BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9619
(407 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O01666|ATPG_DROME ATP synthase subunit gamma, mitochondrial OS=Drosophila
melanogaster GN=ATPsyn-gamma PE=2 SV=2
Length = 297
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 186/244 (76%), Gaps = 8/244 (3%)
Query: 1 MFSKTALLVPQCMQ-----QQTRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAE 55
M +T LL+P M+ QQ R MATLK ISIRLKSVKNIQKITQSMKMVSAAKY RAE
Sbjct: 2 MMQRTQLLLPLAMEATMLAQQQRGMATLKMISIRLKSVKNIQKITQSMKMVSAAKYARAE 61
Query: 56 RELKAAKPIGAGASAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRNEL 115
R+LKAA+P G GA F+ K E+ E E PK+LLIAVTSDRGLCGAVHT VAR IR EL
Sbjct: 62 RDLKAARPYGIGAQQFFEKTEIQPDEKAE-PKKLLIAVTSDRGLCGAVHTGVARLIRGEL 120
Query: 116 QTKGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET--SKYNFT 173
V +GDKSRAIL RLYG NI++ ANEVGR PPTFLDASK+A E + Y++T
Sbjct: 121 AQDEANTKVFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYT 180
Query: 174 SGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYA 233
GKI+YN+FKSVVSY S LPIFS ++V + KL VYDSLD+DV++SYLEFS+A++++Y
Sbjct: 181 EGKIVYNRFKSVVSYQCSTLPIFSGSTVEKSEKLAVYDSLDSDVVKSYLEFSLASLIFYT 240
Query: 234 MKEG 237
MKEG
Sbjct: 241 MKEG 244
Score = 264 bits (674), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 147/168 (87%), Gaps = 2/168 (1%)
Query: 242 VITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET--SKYNFTSGKIIYNK 299
V +GDKSRAIL RLYG NI++ ANEVGR PPTFLDASK+A E + Y++T GKI+YN+
Sbjct: 129 VFCVGDKSRAILSRLYGKNILMVANEVGRLPPTFLDASKIANEVLQTGYDYTEGKIVYNR 188
Query: 300 FKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKEGACSE 359
FKSVVSY S LPIFS ++V + KL VYDSLD+DV++SYLEFS+A++++Y MKEGACSE
Sbjct: 189 FKSVVSYQCSTLPIFSGSTVEKSEKLAVYDSLDSDVVKSYLEFSLASLIFYTMKEGACSE 248
Query: 360 QSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
QSSRMT+MDNASKNAGEMI+KLTLTFNRTRQAVITRELIEIISGA+AL
Sbjct: 249 QSSRMTAMDNASKNAGEMIDKLTLTFNRTRQAVITRELIEIISGAAAL 296
>sp|P36542|ATPG_HUMAN ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1
PE=1 SV=1
Length = 298
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/248 (51%), Positives = 177/248 (71%), Gaps = 16/248 (6%)
Query: 1 MFSKTAL-------LVPQCMQQQTRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTR 53
MFS+ + L PQ +Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY R
Sbjct: 1 MFSRAGVAGLSAWTLQPQWIQ--VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYAR 58
Query: 54 AERELKAAKPIGAGASAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRN 113
AERELK A+ G G+ A Y KA++ PE + K LLI V+SDRGLCGA+H+S+A+ +++
Sbjct: 59 AERELKPARIYGLGSLALYEKADIKGPE--DKKKHLLIGVSSDRGLCGAIHSSIAKQMKS 116
Query: 114 ELQT---KGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TS 168
E+ T G +V+++ IGDK R IL R + + ++A EVGR+PPTF DAS +A E S
Sbjct: 117 EVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNS 176
Query: 169 KYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAA 228
Y F G II+NKF+SV+SY T + PIFSL +V +A + +YD +DADV+Q+Y E+++A
Sbjct: 177 GYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLAN 236
Query: 229 MLYYAMKE 236
++YY++KE
Sbjct: 237 IIYYSLKE 244
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/173 (59%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TSKYNFTSGK 294
G +V+++ IGDK R IL R + + ++A EVGR+PPTF DAS +A E S Y F G
Sbjct: 125 GKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGS 184
Query: 295 IIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 354
II+NKF+SV+SY T + PIFSL +V +A + +YD +DADV+Q+Y E+++A ++YY++KE
Sbjct: 185 IIFNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKE 244
Query: 355 GACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
SEQS+RMT+MDNASKNA EMI+KLTLTFNRTRQAVIT+ELIEIISGA+AL
Sbjct: 245 STTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>sp|P05631|ATPG_BOVIN ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1
PE=1 SV=3
Length = 298
Score = 252 bits (644), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 126/248 (50%), Positives = 177/248 (71%), Gaps = 16/248 (6%)
Query: 1 MFSKTAL-------LVPQCMQQQTRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTR 53
MFS+ + + PQ +Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY R
Sbjct: 1 MFSRAGVAGLSAWTVQPQWIQ--VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYAR 58
Query: 54 AERELKAAKPIGAGASAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRN 113
AERELK A+ G G+ A Y KA++ TPE + K L+I V+SDRGLCGA+H+SVA+ +++
Sbjct: 59 AERELKPARVYGVGSLALYEKADIKTPE--DKKKHLIIGVSSDRGLCGAIHSSVAKQMKS 116
Query: 114 E---LQTKGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TS 168
E L G +V +I +GDK R+IL R + + ++ EVGRRPPTF DAS +A E S
Sbjct: 117 EAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNS 176
Query: 169 KYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAA 228
Y F G II+N+F+SV+SY T + PIFSL ++++A + +YD +DADV+++Y E+S+A
Sbjct: 177 GYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTISSAESMSIYDDIDADVLRNYQEYSLAN 236
Query: 229 MLYYAMKE 236
++YY++KE
Sbjct: 237 IIYYSLKE 244
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/173 (58%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TSKYNFTSGK 294
G +V +I +GDK R+IL R + + ++ EVGRRPPTF DAS +A E S Y F G
Sbjct: 125 GKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGS 184
Query: 295 IIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 354
II+N+F+SV+SY T + PIFSL ++++A + +YD +DADV+++Y E+S+A ++YY++KE
Sbjct: 185 IIFNRFRSVISYKTEEKPIFSLDTISSAESMSIYDDIDADVLRNYQEYSLANIIYYSLKE 244
Query: 355 GACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
SEQS+RMT+MDNASKNA EMI+KLTLTFNRTRQAVIT+ELIEIISGA+AL
Sbjct: 245 STTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>sp|Q5RBS9|ATPG_PONAB ATP synthase subunit gamma, mitochondrial OS=Pongo abelii GN=ATP5C1
PE=2 SV=1
Length = 297
Score = 252 bits (643), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/248 (51%), Positives = 177/248 (71%), Gaps = 16/248 (6%)
Query: 1 MFSKTAL-------LVPQCMQQQTRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTR 53
MFS+ + L PQ +Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY R
Sbjct: 1 MFSRAGVAGLSAWTLQPQWIQ--VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYAR 58
Query: 54 AERELKAAKPIGAGASAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRN 113
AERELK A+ G G+ A Y KA++ PE + K LLI V+SDRGLCGA+H+S+A+ +++
Sbjct: 59 AERELKPARIYGLGSLALYEKADIKGPE--DKKKHLLIGVSSDRGLCGAIHSSIAKQMKS 116
Query: 114 ELQT---KGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TS 168
E+ T G +V+++ +GDK R IL R + + ++A EVGR+PPTF DAS +A E S
Sbjct: 117 EVATLTAAGKEVMLVGVGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNS 176
Query: 169 KYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAA 228
Y F G II+NKF+SV+SY T + PIFSL +V +A + +YD +DADV+Q+Y E+++A
Sbjct: 177 GYEFDEGSIIFNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLAN 236
Query: 229 MLYYAMKE 236
++YY++KE
Sbjct: 237 IIYYSLKE 244
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/173 (58%), Positives = 136/173 (78%), Gaps = 2/173 (1%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TSKYNFTSGK 294
G +V+++ +GDK R IL R + + ++A EVGR+PPTF DAS +A E S Y F G
Sbjct: 125 GKEVMLVGVGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGS 184
Query: 295 IIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 354
II+NKF+SV+SY T + PIFSL +V +A + +YD +DADV+Q+Y E+++A ++YY++KE
Sbjct: 185 IIFNKFRSVISYKTEEKPIFSLNTVASADSMSIYDDIDADVLQNYQEYNLANIIYYSLKE 244
Query: 355 GACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
SEQS+RMT+MDNASKNA EMI+KLTLTFNRTRQAVIT+ELIEIISGA+AL
Sbjct: 245 STTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>sp|Q4R5B0|ATPG_MACFA ATP synthase subunit gamma, mitochondrial OS=Macaca fascicularis
GN=ATP5C1 PE=2 SV=1
Length = 298
Score = 251 bits (641), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/248 (50%), Positives = 177/248 (71%), Gaps = 16/248 (6%)
Query: 1 MFSKTAL-------LVPQCMQQQTRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTR 53
MFS+ + L PQ +Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY R
Sbjct: 1 MFSRAGVAGLSAWTLQPQWIQ--VRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYAR 58
Query: 54 AERELKAAKPIGAGASAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRN 113
AERELK A+ G G+ A Y KA++ PE + K LLI V+SDRGLCGA+H+S+A+ +++
Sbjct: 59 AERELKPARIYGLGSLALYEKADIKVPE--DKKKHLLIGVSSDRGLCGAIHSSIAKQMKS 116
Query: 114 ELQT---KGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TS 168
E+ T G +V+++ IGDK R IL R + + ++A EVGR+PPTF DAS +A E S
Sbjct: 117 EVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNS 176
Query: 169 KYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAA 228
Y F G +I+N+F+SV+SY T + PIFSL ++ +A + +YD +DADV+Q+Y E+++A
Sbjct: 177 GYEFDEGSVIFNRFRSVISYKTEEKPIFSLNTIASAESMSIYDDIDADVLQNYQEYNLAN 236
Query: 229 MLYYAMKE 236
++YY++KE
Sbjct: 237 IIYYSLKE 244
Score = 216 bits (549), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 137/173 (79%), Gaps = 2/173 (1%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TSKYNFTSGK 294
G +V+++ IGDK R IL R + + ++A EVGR+PPTF DAS +A E S Y F G
Sbjct: 125 GKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGS 184
Query: 295 IIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 354
+I+N+F+SV+SY T + PIFSL ++ +A + +YD +DADV+Q+Y E+++A ++YY++KE
Sbjct: 185 VIFNRFRSVISYKTEEKPIFSLNTIASAESMSIYDDIDADVLQNYQEYNLANIIYYSLKE 244
Query: 355 GACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
+ SEQS+RMT+MDNASKNA EMI+KLTLTFNRTRQAVIT+ELIEIISGA+AL
Sbjct: 245 SSTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>sp|Q91VR2|ATPG_MOUSE ATP synthase subunit gamma, mitochondrial OS=Mus musculus GN=Atp5c1
PE=1 SV=1
Length = 298
Score = 248 bits (633), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 176/246 (71%), Gaps = 12/246 (4%)
Query: 1 MFSKTALL-VPQCMQQ----QTRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAE 55
MFS+ +++ + C Q Q RNMATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAE
Sbjct: 1 MFSRASVVGLSACAVQPQWIQVRNMATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAE 60
Query: 56 RELKAAKPIGAGASAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRNE- 114
RELK A+ G G+ A Y KA++ PE + K L+I V+SDRGLCGA+H+SVA+ ++NE
Sbjct: 61 RELKPARVYGTGSLALYEKADIKAPE--DKKKHLIIGVSSDRGLCGAIHSSVAKQMKNEV 118
Query: 115 --LQTKGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TSKY 170
L G +V+++ +G+K + IL R + + +++ +VGR+PPTF DAS +A E S Y
Sbjct: 119 AALTAAGKEVMIVGVGEKIKGILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGY 178
Query: 171 NFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAML 230
F G II+N+FKSV+SY T + PIFSL ++ A + +YD +DADV+Q+Y E+++A ++
Sbjct: 179 EFDEGSIIFNQFKSVISYKTEEKPIFSLNTIATAETMSIYDDIDADVLQNYQEYNLANLI 238
