Your job contains 1 sequence.
>psy9620
TYKSSSSGGSSRGTSRYGTSGGGGYGGSSRSGGYGGGYGGGSGGGRFGDRGGRGKNSTMG
GALRAIDWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANF
PDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ
LKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDRQVLMWSAT
WPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDE
NKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGILVATDVA
ARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQAKDLIDVLT
ESNHPVDPKLSALASRSGGSGGGYQVLHYSLKT
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9620
(453 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 769 1.4e-133 2
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 706 1.2e-132 2
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 746 8.8e-130 2
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 728 2.7e-126 2
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 729 5.6e-126 2
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 729 5.6e-126 2
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 731 1.3e-124 2
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 731 1.3e-124 2
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 731 1.3e-124 2
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 731 1.3e-124 2
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 731 1.3e-124 2
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 731 2.1e-124 2
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 731 2.1e-124 2
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 731 3.5e-124 2
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 723 3.5e-124 2
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 724 7.2e-124 2
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 717 1.2e-123 2
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 717 1.2e-123 2
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 717 1.2e-123 2
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 717 1.2e-123 2
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 717 1.2e-123 2
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 717 1.2e-123 2
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 717 1.2e-123 2
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 706 1.7e-122 2
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 640 6.8e-117 2
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 623 1.4e-114 2
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 651 7.1e-113 2
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 610 2.1e-111 2
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 569 7.1e-111 2
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 653 4.9e-110 2
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 717 1.2e-108 2
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 571 3.1e-108 2
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 573 9.4e-105 2
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 554 2.0e-102 2
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 563 1.4e-101 2
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 563 1.4e-101 2
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 731 8.9e-97 3
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 500 4.5e-84 2
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 510 1.1e-82 2
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 505 2.5e-75 2
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 437 4.4e-74 2
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE... 473 9.7e-74 2
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 413 2.2e-70 2
UNIPROTKB|Q9NXZ2 - symbol:DDX43 "Probable ATP-dependent R... 404 2.9e-68 2
UNIPROTKB|E1BII7 - symbol:DDX43 "Uncharacterized protein"... 395 7.4e-68 2
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 375 3.8e-67 2
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 375 3.8e-67 2
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 375 3.8e-67 2
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 375 3.8e-67 2
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 375 3.8e-67 2
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 375 3.8e-67 2
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 375 6.1e-67 2
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 382 1.2e-66 2
UNIPROTKB|F1S0I6 - symbol:DDX43 "Uncharacterized protein"... 389 9.0e-66 2
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 390 1.2e-64 2
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 392 9.6e-64 2
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 362 2.0e-63 2
UNIPROTKB|F1NQ09 - symbol:DDX43 "Uncharacterized protein"... 343 2.0e-63 2
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 362 1.5e-62 2
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 407 1.6e-62 2
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 415 2.2e-62 2
DICTYBASE|DDB_G0293064 - symbol:DDB_G0293064 species:4468... 385 2.6e-62 2
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 447 2.9e-62 2
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 364 3.0e-62 2
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 447 3.7e-62 2
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 348 8.8e-62 2
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 453 1.2e-61 2
DICTYBASE|DDB_G0275443 - symbol:helB1 "putative RNA splic... 360 1.4e-61 2
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 457 1.5e-61 2
DICTYBASE|DDB_G0281925 - symbol:DDB_G0281925 "DEAD/DEAH b... 359 2.6e-61 2
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 450 2.9e-61 2
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 450 3.0e-61 2
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 450 3.0e-61 2
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend... 432 5.3e-61 3
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 448 5.3e-61 2
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 448 5.3e-61 2
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 353 5.5e-61 2
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R... 366 6.0e-61 2
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 443 2.1e-60 2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 443 2.1e-60 2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 437 6.9e-60 2
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 446 8.3e-60 2
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 353 1.4e-59 2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 434 2.0e-59 2
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 434 2.1e-59 2
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 439 3.4e-59 2
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 420 1.4e-58 2
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 396 3.5e-58 2
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 436 3.6e-58 2
ASPGD|ASPL0000069536 - symbol:AN7424 species:162425 "Emer... 408 3.8e-58 2
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A... 356 4.4e-58 2
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 402 4.8e-58 2
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 596 5.1e-58 1
POMBASE|SPBC17D1.06 - symbol:dbp3 "ATP-dependent RNA heli... 395 5.9e-58 2
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 399 9.9e-58 2
WB|WBGene00013214 - symbol:Y54G11A.3 species:6239 "Caenor... 322 1.2e-57 2
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 349 2.7e-57 2
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 349 2.7e-57 2
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 349 2.7e-57 2
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 349 2.7e-57 2
WARNING: Descriptions of 914 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 769 (275.8 bits), Expect = 1.4e-133, Sum P(2) = 1.4e-133
Identities = 142/201 (70%), Positives = 173/201 (86%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQVLMWSATWP+EV++LAE+FL++YIQ+NIGSL+LSANHNI Q+V+VC E+EK KL
Sbjct: 333 RPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKL 392
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL DIS+++E KTIIF ETK++VD+IT++I GW A IHGDKSQQERD+VL FRN
Sbjct: 393 IKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRN 452
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
GR ILVATDVAARGLDVDDVKFVIN+DYP+NSEDY+HRIGRTGRS+NTGT+YT FT N
Sbjct: 453 GRHSILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSN 512
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+ +A DLI VL E+N ++PK
Sbjct: 513 ANKANDLIQVLREANQTINPK 533
Score = 561 (202.5 bits), Expect = 1.4e-133, Sum P(2) = 1.4e-133
Identities = 107/178 (60%), Positives = 137/178 (76%)
Query: 55 KNSTMGGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APNP 111
++S G L I W NL PF KNF+ P SVL R+ E + F +++T+KG+ P P
Sbjct: 96 RSSNHGAHLPKIVWSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQVPTP 155
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
EF E FPDYV+ E+++QGF +PT IQAQGWPIAMSG ++VGVAQTGSGKTLAY+LPA
Sbjct: 156 SIEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPA 215
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+VHIN+Q +L+ GDGPI LVLAPTRELAQQIQ+VA +FGS+T++R+TC++GGA KG Q
Sbjct: 216 VVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQ 273
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 706 (253.6 bits), Expect = 1.2e-132, Sum P(2) = 1.2e-132
Identities = 134/202 (66%), Positives = 166/202 (82%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL +YIQINIGSL LSANHNI+QVV+VC E KE KL
Sbjct: 457 RPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKL 516
Query: 289 FGLLNDI--SSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
LL+DI +S+ K IIF ETKR+VD + + I+++G IHGDKSQ ERD+VL+EF
Sbjct: 517 KTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREF 576
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
R+G++ ILVATDVAARGLDVD +K+VINFDYP NSEDYIHRIGRTGRS+ GTS+ FFT+
Sbjct: 577 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 636
Query: 407 QNSRQAKDLIDVLTESNHPVDP 428
N++QAK L+DVL E+N ++P
Sbjct: 637 NNAKQAKALVDVLREANQEINP 658
Score = 615 (221.5 bits), Expect = 1.2e-132, Sum P(2) = 1.2e-132
Identities = 109/167 (65%), Positives = 141/167 (84%)
Query: 63 LRAIDWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
+R +D+ NL PF+KNF+ P+V NRSP+EVQ +R++ ++T++G PNPI +F+E + PD
Sbjct: 231 MRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQVPNPIQDFSEVHLPD 290
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLK 182
YV+KE++RQG+ PT IQAQGWPIAMSGSN VG+A+TGSGKTL Y+LPAIVHIN+Q L+
Sbjct: 291 YVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQ 350
Query: 183 PGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
GDGPI LVLAPTRELAQQIQ+VA +FGSS+Y+R+TCV+GGA KG Q
Sbjct: 351 RGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQ 397
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 746 (267.7 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 137/201 (68%), Positives = 168/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YIQIN+G+L LSANHNI Q+V+VC + EKE+KL
Sbjct: 272 RPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDKL 331
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL +I S+ ENKTIIF ETKR+ D +T+ ++ GW A+GIHGDK+QQERD+VL EF+
Sbjct: 332 IRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKY 391
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVINFDYPNNSEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 392 GKAPILIATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNN 451
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA DL+ VL E+N ++PK
Sbjct: 452 MKQAHDLVSVLREANQAINPK 472
Score = 548 (198.0 bits), Expect = 8.8e-130, Sum P(2) = 8.8e-130
Identities = 102/173 (58%), Positives = 131/173 (75%)
Query: 60 GGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFA 116
G LR W LP FEKNF+ +P V RS EV+ +R ++T+KG + P PI +F
Sbjct: 40 GDRLRKKHWNLDELPKFEKNFYQENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFH 99
Query: 117 EANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHIN 176
EANFP YV+ + +Q + PTPIQAQGWP+A+SG +MVG+AQTGSGKTL+Y+LPAIVHIN
Sbjct: 100 EANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHIN 159
Query: 177 HQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
HQ L+ GDGPI LVLAPTRELAQQ+Q+VA ++G ++ ++STC+YGGA KGPQ
Sbjct: 160 HQPFLEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQ 212
Score = 39 (18.8 bits), Expect = 4.6e-76, Sum P(2) = 4.6e-76
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 207 RDFGSSTYLRSTCVYGGASKGPQPDRQ 233
RD GS Y +GG+ GP P ++
Sbjct: 11 RDRGS--YSSGPPRFGGSRNGPPPAKK 35
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 728 (261.3 bits), Expect = 2.7e-126, Sum P(2) = 2.7e-126
Identities = 132/201 (65%), Positives = 169/201 (84%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y+QINIG+L LSANHNI Q+V+VC E+EK+NKL
Sbjct: 271 RPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNKL 330
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETK++ D++T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 331 IQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRS 390
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 391 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 450
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
RQA+DL+ VL E+ ++PK
Sbjct: 451 LRQARDLVRVLEEARQAINPK 471
Score = 533 (192.7 bits), Expect = 2.7e-126, Sum P(2) = 2.7e-126
Identities = 101/173 (58%), Positives = 132/173 (76%)
Query: 60 GGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFA 116
G LR W LP FEKNF++ +P V + S ++V+ +R K ++T++G+ P P+T F
Sbjct: 39 GDRLRKKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFH 98
Query: 117 EANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHIN 176
+A FP YV+ + +Q F PT IQAQG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHIN
Sbjct: 99 QAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHIN 158
Query: 177 HQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
HQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G S+ ++STCVYGGA KGPQ
Sbjct: 159 HQPYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQ 211
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 729 (261.7 bits), Expect = 5.6e-126, Sum P(2) = 5.6e-126
Identities = 132/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y+ INIG+L LSANHNI Q+V+VC + EK++KL
Sbjct: 258 RPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKL 317
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D +T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 318 IRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 377
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 378 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 437
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 438 IKQVNDLISVLREANQAINPK 458
Score = 529 (191.3 bits), Expect = 5.6e-126, Sum P(2) = 5.6e-126
Identities = 101/173 (58%), Positives = 127/173 (73%)
Query: 60 GGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFA 116
G L W LP FEKNF+ P V+ R+ EV+ +R ++T++G N P PI F
Sbjct: 26 GEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFY 85
Query: 117 EANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHIN 176
EANFP V++ ++RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHIN
Sbjct: 86 EANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHIN 145
Query: 177 HQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
HQ L+ GDGPI LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 146 HQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 198
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 729 (261.7 bits), Expect = 5.6e-126, Sum P(2) = 5.6e-126
