 232 (239)
+|.+.
T Consensus 90 ~~~~~ 94 (288)
T 2qu7_A 90 LDREL 94 (288)
T ss_dssp ESCCC
T ss_pred Eeccc
Confidence 88753
No 348
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=68.17 E-value=4.2 Score=35.82 Aligned_cols=48 Identities=17% Similarity=0.209 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 177 EVVELAKHAESLNVHAVLCLP-ELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 177 eAIelar~A~~aGAdaVlV~P-P~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+..++++.+++.||+++-|+. +.||. +-.+|.+.+.+++ ++||+.-++
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~-----Gs~~~l~~ir~~v-~lPvl~kdf 121 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQ-----GSLDDLDAVRASV-SIPVLRKDF 121 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHH-----HHHHHHHHHHHHC-SSCEEEESC
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcC-----CCHHHHHHHHHhC-CCCEEECcc
Confidence 567899999999999999875 44443 3456888898888 899997764
No 349
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=68.10 E-value=15 Score=33.46 Aligned_cols=76 Identities=17% Similarity=0.122 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|++.+ --|. .+ +-++.++.|.+.+ +
T Consensus 202 ~~~~d~e~v~avR~avG~-d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~i--EqP~--~~----~d~~~~~~l~~~~-~ 271 (398)
T 2pp0_A 202 NCAEDIRRLTAVREALGD-EFPLMVDANQQWDRETAIRMGRKMEQFNLIWI--EEPL--DA----YDIEGHAQLAAAL-D 271 (398)
T ss_dssp CHHHHHHHHHHHHHHHCS-SSCEEEECTTCSCHHHHHHHHHHHGGGTCSCE--ECCS--CT----TCHHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHcCC-CCeEEEECCCCCCHHHHHHHHHHHHHcCCcee--eCCC--Ch----hhHHHHHHHHhhC-C
Confidence 356667888888888876 79998855 46689999999999999998854 3343 12 1256677888888 7
Q ss_pred CcEEEEe
Q psy9602 223 TPLFYYH 229 (239)
Q Consensus 223 LPIiLYN 229 (239)
+||+.-.
T Consensus 272 iPIa~dE 278 (398)
T 2pp0_A 272 TPIATGE 278 (398)
T ss_dssp SCEEECT
T ss_pred CCEEecC
Confidence 9998643
No 350
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=68.04 E-value=31 Score=31.17 Aligned_cols=52 Identities=10% Similarity=-0.024 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhCCCCEEEECC-----------CCCCCCC-----C----HHHHHHHHHHHHhhCCCCcEEE
Q psy9602 176 QEVVELAKHAESLNVHAVLCLP-----------ELFFTPA-----S----VEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~P-----------P~y~~~~-----s----~e~iv~yf~~VaeatpdLPIiL 227 (239)
++-.+.|+.|+++|+|+|-|-. |...+-. + ..-+.+-+++|.+++++-||.+
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~v 232 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGI 232 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEE
Confidence 4667788889999999999954 3322220 1 1235666788888885238888
No 351
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=67.87 E-value=5.4 Score=34.60 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=41.5
Q ss_pred eEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 165 TVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 165 pVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
-+++|- .+.+...+.++.+.+.|+|++.|--- .. .+.+.+++..+.+.+ . ++||++.
T Consensus 11 ~it~gD--P~~~~t~~~~~~l~~~GaD~IelG~S--~g-~t~~~~~~~v~~ir~-~-~~Pivl~ 67 (234)
T 2f6u_A 11 HITKLD--PDRTNTDEIIKAVADSGTDAVMISGT--QN-VTYEKARTLIEKVSQ-Y-GLPIVVE 67 (234)
T ss_dssp EEEEEC--TTSCCCHHHHHHHHTTTCSEEEECCC--TT-CCHHHHHHHHHHHTT-S-CCCEEEC
T ss_pred EEEeeC--CCccccHHHHHHHHHcCCCEEEECCC--CC-CCHHHHHHHHHHhcC-C-CCCEEEe
Confidence 344443 44444455678889999999999852 22 278999999999987 6 8999884
No 352
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=67.87 E-value=64 Score=28.41 Aligned_cols=114 Identities=13% Similarity=-0.010 Sum_probs=58.2
Q ss_pred CCCCCccccceEEEeehhhHHHHHHHHhhHHhhhcCCCCEE-Eec-cccCC--cCCCHHHHHHHHHHHHHHhcCCCceEE
Q psy9602 92 DPSDLPKRAKWTIIITAGLLLLTCMLLVGITLRMAPIIDQM-VNG-TTGEG--VSMTTAERKLNLEAWMTEAKTHGFTVM 167 (239)
Q Consensus 92 D~~~l~~~~~W~iv~~A~~~~~~~~l~~~v~~~~~gg~glv-V~G-stGE~--~sLT~eER~~li~~vve~~~G~rvpVI 167 (239)
.||.|..-++|.- ......+...+++.|.+++ |+| +|.-+ .--..||..+++..+...... ++||.
T Consensus 15 TpDSFsdgg~~~~---------~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~-~~piS 84 (280)
T 1eye_A 15 TDDSFSDGGCYLD---------LDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ-GITVS 84 (280)
T ss_dssp SCCTTCSSCCCCS---------HHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT-TCCEE
T ss_pred CCCCcCCCcccCC---------HHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC-CCEEE
Confidence 4555666566642 1222245567788999988 776 33221 223467777777666655443 57766
Q ss_pred EecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 168 VQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 168 aGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+-+.. . +-++.|.++|++-+--..-... ++++ +.-++ .. +.|+++-..
T Consensus 85 IDT~~--~----~va~aAl~aGa~iINdvsg~~~----d~~m---~~~~a-~~-~~~vVlmh~ 132 (280)
T 1eye_A 85 IDTMR--A----DVARAALQNGAQMVNDVSGGRA----DPAM---GPLLA-EA-DVPWVLMHW 132 (280)
T ss_dssp EECSC--H----HHHHHHHHTTCCEEEETTTTSS----CTTH---HHHHH-HH-TCCEEEECC
T ss_pred EeCCC--H----HHHHHHHHcCCCEEEECCCCCC----CHHH---HHHHH-Hh-CCeEEEEcC
Confidence 54433 2 3345566668877765532111 1222 33344 44 788888765
No 353
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=67.80 E-value=21 Score=32.63 Aligned_cols=81 Identities=11% Similarity=0.078 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCC-CCHHHHHHHHHHHHhCC-CCEEEECCCC---------CCCC---------
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGG-TCFQEVVELAKHAESLN-VHAVLCLPEL---------FFTP--------- 203 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~-~St~eAIelar~A~~aG-AdaVlV~PP~---------y~~~--------- 203 (239)
..+.-.++++.+.+.+ ++||++=+.- .+..+..+.++.+++.| +|+|.+..-. .-.+
T Consensus 177 ~~e~~~~il~av~~~~---~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~g 253 (354)
T 4ef8_A 177 DFDAMRQCLTAVSEVY---PHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFG 253 (354)
T ss_dssp SHHHHHHHHHHHHHHC---CSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEE
T ss_pred CHHHHHHHHHHHHHhh---CCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccC
Confidence 5677788888888875 5799996553 35666677777788998 9999874311 1000
Q ss_pred -CC----HHHHHHHHHHHHhhCCCCcEEE
Q psy9602 204 -AS----VEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 204 -~s----~e~iv~yf~~VaeatpdLPIiL 227 (239)
.+ ..--++....|.++.+++|||.
T Consensus 254 GlSG~~i~p~a~~~i~~v~~~~~~ipII~ 282 (354)
T 4ef8_A 254 GLGGRYVLPTALANINAFYRRCPGKLIFG 282 (354)
T ss_dssp EEEGGGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCchHHHHHHHHHHHhCCCCCEEE
Confidence 01 1344677888888765799874
No 354
>2qyg_A Ribulose bisphosphate carboxylase-like protein 2; beta-alpha-barrel, unknown function; 3.30A {Rhodopseudomonas palustris}
Probab=67.76 E-value=16 Score=34.88 Aligned_cols=95 Identities=17% Similarity=0.052 Sum_probs=60.0
Q ss_pred hhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHH----HHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 123 LRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWM----TEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 123 ~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vv----e~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
....||.+++=.= ..+.-.++..+||...+..++ +.++. +.-..++|+ .+.++.++.+++|+++|+.++|+-+
T Consensus 208 e~~~GGlDfiKDDE~l~~qpf~p~~eR~~~v~eai~ra~~eTGe-~k~y~~NiT-~~~~eM~~Ra~~a~e~G~~~vmvd~ 285 (452)
T 2qyg_A 208 QSWTGGLDIAKDDEMLADVDWCPLAERAALLGDACRRASAETGV-PKIYLANIT-DEVDRLTELHDVAVANGAGALLINA 285 (452)
T ss_dssp HHHHHTCSEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHSS-CCEEEEECC-CCTTHHHHHHHHHHHTTCCEEEEEH
T ss_pred HHHhCCCCcccCCccCCCCCCCcHHHHHHHHHHHHHHHHHHhCC-cceecCcCC-CCHHHHHHHHHHHHHhCCCeEEEec
Confidence 3344555554211 124556788899986543333 34554 455667999 5999999999999999999999963
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 198 ELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 198 P~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
+.... .. ...+++.. ++||.++
T Consensus 286 -~~~G~---~a----~~~la~~~-~l~lh~H 307 (452)
T 2qyg_A 286 -MPVGL---SA----VRMLRKHA-TVPLIAH 307 (452)
T ss_dssp -HHHCH---HH----HHHHHTTC-CSCEEEE
T ss_pred -cccCh---HH----HHHHHhcC-CCeEEEc
Confidence 11111 11 33444444 7887765
No 355
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=67.69 E-value=6 Score=32.97 Aligned_cols=47 Identities=11% Similarity=0.064 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCEEEECC--CCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 177 EVVELAKHAESLNVHAVLCLP--ELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 177 eAIelar~A~~aGAdaVlV~P--P~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..+++++.+++.|++.++++. |-.... .--.+.++.+.+.+ ++||+.
T Consensus 147 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~---g~~~~~~~~i~~~~-~ipvia 195 (244)
T 1vzw_A 147 DLYETLDRLNKEGCARYVVTDIAKDGTLQ---GPNLELLKNVCAAT-DRPVVA 195 (244)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEC----------CCCHHHHHHHHHTC-SSCEEE
T ss_pred CHHHHHHHHHhCCCCEEEEeccCcccccC---CCCHHHHHHHHHhc-CCCEEE
Confidence 567888999999999999875 221110 01256677788887 799875
No 356
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=67.69 E-value=11 Score=36.20 Aligned_cols=80 Identities=16% Similarity=0.088 Sum_probs=54.5
Q ss_pred cCCCC-EEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC
Q psy9602 126 APIID-QMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA 204 (239)
Q Consensus 126 ~gg~g-lvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~ 204 (239)
+-|++ +++.+.+-++..--.+ .++++.+.+.+ ++|||+.=+-.+.+++.++.+. .||+++++.--.|..+.
T Consensus 463 ~~Ga~~il~t~~~~dG~~~G~d--~~li~~l~~~~---~iPVIasGGi~s~~d~~~~~~~---~G~~gvivg~a~~~~~~ 534 (555)
T 1jvn_A 463 ALGAGEILLNCIDKDGSNSGYD--LELIEHVKDAV---KIPVIASSGAGVPEHFEEAFLK---TRADACLGAGMFHRGEF 534 (555)
T ss_dssp HTTCCEEEECCGGGTTTCSCCC--HHHHHHHHHHC---SSCEEECSCCCSHHHHHHHHHH---SCCSEEEESHHHHTTSC
T ss_pred HcCCCEEEEeCCCCCCCCCCCC--HHHHHHHHHhC---CccEEEECCCCCHHHHHHHHHh---cCChHHHHHHHHHcCCC
Confidence 44554 5566655544432221 56777777765 5899997777788887766543 69999999987776665
Q ss_pred CHHHHHHHH
Q psy9602 205 SVEDLVDYL 213 (239)
Q Consensus 205 s~e~iv~yf 213 (239)
+-.++.+|.
T Consensus 535 ~~~e~~~~l 543 (555)
T 1jvn_A 535 TVNDVKEYL 543 (555)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 778887764
No 357
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=67.67 E-value=14 Score=34.15 Aligned_cols=75 Identities=4% Similarity=-0.018 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-. ++.+.++++++++..++.|.+.+ --|. .+ +-++.++.|.+.+ +
T Consensus 211 ~~~~d~e~v~avR~avG~-d~~l~vDan~~~~~~eai~~~~~L~~~~i~~i--EqP~--~~----~d~~~~~~l~~~~-~ 280 (428)
T 3bjs_A 211 AARVDIERVRHVRKVLGD-EVDILTDANTAYTMADARRVLPVLAEIQAGWL--EEPF--AC----NDFASYREVAKIT-P 280 (428)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSEEEEECTTCCCHHHHHHHHHHHHHTTCSCE--ECCS--CT----TCHHHHHHHTTTC-S
T ss_pred CHHHHHHHHHHHHHhcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECCC--Cc----cCHHHHHHHHHhC-C
Confidence 456667888999998876 79998855 46689999999999999998854 3342 12 1256778888888 7
Q ss_pred -CcEEEE
Q psy9602 223 -TPLFYY 228 (239)
Q Consensus 223 -LPIiLY 228 (239)
+||+.-
T Consensus 281 ~iPIa~d 287 (428)
T 3bjs_A 281 LVPIAAG 287 (428)
T ss_dssp SSCEEEC
T ss_pred CCcEEcC
Confidence 898863
No 358
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=67.53 E-value=19 Score=33.11 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
.++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ . . ++.++.|.+.+ ++
T Consensus 184 ~~~d~~~v~avR~a~G~-d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--eP~--~~-~--d-~~~~~~l~~~~-~i 253 (412)
T 4e4u_A 184 LDRCELFCRRVREAVGS-KADLLFGTHGQMVPSSAIRLAKRLEKYDPLWFE--EPV--PP-G--Q-EEAIAQVAKHT-SI 253 (412)
T ss_dssp HHHHHHHHHHHHHHHTT-SSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEE--CCS--CS-S--C-HHHHHHHHHTC-SS
T ss_pred HHHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHhhhcCCcEEE--CCC--Ch-h--h-HHHHHHHHhhC-CC
Confidence 45567788888998877 89999955 577899999999999999987654 332 12 1 1 46678888888 79
Q ss_pred cEEEE
Q psy9602 224 PLFYY 228 (239)
Q Consensus 224 PIiLY 228 (239)
||+.=
T Consensus 254 PIa~d 258 (412)
T 4e4u_A 254 PIATG 258 (412)
T ss_dssp CEEEC
T ss_pred CEEec
Confidence 99863
No 359
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=67.36 E-value=21 Score=33.16 Aligned_cols=74 Identities=11% Similarity=0.025 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
.++=.++++.+.+.++. ++++++-+ ++-+.++++++++..++.|.+.+= -|. .+ + =.+.++.|.+++ ++
T Consensus 186 ~~~d~e~v~avR~avG~-d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iE--eP~--~~---~-~~~~~~~l~~~~-~i 255 (433)
T 3rcy_A 186 ISLSVEFCRKIRAAVGD-KADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYE--EPV--PP---D-NVGAMAQVARAV-RI 255 (433)
T ss_dssp HHHHHHHHHHHHHHHTT-SSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEE--CCS--CT---T-CHHHHHHHHHHS-SS
T ss_pred HHHHHHHHHHHHHHhCC-CCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEE--CCC--Ch---h-hHHHHHHHHhcc-CC
Confidence 34556788888998877 89999955 577899999999999999987664 332 12 1 145678888888 79
Q ss_pred cEEEE
Q psy9602 224 PLFYY 228 (239)
Q Consensus 224 PIiLY 228 (239)
||+.=
T Consensus 256 PIa~d 260 (433)
T 3rcy_A 256 PVATG 260 (433)
T ss_dssp CEEEC
T ss_pred CEEec
Confidence 99863
No 360
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=67.33 E-value=10 Score=33.19 Aligned_cols=76 Identities=16% Similarity=0.105 Sum_probs=52.8
Q ss_pred HHHHHHHhcCCCceE--EEec--CCCCHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCCHHHHHHHHHHHHhhCCC--Cc
Q psy9602 152 LEAWMTEAKTHGFTV--MVQI--GGTCFQEVVELAKHAESLNVHAVLCLPELFF-TPASVEDLVDYLRDVGEAAPA--TP 224 (239)
Q Consensus 152 i~~vve~~~G~rvpV--IaGV--g~~St~eAIelar~A~~aGAdaVlV~PP~y~-~~~s~e~iv~yf~~Vaeatpd--LP 224 (239)
++.+.+...+..+.| ++|. |..+++.-+..++.|.+.|||.+-+..++.. +..+.+.+.+-.++|.+++++ ++
T Consensus 67 v~~a~~~L~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~lK 146 (239)
T 3ngj_A 67 VPLCAELLKGTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGKALTK 146 (239)
T ss_dssp HHHHHHHHTTSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHHHHhCCCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcCCceE
Confidence 344444444434444 4455 6678888899999999999999998887742 222678888899999988843 45
Q ss_pred EEE
Q psy9602 225 LFY 227 (239)
Q Consensus 225 IiL 227 (239)
+||
T Consensus 147 VIl 149 (239)
T 3ngj_A 147 VII 149 (239)
T ss_dssp EEC
T ss_pred EEE
Confidence 543
No 361
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=67.28 E-value=18 Score=32.58 Aligned_cols=75 Identities=9% Similarity=0.045 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCC-HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTC-FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~S-t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
+.++=.+.++.+.+.++. ++++++=. ++-+ .++++++++..++.|.+.+= -|.. + . . ++.++.|.+++
T Consensus 175 ~~~~d~~~v~avR~a~g~-~~~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iE--qP~~--~-~--~-~~~~~~l~~~~- 244 (374)
T 3sjn_A 175 DPDTDYAIVKAVREAAGP-EMEVQIDLASKWHTCGHSAMMAKRLEEFNLNWIE--EPVL--A-D--S-LISYEKLSRQV- 244 (374)
T ss_dssp CHHHHHHHHHHHHHHHCS-SSEEEEECTTTTCSHHHHHHHHHHSGGGCCSEEE--CSSC--T-T--C-HHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEECCCCCCCHHHHHHHHHHhhhcCceEEE--CCCC--c-c--c-HHHHHHHHhhC-
Confidence 467788899999999877 89999965 4567 89999999999999987664 3321 2 1 1 45678888888
Q ss_pred CCcEEEE
Q psy9602 222 ATPLFYY 228 (239)
Q Consensus 222 dLPIiLY 228 (239)
++||+.-
T Consensus 245 ~iPIa~d 251 (374)
T 3sjn_A 245 SQKIAGG 251 (374)
T ss_dssp SSEEEEC
T ss_pred CCCEEeC
Confidence 7999863
No 362
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=67.26 E-value=25 Score=31.89 Aligned_cols=91 Identities=10% Similarity=0.090 Sum_probs=62.4
Q ss_pred hhcCCCC--EEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC--CEEEECCCC
Q psy9602 124 RMAPIID--QMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV--HAVLCLPEL 199 (239)
Q Consensus 124 ~~~gg~g--lvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA--daVlV~PP~ 199 (239)
.++.+.+ -++++.++|. . .+++..+.+. ++|||+-.. .+.+.+-++.+.|.++|. +-+++=|-.
T Consensus 150 Aleagag~~~lINsv~~~~----~---~~m~~laa~~----g~~vVlmh~-~d~~~~~~l~~~a~~~GI~~e~IIlDPg~ 217 (323)
T 4djd_D 150 VAEAAAGENLLLGNAEQEN----Y---KSLTAACMVH----KHNIIARSP-LDINICKQLNILINEMNLPLDHIVIDPSI 217 (323)
T ss_dssp HHHHTTTSCCEEEEEBTTB----C---HHHHHHHHHH----TCEEEEECS-SCHHHHHHHHHHHHTTTCCGGGEEEECCC
T ss_pred HHHhcCCCCCeEEECCccc----H---HHHHHHHHHh----CCeEEEEcc-chHHHHHHHHHHHHHcCCCHHHEEEeCCC
Confidence 3444554 3788888871 1 3566666654 578888543 357788888899999999 668777655
Q ss_pred C-CCCCCHHHHHHHHHHHHh-------hCCCCcEEEE
Q psy9602 200 F-FTPASVEDLVDYLRDVGE-------AAPATPLFYY 228 (239)
Q Consensus 200 y-~~~~s~e~iv~yf~~Vae-------atpdLPIiLY 228 (239)
. +.. +.+.-+..++.|-. .. ++|+++-
T Consensus 218 g~fgk-~~e~~l~~l~~ir~~al~~~~~l-g~PvL~G 252 (323)
T 4djd_D 218 GGLGY-GIEYSFSIMERIRLGALQGDKML-SMPVICT 252 (323)
T ss_dssp CCTTT-THHHHHHHHHHHHHHHHHTCGGG-CSCBEEE
T ss_pred ccccC-CHHHHHHHHHHHHHHhhcccccC-CCCEEEe
Confidence 4 445 77877777777764 46 7898874
No 363
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=67.13 E-value=8.5 Score=36.51 Aligned_cols=63 Identities=16% Similarity=0.151 Sum_probs=46.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
++.|-++++.. .+.++.++.+.++|+|.+.+-..+ + ..+.+.+..+.+.+..|++||++-|..
T Consensus 219 rL~v~aavG~~--~d~~~~a~~l~~aG~d~I~id~a~---g-~~~~~~~~i~~ir~~~p~~~Vi~g~v~ 281 (496)
T 4fxs_A 219 RLRVGAAVGAA--PGNEERVKALVEAGVDVLLIDSSH---G-HSEGVLQRIRETRAAYPHLEIIGGNVA 281 (496)
T ss_dssp CBCCEEECCSS--SCCHHHHHHHHHTTCSEEEEECSC---T-TSHHHHHHHHHHHHHCTTCCEEEEEEC
T ss_pred ceeeeeeeccc--cchHHHHHHHHhccCceEEecccc---c-cchHHHHHHHHHHHHCCCceEEEcccC
Confidence 55555555543 455777888888999999987554 2 446788889999999888999986543
No 364
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=66.96 E-value=32 Score=31.04 Aligned_cols=73 Identities=19% Similarity=0.150 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++-+ +..+.++++++++..++.|.+. +--|. .+ +-.+.++.|.+.+ ++|
T Consensus 193 ~~~~e~v~avr~avG~-d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~--iE~P~--~~----~d~~~~~~l~~~~-~iP 262 (403)
T 2ox4_A 193 KIGVERVEAIRNAVGP-DVDIIVENHGHTDLVSAIQFAKAIEEFNIFF--YEEIN--TP----LNPRLLKEAKKKI-DIP 262 (403)
T ss_dssp HHHHHHHHHHHHHHCT-TSEEEEECTTCSCHHHHHHHHHHHGGGCEEE--EECCS--CT----TSTHHHHHHHHTC-CSC
T ss_pred HHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHHHhhCCCE--EeCCC--Ch----hhHHHHHHHHHhC-CCC
Confidence 4445778888888876 89999865 4668999999999999988664 34443 11 1245678888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 263 Ia~d 266 (403)
T 2ox4_A 263 LASG 266 (403)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9863
No 365
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=66.63 E-value=22 Score=29.56 Aligned_cols=65 Identities=8% Similarity=0.013 Sum_probs=46.7
Q ss_pred CceEEEecCCCCH--HHHHHHHHHHHhCCCCEEEECCCCCCCCC-----------------CHHHHHHHHHHHHhhCCCC
Q psy9602 163 GFTVMVQIGGTCF--QEVVELAKHAESLNVHAVLCLPELFFTPA-----------------SVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 163 rvpVIaGVg~~St--~eAIelar~A~~aGAdaVlV~PP~y~~~~-----------------s~e~iv~yf~~VaeatpdL 223 (239)
+..++..+.+.+. ++.++.++..++. +|.+-+-.|+.-... +.....+..++|.+.+ ++
T Consensus 4 ~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~ 81 (248)
T 1geq_A 4 DGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-ST 81 (248)
T ss_dssp TTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CC
T ss_pred CccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CC
Confidence 5567777755554 7999999999999 999999977632111 1234467788888887 78
Q ss_pred cEEEEe
Q psy9602 224 PLFYYH 229 (239)
Q Consensus 224 PIiLYN 229 (239)
||.+--
T Consensus 82 pv~~~~ 87 (248)
T 1geq_A 82 PIVLMT 87 (248)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 877654
No 366
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=66.52 E-value=16 Score=33.58 Aligned_cols=61 Identities=10% Similarity=-0.074 Sum_probs=39.2
Q ss_pred hhhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 123 LRMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 123 ~~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
...+.+..++ +-.+.|- .+.-.++++.+.+... ++|||+| +.+ .+.++.+.++|||+|.|.
