RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9618
(542 letters)
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter sphaeroides
[TaxId: 1063]}
Length = 288
Score = 198 bits (504), Expect = 5e-60
Identities = 35/231 (15%), Positives = 76/231 (32%), Gaps = 22/231 (9%)
Query: 41 VEPFVIGICGGSASGKTTVATKIIESLNV--PWVTLLSMDSFYRV------LNEEQHKKA 92
+ +I + G S +G +TV + + D+F+R ++ A
Sbjct: 2 KKHPIISVTGSSGAGTSTVKHTFDQIFRREGVKAVSIEGDAFHRFNRADMKAELDRRYAA 61
Query: 93 AQNEYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHS----------RETRTKPM 142
++ +A + + L + E + Y
Sbjct: 62 GDATFSHFSYEANELKELERVFREYGETGQGRTRTYVHDDAEAARTGVAPGNFTDWRDFD 121
Query: 143 YGANVIIFEGILAFHNPQ---VLELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIK 199
++++ +EG+ + L D+K+ V ++ +++ RD RG E V
Sbjct: 122 SDSHLLFYEGLHGAVVNSEVNIAGLADLKIGVVPVINLEWIQKIHRDRATRGYTTEAVTD 181
Query: 200 QYVNMVKPAFSTFIAPSMVHADIIVPRGGENCVAIDLIVQHIHSQLQAVLL 250
+ A+ I P DI R + I + I + ++V++
Sbjct: 182 VILR-RMHAYVHCIVPQFSQTDINFQRVPVVDTSNPFIARWIPTADESVVV 231
Score = 28.8 bits (64), Expect = 1.6
Identities = 3/49 (6%), Positives = 9/49 (18%), Gaps = 10/49 (20%)
Query: 308 SVDVPIYNFVTHS----------RETRTKPMYGANVIIFEGILAFHNPQ 346
Y ++++ +EG+
Sbjct: 91 QGRTRTYVHDDAEAARTGVAPGNFTDWRDFDSDSHLLFYEGLHGAVVNS 139
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 184 bits (467), Expect = 9e-56
Identities = 115/211 (54%), Positives = 154/211 (72%), Gaps = 7/211 (3%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESLNV-------PWVTLLSMDSFYRVLNEEQHKKAAQ 94
EPF+IG+ GG+ASGK++V KI++ L V +LS DSFYRVL EQ KA +
Sbjct: 1 EPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALK 60
Query: 95 NEYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGIL 154
++NFDHPDAFD EL+L TL+ + EGK V +P+Y+FV+HSR+ T +Y A+V++FEGIL
Sbjct: 61 GQFNFDHPDAFDNELILKTLKEITEGKTVQIPVYDFVSHSRKEETVTVYPADVVLFEGIL 120
Query: 155 AFHNPQVLELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIA 214
AF++ +V +L MK+FVDTDAD RL+RR+ RDI RGRDLE ++ QY+ VKPAF F
Sbjct: 121 AFYSQEVRDLFQMKLFVDTDADTRLSRRVLRDISERGRDLEQILSQYITFVKPAFEEFCL 180
Query: 215 PSMVHADIIVPRGGENCVAIDLIVQHIHSQL 245
P+ +AD+I+PRG +N VAI+LIVQHI L
Sbjct: 181 PTKKYADVIIPRGADNLVAINLIVQHIQDIL 211
Score = 30.7 bits (68), Expect = 0.34
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 310 DVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQV 347
+P+Y+FV+HSR+ T +Y A+V++FEGILAF++ +V
Sbjct: 90 QIPVYDFVSHSRKEETVTVYPADVVLFEGILAFYSQEV 127
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 143 bits (362), Expect = 2e-39
Identities = 42/226 (18%), Positives = 78/226 (34%), Gaps = 38/226 (16%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESLN----VPWVTLLSMDSFYRVLNEEQHKKAAQNEY 97
P++I I G A GK+T A + L+ V L++ D F Q K
Sbjct: 79 IPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLH---PNQVLKERGLMK 135
Query: 98 NFDHPDAFDFELLLPTLQRLKEGK-KVDVPIYNFVTHSR-ETRTKPMYGANVIIFEGILA 155
P+++D L+ + LK G V P+Y+ + + K + +++I EG+
Sbjct: 136 KKGFPESYDMHRLVKFVSDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNV 195
Query: 156 FHNPQVL----------ELLDMKVFVDTDADVRLARRLKRDILARG---RDLEGVIKQYV 202
+ + +D ++VD D+ + R + R D + Y
Sbjct: 196 LQSGMDYPHDPHHVFVSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYA 255
Query: 203 NM----------------VKPAFSTFIAPSMVHADIIVPRGGENCV 232
+ I P+ A +I+ + + V
Sbjct: 256 KLTKEEAIKTAMTLWKEINWLNLKQNILPTRERASLILTKSANHAV 301
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 107 bits (267), Expect = 2e-27
Identities = 35/183 (19%), Positives = 78/183 (42%), Gaps = 8/183 (4%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHP 102
V+GI G S SGKTT+A ++ ++L +++ ++ + E+ +
Sbjct: 22 RLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWFEYYY 81
Query: 103 DAF-DFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQV 161
+ L ++LK ++ +P Y+ T + RT + +++I+ EG+ +
Sbjct: 82 LQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGV-FLQRKEW 140
Query: 162 LELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSMVHAD 221
D V++D ++R AR + ++++ I +Y + + P AD
Sbjct: 141 RPFFDFVVYLDCPREIRFARENDQ----VKQNIQKFINRYWK-AEDYYLETEEPIK-RAD 194
Query: 222 IIV 224
++
Sbjct: 195 VVF 197
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 81.8 bits (201), Expect = 8e-18
Identities = 35/194 (18%), Positives = 63/194 (32%), Gaps = 22/194 (11%)
Query: 31 PPWYNKAGEQVEPFVIGICGGSASGKTTVATKIIESL-----NVPWVTLLSMDSFYRVLN 85
P W+ + P I G SGK+ + +I L + S+D FY
Sbjct: 17 PEWFETGNKC--PLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLTHE 74
Query: 86 EE----QHKKAAQNEYNFDHPDAFDFELLLPTLQRLK------EGKKVDVPIYNFVTHSR 135
++ + K + P D +LL L + + V +P Y+
Sbjct: 75 DQLKLNEQFKNNKLLQGRGLPGTHDMKLLQEVLNTIFNNNEHPDQDTVVLPKYDKSQFKG 134
Query: 136 ETRTKP-----MYGANVIIFEGILAFHNPQVLELLDMKVFVDTDADVRLARRLKRDILAR 190
E P ++ I EG NP + + + + DV D+L R
Sbjct: 135 EGDRCPTGQKIKLPVDIFILEGWFLGFNPILQGIENNDLLTGDMVDVNAKLFFYSDLLWR 194
Query: 191 GRDLEGVIKQYVNM 204
+++ + +
Sbjct: 195 NPEIKSLGIVFTTD 208
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus
[TaxId: 274]}
Length = 208
Score = 75.4 bits (185), Expect = 3e-16
Identities = 17/52 (32%), Positives = 35/52 (67%)
Query: 461 LSLLPFKVSIHSIAYAFPNVKIVTSAVDPEINENFYVIPGIGNFGDRYFGTE 512
+++L + IA P+ ++V +A+D +N++ Y++PG+G+ GDR +GT+
Sbjct: 157 MAILAAPEGLERIAKDHPDTEVVVAAIDERLNDHGYIVPGLGDAGDRIYGTK 208
Score = 49.6 bits (118), Expect = 2e-07
Identities = 9/46 (19%), Positives = 21/46 (45%)
Query: 422 LPETPQIKGLHTFIRNKDTSRDEFIFYSKRLIRLVIEFALSLLPFK 467
L + P ++ +R+K T +F ++ + L+ A+ L +
Sbjct: 5 LVDHPLVQHKLAHLRDKRTGPKDFRELAEEVAMLMAYEAMRDLELE 50
Score = 28.0 bits (62), Expect = 2.6
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 262 MMAIRILLDHDVLLMDATVATGAAAMMAIRILLDH 296
+ + + L+D +ATG +A +A+ +L +
Sbjct: 115 IKLPPDIAERRAFLLDPMLATGGSASLALSLLKER 149
>d1xtta1 c.61.1.1 (A:2-216) Uracil PRTase, Upp {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 215
