RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9614
(103 letters)
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 77
Score = 62.2 bits (151), Expect = 4e-15
Identities = 16/57 (28%), Positives = 29/57 (50%)
Query: 7 PPGSANKPRKIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
P + R R+ R +T +Q +LE+ F Y R ++A L+L+E +V++
Sbjct: 3 PAANWLHARSTRKKRCPYTKHQTLELEKEFLFNMYLTRDRRYEVARLLNLTERQVKI 59
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 68
Score = 59.0 bits (143), Expect = 6e-14
Identities = 26/46 (56%), Positives = 37/46 (80%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
+R+RT+FT Q+ LE+ F++T YPDVF RE LA+++DL EAR+QV
Sbjct: 2 QRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQV 47
>d9anta_ a.4.1.1 (A:) Antennapedia Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 56
Score = 55.9 bits (135), Expect = 8e-13
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 21 RTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R T+T YQ +LE+ F +Y R ++A L L+E ++++
Sbjct: 1 RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALSLTERQIKI 43
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 55.6 bits (134), Expect = 1e-12
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
+ + F+ Q +LE+ F+ +Y R+ LA L LSE +V+
Sbjct: 1 KGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKT 46
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 58
Score = 55.6 bits (134), Expect = 1e-12
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R+ R ++ QL +LER + ++ R +++ LSE ++ +
Sbjct: 2 RKKRIPYSKGQLRELEREYAANKFITKDKRRKISAATSLSERQITI 47
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila
melanogaster [TaxId: 7227]}
Length = 53
Score = 54.1 bits (130), Expect = 4e-12
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 19 RSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R RT F++ QL +L+R F++ +Y R+ L+S L L+EA++++
Sbjct: 1 RPRTAFSSEQLARLKREFNENRYLTERRRQQLSSELGLNEAQIKI 45
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 66
Score = 54.5 bits (131), Expect = 4e-12
Identities = 15/48 (31%), Positives = 19/48 (39%)
Query: 16 KIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
K R RT QLH L + PD +E L LS ++V
Sbjct: 2 KTTRVRTVLNEKQLHTLRTCYAANPRPDALMKEQLVEMTGLSPRVIRV 49
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 77
Score = 53.9 bits (129), Expect = 7e-12
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 9 GSANKPRKIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
S P K R+ R FT Q ++LER F + +Y RE LAS + L+ +V++
Sbjct: 1 ASDGLPNKKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKI 55
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 53.8 bits (129), Expect = 1e-11
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 7 PPGSANKPRKIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
S RT FTT QL +LE+ F +Y R ++A+ L+L+E +V++
Sbjct: 17 AKVSEPGLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKI 73
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1
(Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 53.1 bits (127), Expect = 2e-11
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R SR T+ L +E F++ QYPD RE++A+ + +
Sbjct: 1 RGSRFTWRKECLAVMESYFNENQYPDEAKREEIANACNAVIQKPGK 46
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 58
Score = 52.2 bits (125), Expect = 2e-11
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R+ RT FTT QL LER F + QY + R + +S L L+E +V++
Sbjct: 1 RKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQVKI 46
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 50
Score = 51.4 bits (123), Expect = 4e-11
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 21 RTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R FT Q L F + + P + ++ +L L + V
Sbjct: 2 RLVFTDVQRRTLHAIFKENKRPSKELQITISQQLGLELSTVSN 44
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 57
Score = 51.4 bits (123), Expect = 4e-11
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 19 RSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R RT FT QL +LE+ F K Y R +LA++L+L E+ ++V
Sbjct: 1 RYRTAFTRDQLGRLEKEFYKENYVSRPRRCELAAQLNLPESTIKV 45
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 60
Score = 51.5 bits (123), Expect = 4e-11
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
RR RT FT+ QL QLE F + +YPD+ TRE++A +L+EARV+V
Sbjct: 2 RRQRTHFTSQQLQQLEATFQRNRYPDMSTREEIAVWTNLTEARVRV 47
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 65
Score = 51.8 bits (124), Expect = 4e-11
Identities = 32/48 (66%), Positives = 42/48 (87%)