T Consensus 107 ~a~~aGvdvI~id~a~G~-----~~~~~e~I~~ir~~~~--~~~Vi~G~V~T------~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 107 ALRDAGADFFCVDVAHAH-----AKYVGKTLKSLRQLLG--SRCIMAGNVAT------YAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHTTCCEEEEECSCCS-----SHHHHHHHHHHHHHHT--TCEEEEEEECS------HHHHHHHHHTTCSEEEEC
T ss_pred HHHHcCCCEEEEeCCCCC-----cHhHHHHHHHHHHhcC--CCeEEEcCcCC------HHHHHHHHHcCCCEEEEc
Confidence 3455566655 4333342 1233456777777654 5899996 542 456788899999999995
No 367
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=66.45 E-value=58 Score=29.46 Aligned_cols=76 Identities=8% Similarity=0.076 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
..++=.+.++.+.+.++. ++++++-. ++-+.++++++++..++.|.+-..+--|.. + . + .+.+..|.+++ +
T Consensus 168 ~~~~d~~~v~avR~a~g~-~~~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~--~-~--d-~~~~~~l~~~~-~ 239 (379)
T 3r0u_A 168 DFNRDIQLLKALDNEFSK-NIKFRFDANQGWNLAQTKQFIEEINKYSLNVEIIEQPVK--Y-Y--D-IKAMAEITKFS-N 239 (379)
T ss_dssp CHHHHHHHHHHHHHHCCT-TSEEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEECCSC--T-T--C-HHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHhcCC-CCeEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEECCCC--c-c--c-HHHHHHHHhcC-C
Confidence 467778889999998877 79999965 577899999999999994444455555542 2 1 1 45577788888 7
Q ss_pred CcEEE
Q psy9602 223 TPLFY 227 (239)
Q Consensus 223 LPIiL 227 (239)
+||+.
T Consensus 240 iPIa~ 244 (379)
T 3r0u_A 240 IPVVA 244 (379)
T ss_dssp SCEEE
T ss_pred CCEEe
Confidence 99886
No 368
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=66.43 E-value=25 Score=33.23 Aligned_cols=70 Identities=16% Similarity=0.126 Sum_probs=40.6
Q ss_pred hcCCCCEEEeccccCCcCCCHHH-------HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 125 MAPIIDQMVNGTTGEGVSMTTAE-------RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 125 ~~gg~glvV~GstGE~~sLT~eE-------R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
.+.|.+.++.|. |.+...+..+ ....+..+++.++..++|||+.=|-.+..++.+ |.++|||+||+-.
T Consensus 290 ~~aGaD~I~Vg~-g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~k----ala~GAd~V~iGs 364 (496)
T 4fxs_A 290 IEAGVSAVKVGI-GPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISK----AIAAGASCVMVGS 364 (496)
T ss_dssp HHHTCSEEEECS-SCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHH----HHHTTCSEEEEST
T ss_pred HHhCCCEEEECC-CCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHH----HHHcCCCeEEecH
Confidence 444555543332 3344444433 234555666655433689999555555666554 3457999999997
Q ss_pred CC
Q psy9602 198 EL 199 (239)
Q Consensus 198 P~ 199 (239)
.+
T Consensus 365 ~f 366 (496)
T 4fxs_A 365 MF 366 (496)
T ss_dssp TT
T ss_pred HH
Confidence 65
No 369
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=66.16 E-value=24 Score=31.82 Aligned_cols=78 Identities=15% Similarity=-0.006 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|.+..++--|. .+ . -++.++.|.+.+++
T Consensus 172 ~~~~~~e~v~avR~a~G~-~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~--~~-~---~~~~~~~l~~~~~~ 244 (389)
T 2oz8_A 172 DFDRDLRRLELLKTCVPA-GSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVEDPI--LR-H---DHDGLRTLRHAVTW 244 (389)
T ss_dssp SHHHHHHHHHHHHTTSCT-TCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEESCB--CT-T---CHHHHHHHHHHCCS
T ss_pred CHHHHHHHHHHHHHhhCC-CCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeCCC--CC-c---CHHHHHHHHhhCCC
Confidence 345567888888888866 78999865 46689999999999999444433455553 22 1 24566777777624
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 245 iPIa~d 250 (389)
T 2oz8_A 245 TQINSG 250 (389)
T ss_dssp SEEEEC
T ss_pred CCEEeC
Confidence 888763
No 370
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=66.10 E-value=17 Score=34.10 Aligned_cols=83 Identities=12% Similarity=0.002 Sum_probs=55.7
Q ss_pred HHHHHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHH----HHhcCCCceEEEecCCCCHHHHHHHHHHHHh
Q psy9602 113 LTCMLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWM----TEAKTHGFTVMVQIGGTCFQEVVELAKHAES 187 (239)
Q Consensus 113 ~~~~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vv----e~~~G~rvpVIaGVg~~St~eAIelar~A~~ 187 (239)
+-+.++.-+.....||.+++=.= .-+.-.+...+||...+..++ +.++. +.-..++|+ .+.++.++.+++|++
T Consensus 153 s~~~~a~~~ye~~~GGlDfiKDDE~~~~qpf~p~~eR~~~v~eai~ra~~eTGe-~k~~~~NiT-~~~~em~~Ra~~a~e 230 (413)
T 2oem_A 153 DLAYLTSELKKQALGGVDLVKDDEILFDSELLPFEKRITEGKAALQEVYEQTGK-RTLYAVNLT-GKTFALKDKAKRAAE 230 (413)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCTTCCCCSSSCHHHHHHHHHHHHHHHHHHHSC-CCEEEEECC-SCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCceeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHCC-cceeeCcCC-CCHHHHHHHHHHHHH
Confidence 33344443444456666665321 224556788899986543333 34544 455667999 599999999999999
Q ss_pred CCCCEEEECC
Q psy9602 188 LNVHAVLCLP 197 (239)
Q Consensus 188 aGAdaVlV~P 197 (239)
+|+.++|+-+
T Consensus 231 ~G~~~~mvd~ 240 (413)
T 2oem_A 231 LGADVLLFNV 240 (413)
T ss_dssp TTCSEEEECG
T ss_pred hCCCeEEEee
Confidence 9999999973
No 371
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=66.07 E-value=17 Score=32.35 Aligned_cols=63 Identities=17% Similarity=0.173 Sum_probs=45.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC-----CCC---CCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL-----FFT---PASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~-----y~~---~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+.-++.++.... .|+.++++|+|++++-... .+. +.+-++++.|-+.|++.+ +.|+++=|.|.
T Consensus 17 ~~i~~~tayDa~------sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~-~~~~vvaD~pf 87 (275)
T 1o66_A 17 EKIAMLTAYESS------FAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGA-KNAMIVSDLPF 87 (275)
T ss_dssp CCEEEEECCSHH------HHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-SSSEEEEECCT
T ss_pred CcEEEEeCcCHH------HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhC-CCCeEEEECCC
Confidence 444555766543 4667788999999885321 111 128999999999999999 78888899985
No 372
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=66.02 E-value=3.6 Score=36.53 Aligned_cols=64 Identities=9% Similarity=0.106 Sum_probs=43.0
Q ss_pred CceEEEecCC-CCHHHHHHHHHHHHhCCCCEE----EE--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIGG-TCFQEVVELAKHAESLNVHAV----LC--------LPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg~-~St~eAIelar~A~~aGAdaV----lV--------~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
++-||+|..+ .|.+.++++++.++++|++++ +- ..|+.|+...-++=+..++++++.. ++|++-
T Consensus 15 ~~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~~-Gl~~~t 91 (280)
T 2qkf_A 15 PFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEF-GIPVIT 91 (280)
T ss_dssp CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHHH-CCCEEE
T ss_pred ceEEEEecCCCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHHc-CCcEEE
Confidence 4678888864 489999999999999876654 21 1122132213345566778888888 899874
No 373
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=65.71 E-value=5.6 Score=36.52 Aligned_cols=61 Identities=8% Similarity=-0.062 Sum_probs=38.8
Q ss_pred HHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-CHHHHHHHHHHHHhh
Q psy9602 153 EAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-SVEDLVDYLRDVGEA 219 (239)
Q Consensus 153 ~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-s~e~iv~yf~~Vaea 219 (239)
..+.+.++ ++|||+.=+=.+..++++. ..+|||+|++..|+.+... .++.+.++++.+.+.
T Consensus 259 ~~v~~~~~--~ipvia~GGI~~~~d~~ka----l~lGA~~v~ig~~~l~~~~~G~~~v~~~l~~l~~e 320 (368)
T 3vkj_A 259 MEVRYSVP--DSFLVGSGGIRSGLDAAKA----IALGADIAGMALPVLKSAIEGKESLEQFFRKIIFE 320 (368)
T ss_dssp HHHHHHST--TCEEEEESSCCSHHHHHHH----HHHTCSEEEECHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHcC--CCcEEEECCCCCHHHHHHH----HHcCCCEEEEcHHHHHHHhcChHHHHHHHHHHHHH
Confidence 34444443 5899985555666666643 4469999999998865211 456666666655443
No 374
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=65.58 E-value=31 Score=31.65 Aligned_cols=73 Identities=15% Similarity=-0.010 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++-. ++-+.++++++++..++.|.+.+= -|. .+ .+ ++.++.|.+++ ++|
T Consensus 204 ~~d~~~v~avR~a~G~-d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--qP~--~~-~d---~~~~~~l~~~~-~iP 273 (418)
T 3r4e_A 204 NYVPKLFEELRKTYGF-DHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE--DCT--PA-EN---QEAFRLVRQHT-VTP 273 (418)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE--SCS--CC-SS---GGGGHHHHHHC-CSC
T ss_pred HHHHHHHHHHHHHcCC-CCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE--CCC--Cc-cC---HHHHHHHHhcC-CCC
Confidence 4457788889999877 89999966 467899999999999999988764 332 11 11 34477888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 274 Ia~d 277 (418)
T 3r4e_A 274 LAVG 277 (418)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9863
No 375
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=65.48 E-value=24 Score=32.58 Aligned_cols=53 Identities=11% Similarity=0.090 Sum_probs=38.6
Q ss_pred HHHHHHHHHhcCCCceEEEe-cCCCCHHHHHHHHHHHHhCCC----CEEEECCCCCCCC
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQ-IGGTCFQEVVELAKHAESLNV----HAVLCLPELFFTP 203 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaG-Vg~~St~eAIelar~A~~aGA----daVlV~PP~y~~~ 203 (239)
+-++.+..--++ +.-||+| .+-++.+.+++.|+..+++|. +.+.++=-|+++|
T Consensus 38 ~~i~~Il~G~d~-rllVIaGPCSied~eq~leyA~~Lk~~~~~~~d~l~~vmR~y~~KP 95 (346)
T 3tqk_A 38 KEIANIIHGNDD-RVAVVVGPCSIHDPAAAIEYATKLKEQVKKFHKDILIIMRVYFEKP 95 (346)
T ss_dssp HHHHHHHHTSSC-SEEEEEECSSCSCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCC
T ss_pred HHHHHHHcCCCC-CEEEEEecCccCCHHHHHHHHHHHHHHHhhhcccceEEeeecccCC
Confidence 333444443344 7889999 678899999999999998873 5677777777777
No 376
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=65.45 E-value=12 Score=32.45 Aligned_cols=45 Identities=9% Similarity=-0.031 Sum_probs=35.0
Q ss_pred HHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 181 LAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 181 lar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
.++.+.+.|+|+++|-=-. .- +.+.+.+..+.|.+ + ++||+|+-+
T Consensus 23 ~~~~~~~~GtD~i~vGGs~--gv-t~~~~~~~v~~ik~-~-~~Pvvlfp~ 67 (228)
T 3vzx_A 23 QLEILCESGTDAVIIGGSD--GV-TEDNVLRMMSKVRR-F-LVPCVLEVS 67 (228)
T ss_dssp HHHHHHTSSCSEEEECCCS--CC-CHHHHHHHHHHHTT-S-SSCEEEECS
T ss_pred HHHHHHHcCCCEEEECCcC--CC-CHHHHHHHHHHhhc-c-CCCEEEeCC
Confidence 3344578999999998522 22 78999999999998 7 899999644
No 377
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=65.43 E-value=19 Score=32.52 Aligned_cols=75 Identities=9% Similarity=0.064 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.+.++.+.+.++. ++++++=+ ++-+.++++++++..++.|++.+= -|. .+ .+ ++.++.|.+.+ +
T Consensus 176 ~~~~d~~~v~avR~a~g~-~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE--qP~--~~-~d---~~~~~~l~~~~-~ 245 (383)
T 3i4k_A 176 DPAEDTRRVAELAREVGD-RVSLRIDINARWDRRTALHYLPILAEAGVELFE--QPT--PA-DD---LETLREITRRT-N 245 (383)
T ss_dssp CHHHHHHHHHHHHHTTTT-TSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEE--SCS--CT-TC---HHHHHHHHHHH-C
T ss_pred CHHHHHHHHHHHHHHcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--CCC--Ch-hh---HHHHHHHHhhC-C
Confidence 467778889999998877 79999955 577899999999999999987554 343 12 11 45567788888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 246 iPIa~d 251 (383)
T 3i4k_A 246 VSVMAD 251 (383)
T ss_dssp CEEEES
T ss_pred CCEEec
Confidence 998863
No 378
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=65.38 E-value=15 Score=29.47 Aligned_cols=60 Identities=8% Similarity=-0.105 Sum_probs=40.5
Q ss_pred hhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 123 LRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 123 ~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
...++|.+.+-+.. ..++.++..++++.+.+.+...+++|++. +.++.|.++|+|++.+.
T Consensus 34 ~~~~~G~~~i~l~~----~~~~~~~~~~~~~~l~~~~~~~~v~v~v~----------~~~~~a~~~gad~v~l~ 93 (215)
T 1xi3_A 34 EALEGGATAIQMRI----KNAPTREMYEIGKTLRQLTREYDALFFVD----------DRVDVALAVDADGVQLG 93 (215)
T ss_dssp HHHHTTCSEEEECC----CSCCHHHHHHHHHHHHHHHHHTTCEEEEE----------SCHHHHHHHTCSEEEEC
T ss_pred HHHHCCCCEEEECC----CCCCHHHHHHHHHHHHHHHHHcCCeEEEc----------ChHHHHHHcCCCEEEEC
Confidence 34567776654432 45788888888877776554336888884 23467778899999874
No 379
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=65.22 E-value=78 Score=28.43 Aligned_cols=110 Identities=18% Similarity=0.082 Sum_probs=64.7
Q ss_pred hhHHhhhcCCCCEEEecccc---------CCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC----------------
Q psy9602 119 VGITLRMAPIIDQMVNGTTG---------EGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT---------------- 173 (239)
Q Consensus 119 ~~v~~~~~gg~glvV~GstG---------E~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~---------------- 173 (239)
..+..+-.+|.|+++.+.+. -...|..+|..+-++.+++.+......+++++.+.
T Consensus 40 ~~y~~rA~gG~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~ 119 (363)
T 3l5l_A 40 VHLAGLARGGAGLLVVEATAVAPEGRITPGCAGIWSDAHAQAFVPVVQAIKAAGSVPGIQIAHAGRKASANRPWEGDDHI 119 (363)
T ss_dssp HHHHHHHHTTCSEEEEEEEESSGGGCSSTTCCBCSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGCSBCCGGGTSSBC
T ss_pred HHHHHHHccCceEEEecceeeCccccCCCCcceecCHHHHHHHHHHHHHHHhcCCEEEEEeccCCccccccccccccccc
Confidence 44555667889987655431 12356778877777777776543234555533210
Q ss_pred -----------------------------C-------HHHHHHHHHHHHhCCCCEEEECC-----------CCCCCCC--
Q psy9602 174 -----------------------------C-------FQEVVELAKHAESLNVHAVLCLP-----------ELFFTPA-- 204 (239)
Q Consensus 174 -----------------------------S-------t~eAIelar~A~~aGAdaVlV~P-----------P~y~~~~-- 204 (239)
+ +++-.+-|+.|+++|+|+|-+-. |...+-.
T Consensus 120 ~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~ 199 (363)
T 3l5l_A 120 AADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDA 199 (363)
T ss_dssp CTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCST
T ss_pred cccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcc
Confidence 0 22334567888999999999974 3322110
Q ss_pred ---CHH----HHHHHHHHHHhhCC-CCcEEEE
Q psy9602 205 ---SVE----DLVDYLRDVGEAAP-ATPLFYY 228 (239)
Q Consensus 205 ---s~e----~iv~yf~~Vaeatp-dLPIiLY 228 (239)
+-+ -+.+-.++|.+++| +.||.+=
T Consensus 200 yGGslenR~r~~~eiv~aVr~avg~d~pV~vR 231 (363)
T 3l5l_A 200 YGGSFDNRSRFLLETLAAVREVWPENLPLTAR 231 (363)
T ss_dssp TSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEE
T ss_pred cCcCHHHHHHHHHHHHHHHHHHcCCCceEEEE
Confidence 222 24556667777764 5788774
No 380
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=65.05 E-value=17 Score=33.40 Aligned_cols=33 Identities=15% Similarity=0.090 Sum_probs=28.4
Q ss_pred CceEEEecCC-CCHHHHHHHHHHHHhCCCCEEEE
Q psy9602 163 GFTVMVQIGG-TCFQEVVELAKHAESLNVHAVLC 195 (239)
Q Consensus 163 rvpVIaGVg~-~St~eAIelar~A~~aGAdaVlV 195 (239)
..|+++++.. .+.+...++++.|+++|++++.+
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~i 179 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFV 179 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEE
Confidence 4699999865 67778889999999999999988
No 381
>2d69_A Ribulose bisphosphate carboxylase; alpha/beta barrel, structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.90A {Pyrococcus horikoshii} SCOP: c.1.14.1 d.58.9.1 PDB: 2cxe_A 2cwx_A
Probab=64.98 E-value=16 Score=34.55 Aligned_cols=80 Identities=13% Similarity=-0.092 Sum_probs=53.4
Q ss_pred HHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC
Q psy9602 116 MLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 116 ~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA 190 (239)
.++.-+.....||.+++=.= .-+.-.+...+||...+..+++ .++. +.-..+++++. .++.++.++.|.++|+
T Consensus 169 ~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe-~k~y~~NiTa~-~~em~~Ra~~a~e~G~ 246 (430)
T 2d69_A 169 EYAEIAYELWSGGIDLLKDDENFTSFPFNRFEERVRKLYRVRDRVEAETGE-TKEYLINITGP-VNIMEKRAEMVANEGG 246 (430)
T ss_dssp HHHHHHHHHHHTTCSEEECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSS-CCEEECBCCSS-HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCcEeECCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCC-ccEEEeecCCC-HHHHHHHHHHHHHcCC
Confidence 34343334455665655211 1245567788999875444433 4544 44556699987 9999999999999999
Q ss_pred CEEEECC
Q psy9602 191 HAVLCLP 197 (239)
Q Consensus 191 daVlV~P 197 (239)
.++|+-+
T Consensus 247 ~~~mvd~ 253 (430)
T 2d69_A 247 QYVMIDI 253 (430)
T ss_dssp CEEEEEH
T ss_pred CeEEEEe
Confidence 9999984
No 382
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=64.94 E-value=5.8 Score=32.93 Aligned_cols=46 Identities=11% Similarity=0.169 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhCCCCEEEECCCC---CCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 177 EVVELAKHAESLNVHAVLCLPEL---FFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 177 eAIelar~A~~aGAdaVlV~PP~---y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.+++++.+++.|++.+++++-. .+.. . -.+.++.+.+.+ ++||+.
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g-~---~~~~~~~l~~~~-~ipvia 198 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLGG-P---NLDLLAGVADRT-DAPVIA 198 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTSC-C---CHHHHHHHHTTC-SSCEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccCC-C---CHHHHHHHHHhC-CCCEEE
Confidence 57888999999999999987621 2222 1 255677777777 899875
No 383
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=64.91 E-value=13 Score=32.38 Aligned_cols=56 Identities=14% Similarity=-0.050 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 173 TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 173 ~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
.+.+.++++++...+.|||-+-|-.-.-... .++++.+....|.+.+ ++||.|--+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~v~-~~ee~~rvv~~i~~~~-~~pisIDT~ 77 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAVQD-KVSAMEWLVEVTQEVS-NLTLCLDST 77 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----C-HHHHHHHHHHHHHTTC-CSEEEEECS
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCCCC-hHHHHHHHHHHHHHhC-CCeEEEeCC
Confidence 5789999999999999999999986322222 5778888888888777 899988543
No 384
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=64.82 E-value=8.8 Score=35.09 Aligned_cols=66 Identities=14% Similarity=-0.011 Sum_probs=42.5
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCC----CCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPE----LFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP----~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
.++++.+.+.+ ++||+++- ..+ .+.++.+.++|+|+|.|..- .+..+ . -.+.+.++.++. +.|
T Consensus 214 ~~~i~~i~~~~---~~Pv~vkg-v~t----~e~a~~a~~aGad~I~vs~~gg~~~d~~~-~---~~~~l~~v~~~~-~~p 280 (380)
T 1p4c_A 214 WEALRWLRDLW---PHKLLVKG-LLS----AEDADRCIAEGADGVILSNHGGRQLDCAI-S---PMEVLAQSVAKT-GKP 280 (380)
T ss_dssp HHHHHHHHHHC---CSEEEEEE-ECC----HHHHHHHHHTTCSEEEECCGGGTSCTTCC-C---GGGTHHHHHHHH-CSC
T ss_pred HHHHHHHHHhc---CCCEEEEe-cCc----HHHHHHHHHcCCCEEEEcCCCCCcCCCCc-C---HHHHHHHHHHHc-CCe
Confidence 46777777776 47999842 123 46788999999999999431 11111 1 245566777777 567
Q ss_pred EEE
Q psy9602 225 LFY 227 (239)
Q Consensus 225 IiL 227 (239)
||.
T Consensus 281 Via 283 (380)
T 1p4c_A 281 VLI 283 (380)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 385
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=64.81 E-value=13 Score=35.26 Aligned_cols=80 Identities=11% Similarity=-0.048 Sum_probs=55.7
Q ss_pred HHHhhHHhhhcCCCCEEEe-ccccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC
Q psy9602 116 MLLVGITLRMAPIIDQMVN-GTTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 116 ~l~~~v~~~~~gg~glvV~-GstGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA 190 (239)
.++.-+.....||.+++=. =..+.-.++..+||...+..+++ .++. +.-..++|++. .++.++.+++|.++|+
T Consensus 172 ~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~rA~~eTGe-~k~y~~NiTa~-~~eM~~Ra~~a~e~G~ 249 (444)
T 3kdn_A 172 EFEKLAYDLLSNGADYMKDDENLTSPWYNRFEERAEIMAKIIDKVENETGE-KKTWFANITAD-LLEMEQRLEVLADLGL 249 (444)
T ss_dssp HHHHHHHHHHHTTCCEEECCTTCCSCTTSCHHHHHHHHHHHHHHHHHHHCC-CCEEEEECCSS-HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCceeecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhhCC-cceEEeecCCC-HHHHHHHHHHHHHcCC
Confidence 3444344445566666511 12234668889999887666654 3444 45567799998 9999999999999999
Q ss_pred CEEEECC
Q psy9602 191 HAVLCLP 197 (239)
Q Consensus 191 daVlV~P 197 (239)
+++|+-+
T Consensus 250 ~~~mvd~ 256 (444)
T 3kdn_A 250 KHAMVDV 256 (444)
T ss_dssp CEEEEEH
T ss_pred CEEEEcc
Confidence 9999874
No 386
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=64.76 E-value=16 Score=34.69 Aligned_cols=62 Identities=13% Similarity=0.172 Sum_probs=46.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+++|-++++.. .+.++.++...++|+|.+.+-..+ + ..+.+.+..+.+.+..|++||+.-|.
T Consensus 244 rl~V~aavg~~--~d~~era~aLveaGvd~I~Id~a~---g-~~~~v~~~i~~i~~~~~~~~vi~g~v 305 (511)
T 3usb_A 244 RLLVGAAVGVT--ADAMTRIDALVKASVDAIVLDTAH---G-HSQGVIDKVKEVRAKYPSLNIIAGNV 305 (511)
T ss_dssp CBCCEEEECSS--TTHHHHHHHHHHTTCSEEEEECSC---T-TSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred ceeeeeeeeec--cchHHHHHHHHhhccceEEecccc---c-chhhhhhHHHHHHHhCCCceEEeeee
Confidence 55555555533 356777888889999999997554 2 44778889999999987899998654
No 387
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=64.75 E-value=31 Score=31.29 Aligned_cols=75 Identities=9% Similarity=0.043 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ ++ ++.++.|.+.+ +
T Consensus 195 ~~~~d~~~v~avR~a~G~-~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE--eP~--~~---~d-~~~~~~l~~~~-~ 264 (383)
T 3toy_A 195 DLATDEAMIKGLRALLGP-DIALMLDFNQSLDPAEATRRIARLADYDLTWIE--EPV--PQ---EN-LSGHAAVRERS-E 264 (383)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE--CCS--CT---TC-HHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE--CCC--Cc---ch-HHHHHHHHhhc-C
Confidence 456778889999999877 89999955 577899999999999999877653 332 12 11 34577888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 265 iPIa~d 270 (383)
T 3toy_A 265 IPIQAG 270 (383)
T ss_dssp SCEEEC
T ss_pred CCEEeC
Confidence 999863
No 388
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=64.71 E-value=17 Score=30.92 Aligned_cols=58 Identities=5% Similarity=0.166 Sum_probs=36.9
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 164 FTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 164 vpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
..+++.....+.+...+..+...+.++|++++.++.. ++ ..++.+.+ . ++|++++|.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~----~~----~~~~~l~~-~-~iPvV~~~~~ 148 (332)
T 2hsg_A 91 YNIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNV----TE----EHVEELKK-S-PVPVVLAASI 148 (332)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTSCCSSCCEEECCSSC----CH----HHHHHHTT-S-SSCEEEESCC
T ss_pred CEEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCC----CH----HHHHHHHh-C-CCCEEEEccc
Confidence 4555555555566666777777778899998886431 22 23344433 4 7899988875
No 389
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=64.67 E-value=57 Score=34.29 Aligned_cols=100 Identities=14% Similarity=0.010 Sum_probs=66.0
Q ss_pred HHhhhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC----------CCCHHHHHHHHHHHHhCC
Q psy9602 121 ITLRMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG----------GTCFQEVVELAKHAESLN 189 (239)
Q Consensus 121 v~~~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg----------~~St~eAIelar~A~~aG 189 (239)
++...+.|.+.+ ++-+..+...+ ..+++.+.+. .. .+-..+.-. ..+.+..+++++.+.++|
T Consensus 633 v~~a~~~Gvd~irif~~~sd~~~~-----~~~~~~~~e~-g~-~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~G 705 (1150)
T 3hbl_A 633 VQESAKAGIDVFRIFDSLNWVDQM-----KVANEAVQEA-GK-ISEGTICYTGDILNPERSNIYTLEYYVKLAKELEREG 705 (1150)
T ss_dssp HHHHHHTTCCEEEEECTTCCGGGG-----HHHHHHHHHT-TC-EEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHhCCcCEEEEEeeCCHHHHH-----HHHHHHHHHH-hh-heeEEEeecccccChhhcCCCCHHHHHHHHHHHHHcC
Confidence 444555666655 77777776544 3444444443 22 121111111 155788999999999999
Q ss_pred CCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 190 VHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 190 AdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
|+.+.+-.-.... ++.++.+.++.+.+.. ++||-++-.