Score = 75.4 bits (185), Expect = 3e-16
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 461 LSLLPFKVSIHSIAYAFPNVKIVTSAVDPEINENFYVIPGIGNFGDRYFG 510
+S++ + ++ I +P + + T A+DPE+N Y++PG+G+ GDR FG
Sbjct: 166 VSIISSEYGVNKILSKYPFIYLFTVAIDPELNNKGYILPGLGDAGDRAFG 215
Score = 50.0 bits (119), Expect = 2e-07
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 426 PQIKGLHTFIRNKDTSRDEFIFYSKRLIRLVIEFALSLLPFK 467
P + T +R+K T + F RL R++ + L ++
Sbjct: 8 PITLHILTQLRDKYTDQINFRKNLVRLGRILGYEISNTLDYE 49
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus
[TaxId: 1394]}
Length = 208
Score = 75.0 bits (184), Expect = 4e-16
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 460 ALSLLPFKVSIHSIAYAFPNVKIVTSAVDPEINENFYVIPGIGNFGDRYFGTE 512
+ L+ + ++ A P+V I +A+D +N++ Y++PG+G+ GDR FGT+
Sbjct: 156 FMCLIAAPEGVKAVETAHPDVDIYIAALDERLNDHGYIVPGLGDAGDRLFGTK 208
Score = 48.4 bits (115), Expect = 4e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 426 PQIKGLHTFIRNKDTSRDEFIFYSKRLIRLVIEFALSLLPFK 467
P I+ T+IR+K+T EF + L+ LP +
Sbjct: 9 PLIQHKLTYIRDKNTGTKEFRELVDEVATLMAFEITRDLPLE 50
Score = 29.1 bits (65), Expect = 1.1
Identities = 9/36 (25%), Positives = 17/36 (47%)
Query: 265 IRILLDHDVLLMDATVATGAAAMMAIRILLDHDVPE 300
+ + D +++D +ATG +A+ AI L
Sbjct: 118 PSDVEERDFIIVDPMLATGGSAVAAIDALKKRGAKS 153
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId:
5811]}
Length = 224
Score = 75.0 bits (184), Expect = 5e-16
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 461 LSLLPFKVSIHSIAYAFPNVKIVTSAVDPEINENFYVIPGIGNFGDRYFGT 511
+++L I + +P V++VT+AVD +N +Y++PGIG+FGDRYFGT
Sbjct: 173 VNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT 223
Score = 61.9 bits (150), Expect = 1e-11
Identities = 24/47 (51%), Positives = 38/47 (80%)
Query: 421 LLPETPQIKGLHTFIRNKDTSRDEFIFYSKRLIRLVIEFALSLLPFK 467
L+ +T Q++ + T IR+K+T ++EF+FY+ RLIRL+IE AL+ LPF+
Sbjct: 18 LMKQTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQ 64
Score = 37.2 bits (86), Expect = 0.003
Identities = 28/164 (17%), Positives = 59/164 (35%), Gaps = 12/164 (7%)
Query: 146 NVIIFEGILAFHNPQVLELLDMKVFVDTDAD--VRLARRLKRDILARGRDLEGVIKQYVN 203
NV++ + Q+ ++ + +T + V A RL R ++ + K+ V
Sbjct: 15 NVVLMK-----QTAQLRAMMTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVT 69
Query: 204 MVKPAFSTFIAPSMVHADIIVPRGGENCVAIDLIVQHIHSQLQAVLLMDATVATGAAAMM 263
++ + + R GE+ + +L+ T ++
Sbjct: 70 TPLDVSYHGVSFYSKICGVSIVRAGESME--SGLRAVCRGVRIGKILIQRDETTAEPKLI 127
Query: 264 AIRI---LLDHDVLLMDATVATGAAAMMAIRILLDHDVPEGYIR 304
++ + + V+L+D AT + AI +LL V E I
Sbjct: 128 YEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERII 171
Score = 29.9 bits (67), Expect = 0.62
Identities = 15/83 (18%), Positives = 26/83 (31%), Gaps = 1/83 (1%)
Query: 215 PSMVHADIIVPRGGENCVA-IDLIVQHIHSQLQAVLLMDATVATGAAAMMAIRILLDHDV 273
+ I++ R + + + V+L+D AT + AI +LL V
Sbjct: 106 RGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGV 165
Query: 274 LLMDATVATGAAAMMAIRILLDH 296
AA I +
Sbjct: 166 KEERIIFVNILAAPQGIERVFKE 188
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima
[TaxId: 2336]}
Length = 210
Score = 72.7 bits (178), Expect = 2e-15
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 469 SIHSIAYAFPNVKIVTSAVDPEINENFYVIPGIGNFGDRYFGTE 512
+ ++ + +VKI +A+D +N++ Y+IPG+G+ GDR F T+
Sbjct: 167 GVEAVEKKYEDVKIYVAALDERLNDHGYIIPGLGDAGDRLFRTK 210
Score = 47.7 bits (113), Expect = 7e-07
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 426 PQIKGLHTFIRNKDTSRDEFIFYSKRLIRLVIEFALSLLPFK 467
P IK T +R+K+T EF + + L+ A L +
Sbjct: 11 PLIKHKLTIMRDKNTGPKEFRELLREITLLLAYEATRHLKCE 52
Score = 27.3 bits (60), Expect = 4.7
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Query: 215 PSMVHADIIVPRGGENCVAIDLIVQHIHSQLQAV-LLMDATVATGAAAMMAIRILLDH 271
P+ I + R E A++ + L+D +ATG +++ AI IL ++
Sbjct: 94 PNASVGHIGIYRDPETLQAVEYYAKLPPLNDDKEVFLLDPMLATGVSSIKAIEILKEN 151
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 64.7 bits (156), Expect = 1e-12
Identities = 29/195 (14%), Positives = 58/195 (29%), Gaps = 11/195 (5%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQN 95
K E +PF + I G SGKTT + N + ++ + V + ++
Sbjct: 2 KYAEGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMYKD 61
Query: 96 EYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRT-----KPMYGANVIIF 150
+ P L + KK+ + + + +
Sbjct: 62 PKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTL 121
Query: 151 EGILAFHNPQVLELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVI-KQYVNMVKPAF 209
E F + D+ +++ T +V R I R R E + +Y+ +
Sbjct: 122 EEWYKFIEESIHVQADLIIYLRTSPEVAYER-----IRQRARSEESCVPLKYLQELHELH 176
Query: 210 STFIAPSMVHADIIV 224
++ V
Sbjct: 177 EDWLIHQRRPQSCKV 191
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 59.1 bits (142), Expect = 9e-11
Identities = 42/213 (19%), Positives = 69/213 (32%), Gaps = 23/213 (10%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYR-VLNEEQHKKAAQNEYNFDH 101
+++G+ GG SGKTT+A + L VP V D R V+ ++ + E+
Sbjct: 2 TYIVGLTGGIGSGKTTIA-NLFTDLGVPLV---DADVVAREVVAKDSPLLSKIVEHFGAQ 57
Query: 102 PDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRET----RTKPMYGANVIIFEGILAFH 157
EL L+ D N + H + A +F L
Sbjct: 58 ILTEQGELNRAALRERVFNHDEDKLWLNNLLHPAIRERMKQKLAEQTAPYTLFVVPLLIE 117
Query: 158 NPQVLELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSM 217
N L D + VD +LAR +RD + + Q + +
Sbjct: 118 NKLT-ALCDRILVVDVSPQTQLARSAQRDNNNFEQIQRIMNSQVSQQER----------L 166
Query: 218 VHADIIVPRGGENCVAIDLI---VQHIHSQLQA 247
AD ++ E + + V +H
Sbjct: 167 KWADDVINNDAELAQNLPHLQQKVLELHQFYLQ 199
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 58.0 bits (139), Expect = 2e-10
Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 5/172 (2%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDH 101
P +IGI G SGK+TVA ++ S P + +D+ E + ++ +
Sbjct: 2 HPIIIGITGNIGSGKSTVA-ALLRSWGYPVL---DLDALAARARENKEEELKRLFPEAVV 57