Query: 231 YYAMKE 236
YY++KE
Sbjct: 239 YYSLKE 244
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/173 (55%), Positives = 135/173 (78%), Gaps = 2/173 (1%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TSKYNFTSGK 294
G +V+++ +G+K + IL R + + +++ +VGR+PPTF DAS +A E S Y F G
Sbjct: 125 GKEVMIVGVGEKIKGILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGS 184
Query: 295 IIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 354
II+N+FKSV+SY T + PIFSL ++ A + +YD +DADV+Q+Y E+++A ++YY++KE
Sbjct: 185 IIFNQFKSVISYKTEEKPIFSLNTIATAETMSIYDDIDADVLQNYQEYNLANLIYYSLKE 244
Query: 355 GACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
SEQS+RMT+MDNASKNA +MI+KLTLTFNRTRQAVIT+ELIEIISGA+AL
Sbjct: 245 STTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 297
>sp|P35435|ATPG_RAT ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus
GN=Atp5c1 PE=1 SV=2
Length = 273
Score = 239 bits (611), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/221 (52%), Positives = 164/221 (74%), Gaps = 7/221 (3%)
Query: 21 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTTP 80
ATLK I+ RLKS+KNIQKIT+SMKMV+AAKY RAERELK A+ G G+ A Y KAE+ P
Sbjct: 1 ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGP 60
Query: 81 EGTESPKELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVITIGDKSRAILQR 137
E + K L+I V+SDRGLCGA+H+SVA+ ++N+ L G +V+++ IG+K ++IL R
Sbjct: 61 E--DKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYR 118
Query: 138 LYGNNIILAANEVGRRPPTFLDASKVAQE--TSKYNFTSGKIIYNKFKSVVSYTTSDLPI 195
+ + +++ +VGR+PPTF DAS +A E S Y F G II+N+FKSV+SY T + PI
Sbjct: 119 THSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISYKTEEKPI 178
Query: 196 FSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 236
FS ++V AA + +YD +DADV+Q+Y E+++A ++YY++KE
Sbjct: 179 FSFSTVVAAENMSIYDDIDADVLQNYQEYNLANIIYYSLKE 219
Score = 212 bits (539), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 137/173 (79%), Gaps = 2/173 (1%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE--TSKYNFTSGK 294
G +V+++ IG+K ++IL R + + +++ +VGR+PPTF DAS +A E S Y F G
Sbjct: 100 GKEVMIVGIGEKIKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGS 159
Query: 295 IIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 354
II+N+FKSV+SY T + PIFS ++V AA + +YD +DADV+Q+Y E+++A ++YY++KE
Sbjct: 160 IIFNQFKSVISYKTEEKPIFSFSTVVAAENMSIYDDIDADVLQNYQEYNLANIIYYSLKE 219
Query: 355 GACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
SEQS+RMT+MDNASKNA +MI+KLTLTFNRTRQAVIT+ELIEIISGA+AL
Sbjct: 220 STTSEQSARMTAMDNASKNASDMIDKLTLTFNRTRQAVITKELIEIISGAAAL 272
>sp|P49377|ATPG_KLULA ATP synthase subunit gamma, mitochondrial OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=ATP3 PE=1 SV=1
Length = 289
Score = 149 bits (375), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 136/226 (60%), Gaps = 8/226 (3%)
Query: 17 TRNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAE 76
+RN ATL+ I RLKS+KNI+KIT++MK+V++ + ++AER +AK +AFY AE
Sbjct: 14 SRNYATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADAAFYKNAE 73
Query: 77 VTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRNELQTKGDKVLVITIGDKSRAILQ 136
E E K+L+IA+TSD+GLCG++H+ +A+ +R +L+ + V+ IGDK + L
Sbjct: 74 TVPLEDAEK-KDLIIAITSDKGLCGSIHSQLAKAVRLQLK-QTPNADVVAIGDKVKGQLL 131
Query: 137 RLYGNNIILAANEVGRRPPTFLDASKVAQ---ETSKYNFTSGKIIYNKFKSVVSYTTSDL 193
R +N+ A N VG+ PTF + S +A E N+ I +N S +S+ S+
Sbjct: 132 RTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPSNK 191
Query: 194 PIFSLASVTAAPKLGVYDSLDAD--VIQSYLEFSMAAMLYYAMKEG 237
P+F+ A++ +P ++ +DAD V Q EF+++ + AM EG
Sbjct: 192 PVFNAAAIEQSPSFSKFE-IDADNNVSQDLFEFTLSNEILAAMAEG 236
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 111/187 (59%), Gaps = 6/187 (3%)
Query: 226 MAAMLYYAMKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ-- 283
+A + +K+ V+ IGDK + L R +N+ A N VG+ PTF + S +A
Sbjct: 103 LAKAVRLQLKQTPNADVVAIGDKVKGQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKI 162
Query: 284 -ETSKYNFTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDAD--VIQSYL 340
E N+ I +N S +S+ S+ P+F+ A++ +P ++ +DAD V Q
Sbjct: 163 LEGGASNYKKVSIFWNDPISSLSFEPSNKPVFNAAAIEQSPSFSKFE-IDADNNVSQDLF 221
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
EF+++ + AM EG +E S+R +MDNASKNAG+MI ++ +NRTRQAVIT EL++I
Sbjct: 222 EFTLSNEILAAMAEGYAAEVSARRNAMDNASKNAGDMINSYSILYNRTRQAVITNELVDI 281
Query: 401 ISGASAL 407
I+GAS+L
Sbjct: 282 ITGASSL 288
>sp|P38077|ATPG_YEAST ATP synthase subunit gamma, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ATP3 PE=1
SV=1
Length = 311
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 141/246 (57%), Gaps = 23/246 (9%)
Query: 12 CMQQQT---------RNMATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAK 62
C Q Q R ATLK + +RLKS+KNI+KIT++MK+V++ + ++AE+ +AK
Sbjct: 16 CHQAQVGILYKTNPVRTYATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAK 75
Query: 63 PIGAGASAFYSKAEVTT--PEGTES--PKELLIAVTSDRGLCGAVHTSVARWIRNEL--Q 116
+ FY AE E TE+ PKEL++A+TSD+GLCG++H+ +A+ +R L Q
Sbjct: 76 KMDEAEQLFYKNAETKNLDVEATETGAPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQ 135
Query: 117 TKGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE----TSKYNF 172
D ++TIGDK + L R + NNI L+ N +G+ PTF +++ +A + +
Sbjct: 136 PNAD---IVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTY 192
Query: 173 TSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYD-SLDADVIQSYLEFSMAAMLY 231
I YN S +S+ S+ PIF+ ++ +P G ++ DA+V + E+++A +
Sbjct: 193 PKISIFYNDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQML 252
Query: 232 YAMKEG 237
AM +G
Sbjct: 253 TAMAQG 258
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 108/171 (63%), Gaps = 5/171 (2%)
Query: 242 VITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE----TSKYNFTSGKIIY 297
++TIGDK + L R + NNI L+ N +G+ PTF +++ +A + + I Y
Sbjct: 140 IVTIGDKIKMQLLRTHPNNIKLSINGIGKDAPTFQESALIADKLLSVMKAGTYPKISIFY 199
Query: 298 NKFKSVVSYTTSDLPIFSLASVTAAPKLGVYD-SLDADVIQSYLEFSMAAMLYYAMKEGA 356
N S +S+ S+ PIF+ ++ +P G ++ DA+V + E+++A + AM +G
Sbjct: 200 NDPVSSLSFEPSEKPIFNAKTIEQSPSFGKFEIDTDANVPRDLFEYTLANQMLTAMAQGY 259
Query: 357 CSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
+E S+R +MDNASKNAG+MI + ++ +NRTRQAVIT EL++II+GAS+L
Sbjct: 260 AAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASSL 310
>sp|Q96250|ATPG3_ARATH ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana
GN=ATPC PE=1 SV=1
Length = 325
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 115/181 (63%), Gaps = 12/181 (6%)
Query: 239 KVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSK-YNFTSGKIIY 297
+V + +G+K++AI+ R N+I+L+ E+ + P + S +A + K F + +I+Y
Sbjct: 141 EVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVY 200
Query: 298 NKFKSVVSYTTSDLPIFSLASVTA----APKLGVYDSLD-------ADVIQSYLEFSMAA 346
NKF SVV++ + + S + KLG DS + +++Q+ EF +
Sbjct: 201 NKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSC 260
Query: 347 MLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASA 406
+++ A+ E ACSE +RM++MD++S+NAGEM+++LTLT+NRTRQA IT ELIEIISGASA
Sbjct: 261 VMFNAVLENACSEMGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASA 320
Query: 407 L 407
L
Sbjct: 321 L 321
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 120/227 (52%), Gaps = 28/227 (12%)
Query: 29 RLKSVKNIQKITQSMKMVSAAKYT----RAERELKAAKPIGAGASAFYSKAEVTTPEGTE 84
R+KSVKNIQKIT++MKMV+A+K RAE +P A + +
Sbjct: 51 RMKSVKNIQKITKAMKMVAASKLRAVQGRAENSRGLWQPF---------TALLGDNPSID 101
Query: 85 SPKELLIAVTSDRGLCGAVHTSVARWIRN--ELQTKGDK-VLVITIGDKSRAILQRLYGN 141
K +++ ++SD+GLCG ++++V + R +L +K V + +G+K++AI+ R N
Sbjct: 102 VKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKN 161
Query: 142 NIILAANEVGRRPPTFLDASKVAQETSK-YNFTSGKIIYNKFKSVVSYTTSDLPIFSLAS 200
+I+L+ E+ + P + S +A + K F + +I+YNKF SVV++ + + S
Sbjct: 162 DIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEI 221
Query: 201 VTA----APKLGVYDSLD-------ADVIQSYLEFSMAAMLYYAMKE 236
+ KLG DS + +++Q+ EF + +++ A+ E
Sbjct: 222 IEKESEIGGKLGELDSYEIEGGETKGEILQNLAEFQFSCVMFNAVLE 268
>sp|P26360|ATPG3_IPOBA ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas
GN=ATPC PE=1 SV=2
Length = 326
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 114/177 (64%), Gaps = 12/177 (6%)
Query: 243 ITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSK-YNFTSGKIIYNKFK 301
+ +G+K++A L R +I L E+ + P + S VA + K F + +I++NKF+
Sbjct: 148 VILGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQ 207
Query: 302 SVVSYTTSDLPIFSLASVT----AAPKLGVYDSLD-------ADVIQSYLEFSMAAMLYY 350
SVVS+ + + S V + KLG DS + ++V+Q+ EF +++L+
Sbjct: 208 SVVSFVPTMSTVLSPEVVERESESGGKLGDLDSYEIEGAESKSEVLQNLTEFQFSSVLFN 267
Query: 351 AMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
A+ E ACSEQ +RM++MD++S+NAGEM+++LTLT+NRTRQA IT ELIEIISGASAL
Sbjct: 268 AVLENACSEQGARMSAMDSSSRNAGEMLDRLTLTYNRTRQASITTELIEIISGASAL 324
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 28/227 (12%)
Query: 29 RLKSVKNIQKITQSMKMVSAAKY----TRAERELKAAKPIGAGASAFYSKAEVTTPEGTE 84
R+KSVKNIQKIT++MKMV+A+K TRAE +P A TP +
Sbjct: 54 RMKSVKNIQKITKAMKMVAASKLRAIQTRAENSRGLWQPFTALLG--------DTP-SVD 104
Query: 85 SPKELLIAVTSDRGLCGAVHTSVARWIRN--ELQTKGDKV-LVITIGDKSRAILQRLYGN 141
K ++I ++SD+GLCG ++++ + RN +L + +K + +G+K++A L R
Sbjct: 105 VKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKK 164
Query: 142 NIILAANEVGRRPPTFLDASKVAQETSK-YNFTSGKIIYNKFKSVVSYTTSDLPIFSLAS 200
+I L E+ + P + S VA + K F + +I++NKF+SVVS+ + + S
Sbjct: 165 DIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEV 224
Query: 201 V----TAAPKLGVYDSLD-------ADVIQSYLEFSMAAMLYYAMKE 236
V + KLG DS + ++V+Q+ EF +++L+ A+ E
Sbjct: 225 VERESESGGKLGDLDSYEIEGAESKSEVLQNLTEFQFSSVLFNAVLE 271
>sp|B6IPC7|ATPG_RHOCS ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC
51521 / SW) GN=atpG PE=3 SV=1
Length = 295
Score = 128 bits (321), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 12/184 (6%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKY----NFT 291
EG V ++ +G K R +L+R Y I+ + +VGRR +F DA ++ + + F
Sbjct: 112 EGRTVKLLCVGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFD 171
Query: 292 SGKIIYNKFKSVVSYTTSDLPIFSLASVTA--------APKLGVYDSLDADVIQSYLEFS 343
+IYNKF+S ++ + + A A A L ++ + ++ L +
Sbjct: 172 VATVIYNKFRSAITQVVTAQQVIPFAPAVATEPAETAEAKPLYEFEPNEEKILAELLPRN 231
Query: 344 MAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISG 403
+A +Y A+ E A SEQ +RMT+MDNA++NAG+MI+KLTL +NRTRQA IT+ELIEIISG
Sbjct: 232 LAVQVYSALLESAASEQGARMTAMDNATRNAGDMIKKLTLVYNRTRQASITKELIEIISG 291
Query: 404 ASAL 407
A A+
Sbjct: 292 AEAV 295
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK I R+ SVK+ QKIT +MKMV+A+K RA+ + +A +P + +
Sbjct: 1 MPSLKDIRNRIGSVKSTQKITSAMKMVAASKLRRAQEQAEAGRPFADRMARMLASLAANV 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIRN---ELQTKGDKVLVIT 126