T Consensus 706 a~~i~l~Dt~G~~--~P~~~~~lv~~l~~~~-~~~i~~H~H 743 (1150)
T 3hbl_A 706 FHILAIKDMAGLL--KPKAAYELIGELKSAV-DLPIHLHTH 743 (1150)
T ss_dssp CSEEEEEETTCCC--CHHHHHHHHHHHHHHC-CSCEEEEEC
T ss_pred CCeeeEcCccCCC--CHHHHHHHHHHHHHhc-CCeEEEEeC
Confidence 9998877654432 7899999999999998 899877643
No 390
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=64.67 E-value=23 Score=32.65 Aligned_cols=73 Identities=18% Similarity=0.195 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++=+ ++-+.++++++++..++.|.+.+= -|. .+ +. ++.++.|.+.+ ++|
T Consensus 206 ~~d~e~v~avR~avG~-d~~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE--qP~--~~---~d-~~~~~~l~~~~-~iP 275 (422)
T 3tji_A 206 SNTVEMFHALREKYGW-KLHILHDVHERLFPQQAVQLAKQLEPFQPYFIE--DIL--PP---QQ-SAWLEQVRQQS-CVP 275 (422)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE--CCS--CG---GG-GGGHHHHHHHC-CCC
T ss_pred HHHHHHHHHHHHHcCC-CCEEEEECCCCCCHHHHHHHHHHHHhhCCCeEE--CCC--Ch---hh-HHHHHHHHhhC-CCC
Confidence 3446778888888877 89999955 577899999999999999877654 333 11 22 35578888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.=
T Consensus 276 Ia~d 279 (422)
T 3tji_A 276 LALG 279 (422)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 9863
No 391
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=64.57 E-value=28 Score=36.56 Aligned_cols=54 Identities=13% Similarity=0.095 Sum_probs=45.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 173 TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 173 ~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
.+.+..+++++.+.++||+.+.+..-..+. ++.++.+.++.|.+.. ++||-++-
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~--~P~~~~~lv~~l~~~~-~~~i~~H~ 759 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAGLL--KPAAAKVLFKALREAT-GLPIHFHT 759 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTCCC--CHHHHHHHHHHHHHHC-SSCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccCCc--CHHHHHHHHHHHHHhc-CCeEEEEE
Confidence 578889999999999999988887654432 6899999999999999 89987754
No 392
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=64.48 E-value=10 Score=31.17 Aligned_cols=56 Identities=18% Similarity=0.099 Sum_probs=33.6
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-C-HHHHHHHHHHHHhhCCCCcEEE
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-S-VEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-s-~e~iv~yf~~VaeatpdLPIiL 227 (239)
++|++..+.++ ++.|.+.|+|.+++.+.+..... . ...-.++++.+.+.. ++||+.
T Consensus 112 ~ig~sv~t~~~----~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia 169 (221)
T 1yad_A 112 HIGRSVHSLEE----AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI-SIPVIA 169 (221)
T ss_dssp EEEEEECSHHH----HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC-CSCEEE
T ss_pred EEEEEcCCHHH----HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC-CCCEEE
Confidence 34555455444 56778899999999763211100 0 112357888888887 789875
No 393
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=64.31 E-value=32 Score=27.64 Aligned_cols=70 Identities=9% Similarity=0.036 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC---------------------------
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF--------------------------- 201 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~--------------------------- 201 (239)
.+.++.+.+.... ++++-+|...+ .+.++.|.++|||.+ .-|.+.
T Consensus 49 ~~~i~~ir~~~~~-~~~ig~~~v~~-----~~~~~~a~~~Gad~i--v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a 120 (205)
T 1wa3_A 49 DTVIKELSFLKEK-GAIIGAGTVTS-----VEQCRKAVESGAEFI--VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKA 120 (205)
T ss_dssp HHHHHHTHHHHHT-TCEEEEESCCS-----HHHHHHHHHHTCSEE--ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHH
T ss_pred HHHHHHHHHHCCC-CcEEEecccCC-----HHHHHHHHHcCCCEE--EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHH
Q ss_pred ----------CCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 202 ----------TPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 202 ----------~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.+ .+..-.++++.+.+..|++||+.
T Consensus 121 ~~~Gad~vk~~~-~~~~g~~~~~~l~~~~~~~pvia 155 (205)
T 1wa3_A 121 MKLGHTILKLFP-GEVVGPQFVKAMKGPFPNVKFVP 155 (205)
T ss_dssp HHTTCCEEEETT-HHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHcCCCEEEEcC-ccccCHHHHHHHHHhCCCCcEEE
No 394
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=64.24 E-value=25 Score=32.12 Aligned_cols=75 Identities=8% Similarity=-0.012 Sum_probs=57.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ . + ++.++.|.+.+ +
T Consensus 173 ~~~~d~~~v~avR~a~g~-~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--qP~--~~-~--d-~~~~~~l~~~~-~ 242 (393)
T 4dwd_A 173 DIPGDIAKARAVRELLGP-DAVIGFDANNGYSVGGAIRVGRALEDLGYSWFE--EPV--QH-Y--H-VGAMGEVAQRL-D 242 (393)
T ss_dssp CHHHHHHHHHHHHHHHCT-TCCEEEECTTCCCHHHHHHHHHHHHHTTCSEEE--CCS--CT-T--C-HHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHHHhhCCCEEE--CCC--Cc-c--c-HHHHHHHHhhC-C
Confidence 567778899999999877 89999955 467899999999999999987664 333 22 1 1 46677888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 243 iPIa~d 248 (393)
T 4dwd_A 243 ITVSAG 248 (393)
T ss_dssp SEEEBC
T ss_pred CCEEec
Confidence 998753
No 395
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=64.20 E-value=11 Score=33.53 Aligned_cols=91 Identities=18% Similarity=0.069 Sum_probs=66.3
Q ss_pred CCCCEEEecc-cc-----C--CcCCCHHHHHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 127 PIIDQMVNGT-TG-----E--GVSMTTAERKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 127 gg~glvV~Gs-tG-----E--~~sLT~eER~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
|...+++.|+ .+ - ...+|.+|....++.++..+ ++||++=. +-.+..++.+.++...++||++|-+-
T Consensus 41 Gf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~---~~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iE 117 (287)
T 3b8i_A 41 GFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVA---RLPVIADADHGYGNALNVMRTVVELERAGIAALTIE 117 (287)
T ss_dssp TCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTC---SSCEEEECTTCSSSHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEc
Confidence 4455666665 22 1 24689999999999998876 46999833 22289999999999999999999986
Q ss_pred CCCC--------CCCCCHHHHHHHHHHHHhhC
Q psy9602 197 PELF--------FTPASVEDLVDYLRDVGEAA 220 (239)
Q Consensus 197 PP~y--------~~~~s~e~iv~yf~~Vaeat 220 (239)
--.+ -+..+.+++.+..+++.++-
T Consensus 118 D~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~ 149 (287)
T 3b8i_A 118 DTLLPAQFGRKSTDLICVEEGVGKIRAALEAR 149 (287)
T ss_dssp CBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHC
T ss_pred CCCCccccCCCCCCccCHHHHHHHHHHHHHcC
Confidence 4221 11126788999999998885
No 396
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=64.16 E-value=18 Score=32.42 Aligned_cols=74 Identities=15% Similarity=0.073 Sum_probs=55.7
Q ss_pred cCCCHHHHHHHHHHHHHHhcCCCceEEEecC--C--CCHHHHHHHHHHHH-hCCCCEEEECCCCCCCCCCHHHHHHHHHH
Q psy9602 141 VSMTTAERKLNLEAWMTEAKTHGFTVMVQIG--G--TCFQEVVELAKHAE-SLNVHAVLCLPELFFTPASVEDLVDYLRD 215 (239)
Q Consensus 141 ~sLT~eER~~li~~vve~~~G~rvpVIaGVg--~--~St~eAIelar~A~-~aGAdaVlV~PP~y~~~~s~e~iv~yf~~ 215 (239)
..+|.+|-....+.++..++ +.+|++-.. + .|.+++++.+.... ++||++|-+-- .+++.+-.+.
T Consensus 75 ~~vTldemi~h~~aV~r~~~--~~~vvaD~pfgsy~~s~~~a~~na~rl~~eaGa~aVklEd--------g~e~~~~I~a 144 (281)
T 1oy0_A 75 VPISIDELIPLVRGVVRGAP--HALVVADLPFGSYEAGPTAALAAATRFLKDGGAHAVKLEG--------GERVAEQIAC 144 (281)
T ss_dssp SSCCGGGTHHHHHHHHHHCT--TSEEEEECCTTSSTTCHHHHHHHHHHHHHTTCCSEEEEEB--------SGGGHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCC--CCeEEEECCCCcccCCHHHHHHHHHHHHHHhCCeEEEECC--------cHHHHHHHHH
Confidence 46889999999999998775 355666333 2 47899988655555 59999999872 3567888888
Q ss_pred HHhhCCCCcEE
Q psy9602 216 VGEAAPATPLF 226 (239)
Q Consensus 216 VaeatpdLPIi 226 (239)
+.++ ++|++
T Consensus 145 l~~a--gIpV~ 153 (281)
T 1oy0_A 145 LTAA--GIPVM 153 (281)
T ss_dssp HHHH--TCCEE
T ss_pred HHHC--CCCEE
Confidence 8887 69988
No 397
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=64.01 E-value=20 Score=33.83 Aligned_cols=80 Identities=11% Similarity=-0.003 Sum_probs=54.1
Q ss_pred HHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC
Q psy9602 116 MLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 116 ~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA 190 (239)
.++.-+.....||.+++=.= .-+.-.+...+||...+..+++ .++. +.-..++|+ .+.++.++.+++|+++|+
T Consensus 170 ~~a~~~ye~~~GGlDfiKDDE~l~~qpf~p~~eRv~~v~eai~ra~~eTGe-~k~y~~NiT-~~~~em~~Ra~~a~e~G~ 247 (425)
T 2zvi_A 170 DIKEQLRQQALGGVDLIKDDEIFFETGLAPFETRIAEGKQILKETYEQTGH-KTLYAVNLT-GRTADLKDKARRAAELGA 247 (425)
T ss_dssp HHHHHHHHHHHTTCSEEECCTTCCCSSSSCHHHHHHHHHHHHHHHHHHHSC-CCEEEEECC-SCGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCeeeCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhCC-cceeeCcCC-CCHHHHHHHHHHHHHhCC
Confidence 44443334455666665221 2245567888999875544433 4544 455567999 569999999999999999
Q ss_pred CEEEECC
Q psy9602 191 HAVLCLP 197 (239)
Q Consensus 191 daVlV~P 197 (239)
.++|+-+
T Consensus 248 ~~~mvd~ 254 (425)
T 2zvi_A 248 DALLFNV 254 (425)
T ss_dssp SEEEECG
T ss_pred CeEEEee
Confidence 9999884
No 398
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=64.00 E-value=20 Score=31.24 Aligned_cols=56 Identities=9% Similarity=0.005 Sum_probs=40.1
Q ss_pred CHHHHHHHHHHHH-hCCCCEEEECCC---CCC--CCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 174 CFQEVVELAKHAE-SLNVHAVLCLPE---LFF--TPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 174 St~eAIelar~A~-~aGAdaVlV~PP---~y~--~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+.+++++.++.+. +.|+.+|-+.+. +++ .+.+++.+...|+.+.+. ++||+++-.+
T Consensus 120 ~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~--~lpv~iH~~~ 181 (350)
T 2gwg_A 120 DPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVEL--EIPAMIHVST 181 (350)
T ss_dssp CGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHH--TCCEEECCCC
T ss_pred CHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHc--CCeEEECCCC
Confidence 3567888887776 789999977653 221 112667788888888775 8999997654
No 399
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=63.92 E-value=47 Score=28.94 Aligned_cols=97 Identities=11% Similarity=0.070 Sum_probs=61.6
Q ss_pred CEEEeccccCCc--CCCHHHHHHHHHHHHHHh-------------------cCCCceEEEecC--CCCHHHHHHHHHHHH
Q psy9602 130 DQMVNGTTGEGV--SMTTAERKLNLEAWMTEA-------------------KTHGFTVMVQIG--GTCFQEVVELAKHAE 186 (239)
Q Consensus 130 glvV~GstGE~~--sLT~eER~~li~~vve~~-------------------~G~rvpVIaGVg--~~St~eAIelar~A~ 186 (239)
=++.+=+..|+- .++.++|.++++.+.+.. .+ ...||+.-- ..+..+.++..+.++
T Consensus 91 iI~T~Rt~~EGG~~~~~~~~y~~ll~~~~~~~~~dyIDVEl~~~~~~~~~l~~-~~kiI~S~Hdf~~tp~el~~~~~~~~ 169 (259)
T 3l9c_A 91 VIFTLRTEKEGGNISLSNEDYLAIIRDIAALYQPDYIDFEYFSYRDVLEEMYD-FSNLILSYHNFEETPENLMEVFSELT 169 (259)
T ss_dssp EEEECCBGGGTCSBCCCHHHHHHHHHHHHHHHCCSEEEEEHHHHGGGGGGGTT-CSSEEEEEEESSCCCTTHHHHHHHHH
T ss_pred EEEEEeehhhCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECcCCHHHHHHHHh-cCeEEEEeccCCCCHHHHHHHHHHHH
Confidence 356676766655 489999999999876621 12 234565331 222338899999999
Q ss_pred hCCCCEEEECCCCCCCCCCHHHH---HHHHHHHHhhCCCCcEEEEeCC
Q psy9602 187 SLNVHAVLCLPELFFTPASVEDL---VDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 187 ~aGAdaVlV~PP~y~~~~s~e~i---v~yf~~VaeatpdLPIiLYN~P 231 (239)
+.|||-+=+.... . +.++. .++...+.+..++.|+|.|+.=
T Consensus 170 ~~GaDIvKia~~a---~-s~~Dvl~Ll~~~~~~~~~~~~~PlIa~~MG 213 (259)
T 3l9c_A 170 ALAPRVVKIAVMP---K-NEQDVLDLMNYTRGFKTLNPNQEYVTMSMS 213 (259)
T ss_dssp HTCCSEEEEEECC---S-SHHHHHHHHHHHHHHHHHCTTSEEEEEECT
T ss_pred HcCCCEEEEEecC---C-CHHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 9999987665322 1 44444 4444444333347999999874
No 400
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=63.68 E-value=22 Score=30.07 Aligned_cols=78 Identities=4% Similarity=0.005 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCC-CCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFT-PASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~-~~s~e~iv~yf~~Vaeatpd 222 (239)
+.+|-.++++.+.+. .++++..+...+..+.++.+....+ |...++-.+++.-. ........++.+.+.+.+ +
T Consensus 128 ~~~~~~~~~~~~~~~----g~~~i~~~a~~t~~e~~~~~~~~~~-g~v~~~s~~G~tG~~~~~~~~~~~~i~~v~~~~-~ 201 (262)
T 1rd5_A 128 PYVAAHSLWSEAKNN----NLELVLLTTPAIPEDRMKEITKASE-GFVYLVSVNGVTGPRANVNPRVESLIQEVKKVT-N 201 (262)
T ss_dssp BTTTHHHHHHHHHHT----TCEECEEECTTSCHHHHHHHHHHCC-SCEEEECSSCCBCTTSCBCTHHHHHHHHHHHHC-S
T ss_pred ChhhHHHHHHHHHHc----CCceEEEECCCCCHHHHHHHHhcCC-CeEEEecCCCCCCCCcCCCchHHHHHHHHHhhc-C
Confidence 335555666655443 4677778877666655544333222 43333323322211 102355778888888888 8
Q ss_pred CcEEE
Q psy9602 223 TPLFY 227 (239)
Q Consensus 223 LPIiL 227 (239)
+||++
T Consensus 202 ~pI~v 206 (262)
T 1rd5_A 202 KPVAV 206 (262)
T ss_dssp SCEEE
T ss_pred CeEEE
Confidence 99886
No 401
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=63.59 E-value=39 Score=30.89 Aligned_cols=79 Identities=14% Similarity=0.028 Sum_probs=52.4
Q ss_pred HHhhhcCCCCEEEecccc---------CCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC------------------
Q psy9602 121 ITLRMAPIIDQMVNGTTG---------EGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT------------------ 173 (239)
Q Consensus 121 v~~~~~gg~glvV~GstG---------E~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~------------------ 173 (239)
+..+-.+|.|+++.+.+. -...|..+|...-++.+++.+......+++++.+.
T Consensus 58 y~~rA~GG~GLIite~~~V~~~g~~~~~~~gi~~d~~i~~~k~l~davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~ 137 (400)
T 4gbu_A 58 YTQRAQRPGTMIITEGAFISPQAGGYDNAPGVWSEEQMVEWTKIFNAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDS 137 (400)
T ss_dssp HHHHTCSTTCEEECSCEESSGGGCCCTTSCBSSSHHHHHHHHHHHHHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEE
T ss_pred HHHHHcCCeEEEEEcCeEECccccCCCCCCccCCHHHHHHHHHHHHHHHhcCCceEEeeeecCcccCccccccCCCcccC
Confidence 445567888887665431 13456678887777877777655456777776432
Q ss_pred -------------------------CHH-------HHHHHHHHHHhCCCCEEEECCCC
Q psy9602 174 -------------------------CFQ-------EVVELAKHAESLNVHAVLCLPEL 199 (239)
Q Consensus 174 -------------------------St~-------eAIelar~A~~aGAdaVlV~PP~ 199 (239)
+.+ +-.+-|+.|+++|+|+|-|..-|
T Consensus 138 ~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEIH~Ah 195 (400)
T 4gbu_A 138 ASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAAKNSIAAGADGVEIHSAN 195 (400)
T ss_dssp SCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCT
T ss_pred ccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHhcCcCeeeecccc
Confidence 222 33456788999999999997655
No 402
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=63.48 E-value=68 Score=28.61 Aligned_cols=113 Identities=15% Similarity=0.110 Sum_probs=65.4
Q ss_pred hhHHhhhcCCCCEEEecccc-----C----CcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCC----------------
Q psy9602 119 VGITLRMAPIIDQMVNGTTG-----E----GVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGT---------------- 173 (239)
Q Consensus 119 ~~v~~~~~gg~glvV~GstG-----E----~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~---------------- 173 (239)
..+..+-.+|.|+++.+.+. - ...|..+|..+-++.+++.+......+++++.+.
T Consensus 41 ~~y~~rA~gg~Glii~e~~~v~~~g~~~~~~~~i~~d~~i~~~~~~~~~vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~ 120 (349)
T 3hgj_A 41 LHYPTRALGGVGLILVEATAVEPLGRISPYDLGIWSEDHLPGLKELARRIREAGAVPGIQLAHAGRKAGTARPWEGGKPL 120 (349)
T ss_dssp HHHHHHHHTTCSEEEEEEEESSGGGCSSTTSCBCSSGGGHHHHHHHHHHHHHTTCEEEEEEECCGGGCCBCCGGGTCCBC
T ss_pred HHHHHHhcCCceEEEecceeecccccCCCCcCccCcHHHHHHHHHHHHHHHhCCCeEEEEeccCCccccccccccccccC
Confidence 34555567889987665431 1 2345667766666666665543234555543210
Q ss_pred ----------------------C-------HHHHHHHHHHHHhCCCCEEEECCCC-----------CCCCC-----CH--
Q psy9602 174 ----------------------C-------FQEVVELAKHAESLNVHAVLCLPEL-----------FFTPA-----SV-- 206 (239)
Q Consensus 174 ----------------------S-------t~eAIelar~A~~aGAdaVlV~PP~-----------y~~~~-----s~-- 206 (239)
+ .++-.+-|+.|+++|+|+|-|-.-+ ..+-. +-
T Consensus 121 ~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslen 200 (349)
T 3hgj_A 121 GWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLEN 200 (349)
T ss_dssp CCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH
T ss_pred CCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHH
Confidence 1 2344456788899999999987643 21110 21
Q ss_pred --HHHHHHHHHHHhhCC-CCcEEEEeCC
Q psy9602 207 --EDLVDYLRDVGEAAP-ATPLFYYHIP 231 (239)
Q Consensus 207 --e~iv~yf~~Vaeatp-dLPIiLYN~P 231 (239)
.-+.+-.++|.+++| +.||.+==.|
T Consensus 201 R~r~~~eiv~aVR~avG~d~pV~vRls~ 228 (349)
T 3hgj_A 201 RMRFPLQVAQAVREVVPRELPLFVRVSA 228 (349)
T ss_dssp HHHHHHHHHHHHHHHSCTTSCEEEEEES
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 234566677777775 6888874444
No 403
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=63.46 E-value=49 Score=30.41 Aligned_cols=54 Identities=13% Similarity=0.062 Sum_probs=40.6
Q ss_pred CHHHHHHHHHHHHhCCCCEEEECCC-CCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 174 CFQEVVELAKHAESLNVHAVLCLPE-LFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 174 St~eAIelar~A~~aGAdaVlV~PP-~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+-+.+-.++..+...|++-.++.|| -|..+ +++++..+++++.. +..+-+++.|
T Consensus 205 ~nrva~Sl~~~~~~~G~~v~~~~P~~~~~~~---~~~~~~~~~~a~~~-g~~v~~~~d~ 259 (359)
T 1zq6_A 205 NTAVANSALTIATRMGMDVTLLCPTPDYILD---ERYMDWAAQNVAES-GGSLQVSHDI 259 (359)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEECSSGGGCCC---HHHHHHHHHHHHHH-SCEEEEECCH
T ss_pred ccchHHHHHHHHHHcCCEEEEEcCccccCCC---HHHHHHHHHHHHHc-CCeEEEECCH
Confidence 4677888999999999999999988 66554 67777777777666 5666665554
No 404
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=63.44 E-value=29 Score=30.11 Aligned_cols=74 Identities=14% Similarity=0.243 Sum_probs=46.5
Q ss_pred ccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHH
Q psy9602 135 GTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDY 212 (239)
Q Consensus 135 GstGE~~sLT~eER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~y 212 (239)
|..|.-+.=..-|+.+-++..++..+- ++++.+ ||+..+ ++.+.++|||.+++-...+-.+ ++++.++-
T Consensus 168 GfgGQ~fi~~~l~KI~~lr~~~~~~~~-~~~I~VDGGI~~~t-------i~~~~~aGAD~~V~GSaIf~a~-dp~~~i~~ 238 (246)
T 3inp_A 168 GFGGQKFIPAMLDKAKEISKWISSTDR-DILLEIDGGVNPYN-------IAEIAVCGVNAFVAGSAIFNSD-SYKQTIDK 238 (246)
T ss_dssp TC--CCCCTTHHHHHHHHHHHHHHHTS-CCEEEEESSCCTTT-------HHHHHTTTCCEEEESHHHHTSS-CHHHHHHH
T ss_pred CCCCcccchHHHHHHHHHHHHHHhcCC-CeeEEEECCcCHHH-------HHHHHHcCCCEEEEehHHhCCC-CHHHHHHH
Confidence 666765554555676666766665433 566655 666443 5677899999999996555445 66666665
Q ss_pred HHHHH
Q psy9602 213 LRDVG 217 (239)
Q Consensus 213 f~~Va 217 (239)
+++..