Query: 102 PDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQV 161
D L + E K + + A ++ E L
Sbjct: 58 GGRLDRRALARLVFSDPERLKALEAVVHPEVRRLLMEELSRLEAPLVFLEIPL-LFEKGW 116
Query: 162 LELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFI 213
L + V + R+ R + R L+R L Q K +T++
Sbjct: 117 EGRLHGTLLVAAPLEERVRRVMARSGLSREEVLARERAQMPEEEKRKRATWV 168
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 57.5 bits (138), Expect = 4e-10
Identities = 28/175 (16%), Positives = 58/175 (33%), Gaps = 8/175 (4%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKK----AAQNEYN 98
+++ + GG SGK+TVA L + + D R + E A N
Sbjct: 3 RYIVALTGGIGSGKSTVA-NAFADLGINVI---DADIIARQVVEPGAPALHAIADHFGAN 58
Query: 99 FDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHN 158
D L +K + +ET+ + + + +
Sbjct: 59 MIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQATSPYVLWVVPLLVE 118
Query: 159 PQVLELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFI 213
+ + + + VD + +L R ++RD + R + + Q + A + +
Sbjct: 119 NSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQATREARLAVADDV 173
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 52.3 bits (124), Expect = 2e-08
Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 16/200 (8%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPW--VTLLSMDSFYR-VLNEEQHKKAAQNEYNFDH 101
V+ + G G TT + +++L ++S S V EE D
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFEVAKEENLVSDRDQMRKMDP 62
Query: 102 PDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQV 161
+ + +++ E K + THS + K L V
Sbjct: 63 ETQKRIQKMA--GRKIAEMAKESPVAVD--THSTVSTPKGYLPGLPSWVLNELNPDLIIV 118
Query: 162 LELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSMVHAD 221
+ +T D L RR+ + R D I+Q+ M + A ++ +
Sbjct: 119 V---------ETTGDEILMRRMSDETRVRDLDTASTIEQHQFMNRCAAMSYGVLTGATVK 169
Query: 222 IIVPRGGENCVAIDLIVQHI 241
I+ R G A++ + +
Sbjct: 170 IVQNRNGLLDQAVEELTNVL 189
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 45.7 bits (107), Expect = 5e-06
Identities = 22/172 (12%), Positives = 40/172 (23%), Gaps = 29/172 (16%)
Query: 44 FVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNF-DHP 102
+I + G SGK T A I+ + + L L AA +Y
Sbjct: 2 KLIFLSGVKRSGKDTTADFIMSNYSAVKYQL--AGPIKDALAYAWGVFAANTDYPCLTRK 59
Query: 103 DAFDFELLLPTLQRLKEGKKV-----DVPIYNFVTHSR----------ETRTKPMYGANV 147
+ + T L + + + N + + E+ +
Sbjct: 60 EFEGIDYDRETNLNLTKLEVITIMEQAFCYLNGKSPIKGVFVFDDEGKESVNFVAFNKIT 119
Query: 148 IIFEGILAFHNPQVL-----------ELLDMKVFVDTDADVRLARRLKRDIL 188
+ I + + L M D D
Sbjct: 120 DVINNIEDQWSVRRLMQALGTDLIVNNFDRMYWVKLFALDYLDKFNSGYDYY 171
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 42.8 bits (99), Expect = 2e-05
Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 1/92 (1%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDA 104
+I G SGK+T A + I + + D ++ E+ + +
Sbjct: 4 IILTIGCPGSGKSTWAREFIAKNP-GFYNINRDDYRQSIMAHEERDEYKYTKKKEGIVTG 62
Query: 105 FDFELLLPTLQRLKEGKKVDVPIYNFVTHSRE 136
F+ L K V + N R
Sbjct: 63 MQFDTAKSILYGGDSVKGVIISDTNLNPERRL 94
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 41.9 bits (97), Expect = 7e-05
Identities = 18/128 (14%), Positives = 34/128 (26%), Gaps = 7/128 (5%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLN--VPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFD 100
P +I + G A GKT ++ K+ LN ++ + R + + N +
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVGQYRRDMVKTYKSFEFFLPDNEE 61
Query: 101 HPDA-----FDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILA 155
+ + G N R F
Sbjct: 62 GLKIRKQCALAALNDVRKFLSEEGGHVAVFDATNTTRERRAMIFNFGEQNGYKTFFVESI 121
Query: 156 FHNPQVLE 163
+P+V+
Sbjct: 122 CVDPEVIA 129
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 40.0 bits (92), Expect = 2e-04
Identities = 23/156 (14%), Positives = 43/156 (27%), Gaps = 15/156 (9%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDA 104
+I + GGS++GK+ + + L PW+ +DS +
Sbjct: 5 MIILNGGSSAGKSGIVRCLQSVLPEPWL-AFGVDSLIE-----------AMPLKMQSAEG 52
Query: 105 FDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQVLEL 164
+ E + ++ V + + + V +L
Sbjct: 53 GIEFDADGGVSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDL 112
Query: 165 LDMKVFVDTDADV---RLARRLKRDILARGRDLEGV 197
+ V V D V R R R + V
Sbjct: 113 DVLWVGVRCDGAVAEGRETARGDRVAGMAAKQAYVV 148
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 40.0 bits (92), Expect = 3e-04
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 7/107 (6%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHP 102
I I G ++SGK+TVA I + L + YR A +N+ +
Sbjct: 3 TIQIAIDGPASSGKSTVAKIIAKDFGFT---YLDTGAMYRAA----TYMALKNQLGVEEV 55
Query: 103 DAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVII 149
+A L + + + V + R + I
Sbjct: 56 EALLALLDQHPISFGRSETGDQLVFVGDVDITHPIRENEVTNHVSAI 102
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 38.4 bits (88), Expect = 7e-04
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNE 86
++ + G SGK+T+A + VP V D + +
Sbjct: 6 ILLLSGHPGSGKSTIAEALANLPGVPKV-HFHSDDLWGYIKH 46
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 37.6 bits (86), Expect = 0.001
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Query: 39 EQVEPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYN 98
E+ +P V+ + GG SGK T I+ + S R + K
Sbjct: 2 EKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHL---SAGDLLRQEQQSGSKDGEMIATM 58
Query: 99 FDH 101
+
Sbjct: 59 IKN 61
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 37.3 bits (85), Expect = 0.002
Identities = 11/94 (11%), Positives = 26/94 (27%), Gaps = 6/94 (6%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDA 104
+ I G + GK+T ++ L+ + D ++ + +
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQLDNSAY--IEGDIINHMVVGGYRP----PWESDELLAL 57
Query: 105 FDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETR 138
+ T+ L V + F +