T P+ LL+ VTSDRGLCG ++++ R R L +G V ++
Sbjct: 61 SGATGGPRLMTGTGSDQVHLLVVVTSDRGLCGGFNSTIVREARRTIKRLTGEGRTVKLLC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKY----NFTSGKIIYNKF 182
+G K R +L+R Y I+ + +VGRR +F DA ++ + + F +IYNKF
Sbjct: 121 VGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFDVATVIYNKF 180
Query: 183 KSVVSYTTSDLPIFSLASVTA--------APKLGVYDSLDADVIQSYLEFSMAAMLYYAM 234
+S ++ + + A A A L ++ + ++ L ++A +Y A+
Sbjct: 181 RSAITQVVTAQQVIPFAPAVATEPAETAEAKPLYEFEPNEEKILAELLPRNLAVQVYSAL 240
Query: 235 KE 236
E
Sbjct: 241 LE 242
>sp|O74754|ATPG_SCHPO ATP synthase subunit gamma, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=atp3 PE=3 SV=1
Length = 301
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 129/226 (57%), Gaps = 16/226 (7%)
Query: 21 ATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKA-EVTT 79
ATLK I RLKS+KNI+KIT+++K V+ K TRA+R ++A ++ +Y + EV
Sbjct: 32 ATLKEIEQRLKSIKNIEKITKTIKTVAQTKLTRAQRAMEA-------SNKYYRVSDEVFK 84
Query: 80 PEGTESPKE---LLIAVTSDRGLCGAVHTSVARWIRNELQTKG--DKVLVITIGDKSRAI 134
GT++P+E L++A +SD+GLCG +H+S++R IR EL + + +G+K R
Sbjct: 85 EAGTKAPEEGKTLMVACSSDKGLCGGIHSSISRLIRRELHDPKTFENTSLCILGEKVRTQ 144
Query: 135 LQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKY--NFTSGKIIYNKFKSVVSYTTSD 192
L R + L +G P+F +A +++ ++ ++ ++YNKF S VS+ T
Sbjct: 145 LLRFCPESFYLTFAHIGGASPSFEEALQISSNILEHAKDYDRIVLVYNKFASAVSFETVM 204
Query: 193 LPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKEGD 238
+++ ++ +P L Y+ D +V Q +EF+ A ++ AM E
Sbjct: 205 KNLYTTKAINESPNLSAYEVSD-EVHQPLMEFAFANAIFSAMAEAH 249
Score = 113 bits (283), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 100/165 (60%), Gaps = 3/165 (1%)
Query: 245 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKY--NFTSGKIIYNKFKS 302
+G+K R L R + L +G P+F +A +++ ++ ++ ++YNKF S
Sbjct: 137 LGEKVRTQLLRFCPESFYLTFAHIGGASPSFEEALQISSNILEHAKDYDRIVLVYNKFAS 196
Query: 303 VVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKEGACSEQSS 362
VS+ T +++ ++ +P L Y+ D +V Q +EF+ A ++ AM E CSE SS
Sbjct: 197 AVSFETVMKNLYTTKAINESPNLSAYEVSD-EVHQPLMEFAFANAIFSAMAEAHCSEMSS 255
Query: 363 RMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
R +M+NASK+AG+MI K ++ +NR RQA IT ELI+I++GA++L
Sbjct: 256 RRNAMENASKSAGDMINKFSIQYNRQRQASITNELIDIVTGANSL 300
>sp|A5FZ53|ATPG_ACICJ ATP synthase gamma chain OS=Acidiphilium cryptum (strain JF-5)
GN=atpG PE=3 SV=1
Length = 296
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 107/186 (57%), Gaps = 15/186 (8%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGK- 294
EG +V + T+G K R +R II AN VG++ F DA +A + F GK
Sbjct: 112 EGKQVRLFTVGRKGRDFFRRDMREKIIGEANFVGKKTIEFADAEAIANQIIAA-FNDGKF 170
Query: 295 ----IIYNKFKSVVSYTTSDLPIFSLASVTAA-------PKLGVYD--SLDADVIQSYLE 341
+++N+F SV+S S+ P+ ++ AA G Y+ D ++ L
Sbjct: 171 DVCTLMFNRFVSVMSQVPSETPLIPASAGQAANDNAGSDQPAGDYEIEPDDGTLLDRLLP 230
Query: 342 FSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEII 401
++A +Y A+ E A EQ +RMT+MDNA++NAGEMI +LTL +NRTRQA IT+ELIEII
Sbjct: 231 RNLAVQIYSALLESAAGEQGARMTAMDNATRNAGEMINRLTLNYNRTRQANITKELIEII 290
Query: 402 SGASAL 407
SGA AL
Sbjct: 291 SGAEAL 296
Score = 85.1 bits (209), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 122/244 (50%), Gaps = 28/244 (11%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
MA+LKA+ R+ SVK+ QKIT++MKMV+AAK RA+ + +AA+P +A
Sbjct: 1 MASLKALRNRIASVKSTQKITKAMKMVAAAKLRRAQAQAEAARPYATRMAAMMGALAEGA 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSV---ARWIRNELQTKGDKVLVIT 126
E +P L++ V++DRGL G + S+ AR +L+ +G +V + T
Sbjct: 61 AENPNAPALLVGNGADRTHLIVVVSADRGLAGPFNASINRAARARARKLEAEGKQVRLFT 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGK-----IIYNK 181
+G K R +R II AN VG++ F DA +A + F GK +++N+
Sbjct: 121 VGRKGRDFFRRDMREKIIGEANFVGKKTIEFADAEAIANQIIAA-FNDGKFDVCTLMFNR 179
Query: 182 FKSVVSYTTSDLPIFSLASVTAA-------PKLGVY--DSLDADVIQSYLEFSMAAMLYY 232
F SV+S S+ P+ ++ AA G Y + D ++ L ++A +Y
Sbjct: 180 FVSVMSQVPSETPLIPASAGQAANDNAGSDQPAGDYEIEPDDGTLLDRLLPRNLAVQIYS 239
Query: 233 AMKE 236
A+ E
Sbjct: 240 ALLE 243
>sp|Q2VZN1|ATPG_MAGSA ATP synthase gamma chain OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=atpG PE=3 SV=1
Length = 294
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 109/191 (57%), Gaps = 11/191 (5%)
Query: 228 AMLYYAMKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSK 287
AM +K+G + ++ +G K+R L+R YG +I +GR+ F +A +VA + S
Sbjct: 104 AMAADLLKQGKTIKIMPVGRKAREQLRRDYGQYMIEGFENLGRKGIVFAEADQVASQISA 163
Query: 288 Y----NFTSGKIIYNKFKSVVSYTTS-------DLPIFSLASVTAAPKLGVYDSLDADVI 336
F ++YNKFKS ++ + +P + S T + ++ + +++
Sbjct: 164 MFDAEEFDVCTVVYNKFKSAIAQEVTRQQVIPFPVPEQAAKSETGPKAIYEFEPSEEEIL 223
Query: 337 QSYLEFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRE 396
L ++A ++ A+ E SEQ +RMT+MDNA++NAG+MI L + +NR+RQA IT+E
Sbjct: 224 AEILPRNLATQMFRALLESQASEQGARMTAMDNATRNAGDMINALAIKYNRSRQAQITKE 283
Query: 397 LIEIISGASAL 407
LIEIISGA AL
Sbjct: 284 LIEIISGAEAL 294
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 24/241 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
MA+LK + +++ SVK+ +KIT +MKMV+A+K RA+ +AA+P +
Sbjct: 1 MASLKDLRMKIVSVKSTRKITSAMKMVAASKLRRAQTAAEAARPFAERMERMLGTLAASL 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
+ +P+ LL+AVT+DRGLCG ++S+ R + +L +G + ++
Sbjct: 61 AGQSGAPRMISGTGFDKVHLLVAVTADRGLCGGFNSSIVRATKAMAADLLKQGKTIKIMP 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKY----NFTSGKIIYNKF 182
+G K+R L+R YG +I +GR+ F +A +VA + S F ++YNKF
Sbjct: 121 VGRKAREQLRRDYGQYMIEGFENLGRKGIVFAEADQVASQISAMFDAEEFDVCTVVYNKF 180
Query: 183 KSVVSYTTS-------DLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMK 235
KS ++ + +P + S T + ++ + +++ L ++A ++ A+
Sbjct: 181 KSAIAQEVTRQQVIPFPVPEQAAKSETGPKAIYEFEPSEEEILAEILPRNLATQMFRALL 240
Query: 236 E 236
E
Sbjct: 241 E 241
>sp|A5V3X4|ATPG_SPHWW ATP synthase gamma chain OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=atpG PE=3 SV=1
Length = 294
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 99/183 (54%), Gaps = 11/183 (6%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFT 291
+G V IG K RA+LQRL+ I+ ++ + F DA VA++ S F
Sbjct: 112 QGKTVKFYLIGKKGRAVLQRLFPGKIVHQVDQSHIKNVAFSDAHMVAEDLIGRYSAGEFD 171
Query: 292 SGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGV-------YDSLDADVIQSYLEFSM 344
+ + KF+S + ++L I + Y+ + ++ L ++
Sbjct: 172 VAHLFFAKFQSALVQEPTELQIIPVPLTADTGAAATGASAAVEYEPDEEAILTELLPRNV 231
Query: 345 AAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGA 404
A L+ AM E A SEQ SRMT+MDNA++NAGEMI KLT+ +NRTRQA IT ELIEII+GA
Sbjct: 232 AVQLFRAMLENAASEQGSRMTAMDNATRNAGEMINKLTIQYNRTRQAAITTELIEIIAGA 291
Query: 405 SAL 407
AL
Sbjct: 292 EAL 294
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 101/196 (51%), Gaps = 17/196 (8%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
MA+LKA+ +R+ SVK+ QKIT++MKMV+AAK RA+ +A +P A S
Sbjct: 1 MASLKALKVRITSVKSTQKITKAMKMVAAAKLRRAQMAAEAGRPYAERLDAVMSSLASKV 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
G +SPK LL+ TS+RGL GA +T++ R R + L +G V
Sbjct: 61 TVGPQSPKLLAGTGNDQVHLLVVATSERGLAGAFNTNIVRAARKTADSLIAQGKTVKFYL 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFTSGKIIYNKF 182
IG K RA+LQRL+ I+ ++ + F DA VA++ S F + + KF
Sbjct: 121 IGKKGRAVLQRLFPGKIVHQVDQSHIKNVAFSDAHMVAEDLIGRYSAGEFDVAHLFFAKF 180
Query: 183 KSVVSYTTSDLPIFSL 198
+S + ++L I +
Sbjct: 181 QSALVQEPTELQIIPV 196
>sp|Q4FP37|ATPG_PELUB ATP synthase gamma chain OS=Pelagibacter ubique (strain HTCC1062)
GN=atpG PE=3 SV=1
Length = 291
Score = 115 bits (289), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVA----QETSKYNFT 291
EG + +IT+G K L+R+Y + I+ + + +LDA KV + K F
Sbjct: 112 EGKTLKIITVGSKGYDQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFD 171
Query: 292 SGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGV----YDSLDADVIQSYLEFSMAAM 347
I YNKFK+V++ + I L + A ++ + +++ + L +++
Sbjct: 172 VCTIFYNKFKNVITQIPQEQQIIPLKTSEAEENSSEDNYEFEPDEDEILSNLLPKNISTQ 231
Query: 348 LYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
++ AM E + SEQ SRM++MDNA++NAGEM++KLT+ +NR+RQA IT+ELIEIISGA +L
Sbjct: 232 IFKAMLENSASEQGSRMSAMDNATRNAGEMVDKLTIEYNRSRQAAITKELIEIISGAESL 291
Score = 90.1 bits (222), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 23/240 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP-----------IGAGA 68
MATL + R+ SVK+ QKIT++MKMV+AAK RA+ + +P + +G
Sbjct: 1 MATLDDLKKRIASVKSTQKITKAMKMVAAAKLRRAQENAEKGRPYSEKMNNIILNLSSGI 60
Query: 69 SAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRNELQ---TKGDKVLVI 125
S + ++ + G E L I +TSDRGLCG +T++ + + Q +G + +I
Sbjct: 61 SDKENAPKLLSGTG-EDKVHLCIVLTSDRGLCGGFNTNIIKKAKTYFQKISDEGKTLKII 119
Query: 126 TIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVA----QETSKYNFTSGKIIYNK 181
T+G K L+R+Y + I+ + + +LDA KV + K F I YNK
Sbjct: 120 TVGSKGYDQLKRVYKDAIVERISFKDSKTINYLDAEKVGKMIIENFEKEEFDVCTIFYNK 179
Query: 182 FKSVVSYTTSDLPIFSLASVTAAPKLG----VYDSLDADVIQSYLEFSMAAMLYYAMKEG 237
FK+V++ + I L + A ++ + +++ + L +++ ++ AM E
Sbjct: 180 FKNVITQIPQEQQIIPLKTSEAEENSSEDNYEFEPDEDEILSNLLPKNISTQIFKAMLEN 239
>sp|B7KUA3|ATPG_METC4 ATP synthase gamma chain OS=Methylobacterium chloromethanicum
(strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1
Length = 296
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/187 (36%), Positives = 111/187 (59%), Gaps = 13/187 (6%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYN 289
M +G V +ITIG K +L+R + + II + + G +P + A+++A +
Sbjct: 110 MADGKTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGE 169
Query: 290 FTSGKIIYNKFKSVVS-------YTTSDLPIFSLASVTAAPKLGV--YDSLDADVIQSYL 340
F + Y++F+SV+S ++LP AS T A ++ + ++++ L
Sbjct: 170 FDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGASATGAGSDAAMEFEPNEETILETLL 229
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
++ ++ A+ E A SEQ +RM++MD+A++NAGEMI+K TL +NRTRQA+IT+ELIEI
Sbjct: 230 PKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEI 289
Query: 401 ISGASAL 407
ISGA AL
Sbjct: 290 ISGAEAL 296
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 116/243 (47%), Gaps = 26/243 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVK QKIT++M+MV+AAK RA+ + +P +
Sbjct: 1 MPSLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNL 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
G +P+ LL+ T DRGL GA ++S+AR R N L G V +IT
Sbjct: 61 IGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIIT 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFTSGKIIYNKF 182
IG K +L+R + + II + + G +P + A+++A + F + Y++F
Sbjct: 121 IGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEF 180
Query: 183 KSVVS-------YTTSDLPIFSLASVTAAPKLGV--YDSLDADVIQSYLEFSMAAMLYYA 233
+SV+S ++LP AS T A ++ + ++++ L ++ ++ A
Sbjct: 181 RSVISQIPTAQKLIPAELPTAEGASATGAGSDAAMEFEPNEETILETLLPKNLTVQIFRA 240
Query: 234 MKE 236