T Consensus 239 l~~~i 243 (246)
T 3inp_A 239 MRDEL 243 (246)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 405
>1ykw_A Rubisco-like protein; beta-alpha-barrel, unknown function; 2.00A {Chlorobaculum tepidum} SCOP: c.1.14.1 d.58.9.1 PDB: 1tel_A
Probab=63.44 E-value=16 Score=34.60 Aligned_cols=102 Identities=13% Similarity=-0.013 Sum_probs=62.8
Q ss_pred HHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHH----HHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCC
Q psy9602 116 MLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWM----TEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 116 ~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vv----e~~~G~rvpVIaGVg~~St~eAIelar~A~~aGA 190 (239)
.++.-+.....||.+++=.= .-+.-.++..+||...+..++ +.++. +.-..++|+ .+.++.++.+++|+++|+
T Consensus 181 ~~a~~~ye~~~GGlDfiKDDE~~~~qpf~p~~eR~~~v~eai~~a~~eTGe-~k~~~~NiT-~~~~em~~Ra~~a~e~G~ 258 (435)
T 1ykw_A 181 EFAEIAYQSWLGGLDIAKDDEMLADVTWSSIEERAAHLGKARRKAEAETGE-PKIYLANIT-DEVDSLMEKHDVAVRNGA 258 (435)
T ss_dssp HHHHHHHHHHHTTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSS-CCEEEEECC-CCGGGHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCcccCccccCCCCCCcHHHHHHHHHHHHHHHHHhhCC-cceeecccC-CCHHHHHHHHHHHHHcCC
Confidence 34333333445665555211 124556778899986543333 34554 455667999 599999999999999999
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 191 HAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 191 daVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++|+-+-. ... .. ...+++.. ++||.++
T Consensus 259 ~~~mvd~~~-~G~---~a----~~~l~~~~-~l~lh~H 287 (435)
T 1ykw_A 259 NALLINALP-VGL---SA----VRMLSNYT-QVPLIGH 287 (435)
T ss_dssp CEEEEEHHH-HCH---HH----HHHHHHHC-SSCEEEE
T ss_pred CEEEEeccc-cCh---HH----HHHHHhcC-CCeEEEc
Confidence 999997311 111 11 23333445 7887776
No 406
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=63.40 E-value=58 Score=27.88 Aligned_cols=74 Identities=12% Similarity=0.179 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCC-CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGT-CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~-St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.++++.+.+.+...+..+++..... +.+...+..+...+.++|++++.+|. +.+... ...+ ... ++|+++
T Consensus 77 ~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~~vdGiIi~~~~-----~~~~~~--~~~~-~~~-~iPvV~ 147 (349)
T 1jye_A 77 SQIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPL-----DDQDAI--AVEA-ACT-NVPALF 147 (349)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCC-----CHHHHH--HHHH-HTT-TSCEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCCcHHHHHHHHHHHHHCCCCEEEEecCC-----CChhHH--HHHH-hhC-CCCEEE
Confidence 3444444443332245555544433 35555667777777889998887553 222221 1222 234 789888
Q ss_pred EeCC
Q psy9602 228 YHIP 231 (239)
Q Consensus 228 YN~P 231 (239)
+|.+
T Consensus 148 i~~~ 151 (349)
T 1jye_A 148 LDVS 151 (349)
T ss_dssp SSSC
T ss_pred Eccc
Confidence 8764
No 407
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=63.35 E-value=15 Score=35.41 Aligned_cols=105 Identities=10% Similarity=-0.023 Sum_probs=65.5
Q ss_pred HHHhhHHhhhcCCCCEEEec-cccCCcCCCHHHHHHHHHHHHHH----hcCCCceEEEecCCCCHHHHHHHHHHHHhCCC
Q psy9602 116 MLLVGITLRMAPIIDQMVNG-TTGEGVSMTTAERKLNLEAWMTE----AKTHGFTVMVQIGGTCFQEVVELAKHAESLNV 190 (239)
Q Consensus 116 ~l~~~v~~~~~gg~glvV~G-stGE~~sLT~eER~~li~~vve~----~~G~rvpVIaGVg~~St~eAIelar~A~~aGA 190 (239)
.++.-+.....||.+++=.= .-+.-.+...+||..++..+++. ++. +.-..++|++.+.++.++.+++|.++|+
T Consensus 193 ~~a~~~ye~~~GGlDfIKDDE~l~~Qpf~p~~eRv~~v~eai~rA~~eTGe-~K~~~~NiTa~~~~eM~~Ra~~a~e~G~ 271 (493)
T 4f0h_A 193 NYGRVVYEALKGGLDFVKDDENINSQPFMRWRERYLFVMEAVNKAAAATGE-VKGHYLNVTAATMEEMYARAQLAKELGS 271 (493)
T ss_dssp HHHHHHHHHHHHTCSEEECCTTCSSBTTBCHHHHHHHHHHHHHHHHHHHSS-CCEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcCCCccccccccCCCCCccHHHHHHHHHHHHHHHHHhHCC-cceEEeecCCCCHHHHHHHHHHHHhcCC
Confidence 34333333445565555110 22345678899998876666543 433 4556679999999999999999999999
Q ss_pred CEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 191 HAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 191 daVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++|+-+ .... . ........++.. ++||..+
T Consensus 272 ~~vmvd~--~~G~---~-a~~~La~~~r~~-~l~LH~H 302 (493)
T 4f0h_A 272 VIIMIDL--VIGY---T-AIQTMAKWARDN-DMILHLH 302 (493)
T ss_dssp SEEEEEG--GGCH---H-HHHHHHHHHHHH-TCEEEEE
T ss_pred CeEEEec--cccc---c-hhHHHHHHHHHc-CceEEec
Confidence 9999863 1122 1 223333344444 6777554
No 408
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=63.26 E-value=5.8 Score=33.37 Aligned_cols=51 Identities=10% Similarity=-0.057 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 176 QEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.+.+++++.+++.|++.+.+........ ....-.++.+.|++++ ++||++=
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~-~~~~~~~~i~~i~~~~-~ipvi~~ 85 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGT-KSGYDTEMIRFVRPLT-TLPIIAS 85 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTC-SSCCCHHHHHHHGGGC-CSCEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccC-CCcccHHHHHHHHHhC-CCCEEEe
Confidence 4678999999999999999865422111 0111256778999998 8999873
No 409
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=63.24 E-value=33 Score=31.20 Aligned_cols=73 Identities=11% Similarity=0.172 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ +. ++.++.|.+.+ ++|
T Consensus 185 ~~d~~~v~avR~a~G~-d~~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE--qP~--~~---~~-~~~~~~l~~~~-~iP 254 (401)
T 3sbf_A 185 DNTLTMFKSLREKYGN-QFHILHDVHERLFPNQAIQFAKEVEQYKPYFIE--DIL--PP---NQ-TEWLDNIRSQS-SVS 254 (401)
T ss_dssp HHHHHHHHHHHHHHTT-SSEEEEECTTCSCHHHHHHHHHHHGGGCCSCEE--CSS--CT---TC-GGGHHHHHTTC-CCC
T ss_pred HHHHHHHHHHHHHcCC-CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--CCC--Ch---hH-HHHHHHHHhhC-CCC
Confidence 3446778888888877 89999955 567899999999999999987654 232 11 11 34578888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 255 Ia~d 258 (401)
T 3sbf_A 255 LGLG 258 (401)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 8863
No 410
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=63.04 E-value=19 Score=31.89 Aligned_cols=63 Identities=17% Similarity=0.141 Sum_probs=45.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC-----CCC---CCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL-----FFT---PASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~-----y~~---~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+.-++.++.... .|+.++++|+|++++.... .+. +.+-++++.|-+.|++.+ +.|+++=|.|.
T Consensus 17 ~~i~~~tayD~~------sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~-~~~~vvaD~pf 87 (264)
T 1m3u_A 17 KRFATITAYDYS------FAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGA-PNCLLLADLPF 87 (264)
T ss_dssp CCEEEEECCSHH------HHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHC-TTSEEEEECCT
T ss_pred CcEEEEeCcCHH------HHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhC-CCCcEEEECCC
Confidence 344555666543 4667778899999995322 111 127899999999999999 78888899985
No 411
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=62.99 E-value=11 Score=36.58 Aligned_cols=55 Identities=11% Similarity=-0.064 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 174 CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 174 St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
+.+.+++.++...+.|||-+-|-|-.-... .++++.+....|.+.+ ++||.|--+
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIgpg~~~v~-~~ee~~rvv~~i~~~~-~vpisIDT~ 392 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVNFGIESQI-DVRYVEKIVQTLPYVS-NVPLSLDIQ 392 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECSSGGGS-CHHHHHHHHHHHHHHT-CSCEEEECC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCC-HHHHHHHHHHHHHhhC-CceEEEeCC
Confidence 468999999999999999999996332233 7899999999998888 899998543
No 412
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=62.94 E-value=36 Score=30.86 Aligned_cols=74 Identities=9% Similarity=0.015 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEE-Eec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVM-VQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVI-aGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
..++=.+.++.+.+.++. +++++ +=. ++-+.++++++++..++.|.+..++--|.. + . . ++.++.|.+++
T Consensus 168 ~~~~d~~~v~avR~a~g~-~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~--~-~--d-~~~~~~l~~~~- 239 (391)
T 3gd6_A 168 NLDADEEFLSRVKEEFGS-RVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIESPAP--R-N--D-FDGLYQLRLKT- 239 (391)
T ss_dssp CHHHHHHHHHHHHHHHGG-GCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEECCSC--T-T--C-HHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHcCC-CCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceecCCCC--h-h--h-HHHHHHHHHHc-
Confidence 467778889999999877 78998 744 567899999999999999983334445542 2 1 1 46678888888
Q ss_pred CCcE
Q psy9602 222 ATPL 225 (239)
Q Consensus 222 dLPI 225 (239)
++||
T Consensus 240 ~iPI 243 (391)
T 3gd6_A 240 DYPI 243 (391)
T ss_dssp SSCE
T ss_pred CCCc
Confidence 7998
No 413
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=62.89 E-value=33 Score=31.21 Aligned_cols=75 Identities=16% Similarity=0.162 Sum_probs=56.7
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
..++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ ++ ++.++.|.+.+ +
T Consensus 201 ~~~~d~~~v~avR~a~G~-~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE--qP~--~~---~d-~~~~~~l~~~~-~ 270 (390)
T 3ugv_A 201 DPAVDIETAEAVWDAVGR-DTALMVDFNQGLDMAEAMHRTRQIDDLGLEWIE--EPV--VY---DN-FDGYAQLRHDL-K 270 (390)
T ss_dssp SHHHHHHHHHHHHHHHCT-TSEEEEECTTCCCHHHHHHHHHHHTTSCCSEEE--CCS--CT---TC-HHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHHHHHHhhCCCEEE--CCC--Cc---cc-HHHHHHHHHhc-C
Confidence 456778889999999877 89999855 577899999999999999877553 332 12 11 34567888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 271 iPIa~d 276 (390)
T 3ugv_A 271 TPLMIG 276 (390)
T ss_dssp SCEEEC
T ss_pred CCEEeC
Confidence 999863
No 414
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=62.73 E-value=37 Score=30.66 Aligned_cols=73 Identities=10% Similarity=-0.056 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecC-CC--CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHh-hCC
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQIG-GT--CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGE-AAP 221 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGVg-~~--St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vae-atp 221 (239)
++=.++++.+.+.++. ++++++-+. +. +.++++++++..++.|++.+ --|. .+ . =++.++.|.+ .+
T Consensus 177 ~~~~e~v~avr~a~G~-d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~-~---d~~~~~~l~~~~~- 246 (401)
T 2hzg_A 177 AADADQIMAAREGLGP-DGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWL--EEPF--DA-G---ALAAHAALAGRGA- 246 (401)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEE--ECCS--CT-T---CHHHHHHHHTTCC-
T ss_pred HHHHHHHHHHHHHhCC-CCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEE--ECCC--Cc-c---CHHHHHHHHhhCC-
Confidence 5556888888888876 799998663 55 78999999999999998864 3443 22 1 2566778888 78
Q ss_pred CCcEEEE
Q psy9602 222 ATPLFYY 228 (239)
Q Consensus 222 dLPIiLY 228 (239)
++||+.-
T Consensus 247 ~iPI~~d 253 (401)
T 2hzg_A 247 RVRIAGG 253 (401)
T ss_dssp SSEEEEC
T ss_pred CCCEEec
Confidence 7998863
No 415
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=62.64 E-value=16 Score=33.54 Aligned_cols=90 Identities=14% Similarity=0.197 Sum_probs=64.6
Q ss_pred hcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEe---------------cCC-------------CCH
Q psy9602 125 MAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQ---------------IGG-------------TCF 175 (239)
Q Consensus 125 ~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaG---------------Vg~-------------~St 175 (239)
-+.|++++ ..+.. +=|...|+...+..+-.+++||+= +++ .+.
T Consensus 154 A~AGAdiVAPSdMM--------DGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~GDRktYQmdpaN~ 225 (323)
T 1l6s_A 154 AAAGADFIAPSAAM--------DGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKSYQMNPMNR 225 (323)
T ss_dssp HHHTCSEEEECSCC--------TTHHHHHHHHHHHTTCTTCEEBCCCEEBCCSCCHHHHHHHTCCCSSCCTTTSBCTTCH
T ss_pred HHcCCCeEeccccc--------ccHHHHHHHHHHhCCCCCceeeehhHHHhHHhhHHHHHHhcCCCCCCccccCCCCCCH
Confidence 45566655 44432 568888888888765436777752 111 258
Q ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 176 QEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
++|+..+..=.+-|||-+||=|-..| ++-.+.+.+.+ ++|+..||..
T Consensus 226 ~EAlre~~~Di~EGAD~vMVKPal~Y--------LDIi~~vk~~~-~~P~aaYqVS 272 (323)
T 1l6s_A 226 REAIRESLLDEAQGADCLMVKPAGAY--------LDIVRELRERT-ELPIGAYQVS 272 (323)
T ss_dssp HHHHHHHHHHHHTTCSBEEEESCTTC--------HHHHHHHHTTC-SSCEEEEECH
T ss_pred HHHHHHHHhhHHhCCceEEEecCcch--------hHHHHHHHHhc-CCCeEEEEcC
Confidence 89999998888889999999985543 45567888889 8999999964
No 416
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=62.11 E-value=9.9 Score=34.80 Aligned_cols=49 Identities=12% Similarity=0.088 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFF 201 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~ 201 (239)
-.++++.+.+.+++ ++|||+.=+=.+.+++.+... +|||+|++..+..+
T Consensus 284 a~~~v~~i~~~v~~-~ipvI~~GGI~s~~da~~~l~----~GAd~V~vgra~l~ 332 (367)
T 3zwt_A 284 STQTIREMYALTQG-RVPIIGVGGVSSGQDALEKIR----AGASLVQLYTALTF 332 (367)
T ss_dssp HHHHHHHHHHHTTT-CSCEEEESSCCSHHHHHHHHH----HTCSEEEESHHHHH
T ss_pred HHHHHHHHHHHcCC-CceEEEECCCCCHHHHHHHHH----cCCCEEEECHHHHh
Confidence 35788888888887 899997555567777777664 59999999988743
No 417
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=61.94 E-value=16 Score=32.64 Aligned_cols=45 Identities=11% Similarity=0.000 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF 200 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y 200 (239)
..++..+++.+ ++|||+.=+-.+-.++++ |..+|||+|++--|+.
T Consensus 199 ~~~l~~v~~~~---~ipVIa~GGI~~g~Dv~k----alalGAdaV~iGr~~l 243 (336)
T 1ypf_A 199 LAALRWCAKAA---SKPIIADGGIRTNGDVAK----SIRFGATMVMIGSLFA 243 (336)
T ss_dssp HHHHHHHHHTC---SSCEEEESCCCSTHHHHH----HHHTTCSEEEESGGGT
T ss_pred HHHHHHHHHHc---CCcEEEeCCCCCHHHHHH----HHHcCCCEEEeChhhh
Confidence 44555555554 689999433344555554 3457999999998876
No 418
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=61.77 E-value=4.6 Score=36.10 Aligned_cols=64 Identities=3% Similarity=0.035 Sum_probs=42.1
Q ss_pred CceEEEecC-CCCHHHHHHHHHHHHhCCCCEE----EE--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 163 GFTVMVQIG-GTCFQEVVELAKHAESLNVHAV----LC--------LPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 163 rvpVIaGVg-~~St~eAIelar~A~~aGAdaV----lV--------~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
++-||+|.. -.|.+.++++|+.++++|++++ +- ..|+.|+...-++=+..++++++.. ++|++-
T Consensus 18 ~~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l~~~~~~~-Glp~~t 94 (292)
T 1o60_A 18 PFVLFGGMNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKDTF-GVKIIT 94 (292)
T ss_dssp CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH-CCEEEE
T ss_pred ceEEEEecCCccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHHHHHHHHc-CCcEEE
Confidence 466888875 4589999999999999875543 22 1122222113344556678888888 899874
No 419
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=61.72 E-value=6.7 Score=35.75 Aligned_cols=50 Identities=12% Similarity=-0.013 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCC-CCCCC
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPE-LFFTP 203 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP-~y~~~ 203 (239)
.+++..+.+.+++ ++|||+.=+=.+.+++++... +|||+|++..+ .|..|
T Consensus 262 ~~~v~~i~~~~~~-~ipIIg~GGI~s~~da~~~l~----aGAd~V~igra~~~~gP 312 (345)
T 3oix_A 262 LANVHAFYKRLNP-SIQIIGTGGVXTGRDAFEHIL----CGASMVQIGTALHQEGP 312 (345)
T ss_dssp HHHHHHHHTTSCT-TSEEEEESSCCSHHHHHHHHH----HTCSEEEESHHHHHHCT
T ss_pred HHHHHHHHHHcCC-CCcEEEECCCCChHHHHHHHH----hCCCEEEEChHHHhcCh
Confidence 5777888888876 799987666677788877763 69999999988 44444
No 420
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=61.61 E-value=53 Score=28.53 Aligned_cols=102 Identities=14% Similarity=0.061 Sum_probs=68.5
Q ss_pred hHHhhhcCCCC-E--EEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 120 GITLRMAPIID-Q--MVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 120 ~v~~~~~gg~g-l--vV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
.++..++.|.+ + +++ .|+..+=..++..+-++.+++.+++.-++||+=++-.+-++.++.++.|.++|||.|=..
T Consensus 100 Ea~~Ai~~GAdEIDmViN--ig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGADfVKTS 177 (239)
T 3ngj_A 100 ETKVAVEQGAEEVDMVIN--IGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAEYVKTS 177 (239)
T ss_dssp HHHHHHHTTCSEEEEECC--HHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HHHHHHHcCCCEEEEEee--hHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcCEEECC
Confidence 45556666664 3 333 334333345667777788888876523788887777888888889999999999999988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 197 PELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 197 PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
.-+.....+.+++..+-+.+.. +++|-
T Consensus 178 TGf~~ggAt~~dv~lmr~~vg~---~v~VK 204 (239)
T 3ngj_A 178 TGFGTHGATPEDVKLMKDTVGD---KALVK 204 (239)
T ss_dssp CSSSSCCCCHHHHHHHHHHHGG---GSEEE
T ss_pred CCCCCCCCCHHHHHHHHHhhCC---CceEE
Confidence 6553222277777776665532 45554
No 421
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=61.51 E-value=12 Score=32.34 Aligned_cols=80 Identities=14% Similarity=0.093 Sum_probs=48.9
Q ss_pred EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC----CC---
Q psy9602 133 VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTP----AS--- 205 (239)
Q Consensus 133 V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~----~s--- 205 (239)
+.|.||.-..+. ++-.++++.+.+.. ++||++|.|-.+.+++. .+..+|||+++|-.-.+-.. .+
T Consensus 179 ~~G~tG~~~~~~-~~~~~~i~~lr~~~---~~pi~vggGI~t~e~~~----~~~~agAD~vVVGSai~~~~~~~~~~~~~ 250 (268)
T 1qop_A 179 RSGVTGAENRGA-LPLHHLIEKLKEYH---AAPALQGFGISSPEQVS----AAVRAGAAGAISGSAIVKIIEKNLASPKQ 250 (268)
T ss_dssp SSSCCCSSSCC---CCHHHHHHHHHTT---CCCEEEESSCCSHHHHH----HHHHTTCSEEEECHHHHHHHHHTTTCHHH
T ss_pred cCCcCCCccCCC-chHHHHHHHHHhcc---CCcEEEECCCCCHHHHH----HHHHcCCCEEEEChHHhhhHhhcccCchH
Confidence 458899866654 33345556666654 47999998886665543 44568999999986432110 01
Q ss_pred -HHHHHHHHHHHHhhC
Q psy9602 206 -VEDLVDYLRDVGEAA 220 (239)
Q Consensus 206 -~e~iv~yf~~Vaeat 220 (239)
.+.+.+|.+.+..+.
T Consensus 251 ~~~~~~~~~~~l~~~~ 266 (268)
T 1qop_A 251 MLAELRSFVSAMKAAS 266 (268)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 135667777765543
No 422
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=61.34 E-value=17 Score=33.85 Aligned_cols=34 Identities=12% Similarity=0.108 Sum_probs=27.9
Q ss_pred CceEEEec--C-CCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 163 GFTVMVQI--G-GTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 163 rvpVIaGV--g-~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
.+-||+.+ . ..|.+.+.++++.|+++|||+|=..
T Consensus 28 ~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ 64 (385)
T 1vli_A 28 PVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQ 64 (385)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeee
Confidence 46788844 3 3489999999999999999999764
No 423
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=61.34 E-value=27 Score=28.72 Aligned_cols=70 Identities=13% Similarity=0.141 Sum_probs=37.6
Q ss_pred ccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHH
Q psy9602 135 GTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDY 212 (239)
Q Consensus 135 GstGE~~sLT~eER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~y 212 (239)
|.+|..+.-+.-++.+-++......+. .+|+++ ||+..+. ..+.++|||++.+....+-.+ ++.+..+-
T Consensus 152 g~~g~~~~~~~~~~i~~l~~~~~~~~~-~~pi~v~GGI~~~n~-------~~~~~aGad~vvvgSaI~~a~-dp~~a~~~ 222 (230)
T 1rpx_A 152 GFGGQSFIESQVKKISDLRKICAERGL-NPWIEVDGGVGPKNA-------YKVIEAGANALVAGSAVFGAP-DYAEAIKG 222 (230)
T ss_dssp TCSSCCCCTTHHHHHHHHHHHHHHHTC-CCEEEEESSCCTTTH-------HHHHHHTCCEEEESHHHHTSS-CHHHHHHH
T ss_pred CCCCccccHHHHHHHHHHHHHHHhcCC-CceEEEECCCCHHHH-------HHHHHcCCCEEEEChhhhCCC-CHHHHHHH
Confidence 555654433333444444444433222 578766 5554333 334455999999998766554 55554444
Q ss_pred H
Q psy9602 213 L 213 (239)
Q Consensus 213 f 213 (239)
+
T Consensus 223 l 223 (230)
T 1rpx_A 223 I 223 (230)
T ss_dssp H
T ss_pred H
Confidence 3
No 424
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=60.87 E-value=36 Score=30.58 Aligned_cols=75 Identities=9% Similarity=-0.022 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhC-CCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESL-NVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~a-GAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
+.++=.++++.+.+.++. ++++++-. ++.+.++++++++..++. |.+. +--|. .+ . -++.++.|.+.+
T Consensus 166 ~~~~d~e~v~avR~a~G~-d~~l~vDan~~~~~~~a~~~~~~l~~~~~i~~--iEqP~--~~-~---d~~~~~~l~~~~- 235 (382)
T 2gdq_A 166 SFKEDVRHINALQHTAGS-SITMILDANQSYDAAAAFKWERYFSEWTNIGW--LEEPL--PF-D---QPQDYAMLRSRL- 235 (382)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSEEEEECTTCCCHHHHHTTHHHHTTCSCEEE--EECCS--CS-S---CHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHHHHhhCC-CCEEEEECCCCCCHHHHHHHHHHHhhccCCeE--EECCC--Cc-c---cHHHHHHHHhhC-
Confidence 356677888999998876 79999865 466899999999999998 7664 34443 22 1 155677888888
Q ss_pred CCcEEEE
Q psy9602 222 ATPLFYY 228 (239)
Q Consensus 222 dLPIiLY 228 (239)
++||+.-
T Consensus 236 ~iPIa~d 242 (382)
T 2gdq_A 236 SVPVAGG 242 (382)
T ss_dssp SSCEEEC
T ss_pred CCCEEec
Confidence 7998863
No 425
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=60.81 E-value=16 Score=34.06 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=41.5
Q ss_pred ceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 164 FTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 164 vpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
+.+.++++. ..+..+.++.+.++|+|++.+..-+. ......+.++.+.+.+|++||++
T Consensus 226 l~vga~ig~--~~~~~~~a~~l~~aGvd~v~i~~~~G----~~~~~~e~i~~i~~~~p~~pvi~ 283 (494)
T 1vrd_A 226 LLVGAAVGT--SPETMERVEKLVKAGVDVIVIDTAHG----HSRRVIETLEMIKADYPDLPVVA 283 (494)
T ss_dssp BCCEEEECS--STTHHHHHHHHHHTTCSEEEECCSCC----SSHHHHHHHHHHHHHCTTSCEEE
T ss_pred hccccccCc--CHhHHHHHHHHHHhCCCEEEEEecCC----chHHHHHHHHHHHHHCCCceEEe
Confidence 344445543 24567788899999999999864332 23567788888888887899986
No 426
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=60.71 E-value=22 Score=29.11 Aligned_cols=59 Identities=10% Similarity=0.140 Sum_probs=32.6
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVG 217 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Va 217 (239)
+.++.+.+.. ++||++ .|+-+.+++ ..+.++||+++.+..-.+..+ +..+..+-|.+..