Sbjct: 58 TWKNITDLTVNFLLAQNDVVLDYIAFPDEAEALA 91
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 37.2 bits (85), Expect = 0.002
Identities = 12/51 (23%), Positives = 19/51 (37%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKA 92
+P + I G ASGK T I + ++ + E K+A
Sbjct: 2 DPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRA 52
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 208
Score = 37.1 bits (85), Expect = 0.002
Identities = 41/209 (19%), Positives = 78/209 (37%), Gaps = 35/209 (16%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESLNVPW---VTLLSMDSFYRVLNEEQHKKAAQNEYN 98
I + G SASGK+T+A ++ L L D+ LN +
Sbjct: 23 RGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLN---------KDLG 73
Query: 99 FDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETR--TKPMYGANVIIFEGILAF 156
F D + + + +L I +F++ R+ R + ++ E L F
Sbjct: 74 FSEADRNENIRRIAEVAKLFADSNSI-AITSFISPYRKDRDTARQLHEVATPGEETGLPF 132
Query: 157 HNPQVLELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPS 216
++V+VD +V R K + EGVIK++ + P + AP+
Sbjct: 133 ----------VEVYVDVPVEVAEQRDPKGL---YKKAREGVIKEFTGISAP----YEAPA 175
Query: 217 MVHADIIVPRGGENC-VAIDLIVQHIHSQ 244
+ ++ V A+ I+ ++ ++
Sbjct: 176 --NPEVHVKNYELPVQDAVKQIIDYLDTK 202
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 37.3 bits (85), Expect = 0.003
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDH 101
VI I G S +GK T+ + E+L LL + YRVL
Sbjct: 5 VITIDGPSGAGKGTLCKAMAEALQWH---LLDSGAIYRVLALAALHHHVDVASEDAL 58
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 36.8 bits (84), Expect = 0.003
Identities = 12/91 (13%), Positives = 25/91 (27%), Gaps = 2/91 (2%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDH 101
P V+ G +GK+T + + S V ++ + A +
Sbjct: 13 NPEVVVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTL--GSWQRCVSSCQAALRQGKRVVI 70
Query: 102 PDAFDFELLLPTLQRLKEGKKVDVPIYNFVT 132
+ + + V +NF
Sbjct: 71 DNTNPDVPSRARYIQCAKDAGVPCRCFNFCA 101
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 35.5 bits (80), Expect = 0.006
Identities = 28/201 (13%), Positives = 58/201 (28%), Gaps = 36/201 (17%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDAF 105
I + G +GK+T+ ++ + LN+ + + D F
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEI---------------EKRTGADVGWVF 49
Query: 106 DFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQVLELL 165
D E R ++ V + K N + G++ + + +
Sbjct: 50 DLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQ- 108
Query: 166 DMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSMVHADIIVP 225
R R KR +L V++ N P + AD+ +
Sbjct: 109 ----------LARTQRDKKRPLLHVETPPREVLEALANERNPLYEEI-------ADVTIR 151
Query: 226 RGGENCVAIDLIVQHIHSQLQ 246
++ ++ I L+
Sbjct: 152 TDDQS---AKVVANQIIHMLE 169
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 36.5 bits (84), Expect = 0.007
Identities = 21/199 (10%), Positives = 44/199 (22%), Gaps = 36/199 (18%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPWVTLLS--------------MDSFYR-------- 82
+ I G GKTT ++ + + + + + Y
Sbjct: 6 RVYIDGPHGMGKTTTTQLLVALGSRDDIVYVPEPMTYWRVLGASETIANIYTTQHRLDQG 65
Query: 83 -VLNEEQHKKAAQNEYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKP 141
+ + + P A +L P + P + R
Sbjct: 66 EISAGDAAVVMTSAQITMGMPYAVTDAVLAPHIGGEAGSSHAPPPALTLIF-DRHPIAAL 124
Query: 142 MYGANVIIFEGILAFHNPQVLELL-------DMKVFVDTDADVRLARRLKRDILARGRDL 194
+ G + L V D + R + R R
Sbjct: 125 LCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVLGALPEDRHIDR-----LAKRQRPG 179
Query: 195 EGVIKQYVNMVKPAFSTFI 213
E + + ++ +
Sbjct: 180 ERLDLAMLAAIRRVYGLLA 198
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 35.8 bits (82), Expect = 0.010
Identities = 27/207 (13%), Positives = 52/207 (25%), Gaps = 38/207 (18%)
Query: 40 QVEPFVIGICGGSASGKTTVATKIIESLNVP-------------WVTLLS---MDSFYRV 83
++ I + G GKTT A + + + W L + Y
Sbjct: 2 KMGVLRIYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGT 61
Query: 84 L-----NEEQHKKAAQNEYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYN--------- 129
+ + A + +F ++ + L + D+ N
Sbjct: 62 QTRRLNGDVSPEDAQRLTAHFQSLFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIMLS 121
Query: 130 --FVTHSRETRTKPMYGANVIIFEGILAFHNPQVLEL-LDMKVFVDTDADVRLARRLKRD 186
S Y + + E V L+R
Sbjct: 122 DRHPIASTICFPLSRYLVGDMSPAALPGLLFTLPAEPPGTNLVVCTVSLPSHLSR----- 176
Query: 187 ILARGRDLEGVIKQYVNMVKPAFSTFI 213
+ R R E V +V +++ + I
Sbjct: 177 VSKRARPGETVNLPFVMVLRNVYIMLI 203
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 34.5 bits (78), Expect = 0.013
Identities = 9/63 (14%), Positives = 15/63 (23%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDAF 105
I + G G TTV ++ +L +V + A
Sbjct: 5 IFMVGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTVADVVAAEGWPGFRRRESEA 64
Query: 106 DFE 108
Sbjct: 65 LQA 67
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 34.9 bits (79), Expect = 0.013
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWV 72
P V+ + GG +GK T +I+E +
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKYGYTHL 30
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 34.2 bits (77), Expect = 0.018
Identities = 30/211 (14%), Positives = 61/211 (28%), Gaps = 39/211 (18%)
Query: 39 EQVEPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYN 98
EQ + I I G +GKT++A I L+ + + + + EY+
Sbjct: 1 EQPKGINILITGTPGTGKTSMAEMIAAELDGF---------QHLEVGKLVKENHFYTEYD 51
Query: 99 FDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHN 158
+ E L L + + V N V H+
Sbjct: 52 TELDTHIIEEKDEDRL--LDFMEPIMVSRGNHVVDY----------------------HS 87
Query: 159 PQVLELLDMKVFVDTDADVR-LARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSM 217
++ + V L RL + + + + + A
Sbjct: 88 SELFPERWFHMVVVLHTSTEVLFERLTKRQYSEAK-----RAENMEAEIQCICEEEARDA 142
Query: 218 VHADIIVPRGGENCVAIDLIVQHIHSQLQAV 248
DI++ R + + V+ I +++ +
Sbjct: 143 YEDDIVLVRENDTLEQMAATVEEIRERVEVL 173