+ E
Sbjct: 241 LLE 243
>sp|Q0BQE7|ATPG_GRABC ATP synthase gamma chain OS=Granulibacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1) GN=atpG PE=3 SV=1
Length = 298
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 107/187 (57%), Gaps = 15/187 (8%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE-TSKYN---FT 291
EG V ++T+G K+R L+R ++ + G++ F DA ++Q+ T++ + F
Sbjct: 112 EGKTVKILTVGRKARDYLRRDLETRLLPETSLAGKKVLAFADALALSQQITARLDAGEFD 171
Query: 292 SGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSY-----------L 340
++YN F SV+S T + + AAP S A + + L
Sbjct: 172 VCTLVYNHFNSVISQTPGETQLIPAQVPQAAPADAGASSNGAKAVYEFEPDEETLLAKLL 231
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
++A +Y A+ E A E ++RMT+MDNA++NAG+MI++L+LT+NRTRQA ITRELIEI
Sbjct: 232 PQNLAIQIYRAILESAAGEHAARMTAMDNATRNAGDMIKRLSLTYNRTRQANITRELIEI 291
Query: 401 ISGASAL 407
ISGA AL
Sbjct: 292 ISGAEAL 298
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 111/203 (54%), Gaps = 17/203 (8%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGA------GASAFYS 73
MA+LKA+ R+ SVK+ QKIT +MKMV+A+K RA++ +AA+P A A
Sbjct: 1 MASLKALRGRITSVKSTQKITSAMKMVAASKLRRAQQAAEAARPYAELMQRMLAALADNV 60
Query: 74 KAEVTTPE---GTESPK-ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
+ P GT K LL+ +++DRGL GA +T+V R R N L+++G V ++T
Sbjct: 61 AGSPSAPRILVGTGQDKVHLLVVISADRGLAGAFNTNVGRAARTLANRLESEGKTVKILT 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE-TSKYN---FTSGKIIYNKF 182
+G K+R L+R ++ + G++ F DA ++Q+ T++ + F ++YN F
Sbjct: 121 VGRKARDYLRRDLETRLLPETSLAGKKVLAFADALALSQQITARLDAGEFDVCTLVYNHF 180
Query: 183 KSVVSYTTSDLPIFSLASVTAAP 205
SV+S T + + AAP
Sbjct: 181 NSVISQTPGETQLIPAQVPQAAP 203
>sp|B1ZEE8|ATPG_METPB ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC
BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1
Length = 295
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 111/186 (59%), Gaps = 12/186 (6%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYN 289
M EG V ++T+G K +L+R + + II + + G +P + A+++A +
Sbjct: 110 MAEGKTVKIMTVGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTS-------DLPIFSLASVTAAPKLGV-YDSLDADVIQSYLE 341
F + Y++F+SV+S + +LP A+ A + ++ + ++++ L
Sbjct: 170 FDVATLFYSEFRSVISQIPTAQKIIPAELPQTDGAAKGAGSDAAMEFEPSEETILETLLP 229
Query: 342 FSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEII 401
++ ++ A+ E A SEQ +RM++MD+A++NAGEMI+K TL +NRTRQA+IT+ELIEII
Sbjct: 230 KNLTVQVFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEII 289
Query: 402 SGASAL 407
SGA AL
Sbjct: 290 SGAEAL 295
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 17/185 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVK QKIT++M+MV+AAK RA+ + +P ++ +
Sbjct: 1 MPSLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAEKMASVLANLAGNL 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
G +P+ LL+ T DRGL GA ++S+AR R N L +G V ++T
Sbjct: 61 IGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMAEGKTVKIMT 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFTSGKIIYNKF 182
+G K +L+R + + II + + G +P + A+++A + F + Y++F
Sbjct: 121 VGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEF 180
Query: 183 KSVVS 187
+SV+S
Sbjct: 181 RSVIS 185
>sp|Q1GEU7|ATPG_RUEST ATP synthase gamma chain OS=Ruegeria sp. (strain TM1040) GN=atpG
PE=3 SV=1
Length = 291
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 105/179 (58%), Gaps = 8/179 (4%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTS 292
G V ++T+G K R +L+R +G+ + + + ++DA +A++ ++++ F
Sbjct: 113 GKTVKILTVGKKGRDVLKREFGDLFVGHVDLTEVKRVGYVDAQGIAKDILARFDAGEFDV 172
Query: 293 GKIIYNKFKSVVSYTTSDLPI----FSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAML 348
I Y+KF++VV+ + I F A + Y+ + ++ L +A +
Sbjct: 173 ATIFYSKFQNVVTQIPTAQQIIPAEFDAEGAEATSGVVDYEPSEEAILADLLPRGVATQI 232
Query: 349 YYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
+ + E SEQ +RM++MDNA++NAGEMI+KLT+ +NR+RQAVIT ELIEIISGA AL
Sbjct: 233 FAGLLENGASEQGARMSAMDNATRNAGEMIDKLTIEYNRSRQAVITNELIEIISGAEAL 291
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 111/186 (59%), Gaps = 19/186 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP-------IGAGASAFY 72
M +LK + R+ SVKN +KIT++M+MV+AAK RA+ + A+P + AG +A
Sbjct: 1 MPSLKDLKNRISSVKNTRKITKAMQMVAAAKLRRAQEAAEDARPYAERFNAVMAGLAASV 60
Query: 73 SKAEVTTPE---GTESPK-ELLIAVTSDRGLCGAVHTSVARWIRN---ELQTKGDKVLVI 125
+++ T P+ GT S + +LL+ +T++RGLCG + ++A+ R +LQ G V ++
Sbjct: 61 GQSD-TAPKLLAGTGSDQVQLLVVMTAERGLCGGFNANIAKLARQKVLDLQAAGKTVKIL 119
Query: 126 TIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNK 181
T+G K R +L+R +G+ + + + ++DA +A++ ++++ F I Y+K
Sbjct: 120 TVGKKGRDVLKREFGDLFVGHVDLTEVKRVGYVDAQGIAKDILARFDAGEFDVATIFYSK 179
Query: 182 FKSVVS 187
F++VV+
Sbjct: 180 FQNVVT 185
>sp|A1B8N9|ATPG_PARDP ATP synthase gamma chain OS=Paracoccus denitrificans (strain Pd
1222) GN=atpG PE=3 SV=1
Length = 290
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 106/183 (57%), Gaps = 15/183 (8%)
Query: 236 EGDKVLVITIGDKSRAILQRLYG----NNIILAANEVGRRPPTFLDASKVAQET----SK 287
+G +V ++T+G K R L+R YG N++ L+ EV R + +A +A E
Sbjct: 112 QGKQVSILTVGKKGREQLKREYGDLFVNHVDLS--EVKR--IGYDNARAIADEILDRFDN 167
Query: 288 YNFTSGKIIYNKFKSVVSYTTSD---LPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSM 344
F + YN+F+SV+S + +P A L Y+ + ++ L S+
Sbjct: 168 GEFDVATLFYNRFESVISQVPTARQVIPAVIEEGEAGASSLYDYEPDENAILNDLLPRSV 227
Query: 345 AAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGA 404
A ++ A+ E A SEQ +RMT+MDNA++NAG+MI++LT +NR+RQA IT+ELIEIISGA
Sbjct: 228 ATQVFAALLENAASEQGARMTAMDNATRNAGDMIDRLTTVYNRSRQAAITKELIEIISGA 287
Query: 405 SAL 407
AL
Sbjct: 288 EAL 290
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 127/242 (52%), Gaps = 30/242 (12%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP-------IGAGASAFY 72
M +LK + R+ SVKN +KIT++M+MV+AAK RA+ +AA+P + AG +A
Sbjct: 1 MPSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPYADRMAAVMAGLTAAA 60
Query: 73 SKAEVTTPE---GT-ESPKELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVI 125
+ +++ P GT E + LL+ +TS+RGL G ++S+ + R ELQ +G +V ++
Sbjct: 61 AGSDM-APRLLAGTGEDRRHLLVVMTSERGLAGGFNSSIVKLARLRLQELQAQGKQVSIL 119
Query: 126 TIGDKSRAILQRLYG----NNIILAANEVGRRPPTFLDASKVAQET----SKYNFTSGKI 177
T+G K R L+R YG N++ L+ EV R + +A +A E F +
Sbjct: 120 TVGKKGREQLKREYGDLFVNHVDLS--EVKR--IGYDNARAIADEILDRFDNGEFDVATL 175
Query: 178 IYNKFKSVVSYTTSD---LPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAM 234
YN+F+SV+S + +P A L Y+ + ++ L S+A ++ A+
Sbjct: 176 FYNRFESVISQVPTARQVIPAVIEEGEAGASSLYDYEPDENAILNDLLPRSVATQVFAAL 235
Query: 235 KE 236
E
Sbjct: 236 LE 237
>sp|Q162S8|ATPG_ROSDO ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC
33942 / OCh 114) GN=atpG PE=3 SV=1
Length = 291
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 8/180 (4%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FT 291
EG V ++T+G K R L+R G+ I + + +++DA +A++ ++++ F
Sbjct: 112 EGKDVKILTVGKKGRDQLKRDLGSLFIGHVDLTEIKRVSYVDAQGIAKDVLNRFDVGEFD 171
Query: 292 SGKIIYNKFKSVVSYTTSDLPI----FSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAM 347
I Y KF +VVS + I F A L Y+ + ++ L +A
Sbjct: 172 VATIFYAKFVNVVSQIPTAQQIIPAKFEQQEGEEASTLFDYEPDEEAILADLLPRGVATQ 231
Query: 348 LYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
++ A+ E SEQ +RM++MDNA++NAGEMIE LT+ FNR+RQAVIT ELIEIISGA AL
Sbjct: 232 IFSALLENGASEQGARMSAMDNATRNAGEMIENLTIEFNRSRQAVITNELIEIISGAEAL 291
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 105/185 (56%), Gaps = 17/185 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP---------IGAGASA 70
M +LK + R++SVK+ +KIT++M+MV+AAK RA+ + ++P G AS
Sbjct: 1 MPSLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASV 60
Query: 71 FYSKAEVTTPEGTESPK-ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
S + GT S K +LLI +TS+RGLCG +T++A+ R +LQ +G V ++T
Sbjct: 61 GGSDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILT 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKF 182
+G K R L+R G+ I + + +++DA +A++ ++++ F I Y KF
Sbjct: 121 VGKKGRDQLKRDLGSLFIGHVDLTEIKRVSYVDAQGIAKDVLNRFDVGEFDVATIFYAKF 180
Query: 183 KSVVS 187
+VVS
Sbjct: 181 VNVVS 185
>sp|B2ICI6|ATPG_BEII9 ATP synthase gamma chain OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=atpG PE=3
SV=1
Length = 293
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFT 291
EG KV ++ +G K +L+R +G I+ R F++A + ++ F
Sbjct: 112 EGKKVKILCVGKKGYDLLKRQFGEQILELIELRSVRTIGFVNAEAIGRKILNLYKDAEFD 171
Query: 292 SGKIIYNKFKSVVSYTTSDLPIFSLASVT------AAPKLGVYDSLDADVIQSYLEFSMA 345
+ + KF++V+ + + LA T A P L Y+ + ++ + L ++
Sbjct: 172 VCTLFFAKFRTVLHQIPTAQQLIPLAVKTQEDAPAAPPSLYEYEPSEEQILATLLPRNIT 231
Query: 346 AMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGAS 405
+ A+ E A SEQ +RM++MDNAS+NAGEMI+K TL +NR+RQA+IT+ELIEIISGA
Sbjct: 232 IQVLRALLENAASEQGARMSAMDNASRNAGEMIKKQTLKYNRSRQAMITKELIEIISGAE 291
Query: 406 AL 407
AL
Sbjct: 292 AL 293
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 54/314 (17%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVK QKIT++M+MV++AK RA+ +AA+P +
Sbjct: 1 MPSLKDLRNRIASVKATQKITKAMQMVASAKLRRAQLAAEAARPYAERMDEVLASLASIV 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIRN---ELQTKGDKVLVIT 126
G ++PK LL+ T++RGLCG + S+AR R+ +L +G KV ++
Sbjct: 61 GTGPDAPKLLAGNGYDRTHLLVVCTAERGLCGGFNASIARLARDTAEKLIAEGKKVKILC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFTSGKIIYNKF 182
+G K +L+R +G I+ R F++A + ++ F + + KF
Sbjct: 121 VGKKGYDLLKRQFGEQILELIELRSVRTIGFVNAEAIGRKILNLYKDAEFDVCTLFFAKF 180
Query: 183 KSVVSYTTSDLPIFSLASVT------AAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKE 236
++V+ + + LA T A P L Y+ + ++ + L ++ + A+ E
Sbjct: 181 RTVLHQIPTAQQLIPLAVKTQEDAPAAPPSLYEYEPSEEQILATLLPRNITIQVLRALLE 240
Query: 237 GDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASK-----VAQETSKYNFT 291
AA+E G R +AS+ + ++T KYN +
Sbjct: 241 N--------------------------AASEQGARMSAMDNASRNAGEMIKKQTLKYNRS 274
Query: 292 SGKIIYNKFKSVVS 305
+I + ++S
Sbjct: 275 RQAMITKELIEIIS 288
>sp|Q5LNP0|ATPG_RUEPO ATP synthase gamma chain OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=atpG PE=3 SV=1
Length = 291
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 105/182 (57%), Gaps = 8/182 (4%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN--- 289
+ +G V ++T+G K R ++R + N++ + G + + +A +A++ +++
Sbjct: 110 LAKGKTVKILTVGKKGRDAMKRDFAANMVGHVDLSGIKALGYANAQDIARDVLGRFDAGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPI----FSLASVTAAPKLGVYDSLDADVIQSYLEFSMA 345
F I Y KF++VV+ + I F + L Y+ + ++ L +A
Sbjct: 170 FDVATIFYAKFQNVVTQLPTAQQIIPAAFEAEGESDEVALFDYEPSEEAILADLLPRGVA 229
Query: 346 AMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGAS 405
++ A+ E SEQ +RM++MDNA++NAGEMI+KLT+ FNR+RQAVIT ELIEIISGA
Sbjct: 230 TQIFSALLENGASEQGARMSAMDNATRNAGEMIDKLTIEFNRSRQAVITNELIEIISGAE 289