Query: 16 KIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
K RRSRTTF+ QL +LERAF++TQYPD++TRE+LA R +L+EAR+QV
Sbjct: 1 KQRRSRTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQV 48
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 58
Score = 50.7 bits (121), Expect = 9e-11
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 19 RSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
+ RTT + LER F + P +A L+L + V+V
Sbjct: 1 KRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRV 45
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 67
Score = 49.9 bits (119), Expect = 2e-10
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
RR+RTTFT+ Q+ +LE+ F + +Y DL+++L L A+V++
Sbjct: 2 RRTRTTFTSSQIAELEQHFLQGRYLTAPRLADLSAKLALGTAQVKI 47
>d1ftta_ a.4.1.1 (A:) Thyroid transcription factor 1 homeodomain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 68
Score = 48.4 bits (115), Expect = 9e-10
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
R+ R F+ Q+++LER F + +Y RE LAS + L+ +V++
Sbjct: 3 RKRRVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKI 48
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 72
Score = 48.4 bits (115), Expect = 9e-10
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 18 RRSRTTFTTYQLHQLERAFDKT-QYPDVFTREDLASRLDLSEARVQV 63
T T Q+ LE F+K ++PD T +A+ L+E + Q
Sbjct: 2 SEGAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAGLTEEQTQK 48
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 47.7 bits (113), Expect = 2e-09
Identities = 13/49 (26%), Positives = 22/49 (44%)
Query: 15 RKIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
+ +R RT+ LE F K P + +A++L L + V+V
Sbjct: 6 QARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDVVRV 54
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 53
Score = 47.2 bits (112), Expect = 2e-09
Identities = 8/43 (18%), Positives = 23/43 (53%)
Query: 21 RTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
+++ + LE+ F + Q + +E++A + ++ +V+V
Sbjct: 1 KSSISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRV 43
>d1pufb_ a.4.1.1 (B:) pbx1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 73
Score = 46.1 bits (109), Expect = 8e-09
Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 18 RRSRTTFTTYQLHQLERAFD---KTQYPDVFTREDLASRLDLSEARVQV 63
RR R F L F YP +E+LA + ++ ++V
Sbjct: 2 RRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSN 50
>d1x2na1 a.4.1.1 (A:6-67) Homeobox protein pknox1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 62
Score = 45.9 bits (109), Expect = 8e-09
Identities = 6/49 (12%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQ---YPDVFTREDLASRLDLSEARVQV 63
+ R + + + + YP ++ +A++ +L+ +V
Sbjct: 3 KNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTNLTLLQVNN 51
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1)
{Rat (Rattus rattus) [TaxId: 10117]}
Length = 78
Score = 45.5 bits (107), Expect = 2e-08
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Query: 21 RTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQVNSDSQIPTLGSNE---- 76
R + L +A+++ + P RE L + +E + S SQ LGSN
Sbjct: 1 RFKWGPASQQILFQAYERQKNPSKEERETLVEECNRAECIQRGVSPSQAQGLGSNLVTEV 60
Query: 77 KVQI 80
+V
Sbjct: 61 RVYN 64
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 45.4 bits (107), Expect = 2e-08
Identities = 9/61 (14%), Positives = 21/61 (34%), Gaps = 4/61 (6%)
Query: 7 PPGSANKPRKIRRSRTTFTTYQLHQLERAFDK----TQYPDVFTREDLASRLDLSEARVQ 62
++ +R RT FT Q ++ ++ Q D E + + ++
Sbjct: 7 GSNPSSSGGTTKRFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETGVRRQVLK 66
Query: 63 V 63
+
Sbjct: 67 I 67
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 57
Score = 43.8 bits (103), Expect = 4e-08
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 21 RTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
RT+ T LE++F + Q P +A +L++ + ++V
Sbjct: 2 RTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRV 44
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5,
LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 42.1 bits (99), Expect = 2e-07
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 19 RSRTTFTTYQLHQLERAFDK-TQYPDVFTREDLASRLDLSEARVQV 63
+ LE+ F T+YPD + L+ +LD S ++Q
Sbjct: 3 KDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKIQC 48
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 42.4 bits (99), Expect = 2e-07
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 18 RRSRTTFTTYQLHQLERAFDKT-QYPDVFTREDLASRLDLSEARVQV 63
RSRT + L L+ YPD L+++LDL + +
Sbjct: 8 PRSRTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLDLPKHTIIK 54