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 34.2 bits (77), Expect = 0.018
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 45 VIGICGGSASGKTTVATKIIESLN 68
++ S +GKTT+ K+I +L
Sbjct: 4 LLAFAAWSGTGKTTLLKKLIPALC 27
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 34.3 bits (77), Expect = 0.019
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWV 72
+ I GG +SGK+ + K+ N
Sbjct: 10 VAILGGESSGKSVLVNKLAAVFNTTSA 36
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 34.2 bits (77), Expect = 0.019
Identities = 10/60 (16%), Positives = 24/60 (40%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDH 101
+ VI + GG +GK T K+++ + ++ + + Q+ + +N
Sbjct: 7 QVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQ 66
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 34.1 bits (77), Expect = 0.020
Identities = 6/29 (20%), Positives = 14/29 (48%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTL 74
I + G GKTT+ ++ + ++ +
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLKYINV 35
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 34.6 bits (78), Expect = 0.023
Identities = 22/151 (14%), Positives = 42/151 (27%), Gaps = 1/151 (0%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHP 102
P + G SGKT++ + I E + + D+F + + H
Sbjct: 32 PTAFLLGGQPGSGKTSLRSAIFEETQGNVIV-IDNDTFKQQHPNFDELVKLYEKDVVKHV 90
Query: 103 DAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQVL 162
+ + + RL + V T +T M A + +
Sbjct: 91 TPYSNRMTEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINS 150
Query: 163 ELLDMKVFVDTDADVRLARRLKRDILARGRD 193
L ++ + AD + R
Sbjct: 151 YLGTIERYETMYADDPMTARATPKQAHDIVV 181
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 33.3 bits (75), Expect = 0.030
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 45 VIGICGGSASGKTTVATKIIESL 67
V + G SGKTT+ K + +
Sbjct: 3 VWQVVGYKHSGKTTLMEKWVAAA 25
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 33.7 bits (76), Expect = 0.031
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDAF 105
+ + G +GK T A K+ E L +P + S +R EE K + + D D
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQI---STGELFRRNIEEGTKLGVEAKRYLDAGDLV 59
Query: 106 DFEL 109
+L
Sbjct: 60 PSDL 63
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 33.5 bits (75), Expect = 0.031
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLN 68
F I + G SGK +A + +LN
Sbjct: 6 GFTIFLTGYMNSGKDAIARALQVTLN 31
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 33.4 bits (75), Expect = 0.038
Identities = 12/96 (12%), Positives = 26/96 (27%), Gaps = 1/96 (1%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHP 102
+I + GG SGK T KI++ ++ V + K
Sbjct: 8 SKIIFVVGGPGSGKGTQCEKIVQKYGYTHLS-TGDLLRAEVSSGSARGKMLSEIMEKGQL 66
Query: 103 DAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETR 138
+ L + + + + + +
Sbjct: 67 VPLETVLDMLRDAMVAKVDTSKGFLIDGYPREVKQG 102
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 32.7 bits (73), Expect = 0.063
Identities = 8/34 (23%), Positives = 18/34 (52%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVPWVTLLSMD 78
+ + G S SGK+ VA+++ L+ ++ +
Sbjct: 8 IYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLH 41
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 33.4 bits (76), Expect = 0.067
Identities = 22/197 (11%), Positives = 46/197 (23%), Gaps = 34/197 (17%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLL---------------SMDSFYRVL-----N 85
I + G GK+T + + + TL + Y
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAASGGSPTLYFPEPMAYWRTLFETDVISGIYDTQNRKQQG 68
Query: 86 EEQHKKAAQNEYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYN--------FVTHSRET 137
AA ++ + +L L G + S
Sbjct: 69 NLAVDDAALITAHYQSRFTTPYLILHDHTCTLFGGNSLQRGTQPDLTLVFDRHPVASTVC 128
Query: 138 RTKPMYGANVIIFEGILAFHNPQVLEL-LDMKVFVDTDADVRLARRLKRDILARGRDLEG 196
Y + ++A E V + + + R + R R E
Sbjct: 129 FPAARYLLGDMSMCALMAMVATLPREPQGGNIVVTTLNVEEHIRR-----LRTRARIGEQ 183
Query: 197 VIKQYVNMVKPAFSTFI 213
+ + ++ + +
Sbjct: 184 IDITLIATLRNVYFMLV 200
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 32.6 bits (73), Expect = 0.074
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKA 92
I + G +GK T A I+E +P ++ M E K+A
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQA 49
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 32.2 bits (72), Expect = 0.080
Identities = 8/53 (15%), Positives = 21/53 (39%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYN 98
I G SGK+T+A + + L++ ++ + + + + +
Sbjct: 3 IVFIGFMGSGKSTLARALAKDLDLVFLDSDFLIEQKFNQKVSEIFEQKRENFF 55
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase
(APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 32.3 bits (72), Expect = 0.089
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPW 71
+ + G S +GKTTV+ + E L
Sbjct: 19 GCTVWLTGLSGAGKTTVSMALEEYLVCHG 47
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 31.8 bits (71), Expect = 0.11
Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDH 101
+ + G +GK T A KI+ + +P + S +R +E Q + D
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAYGIPHI---STGDMFRAAMKEGTPLGLQAKQYMDR 55
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB
{Escherichia coli [TaxId: 562]}
Length = 433
Score = 32.6 bits (73), Expect = 0.14
Identities = 22/235 (9%), Positives = 53/235 (22%), Gaps = 13/235 (5%)
Query: 46 IGICGGSASGKTTVATKIIESL---NVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHP 102
+ + G + +GK+ + ++ + V + ++ +
Sbjct: 53 LLVNGATGTGKSVLLRELAYTGLLRGDRMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGW 112
Query: 103 DAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQVL 162
F+ QR + T E + + P +
Sbjct: 113 SFFNEIRNDYDWQRY-----ALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMR 167
Query: 163 ELLDMKVFVDTDADVRL-----ARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSM 217
EL D A L + L + + +
Sbjct: 168 ELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFS 227