Identities = 132/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y+ INIG+L LSANHNI Q+V+VC + EK++KL
Sbjct: 266 RPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDKL 325
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D +T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 326 IRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 385
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 386 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 445
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 446 IKQVNDLISVLREANQAINPK 466
Score = 529 (191.3 bits), Expect = 5.6e-126, Sum P(2) = 5.6e-126
Identities = 101/173 (58%), Positives = 127/173 (73%)
Query: 60 GGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFA 116
G L W LP FEKNF+ P V+ R+ EV+ +R ++T++G N P PI F
Sbjct: 34 GEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPKPIINFY 93
Query: 117 EANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHIN 176
EANFP V++ ++RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHIN
Sbjct: 94 EANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHIN 153
Query: 177 HQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
HQ L+ GDGPI LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 154 HQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 206
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 731 (262.4 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 514 (186.0 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 96/160 (60%), Positives = 121/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 731 (262.4 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 327 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 386
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 387 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 446
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 447 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 506
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 507 IKQVSDLISVLREANQAINPK 527
Score = 514 (186.0 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 96/160 (60%), Positives = 121/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ +
Sbjct: 108 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 167
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 168 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 227
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 228 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 267
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 731 (262.4 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 514 (186.0 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 96/160 (60%), Positives = 121/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 731 (262.4 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 514 (186.0 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 96/160 (60%), Positives = 121/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 731 (262.4 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 514 (186.0 bits), Expect = 1.3e-124, Sum P(2) = 1.3e-124
Identities = 96/160 (60%), Positives = 121/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 731 (262.4 bits), Expect = 2.1e-124, Sum P(2) = 2.1e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 512 (185.3 bits), Expect = 2.1e-124, Sum P(2) = 2.1e-124
Identities = 96/160 (60%), Positives = 120/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Score = 39 (18.8 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 319 SIQNYGWAAVGIHGDKSQQERDYVLKE 345
S Q YG +H +QQ Y L +
Sbjct: 573 STQQYGSNVANMHNGMNQQAYAYPLPQ 599
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 731 (262.4 bits), Expect = 2.1e-124, Sum P(2) = 2.1e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 512 (185.3 bits), Expect = 2.1e-124, Sum P(2) = 2.1e-124
Identities = 96/160 (60%), Positives = 120/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 731 (262.4 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 510 (184.6 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 95/159 (59%), Positives = 120/159 (75%)
Query: 72 PPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKR 130
P FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ + R
Sbjct: 52 PKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIAR 111
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
Q F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI L
Sbjct: 112 QNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICL 171
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
VLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 172 VLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 723 (259.6 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 131/201 (65%), Positives = 168/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y+QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 266 RPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKL 325
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 326 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 385
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 386 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 445
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 446 LKQARELIKVLEEANQAINPK 466
Score = 518 (187.4 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 99/174 (56%), Positives = 125/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG--NAPNPITEF 115
G LR W LP FEKNF+ P V +P+EV+ R K ++T++G P P+ F
Sbjct: 33 GERLRKKKWDLNELPKFEKNFYVEHPEVARLTPYEVEELRRKKEITIRGMEGCPKPVFAF 92
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
+ +FP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 93 HQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 152
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 153 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 206
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 724 (259.9 bits), Expect = 7.2e-124, Sum P(2) = 7.2e-124
Identities = 132/201 (65%), Positives = 166/201 (82%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 270 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 329
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQER +VL EF++
Sbjct: 330 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKH 389
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 390 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 449
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 450 IKQVSDLISVLREANQAINPK 470
Score = 514 (186.0 bits), Expect = 7.2e-124, Sum P(2) = 7.2e-124
Identities = 96/160 (60%), Positives = 121/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 717 (257.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 447
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 448 LKQARELIKVLEEANQAINPK 468
Score = 519 (187.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 35 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 94
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 95 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 154
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 155 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 208
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 717 (257.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 447
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 448 LKQARELIKVLEEANQAINPK 468
Score = 519 (187.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 35 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 94
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 95 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 154
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 155 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 208
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 717 (257.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 349 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 408
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 409 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 468
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 469 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 528
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 529 LKQARELIKVLEEANQAINPK 549
Score = 519 (187.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 116 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 175
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 176 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 235
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 236 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 289
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 717 (257.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 347 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 406
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 407 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 466
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 467 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 526
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 527 LKQARELIKVLEEANQAINPK 547
Score = 519 (187.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 114 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 173
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 174 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 233
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 234 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 287
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 717 (257.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 347 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 406
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 407 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 466
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 467 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 526
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 527 LKQARELIKVLEEANQAINPK 547
Score = 519 (187.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 114 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 173
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 174 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 233
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 234 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 287
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 717 (257.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 349 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 408
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 409 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 468
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 469 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 528
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 529 LKQARELIKVLEEANQAINPK 549
Score = 519 (187.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 116 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 175
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 176 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 235
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 236 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 289
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 717 (257.5 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 388 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 447
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 448 LKQARELIKVLEEANQAINPK 468
Score = 519 (187.8 bits), Expect = 1.2e-123, Sum P(2) = 1.2e-123
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 35 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 94
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 95 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 154
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 155 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 208
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 706 (253.6 bits), Expect = 1.7e-122, Sum P(2) = 1.7e-122
Identities = 131/203 (64%), Positives = 167/203 (82%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 268 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 327
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 328 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 387
Query: 349 GRAGILVATDVAARGL--DVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
G+A IL+ATDVA+RGL DV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT
Sbjct: 388 GKAPILIATDVASRGLGFDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 447
Query: 407 QNSRQAKDLIDVLTESNHPVDPK 429
N +QA++LI VL E+N ++PK
Sbjct: 448 GNLKQARELIKVLEEANQAINPK 470
Score = 519 (187.8 bits), Expect = 1.7e-122, Sum P(2) = 1.7e-122
Identities = 101/174 (58%), Positives = 124/174 (71%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 35 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 94
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 95 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 154
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
NHQ L+ GDGPI LVLAPTRELAQQ+Q+VA D+G + L+STC+YGGA KGPQ
Sbjct: 155 NHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQ 208
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 640 (230.4 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 114/201 (56%), Positives = 155/201 (77%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ MWSATWP+EV++LA DFL++YIQ+NIGS+ LSANH I Q+VEV +E EK +++
Sbjct: 316 RPDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDRM 375
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L I NK ++F TKR D+IT+ ++ GW A+ IHGDK QQERD+VL EF+
Sbjct: 376 IKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKT 435
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G++ I+VATDVA+RG+DV D+ VIN+DYPNNSEDY+HRIGRTGR+ GT+ TFFT N
Sbjct: 436 GKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDN 495
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
++QA+DL+ +L+E+ +DP+
Sbjct: 496 AKQARDLVTILSEAKQQIDPR 516
Score = 532 (192.3 bits), Expect = 6.8e-117, Sum P(2) = 6.8e-117
Identities = 103/174 (59%), Positives = 126/174 (72%)
Query: 59 MGGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEF 115
+G L+ DW LP FEK+F+ P V RS EV FR K +MT++G + P P+ F
Sbjct: 83 LGSGLKKQDWDLDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETF 142
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
EA FP YVL EVK QGF++PT IQ+QGWP+A+SG ++VG+A+TGSGKTL+Y LPAIVHI
Sbjct: 143 DEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHI 202
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
N Q L PGDGPIVL+LAPTRELA QIQ FG S+ +R+TCVYGG KGPQ
Sbjct: 203 NAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQ 256
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 623 (224.4 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 114/203 (56%), Positives = 155/203 (76%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV+ +A DFL +IQ+NIGSL LSANH I Q+VEV +E EK +++
Sbjct: 301 RPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDRM 360
Query: 289 FGLLNDI-SSKD-ENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
+ + KD +NK +IF TKR D+IT+ ++ GW A+ IHGDK Q ERD+VL +F
Sbjct: 361 IRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQF 420
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
+ G++ I+VATDVA+RG+DV ++ V+N+DYPNNSEDYIHRIGRTGR+ GT+ TFFT
Sbjct: 421 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 480
Query: 407 QNSRQAKDLIDVLTESNHPVDPK 429
+NS+QA+DL+ VL E+ +DP+