Query: 406 AL 407
AL
Sbjct: 290 AL 291
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 103/185 (55%), Gaps = 17/185 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP---------IGAGASA 70
M LK + R+ SVK+ +KIT++M+MV+AAK RA+ +AA+P G AS
Sbjct: 1 MPNLKDLKNRIASVKSTRKITKAMQMVAAAKLRRAQESAEAARPYAERFNAVMAGLAASV 60
Query: 71 FYSKAEVTTPEGTESPK-ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
S + GT S + LL+ +T++RGLCG ++++A+ R NEL KG V ++T
Sbjct: 61 GGSDSAPLLLRGTGSDQVHLLVVMTAERGLCGGFNSNIAKLARVRANELLAKGKTVKILT 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKF 182
+G K R ++R + N++ + G + + +A +A++ +++ F I Y KF
Sbjct: 121 VGKKGRDAMKRDFAANMVGHVDLSGIKALGYANAQDIARDVLGRFDAGEFDVATIFYAKF 180
Query: 183 KSVVS 187
++VV+
Sbjct: 181 QNVVT 185
>sp|A9W2R2|ATPG_METEP ATP synthase gamma chain OS=Methylobacterium extorquens (strain
PA1) GN=atpG PE=3 SV=1
Length = 296
Score = 108 bits (270), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 114/187 (60%), Gaps = 13/187 (6%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN--- 289
M +G V +ITIG K +L+R + + II + + G +P + A+++A + +++
Sbjct: 110 MADGKTVKIITIGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGE 169
Query: 290 FTSGKIIYNKFKSVVS-------YTTSDLPIFSLASVTAAPKLGV--YDSLDADVIQSYL 340
F + Y++F+SV+S ++LP A+ T A ++ + ++++ L
Sbjct: 170 FDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGAAATGAGSDAAMEFEPNEETILETLL 229
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
++ ++ A+ E A SEQ +RM++MD+A++NAGEMI+K TL +NRTRQA+IT+ELIEI
Sbjct: 230 PKNLTVQIFRALLENAASEQGARMSAMDSATRNAGEMIKKQTLIYNRTRQAMITKELIEI 289
Query: 401 ISGASAL 407
ISGA AL
Sbjct: 290 ISGAEAL 296
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 96/185 (51%), Gaps = 17/185 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVK QKIT++M+MV+AAK RA+ + +P +
Sbjct: 1 MPSLKDLRNRITSVKATQKITKAMQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNL 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
G +P+ LL+ T DRGL GA ++S+AR R N L G V +IT
Sbjct: 61 IGGVGAPRLLTGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIIT 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKY---NFTSGKIIYNKF 182
IG K +L+R + + II + + G +P + A+++A + +++ F + Y++F
Sbjct: 121 IGKKGLDVLRRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEF 180
Query: 183 KSVVS 187
+SV+S
Sbjct: 181 RSVIS 185
>sp|Q28TJ7|ATPG_JANSC ATP synthase gamma chain OS=Jannaschia sp. (strain CCS1) GN=atpG
PE=3 SV=1
Length = 296
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 105/187 (56%), Gaps = 13/187 (6%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYN 289
+ EG + ++T+G K R L+R Y +++I + + + DA+ +A + +
Sbjct: 110 LGEGKTIKILTVGKKGREQLRRDYADHLIGHVDLSDVKRLGYADAASIATDVLNRFEEDE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFS--LASVTAAPK-------LGVYDSLDADVIQSYL 340
F I +N+F+SV+S + I V A L Y+ + V++ L
Sbjct: 170 FDVATIFFNRFESVISQIPTATQIIPAVFEDVEEADDTSKDSGTLYEYEPSEEAVLEDLL 229
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
+A ++ A+ E SEQ +RM++MDNA++NAG+MI++LT+ +NR+RQAVIT ELIEI
Sbjct: 230 PRGIATQIFTALLENGASEQGARMSAMDNATRNAGDMIDRLTIEYNRSRQAVITSELIEI 289
Query: 401 ISGASAL 407
ISGA AL
Sbjct: 290 ISGAEAL 296
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 99/187 (52%), Gaps = 21/187 (11%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYS--KAEV 77
M LK + R+ SVK+ +KIT++M+MV+AAK RA+ + A+P A S + V
Sbjct: 1 MPNLKDLKNRIASVKSTRKITKAMQMVAAAKLRRAQEAAEMARPYAEKMEAVMSGLASAV 60
Query: 78 TTPEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLV 124
EG +P+ LL+ +T++RGLCG ++++ R R +L +G + +
Sbjct: 61 GNSEG--APRLLAGNGKDQVHLLVVMTAERGLCGGFNSTIVRKARVHAQKLLGEGKTIKI 118
Query: 125 ITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFTSGKIIYN 180
+T+G K R L+R Y +++I + + + DA+ +A + + F I +N
Sbjct: 119 LTVGKKGREQLRRDYADHLIGHVDLSDVKRLGYADAASIATDVLNRFEEDEFDVATIFFN 178
Query: 181 KFKSVVS 187
+F+SV+S
Sbjct: 179 RFESVIS 185
>sp|P07227|ATPG_RHORU ATP synthase gamma chain OS=Rhodospirillum rubrum GN=atpG PE=3 SV=1
Length = 299
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 20/190 (10%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYN 289
+G V ++ IG K R L+R + II + + F DA + ++ + +++
Sbjct: 112 QGKTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFD 171
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFSLA-----------SVTAAPK-LGVYDSLDADVIQ 337
+ ++YN+F+S +S + I A TA PK + Y+ + +++
Sbjct: 172 VCT--LVYNRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEEEILA 229
Query: 338 SYLEFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITREL 397
L ++A ++ M E SEQ +RMT+MDNA++NAG+MI+KL+LT+NRTRQA IT+EL
Sbjct: 230 DLLPKNVAIQVFRGMLESFASEQGARMTAMDNATRNAGDMIKKLSLTYNRTRQAQITKEL 289
Query: 398 IEIISGASAL 407
IEIISGA A+
Sbjct: 290 IEIISGAEAI 299
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 122/249 (48%), Gaps = 35/249 (14%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP-----------IGAGA 68
MA+LK + R+ SVK+ QKIT +MKMV+A++ RA+ +AA+P + A
Sbjct: 1 MASLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAAST 60
Query: 69 SAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVI 125
+ + + G ++ L++A+T++RGLCG + S+ R R EL+ +G V ++
Sbjct: 61 AGMAGASPLLGGTGKDNV-HLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLL 119
Query: 126 TIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYNFTSGKIIY 179
IG K R L+R + II + + F DA + ++ + +++ + ++Y
Sbjct: 120 CIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCT--LVY 177
Query: 180 NKFKSVVSYTTSDLPIFSLA-----------SVTAAPK-LGVYDSLDADVIQSYLEFSMA 227
N+F+S +S + I A TA PK + Y+ + +++ L ++A
Sbjct: 178 NRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEEEILADLLPKNVA 237
Query: 228 AMLYYAMKE 236
++ M E
Sbjct: 238 IQVFRGMLE 246
>sp|Q2RV19|ATPG_RHORT ATP synthase gamma chain OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=atpG PE=3 SV=1
Length = 299
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 107/190 (56%), Gaps = 20/190 (10%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYN 289
+G V ++ IG K R L+R + II + + F DA + ++ + +++
Sbjct: 112 QGKTVKLLCIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFD 171
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFSLA-----------SVTAAPK-LGVYDSLDADVIQ 337
+ ++YN+F+S +S + I A TA PK + Y+ + +++
Sbjct: 172 VCT--LVYNRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEEEILA 229
Query: 338 SYLEFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITREL 397
L ++A ++ M E SEQ +RMT+MDNA++NAG+MI+KL+LT+NRTRQA IT+EL
Sbjct: 230 DLLPKNVAIQVFRGMLESFASEQGARMTAMDNATRNAGDMIKKLSLTYNRTRQAQITKEL 289
Query: 398 IEIISGASAL 407
IEIISGA A+
Sbjct: 290 IEIISGAEAI 299
Score = 85.1 bits (209), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 122/249 (48%), Gaps = 35/249 (14%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP-----------IGAGA 68
MA+LK + R+ SVK+ QKIT +MKMV+A++ RA+ +AA+P + A
Sbjct: 1 MASLKDLRSRITSVKSTQKITSAMKMVAASRLRRAQDTAEAARPYTQRMERMLGNLAAST 60
Query: 69 SAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVI 125
+ + + G ++ L++A+T++RGLCG + S+ R R EL+ +G V ++
Sbjct: 61 AGMAGASPLLGGTGKDNV-HLIVALTANRGLCGGFNGSIIRATRTLVRELEAQGKTVKLL 119
Query: 126 TIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYNFTSGKIIY 179
IG K R L+R + II + + F DA + ++ + +++ + ++Y
Sbjct: 120 CIGKKGRDGLKREFPKQIIGGIADQSSKAIGFSDADRFSRLILDMFQAGEFDVCT--LVY 177
Query: 180 NKFKSVVSYTTSDLPIFSLA-----------SVTAAPK-LGVYDSLDADVIQSYLEFSMA 227
N+F+S +S + I A TA PK + Y+ + +++ L ++A
Sbjct: 178 NRFQSAISQVVTRQQIIPFAVPTTVAAGNDNDRTAGPKAIYEYEPSEEEILADLLPKNVA 237
Query: 228 AMLYYAMKE 236
++ M E
Sbjct: 238 IQVFRGMLE 246
>sp|P05436|ATPG_RHOBL ATP synthase gamma chain OS=Rhodopseudomonas blastica GN=atpG PE=3
SV=1
Length = 286
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 105/179 (58%), Gaps = 9/179 (5%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGK- 294
+G V ++T+G K R L+R + + + + R + +A +A+E F +G+
Sbjct: 110 QGKTVKILTVGKKGREQLKRDWASAFVGHVDLSDVRRLGYSNAQGIAREVLAA-FEAGEA 168
Query: 295 ----IIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDAD--VIQSYLEFSMAAML 348
I YN+F+SV+S + + A AA +YD ++ ++ L +A +
Sbjct: 169 DVVTIFYNRFQSVISQVPTAQQVIP-AKFEAAETNALYDYEPSEEAILADLLPRGVATQI 227
Query: 349 YYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
+ A+ E A SEQ +RM++MDNA++NAG+MI KLT+ +NR+RQA IT+ELIEIISGA AL
Sbjct: 228 FTALLENAASEQGARMSAMDNATRNAGDMINKLTIQYNRSRQAAITKELIEIISGAEAL 286
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 110/210 (52%), Gaps = 22/210 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVKN +KIT++M+MV+AAK RA+ +AA+P A A + +
Sbjct: 1 MPSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQDSAEAARPYAERMGAVI--ASLAS 58
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
+G +P+ LL+ +TS+RGLCG ++++ R R NEL +G V ++T
Sbjct: 59 GQGAGAPRLLAGNGRDQIHLLVVMTSERGLCGGFNSTIVRLARQRANELVAQGKTVKILT 118
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGK-----IIYNK 181
+G K R L+R + + + + R + +A +A+E F +G+ I YN+
Sbjct: 119 VGKKGREQLKRDWASAFVGHVDLSDVRRLGYSNAQGIAREVLAA-FEAGEADVVTIFYNR 177
Query: 182 FKSVVSYTTSDLPIFSLASVTAAPKLGVYD 211
F+SV+S + + A AA +YD
Sbjct: 178 FQSVISQVPTAQQVIP-AKFEAAETNALYD 206
>sp|B0UE40|ATPG_METS4 ATP synthase gamma chain OS=Methylobacterium sp. (strain 4-46)
GN=atpG PE=3 SV=1
Length = 292
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 106/185 (57%), Gaps = 17/185 (9%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYN 289
EG V +I +G K IL+R + + I+ G R F +A +AQ E +++
Sbjct: 112 EGRTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFDNAETIAQNLLGRFEAGEFD 171
Query: 290 FTSGKIIYNKFKSVV-------SYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEF 342
+ + Y++F+SV+ +++P A+ T A Y+ + +++ + L
Sbjct: 172 IAT--LFYSRFRSVIVQIPTAQQIIPAEIPPAGEAAQTDAAY--EYEPDEGEILAALLPK 227
Query: 343 SMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIIS 402
++ + A+ E A SEQ +RM++MDNA++NAGEMI+K TL +NRTRQA IT+ELIEIIS
Sbjct: 228 NLTVQILRALLENAASEQGARMSAMDNATRNAGEMIKKQTLVYNRTRQAQITKELIEIIS 287
Query: 403 GASAL 407
GA AL
Sbjct: 288 GAEAL 292
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 21/186 (11%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVK QKIT++M+MV+AAK RA+ + A+P +A
Sbjct: 1 MPSLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNL 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
G E+P+ LL+ T++RGLCGA ++S+AR R+ L +G V +I
Sbjct: 61 TPGAETPRLLSGTGADRVHLLLVCTAERGLCGAFNSSIARLARDHARRLTAEGRTVKIIC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYNFTSGKIIYN 180
+G K IL+R + + I+ G R F +A +AQ E +++ + + Y+
Sbjct: 121 VGKKGYDILRREFRDQIVELIELRGVRQLGFDNAETIAQNLLGRFEAGEFDIAT--LFYS 178
Query: 181 KFKSVV 186
+F+SV+
Sbjct: 179 RFRSVI 184
>sp|B8IN02|ATPG_METNO ATP synthase gamma chain OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=atpG PE=3 SV=1