Query: 218 VHADIIVPRGGENCVAIDLIVQHIHSQLQAVLLMDATVATGAAAMMAIRILLDHD 272
+ + + P GG + + L + + + + R L
Sbjct: 228 IRSWLEDPNGGNLFITWREDMGPALRPLISAWVDVVCTSILSLPEEPKRRLWLFI 282
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 31.5 bits (70), Expect = 0.18
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVT 73
+ + G +GK T A + E + +
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFHAAHLA 32
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 31.3 bits (70), Expect = 0.20
Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 3/63 (4%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDAF 105
I G SGK TV+++I + + + S R + + D
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFELKHL---SSGDLLRDNMLRGTEIGVLAKTFIDQGKLI 65
Query: 106 DFE 108
+
Sbjct: 66 PDD 68
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 31.0 bits (69), Expect = 0.21
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVT 73
I + G +GK T A +I+E P ++
Sbjct: 3 IVLMGLPGAGKGTQADRIVEKYGTPHIS 30
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 31.1 bits (69), Expect = 0.23
Identities = 18/204 (8%), Positives = 50/204 (24%), Gaps = 14/204 (6%)
Query: 45 VIGICGGSASGKTTVATKIIESLNVP--WVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHP 102
+ + G GK+TV K+ E L+ +++ F + ++E
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDE----MR 58
Query: 103 DAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQVL 162
+ + K + + +
Sbjct: 59 KLSVEKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINP-- 116
Query: 163 ELLDMKVFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSMVHADI 222
+ ++ D + L+R+ + R + + +T A
Sbjct: 117 ---SVIFLLEADPKIILSRQKRDTTRNRNDYSDESVILETINFARYAATASAVLAGSTVK 173
Query: 223 IVPRGGENCVAIDLIVQHIHSQLQ 246
++ + + I ++
Sbjct: 174 VIVNVEGD---PSIAANEIIRSMK 194
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 30.7 bits (68), Expect = 0.32
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 48 ICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDH 101
+ G +GK T A K+ ++ V + + R + + + + D
Sbjct: 8 LLGPPGAGKGTQAPKLAKNFCVCHL---ATGDMLRAMVASGSELGKKLKATMDA 58
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 30.3 bits (67), Expect = 0.34
Identities = 7/32 (21%), Positives = 15/32 (46%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSM 77
+ G SGK+T+ ++ ++L V +
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDTDVA 35
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 29.7 bits (65), Expect = 0.72
Identities = 30/233 (12%), Positives = 58/233 (24%), Gaps = 18/233 (7%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLN-------VPWVTLLSMDSFYRVLNEEQHKKAAQN 95
+ G G GKTT+A ++ ++ + L Q
Sbjct: 46 NMIYGSIGRVGIGKTTLAKFTVKRVSEAAAKEGLTVKQAYVNAFNAPNLYTILSLIVRQT 105
Query: 96 EYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILA 155
Y A ++ + + + + + + P A + +
Sbjct: 106 GYPIQVRGAPALDI---LKALVDNLYVENHYLLVILDEFQSMLSSPRIAAEDLYTLLRVH 162
Query: 156 FHNPQVLELLDMKV-FVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIA 214
P + + V +D R K + + + Y + A
Sbjct: 163 EEIPSRDGVNRIGFLLVASDVRALSYMREKIPQVESQIGFKLHLPAYKSRELYTILEQRA 222
Query: 215 PSMVHADIIVPRGGENCVAIDLIVQHIHSQLQAVLLMD-ATVATGAAAMMAIR 266
+ + PR ++LI A VA A MA
Sbjct: 223 ELGLRDTVWEPR------HLELISDVYGEDKGGDGSARRAIVALKMACEMAEA 269
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 29.6 bits (65), Expect = 0.74
Identities = 25/238 (10%), Positives = 67/238 (28%), Gaps = 32/238 (13%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNE------ 96
P + I G A GK+T + ++ V + ++ + K
Sbjct: 2 PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTAQSLGNLLD 61
Query: 97 --YNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYN-----------------FVTHSRET 137
Y ++ F+ L RLK + ++
Sbjct: 62 MMYREPARWSYTFQTFS-FLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLF 120
Query: 138 RTKPMYGANVIIFEGILAFHNPQVLEL--LDMKVFVDTDADVRLARRLK---RDILARGR 192
+ I++ +F + L +++ V L R + +
Sbjct: 121 ENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIYLQASPQVCLKRLYQRAREEEKGIEL 180
Query: 193 D-LEGVIKQYVNMVKPAFSTFIAPSMVHADIIVPRGGENCVAIDLIVQHIHSQLQAVL 249
LE + Q+ + + ++++ ++V ++ + + ++ +
Sbjct: 181 AYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREVNTFV 238
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 29.3 bits (65), Expect = 0.89
Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKA--A 93
++GE I G + +GKT I +L L+ E+H A
Sbjct: 24 ESGE-----YFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVY 78
Query: 94 QNEYNFDHPDAFDFELLLPTLQRLKEGKKVD 124
QN F H + ++++K+ K+V
Sbjct: 79 QNYSLFPHMNVKKNLEFGMRMKKIKDPKRVL 109
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 29.3 bits (65), Expect = 0.97
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 43 PFVIGICGGSASGKTTVATKI 63
PFVI + G + +GKTT K+
Sbjct: 11 PFVIMVVGVNGTGKTTSCGKL 31
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 29.4 bits (65), Expect = 1.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 43 PFVIGICGGSASGKTTVATKI 63
P+VI + G +GK T A K+
Sbjct: 12 PYVIMLVGVQGTGKATTAGKL 32
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 29.1 bits (64), Expect = 1.1
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 46 IGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHK 90
I I G S +GK+T+ K+ + +S + E K
Sbjct: 4 IVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGK 48
>d1ad1a_ c.1.21.1 (A:) Dihydropteroate synthetase {Staphylococcus
aureus [TaxId: 1280]}
Length = 264
Score = 29.4 bits (65), Expect = 1.1
Identities = 36/256 (14%), Positives = 77/256 (30%), Gaps = 30/256 (11%)
Query: 61 TKIIESLNVPWVTLLSMDSFY---RVLNEEQHKKAAQNEYNFDHPDAFD---------FE 108
TKI+ LNV + DSF + N E + + + D D E
Sbjct: 3 TKIMGILNV------TPDSFSDGGKFNNVESAVTRVKAMMD-EGADIIDVGGVSTRPGHE 55
Query: 109 LLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHNPQVLELLDMK 168