Sbjct: 481 ENSKQARDLLGVLQEAKQEIDPR 503
Score = 527 (190.6 bits), Expect = 1.4e-114, Sum P(2) = 1.4e-114
Identities = 104/176 (59%), Positives = 125/176 (71%)
Query: 57 STMGGALRAIDWG-N-LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPIT 113
S +G L+ DW N LP FEK+F+ P V NRS EV FR +H M ++G+ P P+
Sbjct: 66 SNLGAGLQKQDWDINALPKFEKHFYKEHPDVTNRSQAEVDKFRREHSMAVQGSDVPKPVE 125
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
F EA FP YV+ EVK QGF PT IQ+QGWP+A+SG ++VG+A+TGSGKTL Y LPAIV
Sbjct: 126 TFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIV 185
Query: 174 HINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
HIN Q L PGDGPIVL+LAPTRELA QIQ FG S+ +R+TCVYGG KGPQ
Sbjct: 186 HINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQ 241
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 651 (234.2 bits), Expect = 7.1e-113, Sum P(2) = 7.1e-113
Identities = 123/199 (61%), Positives = 159/199 (79%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQV+MWSATWP+EVQ LA DFL+ YIQINIGS+ LSANHNI+Q+VE+C E EK +L
Sbjct: 415 RPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRL 474
Query: 289 FGLLNDIS-----SKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVL 343
LLN+IS + NK I+F ETK KV+ I + I+ G+ A IHGDK+Q ERD VL
Sbjct: 475 VCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVL 534
Query: 344 KEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTF 403
K+FRNG++ IL+ATDVA+RGLDV+D+++VIN+DYPN+SE+Y+HRIGRTGR GT+YTF
Sbjct: 535 KDFRNGKSNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQLGTAYTF 594
Query: 404 FTQQNSRQAKDLIDVLTES 422
FT N++QA++LI VL E+
Sbjct: 595 FTPDNAKQARELISVLEEA 613
Score = 488 (176.8 bits), Expect = 7.1e-113, Sum P(2) = 7.1e-113
Identities = 101/194 (52%), Positives = 137/194 (70%)
Query: 68 WGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLK 126
W NL PF K+F++ P+ L +S +V R + ++T+ GN P+P+ F E++ P +V++
Sbjct: 191 WENLEPFLKDFYNIHPNTLAKSEQQVAEIRRELEITVSGNELPHPVVSFEESSLPAHVIE 250
Query: 127 EVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDG 186
E+KRQGF +PT IQ+QGWPIA+SG ++VG+AQTGSGKTLAYMLPAIVHI +Q + G+G
Sbjct: 251 EMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLPAIVHIGNQPPIIRGEG 310
Query: 187 PIVLVLAPTRELAQQIQEVARDFGS--STYLRSTCVYGGASKGPQP---DRQVLMWSATW 241
PI LVLAPTRELAQQIQ V RD+G +R TC++GG+SK PQ DR V + AT
Sbjct: 311 PIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVPQARDLDRGVEVIIATP 370
Query: 242 PREVQKLAEDFLDS 255
R + DFL++
Sbjct: 371 GRLI-----DFLEN 379
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 610 (219.8 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 113/201 (56%), Positives = 151/201 (75%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LA D+L+ IQ+ +GSL LSA+HNI Q+VEV ++ EK ++L
Sbjct: 289 RPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRL 348
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L S +E KT+IFA TKR D ITK ++ GW A+ IHGDK Q+ERD+VL+EFRN
Sbjct: 349 NKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRN 408
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
GR+ I+VATDVAARG+DV + +VIN+D P N EDY+HRIGRTGR+ TGT+ +FFT+QN
Sbjct: 409 GRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQN 468
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
LI ++ E+N + P+
Sbjct: 469 KGLGAKLISIMREANQNIPPE 489
Score = 510 (184.6 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 100/160 (62%), Positives = 118/160 (73%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ SV +RS E+ FR +++MT+ G+ P PIT F EA FPDYVL EVK
Sbjct: 70 LPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVK 129
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
+GFD+PT IQ QGWP+A+SG +MVG+A TGSGKTL+Y LP IVHIN Q L PGDGPIV
Sbjct: 130 AEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIV 189
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELA QIQ FG S+ +R+TCVYGG K Q
Sbjct: 190 LVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQ 229
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 569 (205.4 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 106/201 (52%), Positives = 143/201 (71%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EVQ+L D+L+ IQ+ IGSL L+A+H I Q+VEV E K ++L
Sbjct: 303 RPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDRL 362
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L ++ +NK ++FA TKR D+IT +++ GW A+ IHGDK Q ERD+VL EFR
Sbjct: 363 VKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRK 422
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+ I+VATDVAARG+DV + VIN+D P N EDY+HRIGRTGR +GT+ +FFT+ N
Sbjct: 423 GKTSIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGN 482
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
S+ DL ++ E+N V P+
Sbjct: 483 SKLGGDLCKIMREANQTVPPE 503
Score = 546 (197.3 bits), Expect = 7.1e-111, Sum P(2) = 7.1e-111
Identities = 106/170 (62%), Positives = 129/170 (75%)
Query: 63 LRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEAN 119
L A W LP FEKNF+ P V RS +++ FR +++MT+KG+ P+PIT F EA
Sbjct: 74 LTAPQWDLEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHDIPHPITTFDEAG 133
Query: 120 FPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQS 179
FPDYVL+EVK QGF +PTPIQ QGWP+A+SG +M+G+A TGSGKTL+Y LP+IVHIN Q
Sbjct: 134 FPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQP 193
Query: 180 QLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
QL+ GDGPIVLVLAPTRELA QIQ FG S+ +R+TCVYGGA KGPQ
Sbjct: 194 QLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQ 243
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 653 (234.9 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 122/198 (61%), Positives = 156/198 (78%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LM+SATWP+EV+ LA DF +N+GSL L+ANHNI QVV++ EH K+ KL
Sbjct: 305 RPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKL 364
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LLN I ++ E KTIIF ETKRK D++T++++ GW + IHGDK+Q ERD+VL+EF+
Sbjct: 365 MELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKA 424
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+ I++ATDVAARGLDVDD+KFVIN+DYPNNSEDY+HRIGRTGRSD GT+YTFFT N
Sbjct: 425 GKTPIMLATDVAARGLDVDDIKFVINYDYPNNSEDYVHRIGRTGRSDKKGTAYTFFTHTN 484
Query: 409 SRQAKDLIDVLTESNHPV 426
+ +AKDL+ VL E+ V
Sbjct: 485 ASKAKDLLKVLDEAKQTV 502
Score = 454 (164.9 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 90/177 (50%), Positives = 122/177 (68%)
Query: 56 NSTMGGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPI 112
N + GG LR +DW NL P EK+F+H + +V R +E+ + +Q+TL+G P P+
Sbjct: 70 NGSAGGRLRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPV 129
Query: 113 TEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAI 172
EF EA P + E+ F +PT IQ+ WPIAMSG +++ +A+TGSGKTLA+MLPA+
Sbjct: 130 FEFNEAPLPGQI-HELLYGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPAL 188
Query: 173 VHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
VHI Q+ + G+GP VLVL PTRELAQQ+QEV+ DF S L+ TC++GGASKGPQ
Sbjct: 189 VHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQ 245
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 717 (257.5 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 131/201 (65%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL Y QIN+G+L LSANHNI Q+V+VC E EK++KL
Sbjct: 267 RPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL 326
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I ++ ENKTIIF ETKR+ D +T+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 327 IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRS 386
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDY+HRIGRT RS N GT+YTFFT N
Sbjct: 387 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 446
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+QA++LI VL E+N ++PK
Sbjct: 447 LKQARELIKVLEEANQAINPK 467
Score = 377 (137.8 bits), Expect = 1.2e-108, Sum P(2) = 1.2e-108
Identities = 83/173 (47%), Positives = 103/173 (59%)
Query: 60 GGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN--APNPITEF 115
G LR W LP FEKNF+ P V +P+EV R K ++T++G P P+ F
Sbjct: 35 GERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAF 94
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
ANFP YV+ + Q F PTPIQ QG+P+A+SG +MVG+AQTGSGKTLAY+LPAIVHI
Sbjct: 95 HHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI 154
Query: 176 NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFG-SSTYLRSTCVYGGASKG 227
NHQ L+ GDGPIV VL P + DF + L C G + KG
Sbjct: 155 NHQPYLERGDGPIVSVL-PFFSTLFSVYRGGTDFKFKCSSLFWVCFLGQSLKG 206
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 571 (206.1 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 108/201 (53%), Positives = 151/201 (75%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ L WSATWP+EV++L++ FL + ++ IGS L AN I+Q+V+V +E +K NKL
Sbjct: 275 RPDRQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKL 334
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL DI D ++ ++F +TK+ D+IT+ ++ GW A+ IHGDKSQ ERD+VL EFR+
Sbjct: 335 VKLLEDIM--DGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRS 392
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G++ I+ ATDVAARGLDV DVK+VIN+D+P + EDY+HRIGRTGR+ GT+YTFFT N
Sbjct: 393 GKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVAN 452
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+R AK+L ++L E+ V P+
Sbjct: 453 ARFAKELTNILQEAGQKVSPE 473
Score = 519 (187.8 bits), Expect = 3.1e-108, Sum P(2) = 3.1e-108
Identities = 95/167 (56%), Positives = 126/167 (75%)
Query: 64 RAIDWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPD 122
R +D L PFEKNF+ SP+V + EV+ +R ++T++G + P P+ F + FPD
Sbjct: 49 RKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPD 108
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLK 182
YVL+EVK+ GF PTPIQ+QGWP+AM G +++G+A+TGSGKTL+Y+LPAIVH+N Q L
Sbjct: 109 YVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLA 168
Query: 183 PGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
GDGPIVLVLAPTRELA QIQ+ A FGSS+ +++TC+YGG KGPQ
Sbjct: 169 HGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQ 215
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 573 (206.8 bits), Expect = 9.4e-105, Sum P(2) = 9.4e-105
Identities = 103/198 (52%), Positives = 149/198 (75%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LM+SATWP+EVQ LA DFL +IQ++IGS ++ANHN++Q+VEVC + EK+ ++
Sbjct: 560 RPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERM 619
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L + +DE K I+FAET++ VD + + +Q G+ ++GIHG+KSQ ERD+VL +F+N
Sbjct: 620 LSFLGSVG-RDE-KVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKN 677
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G I++ATDVA+RGLD+ D+K+V+N+D+PN E YIHRIGRT R+ +G SY+ T N
Sbjct: 678 GMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDN 737
Query: 409 SRQAKDLIDVLTESNHPV 426
+R A +LI VLTE+ +
Sbjct: 738 ARLANELIKVLTEAKQKI 755
Score = 484 (175.4 bits), Expect = 9.4e-105, Sum P(2) = 9.4e-105
Identities = 95/175 (54%), Positives = 121/175 (69%)
Query: 58 TMGGALRAIDW--GNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPITE 114
+ G AL I W LP FEKNF+ P V + E++ FR QMT+KG P PI +
Sbjct: 326 SFGSALSPISWDLSKLPRFEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQ 385
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F +A FP Y++KE+ GF PTPIQ+Q WPIA+ G +++G+A+TGSGKTLA++LP+IVH
Sbjct: 386 FTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVH 445
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
IN Q L+ DGPIVLVLAPTRELA QIQE FG ++ + +TCVYGGASK Q
Sbjct: 446 INAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQ 500
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 554 (200.1 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 108/201 (53%), Positives = 143/201 (71%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
+PDRQ L+WSATWPREV+ LA FL D Y I IGS L AN +I QV+E+ EK N+
Sbjct: 341 RPDRQTLLWSATWPREVETLARQFLRDPYKAI-IGSTDLKANQSINQVIEIVPTPEKYNR 399
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LL + D +K +IF ETKR D++T+ ++ GW A+ IHGDK+Q ERD VL EF+
Sbjct: 400 LLTLLKQLM--DGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFK 457
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+GR+ I+ ATDVAARGLDV D+K V+N+D+PN EDYIHRIGRTGR+ G ++TFFT
Sbjct: 458 SGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHD 517
Query: 408 NSRQAKDLIDVLTESNHPVDP 428
N++ A++L+ +L E+ V P
Sbjct: 518 NAKFARELVKILQEAGQVVPP 538
Score = 481 (174.4 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 88/164 (53%), Positives = 124/164 (75%)
Query: 67 DWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVL 125
++GNL FEKNF+ SP+V + +V +R + ++++G + P P+ F +ANFPD +L
Sbjct: 118 NFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNIL 177
Query: 126 KEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGD 185
+ + + GF PTPIQAQGWP+A+ G +++G+A+TGSGKTLAY+LPA+VH++ Q +L D
Sbjct: 178 EAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPRLGQDD 237
Query: 186 GPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
GPIVL+LAPTRELA QIQE +R FG + +RSTC+YGGA KGPQ
Sbjct: 238 GPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQ 281
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 563 (203.2 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 109/202 (53%), Positives = 147/202 (72%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
+PDRQ LMWSATWP+EVQ LA+D + IQ+N+GSLTL+A +I+Q + + EHEK
Sbjct: 289 RPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGN 348
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LL I KD ++ I+F ETK+ D ITK+++ G A+ IHGDK Q+ER +VL EF+
Sbjct: 349 LKSLLQRIF-KDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFK 407
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
G++ I++ATDVA+RGLD+ +VK+VINFD+PN EDY+HRIGRTGR+ + G S+TF T
Sbjct: 408 TGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTAD 467
Query: 408 NSRQAKDLIDVLTESNHPVDPK 429
R AKDL+ +L ES PV P+
Sbjct: 468 KYRLAKDLVKILRESEQPVPPQ 489
Score = 464 (168.4 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 93/178 (52%), Positives = 118/178 (66%)
Query: 56 NSTMGGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMT-LKG-NAPNP 111
++ G L IDW NL PFEKNF+ + S EV+ RDKH++T L+G N P P
Sbjct: 52 SNNYGKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKP 111
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+ + FPDYV+K +K PTPIQ QGWPIA+SG +M+G A+TGSGKTLA++LPA
Sbjct: 112 VVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPA 171
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
VHI Q LK GDGPIVLVLAPTRELA+QI++ F + + +R+TC YGG K Q
Sbjct: 172 FVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQ 229
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 563 (203.2 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 109/202 (53%), Positives = 147/202 (72%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
+PDRQ LMWSATWP+EVQ LA+D + IQ+N+GSLTL+A +I+Q + + EHEK
Sbjct: 289 RPDRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGN 348
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LL I KD ++ I+F ETK+ D ITK+++ G A+ IHGDK Q+ER +VL EF+
Sbjct: 349 LKSLLQRIF-KDNDRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFK 407
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
G++ I++ATDVA+RGLD+ +VK+VINFD+PN EDY+HRIGRTGR+ + G S+TF T
Sbjct: 408 TGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSHGASFTFLTAD 467
Query: 408 NSRQAKDLIDVLTESNHPVDPK 429
R AKDL+ +L ES PV P+
Sbjct: 468 KYRLAKDLVKILRESEQPVPPQ 489
Score = 464 (168.4 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 93/178 (52%), Positives = 118/178 (66%)