Length = 292
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 105/182 (57%), Gaps = 11/182 (6%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGK- 294
EG V +I +G K IL+R + + I+ G R F +A V E F +G+
Sbjct: 112 EGKTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVT-ENLLNRFEAGEF 170
Query: 295 ----IIYNKFKSVVSYTTSDLPIF----SLASVTAAPKLGV-YDSLDADVIQSYLEFSMA 345
+ Y++F+SV++ + I S AS +A Y+ + +++ + L ++
Sbjct: 171 DIATLFYSRFRSVIAQVPTAQQIIPAEISPASESAQTDAAYEYEPEEGEILAALLPKNLT 230
Query: 346 AMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGAS 405
+ A+ E A SEQ +RM++MD+A++NAGEMI+K TL +NRTRQA+IT+ELIEIISGA
Sbjct: 231 VQILRALLENAASEQGARMSAMDSATRNAGEMIKKQTLVYNRTRQAMITKELIEIISGAE 290
Query: 406 AL 407
AL
Sbjct: 291 AL 292
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 141/309 (45%), Gaps = 45/309 (14%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
MA+LK + R+ SVK QKIT++M+MV+AAK RA+ + A+P +A
Sbjct: 1 MASLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNL 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
G E+P+ LL+ T++RGLCGA ++S+AR R+ L +G V +I
Sbjct: 61 TPGAETPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLARDHARRLVAEGKTVKIIC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKYNFTSGK-----IIYNK 181
+G K IL+R + + I+ G R F +A V E F +G+ + Y++
Sbjct: 121 VGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVT-ENLLNRFEAGEFDIATLFYSR 179
Query: 182 FKSVVSYTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYYAMKEGDKVL 241
F+SV++ + I A ++ A + D A Y +EG+ +
Sbjct: 180 FRSVIAQVPTAQQIIP-AEISPASESAQTD----------------AAYEYEPEEGEILA 222
Query: 242 VITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSK-----YNFTSGKII 296
+ + + IL+ L N AA+E G R A++ A E K YN T +I
Sbjct: 223 ALLPKNLTVQILRALLEN----AASEQGARMSAMDSATRNAGEMIKKQTLVYNRTRQAMI 278
Query: 297 YNKFKSVVS 305
+ ++S
Sbjct: 279 TKELIEIIS 287
>sp|A9H9A6|ATPG_GLUDA ATP synthase gamma chain OS=Gluconacetobacter diazotrophicus
(strain ATCC 49037 / DSM 5601 / PAl5) GN=atpG PE=3 SV=1
Length = 293
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 103/182 (56%), Gaps = 10/182 (5%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETS----KYNFT 291
EG + ++ G K L R + + I+ + G + F A+++ + + K F
Sbjct: 112 EGKTIRLLPTGRKGYEFLMREFSDLIVDHVHGSGGKEVPFSAAAELGERLTAMLEKGEFD 171
Query: 292 SGKIIYNKFKSVVSYTTSDLPIFSLA-----SVTAAPKLGV-YDSLDADVIQSYLEFSMA 345
++YN+F +V+S T +++ + LA +V + + ++ + ++ S L ++
Sbjct: 172 VCTVVYNRFNNVMSQTPTEMQLIPLAVPANDTVASGERASYEFEPGEEQLLSSLLPRNLQ 231
Query: 346 AMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGAS 405
LY M E A EQ +RMT+MDNA++NAG+ I++LTLT+NRTRQ IT ELIEIISGA
Sbjct: 232 VQLYATMLESAAGEQGARMTAMDNATRNAGKAIDRLTLTYNRTRQTNITNELIEIISGAQ 291
Query: 406 AL 407
A+
Sbjct: 292 AV 293
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 123/243 (50%), Gaps = 29/243 (11%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGA---------GASA 70
MA+LK + R+ SVK+ +KIT +MKMV+AAK RA+ +AA+P A GAS
Sbjct: 1 MASLKDLRARIGSVKSTRKITSAMKMVAAAKLRRAQGRAEAARPYAAAMRRMLAELGASV 60
Query: 71 FYSKAEVTTPE---GTESPK-ELLIAVTSDRGLCGAVHTSVARWIRN---ELQTKGDKVL 123
+ E P+ GT K LLI +TSDRGL GA + ++ R R+ LQ +G +
Sbjct: 61 ---RNEAGLPQLLAGTGKDKVHLLIPMTSDRGLAGAFNANINRTTRDLIRRLQAEGKTIR 117
Query: 124 VITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETS----KYNFTSGKIIY 179
++ G K L R + + I+ + G + F A+++ + + K F ++Y
Sbjct: 118 LLPTGRKGYEFLMREFSDLIVDHVHGSGGKEVPFSAAAELGERLTAMLEKGEFDVCTVVY 177
Query: 180 NKFKSVVSYTTSDLPIFSLA-----SVTAAPKLGV-YDSLDADVIQSYLEFSMAAMLYYA 233
N+F +V+S T +++ + LA +V + + ++ + ++ S L ++ LY
Sbjct: 178 NRFNNVMSQTPTEMQLIPLAVPANDTVASGERASYEFEPGEEQLLSSLLPRNLQVQLYAT 237
Query: 234 MKE 236
M E
Sbjct: 238 MLE 240
>sp|A8LJR5|ATPG_DINSH ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12)
GN=atpG PE=3 SV=1
Length = 290
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNII--LAANEVGRRPPTFLDASKVAQET-SKYN--- 289
+G V ++T+G K R L+R + I + +EV R ++ +A+ +A + +++
Sbjct: 112 QGKTVKILTVGKKGREQLKRDLSKHFIGHVDLSEVKR--VSYDNAADIAADVLGRFDAGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSD---LPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAA 346
F I +N+F+SV+S + +P A L Y+ + ++ L +A
Sbjct: 170 FDVATIFFNRFQSVISQIPTAQQIIPASFEGDADADATLYDYEPSEEAILADLLPRGVAT 229
Query: 347 MLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASA 406
++ A+ E SEQ +RM++MDNA++NAG+MIE+LT+ +NR+RQAVIT ELIEIISGA A
Sbjct: 230 QIFAALLENGASEQGARMSAMDNATRNAGDMIERLTIEYNRSRQAVITNELIEIISGAEA 289
Query: 407 L 407
L
Sbjct: 290 L 290
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 105/187 (56%), Gaps = 21/187 (11%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP---------IGAGASA 70
M LK + R++SVK+ +KIT++M+MV+AAK RA+ +A++P G AS
Sbjct: 1 MPNLKDLKNRIESVKSTRKITKAMQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASV 60
Query: 71 FYSKAEVTTPEGTESPK-ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
S + GT S + LL+ +T++RGLCG ++S+A+ R +L +G V ++T
Sbjct: 61 GDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILT 120
Query: 127 IGDKSRAILQRLYGNNII--LAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYN 180
+G K R L+R + I + +EV R ++ +A+ +A + +++ F I +N
Sbjct: 121 VGKKGREQLKRDLSKHFIGHVDLSEVKR--VSYDNAADIAADVLGRFDAGEFDVATIFFN 178
Query: 181 KFKSVVS 187
+F+SV+S
Sbjct: 179 RFQSVIS 185
>sp|Q11DD6|ATPG_MESSB ATP synthase gamma chain OS=Mesorhizobium sp. (strain BNC1) GN=atpG
PE=3 SV=1
Length = 290
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 107/182 (58%), Gaps = 14/182 (7%)
Query: 237 GDKVLVITIGDKSRAILQRLYGNNII--LAANEVGRRPPTFLDASKVAQETSKYNFTSGK 294
G +V +IT+G K +L+R +G +I + EV + F +A +A++ F +G+
Sbjct: 112 GRQVKIITVGKKGYDLLRRDFGKLVIDRIELREV--KQIGFANADAIAKKVIGL-FEAGE 168
Query: 295 -----IIYNKFKSVVSYTTSDLPIFSLASVTAAPK----LGVYDSLDADVIQSYLEFSMA 345
+IY++FKSV+S ++ I A A + + Y+ ++ + ++A
Sbjct: 169 FDVCTLIYSRFKSVISQIPTEQQIIPAAVPQAEGESTGAIYEYEPDAGAILADLIPRNIA 228
Query: 346 AMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGAS 405
++ A+ E A E ++MT+MDNA++NAGEMI KLT+T+NR RQA IT+ELIEIISGA
Sbjct: 229 VQIFRALLENAAGEMGAKMTAMDNATRNAGEMINKLTITYNRQRQAQITKELIEIISGAE 288
Query: 406 AL 407
AL
Sbjct: 289 AL 290
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 24/200 (12%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVK QKIT++M+MV+AAK RA+ +AA+P A + +
Sbjct: 1 MPSLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYAERMDAVLANVSASI 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
G ++P L++ T+DRGL G+ ++ +AR R LQ G +V +IT
Sbjct: 61 -SGADAPPLMAGTGKDDVHLVVVCTADRGLAGSFNSQIARLAREHIRKLQANGRQVKIIT 119
Query: 127 IGDKSRAILQRLYGNNII--LAANEVGRRPPTFLDASKVAQETSKYNFTSGK-----IIY 179
+G K +L+R +G +I + EV + F +A +A++ F +G+ +IY
Sbjct: 120 VGKKGYDLLRRDFGKLVIDRIELREV--KQIGFANADAIAKKVIGL-FEAGEFDVCTLIY 176
Query: 180 NKFKSVVSYTTSDLPIFSLA 199
++FKSV+S ++ I A
Sbjct: 177 SRFKSVISQIPTEQQIIPAA 196
>sp|A7HT51|ATPG_PARL1 ATP synthase gamma chain OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=atpG PE=3 SV=1
Length = 294
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 107/185 (57%), Gaps = 15/185 (8%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYN 289
EG V ++T+G K R L+R + + I+ + G R F A +++ E +++
Sbjct: 112 EGKTVKILTVGRKGRDALKRDHASRIVKSYEFTGIRHIGFEQAEDISRTVIDLFEAGEFD 171
Query: 290 FTSGKIIYNKFKSVVS-------YTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEF 342
+ I Y+KF +VVS + +P + SV + Y+ + ++++ L
Sbjct: 172 VAT--IFYSKFVNVVSQIPTAQQLIPASVPADAGGSVDLGGAVYEYEPDEGEILKDILPR 229
Query: 343 SMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIIS 402
+++ ++ A+ E E ++M++MDNA++NAG+MI+KL +T+NR+RQA+IT+ELIEIIS
Sbjct: 230 NLSVQIFRALLENVAGEFGAKMSAMDNATRNAGDMIKKLNITYNRSRQAMITKELIEIIS 289
Query: 403 GASAL 407
GA AL
Sbjct: 290 GAEAL 294
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 119/244 (48%), Gaps = 30/244 (12%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTR-----------AERELKAAKPIGAGA 68
MA+LK + R+ SVK QKIT++M+MV+AAK R AER + + G
Sbjct: 1 MASLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYAERMDRVLANLATGM 60
Query: 69 SAFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVI 125
+ + G++ L+I T+DRGLCG ++S+ R R N+L +G V ++
Sbjct: 61 TGRSDAPALLAGTGSDQV-HLVIVATADRGLCGGFNSSIVRLARQHINKLVGEGKTVKIL 119
Query: 126 TIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQ------ETSKYNFTSGKIIY 179
T+G K R L+R + + I+ + G R F A +++ E +++ + I Y
Sbjct: 120 TVGRKGRDALKRDHASRIVKSYEFTGIRHIGFEQAEDISRTVIDLFEAGEFDVAT--IFY 177
Query: 180 NKFKSVVS-------YTTSDLPIFSLASVTAAPKLGVYDSLDADVIQSYLEFSMAAMLYY 232
+KF +VVS + +P + SV + Y+ + ++++ L +++ ++
Sbjct: 178 SKFVNVVSQIPTAQQLIPASVPADAGGSVDLGGAVYEYEPDEGEILKDILPRNLSVQIFR 237
Query: 233 AMKE 236
A+ E
Sbjct: 238 ALLE 241
>sp|Q13DP3|ATPG_RHOPS ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain
BisB5) GN=atpG PE=3 SV=1
Length = 291
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 104/187 (55%), Gaps = 12/187 (6%)
Query: 231 YYAMKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN 289
Y M +G V +G K L+R + II R F++A +AQ+ +++N
Sbjct: 107 YALMNQGKTVKFFCVGRKGYEQLRRTFDKQIIENIELRSVRQLGFVNAEDIAQKVIARFN 166
Query: 290 ---FTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYL 340
F + Y++FKSV+S + + L V AP G Y+ + +++ + L
Sbjct: 167 NGEFDVCTLFYSRFKSVISQIPTAQQLIPL--VVEAPAAGSVATSYEYEPEEDEILSTLL 224
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
++A ++ A+ E S ++M++MDNA++NAG+MI K TL +NRTRQA+IT+ELIEI
Sbjct: 225 PRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEI 284
Query: 401 ISGASAL 407
ISGA A+
Sbjct: 285 ISGAEAI 291
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 115/242 (47%), Gaps = 25/242 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
MA+LK + +R+ S K QKIT++M+MV+A+K RA+ +AA+P A S
Sbjct: 1 MASLKDMRVRIASTKATQKITKAMQMVAASKLRRAQMAAEAARPYAEKMDAVISNIAGAA 60
Query: 80 PE---------GTESPK-ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
GT + LL+ T +RGL GA ++S+ R R L +G V
Sbjct: 61 AGSPGAPVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERAYALMNQGKTVKFFC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKF 182
+G K L+R + II R F++A +AQ+ +++N F + Y++F
Sbjct: 121 VGRKGYEQLRRTFDKQIIENIELRSVRQLGFVNAEDIAQKVIARFNNGEFDVCTLFYSRF 180
Query: 183 KSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYLEFSMAAMLYYAMKE 236
KSV+S + + L V AP G Y+ + +++ + L ++A ++ A+ E
Sbjct: 181 KSVISQIPTAQQLIPL--VVEAPAAGSVATSYEYEPEEDEILSTLLPRNLAVQIFRALLE 238
Query: 237 GD 238
+
Sbjct: 239 NN 240
>sp|A4WUM8|ATPG_RHOS5 ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=atpG PE=3 SV=1
Length = 289
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNII--LAANEVGRR--PPTFLDASKVAQETSKYN 289
+ EG V ++T+G K R L+R G + I + +EV R P A V K