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6,
LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 41.2 bits (97), Expect = 4e-07
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 25 TTYQLHQLERAFDK-TQYPDVFTREDLASRLDLSEARVQV 63
T LE+ F T++PD E L+ +LD +Q
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLDWDVRSIQR 40
>d1k61a_ a.4.1.1 (A:) mat alpha2 Homeodomain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 60
Score = 41.3 bits (97), Expect = 4e-07
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 5/49 (10%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQ---YPDVFTREDLASRLDLSEARVQV 63
R R FT + LE F K Y D E+L LS +++
Sbjct: 1 RGHR--FTKENVRILESWFAKNIENPYLDTKGLENLMKNTSLSRIQIKN 47
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1,
ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 37.0 bits (85), Expect = 3e-05
Identities = 8/50 (16%), Positives = 16/50 (32%)
Query: 14 PRKIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
P + T QL L+ +F + L ++ L+ +
Sbjct: 1 PDFTPQKFKEKTAEQLRVLQASFLNSSVLTDEELNRLRAQTKLTRREIDA 50
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez
{Human (Homo sapiens) [TaxId: 9606]}
Length = 76
Score = 33.6 bits (76), Expect = 6e-04
Identities = 9/46 (19%), Positives = 14/46 (30%)
Query: 18 RRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQV 63
S T QL L+ F + Q+ + L L +
Sbjct: 4 GSSGKRKTKEQLAILKSFFLQCQWARREDYQKLEQITGLPRPEIIQ 49
>d1xfka_ c.42.1.1 (A:) Formimidoylglutamase HutG {Vibrio cholerae
[TaxId: 666]}
Length = 324
Score = 25.2 bits (54), Expect = 1.6
Identities = 8/67 (11%), Positives = 18/67 (26%), Gaps = 6/67 (8%)
Query: 8 PGSANKPRKIRRSRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQVNSDS 67
G+ + P I+++ + + + D +L +Q
Sbjct: 54 TGAKHAPSLIKQALANLAWHHPIPIYDLGNIRCEGD-----ELEQAQQECAQVIQQALPH 108
Query: 68 QIP-TLG 73
LG
Sbjct: 109 ARAIVLG 115
>d1ynha1 d.126.1.7 (A:3-441) Succinylarginine dihydrolase
{Escherichia coli [TaxId: 562]}
Length = 439
Score = 24.7 bits (54), Expect = 2.9
Identities = 16/55 (29%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 20 SRTTFTTYQLHQLERAFDKTQYPDVFTREDLASRLDLSEARVQVNSDSQIPTLGS 74
+ L D+ Y D T DLA L E R ++ SQ+ LGS
Sbjct: 380 PAVMMNDTLFNALNDWVDR-YYRDRLTAADLADPQLLREGREALDVLSQLLNLGS 433
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein
(CAP), C-terminal domain {Escherichia coli [TaxId:
562]}
Length = 69
Score = 23.2 bits (50), Expect = 3.6
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Query: 29 LHQLERAFDKTQYPDVF----TREDLASRLDLSEARVQVN 64
L L + D +PD TR+++ + S R V
Sbjct: 10 LLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS--RETVG 47
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli
[TaxId: 562]}
Length = 206
Score = 24.2 bits (51), Expect = 3.8
Identities = 6/19 (31%), Positives = 13/19 (68%)
Query: 46 TREDLASRLDLSEARVQVN 64
TR+D+ L L++ +Q++
Sbjct: 188 TRQDIVRLLGLNDPLIQIS 206
>d1z6ma1 c.47.1.13 (A:1-172) Hypothetical protein EF0770
{Enterococcus faecalis [TaxId: 1351]}
Length = 172
Score = 23.4 bits (49), Expect = 6.0
Identities = 7/36 (19%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 54 LDLSEARV-QVNSDSQIPTLGS-NEKVQIVVTSDFT 87
+D+S +VN+++ + +G N V+++ +
Sbjct: 1 MDISVIDATKVNTETGL-HIGESNAPVKMIEFINVR 35
>d1ac5a_ c.69.1.5 (A:) Serine carboxypeptidase II {Baker's yeast
(Saccharomyces cerevisiae), kex1(delta)p [TaxId: 4932]}
Length = 483
Score = 23.6 bits (50), Expect = 6.2
Identities = 5/18 (27%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
Query: 1 MFFYFFP----PGSANKP 14
FF+ F G+ ++P
Sbjct: 51 YFFWKFTNNDSNGNVDRP 68
>d1uzva_ b.115.1.1 (A:) Fucose-binding lectin II (PA-LII)
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 114
Score = 22.5 bits (48), Expect = 9.4
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 39 TQYPDVFTREDLASRLDLSEARVQVNSDSQIPTLGSNEKVQIVVTSD 85
TQ +V + A+ +Q+ GS+ KVQ+ V+ +
Sbjct: 25 TQTVNVLVNNETAATFSGQSTN-NAVIGTQVLNSGSSGKVQVQVSVN 70
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.129 0.363
Gapped
Lambda K H
0.267 0.0654 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 337,606
Number of extensions: 12083
Number of successful extensions: 82
Number of sequences better than 10.0: 1
Number of HSP's gapped: 75
Number of HSP's successfully gapped: 46
Length of query: 103
Length of database: 2,407,596
Length adjustment: 64
Effective length of query: 39
Effective length of database: 1,528,876
Effective search space: 59626164
Effective search space used: 59626164
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.0 bits)