Query: 56 NSTMGGALRAIDWG--NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMT-LKG-NAPNP 111
++ G L IDW NL PFEKNF+ + S EV+ RDKH++T L+G N P P
Sbjct: 52 SNNYGKNLAPIDWKTINLVPFEKNFYKEHEDISKLSTKEVKEIRDKHKITILEGENVPKP 111
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+ + FPDYV+K +K PTPIQ QGWPIA+SG +M+G A+TGSGKTLA++LPA
Sbjct: 112 VVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPA 171
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
VHI Q LK GDGPIVLVLAPTRELA+QI++ F + + +R+TC YGG K Q
Sbjct: 172 FVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQ 229
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 731 (262.4 bits), Expect = 8.9e-97, Sum P(3) = 8.9e-97
Identities = 133/201 (66%), Positives = 167/201 (83%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LMWSATWP+EV++LAEDFL YI INIG+L LSANHNI Q+V+VC + EK+ KL
Sbjct: 191 RPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKL 250
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L+ +I S+ ENKTI+F ETKR+ D++T+ ++ GW A+GIHGDKSQQERD+VL EF++
Sbjct: 251 IRLMEEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKH 310
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+A IL+ATDVA+RGLDV+DVKFVIN+DYPN+SEDYIHRIGRT RS TGT+YTFFT N
Sbjct: 311 GKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNN 370
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+Q DLI VL E+N ++PK
Sbjct: 371 IKQVSDLISVLREANQAINPK 391
Score = 172 (65.6 bits), Expect = 8.9e-97, Sum P(3) = 8.9e-97
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 184 GDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
GDGPI LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 86 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 131
Score = 92 (37.4 bits), Expect = 8.9e-97, Sum P(3) = 8.9e-97
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAP 109
LP FEKNF+ P + R+ EV+ +R ++T++G+ P
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGDGP 89
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 500 (181.1 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 103/200 (51%), Positives = 143/200 (71%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLT-LSANHNIQQVVEVCAEHEKENKLFG 290
RQ LM++ATWP+ V+K+A D L + Q+NIG++ L AN +I Q +EV A EK+ +L
Sbjct: 336 RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQ 395
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSI-QNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
+L S + +K IIF TKR D++T+++ + +G AA IHGDKSQ ERD VL +FR+G
Sbjct: 396 ILR--SQEPGSKVIIFCSTKRMCDQLTRNLTRQFGAAA--IHGDKSQPERDNVLNQFRSG 451
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
R +LVATDVAARGLDV D++ V+N+D+PN EDY+HRIGRTGR+ TG ++TFF Q+S
Sbjct: 452 RTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTFFGDQDS 511
Query: 410 RQAKDLIDVLTESNHPVDPK 429
+ A DLI +L +N V P+
Sbjct: 512 KHASDLIKILEGANQRVPPQ 531
Score = 361 (132.1 bits), Expect = 4.5e-84, Sum P(2) = 4.5e-84
Identities = 74/153 (48%), Positives = 98/153 (64%)
Query: 81 PSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKRQGFDRPTPI 139
P PS S +A+ +H++T+ G P P+ F FP +L+EV GF PTPI
Sbjct: 125 PLPSSAPASELSPEAYSRRHEITVSGGQVPPPLMSFEATGFPPELLREVLSAGFSAPTPI 184
Query: 140 QAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH---INHQSQLKPGDGPIVLVLAPTR 196
QAQ WPIAM G ++V +A+TGSGKTL Y++P +H I + S++ GP +LVL+PTR
Sbjct: 185 QAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRNDSRM----GPTILVLSPTR 240
Query: 197 ELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
ELA QIQE A FG S+ + TC+YGGA KGPQ
Sbjct: 241 ELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQ 273
Score = 40 (19.1 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 133 FDRPTPIQAQGWPIAMSGSNMVGVAQT 159
+++PTP + A+S S+ V V QT
Sbjct: 46 YEKPTPSLPPKFSPAVSVSSSVQVQQT 72
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 510 (184.6 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 102/201 (50%), Positives = 144/201 (71%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLT-LSANHNIQQVVEVCAEHEKENKL 288
P RQ LM++ATWP+EV+K+A D L + +Q+NIG + L+AN I Q VEV + EKE +L
Sbjct: 611 PRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRL 670
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
+L S + +K IIF TKR D + +S+ + + AV IHGDK+Q ERD+VL +FR+
Sbjct: 671 EQILR--SQERGSKVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRS 727
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G++ +L+ATDVAARGLD+ D++ VIN+D+P EDY+HRIGRTGR+ TG ++TFFT+Q+
Sbjct: 728 GKSCVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQD 787
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
+ A DLI VL +N V P+
Sbjct: 788 WKYAPDLIKVLEGANQQVPPQ 808
Score = 358 (131.1 bits), Expect = 1.1e-82, Sum P(2) = 1.1e-82
Identities = 73/152 (48%), Positives = 99/152 (65%)
Query: 79 FHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPT 137
F SP V + SP E+ +R +H++T G N P P F + P +L+E+ GF PT
Sbjct: 402 FVTSPDVPHLSPVEI--YRKQHEVTTTGENIPAPYITFESSGLPPEILRELLSAGFPSPT 459
Query: 138 PIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRE 197
PIQAQ WPIA+ ++V +A+TGSGKTL Y++PA + + H + +GP VL+LAPTRE
Sbjct: 460 PIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRH-CRNDSRNGPTVLILAPTRE 518
Query: 198 LAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LA QIQ+ A FG S+ + TC+YGGA KGPQ
Sbjct: 519 LATQIQDEALRFGRSSRISCTCLYGGAPKGPQ 550
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 505 (182.8 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 103/200 (51%), Positives = 143/200 (71%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLT-LSANHNIQQVVEVCAEHEKENKLFG 290
RQ LM++ATWP+EV+K+A D L + Q+NIG++ L AN +I Q +EV A EK ++L
Sbjct: 407 RQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQ 466
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSI-QNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
+L S + +K IIF TKR D++ +++ + +G AA IHGDKSQ ERD VL +FR+G
Sbjct: 467 ILR--SQEPGSKIIIFCSTKRMCDQLARNLTRTFGAAA--IHGDKSQAERDDVLNQFRSG 522
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
R +LVATDVAARGLDV D++ V+N+D+PN EDY+HRIGRTGR+ TG +YTFF Q++
Sbjct: 523 RTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGDQDA 582
Query: 410 RQAKDLIDVLTESNHPVDPK 429
+ A DLI +L +N V P+
Sbjct: 583 KHASDLIKILEGANQKVPPQ 602
Score = 273 (101.2 bits), Expect = 2.5e-75, Sum P(2) = 2.5e-75
Identities = 54/101 (53%), Positives = 71/101 (70%)
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH---INHQSQLKPGDGPI 188
GF P+PIQAQ WPIAM ++V +A+TGSGKTL Y++P +H I++ S++ GP
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRM----GPT 303
Query: 189 VLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+LVL+PTRELA QIQ A FG S+ + C+YGGA KGPQ
Sbjct: 304 ILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQ 344
Score = 64 (27.6 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 24/80 (30%), Positives = 38/80 (47%)
Query: 81 PSPSVLNR-SPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKRQGFDRPTP 138
PS + N SP +A+ KH++T+ G P P+ F P+ +L+E F P
Sbjct: 130 PSSAAGNELSP---EAYCRKHEITVSGGQVPPPLMSFEATGLPNELLRECPN--F-MPYA 183
Query: 139 IQ-AQGWPIAMSGSNMVGVA 157
+ G A+ G+N+V A
Sbjct: 184 LSFVPGAIFALGGANVVRCA 203
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 437 (158.9 bits), Expect = 4.4e-74, Sum P(2) = 4.4e-74
Identities = 81/199 (40%), Positives = 137/199 (68%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEH-EKENK 287
+PDRQ +M SATWP V++LA+ ++ + IQ+ +GSL L+A H+++Q++++ + +K N
Sbjct: 459 RPDRQTIMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNT 518
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
+ + ++SS D K IIF K + D ++ + G+ IHG++ Q +R+ + + +
Sbjct: 519 ITSFVKNMSSTD--KIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIK 576
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G ILVATDVA+RGLD++D+ VIN+D+P+N E+Y+HR+GRTGR+ GTS +FFT++
Sbjct: 577 SGVVRILVATDVASRGLDIEDITHVINYDFPHNIEEYVHRVGRTGRAGRQGTSISFFTRE 636
Query: 408 NSRQAKDLIDVLTESNHPV 426
+ AK+LI++L E+ V
Sbjct: 637 DWAMAKELIEILQEAEQEV 655
Score = 339 (124.4 bits), Expect = 4.4e-74, Sum P(2) = 4.4e-74
Identities = 72/183 (39%), Positives = 113/183 (61%)
Query: 62 ALRAIDWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKH-QMTL-------KGNA----P 109
A A W PP KNF+ +P V N + E++ R+++ ++T+ +G P
Sbjct: 219 AATAARWSKCPPLTKNFYKEAPEVANLTKSEIERIREENNKITVSYVFEPKEGETSPPIP 278
Query: 110 NPITEFAE--ANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAY 167
NP+ F + A +PD +L+E+ + GF +P+PIQ+Q WPI + G +M+G+AQTG+GKTLA+
Sbjct: 279 NPVWTFEQCFAEYPD-MLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAF 337
Query: 168 MLPAIVHINHQSQLK-PGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASK 226
+LP ++H +QS + G VLVLAPTRELA QI+ + + S +++ CVYGG ++
Sbjct: 338 LLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKY-SFRGMKAVCVYGGGNR 396
Query: 227 GPQ 229
Q
Sbjct: 397 NMQ 399
Score = 37 (18.1 bits), Expect = 2.7e-42, Sum P(2) = 2.7e-42
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 203 QEVARDFGSSTYLRSTCVYGGASKGPQPDR 232
+ + RD S Y YGG +G + R
Sbjct: 30 RSIRRDGNSRAYKGDRNDYGGEGRGYRAKR 59
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 473 (171.6 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
Identities = 89/196 (45%), Positives = 135/196 (68%)
Query: 232 RQVLMWSATWPREVQKLAEDFLD-SYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
RQ++M+SATWP +V KLA++F+D + I++ IGS+ L+ANH++ Q++EV E ++ +L
Sbjct: 297 RQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIA 356
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL +N+ ++FA K + +++ + +Q GW AV IHG+K+Q ER L F+ G
Sbjct: 357 LLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGS 416
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ DV+ VIN+ +P +EDY+HRIGRTGR+ G ++TFFT N
Sbjct: 417 CPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKGVAHTFFTPLNKG 476
Query: 411 QAKDLIDVLTESNHPV 426
A +L++VL E+ V
Sbjct: 477 LAGELVNVLREAGQVV 492
Score = 290 (107.1 bits), Expect = 9.7e-74, Sum P(2) = 9.7e-74
Identities = 60/120 (50%), Positives = 84/120 (70%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
FAE+N P+ VL K F++P+PIQ+ WP + G +++G+A+TGSGKTLA+ +PAI+H
Sbjct: 118 FAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMH 175
Query: 175 INHQSQLKPGDG-----PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ +++ K G G P LVL+PTRELA QI +V R+ G L+S CVYGG+SKGPQ
Sbjct: 176 VLKKNK-KIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQ 234
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 413 (150.4 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 81/198 (40%), Positives = 127/198 (64%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M SATWP V++LA+ +L + + +G+L L+A + +QQ V E EK++ +
Sbjct: 454 RPDRQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYV 513
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
F ++ + D K +IF K K D ++ + G A +HGD+ Q +R+ L++F++
Sbjct: 514 FDFIHRMEPLD--KVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKD 571
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
GR ILVATD+A+RGLDV D+ V N+D+P N E+Y+HR+GRTGR+ +G S T T+++
Sbjct: 572 GRVRILVATDLASRGLDVHDITHVFNYDFPRNVEEYVHRVGRTGRAGRSGESVTLVTRED 631
Query: 409 SRQAKDLIDVLTESNHPV 426
R A +LI +L S V
Sbjct: 632 WRVAAELITILERSGQDV 649
Score = 331 (121.6 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 69/176 (39%), Positives = 106/176 (60%)
Query: 65 AIDWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTL--------KGNAPNPITEFA 116
A+ W +LP +KNF+ + SV RS EV+ +R ++ K PNP+ F
Sbjct: 221 AMKWQDLPVLKKNFYIEAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFE 280
Query: 117 EANFPDY--VLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
EA F Y +++ + R GF +PTPIQ+Q WP+ ++G +++G+AQTG+GKTLAY+LP +H
Sbjct: 281 EA-FAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLPGFIH 339
Query: 175 INHQSQLKPG-DGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
++ Q + +GP +LVL PTRELA QI+ + + +S C+YGG + Q
Sbjct: 340 MDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKYSYKGF-KSICIYGGGDRNAQ 394
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 404 (147.3 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 80/198 (40%), Positives = 123/198 (62%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M SATWP V +LA+ +L + + +G+L L A +++Q + V E EK + +
Sbjct: 418 RPDRQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHM 477
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L +SS D K I+F K D ++ + + +HGD+ Q++R+ L+ F+
Sbjct: 478 QTFLQSMSSTD--KVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKT 535
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+ IL+ATD+A+RGLDV DV V NFD+P N E+Y+HRIGRTGR+ TG S T T+ +
Sbjct: 536 GKVRILIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRND 595
Query: 409 SRQAKDLIDVLTESNHPV 426
R A +LI++L +N +
Sbjct: 596 WRVASELINILERANQSI 613
Score = 316 (116.3 bits), Expect = 2.9e-68, Sum P(2) = 2.9e-68
Identities = 71/173 (41%), Positives = 105/173 (60%)
Query: 68 WGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKH-QMT---LKGNA----PNPITEFAEAN 119
W +LPP +KNF+ S + S E ++R ++ +T LK PNP F +A
Sbjct: 188 WADLPPIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAF 247
Query: 120 --FPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINH 177
+P+ V++ +K+ GF +PTPIQ+Q WPI + G +++GVAQTG+GKTL Y++P +H+
Sbjct: 248 QCYPE-VMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVL 306
Query: 178 QSQLK-PGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
Q LK + P +LVL PTRELA Q++ + S LRS CVYGG ++ Q
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKY-SYKGLRSVCVYGGGNRDEQ 358
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 395 (144.1 bits), Expect = 7.4e-68, Sum P(2) = 7.4e-68
Identities = 78/198 (39%), Positives = 122/198 (61%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M SATWP V++LA+ +L + + +G+L L A + Q + V E EK + +
Sbjct: 417 RPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRSHI 476
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
++ +S KD K IIF K D ++ + + +HG++ Q +R+ LK F+
Sbjct: 477 QAFIDSMSPKD--KVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKT 534
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+ IL+ATD+A+RGLDV DV V N+D+P N E+Y+HR+GRTGR+ TG S T T+ +
Sbjct: 535 GKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRND 594
Query: 409 SRQAKDLIDVLTESNHPV 426
+ A +LI++L +N V
Sbjct: 595 WKIAGELINILERANQSV 612
Score = 322 (118.4 bits), Expect = 7.4e-68, Sum P(2) = 7.4e-68
Identities = 67/173 (38%), Positives = 104/173 (60%)
Query: 68 WGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTL--------KGNAPNPITEFAEAN 119
W LPP +KNF+ S + S +V +R ++ + K PNP F +A
Sbjct: 187 WAGLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDDLKDGEKRPLPNPTCNFEDAF 246
Query: 120 --FPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINH 177
+P+ V++ +++ GF +PTPIQ+Q WPI + G +++GVAQTG+GKTL+Y++P +HI+
Sbjct: 247 HCYPE-VMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHIDS 305
Query: 178 QSQLKPG-DGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
Q L+ +GP +LVL PTRELA Q+ ++ S L+S C+YGG + Q
Sbjct: 306 QPVLQRARNGPGMLVLTPTRELALQVDAECSEY-SYRGLKSVCIYGGGDRDGQ 357
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 375 (137.1 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + QQV+ V E +K KL
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVI-VIEEEKKFLKL 609
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 610 LELLGHY--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 409 SRQAKDLIDVLTESNHPVDP 428
+R A D+I L S V P
Sbjct: 728 ARYAGDIIKALELSGTAVPP 747
Score = 348 (127.6 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + S EV FR + +T+KG P PI + +