T Consensus 154 ~~l~~~~~~~---~~pvia-~GGI~~~nv----~~~~~~Ga~gv~vgs~i~~~~-d~~~~~~~~~~~~ 212 (221)
T 1yad_A 154 SLLSDIKQRI---SIPVIA-IGGMTPDRL----RDVKQAGADGIAVMSGIFSSA-EPLEAARRYSRKL 212 (221)
T ss_dssp HHHHHHHHHC---CSCEEE-ESSCCGGGH----HHHHHTTCSEEEESHHHHTSS-SHHHHHHHHHHHH
T ss_pred HHHHHHHHhC---CCCEEE-ECCCCHHHH----HHHHHcCCCEEEEhHHhhCCC-CHHHHHHHHHHHH
Confidence 4455555543 478876 222233332 333447999999997655544 5344444444433
No 427
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=60.27 E-value=38 Score=29.79 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=57.2
Q ss_pred cCCCHHHHHH---------HHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHH
Q psy9602 141 VSMTTAERKL---------NLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVD 211 (239)
Q Consensus 141 ~sLT~eER~~---------li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~ 211 (239)
..+|.+||.+ |++.+.+. +-++|++.--.+.++++++++.... -++.+=+-.+.|+.. +.+.+++
T Consensus 2 ~~~~~~~r~~~~~~~~~~~l~~~m~~k----~~~LiVALD~~~~~~al~l~~~l~~-~v~~~KvG~~l~~~~-G~~~~v~ 75 (267)
T 3gdm_A 2 SKATYKERAATHPSPVAAKLFNIMHEK----QTNLCASLDVRTTKELLELVEALGP-KICLLKTHVDILTDF-SMEGTVK 75 (267)
T ss_dssp -CCCHHHHHHHCSCHHHHHHHHHHHHH----TCCEEEECCCSCHHHHHHHHHHHGG-GCSEEEECGGGCSSC-CTTTTHH
T ss_pred CcCCHHHHHhccCChHHHHHHHHHHhh----CCCEEEEeCcCCHHHHHHHHHHhCC-cCcEEEECHHHHHhc-CHHHHHH
Confidence 4678888855 34443331 4589999988899999999998865 467888888888776 6664677
Q ss_pred HHHHHHhhCCCCcEEE
Q psy9602 212 YLRDVGEAAPATPLFY 227 (239)
Q Consensus 212 yf~~VaeatpdLPIiL 227 (239)
.++++++.. +.+|++
T Consensus 76 ~L~~l~~~~-g~~Ifl 90 (267)
T 3gdm_A 76 PLKALSAKY-NFLLFE 90 (267)
T ss_dssp HHHHHHHHH-TCEEEE
T ss_pred HHHHHHhhc-CCeEEE
Confidence 777776554 677664
No 428
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=60.22 E-value=7.7 Score=31.67 Aligned_cols=77 Identities=4% Similarity=-0.116 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
.=..++++-+.+.+...+..+++.....+.....+..+...+.++|++++.++.. ++ ..++.+. .. ++|+
T Consensus 12 ~~~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~----~~----~~~~~~~-~~-~iPv 81 (276)
T 2h0a_A 12 EFYRRLVEGIEGVLLEQRYDLALFPILSLARLKRYLENTTLAYLTDGLILASYDL----TE----RFEEGRL-PT-ERPV 81 (276)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEECCCCSCCCCC---------CCCSEEEEESCCC----C----------CC-SC-SSCE
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecCCC----CH----HHHHHHh-hc-CCCE
Confidence 3344555555555544345666655545544455566666777899998886532 21 1233333 34 7899
Q ss_pred EEEeCCC
Q psy9602 226 FYYHIPM 232 (239)
Q Consensus 226 iLYN~P~ 232 (239)
+++|.+.
T Consensus 82 V~~~~~~ 88 (276)
T 2h0a_A 82 VLVDAQN 88 (276)
T ss_dssp EEESSCC
T ss_pred EEEeccC
Confidence 9988753
No 429
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=60.16 E-value=35 Score=31.32 Aligned_cols=73 Identities=7% Similarity=-0.010 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++-. ++-+.++++++++..++.|.+.+= -|. .+ . . ++.++.|.+.+ ++|
T Consensus 162 ~~d~e~v~avR~avG~-d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--eP~--~~-~--d-~~~~~~l~~~~-~iP 231 (405)
T 3rr1_A 162 DAAVARVAEIRSAFGN-TVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIE--EPV--LA-E--Q-AETYARLAAHT-HLP 231 (405)
T ss_dssp HHHHHHHHHHHHTTGG-GSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEE--CSS--CC-S--S-THHHHHHHTTC-SSC
T ss_pred HHHHHHHHHHHHHhCC-CceEEEECCCCCCHHHHHHHHHHHHhcCCCEEE--CCC--Cc-c--c-HHHHHHHHhcC-CCC
Confidence 4457788888888876 79999855 567899999999999999887664 332 12 1 1 35678888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.=
T Consensus 232 Ia~d 235 (405)
T 3rr1_A 232 IAAG 235 (405)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9863
No 430
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=60.13 E-value=70 Score=26.20 Aligned_cols=86 Identities=7% Similarity=0.072 Sum_probs=53.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCce---EEEe------cCCCC-------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCC
Q psy9602 142 SMTTAERKLNLEAWMTEAKTHGFT---VMVQ------IGGTC-------FQEVVELAKHAESLNVHAVLCLPELFFTPAS 205 (239)
Q Consensus 142 sLT~eER~~li~~vve~~~G~rvp---VIaG------Vg~~S-------t~eAIelar~A~~aGAdaVlV~PP~y~~~~s 205 (239)
.++.++..++.+.+.+. ++. +.+. .++.+ .+...+.++.|.++|+..+.+.|...... +
T Consensus 43 ~~~~~~~~~~~~~l~~~----gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~-~ 117 (287)
T 2x7v_A 43 LPSDEAATKFKREMKKH----GIDWENAFCHSGYLINLASPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSHLGT-G 117 (287)
T ss_dssp CCCHHHHHHHHHHHHHH----TCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEECTTS-C
T ss_pred CCCHHHHHHHHHHHHHc----CCCcceeEEecccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCC-C
Confidence 46667776666665554 233 3332 12211 33455678889999999998876544332 2
Q ss_pred H----HHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 206 V----EDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 206 ~----e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
. +.+.+.++.+++...++.+.+-|.|.
T Consensus 118 ~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~ 148 (287)
T 2x7v_A 118 EEEGIDRIVRGLNEVLNNTEGVVILLENVSQ 148 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHcccCCCEEEEeCCCC
Confidence 2 34667777787663378999988864
No 431
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=59.96 E-value=32 Score=30.58 Aligned_cols=75 Identities=13% Similarity=0.139 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHH-HHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVV-ELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAI-elar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
+.++=.++++.+.+.++. ++++.+-. ++-+.++++ ++++..++.|++.+ --|. .+ . =.+.++.|.+.+
T Consensus 167 ~~~~~~e~v~avr~a~g~-~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~i--EqP~--~~-~---d~~~~~~l~~~~- 236 (369)
T 2p8b_A 167 NVKEDVKRIEAVRERVGN-DIAIRVDVNQGWKNSANTLTALRSLGHLNIDWI--EQPV--IA-D---DIDAMAHIRSKT- 236 (369)
T ss_dssp CHHHHHHHHHHHHHHHCT-TSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCE--ECCB--CT-T---CHHHHHHHHHTC-
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEE--ECCC--Cc-c---cHHHHHHHHHhC-
Confidence 467777889999998876 79998865 456789999 99999999998854 3443 22 1 255677888888
Q ss_pred CCcEEEE
Q psy9602 222 ATPLFYY 228 (239)
Q Consensus 222 dLPIiLY 228 (239)
++||+.-
T Consensus 237 ~iPI~~d 243 (369)
T 2p8b_A 237 DLPLMID 243 (369)
T ss_dssp CSCEEES
T ss_pred CCCEEeC
Confidence 7999863
No 432
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=59.82 E-value=28 Score=30.70 Aligned_cols=61 Identities=13% Similarity=-0.042 Sum_probs=41.4
Q ss_pred CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 127 PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 127 gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
|+.|++..+ .++.++..+.++.+.+.. +.|+.+++...+. +..+.++.+.+.|+|+|.+..
T Consensus 36 G~lG~i~~~------~~~~~~~~~~i~~i~~~~---~~p~gvnl~~~~~-~~~~~~~~a~~~g~d~V~~~~ 96 (332)
T 2z6i_A 36 GGLGIIGGG------NAPKEVVKANIDKIKSLT---DKPFGVNIMLLSP-FVEDIVDLVIEEGVKVVTTGA 96 (332)
T ss_dssp TSBEEEECT------TCCHHHHHHHHHHHHHHC---CSCEEEEECTTST-THHHHHHHHHHTTCSEEEECS
T ss_pred CCcEEeCCC------CCCHHHHHHHHHHHHHhc---CCCEEEEecCCCC-CHHHHHHHHHHCCCCEEEECC
Confidence 555665443 368888888888887765 3488888765222 234566777889999999864
No 433
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=59.82 E-value=85 Score=27.34 Aligned_cols=86 Identities=14% Similarity=0.142 Sum_probs=50.8
Q ss_pred EEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC-----CC----HHHHHHHHHHHHhCCCCE--EEECCCCC
Q psy9602 132 MVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG-----TC----FQEVVELAKHAESLNVHA--VLCLPELF 200 (239)
Q Consensus 132 vV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~-----~S----t~eAIelar~A~~aGAda--VlV~PP~y 200 (239)
++|-.+|+ .+...+++..+.+. ++|||+-... .+ .+...++.+.|.++|..- +++=|-..
T Consensus 103 iINdvs~~-----~d~~~~~~~~~a~~----~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~g 173 (271)
T 2yci_X 103 MINSTSAD-----QWKMDIFFPMAKKY----EAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLIL 173 (271)
T ss_dssp EEEEECSC-----HHHHHHHHHHHHHH----TCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCC
T ss_pred EEEECCCC-----ccccHHHHHHHHHc----CCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCC
Confidence 45555554 23234566666554 4677775432 23 445556777788888874 77766554
Q ss_pred C-CCCCH---HHHHHHHHHHHhhC-CCCcEEE
Q psy9602 201 F-TPASV---EDLVDYLRDVGEAA-PATPLFY 227 (239)
Q Consensus 201 ~-~~~s~---e~iv~yf~~Vaeat-pdLPIiL 227 (239)
+ .. +. -++++.++.+.+.. |+.|+++
T Consensus 174 figk-~~~~~~~~l~~l~~~~~~~~p~~p~l~ 204 (271)
T 2yci_X 174 PVNV-AQEHAVEVLETIRQIKLMANPAPRTVL 204 (271)
T ss_dssp CTTT-STHHHHHHHHHHHHHTTSSSSCCEEEE
T ss_pred cccc-CHHHHHHHHHHHHHHHHhCCCCCCEEE
Confidence 4 33 44 36677777776554 4577765
No 434
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=59.57 E-value=39 Score=27.73 Aligned_cols=76 Identities=11% Similarity=0.007 Sum_probs=51.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEE-ec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhh
Q psy9602 142 SMTTAERKLNLEAWMTEAKTHGFTVMV-QI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 142 sLT~eER~~li~~vve~~~G~rvpVIa-GV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaea 219 (239)
.++.++..++.+.+.+. ++.+.+ +. ...+.+...+.++.|.++|+..+.+.|. .+.++.+..+++.
T Consensus 57 ~~~~~~~~~~~~~l~~~----gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~--------~~~l~~l~~~a~~ 124 (257)
T 3lmz_A 57 NSTDEQIRAFHDKCAAH----KVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPN--------YELLPYVDKKVKE 124 (257)
T ss_dssp TCCHHHHHHHHHHHHHT----TCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEEC--------GGGHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHc----CCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCC--------HHHHHHHHHHHHH
Confidence 45677766666655543 344443 22 2257888888999999999999998643 1234455666667
Q ss_pred CCCCcEEEEeC
Q psy9602 220 APATPLFYYHI 230 (239)
Q Consensus 220 tpdLPIiLYN~ 230 (239)
. ++.+.+.|.
T Consensus 125 ~-gv~l~lEn~ 134 (257)
T 3lmz_A 125 Y-DFHYAIHLH 134 (257)
T ss_dssp H-TCEEEEECC
T ss_pred c-CCEEEEecC
Confidence 7 899999998
No 435
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=59.56 E-value=35 Score=30.91 Aligned_cols=71 Identities=15% Similarity=0.127 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEe-----------cCCCCHHHHHHHHHHHHhCCCC----EEEECCCCCCCCCCHHH
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQ-----------IGGTCFQEVVELAKHAESLNVH----AVLCLPELFFTPASVED 208 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaG-----------Vg~~St~eAIelar~A~~aGAd----aVlV~PP~y~~~~s~e~ 208 (239)
...+-.+-+..+++++...++|+++= ....+.+-...-++.|.++||| .+=+..|
T Consensus 157 ~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~y~---------- 226 (307)
T 3fok_A 157 GTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLPVV---------- 226 (307)
T ss_dssp THHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEECC----------
T ss_pred hHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeCCc----------
Q ss_pred HHHHHHHHHhhCCCCcEEE
Q psy9602 209 LVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 209 iv~yf~~VaeatpdLPIiL 227 (239)
+=|+.|.+++ .+|+++
T Consensus 227 --e~f~~Vv~a~-~vPVVi 242 (307)
T 3fok_A 227 --EEMERVMEST-TMPTLL 242 (307)
T ss_dssp --TTHHHHGGGC-SSCEEE
T ss_pred --HHHHHHHHhC-CCCEEE
No 436
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=59.56 E-value=17 Score=32.21 Aligned_cols=43 Identities=26% Similarity=0.189 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhcCCCceEEEe-cCCCCHHHHHHHHHHHHhCCCCEEEECC
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQ-IGGTCFQEVVELAKHAESLNVHAVLCLP 197 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaG-Vg~~St~eAIelar~A~~aGAdaVlV~P 197 (239)
..++++.+.+ + ++||++- ++... ..+.++.++++|+|++.|..
T Consensus 170 ~~~~i~~vr~-~---~~Pv~vK~v~~g~---~~e~a~~~~~~G~d~I~vs~ 213 (332)
T 1vcf_A 170 LVERLAELLP-L---PFPVMVKEVGHGL---SREAALALRDLPLAAVDVAG 213 (332)
T ss_dssp HHHHHHHHCS-C---SSCEEEECSSSCC---CHHHHHHHTTSCCSEEECCC
T ss_pred HHHHHHHHHc-C---CCCEEEEecCCCC---CHHHHHHHHHcCCCEEEeCC
Confidence 3455666665 4 5799995 64322 23457889999999999953
No 437
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=59.20 E-value=52 Score=30.77 Aligned_cols=69 Identities=13% Similarity=0.038 Sum_probs=52.0
Q ss_pred eEEEecCCC--------CH-HHHHHHHHHHHhCCCCEEEECCCC----------C---------CC----C-C-CHHHHH
Q psy9602 165 TVMVQIGGT--------CF-QEVVELAKHAESLNVHAVLCLPEL----------F---------FT----P-A-SVEDLV 210 (239)
Q Consensus 165 pVIaGVg~~--------St-~eAIelar~A~~aGAdaVlV~PP~----------y---------~~----~-~-s~e~iv 210 (239)
.||+.+-.- +. +..++.+.+.+++|+++|.|+|++ - +. + + +.+++.
T Consensus 17 ~vi~q~F~w~~~~~~gGd~~~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk 96 (527)
T 1gcy_A 17 EIILQGFHWNVVREAPNDWYNILRQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLR 96 (527)
T ss_dssp CCEEECCCTTHHHHSTTTHHHHHHHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHH
T ss_pred cEEEEEEEcCCCcccCCcHHHHHHHHHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHH
Confidence 466666533 35 888889999999999999999987 1 11 2 2 688999
Q ss_pred HHHHHHHhhCCCCcEEEEeCCCCcc
Q psy9602 211 DYLRDVGEAAPATPLFYYHIPMFTR 235 (239)
Q Consensus 211 ~yf~~VaeatpdLPIiLYN~P~~TG 235 (239)
+..+++.++ ++-||+-=.|-.++
T Consensus 97 ~Lv~~aH~~--GI~VilD~V~NHt~ 119 (527)
T 1gcy_A 97 QAASALGGA--GVKVLYDVVPNHMN 119 (527)
T ss_dssp HHHHHHHHT--TCEEEEEECCSBCC
T ss_pred HHHHHHHHC--CCEEEEEEeecCcC
Confidence 999998886 79999865555443
No 438
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=59.09 E-value=29 Score=30.92 Aligned_cols=63 Identities=21% Similarity=0.184 Sum_probs=44.3
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC-----CCC---CCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL-----FFT---PASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~-----y~~---~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
+.-++.++.... .|+.++++|+|++++.... .+. +.+-++++.|.+.|++++ +.+.++=|.|.
T Consensus 29 ~~i~m~tayDa~------sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~-~~~~vvaD~pf 99 (275)
T 3vav_A 29 EKIAMLTCYDAS------FAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQ-PRALIVADLPF 99 (275)
T ss_dssp CCEEEEECCSHH------HHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTC-CSSEEEEECCT
T ss_pred CcEEEEeCcCHH------HHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcC-CCCCEEEecCC
Confidence 444555666533 4677889999999887433 111 128999999999999998 55556678884
No 439
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=58.89 E-value=26 Score=31.51 Aligned_cols=73 Identities=12% Similarity=0.129 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q psy9602 145 TAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPAT 223 (239)
Q Consensus 145 ~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdL 223 (239)
.++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ ++ .+.++.|.+.+ ++
T Consensus 167 ~~~d~~~v~avR~~~g~-~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iE--qP~--~~---~~-~~~~~~l~~~~-~i 236 (368)
T 3q45_A 167 KELDVERIRMIREAAGD-SITLRIDANQGWSVETAIETLTLLEPYNIQHCE--EPV--SR---NL-YTALPKIRQAC-RI 236 (368)
T ss_dssp HHHHHHHHHHHHHHHCS-SSEEEEECTTCBCHHHHHHHHHHHGGGCCSCEE--CCB--CG---GG-GGGHHHHHHTC-SS
T ss_pred HHHHHHHHHHHHHHhCC-CCeEEEECCCCCChHHHHHHHHHHhhcCCCEEE--CCC--Ch---hH-HHHHHHHHhhC-CC
Confidence 57778889999999977 89999955 577899999999999999877654 232 11 21 35567788888 79
Q ss_pred cEEE
Q psy9602 224 PLFY 227 (239)
Q Consensus 224 PIiL 227 (239)
||+.
T Consensus 237 PIa~ 240 (368)
T 3q45_A 237 PIMA 240 (368)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9886
No 440
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=58.76 E-value=23 Score=31.56 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.++++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+ --|.. + . + ++.++.|.+.+ ++|
T Consensus 167 ~~d~~~v~avR~a~g~-~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~i--EqP~~--~-~--d-~~~~~~l~~~~-~iP 236 (354)
T 3jva_A 167 EADIARVKAIREAVGF-DIKLRLDANQAWTPKDAVKAIQALADYQIELV--EQPVK--R-R--D-LEGLKYVTSQV-NTT 236 (354)
T ss_dssp HHHHHHHHHHHHHHCT-TSEEEEECTTCSCHHHHHHHHHHTTTSCEEEE--ECCSC--T-T--C-HHHHHHHHHHC-SSE
T ss_pred HHHHHHHHHHHHHcCC-CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECCCC--h-h--h-HHHHHHHHHhC-CCC
Confidence 6667888999999877 89999955 56789999999999998775544 34432 2 1 1 45677888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 237 Ia~d 240 (354)
T 3jva_A 237 IMAD 240 (354)
T ss_dssp EEES
T ss_pred EEEc
Confidence 9873
No 441
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=58.75 E-value=8.2 Score=33.87 Aligned_cols=74 Identities=12% Similarity=0.117 Sum_probs=49.1
Q ss_pred eccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCC---CCCCCHHHHH
Q psy9602 134 NGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELF---FTPASVEDLV 210 (239)
Q Consensus 134 ~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y---~~~~s~e~iv 210 (239)
.|+||.-..+ .++-.++++.+.+.. ++||++|.|=.+.+++-+. .+ +||+++|-.-.+ -.. +.+++.
T Consensus 174 ~GvTG~~~~~-~~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~a~~~----~~-~ADGVIVGSAiVk~i~~~-~~~~~~ 243 (252)
T 3tha_A 174 IGITGTKSVE-EAILQDKVKEIRSFT---NLPIFVGFGIQNNQDVKRM----RK-VADGVIVGTSIVKCFKQG-NLDIIM 243 (252)
T ss_dssp SCSSSCSHHH-HHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHH----TT-TSSEEEECHHHHHHTTSS-CHHHHH
T ss_pred CCCCCcccCC-CHHHHHHHHHHHHhc---CCcEEEEcCcCCHHHHHHH----Hh-cCCEEEECHHHHHHHHhc-CHHHHH
Confidence 4889987544 334566777776653 5899999998777666433 33 699999975432 122 567777
Q ss_pred HHHHHHH
Q psy9602 211 DYLRDVG 217 (239)
Q Consensus 211 ~yf~~Va 217 (239)
++.+++.
T Consensus 244 ~~~~~~~ 250 (252)
T 3tha_A 244 KDIEEIF 250 (252)
T ss_dssp HHHHHHC
T ss_pred HHHHHHh
Confidence 7766654
No 442
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=58.72 E-value=27 Score=30.04 Aligned_cols=73 Identities=10% Similarity=-0.002 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCC-CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGG-TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~-~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
..++++-+.+.+.| .-+++-... ...+.-.++.+...+.++|++++.|+.. ++ .+++.+.+. ++|++
T Consensus 88 ~~~~~~gi~~~a~g--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~----~~----~~~~~l~~~--~iPvV 155 (366)
T 3h5t_A 88 SVDFLAGVAQAAGD--TQLTLIPASPASSVDHVSAQQLVNNAAVDGVVIYSVAK----GD----PHIDAIRAR--GLPAV 155 (366)
T ss_dssp HHHHHHHHHHHSSS--CEEEEEECCCCTTCCHHHHHHHHHTCCCSCEEEESCCT----TC----HHHHHHHHH--TCCEE
T ss_pred HHHHHHHHHHHHhh--CCEEEEEcCCCccHHHHHHHHHHHhCCCCEEEEecCCC----Ch----HHHHHHHHC--CCCEE
Confidence 44566666665555 233332222 2212344566667777888888876421 11 233444443 68888
Q ss_pred EEeCCC
Q psy9602 227 YYHIPM 232 (239)
Q Consensus 227 LYN~P~ 232 (239)
+.|.+.
T Consensus 156 ~i~~~~ 161 (366)
T 3h5t_A 156 IADQPA 161 (366)
T ss_dssp EESSCC
T ss_pred EECCcc
Confidence 887753
No 443
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=58.65 E-value=32 Score=31.75 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=52.8
Q ss_pred HHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.++++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ .+ .+.++.|.+.+ ++||+.
T Consensus 215 ~e~v~avR~a~G~-d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--eP~--~~-~d---~~~~~~l~~~~-~iPIa~ 284 (426)
T 4e4f_A 215 PKLFEAVRDKFGF-NEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME--DPT--PA-EN---QACFRLIRQHT-VTPIAV 284 (426)
T ss_dssp HHHHHHHHHHHTT-SSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE--CCS--CC-SS---GGGGHHHHTTC-CSCEEE
T ss_pred HHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE--CCC--Ch-HH---HHHHHHHHhcC-CCCEEe
Confidence 3678888888877 89999955 577899999999999999987664 332 11 11 34567888888 799986
Q ss_pred E
Q psy9602 228 Y 228 (239)
Q Consensus 228 Y 228 (239)
-
T Consensus 285 d 285 (426)
T 4e4f_A 285 G 285 (426)
T ss_dssp C
T ss_pred C
Confidence 3
No 444
>2q22_A Uncharacterized protein; YP_323524.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PG4; 2.11A {Anabaena variabilis atcc 29413} SCOP: d.365.1.1
Probab=58.65 E-value=21 Score=28.86 Aligned_cols=56 Identities=14% Similarity=0.033 Sum_probs=45.0
Q ss_pred CcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHh-CCCCEEEEC
Q psy9602 140 GVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAES-LNVHAVLCL 196 (239)
Q Consensus 140 ~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~-aGAdaVlV~ 196 (239)
.+.|+.+||..|-+.....+.. ---+++||.+.|.++++.-.|...+ +|-...++.
T Consensus 28 ap~ls~~~r~~Lr~aL~~~~~~-sd~~~lGIcA~s~~~a~~ALr~~~~alg~~~~~~~ 84 (139)
T 2q22_A 28 APILKPSEKESVRRALILITKL-SDYQILGICADTADEGLLAMKTYSHALGYEVPIDL 84 (139)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHT-SSEEEEEEEESSHHHHHHHHHHHHHHTTCCCC-CC
T ss_pred ccCCCHHHHHHHHHHHHHHHhh-CCcEEEEeecCCHHHHHHHHHHHHHHhCCCccccC
Confidence 3789999999999999888776 5789999999999999998887665 576554443
No 445
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=58.60 E-value=32 Score=31.49 Aligned_cols=74 Identities=7% Similarity=0.018 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+=- |. ..+ . . +..++.|.+.+ ++|
T Consensus 197 ~~d~e~v~avR~a~g~-d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEq--P~-~~~-~--~-~~~~~~l~~~~-~iP 267 (410)
T 3dip_A 197 KDGLEPFRKIRAAVGQ-RIEIMCELHSLWGTHAAARICNALADYGVLWVED--PI-AKM-D--N-IPAVADLRRQT-RAP 267 (410)
T ss_dssp HHHHHHHHHHHHHHTT-SSEEEEECTTCBCHHHHHHHHHHGGGGTCSEEEC--CB-SCT-T--C-HHHHHHHHHHH-CCC
T ss_pred HHHHHHHHHHHHHcCC-CceEEEECCCCCCHHHHHHHHHHHHhcCCCEEEC--CC-CCc-c--c-HHHHHHHHhhC-CCC
Confidence 3456788888998877 79999955 5788999999999999998876652 31 112 1 1 45668888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 268 Ia~d 271 (410)
T 3dip_A 268 ICGG 271 (410)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9863
No 446
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=58.55 E-value=31 Score=31.28 Aligned_cols=76 Identities=18% Similarity=0.215 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 143 MTTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 143 LT~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
.+.++=.+.++.+.+.++. ++.+++=. ++-+.++|+++++..++.+... +--|. ...+-.+.++.|.+.+
T Consensus 190 ~~~~~d~~~v~avR~~~G~-~~~l~vDaN~~~~~~~A~~~~~~l~~~~~~~--iEeP~-----~~~~d~~~~~~l~~~~- 260 (388)
T 4h83_A 190 LSAAEDAARITAAREAAGD-DFIICIDANQGYKPAVAVDLSRRIADLNIRW--FEEPV-----EWHNDKRSMRDVRYQG- 260 (388)
T ss_dssp SCHHHHHHHHHHHHHHHCS-SSEEEEECTTCBCHHHHHHHHHHTTTSCCCC--EESCB-----CSTTHHHHHHHHHHHS-
T ss_pred CCHHHHHHHHHHHHHhcCC-CeEEEEecCcCCCHHHHHHHHHHhhhcCcce--eecCc-----ccccchHHHHHHHhhc-
Confidence 3567777888999999977 89999955 5679999999999999887542 22232 1223456788888888
Q ss_pred CCcEEE
Q psy9602 222 ATPLFY 227 (239)
Q Consensus 222 dLPIiL 227 (239)
++||..