++ + + V+ + V S +T + A + G+ ++
Sbjct: 56 MITVEEELNRVLPVVEAIVGFDVKISVDTFRSEV--AEACLKLGVDIINDQWAGLYDHRM 113
Query: 169 VFVDTDADVRLARRLKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSMVHADIIVPRGG 228
V D + + +E ++ + A I + + D G
Sbjct: 114 FQVVAKYDAEIVLMHNGNGNRDEPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDP-----G 168
Query: 229 ENCVAIDLIVQHIHSQLQAVLLMDATVATGAAAMMAIRILLDHDVLLMDATVATGAAAMM 288
+ ++L ++ + V + + ++ +D ++ T A
Sbjct: 169 IGFAKTRNEEAEVMARLDELVATEYPVLLATSRKRFTKEMMGYDTTPVERDEVTAATTAY 228
Query: 289 AI----RILLDHDVPE 300
I R + H+V
Sbjct: 229 GIMKGVRAVRVHNVEL 244
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 28.9 bits (64), Expect = 1.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 43 PFVIGICGGSASGKTTVATKI 63
PFVI + G + GKTT K+
Sbjct: 9 PFVILMVGVNGVGKTTTIGKL 29
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 28.8 bits (63), Expect = 1.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 45 VIGICGGSASGKTTVATKIIESL 67
+ + G GKTT+ K E L
Sbjct: 3 HVFLTGPPGVGKTTLIHKASEVL 25
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 28.4 bits (63), Expect = 1.9
Identities = 13/87 (14%), Positives = 24/87 (27%), Gaps = 5/87 (5%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQN 95
GE + G S GK+T+ I + L + +
Sbjct: 24 HEGE-----FVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVF 78
Query: 96 EYNFDHPDAFDFELLLPTLQRLKEGKK 122
+ +P E + L+ K+
Sbjct: 79 QSYALYPHLSVAENMSFGLKLAGAKKE 105
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 28.1 bits (61), Expect = 2.2
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 46 IGICGGSASGKTTVATKIIESLN 68
I I G +GK T+ K+ +
Sbjct: 3 IAIEGVDGAGKRTLVEKLSGAFR 25
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 27.8 bits (61), Expect = 2.4
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 43 PFVIGICGGSASGKTTVATKI 63
V+ + G + GKTT K+
Sbjct: 6 GRVVLVVGVNGVGKTTTIAKL 26
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole
carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Length = 163
Score = 27.6 bits (61), Expect = 2.7
Identities = 22/122 (18%), Positives = 41/122 (33%), Gaps = 5/122 (4%)
Query: 160 QVLELLDMKVFVDTDADVRLARR-LKRDILARGRDLEGVIKQYVNMVKPAFSTFIAPSMV 218
++ E+L++ V+ + R + A + +I IA +
Sbjct: 22 EIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIA--GAGGAAHLPGMIAAKTL 79
Query: 219 HADIIVPRGGENCVAIDLIVQHIHSQLQ-AVLLMDATVATGA-AAMMAIRILLDHDVLLM 276
+ VP +D + + V + A A AA++A +IL HD L
Sbjct: 80 VPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELH 139
Query: 277 DA 278
Sbjct: 140 QR 141
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 27.7 bits (61), Expect = 2.7
Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQN 95
+ GE GI G S +GKTT +II L+VP L D N +
Sbjct: 29 ENGE-----RFGILGPSGAGKTTFM-RIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDR 82
Query: 96 EYNFDHPD 103
+
Sbjct: 83 KIGMVFQT 90
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 27.6 bits (60), Expect = 2.8
Identities = 6/23 (26%), Positives = 14/23 (60%)
Query: 46 IGICGGSASGKTTVATKIIESLN 68
+ + G S +GK+T+ K+ + +
Sbjct: 3 VVLSGPSGAGKSTLLKKLFQEHS 25
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 27.7 bits (60), Expect = 2.8
Identities = 19/147 (12%), Positives = 32/147 (21%), Gaps = 6/147 (4%)
Query: 45 VIGICGGSASGKTTVATKIIESLN-----VPWVTLLSMDSFY-RVLNEEQHKKAAQNEYN 98
V+ + G SA GK+TV + E + V T V Q +
Sbjct: 4 VVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRFQQLID 63
Query: 99 FDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVIIFEGILAFHN 158
+ + +
Sbjct: 64 QGELLEWAEIHGGLHRSGTLAQPVRAAAATGVPVLIEVDLAGARAIKKTMPEAVTVFLAP 123
Query: 159 PQVLELLDMKVFVDTDADVRLARRLKR 185
P +L + T+ + RRL
Sbjct: 124 PSWQDLQARLIGRGTETADVIQRRLDT 150
>d3dcxa1 b.55.1.13 (A:9-124) Uncharacterized protein Shew0819
{Shewanella loihica [TaxId: 359303]}
Length = 116
Score = 26.6 bits (59), Expect = 3.4
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Query: 439 DTSRDEFIFYSKRLIRLVIEFALSLLPFKVSIHSIAY 475
RD F+F +KRLI + + KVS HS+ Y
Sbjct: 30 RVIRDMFVFTNKRLILIDKQGVTGK---KVSYHSVPY 63
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 27.6 bits (61), Expect = 3.4
Identities = 15/95 (15%), Positives = 35/95 (36%), Gaps = 10/95 (10%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVATKI-----IESLNVPWVTLLSMDSFYRVLNEEQHK 90
G+ ++ + G + +GKTT + I + + + + V+N
Sbjct: 30 PRGQ-----IVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIA 84
Query: 91 KAAQNEYNFDHPDAFDFELLLPTLQRLKEGKKVDV 125
+ F ++ ++ ++ KEG K D+
Sbjct: 85 LVPEGRRIFPELTVYENLMMGAYNRKDKEGIKRDL 119
>d1vcha1 c.61.1.1 (A:2-175) Putative phosphoribosyltransferase
TTHA1613 {Thermus thermophilus [TaxId: 274]}
Length = 174
Score = 27.3 bits (60), Expect = 3.6
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 262 MMAIRILLDHDVLLMDATVATGAAAMMAIRILLDH 296
LL+ V+L+ VA+G +++L
Sbjct: 111 RRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRA 145
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Length = 207
Score = 27.4 bits (60), Expect = 3.7
Identities = 16/103 (15%), Positives = 29/103 (28%), Gaps = 1/103 (0%)
Query: 42 EPFVIGICGGSASGKTTVATKIIESL-NVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFD 100
+ + + G SGKTT A K+ LL R EQ + +
Sbjct: 9 DRNLWFLVGLQGSGKTTTAAKLALYYKGKGRRPLLVAADTQRPAAREQLRLLGEKVGVPV 68
Query: 101 HPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMY 143
+ ++ + + T R +P+
Sbjct: 69 LEVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLM 111
>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic
enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}
Length = 308
Score = 27.6 bits (61), Expect = 3.7
Identities = 17/123 (13%), Positives = 39/123 (31%), Gaps = 12/123 (9%)
Query: 8 STKKLSAESILQSKTRTIYTAGRP-----PWYNKAGEQVEPFVIGICGGS------ASGK 56
+++ ++ I+ P +A GS +G