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ Q P MSG +++G+A+TGSGKT+A++LP HI Q
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 488
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 375 (137.1 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + QQV+ V E +K KL
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVI-VIEEEKKFLKL 609
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 610 LELLGHY--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 409 SRQAKDLIDVLTESNHPVDP 428
+R A D+I L S V P
Sbjct: 728 ARYAGDIIKALELSGTAVPP 747
Score = 348 (127.6 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + S EV FR + +T+KG P PI + +
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ Q P MSG +++G+A+TGSGKT+A++LP HI Q
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 488
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 375 (137.1 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + QQV+ V E +K KL
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVI-VIEEEKKFLKL 609
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 610 LELLGHY--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 409 SRQAKDLIDVLTESNHPVDP 428
+R A D+I L S V P
Sbjct: 728 ARYAGDIIKALELSGTAVPP 747
Score = 348 (127.6 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + S EV FR + +T+KG P PI + +
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ Q P MSG +++G+A+TGSGKT+A++LP HI Q
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 488
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 375 (137.1 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + QQV+ V E +K KL
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVI-VIEEEKKFLKL 609
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 610 LELLGHY--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 409 SRQAKDLIDVLTESNHPVDP 428
+R A D+I L S V P
Sbjct: 728 ARYAGDIIKALELSGTAVPP 747
Score = 348 (127.6 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + S EV FR + +T+KG P PI + +
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ Q P MSG +++G+A+TGSGKT+A++LP HI Q
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 488
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 375 (137.1 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + QQV+ V E +K KL
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVI-VIEEEKKFLKL 609
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 610 LELLGHY--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 409 SRQAKDLIDVLTESNHPVDP 428
+R A D+I L S V P
Sbjct: 728 ARYAGDIIKALELSGTAVPP 747
Score = 348 (127.6 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + S EV FR + +T+KG P PI + +
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ Q P MSG +++G+A+TGSGKT+A++LP HI Q
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 488
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 375 (137.1 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + QQV+ V E +K KL
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVI-VIEEEKKFLKL 609
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 610 LELLGHY--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 409 SRQAKDLIDVLTESNHPVDP 428
+R A D+I L S V P
Sbjct: 728 ARYAGDIIKALELSGTAVPP 747
Score = 348 (127.6 bits), Expect = 3.8e-67, Sum P(2) = 3.8e-67
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + S EV FR + +T+KG P PI + +
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ Q P MSG +++G+A+TGSGKT+A++LP HI Q
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 488
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 375 (137.1 bits), Expect = 6.1e-67, Sum P(2) = 6.1e-67
Identities = 78/200 (39%), Positives = 117/200 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + QQV+ V E +K KL
Sbjct: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVI-VIEEEKKFLKL 609
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 610 LELLGHY--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
Query: 409 SRQAKDLIDVLTESNHPVDP 428
+R A D+I L S V P
Sbjct: 728 ARYAGDIIKALELSGTAVPP 747
Score = 346 (126.9 bits), Expect = 6.1e-67, Sum P(2) = 6.1e-67
Identities = 69/171 (40%), Positives = 100/171 (58%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + S EV FR + +T+KG P PI + +
Sbjct: 318 LEPVDHGKIEYEPFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQC 377
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ Q P MSG +++G+A+TGSGKT+A++LP HI Q
Sbjct: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 488
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 382 (139.5 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 77/198 (38%), Positives = 117/198 (59%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L I++ +G ++ + +++Q V V E K KL
Sbjct: 550 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQHVIVIEEENKFLKL 608
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL K IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 609 LELLGHYQEK--GSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKN 666
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 667 GTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITEDQ 726
Query: 409 SRQAKDLIDVLTESNHPV 426
+R A D+I L S +P+
Sbjct: 727 ARYAGDIIKALELSGNPI 744
Score = 336 (123.3 bits), Expect = 1.2e-66, Sum P(2) = 1.2e-66
Identities = 66/171 (38%), Positives = 101/171 (59%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEA 118
L +D G + PF KNF+ P + + EV +R + +T+KG P PI + +
Sbjct: 317 LEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQC 376
Query: 119 NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ 178
+L +K+ G+++PTPIQ+Q P M+G +++G+A+TGSGKT+A++LP HI Q
Sbjct: 377 GISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 436
Query: 179 SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
L+ G+GPI +++ PTRELA QI + + F + LR CVYGG Q
Sbjct: 437 RALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQ 487
Score = 51 (23.0 bits), Expect = 9.6e-32, Sum P(2) = 9.6e-32
Identities = 21/78 (26%), Positives = 37/78 (47%)
Query: 261 IGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAETKRKVDKITKSI 320
I +L LS N + ++ A+ +++ K G L SS K F ET++ + K +
Sbjct: 734 IKALELSGNPIPADLEKLWADFKEQQKAEGKLIKKSSGFSGKGFKFDETEQALANERKKL 793
Query: 321 QNYGWAAVGIHGDKSQQE 338
Q AA+G+ D ++
Sbjct: 794 QK---AALGLQ-DSDDED 807
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 389 (142.0 bits), Expect = 9.0e-66, Sum P(2) = 9.0e-66
Identities = 77/198 (38%), Positives = 121/198 (61%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M SATWP V++LA+ +L + + +G+L L A ++Q + V E EK + +
Sbjct: 420 RPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRSHI 479
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
+ +S KD K IIF K D ++ + + +HG++ Q +R+ LK F+
Sbjct: 480 QTFIESMSPKD--KVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKT 537
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+ IL+ATD+A+RGLDV DV V N+D+P N E+Y+HR+GRTGR+ TG S T T+ +
Sbjct: 538 GKVRILIATDLASRGLDVHDVTHVYNYDFPRNIEEYVHRVGRTGRAGRTGVSITLITRSD 597
Query: 409 SRQAKDLIDVLTESNHPV 426
+ A +LI +L +N +
Sbjct: 598 WKIAGELIHILERANQSI 615
Score = 309 (113.8 bits), Expect = 9.0e-66, Sum P(2) = 9.0e-66
Identities = 68/176 (38%), Positives = 104/176 (59%)
Query: 68 WGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTL--------KGNAPNPITEFAEAN 119
W LP +KNF+ S + S +VQ +R ++ + K PNP +F +A
Sbjct: 187 WAGLPLIKKNFYMESEITSSMSQEQVQNWRKENYNIMCDDLKDGEKRPIPNPACKFEDAF 246
Query: 120 --FPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINH 177
+P+ V+ +K+ GF +PTPIQ+Q WPI + G +++GVAQTG+GKTL+Y++P +H++
Sbjct: 247 QCYPE-VMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMPGFIHVDS 305
Query: 178 Q----SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
Q S + +GP +LVL PTRELA Q++ + S L+S CVYGG + Q
Sbjct: 306 QPVVFSLQRARNGPGMLVLTPTRELALQVEAECSKY-SYKGLKSVCVYGGGDRDGQ 360
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 390 (142.3 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 74/198 (37%), Positives = 127/198 (64%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+P+RQ +++SAT+PR+V+ LA L+ ++I +G ++ N +I Q+VEV E ++ +L
Sbjct: 708 RPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPESDRFLRL 766
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL + S K K ++F +++ K D + + + + + +HG K Q +R+ + +F+N
Sbjct: 767 LELLGEWSEK--GKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKN 824
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
+L+AT VAARGLDV +++ V+NFD PN+ EDY+HR+GRTGR+ G + TF ++ +
Sbjct: 825 DVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDD 884
Query: 409 SRQAKDLIDVLTESNHPV 426
++ A DL+ L S PV
Sbjct: 885 AKYAPDLVKALELSEQPV 902
Score = 311 (114.5 bits), Expect = 1.2e-64, Sum P(2) = 1.2e-64
Identities = 63/158 (39%), Positives = 91/158 (57%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQ 131
PF KNF+ + + EV +R + ++ + G + P PI + + +L +K+
Sbjct: 488 PFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKL 547
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLV 191
+++P PIQ Q PI MSG + +GVA+TGSGKTL ++LP + HI Q ++ GDGPI LV
Sbjct: 548 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 607
Query: 192 LAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+APTREL QQI R F +R VYGG+ Q
Sbjct: 608 MAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQ 645
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 392 (143.0 bits), Expect = 9.6e-64, Sum P(2) = 9.6e-64
Identities = 74/202 (36%), Positives = 125/202 (61%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +++SAT+PR ++ LA L ++I +G ++ A+ ++Q+VEV E K ++L
Sbjct: 597 RPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASE-VEQIVEVRPEESKFSRL 655
Query: 289 FGLLNDISSKD-ENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
LL ++ + + +T++F + + D + + G+ + IHG K Q +RD + +++
Sbjct: 656 LELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYK 715
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
G +L+AT V ARGLDV ++ V+N+D PN+ EDY+HR+GRTGR+ +TG + TF T +
Sbjct: 716 AGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITPE 775
Query: 408 NSRQAKDLIDVLTESNHPVDPK 429
+ A D+ L S PV PK
Sbjct: 776 QEKYAVDIAKALKMSKQPV-PK 796
Score = 298 (110.0 bits), Expect = 9.6e-64, Sum P(2) = 9.6e-64
Identities = 60/157 (38%), Positives = 91/157 (57%)
Query: 70 NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQ-MTLKG-NAPNPITEFAEANFPDYVLKE 127
N F+K+F+ + N SP EV R + ++G + P P+T +++ +
Sbjct: 373 NYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPVTSWSQCGLSAQTISV 432
Query: 128 VKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGP 187
+ G+++PT IQAQ P SG +++GVA+TGSGKT+A++LP HI Q LK G+GP
Sbjct: 433 INSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLKTGEGP 492
Query: 188 IVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGA 224
I +++ PTRELA QI + F +R+ C YGGA
Sbjct: 493 IAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGA 529
Score = 45 (20.9 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
Identities = 21/81 (25%), Positives = 36/81 (44%)
Query: 242 PREVQKLAEDFLDSYIQINIGSLTLSAN----HNIQQVVEVC-AEHEKENKLFGLLNDIS 296
P+E+Q LA FL+ ++ G + + ++ E AE + + K +G
Sbjct: 795 PKELQTLASQFLE---KVKAGKEKAAGGGFGGKGLSRLDETRNAERKMQRKAYG------ 845
Query: 297 SKDENKTIIFAETKRKVDKIT 317
+DE AE K ++KIT
Sbjct: 846 -EDEEDVETEAEAKSPLEKIT 865
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 362 (132.5 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 73/198 (36%), Positives = 116/198 (58%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR ++ LA L +++ +G ++ + +++Q V V E +K KL
Sbjct: 536 RPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCS-DVEQHVIVIEEEKKFLKL 594
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
+L K IIF + + D + K + + + +HG Q +RD ++ +F+N
Sbjct: 595 LEILGHYQEK--GSVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKN 652
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVAT VAARGLDV + V+N+ PN+ EDY+HR GRTGR+ N G +YTF T+
Sbjct: 653 GACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEGQ 712
Query: 409 SRQAKDLIDVLTESNHPV 426
+R + D++ L S V
Sbjct: 713 ARYSGDILKALELSGSSV 730
Score = 326 (119.8 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 64/159 (40%), Positives = 94/159 (59%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKR 130
PF KNF+ P + SP EV +R + +++KG P PI + + VL +K+
Sbjct: 315 PFRKNFYVEVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKK 374
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
+++PTPIQAQ P MSG +++G+A+TGSGKT+A++LP HI Q + +GP+ +
Sbjct: 375 HNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAV 434
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
++ PTRELA QI + + F S LR CVYGG Q
Sbjct: 435 IMTPTRELALQITKECKKFSKSLALRVVCVYGGTGISEQ 473
Score = 48 (22.0 bits), Expect = 2.3e-30, Sum P(2) = 2.3e-30
Identities = 18/76 (23%), Positives = 35/76 (46%)
Query: 263 SLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQN 322
+L LS + ++ ++ +++ K G + SS K F ET+ + K +Q
Sbjct: 722 ALELSGSSVPAELEQLWTNFKEQQKAEGKIIKSSSGFSGKGFKFDETEHALANERKKLQK 781
Query: 323 YGWAAVGIHGDKSQQE 338
AA+G+H D ++
Sbjct: 782 ---AALGLH-DSDDED 793
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 343 (125.8 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 71/199 (35%), Positives = 118/199 (59%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M SATWP V++LA+ +L + + + +G+L L+ + VV + +K+
Sbjct: 229 RPDRQTVMMSATWPDGVRRLAKSYLRNPMIVYVGTLDLA----VSGVVLKYLQFDKDIFT 284
Query: 289 FGLLN-DISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
+ + + S + ++F + D I + G +HGD+ Q +R+ L +F+
Sbjct: 285 WKYMQVNAQSFCTDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFK 344
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
G+ ILVATD+A+RGLDV D+ V NFD+P N E+Y+HR+GRTGR+ TG + T T++
Sbjct: 345 KGKVRILVATDLASRGLDVHDITHVFNFDFPRNIEEYVHRVGRTGRAGRTGKAVTLITKK 404
Query: 408 NSRQAKDLIDVLTESNHPV 426
+ + A +LID+L + V
Sbjct: 405 DWKAASELIDILQRAKQVV 423
Score = 322 (118.4 bits), Expect = 2.0e-63, Sum P(2) = 2.0e-63
Identities = 68/173 (39%), Positives = 105/173 (60%)
Query: 70 NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTL-----KGNA---PNPITEFAEA--N 119
+LPP EKNF+ S SP EV+ +R ++ + +G PNP+ +F +
Sbjct: 1 DLPPIEKNFYKESSRTACMSPEEVELWRKENNNIICDDLKEGEKRCIPNPVCKFEDVFEQ 60
Query: 120 FPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQS 179
+PD ++ +++ GF +PTPIQ+Q WPI + G +++G+AQTG+GKTLAY++P +H+ S
Sbjct: 61 YPD-IMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHL--AS 117
Query: 180 QLKPGD---GPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
Q P D GP +LVLAPTRELA Q++ + + +S C+YGG + Q
Sbjct: 118 QPIPKDKRGGPGMLVLAPTRELALQVEAECLKYTYKGF-KSICIYGGGDRKAQ 169
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 362 (132.5 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 79/203 (38%), Positives = 122/203 (60%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ L++SAT P +V+KLA + L I++ +G + + AN +I QVV V + KL
Sbjct: 404 RPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGM-ANEDITQVVNVIPSDAE--KL 460
Query: 289 FGLLNDISSK-DENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
LL + DE ++FA K VD+I + + +HGDK Q R L++F+
Sbjct: 461 PWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFK 520
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRS-DNTGTSYTFFTQ 406
+G +L+ATDVAARGLD+ +K V+N+D + + ++HRIGRTGR+ D G +YT TQ
Sbjct: 521 SGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQ 580
Query: 407 QNSRQAKDLIDVLTESNHPVDPK 429
+ +R A +L++ L + V P+
Sbjct: 581 REARFAGELVNSLVAAGQNVPPE 603
Score = 312 (114.9 bits), Expect = 1.5e-62, Sum P(2) = 1.5e-62