T Consensus 261 ~ipIa~ 266 (388)
T 4h83_A 261 SVPVCA 266 (388)
T ss_dssp SSCEEE
T ss_pred CCCccC
Confidence 799986
No 447
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=58.22 E-value=30 Score=31.08 Aligned_cols=74 Identities=9% Similarity=0.061 Sum_probs=54.8
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
..++=.++++.+.+.++ ++++.+-. ++.+.++++++++..++.|++.+= .|+ .+ .-.+.++.|.+.+ +
T Consensus 173 ~~~~~~e~v~avr~a~g--d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE--qP~--~~----~~~~~~~~l~~~~-~ 241 (384)
T 2pgw_A 173 GEKLDLEITAAVRGEIG--DARLRLDANEGWSVHDAINMCRKLEKYDIEFIE--QPT--VS----WSIPAMAHVREKV-G 241 (384)
T ss_dssp CHHHHHHHHHHHHTTST--TCEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE--CCS--CT----TCHHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHcC--CcEEEEecCCCCCHHHHHHHHHHHHhcCCCEEe--CCC--Ch----hhHHHHHHHHhhC-C
Confidence 56666788888888764 58888855 466889999999999999998653 443 22 1255677888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 242 iPI~~d 247 (384)
T 2pgw_A 242 IPIVAD 247 (384)
T ss_dssp SCEEES
T ss_pred CCEEEe
Confidence 999863
No 448
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=58.15 E-value=37 Score=27.26 Aligned_cols=71 Identities=13% Similarity=0.041 Sum_probs=41.8
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.++++-+.+.+...+..+++.....+.+...+..+...+.++|++++.++.. . +.+ .+. .. ++|++++
T Consensus 18 ~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~--~-~~~-------~l~-~~-~~pvV~~ 85 (255)
T 1byk_A 18 NLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTG--I-TEE-------MLA-HW-QSSLVLL 85 (255)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHTTTCCEEEEECCTT--C-CTT-------TSG-GG-SSSEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEecCcc--c-cHH-------HHH-hc-CCCEEEE
Confidence 3444444333322135566655566777777778888888999999887432 1 111 122 33 6899988
Q ss_pred eCC
Q psy9602 229 HIP 231 (239)
Q Consensus 229 N~P 231 (239)
|.+
T Consensus 86 ~~~ 88 (255)
T 1byk_A 86 ARD 88 (255)
T ss_dssp SSC
T ss_pred ccc
Confidence 875
No 449
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=57.74 E-value=32 Score=31.98 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 179 VELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 179 Ielar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
.+.++.+.++|+|.+.+-..+. .++.+.+..+.+.+.. ++||+.=|.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G----~~~~~~e~I~~ik~~~-~i~Vi~g~V 192 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG----HSLNIIRTLKEIKSKM-NIDVIVGNV 192 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC----SBHHHHHHHHHHHTTC-CCEEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCCCC----CcccHHHHHHHHHhcC-CCeEEEeec
Confidence 6889999999999998853332 2366778888888888 799987544
No 450
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=57.51 E-value=40 Score=30.72 Aligned_cols=72 Identities=10% Similarity=0.037 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+=- |. .+ . =++.++.|.+.+ ++|
T Consensus 194 ~~d~~~v~avR~a~g~-~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEe--P~--~~-~---~~~~~~~l~~~~-~iP 263 (400)
T 4dxk_A 194 KSALEPFEKIRKAVGD-KMDIMVEFHSMWQLLPAMQIAKALTPYQTFWHED--PI--KM-D---SLSSLTRYAAVS-PAP 263 (400)
T ss_dssp HHHHHHHHHHHHHHGG-GSEEEEECTTCBCHHHHHHHHHHTGGGCCSEEEC--CB--CT-T---SGGGHHHHHHHC-SSC
T ss_pred HHHHHHHHHHHHHcCC-CceEEEECCCCCCHHHHHHHHHHHhhcCCCEEEc--CC--Cc-c---cHHHHHHHHHhC-CCC
Confidence 3446788888888877 79999955 5778999999999999999876653 32 11 1 134577888888 799
Q ss_pred EEE
Q psy9602 225 LFY 227 (239)
Q Consensus 225 IiL 227 (239)
|+.
T Consensus 264 Ia~ 266 (400)
T 4dxk_A 264 ISA 266 (400)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
No 451
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=57.22 E-value=48 Score=29.94 Aligned_cols=73 Identities=8% Similarity=-0.043 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhh-----
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEA----- 219 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaea----- 219 (239)
++=.++++.+.+.++. ++++++-+ ++.+.++++++++..++.|.+. +--|.. . + ++.++.|.+.
T Consensus 185 ~~~~e~v~avR~~~g~-d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~--iE~P~~--~-d----~~~~~~l~~~l~~~g 254 (392)
T 3p3b_A 185 KRDIAIVRGISEVAGP-AGKIMIDANNAYNLNLTKEVLAALSDVNLYW--LEEAFH--E-D----EALYEDLKEWLGQRG 254 (392)
T ss_dssp HHHHHHHHHHHHHHCT-TCCEEEECTTCCCHHHHHHHHHHTTTSCEEE--EECSSS--C-C----HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCC-CCeEEEECCCCCCHHHHHHHHHHHHhcCCCE--EecCCc--c-c----HHHHHHHHHhhccCC
Confidence 4446778888888876 79999865 4668999999999999887654 444442 2 2 4456667776
Q ss_pred CCCCcEEEEe
Q psy9602 220 APATPLFYYH 229 (239)
Q Consensus 220 tpdLPIiLYN 229 (239)
+ ++||+.-.
T Consensus 255 ~-~iPIa~dE 263 (392)
T 3p3b_A 255 Q-NVLIADGE 263 (392)
T ss_dssp C-CCEEEECC
T ss_pred C-CccEEecC
Confidence 7 79998754
No 452
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=57.15 E-value=20 Score=31.17 Aligned_cols=42 Identities=7% Similarity=0.046 Sum_probs=33.9
Q ss_pred HHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 184 HAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 184 ~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
.+.+.|+|+++|---. .- +.+.+.+..+.|.+ + ++||+|+-+
T Consensus 31 ~~~~~GtDaI~vGgs~--gv-t~~~~~~~v~~ik~-~-~~Piil~p~ 72 (235)
T 3w01_A 31 AICMSQTDAIMIGGTD--DV-TEDNVIHLMSKIRR-Y-PLPLVLEIS 72 (235)
T ss_dssp HHHTSSCSEEEECCSS--CC-CHHHHHHHHHHHTT-S-CSCEEEECC
T ss_pred HHHHcCCCEEEECCcC--Cc-CHHHHHHHHHHhcC-c-CCCEEEecC
Confidence 3578999999998522 22 78999999999998 7 899999654
No 453
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=57.12 E-value=29 Score=32.26 Aligned_cols=73 Identities=11% Similarity=0.161 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCc
Q psy9602 146 AERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATP 224 (239)
Q Consensus 146 eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLP 224 (239)
++=.+.++.+.+.++. ++++++=+ ++-+.++++++++..++.|.+.+= -|. .+ +. ++.++.|.+.+ ++|
T Consensus 224 ~~d~~~v~avR~a~G~-d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE--eP~--~~---~d-~~~~~~l~~~~-~iP 293 (440)
T 3t6c_A 224 KSIPRLFDHLRNKLGF-SVELLHDAHERITPINAIHMAKALEPYQLFFLE--DPV--AP---EN-TEWLKMLRQQS-STP 293 (440)
T ss_dssp HHHHHHHHHHHHHHCS-SSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE--CSS--CG---GG-GGGHHHHHHHC-CSC
T ss_pred HHHHHHHHHHHHhcCC-CCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE--CCC--Ch---hh-HHHHHHHHhhc-CCC
Confidence 4446778889999877 89999955 577899999999999999877664 332 11 22 34578888888 799
Q ss_pred EEEE
Q psy9602 225 LFYY 228 (239)
Q Consensus 225 IiLY 228 (239)
|+.-
T Consensus 294 Ia~d 297 (440)
T 3t6c_A 294 IAMG 297 (440)
T ss_dssp EEEC
T ss_pred EEeC
Confidence 9863
No 454
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=57.08 E-value=18 Score=33.54 Aligned_cols=90 Identities=14% Similarity=0.211 Sum_probs=62.4
Q ss_pred hcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEe---------------cCC---------------C
Q psy9602 125 MAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQ---------------IGG---------------T 173 (239)
Q Consensus 125 ~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaG---------------Vg~---------------~ 173 (239)
-+.|++++ ..++. +=|...|+...+..+-.+++||+= +++ .
T Consensus 173 A~AGADiVAPSdMM--------DGrV~aIR~aLd~~G~~~v~IMsYsaKyASafYGPFRdAa~Sa~p~~GDRktYQmdpa 244 (356)
T 3obk_A 173 ARAGADMVCPSDMM--------DGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPS 244 (356)
T ss_dssp HHHTCSEEEECSCC--------TTHHHHHHHHHHHTTCTTSEEEEEEEEBCCSTTHHHHHHHTCCCSTTCCSTTTSBCTT
T ss_pred HHcCCCeEeccccc--------cCHHHHHHHHHHHCCCCCcceehhHHHHhhhccchhhHHhcCCCCCCCCccccCCCCC
Confidence 34566655 43332 567788888888754336888852 111 2
Q ss_pred CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 174 CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 174 St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+.++|+..+..=.+-|||-|||=|-..| ++-.+.+.+.+ ++|+..||..
T Consensus 245 N~~EAlrE~~lDi~EGAD~vMVKPal~Y--------LDIi~~vk~~~-~~PvaaYqVS 293 (356)
T 3obk_A 245 NSREAEREAEADASEGADMLMVKPGLPY--------LDVLAKIREKS-KLPMVAYHVS 293 (356)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEESSGGG--------HHHHHHHHHHC-SSCEEEEECH
T ss_pred CHHHHHHHHHhhHhcCCCEEEecCCCcH--------HHHHHHHHhcC-CCCEEEEEcc
Confidence 4688999888888889999999985433 34456666778 8999999964
No 455
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=57.04 E-value=56 Score=28.69 Aligned_cols=86 Identities=12% Similarity=0.002 Sum_probs=54.8
Q ss_pred hhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Q psy9602 124 RMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTP 203 (239)
Q Consensus 124 ~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~ 203 (239)
....|.+.++++.+ .|+.++-.++++.+.+. .+-+++-+. + .+.++.|.++|++.+-+.+-.+-..
T Consensus 138 a~~~GAD~VlLi~a----~L~~~~l~~l~~~a~~l----Gl~~lvevh--~----~eEl~~A~~~ga~iIGinnr~l~t~ 203 (272)
T 3tsm_A 138 ARSWGADCILIIMA----SVDDDLAKELEDTAFAL----GMDALIEVH--D----EAEMERALKLSSRLLGVNNRNLRSF 203 (272)
T ss_dssp HHHTTCSEEEEETT----TSCHHHHHHHHHHHHHT----TCEEEEEEC--S----HHHHHHHTTSCCSEEEEECBCTTTC
T ss_pred HHHcCCCEEEEccc----ccCHHHHHHHHHHHHHc----CCeEEEEeC--C----HHHHHHHHhcCCCEEEECCCCCccC
Confidence 34566666666655 57888888888887763 467777774 2 3456778899999998886443222
Q ss_pred CCHHHHHHHHHHHHhhCC-CCcEE
Q psy9602 204 ASVEDLVDYLRDVGEAAP-ATPLF 226 (239)
Q Consensus 204 ~s~e~iv~yf~~Vaeatp-dLPIi 226 (239)
..+ ++....+++..| +.|+|
T Consensus 204 -~~d--l~~~~~L~~~ip~~~~vI 224 (272)
T 3tsm_A 204 -EVN--LAVSERLAKMAPSDRLLV 224 (272)
T ss_dssp -CBC--THHHHHHHHHSCTTSEEE
T ss_pred -CCC--hHHHHHHHHhCCCCCcEE
Confidence 111 445556666665 35544
No 456
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=56.82 E-value=28 Score=31.23 Aligned_cols=72 Identities=13% Similarity=0.029 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcE
Q psy9602 147 ERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 147 ER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPI 225 (239)
+=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ +. ++.+..|.+.+ ++||
T Consensus 170 ~d~~~v~avR~a~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE--qP~--~~---~d-~~~~~~l~~~~-~iPI 239 (367)
T 3dg3_A 170 LDTAVVRALRERFGD-AIELYVDGNRGWSAAESLRAMREMADLDLLFAE--ELC--PA---DD-VLSRRRLVGQL-DMPF 239 (367)
T ss_dssp HHHHHHHHHHHHHGG-GSEEEEECTTCSCHHHHHHHHHHTTTSCCSCEE--SCS--CT---TS-HHHHHHHHHHC-SSCE
T ss_pred hHHHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHHHHHHHhCCCEEE--CCC--Cc---cc-HHHHHHHHHhC-CCCE
Confidence 446678888888876 78999855 567899999999999999877643 332 12 11 45667888888 7999
Q ss_pred EEE
Q psy9602 226 FYY 228 (239)
Q Consensus 226 iLY 228 (239)
+.-
T Consensus 240 a~d 242 (367)
T 3dg3_A 240 IAD 242 (367)
T ss_dssp EEC
T ss_pred Eec
Confidence 864
No 457
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=56.58 E-value=73 Score=28.94 Aligned_cols=70 Identities=6% Similarity=-0.050 Sum_probs=52.1
Q ss_pred HHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
.+.++.+.+.++. ++++++=. ++-+.++|+++++..++.|...+ --|.. + +. .+.++.|.+.+ ++||+.
T Consensus 186 ~~~v~avReavG~-d~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i--EeP~~--~---~d-~~~~~~l~~~~-~iPIa~ 255 (388)
T 3tcs_A 186 EEIIPTMRRELGD-DVDLLIDANSCYTPDRAIEVGHMLQDHGFCHF--EEPCP--Y---WE-LAQTKQVTDAL-DIDVTG 255 (388)
T ss_dssp HHHHHHHHHHHCS-SSEEEEECTTCCCHHHHHHHHHHHHHTTCCEE--ECCSC--T---TC-HHHHHHHHHHC-SSCEEE
T ss_pred HHHHHHHHHHhCC-CCeEEEeCCCCcCHHHHHHHHHHHhhcCCeEE--ECCCC--c---cC-HHHHHHHHHhc-CCCEEc
Confidence 4678888888877 89999955 57789999999999999987644 33431 2 11 34567888888 799876
Q ss_pred E
Q psy9602 228 Y 228 (239)
Q Consensus 228 Y 228 (239)
-
T Consensus 256 d 256 (388)
T 3tcs_A 256 G 256 (388)
T ss_dssp C
T ss_pred C
Confidence 3
No 458
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=56.57 E-value=35 Score=29.33 Aligned_cols=89 Identities=19% Similarity=0.162 Sum_probs=40.4
Q ss_pred hhhcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEE-ecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCC
Q psy9602 123 LRMAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMV-QIGGTCFQEVVELAKHAESLNVHAVLCLPELFF 201 (239)
Q Consensus 123 ~~~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIa-GVg~~St~eAIelar~A~~aGAdaVlV~PP~y~ 201 (239)
..++.+..+ |.|+|| |+.++.. .++.+++..+ ++|++. .-.+....-..++++.|.+.=-|.=++-.-|-.
T Consensus 64 ~a~~~g~~~-VigTTG----~~~e~~~-~l~~aa~~~~--~~~vv~a~N~siGv~ll~~l~~~aa~~~~dieIiE~HH~~ 135 (245)
T 1p9l_A 64 FLIDNGIHA-VVGTTG----FTAERFQ-QVESWLVAKP--NTSVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELHHPH 135 (245)
T ss_dssp HHHHTTCEE-EECCCC----CCHHHHH-HHHHHHHTST--TCEEEECSCCCHHHHHHHHHHHHHGGGCSEEEEEEEECTT
T ss_pred HHHHcCCCE-EEcCCC----CCHHHHH-HHHHHHHhCC--CCCEEEECCccHHHHHHHHHHHHHHhhcCCEEEEECcccC
Confidence 334444443 555776 5655443 3333333222 356544 223444555666677666653233333322222
Q ss_pred CC-CCHHHHHHHHHHHHhh
Q psy9602 202 TP-ASVEDLVDYLRDVGEA 219 (239)
Q Consensus 202 ~~-~s~e~iv~yf~~Vaea 219 (239)
+. ...-..+.--+.|++.
T Consensus 136 K~DaPSGTA~~lae~i~~~ 154 (245)
T 1p9l_A 136 KADAPSGTAARTAKLIAEA 154 (245)
T ss_dssp CCSSSCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHh
Confidence 32 0223444455555554
No 459
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=56.48 E-value=27 Score=30.82 Aligned_cols=74 Identities=14% Similarity=0.058 Sum_probs=0.0
Q ss_pred HHHHHHHhcCCCceEEE--ec--CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCC-CHHHHHHHHHHHHhhCCCCcE
Q psy9602 152 LEAWMTEAKTHGFTVMV--QI--GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPA-SVEDLVDYLRDVGEAAPATPL 225 (239)
Q Consensus 152 i~~vve~~~G~rvpVIa--GV--g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~-s~e~iv~yf~~VaeatpdLPI 225 (239)
+..+.+...+..++|.. |. |..+++.-+..++.|.+.|||.|-+..++....- +.+.+.+-..+|.+++++.|+
T Consensus 83 V~~a~~~L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~~~l 161 (260)
T 3r12_A 83 VKLAREELEGTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKGKVV 161 (260)
T ss_dssp HHHHHHHHTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTSEE
T ss_pred HHHHHHHhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCCCcE
No 460
>5rub_A Rubisco (ribulose-1,5-bisphosphate carboxylase(slash)oxygenase); lyase(carbon-carbon); 1.70A {Rhodospirillum rubrum} SCOP: c.1.14.1 d.58.9.1 PDB: 1rus_A 2rus_A 9rub_A* 1rba_A
Probab=56.39 E-value=58 Score=31.34 Aligned_cols=115 Identities=14% Similarity=-0.003 Sum_probs=68.3
Q ss_pred EEeehhhHHHHHHHHhhHHhhhcCCCCEEEe-ccccCCcCCCHHHHHHHHHHHHH----HhcCCCceEEEecCCCCHHHH
Q psy9602 104 IIITAGLLLLTCMLLVGITLRMAPIIDQMVN-GTTGEGVSMTTAERKLNLEAWMT----EAKTHGFTVMVQIGGTCFQEV 178 (239)
Q Consensus 104 iv~~A~~~~~~~~l~~~v~~~~~gg~glvV~-GstGE~~sLT~eER~~li~~vve----~~~G~rvpVIaGVg~~St~eA 178 (239)
-++=|.+..+-+.++.-+.....|| +++=- =..+.-.++..+||...+..+++ .++. +.-..++|++.++++.
T Consensus 187 tiiKPklGLsp~~~a~~~ye~~~GG-DfiKDDE~l~sQpf~p~~eR~~~v~eAi~rA~~eTGe-~k~y~~NITa~~~~eM 264 (490)
T 5rub_A 187 TIIKPKLGLRPKPFAEACHAFWLGG-DFIKNDEPQGNQPFAPLRDTIALVADAMRRAQDETGE-AKLFSANITADDPFEI 264 (490)
T ss_dssp EECSSSSCCCHHHHHHHHHHHTTTC-SEEECCTTCSCBTTBCHHHHHHHHHHHHHHHHHHHSS-CCEEEEECCCSSHHHH
T ss_pred EEeccccCCCHHHHHHHHHHHHhcC-CcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHhhCC-ceeEEeccCCCCHHHH
Confidence 3344433344444444344445566 76611 11224667889999876655554 3444 5556679999999999
Q ss_pred HHHHHHHHhC-CCC----EEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 179 VELAKHAESL-NVH----AVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 179 Ielar~A~~a-GAd----aVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
++.+++|+++ |++ ++|+- ++... ...+ .+ +.+.+|++||.++
T Consensus 265 ~~RAe~a~e~~G~~~g~~~vMvd-~~~~G---~sa~-~~---~r~~~~~l~LH~H 311 (490)
T 5rub_A 265 IARGEYVLETFGENASHVALLVD-GYVAG---AAAI-TT---ARRRFPDNFLHYH 311 (490)
T ss_dssp HHHHHHHHHHHGGGGGGEEEEEE-TTTSC---HHHH-HH---HHHHCTTSCEEEE
T ss_pred HHHHHHHHHhcCCccCceEEEEc-ccccc---HHHH-HH---HHhcCCCCEEEeC
Confidence 9999999996 765 56664 22222 2322 22 4444557777665
No 461
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=56.33 E-value=74 Score=28.35 Aligned_cols=88 Identities=18% Similarity=0.139 Sum_probs=54.3
Q ss_pred hcCCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCC---C-C--------------HHHHHHHHHHHH
Q psy9602 125 MAPIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGG---T-C--------------FQEVVELAKHAE 186 (239)
Q Consensus 125 ~~gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~---~-S--------------t~eAIelar~A~ 186 (239)
++.|.+ ++|-.+|+ ..+ ++++.+.+. ++|+|+-... . + .+...+.++.|.
T Consensus 120 l~aGa~-iINdVsg~----~d~---~m~~v~a~~----~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~ 187 (294)
T 2dqw_A 120 LKLGAH-LLNDVTGL----RDE---RMVALAARH----GVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRAL 187 (294)
T ss_dssp HHHTCS-EEECSSCS----CCH---HHHHHHHHH----TCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHH
T ss_pred HHhCCC-EEEECCCC----CCh---HHHHHHHHh----CCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHH
Confidence 343444 67888887 223 556666654 5787774432 1 1 335566788899
Q ss_pred hCCCCEEEECCCCCCCCCCHH---HHHHHHHHHHhhCCCCcEEE
Q psy9602 187 SLNVHAVLCLPELFFTPASVE---DLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 187 ~aGAdaVlV~PP~y~~~~s~e---~iv~yf~~VaeatpdLPIiL 227 (239)
++|.+-+++=|-..|.. +.+ ++++.++.+.+ . +.|+++
T Consensus 188 ~~Gi~~IilDPG~Gf~k-t~~~n~~ll~~l~~~~~-~-g~Pvl~ 228 (294)
T 2dqw_A 188 SAGVPQVVLDPGFGFGK-LLEHNLALLRRLDEIVA-L-GHPVLV 228 (294)
T ss_dssp HTTCSCEEEECCTTSSC-CHHHHHHHHHTHHHHHT-T-SSCBEE
T ss_pred HCCCCcEEEcCCCCccc-CHHHHHHHHHHHHHHhc-C-CCCEEE
Confidence 99999666666555655 554 55566666654 3 788776
No 462
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=56.33 E-value=34 Score=30.69 Aligned_cols=70 Identities=16% Similarity=0.091 Sum_probs=50.3
Q ss_pred HHHHHHHhcCCCceEE--Eec--CCCCHHHHHHHHHHHHhCCCCEEEECCCCCC-CCCCHHHHHHHHHHHHhhCC
Q psy9602 152 LEAWMTEAKTHGFTVM--VQI--GGTCFQEVVELAKHAESLNVHAVLCLPELFF-TPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 152 i~~vve~~~G~rvpVI--aGV--g~~St~eAIelar~A~~aGAdaVlV~PP~y~-~~~s~e~iv~yf~~Vaeatp 221 (239)
++.+.+.+++..++|. +|. |..+++.-+..++.|.+.|||.|-+..++.. +..+.+.+.+-.++|.++++
T Consensus 98 V~~a~~~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~ 172 (288)
T 3oa3_A 98 VSRAVQYLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAK 172 (288)
T ss_dssp HHHHHHHTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhc
Confidence 4444555544345554 344 4578888889999999999999988877643 21277899999999999983
No 463
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=56.12 E-value=21 Score=32.13 Aligned_cols=84 Identities=15% Similarity=0.143 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCC--------------CCCCCCHHHHHHHH
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPEL--------------FFTPASVEDLVDYL 213 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~--------------y~~~~s~e~iv~yf 213 (239)
|.++++.+.+..+. +.|||.+..+..+- ||.+++.|+|-++++..- -|.. ..+-+.++-
T Consensus 13 r~~il~~l~~~i~~-~~~iig~gaGtGls-----Ak~~e~gGaDlii~ynsGrfR~~G~~slag~lpygn-aN~iv~e~~ 85 (286)
T 2p10_A 13 RSELVDRFQKKIRA-GEPIIGGGAGTGLS-----AKSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAYGN-ANQIVVDMA 85 (286)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEEESSHHH-----HHHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTEEE-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhc-CCceEEEecccchh-----hHHHHhCCCCEEEEeccchhhhcCccchhhhccccC-HHHHHHHHH
Q ss_pred HHHHhhCCCCcEEEEeCCCCccccC
Q psy9602 214 RDVGEAAPATPLFYYHIPMFTRVTL 238 (239)
Q Consensus 214 ~~VaeatpdLPIiLYN~P~~TG~~L 238 (239)
++|.-.+.++||+-.=++.--+..+
T Consensus 86 ~evlp~v~~iPV~Agv~~~DP~~~~ 110 (286)
T 2p10_A 86 REVLPVVRHTPVLAGVNGTDPFMVM 110 (286)
T ss_dssp HHHGGGCSSSCEEEEECTTCTTCCH
T ss_pred HhhhccCCCCCEEEEECCcCCCcCH
No 464
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=56.08 E-value=14 Score=30.48 Aligned_cols=55 Identities=16% Similarity=0.080 Sum_probs=33.0
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH-----HHHHHHHHHhhC-CCCcEEE
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVED-----LVDYLRDVGEAA-PATPLFY 227 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~-----iv~yf~~Vaeat-pdLPIiL 227 (239)
+++|++..+.++ ++.|. .|||.+.+.|-+- .. +..+ =.++++.+.+.. +++||+.