Sbjct: 110 LAEGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDVLDRFDKGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFS--LASVTAAPKLGVYDSLDADVIQSYLEFSMAAM 347
F I + +F+SV+S + + L Y+ + V+ L +A
Sbjct: 170 FDVATIFFARFQSVISQIPTAQQVIPAVFEGEGEVNSLYDYEPSEEGVLADLLPRGVATQ 229
Query: 348 LYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
++ A+ E SEQ +RM++MDNA++NAG+MI +LT+ +NR+RQA IT+ELIEIISGA AL
Sbjct: 230 IFTALLENGASEQGARMSAMDNATRNAGDMINRLTIQYNRSRQAAITKELIEIISGAEAL 289
Score = 75.5 bits (184), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPI---------GAGASA 70
M +LK + R+ SVKN +KIT++M+MV+AAK RA+ +AA+P G S
Sbjct: 1 MPSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSV 60
Query: 71 FYSKAEVTTPEGTESPK-ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
S++ GT S K +LL+ +T++RGLCG ++S+ R R L +G V ++T
Sbjct: 61 GSSESAPRLLAGTGSDKVQLLVVMTAERGLCGGFNSSIVRLARAHAAKLLAEGKTVKILT 120
Query: 127 IGDKSRAILQRLYGNNII--LAANEVGRR--PPTFLDASKVAQETSKYNFTSGKIIYNKF 182
+G K R L+R G + I + +EV R P A V K F I + +F
Sbjct: 121 VGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDVLDRFDKGEFDVATIFFARF 180
Query: 183 KSVVS 187
+SV+S
Sbjct: 181 QSVIS 185
>sp|Q1GQS6|ATPG_SPHAL ATP synthase gamma chain OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=atpG PE=3 SV=1
Length = 291
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 97/180 (53%), Gaps = 8/180 (4%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKY----NFT 291
+G KVL +G K R ++ RL+ II + G R F AS+++ + F
Sbjct: 112 QGKKVLFYLVGRKGRPVIARLFPGQIIEQYDTTGIRDIGFDQASEISARVMELYEAGAFD 171
Query: 292 SGKIIYNKFKS-VVSYTTSDLPIFSLASVTAAPKLGV---YDSLDADVIQSYLEFSMAAM 347
+ Y+KF+S ++ T I A G Y+ + +++ L ++
Sbjct: 172 VAHLFYSKFRSALLQIATGQQMIPVPPPAEAPASSGAAVEYEPGEEEILADLLPRNVTIQ 231
Query: 348 LYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
++ + E A SEQ + MT+MDNA++NAGE+I KLT+ +NRTRQA IT ELIEII+GA AL
Sbjct: 232 IFKGLLENAASEQGASMTAMDNATRNAGELINKLTIIYNRTRQAAITTELIEIIAGAEAL 291
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 103/184 (55%), Gaps = 17/184 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKP----IGAGASAFYSK- 74
MA+LK + R+ SVK+ QKIT++ KMV+AAK +A+ +AA+P + ++ SK
Sbjct: 1 MASLKELKGRIVSVKSTQKITKAKKMVAAAKLRKAQAAAEAARPYAERLEGVVASLASKV 60
Query: 75 -AEVTTPE---GT-ESPKELLIAVTSDRGLCGAVHTSVARWIRN---ELQTKGDKVLVIT 126
A + P+ GT +S LL+ + SDRGL GA ++++ + R+ ELQ++G KVL
Sbjct: 61 GASDSAPKLLSGTGKSDTHLLVVLNSDRGLAGAFNSNIVKAARDKALELQSQGKKVLFYL 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQETSKY----NFTSGKIIYNKF 182
+G K R ++ RL+ II + G R F AS+++ + F + Y+KF
Sbjct: 121 VGRKGRPVIARLFPGQIIEQYDTTGIRDIGFDQASEISARVMELYEAGAFDVAHLFYSKF 180
Query: 183 KSVV 186
+S +
Sbjct: 181 RSAL 184
>sp|Q8UC75|ATPG_AGRT5 ATP synthase gamma chain OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=atpG PE=3 SV=1
Length = 292
Score = 102 bits (253), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 107/184 (58%), Gaps = 10/184 (5%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN--- 289
+ EG V +IT+G K L+R + + II + F +A ++A++ S +N
Sbjct: 109 ISEGKTVKIITVGKKGYDSLRREFASLIIERIELRDVKKVGFENADQIAKKVISLFNAGE 168
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFSLAS--VTAAPKLGV----YDSLDADVIQSYLEFS 343
F +IY++FKSV+S + L + A+ V AA Y+ A +++ + +
Sbjct: 169 FDVCTLIYSEFKSVISQIPTGLQLIPAATPVVEAAETTQTAVYEYEPDAASILEDLIPRN 228
Query: 344 MAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISG 403
++ ++ A+ E E ++M++MDNA++NAGEMI KLTL++NR RQA IT+ELIEIISG
Sbjct: 229 ISVQVFRALLENVAGEMGAKMSAMDNATRNAGEMINKLTLSYNRQRQAQITKELIEIISG 288
Query: 404 ASAL 407
A AL
Sbjct: 289 AEAL 292
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 110/197 (55%), Gaps = 16/197 (8%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYS------ 73
M +LK + R+ SVK QKIT++MKMV+AAK RA+ +AA+P SA +
Sbjct: 1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMSAVLANIATAV 60
Query: 74 KAEVTTPEGTESPKE---LLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVITI 127
+A+V T + K+ LL+ T++RGLCG ++ +AR+ R++ L ++G V +IT+
Sbjct: 61 EADVAPALMTGTGKDDVHLLVVCTAERGLCGGFNSQIARFARDQARKLISEGKTVKIITV 120
Query: 128 GDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKFK 183
G K L+R + + II + F +A ++A++ S +N F +IY++FK
Sbjct: 121 GKKGYDSLRREFASLIIERIELRDVKKVGFENADQIAKKVISLFNAGEFDVCTLIYSEFK 180
Query: 184 SVVSYTTSDLPIFSLAS 200
SV+S + L + A+
Sbjct: 181 SVISQIPTGLQLIPAAT 197
>sp|Q0C0Z9|ATPG_HYPNA ATP synthase gamma chain OS=Hyphomonas neptunium (strain ATCC
15444) GN=atpG PE=3 SV=1
Length = 292
Score = 101 bits (252), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 103/184 (55%), Gaps = 13/184 (7%)
Query: 236 EGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDAS-KVAQETSKYNFTSGK 294
EG V V+TIG K R +L R + N + F DAS V Q +K F +G+
Sbjct: 110 EGKTVKVLTIGKKGREVLAREHSALFTGHVNLSDVKSNNFTDASLSVGQMLTK-GFENGE 168
Query: 295 -----IIYNKFKSVVSYTTSDLPIFSLASVTAAP--KLG----VYDSLDADVIQSYLEFS 343
+IY++FK+V+S + + + AP LG +Y+ + ++++ L
Sbjct: 169 FDVATLIYSQFKNVLSQVPTAQQLIPATAPEGAPVIDLGGAQYIYEPSEEALLEALLPRY 228
Query: 344 MAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISG 403
+ + AM E + EQ+SRMT+MDNA++NA ++I+ L L +NR RQA IT+ELIEIISG
Sbjct: 229 INTQILSAMLESSAGEQASRMTAMDNATRNAKDLIKALNLKYNRARQAQITKELIEIISG 288
Query: 404 ASAL 407
A AL
Sbjct: 289 AEAL 292
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 121/242 (50%), Gaps = 28/242 (11%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
M +LK + R+ SVK+ QKIT++M++V+AAK RA+ AA+P +A + TT
Sbjct: 1 MPSLKDLKNRIGSVKSTQKITKAMQLVAAAKLKRAQEAATAARPYAERLAAVLANLAATT 60
Query: 80 PEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIR---NELQTKGDKVLVIT 126
+G PK LL+ +T++RGL G + VA+ R +LQ++G V V+T
Sbjct: 61 GQG--GPKLLTGNGTDQTHLLVVMTAERGLAGGFNAYVAKLARLKIQQLQSEGKTVKVLT 118
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDAS-KVAQETSKYNFTSGK-----IIYN 180
IG K R +L R + N + F DAS V Q +K F +G+ +IY+
Sbjct: 119 IGKKGREVLAREHSALFTGHVNLSDVKSNNFTDASLSVGQMLTK-GFENGEFDVATLIYS 177
Query: 181 KFKSVVSYTTSDLPIFSLASVTAAP--KLG----VYDSLDADVIQSYLEFSMAAMLYYAM 234
+FK+V+S + + + AP LG +Y+ + ++++ L + + AM
Sbjct: 178 QFKNVLSQVPTAQQLIPATAPEGAPVIDLGGAQYIYEPSEEALLEALLPRYINTQILSAM 237
Query: 235 KE 236
E
Sbjct: 238 LE 239
>sp|Q2J3I3|ATPG_RHOP2 ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain
HaA2) GN=atpG PE=3 SV=1
Length = 291
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 12/187 (6%)
Query: 231 YYAMKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN 289
Y M +G +V +G K L+R + II R F++A +A++ +++N
Sbjct: 107 YALMNQGKEVKFFCVGRKGYEQLRRTFDKQIIENLELRSVRQLGFVNAEDIAKKVIARFN 166
Query: 290 ---FTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYL 340
F + Y++FKSV+S + + L V AP G Y+ + +++ + L
Sbjct: 167 AGEFDVCTLFYSRFKSVISQIPTAQQLIPL--VVEAPAAGSVATSYEYEPEEDEILSTLL 224
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
++A ++ A+ E S ++M++MDNA++NAG+MI K TL +NRTRQA+IT+ELIEI
Sbjct: 225 PRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEI 284
Query: 401 ISGASAL 407
ISGA A+
Sbjct: 285 ISGAEAI 291
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 116/242 (47%), Gaps = 25/242 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
MA+LK + +R+ S K QKIT++M+MV+A+K RA+ +AA+P + S
Sbjct: 1 MASLKDMRVRIASTKATQKITKAMQMVAASKLRRAQMAAEAARPYAEKMDSVISNIAGAA 60
Query: 80 PE---------GTESPK-ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
GT + LL+ T +RGL GA ++S+ R R L +G +V
Sbjct: 61 AGSPGAPVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERAYALMNQGKEVKFFC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKF 182
+G K L+R + II R F++A +A++ +++N F + Y++F
Sbjct: 121 VGRKGYEQLRRTFDKQIIENLELRSVRQLGFVNAEDIAKKVIARFNAGEFDVCTLFYSRF 180
Query: 183 KSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYLEFSMAAMLYYAMKE 236
KSV+S + + L V AP G Y+ + +++ + L ++A ++ A+ E
Sbjct: 181 KSVISQIPTAQQLIPL--VVEAPAAGSVATSYEYEPEEDEILSTLLPRNLAVQIFRALLE 238
Query: 237 GD 238
+
Sbjct: 239 NN 240
>sp|Q3SVJ3|ATPG_NITWN ATP synthase gamma chain OS=Nitrobacter winogradskyi (strain Nb-255
/ ATCC 25391) GN=atpG PE=3 SV=1
Length = 292
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 104/183 (56%), Gaps = 9/183 (4%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN--- 289
M +G +V +G K L+R++ I+ R F++A +A++ ++++
Sbjct: 110 MNQGKEVKFFCVGRKGYEQLRRIFEKQIVETVELRTVRQLGFVNAEDIARKVLARFDAGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGV-----YDSLDADVIQSYLEFSM 344
F + Y++F+SV++ + + LA AA G Y+ + +++ L ++
Sbjct: 170 FDVCTLFYSRFQSVIAQVPTAQQVIPLAVEDAARSDGPAPSYEYEPEEDEILNGLLPRNL 229
Query: 345 AAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGA 404
A ++ A+ E S ++MT+MDNA++NAGEMI K TL +NRTRQA+IT+ELIEIISGA
Sbjct: 230 AVQIFRALLENNASFYGAQMTAMDNATRNAGEMIRKQTLIYNRTRQAMITKELIEIISGA 289
Query: 405 SAL 407
A+
Sbjct: 290 EAV 292
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 118/241 (48%), Gaps = 22/241 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIG----------AGAS 69
MA+LK + +R+ S K QKIT++M+MV+A+K RA+ +AA+P A A+
Sbjct: 1 MASLKDMRVRIASTKATQKITKAMQMVAASKLRRAQNAAEAARPYAEKMDTVISNIASAA 60
Query: 70 AFYSKAEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
A A + LL+ T +RGL GA ++++ R R+ L +G +V
Sbjct: 61 AGSPNASPLLAGTGKDQVHLLLVCTGERGLSGAFNSAIVRLARDRAFALMNQGKEVKFFC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKF 182
+G K L+R++ I+ R F++A +A++ ++++ F + Y++F
Sbjct: 121 VGRKGYEQLRRIFEKQIVETVELRTVRQLGFVNAEDIARKVLARFDAGEFDVCTLFYSRF 180
Query: 183 KSVVSYTTSDLPIFSLASVTAAPKLGV-----YDSLDADVIQSYLEFSMAAMLYYAMKEG 237
+SV++ + + LA AA G Y+ + +++ L ++A ++ A+ E
Sbjct: 181 QSVIAQVPTAQQVIPLAVEDAARSDGPAPSYEYEPEEDEILNGLLPRNLAVQIFRALLEN 240
Query: 238 D 238
+
Sbjct: 241 N 241
>sp|B9KPI7|ATPG_RHOSK ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=atpG PE=3 SV=1
Length = 289
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNII--LAANEVGRR--PPTFLDASKVAQETSKYN 289
+ +G V ++T+G K R L+R G + I + +EV R P A + K
Sbjct: 110 LTQGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFS--LASVTAAPKLGVYDSLDADVIQSYLEFSMAAM 347
F I + +F+SV+S + + L Y+ + V+ L +A
Sbjct: 170 FDVATIFFARFQSVISQVPTAQQVIPAVFEGEGEVSSLYDYEPSEEGVLADLLPRGVATQ 229
Query: 348 LYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
++ A+ E SEQ +RM++MDNA++NAG+MI +LT+ +NR+RQA IT+ELIEIISGA AL
Sbjct: 230 IFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPI---------GAGASA 70
M +LK + R+ SVKN +KIT++M+MV+AAK RA+ +AA+P G S
Sbjct: 1 MPSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSV 60
Query: 71 FYSKAEVTTPEGTESPK-ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
S++ GT S K LL+ +T++RGLCG ++S+ R R L T+G V ++T
Sbjct: 61 GSSESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILT 120
Query: 127 IGDKSRAILQRLYGNNII--LAANEVGRR--PPTFLDASKVAQETSKYNFTSGKIIYNKF 182
+G K R L+R G + I + +EV R P A + K F I + +F