Identities = 63/170 (37%), Positives = 101/170 (59%)
Query: 63 LRAIDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEAN 119
+ A+D ++ P K+F+ S+ + E +R + + + G + P+ F +
Sbjct: 175 ITALDHSSIDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCG 234
Query: 120 FPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQS 179
F ++ +K+Q +++PT IQ Q PI +SG +++G+A+TGSGKT A++LP IVHI Q
Sbjct: 235 FSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQP 294
Query: 180 QLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+L+ +GPI ++ APTRELA QI A+ F + LR + VYGG SK Q
Sbjct: 295 ELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQ 344
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 407 (148.3 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 77/202 (38%), Positives = 128/202 (63%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +++SAT P+ + L + L + ++I +G ++ A+ I Q+VE+ E K N+L
Sbjct: 557 RPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASE-ITQIVEIRDEKSKFNRL 615
Query: 289 FGLLNDISSKDEN-KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
LL ++ D++ +++IF E + K D++ + + G+ + +HG K Q +RD + +F+
Sbjct: 616 LELLGELYKDDDDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRDSTISDFK 675
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G +++AT VAARGLDV +K V+N+D PN+ EDY+HR GRTGR+ NTGT+ TF T++
Sbjct: 676 SGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTEE 735
Query: 408 NSRQAKDLIDVLTESNHPVDPK 429
A + L +S PV K
Sbjct: 736 QENCAIGIAKALEQSGQPVPEK 757
Score = 271 (100.5 bits), Expect = 1.6e-62, Sum P(2) = 1.6e-62
Identities = 61/162 (37%), Positives = 91/162 (56%)
Query: 66 IDWGNLP--PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKG-NAPNPITEFAEANFP 121
ID+ L P KNF+ + + EV R + + + G + P P+ +++
Sbjct: 327 IDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDVPKPVQKWSLCGLT 386
Query: 122 DYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQL 181
+L + + +D+PT IQ Q P+ MSG ++VGVA+TGSGKT+A++LP HI Q +
Sbjct: 387 RPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFLLPMFRHIKDQEPV 446
Query: 182 KPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
K +GPI L+L PTRELA QI + F + LR+ C YGG
Sbjct: 447 KDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGG 488
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 415 (151.1 bits), Expect = 2.2e-62, Sum P(2) = 2.2e-62
Identities = 83/201 (41%), Positives = 127/201 (63%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +++SAT+PR ++ LA L I+I +G ++ A I Q+VEVC E +K +L
Sbjct: 720 RPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSVVAPE-ITQIVEVCNEEKKFVRL 778
Query: 289 FGLLNDISSKDEN---KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
LL ++ S DEN +++IF + + D + + + G+ + IHG K Q +RD +++
Sbjct: 779 LELLGNLYSTDENEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIED 838
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
F+ G +L+AT VAARGLDV +K V+N+D PN+ EDY+HR GRTGR+ NTGT+ TF T
Sbjct: 839 FKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLT 898
Query: 406 QQNSRQAKDLIDVLTESNHPV 426
+ R + D+ L +S V
Sbjct: 899 EDQERYSVDIAKALKQSGQEV 919
Score = 264 (98.0 bits), Expect = 2.2e-62, Sum P(2) = 2.2e-62
Identities = 56/154 (36%), Positives = 87/154 (56%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKR 130
PF + F+ + S E R + + ++G + P P+ ++++ L + +
Sbjct: 499 PFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQKWSQCGLGIQTLDVIDK 558
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
GF T IQAQ P MSG +++GVA+TGSGKT+A+++P HI Q L+ +GPI L
Sbjct: 559 LGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHIKDQRPLENMEGPIGL 618
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGA 224
++ PTRELA QI + + F + LR+ C YGGA
Sbjct: 619 IMTPTRELATQIHKDCKPFLKALNLRAVCAYGGA 652
Score = 38 (18.4 bits), Expect = 1.2e-19, Sum P(2) = 1.2e-19
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 242 PREVQKLAEDFLD 254
P VQKL + FL+
Sbjct: 920 PEAVQKLVDSFLE 932
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 385 (140.6 bits), Expect = 2.6e-62, Sum P(2) = 2.6e-62
Identities = 83/196 (42%), Positives = 123/196 (62%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVC-AEHEKENK 287
+PDRQVL WSATWP++V AE + + I++ IGS L+AN NI Q ++ + +K +
Sbjct: 315 RPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDADKVDA 374
Query: 288 LFGLLNDISSKDEN-KTIIFAETKRKVDKITKSIQNYGW-AAVG-IHGDKSQQERDYVLK 344
L L +I S DE +T+IF TK+ D + IQ+ G + +HGD Q R+ +++
Sbjct: 375 LMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRRERIVQ 434
Query: 345 EFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFF 404
+F+N R I+VATDVA+RGLD+ + VINF P++ E Y+HRIGRTGR+ GTS++
Sbjct: 435 DFKNKRLDIVVATDVASRGLDIKGISHVINFSLPSDCETYVHRIGRTGRAGALGTSHSIL 494
Query: 405 TQQNSRQAKDLIDVLT 420
+ NS +L+ LT
Sbjct: 495 SN-NSLDDMELVGDLT 509
Score = 273 (101.2 bits), Expect = 2.6e-62, Sum P(2) = 2.6e-62
Identities = 66/178 (37%), Positives = 96/178 (53%)
Query: 60 GGALRAIDWG----NLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLK--GN--APNP 111
G R I+W N+ P K P+ E F + ++++K N P P
Sbjct: 83 GNKKREINWDDELKNMAPIRKRLID-LPT---EDQQETMDFIKEFEISIKKENNFYLPKP 138
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
I F +K + F++PTP+Q+ GWPIA+SGS+M+G+++TGSGKTL+++LPA
Sbjct: 139 IDTIESVPFQS-TIKNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKTLSFILPA 197
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
I HI Q + GP VLV+APTRELA QI + A + + +YGGA + Q
Sbjct: 198 IEHILAQPRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGGAPRRSQ 255
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 447 (162.4 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 349 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEELDKRSF 407
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 408 LLDLLN-ATGKD-SLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFR 465
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 466 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 525
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 526 NINITKDLLDLLVEAKQEV 544
Score = 207 (77.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 61/181 (33%), Positives = 86/181 (47%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F S + +N + + D N P I F++ + +
Sbjct: 111 DWSKPLPPSERLEQELFSGSNTGIN-----FEKYDDIPVEATGSNCPPHIESFSDVDMGE 165
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 166 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGD 225
Query: 181 ----LKPGDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGP 228
+K +G PI LVLAPTRELA QI E AR F + +R VYGGA G
Sbjct: 226 ALRAMKATNGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQ 285
Query: 229 Q 229
Q
Sbjct: 286 Q 286
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 364 (133.2 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 79/202 (39%), Positives = 126/202 (62%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVC-AEHEKENK 287
+PDRQ L++SAT+ V++ A L I+I+IG + SAN +I Q+V+V ++ +K N
Sbjct: 481 RPDRQTLLFSATFKPNVEEFARTILSDPIKISIGMIG-SANSDITQIVQVLKSDSDKWNW 539
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L L + S + +IF TK V++++ ++ +G+ +HGDK+Q ER ++ F+
Sbjct: 540 LTNQLALLLS--QGSVLIFVSTKVAVEQLSSNLTKFGFQTCTLHGDKNQIERSQTIQTFK 597
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
G+ IL+ATDVAARGLD+ +K V+N+D + E + HRIGRTGR+ NTG +YT T +
Sbjct: 598 EGKINILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITPK 657
Query: 408 NSRQAKDLIDVLTESNHPVDPK 429
+ + DLI L ++ V P+
Sbjct: 658 DIHFSVDLIKNLESASQFVPPE 679
Score = 312 (114.9 bits), Expect = 3.0e-62, Sum P(2) = 3.0e-62
Identities = 64/157 (40%), Positives = 91/157 (57%)
Query: 74 FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQG 132
F K F+ P + N + +V R + + G + NP+T F F D +L+ + +Q
Sbjct: 265 FNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQS 324
Query: 133 FDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVL 192
+ PTPIQ Q PIA+SG +++ +A+TGSGKT ++ P+I HI Q L+ GDGPI L L
Sbjct: 325 IETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFL 384
Query: 193 APTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
APTRELA QI + L++T +YGG SK Q
Sbjct: 385 APTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQ 421
Score = 37 (18.1 bits), Expect = 8.8e-28, Sum P(2) = 8.8e-28
Identities = 7/36 (19%), Positives = 18/36 (50%)
Query: 374 NFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
N++ +N+ + + R G ++N + ++ NS
Sbjct: 859 NYNNSSNNNNNNNNNYRNGNNNNNYNNNNYYNNNNS 894
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 447 (162.4 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 350 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEELDKRSF 408
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 409 LLDLLN-ATGKD-SLTLVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFR 466
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 467 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 526
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 527 NINITKDLLDLLVEAKQEV 545
Score = 206 (77.6 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 62/183 (33%), Positives = 85/183 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F S + +N + + D N P I F++ + +
Sbjct: 113 DWSKPLPPSERLEQELFSGSNTGIN-----FEKYDDIPVEATGSNCPPHIESFSDVDMGE 167
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLK 182
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 168 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADG--- 224
Query: 183 PGDG----------------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASK 226
PGD PI LVLAPTRELA QI E AR F + +R VYGGA
Sbjct: 225 PGDALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADI 284
Query: 227 GPQ 229
G Q
Sbjct: 285 GQQ 287
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 348 (127.6 bits), Expect = 8.8e-62, Sum P(2) = 8.8e-62
Identities = 69/188 (36%), Positives = 114/188 (60%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+PR+++ LA L I++ +G ++ ++Q V + + K KL
Sbjct: 689 RPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKE-VEQHVVILNDDAKFFKL 747
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL ++ I+F + + D + + + + + +HG Q +RD + +F++
Sbjct: 748 LELLGIY--QEAGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKS 805
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G+ +L+AT VAARGLDV D+ V+N+D PN+ EDY+HR GRTGR+ G++YTF T +
Sbjct: 806 GKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYTFITPEQ 865
Query: 409 SRQAKDLI 416
SR A D+I
Sbjct: 866 SRYAGDII 873
Score = 327 (120.2 bits), Expect = 8.8e-62, Sum P(2) = 8.8e-62
Identities = 66/159 (41%), Positives = 95/159 (59%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFR-DKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKR 130
PF KNF+ P + + +V+ +R D + +KG P PI +A+ ++ ++R
Sbjct: 468 PFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMEVLRR 527
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
GF++PTPIQ Q P MSG +++G+A+TGSGKTLA++LP HI Q ++ GDG I +
Sbjct: 528 LGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGAIAI 587
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
++APTREL QI + R F S LR CVYGG Q
Sbjct: 588 IMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQ 626
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 453 (164.5 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 92/199 (46%), Positives = 135/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 372 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSF 430
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 431 LLDLLN-ATGKD-SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 489 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 548
Query: 408 NSRQAKDLIDVLTESNHPV 426
N+ KDL+D+L E+ V
Sbjct: 549 NANITKDLLDLLVEAKQEV 567
Score = 198 (74.8 bits), Expect = 1.2e-61, Sum P(2) = 1.2e-61
Identities = 60/180 (33%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 135 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 189
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 190 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGE 249
Query: 181 ----LKPGD--G-----PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+K G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 250 ALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 309
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 360 (131.8 bits), Expect = 1.4e-61, Sum P(2) = 1.4e-61
Identities = 72/198 (36%), Positives = 120/198 (60%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SAT+P +V+ +A+ L+ ++I G ++ ++ +I+Q VEV + +L
Sbjct: 688 RPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSS-DIEQFVEVRPTETRFRRL 746
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL+ K + +IF + D + + + N + + +HG K Q +RD + +F+N
Sbjct: 747 IELLSIWYHKGQ--ILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKN 804
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
IL+AT +A+RGLD+ D+ V+NFD P++ EDY+HR+GRTGR+ N GT+YTF T
Sbjct: 805 KVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITPDE 864
Query: 409 SRQAKDLIDVLTESNHPV 426
R + +I L +S V
Sbjct: 865 ERFSSSIIKALEQSGSKV 882
Score = 312 (114.9 bits), Expect = 1.4e-61, Sum P(2) = 1.4e-61
Identities = 66/157 (42%), Positives = 97/157 (61%)
Query: 74 FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQG 132
F+KNF+ P + N + EV FR + + + G + P PI +A+A + V +K+
Sbjct: 469 FQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQ 528
Query: 133 FDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVL 192
+++PT IQAQ P M+G +++G+A+TGSGKTLA++LP HI Q + PG+G I L++
Sbjct: 529 YEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPGEGMIALIM 588
Query: 193 APTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+PTRELA QI + F LR+ CVYGGAS Q
Sbjct: 589 SPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQ 625
Score = 38 (18.4 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 281 EHEKENKLFGLLNDISSKDENK 302
E +++ K +G+ + +DE+K
Sbjct: 928 ERKQQRKAYGIEEEEEEEDEDK 949
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 457 (165.9 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 91/199 (45%), Positives = 133/199 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 414 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSF 472
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN S ++ T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 473 LLDLLNATESGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 532
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 533 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 592
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 593 NINITKDLLDLLVEAKQEV 611
Score = 198 (74.8 bits), Expect = 1.5e-61, Sum P(2) = 1.5e-61
Identities = 60/180 (33%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 177 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 231
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 232 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGE 291
Query: 181 ----LKPGD--G-----PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+K G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 292 ALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 351
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 359 (131.4 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 78/201 (38%), Positives = 120/201 (59%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNI-QQVVEV--CAEHEKENK 287
+RQ LM+SATWP+EV+ LA FL I+I +GS L+ + N+ Q +V + ++ + ++
Sbjct: 287 ERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDLSDLQSDDL 346
Query: 288 LFGLLNDISSKDENKTII-FAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKE 345