T Consensus 89 ~~ig~s~~t~~e----~~~A~-~GaDyv~~g~vf~-t~-sk~~~~~~~g~~~l~~~~~~~~~~iPvia 149 (210)
T 3ceu_A 89 GHVSCSCHSVEE----VKNRK-HFYDYVFMSPIYD-SI-SKVNYYSTYTAEELREAQKAKIIDSKVMA 149 (210)
T ss_dssp SEEEEEECSHHH----HHTTG-GGSSEEEECCCC-----------CCCCHHHHHHHHHTTCSSTTEEE
T ss_pred CEEEEecCCHHH----HHHHh-hCCCEEEECCcCC-CC-CCCCCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 356676677666 45566 8999999876421 11 1111 136778888762 2799875
No 465
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=55.87 E-value=1.1e+02 Score=27.25 Aligned_cols=106 Identities=12% Similarity=-0.003 Sum_probs=68.4
Q ss_pred hhHHhhhcCCCC---EEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEE
Q psy9602 119 VGITLRMAPIID---QMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLC 195 (239)
Q Consensus 119 ~~v~~~~~gg~g---lvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV 195 (239)
..++..++.|.+ ++++ .|...+=..++-.+-++.+++.+.+.-++||+=.+-.+.++.++.++.|.++|||.|=-
T Consensus 130 ~Ea~~Ai~~GAdEIDmVIN--ig~lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia~eaGADfVKT 207 (288)
T 3oa3_A 130 SEAKRAMQNGASELDMVMN--YPWLSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTADEIIAGCVLSSLAGADYVKT 207 (288)
T ss_dssp HHHHHHHHTTCSEEEEECC--HHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEEEee--hhhhcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCHHHHHHHHHHHHHcCCCEEEc
Confidence 355666777764 3444 22222224466777778888877651278888888888899999999999999999988
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhC-CCCcEEE
Q psy9602 196 LPELFFTPASVEDLVDYLRDVGEAA-PATPLFY 227 (239)
Q Consensus 196 ~PP~y~~~~s~e~iv~yf~~Vaeat-pdLPIiL 227 (239)
..-|.....+.+++ .-++++.+.. +++||..
T Consensus 208 STGf~~~GAT~edv-~lmr~~v~~~g~~v~VKA 239 (288)
T 3oa3_A 208 STGFNGPGASIENV-SLMSAVCDSLQSETRVKA 239 (288)
T ss_dssp CCSSSSCCCCHHHH-HHHHHHHHHSSSCCEEEE
T ss_pred CCCCCCCCCCHHHH-HHHHHHHHHhCCCceEEE
Confidence 74332222266665 4556665532 2566653
No 466
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=55.65 E-value=19 Score=32.25 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHH---hhCCCCcEEEEeC
Q psy9602 174 CFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVG---EAAPATPLFYYHI 230 (239)
Q Consensus 174 St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Va---eatpdLPIiLYN~ 230 (239)
+.+.+++.++...+.|||-+=|--..-... .++++.+....|. +.+ ++||.|--+
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~~v~-~~eem~rvv~~i~~~~~~~-~vpisIDT~ 92 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDGLLD-ARTEMTTFLNLIMSEPEIA-RVPVMIDSS 92 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCTTSC-HHHHHHHHHHHHHTCHHHH-TSCEEEECS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCC-HHHHHHHHHHHHHHhhhcC-CCeEEEeCC
Confidence 578999999999999999999876432222 4566666666665 345 899988643
No 467
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=55.45 E-value=9.6 Score=35.13 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=63.6
Q ss_pred hhcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEe-----------------cC--------------
Q psy9602 124 RMAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQ-----------------IG-------------- 171 (239)
Q Consensus 124 ~~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaG-----------------Vg-------------- 171 (239)
+-+.|++++ ..++. +=|...|+...+..+-.+++||+= ..
T Consensus 164 ~A~AGADiVAPSdMM--------DGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~f~~GDrktYQmd 235 (337)
T 1w5q_A 164 HAEAGAQVVAPSDMM--------DGRIGAIREALESAGHTNVRVMAYSAKYASAYYGPFRDAVGSASNLGKGNRATYQMD 235 (337)
T ss_dssp HHHTTCSEEEECSCC--------TTHHHHHHHHHHHTTCTTCEEEEEEEEBCCGGGHHHHHC----------CGGGTSBC
T ss_pred HHHcCCCeEeccccc--------ccHHHHHHHHHHHCCCCCceeehhHHHHHHHHHHHHHHHhcCCcccCCCCccccCCC
Confidence 345666665 44432 668888888888765446888752 11
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 172 GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 172 ~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
-.+.++|+..+..=.+-|||-|||=|-..| ++-.+.+.+.+ ++|+..||..
T Consensus 236 paN~~EAlrE~~~Di~EGAD~vMVKPal~Y--------LDIir~vk~~~-~~PvaaYqVS 286 (337)
T 1w5q_A 236 PANSDEALHEVAADLAEGADMVMVKPGMPY--------LDIVRRVKDEF-RAPTFVYQVS 286 (337)
T ss_dssp TTCSHHHHHHHHHHHHTTCSEEEEESCGGG--------HHHHHHHHHHH-CSCEEEEECH
T ss_pred CCChHHHHHHHHhhHHhCCCEEEEcCCCch--------HHHHHHHHHhc-CCCEEEEEcC
Confidence 113578988888888889999999985433 34566777778 8999999964
No 468
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=55.42 E-value=28 Score=31.28 Aligned_cols=62 Identities=10% Similarity=-0.047 Sum_probs=40.5
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
++++.+.+.+.+ .+||++|-|=.+.+++. .+.++|||+|.+-.-.+-. + +-++++++++..|
T Consensus 215 e~V~~I~~~~~~-~iPV~vGGGIrs~Eda~----~ll~aGAD~VVVGSAav~d--~---~Pelv~e~a~~~~ 276 (286)
T 3vk5_A 215 EVVRHFRKGLGP-DQVLFVSGNVRSGRQVT----EYLDSGADYVGFAGALEQP--D---WRSALAEIAGRRP 276 (286)
T ss_dssp HHHHHHHHHSCT-TCEEEEESSCCSHHHHH----HHHHTTCSEEEESGGGSST--T---HHHHHHHHHC---
T ss_pred HHHHHHHHhcCC-CCCEEEEeCCCCHHHHH----HHHHcCCCEEEECchhhcC--C---CHHHHHHHHHhCC
Confidence 677777777754 58999997776666544 4556899999998654322 1 3356666666553
No 469
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=55.26 E-value=29 Score=31.25 Aligned_cols=75 Identities=12% Similarity=0.092 Sum_probs=55.2
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
+.++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+. +--|.. + . + ++.+..|.+++ +
T Consensus 179 ~~~~d~~~v~avR~~~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~--iEqP~~--~-~--d-~~~~~~l~~~~-~ 248 (372)
T 3tj4_A 179 DPNIDIARLTAVRERVDS-AVRIAIDGNGKWDLPTCQRFCAAAKDLDIYW--FEEPLW--Y-D--D-VTSHARLARNT-S 248 (372)
T ss_dssp SHHHHHHHHHHHHHHSCT-TCEEEEECTTCCCHHHHHHHHHHTTTSCEEE--EESCSC--T-T--C-HHHHHHHHHHC-S
T ss_pred CHHHHHHHHHHHHHHcCC-CCcEEeeCCCCCCHHHHHHHHHHHhhcCCCE--EECCCC--c-h--h-HHHHHHHHhhc-C
Confidence 456678889999998876 79999855 5678999999999998886543 344432 2 1 1 45677888888 7
Q ss_pred CcEEEE
Q psy9602 223 TPLFYY 228 (239)
Q Consensus 223 LPIiLY 228 (239)
+||+.-
T Consensus 249 iPIa~d 254 (372)
T 3tj4_A 249 IPIALG 254 (372)
T ss_dssp SCEEEC
T ss_pred CCEEeC
Confidence 999863
No 470
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=55.22 E-value=18 Score=29.83 Aligned_cols=55 Identities=18% Similarity=0.149 Sum_probs=36.5
Q ss_pred HhcCCCceEEEecCCCC----HH--HHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEE
Q psy9602 158 EAKTHGFTVMVQIGGTC----FQ--EVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLF 226 (239)
Q Consensus 158 ~~~G~rvpVIaGVg~~S----t~--eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIi 226 (239)
..++ ++++++.....+ .+ +..++++.+.+.|++++.+. +. ++.+.+.+.+ ++|++
T Consensus 13 ~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~--------~~----~~i~~i~~~~-~~p~i 73 (234)
T 1yxy_A 13 QLKG-GIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN--------SV----RDIKEIQAIT-DLPII 73 (234)
T ss_dssp HHTT-SCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE--------SH----HHHHHHHTTC-CSCEE
T ss_pred HHhC-CEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC--------CH----HHHHHHHHhC-CCCEE
Confidence 3355 566666554433 56 77888999999999998764 11 3466676667 78874
No 471
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=55.16 E-value=61 Score=29.02 Aligned_cols=52 Identities=10% Similarity=0.077 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 176 QEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
+.+-.++..+...|++-.++.||-|..+ ++++++.+.+++.. +..+-+++.|
T Consensus 160 rva~Sl~~~~~~~g~~v~~~~P~~~~~~---~~~~~~~~~~a~~~-G~~~~~~~d~ 211 (307)
T 2i6u_A 160 NMAHSLLLGGVTAGIHVTVAAPEGFLPD---PSVRAAAERRAQDT-GASVTVTADA 211 (307)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCCC---HHHHHHHHHHHHHH-TCCEEEESCH
T ss_pred CcHHHHHHHHHHCCCEEEEECCccccCC---HHHHHHHHHHHHHc-CCeEEEEECH
Confidence 7788889999999999999999888665 66888888887776 6677777665
No 472
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=54.69 E-value=30 Score=28.49 Aligned_cols=42 Identities=12% Similarity=-0.129 Sum_probs=30.1
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCC
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPE 198 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP 198 (239)
++++.+.+.+ ++|++++-+-.+.++ ++.+.++|||++++...
T Consensus 64 ~~i~~i~~~~---~ipv~v~ggi~~~~~----~~~~l~~Gad~V~lg~~ 105 (244)
T 2y88_A 64 ELLAEVVGKL---DVQVELSGGIRDDES----LAAALATGCARVNVGTA 105 (244)
T ss_dssp HHHHHHHHHC---SSEEEEESSCCSHHH----HHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHhc---CCcEEEECCCCCHHH----HHHHHHcCCCEEEECch
Confidence 5666666654 589999776666554 56666789999998753
No 473
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=54.55 E-value=50 Score=29.76 Aligned_cols=59 Identities=12% Similarity=0.053 Sum_probs=36.2
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECC-CC---CCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLP-EL---FFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~P-P~---y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
++++++.++.... .+.++.+.++|+|++.+.. |. +..+ +........+.+.+ ++||++=
T Consensus 155 g~~v~~~v~~~~~---~e~a~~~~~agad~i~i~~~~~~~~~~~~---~~~~~~i~~l~~~~-~~pvi~g 217 (393)
T 2qr6_A 155 GEIVAVRVSPQNV---REIAPIVIKAGADLLVIQGTLISAEHVNT---GGEALNLKEFIGSL-DVPVIAG 217 (393)
T ss_dssp TSCCEEEECTTTH---HHHHHHHHHTTCSEEEEECSSCCSSCCCC--------CHHHHHHHC-SSCEEEE
T ss_pred CCeEEEEeCCccH---HHHHHHHHHCCCCEEEEeCCccccccCCC---cccHHHHHHHHHhc-CCCEEEC
Confidence 4688877765443 5566777788999987752 21 2222 21233466777888 8999983
No 474
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=54.54 E-value=13 Score=32.29 Aligned_cols=50 Identities=10% Similarity=0.086 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC--CcE
Q psy9602 173 TCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA--TPL 225 (239)
Q Consensus 173 ~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd--LPI 225 (239)
.+++.-+..++.|.+.|||.|-+..++.... + .+.+-..+|.+++++ +|+
T Consensus 85 ~~~~~k~~e~~~Av~~GAdEID~vinig~~~--~-~v~~ei~~v~~a~~~~g~~l 136 (234)
T 1n7k_A 85 APLEVKLVEAQTVLEAGATELDVVPHLSLGP--E-AVYREVSGIVKLAKSYGAVV 136 (234)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEECCCGGGCH--H-HHHHHHHHHHHHHHHTTCEE
T ss_pred CcHHHHHHHHHHHHHcCCCEEEEeccchHHH--H-HHHHHHHHHHHHHhhcCCeE
Confidence 6788888899999999999998887665433 2 777777777776532 564
No 475
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=54.42 E-value=16 Score=32.47 Aligned_cols=72 Identities=10% Similarity=-0.039 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEE
Q psy9602 149 KLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYY 228 (239)
Q Consensus 149 ~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLY 228 (239)
.+++..+++.+ ++|||+.=|=.+.+++.+.. ++||++|++...++..+ ....-..|-+.+.++. +-.+++-
T Consensus 165 ~~ll~~i~~~~---~iPviaaGGI~~~~dv~~al----~~GA~gV~vGs~~~~~~-e~~~~~~~k~~~~~~~-~~~~~~~ 235 (326)
T 3bo9_A 165 FVLVNKVSRSV---NIPVIAAGGIADGRGMAAAF----ALGAEAVQMGTRFVASV-ESDVHPVYKEKIVKAS-IRDTVVT 235 (326)
T ss_dssp HHHHHHHHHHC---SSCEEEESSCCSHHHHHHHH----HHTCSEEEESHHHHTBS-SCCSCHHHHHHHHHCC-TTCEEEE
T ss_pred HHHHHHHHHHc---CCCEEEECCCCCHHHHHHHH----HhCCCEEEechHHHcCc-cccccHHHHHHHHhcc-cccEEEe
Confidence 35566666654 58998744444455554443 36999999998877654 2112223333444554 4455544
Q ss_pred e
Q psy9602 229 H 229 (239)
Q Consensus 229 N 229 (239)
.
T Consensus 236 ~ 236 (326)
T 3bo9_A 236 G 236 (326)
T ss_dssp C
T ss_pred c
Confidence 3
No 476
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=54.32 E-value=22 Score=31.66 Aligned_cols=76 Identities=14% Similarity=0.190 Sum_probs=55.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEec--CCCCHHHHHHHHHHHHhCCCCEEEECCCCC-------C---CCC-CHHH
Q psy9602 142 SMTTAERKLNLEAWMTEAKTHGFTVMVQI--GGTCFQEVVELAKHAESLNVHAVLCLPELF-------F---TPA-SVED 208 (239)
Q Consensus 142 sLT~eER~~li~~vve~~~G~rvpVIaGV--g~~St~eAIelar~A~~aGAdaVlV~PP~y-------~---~~~-s~e~ 208 (239)
.+|.+|-...++.++..+ ++||++=. +-.+..++.+.++...++||++|-+---.+ - +.+ ++++
T Consensus 61 ~vt~~em~~~~~~I~~~~---~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e 137 (295)
T 1s2w_A 61 EASWTQVVEVLEFMSDAS---DVPILLDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEE 137 (295)
T ss_dssp ---CHHHHHHHHHHHHTC---SSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHH
T ss_pred CCCHHHHHHHHHHHHhcC---CCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHH
Confidence 478888888888888876 57999833 223678999999999999999999854221 0 222 7888
Q ss_pred HHHHHHHHHhhC
Q psy9602 209 LVDYLRDVGEAA 220 (239)
Q Consensus 209 iv~yf~~Vaeat 220 (239)
.++..+++.++.
T Consensus 138 ~~~rI~Aa~~a~ 149 (295)
T 1s2w_A 138 FALKIKACKDSQ 149 (295)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 888888888875
No 477
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=54.18 E-value=15 Score=32.15 Aligned_cols=82 Identities=18% Similarity=0.086 Sum_probs=0.0
Q ss_pred CcCCCHHHHHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH-----HHHHHH
Q psy9602 140 GVSMTTAERKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVED-----LVDYLR 214 (239)
Q Consensus 140 ~~sLT~eER~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~-----iv~yf~ 214 (239)
+.+|-..+-..+.+-..+..+| ++|.++ +..+.++.+++.||++++++.|.-........ -.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~---g~i~~~------~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~ 71 (305)
T 2nv1_A 1 MASMAQTGTERVKRGMAEMQKG---GVIMDV------INAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVE 71 (305)
T ss_dssp --------CHHHHHHHHHTTTT---CEEEEE------SSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHH
T ss_pred CcchhcCCcHHHHHHHHHHccC---CeeecC------CHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHH
Q ss_pred HHHhhCCCCcEEEEeCC
Q psy9602 215 DVGEAAPATPLFYYHIP 231 (239)
Q Consensus 215 ~VaeatpdLPIiLYN~P 231 (239)
.|.+.+ ++|+++-+.+
T Consensus 72 ~I~~~~-~iPv~~k~r~ 87 (305)
T 2nv1_A 72 EVMNAV-SIPVMAKARI 87 (305)
T ss_dssp HHHHHC-SSCEEEEECT
T ss_pred HHHHhC-CCCEEecccc
No 478
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=53.99 E-value=12 Score=34.67 Aligned_cols=49 Identities=10% Similarity=0.088 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 175 FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 175 t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
....++.++.+.++|+|++.+..-. . ..+...+..+.+.+..|++|++.
T Consensus 231 ~~~~~~~a~~l~~~G~d~ivi~~a~---g-~~~~~~~~i~~l~~~~p~~pvi~ 279 (491)
T 1zfj_A 231 TSDTFERAEALFEAGADAIVIDTAH---G-HSAGVLRKIAEIRAHFPNRTLIA 279 (491)
T ss_dssp STTHHHHHHHHHHHTCSEEEECCSC---T-TCHHHHHHHHHHHHHCSSSCEEE
T ss_pred chhHHHHHHHHHHcCCCeEEEeeec---C-cchhHHHHHHHHHHHCCCCcEeC
Confidence 3456778888899999999988522 1 33567788888998888899983
No 479
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=53.98 E-value=38 Score=30.17 Aligned_cols=72 Identities=10% Similarity=0.093 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHH-HhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHA-ESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAP 221 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A-~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatp 221 (239)
+.++=.++++.+.+.++. ++++++-+ ++.+.++++++++.. ++.|+ .+--|.. -.+.++.|.+++
T Consensus 172 ~~~~~~e~v~avr~a~g~-~~~l~vDan~~~~~~~a~~~~~~l~~~~~i---~iE~P~~--------~~~~~~~l~~~~- 238 (371)
T 2ps2_A 172 EPVTDAKRITAALANQQP-DEFFIVDANGKLSVETALRLLRLLPHGLDF---ALEAPCA--------TWRECISLRRKT- 238 (371)
T ss_dssp CHHHHHHHHHHHTTTCCT-TCEEEEECTTBCCHHHHHHHHHHSCTTCCC---EEECCBS--------SHHHHHHHHTTC-
T ss_pred CHHHHHHHHHHHHHhcCC-CCEEEEECCCCcCHHHHHHHHHHHHhhcCC---cCcCCcC--------CHHHHHHHHhhC-
Confidence 466667888888888766 78998855 466889999999999 88887 3444432 246778888888
Q ss_pred CCcEEEE
Q psy9602 222 ATPLFYY 228 (239)
Q Consensus 222 dLPIiLY 228 (239)
++||+.-
T Consensus 239 ~iPI~~d 245 (371)
T 2ps2_A 239 DIPIIYD 245 (371)
T ss_dssp CSCEEES
T ss_pred CCCEEeC
Confidence 7998864
No 480
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=53.83 E-value=50 Score=28.13 Aligned_cols=67 Identities=12% Similarity=0.216 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 148 RKLNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 148 R~~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
..++++-+.+.+...+..+++..... .+...+..+...+.++|++++.|+ .. .+ ... ++|+++
T Consensus 79 ~~~~~~gi~~~a~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~--~~------------~~-~~~-~iPvV~ 141 (333)
T 3jvd_A 79 YSESLQTIQQDLKAAGYQMLVAEANS-VQAQDVVMESLISIQAAGIIHVPV--VG------------SI-APE-GIPMVQ 141 (333)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEECCS-HHHHHHHHHHHHHHTCSEEEECCC--TT------------CC-C-C-CSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCC-hHHHHHHHHHHHhCCCCEEEEcch--HH------------HH-hhC-CCCEEE
Confidence 33444444333332235666655555 777778888888889999999886 11 12 234 799999
Q ss_pred EeCC
Q psy9602 228 YHIP 231 (239)
Q Consensus 228 YN~P 231 (239)
+|.+
T Consensus 142 ~~~~ 145 (333)
T 3jvd_A 142 LTRG 145 (333)
T ss_dssp ECC-
T ss_pred ECcc
Confidence 9875
No 481
>1luc_B Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_B 1bsl_A 1xkj_A 3fgc_B*
Probab=53.43 E-value=20 Score=31.43 Aligned_cols=45 Identities=13% Similarity=0.091 Sum_probs=35.6
Q ss_pred CCHHHHHHHHH-HHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhC
Q psy9602 173 TCFQEVVELAK-HAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAA 220 (239)
Q Consensus 173 ~St~eAIelar-~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeat 220 (239)
-+.+++++.++ ..+++|+|.+++.+|.. + +.++..+.++.+++..
T Consensus 274 Gtpe~v~~~l~~~~~~~G~d~~~l~~~~~--~-~~~~~~~~~~~la~~v 319 (324)
T 1luc_B 274 GTYEESTQAARVAIECCGAADLLMSFESM--E-DKAQQRAVIDVVNANI 319 (324)
T ss_dssp ESHHHHHHHHHHHHHHHTCSEEEEECTTC--C-CHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHHhCCCEEEEEeCCC--C-CHHHHHHHHHHHHHhh
Confidence 36778888877 58889999999987653 3 5688888888888876
No 482
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=53.33 E-value=33 Score=29.80 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=54.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEec---CCCCHHHHHHHHHHHHhCCCCEEEECCCCCC--CC-CCHHHHHHHHHH
Q psy9602 142 SMTTAERKLNLEAWMTEAKTHGFTVMVQI---GGTCFQEVVELAKHAESLNVHAVLCLPELFF--TP-ASVEDLVDYLRD 215 (239)
Q Consensus 142 sLT~eER~~li~~vve~~~G~rvpVIaGV---g~~St~eAIelar~A~~aGAdaVlV~PP~y~--~~-~s~e~iv~yf~~ 215 (239)
.+|.+|-...++.++..+ ++||++=. .+.+. .+.++...++||++|-+---... +. .+.+++.+..+.