Sbjct: 121 VGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARF 180
Query: 183 KSVVS 187
+SV+S
Sbjct: 181 QSVIS 185
>sp|A3PIB8|ATPG_RHOS1 ATP synthase gamma chain OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=atpG PE=3 SV=1
Length = 289
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 6/180 (3%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNII--LAANEVGRR--PPTFLDASKVAQETSKYN 289
+ +G V ++T+G K R L+R G + I + +EV R P A + K
Sbjct: 110 LTQGKTVKILTVGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFS--LASVTAAPKLGVYDSLDADVIQSYLEFSMAAM 347
F I + +F+SV+S + + L Y+ + V+ L +A
Sbjct: 170 FDVATIFFARFQSVISQVPTAQQVIPAVFEGEGEVSSLYDYEPSEEGVLADLLPRGVATQ 229
Query: 348 LYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGASAL 407
++ A+ E SEQ +RM++MDNA++NAG+MI +LT+ +NR+RQA IT+ELIEIISGA AL
Sbjct: 230 IFTALLENGASEQGARMSAMDNATRNAGDMINRLTIEYNRSRQAAITKELIEIISGAEAL 289
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 97/185 (52%), Gaps = 17/185 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPI---------GAGASA 70
M +LK + R+ SVKN +KIT++M+MV+AAK RA+ +AA+P G S
Sbjct: 1 MPSLKDLKNRIGSVKNTRKITKAMQMVAAAKLRRAQEAAEAARPFAERMTAVMTGLAGSV 60
Query: 71 FYSKAEVTTPEGTESPK-ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
S++ GT S K LL+ +T++RGLCG ++S+ R R L T+G V ++T
Sbjct: 61 GSSESAPRLLAGTGSDKVHLLVVMTAERGLCGGFNSSIVRLARAHAAKLLTQGKTVKILT 120
Query: 127 IGDKSRAILQRLYGNNII--LAANEVGRR--PPTFLDASKVAQETSKYNFTSGKIIYNKF 182
+G K R L+R G + I + +EV R P A + K F I + +F
Sbjct: 121 VGKKGREQLRRDLGQHFIGHVDLSEVKRMGYPVAQGIARDLLDRFDKGEFDVATIFFARF 180
Query: 183 KSVVS 187
+SV+S
Sbjct: 181 QSVIS 185
>sp|A6WXX0|ATPG_OCHA4 ATP synthase gamma chain OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=atpG PE=3 SV=1
Length = 292
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 102/184 (55%), Gaps = 10/184 (5%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYN 289
+ EG V +IT+G K IL+R + + II N + F+ A ++ + +
Sbjct: 109 LAEGKTVKIITVGKKGADILRREFASLIIDHVNLREVKQLAFVHADQIGHKVIELFEQGE 168
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIF--SLASVTAAPKLG----VYDSLDADVIQSYLEFS 343
F + Y++FKSV++ + I S V A G Y+ A ++ + + +
Sbjct: 169 FDVCTLFYSEFKSVIAQIPTAQQIIPASAGDVAQAETAGDAIYEYEPDPAAILSTLIPRN 228
Query: 344 MAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISG 403
++ ++ A+ E E ++M++MDNA++NAG+MI KL++T+NR RQA IT+ELIEIISG
Sbjct: 229 ISVQIFRALLENVAGEMGAKMSAMDNATRNAGDMINKLSITYNRQRQAQITKELIEIISG 288
Query: 404 ASAL 407
A AL
Sbjct: 289 AEAL 292
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 97/186 (52%), Gaps = 20/186 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSK-AEVT 78
M +LK + R+ SVK QKIT++M+MV+AAK RA+ +AA+P A + A+
Sbjct: 1 MPSLKDLRNRIASVKATQKITKAMQMVAAAKLRRAQEAAEAARPYSQRMGAVLANIAQNV 60
Query: 79 TPEGTESPK----------ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVI 125
T G ++P LL+ T++RGLCG ++ +AR R+ L +G V +I
Sbjct: 61 T--GEDAPALMAGTGKDDVHLLVVCTAERGLCGGFNSQIARLARDHARKLLAEGKTVKII 118
Query: 126 TIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET----SKYNFTSGKIIYNK 181
T+G K IL+R + + II N + F+ A ++ + + F + Y++
Sbjct: 119 TVGKKGADILRREFASLIIDHVNLREVKQLAFVHADQIGHKVIELFEQGEFDVCTLFYSE 178
Query: 182 FKSVVS 187
FKSV++
Sbjct: 179 FKSVIA 184
>sp|B3Q746|ATPG_RHOPT ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain
TIE-1) GN=atpG PE=3 SV=1
Length = 291
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 12/187 (6%)
Query: 231 YYAMKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN 289
Y M +G V +G K L+R + II R F++A +A++ +++N
Sbjct: 107 YELMSQGKTVKFFCVGRKGYEQLRRNFEKQIIDNVELRSVRQIGFVNAEDIAKKVIARFN 166
Query: 290 ---FTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYL 340
F + Y++FKSV+S + + L VTA P G Y+ + +++ L
Sbjct: 167 AGEFDVCTLFYSRFKSVISQIPTAQQLIPL-EVTA-PAAGTVATSYEYEPEEDEILSGLL 224
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
++A ++ A+ E S ++M++MDNA++NAGEMI K TL +NRTRQA+IT+ELIEI
Sbjct: 225 PRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAMITKELIEI 284
Query: 401 ISGASAL 407
ISGA A+
Sbjct: 285 ISGAEAI 291
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSK----- 74
MA+LK + +R+ S K QKIT++M+MV+A+K RA+ +AA+P A S
Sbjct: 1 MASLKDMRVRIASTKATQKITKAMQMVAASKLRRAQMAAEAARPYAEKMEAVISNIAGAA 60
Query: 75 -----AEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRN---ELQTKGDKVLVIT 126
A V + LL+ T +RGL GA ++S+ R R EL ++G V
Sbjct: 61 AGSPGAPVLLAGNGKDQVHLLLVCTGERGLSGAFNSSIVRLARERAYELMSQGKTVKFFC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKF 182
+G K L+R + II R F++A +A++ +++N F + Y++F
Sbjct: 121 VGRKGYEQLRRNFEKQIIDNVELRSVRQIGFVNAEDIAKKVIARFNAGEFDVCTLFYSRF 180
Query: 183 KSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYLEFSMAAMLYYAMKE 236
KSV+S + + L VT AP G Y+ + +++ L ++A ++ A+ E
Sbjct: 181 KSVISQIPTAQQLIPL-EVT-APAAGTVATSYEYEPEEDEILSGLLPRNLAVQIFRALLE 238
Query: 237 GD 238
+
Sbjct: 239 NN 240
>sp|Q6NDD1|ATPG_RHOPA ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=atpG PE=3 SV=1
Length = 291
Score = 99.8 bits (247), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 104/187 (55%), Gaps = 12/187 (6%)
Query: 231 YYAMKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN 289
Y M +G V +G K L+R + II R F++A +A++ +++N
Sbjct: 107 YELMSQGKTVKFFCVGRKGYEQLRRNFEKQIIDNVELRSVRQIGFVNAEDIAKKVIARFN 166
Query: 290 ---FTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYL 340
F + Y++FKSV+S + + L VTA P G Y+ + +++ L
Sbjct: 167 AGEFDVCTLFYSRFKSVISQIPTAQQLIPL-EVTA-PAAGTVATSYEYEPEEDEILSGLL 224
Query: 341 EFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEI 400
++A ++ A+ E S ++M++MDNA++NAGEMI K TL +NRTRQA+IT+ELIEI
Sbjct: 225 PRNLAVQIFRALLENNASFYGAQMSAMDNATRNAGEMIRKQTLVYNRTRQAMITKELIEI 284
Query: 401 ISGASAL 407
ISGA A+
Sbjct: 285 ISGAEAI 291
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 25/242 (10%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSK----- 74
MA+LK + +R+ S K QKIT++M+MV+A+K RA+ +AA+P A S
Sbjct: 1 MASLKDMRVRIASTKATQKITKAMQMVAASKLRRAQMAAEAARPYAEKMEAVISNIAGAA 60
Query: 75 -----AEVTTPEGTESPKELLIAVTSDRGLCGAVHTSVARWIRN---ELQTKGDKVLVIT 126
A V + LL+ T +RGL GA ++S+ R R EL ++G V
Sbjct: 61 AGSPGAPVLLAGNGKDQVHLLLVCTGERGLSGAFNSSIVRLARERAYELMSQGKTVKFFC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN---FTSGKIIYNKF 182
+G K L+R + II R F++A +A++ +++N F + Y++F
Sbjct: 121 VGRKGYEQLRRNFEKQIIDNVELRSVRQIGFVNAEDIAKKVIARFNAGEFDVCTLFYSRF 180
Query: 183 KSVVSYTTSDLPIFSLASVTAAPKLGV------YDSLDADVIQSYLEFSMAAMLYYAMKE 236
KSV+S + + L VT AP G Y+ + +++ L ++A ++ A+ E
Sbjct: 181 KSVISQIPTAQQLIPL-EVT-APAAGTVATSYEYEPEEDEILSGLLPRNLAVQIFRALLE 238
Query: 237 GD 238
+
Sbjct: 239 NN 240
>sp|B9JBZ6|ATPG_AGRRK ATP synthase gamma chain OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=atpG PE=3 SV=1
Length = 294
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 105/198 (53%), Gaps = 37/198 (18%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILA-------------ANEVGRRPPTFLDASK 280
+ EG V + T+G K IL+R Y + II A+ +G+R +A +
Sbjct: 110 LAEGKTVKIFTVGKKGYDILRREYASLIIERKELRDVKRVGFENADALGKRIIEMFEAGE 169
Query: 281 VAQETSKYNFTSGKIIYNKFKSVVSYTTSDLPIF-----SLASVTAAPKLGVYD------ 329
F + Y++FKSV+S + L + ++ AA K VY+
Sbjct: 170 ---------FDVCTLFYSEFKSVISQVPTGLQLIPASAPAVVEEDAAHKGAVYEYEPDAA 220
Query: 330 SLDADVIQSYLEFSMAAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTR 389
S+ AD+I +++ ++ A+ E E S+M++MDNA++NAGEMI KLTL++NR R
Sbjct: 221 SILADLIPR----NISVQIFRALLENVAGEMGSKMSAMDNATRNAGEMINKLTLSYNRQR 276
Query: 390 QAVITRELIEIISGASAL 407
QA IT+ELIEIISGA AL
Sbjct: 277 QAQITKELIEIISGAEAL 294
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 114/236 (48%), Gaps = 46/236 (19%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSK--AEV 77
M +LK + R+ SVK QKIT++MKMV+AAK RA+ +AA+P A + A V
Sbjct: 1 MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMGAVLANITAAV 60
Query: 78 TTPEGT--------ESPKELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
+ +G +S LL+ T++RGLCG ++ +AR+ R+ L +G V + T
Sbjct: 61 SDADGAPLLMTGTGKSDVHLLVVCTAERGLCGGFNSQIARFARDHVRKLLAEGKTVKIFT 120
Query: 127 IGDKSRAILQRLYGNNIILA-------------ANEVGRRPPTFLDASKVAQETSKYNFT 173
+G K IL+R Y + II A+ +G+R +A + F
Sbjct: 121 VGKKGYDILRREYASLIIERKELRDVKRVGFENADALGKRIIEMFEAGE---------FD 171
Query: 174 SGKIIYNKFKSVVSYTTSDLPIF-----SLASVTAAPKLGVYD------SLDADVI 218
+ Y++FKSV+S + L + ++ AA K VY+ S+ AD+I
Sbjct: 172 VCTLFYSEFKSVISQVPTGLQLIPASAPAVVEEDAAHKGAVYEYEPDAASILADLI 227
>sp|Q21CY6|ATPG_RHOPB ATP synthase gamma chain OS=Rhodopseudomonas palustris (strain
BisB18) GN=atpG PE=3 SV=1
Length = 292
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 234 MKEGDKVLVITIGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQET-SKYN--- 289
M +G +V + +G K L+R + I+ R F++A +A + +++N
Sbjct: 110 MNQGKEVKLFCVGRKGYEQLRRTFDRQIVENIELRSVRQLGFVNAEDIAHKVVARFNNGE 169
Query: 290 FTSGKIIYNKFKSVVSYTTSDLPIFSLASVTAAPKLG-----VYDSLDADVIQSYLEFSM 344
F + Y++FKSV+S + I L A G Y+ + +++ L ++
Sbjct: 170 FDVCTLFYSRFKSVISQIPTAQQIIPLVVEAPAANAGPATSYEYEPEEDEILAGLLPRNL 229
Query: 345 AAMLYYAMKEGACSEQSSRMTSMDNASKNAGEMIEKLTLTFNRTRQAVITRELIEIISGA 404
A ++ A+ E S ++M++MDNA++NAG+MI K TL +NRTRQA+IT+ELIEIISGA
Sbjct: 230 AVQIFRALLENNASFYGAQMSAMDNATRNAGDMIRKQTLIYNRTRQAMITKELIEIISGA 289
Query: 405 SAL 407
A+
Sbjct: 290 EAI 292
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 113/241 (46%), Gaps = 22/241 (9%)
Query: 20 MATLKAISIRLKSVKNIQKITQSMKMVSAAKYTRAERELKAAKPIGAGASAFYSKAEVTT 79
MA+LK + +R+ S K QKIT++M+MV+A+K RA+ +AA+P A S
Sbjct: 1 MASLKDMRVRIASTKATQKITKAMQMVAASKLRRAQLAAEAARPYAERMDAVISNIASAA 60
Query: 80 PE---------GTESPK-ELLIAVTSDRGLCGAVHTSVARWIRNE---LQTKGDKVLVIT 126
GT + LL+ T +RGL GA ++S+ R R L +G +V +
Sbjct: 61 AGSPGAPVLLAGTGKDQVHLLLVCTGERGLSGAFNSSIVRLARERALSLMNQGKEVKLFC 120
Query: 127 IGDKSRAILQRLYGNNIILAANEVGRRPPTFLDASKVAQE-TSKYN---FTSGKIIYNKF 182
+G K L+R + I+ R F++A +A + +++N F + Y++F
Sbjct: 121 VGRKGYEQLRRTFDRQIVENIELRSVRQLGFVNAEDIAHKVVARFNNGEFDVCTLFYSRF 180
Query: 183 KSVVSYTTSDLPIFSLASVTAAPKLG-----VYDSLDADVIQSYLEFSMAAMLYYAMKEG 237
KSV+S + I L A G Y+ + +++ L ++A ++ A+ E
Sbjct: 181 KSVISQIPTAQQIIPLVVEAPAANAGPATSYEYEPEEDEILAGLLPRNLAVQIFRALLEN 240
Query: 238 D 238
+
Sbjct: 241 N 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.129 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,466,140
Number of Sequences: 539616
Number of extensions: 4651527
Number of successful extensions: 17951
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 15492
Number of HSP's gapped (non-prelim): 1551
length of query: 407
length of database: 191,569,459
effective HSP length: 120
effective length of query: 287
effective length of database: 126,815,539
effective search space: 36396059693
effective search space used: 36396059693
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)