++ +N I + D T+I F K K D + ++ +H K Q+ R+ LK
Sbjct: 347 IYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRMRESGLKL 406
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
FR+ R IL+ATDVAARGLD+ VK V N+ P N EDY+HRIGRTGR+ TG ++++ T
Sbjct: 407 FRDHRIRILIATDVAARGLDIPSVKAVFNYRLPGNIEDYVHRIGRTGRAGKTGDAWSYVT 466
Query: 406 QQNSRQAKDLIDVLTESNHPV 426
Q +DL+ +L +N +
Sbjct: 467 TQTPN-LRDLVKILQRTNQKI 486
Score = 295 (108.9 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 65/141 (46%), Positives = 91/141 (64%)
Query: 89 SPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIA 147
SP E +R KH + ++G + PNP +F + FP + + + QGF PT IQ Q WPI
Sbjct: 90 SPTE---WRKKHNVLIEGKSQPNPFQKFTDYEFPR-MFQHIF-QGFTAPTVIQGQSWPII 144
Query: 148 MSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDG--PIVLVLAPTRELAQQIQEV 205
+ G+++VG+A TGSGKTLA++LPA++ I + +P G P+VLV+APTRELAQQI+EV
Sbjct: 145 LGGNDLVGLAATGSGKTLAFLLPALLKIISLPK-RPSYGATPLVLVMAPTRELAQQIEEV 203
Query: 206 ARDFGSSTYLRSTCVYGGASK 226
+ T +R C YGG K
Sbjct: 204 CKTSIRGTSIRQLCAYGGLGK 224
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 450 (163.5 bits), Expect = 2.9e-61, Sum P(2) = 2.9e-61
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 371 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSF 429
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 430 LLDLLN-ATGKD-SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 487
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 488 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 547
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 548 NINITKDLLDLLVEAKQEV 566
Score = 198 (74.8 bits), Expect = 2.9e-61, Sum P(2) = 2.9e-61
Identities = 60/180 (33%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 134 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 188
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 189 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGE 248
Query: 181 ----LKPGD--G-----PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+K G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 249 ALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 308
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 450 (163.5 bits), Expect = 3.0e-61, Sum P(2) = 3.0e-61
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 372 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSF 430
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 431 LLDLLN-ATGKD-SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 489 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 548
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 549 NINITKDLLDLLVEAKQEV 567
Score = 198 (74.8 bits), Expect = 3.0e-61, Sum P(2) = 3.0e-61
Identities = 60/180 (33%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 135 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 189
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 190 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGE 249
Query: 181 ----LKPGD--G-----PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+K G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 250 ALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 309
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 450 (163.5 bits), Expect = 3.0e-61, Sum P(2) = 3.0e-61
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 372 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSF 430
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 431 LLDLLN-ATGKD-SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 489 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 548
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 549 NINITKDLLDLLVEAKQEV 567
Score = 198 (74.8 bits), Expect = 3.0e-61, Sum P(2) = 3.0e-61
Identities = 60/180 (33%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 135 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 189
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 190 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGE 249
Query: 181 ----LKPGD--G-----PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+K G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 250 ALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 309
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 432 (157.1 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 91/206 (44%), Positives = 133/206 (64%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSY--IQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
++Q+L +ATWP +V+KLA DF SY ++I IG L+AN NI+Q V + + + + KL
Sbjct: 532 NKQLLFLTATWPEQVRKLAYDFC-SYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKL 590
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L + + + NK +IF +TKR D + K ++ + + A+ IHGDK Q+ERD +L ++
Sbjct: 591 LDWLKE--NYENNKILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKT 648
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ-- 406
R ILVATDVA+RGLD+ ++ VIN+D PN EDYIHRIGRTGR+ G S FF+
Sbjct: 649 DRCNILVATDVASRGLDIKNISVVINYDIPNTIEDYIHRIGRTGRAGKKGKSILFFSYDY 708
Query: 407 ---QNSRQAKDLIDVLTESNHPVDPK 429
Q + AK+LI +L ++N V P+
Sbjct: 709 YMPQKLKFAKELIKLLNKTNQTVPPQ 734
Score = 164 (62.8 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 89 SPHEVQAFRDKHQMTLK--GNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPI 146
S ++Q K+ + + G N I +F++ F + +L + + F PT IQ WPI
Sbjct: 262 SKEDIQNELKKNNIYINKDGIIHNIINKFSDVCFHESILNYLNNK-FSEPTAIQKITWPI 320
Query: 147 AMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
A+SG +++GVA+TGSGKTLA++LP +HI
Sbjct: 321 ALSGKDLIGVAETGSGKTLAFVLPCFMHI 349
Score = 77 (32.2 bits), Expect = 5.3e-61, Sum P(3) = 5.3e-61
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASK 226
L+L PTREL Q+ + + F + ++S VYGG K
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPK 467
Score = 43 (20.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 379 NNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQAKDLIDVLTESNHPV 426
NNS DY + I + R+ +T T++ Q D I E N P+
Sbjct: 410 NNSYDYDYDINSSERASDTYGLILLPTRELCLQVLDEIKSF-EKNLPI 456
Score = 37 (18.1 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 9/42 (21%), Positives = 20/42 (47%)
Query: 374 NFDYPNNSEDYIHRIGRTGRSDNTGTSYTF-FTQQNSRQAKD 414
N++ N++ + H ++N SY + + +S +A D
Sbjct: 387 NYNENNDNNENNHN-NNNNNNNNNNNSYDYDYDINSSERASD 427
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 448 (162.8 bits), Expect = 5.3e-61, Sum P(2) = 5.3e-61
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 372 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEEIDKRSF 430
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 431 LLDLLN-ATGKD-SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 489 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 548
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 549 NINITKDLLDLLVEAKQEV 567
Score = 198 (74.8 bits), Expect = 5.3e-61, Sum P(2) = 5.3e-61
Identities = 59/180 (32%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 135 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 189
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI-----NH 177
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 190 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGE 249
Query: 178 QSQLKPGDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ +G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 250 ALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQ 309
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 448 (162.8 bits), Expect = 5.3e-61, Sum P(2) = 5.3e-61
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 372 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEEIDKRSF 430
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 431 LLDLLN-ATGKD-SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 489 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 548
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 549 NINITKDLLDLLVEAKQEV 567
Score = 198 (74.8 bits), Expect = 5.3e-61, Sum P(2) = 5.3e-61
Identities = 59/180 (32%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 135 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 189
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI-----NH 177
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 190 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGE 249
Query: 178 QSQLKPGDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ +G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 250 ALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQ 309
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 353 (129.3 bits), Expect = 5.5e-61, Sum P(2) = 5.5e-61
Identities = 71/184 (38%), Positives = 113/184 (61%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PD+Q +++SAT+PR ++ LA LD ++I +G ++ + Q V +CAEH+K KL
Sbjct: 483 RPDKQTVLFSATFPRHMEALARKVLDKPVEILVGGKSVVCSDITQNAV-ICAEHQKFLKL 541
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVG-IHGDKSQQERDYVLKEFR 347
LL +E +I+F + + K D I + G+ +V +HG Q +RD + +F+
Sbjct: 542 LELLG--MYYEEGSSIVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFK 599
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
G +LVAT VAARGLDV ++ V+N+D PN+ EDY+HR+GRTGR+ G +YTF +
Sbjct: 600 TGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPE 659
Query: 408 NSRQ 411
+ +
Sbjct: 660 HQEK 663
Score = 311 (114.5 bits), Expect = 5.5e-61, Sum P(2) = 5.5e-61
Identities = 64/158 (40%), Positives = 97/158 (61%)
Query: 74 FEKNFFHPSPSVLNRSPHEVQAFRDK-HQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQ 131
F+KNF+ + + + EV+A+R++ +T+KG + P PI +A+ ++ +K+
Sbjct: 263 FKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNVLKKF 322
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLV 191
+ +PT IQAQ P MSG +++G+A+TGSGKTLA++LP HI Q +L+ GDGPI ++
Sbjct: 323 EYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVI 382
Query: 192 LAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LAPTRELA Q + A F L+ C YGG Q
Sbjct: 383 LAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQ 420
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 366 (133.9 bits), Expect = 6.0e-61, Sum P(2) = 6.0e-61
Identities = 72/198 (36%), Positives = 119/198 (60%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M SATWP V++LA +L + + +G+L L A + ++Q + V E EK
Sbjct: 398 RPDRQTVMTSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALT 457
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
+ ++S D K I+F K D ++ G +A +HG+ Q +++ +++F++
Sbjct: 458 QEFVENMSPND--KVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKS 515
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G IL+ TD+ +RGLD++DV V N+D+P N + Y+HR+G GR+ TGTS T TQ++
Sbjct: 516 GNIKILITTDIVSRGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRD 575
Query: 409 SRQAKDLIDVLTESNHPV 426
S+ A +LI +L +N V
Sbjct: 576 SKMAGELIKILDRANQSV 593
Score = 287 (106.1 bits), Expect = 6.0e-61, Sum P(2) = 6.0e-61
Identities = 66/173 (38%), Positives = 102/173 (58%)
Query: 68 WGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKH-QMT---LKGNA----PNPITEFAEA- 118
W +LPP +KNF+ S + S +V +R ++ +T LK P P F +A
Sbjct: 168 WADLPPVKKNFYIESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAF 227
Query: 119 -NFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINH 177
+PD +LK + R G +PTPIQ+Q WPI + G +++ VAQTG+GKTL+Y++P +H++
Sbjct: 228 QQYPD-LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDS 286
Query: 178 QS-QLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
Q + +GP +LVL PTRELA ++ + S L+S C+YGG ++ Q
Sbjct: 287 QPISREQRNGPGMLVLTPTRELALHVEAECSKY-SYKGLKSICIYGGRNRNGQ 338
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 443 (161.0 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 91/199 (45%), Positives = 133/199 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 370 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEEADKRSF 428
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + ++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 429 LLDLLN-ATGKD-SLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 486
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 487 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 546
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 547 NINITKDLLDLLVEAKQEV 565
Score = 198 (74.8 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 59/180 (32%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 133 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 187
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI-----NH 177
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 188 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGE 247
Query: 178 QSQLKPGDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ +G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 248 ALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 307
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 443 (161.0 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 91/199 (45%), Positives = 133/199 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 371 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEEADKRSF 429
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + ++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 430 LLDLLN-ATGKD-SLILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 487
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 488 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 547
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 548 NINITKDLLDLLVEAKQEV 566
Score = 198 (74.8 bits), Expect = 2.1e-60, Sum P(2) = 2.1e-60
Identities = 59/180 (32%), Positives = 83/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 134 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIESFSDVEMGE 188
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI-----NH 177
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 189 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGE 248
Query: 178 QSQLKPGDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ +G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 249 ALRAMKENGKYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 308
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 437 (158.9 bits), Expect = 6.9e-60, Sum P(2) = 6.9e-60
Identities = 92/202 (45%), Positives = 134/202 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 373 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEESDKRSF 431
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 432 LLDLLN-ATGKD-SLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 489
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGT---SYTFF 404
+G++ ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF
Sbjct: 490 SGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLIGLATSFF 549
Query: 405 TQQNSRQAKDLIDVLTESNHPV 426
++N KDL+D+L E+ V
Sbjct: 550 NERNINITKDLLDLLVEAKQEV 571
Score = 201 (75.8 bits), Expect = 6.9e-60, Sum P(2) = 6.9e-60
Identities = 61/180 (33%), Positives = 84/180 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 136 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPRHIESFSDVEMGE 190
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 191 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGE 250
Query: 181 -LKP--GDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LK +G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 251 ALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 310
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 446 (162.1 bits), Expect = 8.3e-60, Sum P(2) = 8.3e-60