T Consensus 62 ~vt~~em~~~~~~I~r~~---~~pviaD~~~Gyg~~~---~~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~~~~I~a 135 (255)
T 2qiw_A 62 NMNFADYMAVVKKITSAV---SIPVSVDVESGYGLSP---ADLIAQILEAGAVGINVEDVVHSEGKRVREAQEHADYIAA 135 (255)
T ss_dssp CSCHHHHHHHHHHHHHHC---SSCEEEECTTCTTCCH---HHHHHHHHHTTCCEEEECSEEGGGTTEECCHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhcC---CCCEEeccCCCcCcHH---HHHHHHHHHcCCcEEEECCCCCCCCCcccCHHHHHHHHHH
Confidence 689999999999999887 47999932 34445 88888888899999998753211 11 156888888988
Q ss_pred HHhh
Q psy9602 216 VGEA 219 (239)
Q Consensus 216 Vaea 219 (239)
+.++
T Consensus 136 ~~~a 139 (255)
T 2qiw_A 136 ARQA 139 (255)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8887
No 483
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=53.09 E-value=69 Score=28.53 Aligned_cols=92 Identities=10% Similarity=0.073 Sum_probs=53.4
Q ss_pred CCCCEEEeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEecC-----CCCHHHHHHHH----HHH-HhCCC--CEEE
Q psy9602 127 PIIDQMVNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQIG-----GTCFQEVVELA----KHA-ESLNV--HAVL 194 (239)
Q Consensus 127 gg~glvV~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGVg-----~~St~eAIela----r~A-~~aGA--daVl 194 (239)
.|.. +|+-.+|+-. .++..+++..+.+. ++|||+-.. ..+.++-++++ +.+ .++|. +-++
T Consensus 105 ~Ga~-iINdIs~~~~---d~~~~~~~~l~a~~----ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~Ii 176 (300)
T 3k13_A 105 QGKS-IVNSISLKEG---EEVFLEHARIIKQY----GAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDII 176 (300)
T ss_dssp SSCC-EEEEECSTTC---HHHHHHHHHHHHHH----TCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEE
T ss_pred CCCC-EEEeCCcccC---ChhHHHHHHHHHHh----CCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEE
Confidence 4444 4555555422 34445777777765 468777543 23344444443 332 67788 5577
Q ss_pred ECCCCC-CCCCC-------HHHHHHHHHHHHhhCCCCcEEE
Q psy9602 195 CLPELF-FTPAS-------VEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 195 V~PP~y-~~~~s-------~e~iv~yf~~VaeatpdLPIiL 227 (239)
+=|-.. +.. + .-++++.++.+.+..|+.|+++
T Consensus 177 lDPgig~~gk-~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~ 216 (300)
T 3k13_A 177 FDPNVLAVAT-GIEEHNNYAVDFIEATGWIRKNLPGAHVSG 216 (300)
T ss_dssp EECCCCCCSS-SCGGGTTHHHHHHHHHHHHHHHSTTCEECC
T ss_pred EeCCCCccCC-ChHHhhHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 666443 443 3 3358888888887777788764
No 484
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=52.92 E-value=9.5 Score=35.02 Aligned_cols=90 Identities=13% Similarity=0.154 Sum_probs=63.5
Q ss_pred hcCCCCEE-EeccccCCcCCCHHHHHHHHHHHHHHhcCCCceEEEec---------------CC--------------CC
Q psy9602 125 MAPIIDQM-VNGTTGEGVSMTTAERKLNLEAWMTEAKTHGFTVMVQI---------------GG--------------TC 174 (239)
Q Consensus 125 ~~gg~glv-V~GstGE~~sLT~eER~~li~~vve~~~G~rvpVIaGV---------------g~--------------~S 174 (239)
-+.|++++ ..++. +=|...|+...+..+-.+++||+=. ++ .+
T Consensus 160 A~AGADiVAPSdMM--------DGrV~aIR~aLd~~G~~~v~ImsYsaKyASafYGPFRdAa~Sap~fGDrktYQmdpaN 231 (328)
T 1w1z_A 160 AEAGADFVSPSDMM--------DGRIGAIREALDETDHSDVGILSYAAKYASSFYGPFRDALHSAPQFGDKSTYQMNPAN 231 (328)
T ss_dssp HHHTCSEEEECSCC--------TTHHHHHHHHHHHTTCTTSEEEEEEEEBCCTTCHHHHHHTTCCCCCSCSTTTSBCTTC
T ss_pred HHcCCCeEeccccc--------ccHHHHHHHHHHhCCCCCceeeehhHHHhhhccchHHHHhccCCCCCCccccCCCCCC
Confidence 35566655 44332 6688888888887654468888621 11 13
Q ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 175 FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 175 t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
.++|+..+..=.+-|||-+||=|-..| ++-.+.+.+.+ ++|+..||..
T Consensus 232 ~~EAlrE~~~Di~EGAD~vMVKPal~Y--------LDIir~vk~~~-~~P~aaYqVS 279 (328)
T 1w1z_A 232 TEEAMKEVELDIVEGADIVMVKPGLAY--------LDIVWRTKERF-DVPVAIYHVS 279 (328)
T ss_dssp SHHHHHHHHHHHHHTCSEEEEESCGGG--------HHHHHHHHHHH-CSCEEEEECH
T ss_pred HHHHHHHHHhhHHhCCCEEEEcCCCch--------HHHHHHHHHhc-CCCEEEEEcc
Confidence 688998888888889999999985433 34566777778 8999999964
No 485
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=52.73 E-value=93 Score=25.69 Aligned_cols=55 Identities=13% Similarity=0.062 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCC--CHHHHHHHHHHHHh---hCCCCcEEEEeCC
Q psy9602 176 QEVVELAKHAESLNVHAVLCLPELFFTPA--SVEDLVDYLRDVGE---AAPATPLFYYHIP 231 (239)
Q Consensus 176 ~eAIelar~A~~aGAdaVlV~PP~y~~~~--s~e~iv~yf~~Vae---atpdLPIiLYN~P 231 (239)
+...+.++.|.++|+..+.+.+.+.-... ..+.+.+.++.+++ .. ++.+.|-|.+
T Consensus 102 ~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~-Gv~l~lE~~~ 161 (290)
T 3tva_A 102 AEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANH-GQAVHLETGQ 161 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTT-TCEEEEECCS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHc-CCEEEEecCC
Confidence 45567788889999999999765431110 23445556666654 45 7888888875
No 486
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=52.71 E-value=71 Score=25.48 Aligned_cols=67 Identities=10% Similarity=-0.023 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEE
Q psy9602 150 LNLEAWMTEAKTHGFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFY 227 (239)
Q Consensus 150 ~li~~vve~~~G~rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiL 227 (239)
++++.+.+...+ .|++++..-.++.+. .++.|.++|||++.+.+-. +++.+....+.+.+. ++++.+
T Consensus 42 ~~i~~l~~~~~~--~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~~-----~~~~~~~~~~~~~~~--g~~~gv 108 (207)
T 3ajx_A 42 SVITAVKKAHPD--KIVFADMKTMDAGEL--EADIAFKAGADLVTVLGSA-----DDSTIAGAVKAAQAH--NKGVVV 108 (207)
T ss_dssp HHHHHHHHHSTT--SEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETTS-----CHHHHHHHHHHHHHH--TCEEEE
T ss_pred HHHHHHHHhCCC--CeEEEEEEecCccHH--HHHHHHhCCCCEEEEeccC-----ChHHHHHHHHHHHHc--CCceEE
No 487
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=52.22 E-value=54 Score=27.74 Aligned_cols=60 Identities=13% Similarity=0.125 Sum_probs=38.1
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIP 231 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P 231 (239)
...++..-+..+..+..+..+...+.|+|++++.++.+ .+. ...++...|++|+++.|.+
T Consensus 37 g~~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~~~~-----~~~----~~~~~~~~p~~p~v~id~~ 96 (296)
T 2hqb_A 37 DVDVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHGHAF-----AEY----FSTIHNQYPDVHFVSFNGE 96 (296)
T ss_dssp CCEEEEECCCCSHHHHHHHHHHHHHTTCCEEEECSTHH-----HHH----HHTTTTSCTTSEEEEESCC
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcCHhH-----HHH----HHHHHHHCCCCEEEEEecC
Confidence 35565544444445556677888888999999875321 122 3345555678999998864
No 488
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=52.19 E-value=33 Score=30.05 Aligned_cols=54 Identities=19% Similarity=0.251 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHH----HHHHHHHHhhC---CCCcEEEEe
Q psy9602 175 FQEVVELAKHAESLNVHAVLCLPELFFTPASVEDL----VDYLRDVGEAA---PATPLFYYH 229 (239)
Q Consensus 175 t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~i----v~yf~~Vaeat---pdLPIiLYN 229 (239)
++..+++++...++|||++.+.-|..... +++.. .-|++.|.+.. |+.|+++|-
T Consensus 178 ~~~~~~~~~~~~~aGad~i~i~d~~~~~l-sp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~ 238 (338)
T 2eja_A 178 TETVLAYLKEQIKAGADVVQIFDSWVNNL-SLEDYGEYVYPYVNYLISELKDFSDTPVIYFF 238 (338)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTGGGS-CHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCccccC-CHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEc
Confidence 34456778888889999999888753222 44443 34555555544 468988774
No 489
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=52.16 E-value=17 Score=32.99 Aligned_cols=55 Identities=16% Similarity=0.113 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH----HHHHHHHHHhhCC------CCcEEEEeC
Q psy9602 175 FQEVVELAKHAESLNVHAVLCLPELFFTPASVED----LVDYLRDVGEAAP------ATPLFYYHI 230 (239)
Q Consensus 175 t~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~----iv~yf~~Vaeatp------dLPIiLYN~ 230 (239)
++..+++++...++|||++++..+..... +++. +.-|++.|.+... +.|++++..
T Consensus 196 ~~~~~~y~~~qi~aGad~i~ifDs~~~~L-sp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~ 260 (368)
T 4exq_A 196 AQAVAAYLNAQIEAGAQAVMIFDTWGGAL-ADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTK 260 (368)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEETTGGGS-CTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEET
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCccccC-CHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcC
Confidence 44566777777889999999876653222 4444 6678889998763 268877654
No 490
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=52.03 E-value=51 Score=32.11 Aligned_cols=98 Identities=15% Similarity=0.080 Sum_probs=58.9
Q ss_pred hhcCCCCEEEeccccCCcCCCHHHHH-H---H-------HHHHHHH-------hcCCCceEEEecCCCCHHHHHHHHHHH
Q psy9602 124 RMAPIIDQMVNGTTGEGVSMTTAERK-L---N-------LEAWMTE-------AKTHGFTVMVQIGGTCFQEVVELAKHA 185 (239)
Q Consensus 124 ~~~gg~glvV~GstGE~~sLT~eER~-~---l-------i~~vve~-------~~G~rvpVIaGVg~~St~eAIelar~A 185 (239)
.+..|.-+.|-|.+|+.+.-..++-. + . .+.+.+. .+|.++.+++.++.. +.+..|
T Consensus 211 ~~~~G~~v~vDg~~G~V~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~T~DG~~~~l~an~~~p------~d~~~a 284 (575)
T 2hwg_A 211 QVKNDDYLILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTV------RDVEGA 284 (575)
T ss_dssp HCCTTCEEEEETTTTEEEESCCHHHHHHHHHHHHHHHHHHHHHGGGTTSCCBCTTSCBCEEEEEESST------HHHHHH
T ss_pred hCCCCCEEEEECCCCEEEeCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccCCCCEEEEEEeCCCH------HHHHHH
Confidence 34556667899999998654433221 1 1 1111111 122245677777653 345678
Q ss_pred HhCCCCEE-------EECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEe
Q psy9602 186 ESLNVHAV-------LCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYH 229 (239)
Q Consensus 186 ~~aGAdaV-------lV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN 229 (239)
.+.|||+| |++..-. .| +.++..+.|..++++.++.|+++=-
T Consensus 285 ~~~GadGVGL~RTE~l~ld~e~-~P-~~~~q~~~~~~~~~~~~g~pv~VRt 333 (575)
T 2hwg_A 285 ERNGAEGVGLYRTEFLFMDRDA-LP-TEEEQFAAYKAVAEACGSQAVIVRT 333 (575)
T ss_dssp HHTTCSSEEEEEHHHHHTTSSS-CC-CHHHHHHHHHHHHHHTTTCCEEEEC
T ss_pred HhcCCCeeeeeeehheeccccc-CC-CHHHHHHHHHHHHHHcCCCceEEEe
Confidence 88999998 3332222 45 7788888889888876578988754
No 491
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=52.00 E-value=17 Score=32.48 Aligned_cols=53 Identities=13% Similarity=0.143 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH----HHHHHHHHHhhCC---------CCcEEEEeC
Q psy9602 177 EVVELAKHAESLNVHAVLCLPELFFTPASVED----LVDYLRDVGEAAP---------ATPLFYYHI 230 (239)
Q Consensus 177 eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~----iv~yf~~Vaeatp---------dLPIiLYN~ 230 (239)
..+++++...++|||++.+..|..-.. +++. +.-|++.|.+... +.|+++|-.
T Consensus 198 ~~~~~~~~~i~aGad~i~i~D~~~~~l-sp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~ 263 (367)
T 1r3s_A 198 ALVPYLVGQVVAGAQALQLFESHAGHL-GPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAK 263 (367)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTGGGS-CHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEET
T ss_pred HHHHHHHHHHHhCCCEEEEecCccccC-CHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcC
Confidence 345667777789999999888754222 6654 3455566665542 489998854
No 492
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=51.72 E-value=47 Score=31.13 Aligned_cols=62 Identities=5% Similarity=-0.055 Sum_probs=41.9
Q ss_pred CceEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 163 GFTVMVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 163 rvpVIaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
++.+.++++.. .+..+.++.+.++|+|++.+-..+.+ .+...+..+.+.+.+|++||+.-+.
T Consensus 243 rl~vga~vG~~--~~~~~~a~~~~~aG~d~v~i~~~~G~----~~~~~~~i~~i~~~~~~~pvi~~~v 304 (514)
T 1jcn_A 243 QLLCGAAVGTR--EDDKYRLDLLTQAGVDVIVLDSSQGN----SVYQIAMVHYIKQKYPHLQVIGGNV 304 (514)
T ss_dssp CBCCEEEECSS--TTHHHHHHHHHHTTCSEEEECCSCCC----SHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred ceeeeeEecCc--hhhHHHHHHHHHcCCCEEEeeccCCc----chhHHHHHHHHHHhCCCCceEeccc
Confidence 44444455432 33577888899999999999554432 2456677788888887899987543
No 493
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=51.64 E-value=33 Score=30.26 Aligned_cols=50 Identities=10% Similarity=0.053 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCCH----HHHHHHHHHHHhhCC------CCcEEEE
Q psy9602 178 VVELAKHAESLNVHAVLCLPELFFTPASV----EDLVDYLRDVGEAAP------ATPLFYY 228 (239)
Q Consensus 178 AIelar~A~~aGAdaVlV~PP~y~~~~s~----e~iv~yf~~Vaeatp------dLPIiLY 228 (239)
.+++++...++|+|++++..|..... ++ +-+..|++.|.+... +.|++++
T Consensus 189 ~~~~~~~~~~aGad~i~i~d~~~~~l-sp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~ 248 (354)
T 3cyv_A 189 VTLYLNAQIKAGAQAVMIFDTWGGVL-TGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLF 248 (354)
T ss_dssp HHHHHHHHHHTTCSEEEEECTTGGGS-CHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEE
T ss_pred HHHHHHHHHHhCCCEEEEeCCccccC-CHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 45567777789999999988753322 65 556678888888872 3775444
No 494
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=51.16 E-value=34 Score=30.76 Aligned_cols=74 Identities=12% Similarity=0.132 Sum_probs=55.8
Q ss_pred CHHHHHHHHHHHHHHhcCCCceEEEec-CCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCC
Q psy9602 144 TTAERKLNLEAWMTEAKTHGFTVMVQI-GGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPA 222 (239)
Q Consensus 144 T~eER~~li~~vve~~~G~rvpVIaGV-g~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~Vaeatpd 222 (239)
..++=.+.++.+.+.++. ++++++=. ++-+.++++++++..++.|.+.+= -|. .+ . + ++.++.|.+++ +
T Consensus 173 ~~~~d~~~v~avR~~~g~-~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE--qP~--~~-~--d-~~~~~~l~~~~-~ 242 (377)
T 3my9_A 173 PHAEELRILETMRGEFGE-RIDLRLDFNQALTPFGAMKILRDVDAFRPTFIE--QPV--PR-R--H-LDAMAGFAAAL-D 242 (377)
T ss_dssp CHHHHHHHHHHHHHHHGG-GSEEEEECTTCCCTTTHHHHHHHHHTTCCSCEE--CCS--CT-T--C-HHHHHHHHHHC-S
T ss_pred cHHHHHHHHHHHHHHhCC-CCeEEEeCCCCcCHHHHHHHHHHHhhcCCCEEE--CCC--Cc-c--C-HHHHHHHHHhC-C
Confidence 456667888999998876 79999955 567889999999999999887653 332 12 1 1 46677888888 7
Q ss_pred CcEEE
Q psy9602 223 TPLFY 227 (239)
Q Consensus 223 LPIiL 227 (239)
+||+.
T Consensus 243 ipIa~ 247 (377)
T 3my9_A 243 TPILA 247 (377)
T ss_dssp SCEEE
T ss_pred CCEEE
Confidence 99986
No 495
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=50.95 E-value=54 Score=30.86 Aligned_cols=75 Identities=15% Similarity=0.128 Sum_probs=54.8
Q ss_pred HhhhcCCCCEEEeccccCC------cCCCHHHHHHHHHHHHHHhcCCCce---EEEecCCCCH------------HHHHH
Q psy9602 122 TLRMAPIIDQMVNGTTGEG------VSMTTAERKLNLEAWMTEAKTHGFT---VMVQIGGTCF------------QEVVE 180 (239)
Q Consensus 122 ~~~~~gg~glvV~GstGE~------~sLT~eER~~li~~vve~~~G~rvp---VIaGVg~~St------------~eAIe 180 (239)
+...+...-+++-.+.++. ..++.++-..+++.+++.. .+| |+++.-+... ..+.+
T Consensus 32 ~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~---~vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e 108 (420)
T 2fiq_A 32 AFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKV---GFARERIILGGDHLGPNCWQQENVDAAMEKSVE 108 (420)
T ss_dssp HHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHH---TCCGGGEEEEEEEESSGGGTTSBHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHc---CcCcceEEEECCCCCCccccccchhhhhhhHHH
Confidence 3344455557777777774 3455899999999999876 578 8887754432 45557
Q ss_pred HHHHHHhCCCCEEEECCCC
Q psy9602 181 LAKHAESLNVHAVLCLPEL 199 (239)
Q Consensus 181 lar~A~~aGAdaVlV~PP~ 199 (239)
+++.|.++|++.||+=..+
T Consensus 109 ~i~~aI~aGFtSVMiD~S~ 127 (420)
T 2fiq_A 109 LVKAYVRAGFSKIHLDASM 127 (420)
T ss_dssp HHHHHHHTTCCEEEECCCS
T ss_pred HHHHHHHhCCCEEEECCCC
Confidence 8999999999999998765
No 496
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=50.71 E-value=18 Score=31.14 Aligned_cols=82 Identities=9% Similarity=-0.051 Sum_probs=46.3
Q ss_pred hcCCCCEEEeccccCC------cCCCHHHHHHHHHHHHHHhcCCCceEEE--ecCCCCHHHHHHHHHHHHhCCCCEEEEC
Q psy9602 125 MAPIIDQMVNGTTGEG------VSMTTAERKLNLEAWMTEAKTHGFTVMV--QIGGTCFQEVVELAKHAESLNVHAVLCL 196 (239)
Q Consensus 125 ~~gg~glvV~GstGE~------~sLT~eER~~li~~vve~~~G~rvpVIa--GVg~~St~eAIelar~A~~aGAdaVlV~ 196 (239)
.+.+.+.+.+|..-.. ..+.. +.++.+.+.... ++||++ ||+..+. ..+.++||+++.+.
T Consensus 152 ~~~GaDyI~vgpvf~T~tK~~~~~~gl----~~l~~~~~~~~~-~iPvvAiGGI~~~ni-------~~~~~aGa~gvav~ 219 (243)
T 3o63_A 152 AAGDADYFCVGPCWPTPTKPGRAAPGL----GLVRVAAELGGD-DKPWFAIGGINAQRL-------PAVLDAGARRIVVV 219 (243)
T ss_dssp HHSSCSEEEECCSSCCCC-----CCCH----HHHHHHHTC----CCCEEEESSCCTTTH-------HHHHHTTCCCEEES
T ss_pred hhCCCCEEEEcCccCCCCCCCcchhhH----HHHHHHHHhccC-CCCEEEecCCCHHHH-------HHHHHcCCCEEEEe
Confidence 3456676655542111 12333 334444443222 588887 6644443 34456899999998
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhh
Q psy9602 197 PELFFTPASVEDLVDYLRDVGEA 219 (239)
Q Consensus 197 PP~y~~~~s~e~iv~yf~~Vaea 219 (239)
.-.+-.+ ++.+...-|....+.
T Consensus 220 sai~~a~-dp~~a~~~l~~~~~~ 241 (243)
T 3o63_A 220 RAITSAD-DPRAAAEQLRSALTA 241 (243)
T ss_dssp HHHHTCS-SHHHHHHHHHHHHHT
T ss_pred HHHhCCC-CHHHHHHHHHHHHHh
Confidence 7655555 777777777666554
No 497
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=50.38 E-value=45 Score=31.08 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=47.5
Q ss_pred eEEEecC----CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHHhhCCCCcEEEEeCCC
Q psy9602 165 TVMVQIG----GTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVEDLVDYLRDVGEAAPATPLFYYHIPM 232 (239)
Q Consensus 165 pVIaGVg----~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~iv~yf~~VaeatpdLPIiLYN~P~ 232 (239)
-.|+|.. +.+...+-.++..+...|++-.++.||-|..+ +++++..+.+++.. +..+-+++.|.
T Consensus 194 va~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~---~~~~~~a~~~a~~~-G~~i~~~~d~~ 261 (399)
T 3q98_A 194 IAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLI---PDVVEVAKNNAKAS-GGSFRQVTSME 261 (399)
T ss_dssp EEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCC---HHHHHHHHHHHHHH-TCEEEEESCHH
T ss_pred EEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCC---HHHHHHHHHHHHHc-CCEEEEEcCHH
Confidence 3456653 34457788899999999999999998877654 56777777777777 67777777763
No 498
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=49.95 E-value=21 Score=31.18 Aligned_cols=67 Identities=10% Similarity=0.044 Sum_probs=45.8
Q ss_pred EEecCCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCHHH--------------HHHHHHHHHhhCCCCcEEE--EeC
Q psy9602 167 MVQIGGTCFQEVVELAKHAESLNVHAVLCLPELFFTPASVED--------------LVDYLRDVGEAAPATPLFY--YHI 230 (239)
Q Consensus 167 IaGVg~~St~eAIelar~A~~aGAdaVlV~PP~y~~~~s~e~--------------iv~yf~~VaeatpdLPIiL--YN~ 230 (239)
++-.|..+.+.+++.++..++.|||.+=+--|+.-+..+=.. +.+.|+.+.+--...|+++ |-|
T Consensus 19 yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N 98 (252)
T 3tha_A 19 YTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYN 98 (252)
T ss_dssp EEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 446789999999999999999999999999998432211011 1344444444322479888 766
Q ss_pred CCC
Q psy9602 231 PMF 233 (239)
Q Consensus 231 P~~ 233 (239)
|..
T Consensus 99 ~i~ 101 (252)
T 3tha_A 99 LIF 101 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 499
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=49.92 E-value=26 Score=33.80 Aligned_cols=56 Identities=7% Similarity=-0.175 Sum_probs=34.4
Q ss_pred EEEecCCCCHHHHHHHHHHHHhCC---CCEEEECCCCCC--CCCCHH---HHHHHHHHHHhh------CCCCcEEE
Q psy9602 166 VMVQIGGTCFQEVVELAKHAESLN---VHAVLCLPELFF--TPASVE---DLVDYLRDVGEA------APATPLFY 227 (239)
Q Consensus 166 VIaGVg~~St~eAIelar~A~~aG---AdaVlV~PP~y~--~~~s~e---~iv~yf~~Vaea------tpdLPIiL 227 (239)
.++|++..+.++ ++.|.+.| +|.+.+.|-+.. ++ +.. -=.+.++.+.+. . ++|++.
T Consensus 109 ~iiG~S~ht~ee----a~~A~~~G~~~aDYv~~Gpvf~T~tK~-~~~~~~~G~~~l~~i~~~~~~~~~~-~iPvvA 178 (540)
T 3nl6_A 109 MVIGWSVGFPEE----VDELSKMGPDMVDYIGVGTLFPTLTKK-NPKKAPMGTAGAIRVLDALERNNAH-WCRTVG 178 (540)
T ss_dssp SEEEEEECSHHH----HHHHHHTCC--CCEEEESCCSCCCCCC-----CCCHHHHHHHHHHHHHHTTCT-TCEEEE
T ss_pred CEEEEECCCHHH----HHHHHHcCCCCCCEEEEcCCCCCCCCC-CcCCCCCCHHHHHHHHHHHHhhccC-CCCEEE
Confidence 457888877655 45678889 999999875432 22 110 014555555543 4 688875
No 500
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=49.87 E-value=42 Score=27.16 Aligned_cols=51 Identities=8% Similarity=-0.103 Sum_probs=37.7
Q ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCCH---HHHHHHHHHHHhhCCCCcEEEEeC
Q psy9602 178 VVELAKHAESLNVHAVLCLPELFFTPASV---EDLVDYLRDVGEAAPATPLFYYHI 230 (239)
Q Consensus 178 AIelar~A~~aGAdaVlV~PP~y~~~~s~---e~iv~yf~~VaeatpdLPIiLYN~ 230 (239)
.++.++.+.+.|+|.+.+-.+..... .- .++.+.++.++... +.|+++-++
T Consensus 33 ~~~~~~~~~~~G~~~i~l~~~~~~~~-~~~~~~~~~~~l~~~~~~~-~v~v~v~~~ 86 (227)
T 2tps_A 33 PVTVVQKALKGGATLYQFREKGGDAL-TGEARIKFAEKAQAACREA-GVPFIVNDD 86 (227)
T ss_dssp HHHHHHHHHHHTCSEEEECCCSTTCC-CHHHHHHHHHHHHHHHHHH-TCCEEEESC
T ss_pred HHHHHHHHHHCCCCEEEEecCCCCHh-HHHHHHHHHHHHHHHHHHc-CCeEEEcCH
Confidence 78889999999999999886554332 44 56677777777766 789888543
Done!