Sbjct: 117 FNEEVIRAMAEINERPIIFALSNPTSKAECTAEEA-YTFTNGAALYASGSPFPNFELNGH 175
Query: 57 TTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQNEYNFDHPDAFDFELLLPTLQR 116
T + + P V L ++ R ++ + AA+ + D+ + P L+
Sbjct: 176 TYKPGQGNNAYIFPGVALGTILFQIRHVDNDLFLLAAKKVASCVTEDSLKVGRVYPQLKE 235
Query: 117 LKE 119
++E
Sbjct: 236 IRE 238
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 27.2 bits (59), Expect = 3.9
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 46 IGICGGSASGKTTVATKIIESLN 68
I + G +GK+T + K++E+L
Sbjct: 6 IVLEGVDRAGKSTQSRKLVEALC 28
>d3b77a1 b.55.1.13 (A:14-203) Uncharacterized protein Exig2160
{Exiguobacterium sibiricum 255-15 [TaxId: 262543]}
Length = 190
Score = 27.1 bits (60), Expect = 4.0
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 440 TSRDEFIFYSKRLIRLVIEFALSLLPFKVSIHSIAYAFPNVKIVT 484
+ DE+ F + L+ L E A+S K ++ YA ++ V
Sbjct: 34 SKTDEYCFTNLALVHLDGESAVSS---KRVLYRYPYAHYPIRHVM 75
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter
vinelandii [TaxId: 354]}
Length = 233
Score = 27.4 bits (60), Expect = 4.0
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 389 RTRVSRVLLRGFKLRPTLAQSYAGQPLPEALALLPETPQIKGLHTFIRNKD 439
R + R F+ P LA Y P E A+ ++ L IR+ D
Sbjct: 29 AVESGRQIDRFFRNNPHLAVQYLADPFWERRAIAVRYSPVEALTPLIRDSD 79
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 27.8 bits (61), Expect = 4.1
Identities = 18/118 (15%), Positives = 42/118 (35%), Gaps = 14/118 (11%)
Query: 39 EQVEPFVIGICGGSASGKTTVATKIIESLNVP-------------WVTLLSMDSFYRVL- 84
+V P I + G + GKT +A ++ + N P +V +
Sbjct: 45 HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTD 104
Query: 85 NEEQHKKAAQNEYNFDHPDAFDFELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPM 142
+ + + + N + E +L L + + +V ++ + +R+ K +
Sbjct: 105 SAMKLVRQQEIAKNRARAEDVAEERILDALLPPAKNQWGEVENHDSHSSTRQAFRKKL 162
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 27.2 bits (60), Expect = 4.1
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVA 60
K GE VIGI G S SGK+T+
Sbjct: 27 KQGE-----VIGIVGRSGSGKSTLT 46
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 27.1 bits (60), Expect = 4.5
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 6/35 (17%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVATKIIESLNVP 70
+ +I G S GK+T+ ++E P
Sbjct: 26 QPNS-----IIAFAGPSGGGKSTIF-SLLERFYQP 54
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 27.5 bits (60), Expect = 4.6
Identities = 14/99 (14%), Positives = 33/99 (33%), Gaps = 19/99 (19%)
Query: 8 STKKLSAESILQS--KTRTIYTAGRPPWYNK------AGEQVEPFVIGICGGSASGKTTV 59
S + L + +L + K T Y R ++ ++ F + + G + SGK+ +
Sbjct: 3 SRQMLDRKLLLGNVPKQMTCY--IREYHVDRVIKKLDEMCDLDSFFLFLHGRAGSGKSVI 60
Query: 60 ATKIIESLN---------VPWVTLLSMDSFYRVLNEEQH 89
A++ + + + W+
Sbjct: 61 ASQALSKSDQLIGINYDSIVWLKDSGTAPKSTFDLFTDI 99
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli [TaxId:
562]}
Length = 210
Score = 26.8 bits (58), Expect = 5.1
Identities = 20/138 (14%), Positives = 39/138 (28%), Gaps = 18/138 (13%)
Query: 46 IGICGGSASGKTTVATKIIESLNV-----------PWVTLLSMDSFYRVLNEE---QHKK 91
I I G +GKTT ++E+L P T L+ +L+ +
Sbjct: 5 IVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGTQLAEKLRSLLLDIKSVGDEVI 64
Query: 92 AAQNEYNFDHPDAFDF--ELLLPTLQRLKEGKKVDVPIYNFVTHSRETRTKPMYGANVII 149
+ E + ++ P L + + +
Sbjct: 65 TDKAEVLMFYAARVQLVETVIKPALA--NGTWVIGDRHDLSTQAYQGGGRGIDQHMLATL 122
Query: 150 FEGILAFHNPQVLELLDM 167
+ +L P + LD+
Sbjct: 123 RDAVLGDFRPDLTLYLDV 140
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 26.8 bits (58), Expect = 6.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 46 IGICGGSASGKTTVATKIIESLN 68
I I G +GKTT + + L
Sbjct: 6 ILIEGLDRTGKTTQCNILYKKLQ 28
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 26.7 bits (57), Expect = 7.2
Identities = 12/48 (25%), Positives = 18/48 (37%)
Query: 48 ICGGSASGKTTVATKIIESLNVPWVTLLSMDSFYRVLNEEQHKKAAQN 95
+ G GKTT A + + L + + D + L K A N
Sbjct: 57 LYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDN 104
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 26.4 bits (58), Expect = 7.5
Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVA 60
+ GE V + G + SGK+TVA
Sbjct: 38 RPGE-----VTALVGPNGSGKSTVA 57
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC
transporter MsbA, C-terminal domain {Salmonella
typhimurium [TaxId: 90371]}
Length = 253
Score = 26.3 bits (58), Expect = 7.7
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 6/46 (13%)
Query: 36 KAGEQVEPFVIGICGGSASGKTTVATKIIESLNVPWVTLLSMDSFY 81
AG+ + + G S SGK+T+A +I + MD
Sbjct: 39 PAGK-----TVALVGRSGSGKSTIA-SLITRFYDIDEGHILMDGHD 78
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 318
Score = 26.5 bits (57), Expect = 8.2
Identities = 15/79 (18%), Positives = 26/79 (32%), Gaps = 9/79 (11%)
Query: 48 ICGGSASGKTTVATKIIESL---------NVPWVTLLSMDSFYRVLNEEQHKKAAQNEYN 98
I G+ SGKT V T I L N+ +T + + + A +
Sbjct: 29 IMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDVW 88
Query: 99 FDHPDAFDFELLLPTLQRL 117
+ +L + R+
Sbjct: 89 ISTFHSMCVRILRRDIDRI 107
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 26.4 bits (57), Expect = 9.5
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 43 PFVIGICGGSASGKTTVATKIIESLNVPWVTLLSM 77
+GI G GK+T + L + +
Sbjct: 51 AIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVL 85
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.397
Gapped
Lambda K H
0.267 0.0449 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,990,411
Number of extensions: 97370
Number of successful extensions: 497
Number of sequences better than 10.0: 1
Number of HSP's gapped: 480
Number of HSP's successfully gapped: 123
Length of query: 542
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 452
Effective length of database: 1,171,896
Effective search space: 529696992
Effective search space used: 529696992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.7 bits)