Identities = 90/199 (45%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 372 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEEADKRSF 430
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN ++ ++ T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 431 LLDLLN--ATGTDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +VK VINFD P + E+Y+HRIGRTGR N G + +FF ++
Sbjct: 489 SGKSPILVATAVAARGLDISNVKHVINFDLPGDIEEYVHRIGRTGRVGNLGLATSFFNER 548
Query: 408 NSRQAKDLIDVLTESNHPV 426
N +KDL+D+L E+ V
Sbjct: 549 NINISKDLLDLLVEAKQEV 567
Score = 189 (71.6 bits), Expect = 8.3e-60, Sum P(2) = 8.3e-60
Identities = 60/180 (33%), Positives = 82/180 (45%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 135 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEVTGNNCPPHIESFSDVAMGE 189
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 190 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGE 249
Query: 181 -LKP--GDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LK G PI LVLAPTRELA QI E AR F + + VYGGA G Q
Sbjct: 250 ALKAVKESGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQ 309
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 353 (129.3 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 69/158 (43%), Positives = 98/158 (62%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQ 131
PFEKNF+ + +V+ R + + G + P P+T F F + ++K V++
Sbjct: 228 PFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKA 287
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLV 191
+ +PTPIQAQ P A+SG +++G+A+TGSGKT A++ P ++H+ Q QLKPGDGPI L+
Sbjct: 288 EYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLI 347
Query: 192 LAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LAPTREL+ QI A+ FG L C YGG SK Q
Sbjct: 348 LAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQ 385
Score = 294 (108.6 bits), Expect = 1.4e-59, Sum P(2) = 1.4e-59
Identities = 68/189 (35%), Positives = 107/189 (56%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEH-EKENK 287
+PDRQ LM+SAT+ + +++LA D L ++I G L AN +I Q V V +K N
Sbjct: 445 RPDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLN-EANQDITQSVYVFPNPLQKWNW 503
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L L + + E +IF K + ++ ++ + + +HGD Q +R+ V+ +F+
Sbjct: 504 L--LCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFK 561
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
ILVATDVAARGLD+ ++ V+N+D + E + HRIGRTGR+ G +YT T +
Sbjct: 562 RKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAYTLVTDK 621
Query: 408 NSRQAKDLI 416
+ A L+
Sbjct: 622 DKEFAGHLV 630
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 434 (157.8 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 87/199 (43%), Positives = 132/199 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V + +K +
Sbjct: 367 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEDLDKRSF 425
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L +L S ++ T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 426 LLDILGATGS--DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 483
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +V+ VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 484 SGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEK 543
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 544 NMNITKDLLDLLVEAKQEV 562
Score = 199 (75.1 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 61/180 (33%), Positives = 85/180 (47%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ + +
Sbjct: 130 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGSNCPPHIENFSDIDMGE 184
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 185 IIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGE 244
Query: 181 -LKP--GDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LK +G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 245 ALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 304
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 434 (157.8 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 87/199 (43%), Positives = 132/199 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V + +K +
Sbjct: 370 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEDLDKRSF 428
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L +L S ++ T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 429 LLDILGATGS--DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 486
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +V+ VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 487 SGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEK 546
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 547 NMNITKDLLDLLVEAKQEV 565
Score = 199 (75.1 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 61/180 (33%), Positives = 85/180 (47%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ + +
Sbjct: 133 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGSNCPPHIENFSDIDMGE 187
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 188 IIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGE 247
Query: 181 -LKP--GDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LK +G PI LVLAPTRELA QI E AR F + +R VYGGA G Q
Sbjct: 248 ALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 307
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 439 (159.6 bits), Expect = 3.4e-59, Sum P(2) = 3.4e-59
Identities = 92/199 (46%), Positives = 131/199 (65%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 371 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEELDKRSF 429
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + +A IHGD+SQ++R+ L +FR
Sbjct: 430 LLDLLN-ATGKD-SLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFR 487
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+GR ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 488 SGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 547
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 548 NLNITKDLLDLLVEAKQEV 566
Score = 191 (72.3 bits), Expect = 3.4e-59, Sum P(2) = 3.4e-59
Identities = 59/175 (33%), Positives = 82/175 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 134 DWSKPLPPSERLEQELFSGGNTGIN-----FEKYDDIPVEATGNNCPPHIENFSDIEMGE 188
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSGKT A++LP + I
Sbjct: 189 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGE 248
Query: 181 -LKP--GDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGA 224
LK +G PI LVLAPTRELA QI E AR F + +R VYGGA
Sbjct: 249 ALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGA 303
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 420 (152.9 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 85/201 (42%), Positives = 131/201 (65%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ RQ +++SAT+P ++Q+LA DF+ +YI + +G + S+ I Q VE E +K +
Sbjct: 335 PRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVG-SSTDLITQRVEFVQESDKRSH 393
Query: 288 LFGLLN-DISSKDENK-TIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
L LL+ ++D+ T++F ETKR D + + + A IHGD++QQER+ L+
Sbjct: 394 LMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRS 453
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
F+ GR ILVATDVAARGLD+ V V+NFD PN+ +DY+HRIGRTGR+ +G + FF
Sbjct: 454 FKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIATAFFN 513
Query: 406 QQNSRQAKDLIDVLTESNHPV 426
+ N++ A+ L +++ E+N V
Sbjct: 514 ENNAQLARSLAELMQEANQEV 534
Score = 201 (75.8 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 46/134 (34%), Positives = 71/134 (52%)
Query: 95 AFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
A+ D T G+ P P+ FA+ + D + ++R + RPTP+Q PI ++ +++
Sbjct: 133 AYEDIPVETSGGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLM 192
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQSQLKPGDG-----PIVLVLAPTRELAQQIQEVARDF 209
AQTGSGKT A+ P I I ++ G P ++L+PTRELA QI + A+ F
Sbjct: 193 ACAQTGSGKTAAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKF 252
Query: 210 GSSTYLRSTCVYGG 223
T ++ YGG
Sbjct: 253 SYQTGVKVVVAYGG 266
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 396 (144.5 bits), Expect = 3.5e-58, Sum P(2) = 3.5e-58
Identities = 93/236 (39%), Positives = 138/236 (58%)
Query: 192 LAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDRQVLMWSATWPREVQKLAED 251
LA R L + D G +R G P+ R M+SAT+P+E+Q LA+D
Sbjct: 295 LAGCRYLVLDEADRMLDMGFEPQIRKIV---GQGMPPKTARTTAMFSATFPKEIQVLAKD 351
Query: 252 FL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAETK 310
FL D+YI + +G + S + NI+Q + E EK + L +L ++ EN ++F ETK
Sbjct: 352 FLKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNLMEIL--MNEHSENLVLVFVETK 408
Query: 311 RKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGILVATDVAARGLDVDDVK 370
R +++ + +V IHGD Q ER+ L+ FR+G+ ILVAT VAARGLD+ +V+
Sbjct: 409 RGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAARGLDIPNVR 468
Query: 371 FVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQAKDLIDVLTESNHPV 426
VIN+D P +S++Y+HRIGRTGR N G + +FF +N +DL +++ ESN V
Sbjct: 469 HVINYDLPGDSDEYVHRIGRTGRCGNLGIATSFFNDKNRGIGRDLKNLIVESNQEV 524
Score = 230 (86.0 bits), Expect = 3.5e-58, Sum P(2) = 3.5e-58
Identities = 60/169 (35%), Positives = 88/169 (52%)
Query: 68 WGNLPP--FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYV 124
WG P E N FH + S +N +E + + G++ P I F EA F V
Sbjct: 97 WGGAPAEYSESNLFHRTDSGINFDKYE------NIPVEVSGDSVPAAIEHFNEAGFGPAV 150
Query: 125 LKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI--NHQSQLK 182
++ V R G+ +PTP+Q P ++ +++ AQTGSGKT A++LP I HI +K
Sbjct: 151 MENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVK 210
Query: 183 PG---DG-----PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
P +G P LVL+PTRELA QI + A F + +++ +YGG
Sbjct: 211 PPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 259
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 436 (158.5 bits), Expect = 3.6e-58, Sum P(2) = 3.6e-58
Identities = 91/199 (45%), Positives = 131/199 (65%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V E +K +
Sbjct: 365 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEELDKRSF 423
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + +D + T++F ETK+ D + + +A IHGD+SQ++R+ L +FR
Sbjct: 424 LLDLLN-ATGRD-SLTLVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFR 481
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+GR ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 482 SGRKPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNER 541
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 542 NLNITKDLLDLLVEAKQEV 560
Score = 184 (69.8 bits), Expect = 3.6e-58, Sum P(2) = 3.6e-58
Identities = 58/175 (33%), Positives = 81/175 (46%)
Query: 67 DWGN-LPP---FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPD 122
DW LPP E+ F + +N + + D N P I F++ +
Sbjct: 128 DWSKPLPPSERLEQELFSGGNAGIN-----FEKYDDIPVEATGNNCPPHIENFSDVEMGE 182
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-- 180
++ ++ + RPTP+Q PI +++ AQTGSG T A++LP + I
Sbjct: 183 IIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGCTAAFLLPILSQIYTDGPGE 242
Query: 181 -LKP--GDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGA 224
LK +G PI LVLAPTRELA QI E AR F + +R VYGGA
Sbjct: 243 ALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGA 297
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 408 (148.7 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 88/202 (43%), Positives = 123/202 (60%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIG---SLTLSANHNIQQVVEVCAEHEK 284
P RQ +M++ATWP V+ LA F+ S + + IG S AN I+QVVEV HEK
Sbjct: 248 PVSKRQTVMFTATWPPIVRNLASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEK 307
Query: 285 ENKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLK 344
E +L +LN +K + F K++ ++ + ++ G+ GIHGD SQQER L+
Sbjct: 308 EQRLVQILNRHQRGTPDKVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLE 367
Query: 345 EFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFF 404
F++G A +LVATDVAARGLD+ VK V+N +P EDY+HRIGRTGR+ G + T F
Sbjct: 368 AFKSGAATVLVATDVAARGLDIPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLF 427
Query: 405 TQQNSRQAKDLIDVLTESNHPV 426
T+ + Q+ LI+VL +N V
Sbjct: 428 TETDKAQSGALINVLKAANQEV 449
Score = 207 (77.9 bits), Expect = 3.8e-58, Sum P(2) = 3.8e-58
Identities = 50/165 (30%), Positives = 84/165 (50%)
Query: 79 FHPSPSVLNRSPHEVQAFRDKHQMTLK-GNAPNP-ITEFAEANFPDYVLKEVKR--QGFD 134
+ SP++ N E+ F H + + +A P + +F K++ GF
Sbjct: 35 YFQSPALDNVPQTEIDKFLSDHSIKITDASADKPSLRPIISFSFLPPSNKDLYAPLDGFA 94
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAP 194
PT IQ+ WP+ +G +++G+A+TGSGKTLA+ LP + + + P+ +V++P
Sbjct: 95 SPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISP 154
Query: 195 TRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDRQVLMWSA 239
TRELA QI + F ++ C++GG K Q R+ L +A
Sbjct: 155 TRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ--REALKSAA 197
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 356 (130.4 bits), Expect = 4.4e-58, Sum P(2) = 4.4e-58
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 227 GPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
G RQ +M++AT P V++LA +L + IGS + ++Q V + +E EK
Sbjct: 582 GKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVILMSEGEKRK 640
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
KL +L +S E IIF K+ D + KS++ G+ A +HG K Q++R++ L
Sbjct: 641 KLLEVL---ASGFEPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNL 697
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
+ G ILVATDVA RG+D+ DV V+N+D N EDYIHRIGRTGR+ +G + TF T+
Sbjct: 698 KAGAKDILVATDVAGRGIDIQDVSMVLNYDMAKNIEDYIHRIGRTGRAGKSGVAMTFLTK 757
Query: 407 QNSRQAKDLIDVLTES 422
++S DL + ES
Sbjct: 758 EDSSVFYDLKQAILES 773
Score = 277 (102.6 bits), Expect = 4.4e-58, Sum P(2) = 4.4e-58
Identities = 57/139 (41%), Positives = 87/139 (62%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ + +T KG PNPI + E + P ++L+ +++ G+ PTPIQ Q PI + +++
Sbjct: 360 FREDYSITTKGGKIPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDII 419
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQ---SQLKPGD-GPIVLVLAPTRELAQQIQEVARDFG 210
GVA+TGSGKT A+++P +V I +++ D GP ++LAPTRELAQQI+E FG
Sbjct: 420 GVAETGSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETIKFG 479
Query: 211 SSTYLRSTCVYGGASKGPQ 229
+R+ V GG S+ Q
Sbjct: 480 KPLGIRTVAVIGGISREDQ 498
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 402 (146.6 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 87/202 (43%), Positives = 128/202 (63%)
Query: 228 PQPDR-QVLMWSATWPREVQKLAEDFLDS-YIQINIGSLTLSANHNIQQVVEVCAEHEKE 285
P DR Q LM+SAT+P EVQ+LA +FL + YI + IG+ T A ++QQ + K
Sbjct: 349 PSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGN-TCGACSDVQQNILQVPRLSKR 407
Query: 286 NKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
+KL +L + +T++F +TK+K D + + + IHGD+ Q+ER+ L++
Sbjct: 408 DKLIEILQSTGGE---RTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRD 464
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
FR+G+ ILVAT VA+RGLD+++V+ VINFD PN EDY+HRIGRTGR NTG + +FF
Sbjct: 465 FRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFD 524
Query: 406 QQNSRQ-AKDLIDVLTESNHPV 426
Q+ + L+ VL+E+ V
Sbjct: 525 DQSDGHLVQSLLKVLSEAQQEV 546
Score = 212 (79.7 bits), Expect = 4.8e-58, Sum P(2) = 4.8e-58
Identities = 48/143 (33%), Positives = 76/143 (53%)
Query: 98 DKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGV 156
D+ + + G + P P+ F EANF + K + + G+ + TP+Q P+ +G +++
Sbjct: 151 DECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSC 210
Query: 157 AQTGSGKTLAYMLPAIVHINHQ----SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSS 212
AQTGSGKT A++LP + + S + P +++APTREL QI AR F
Sbjct: 211 AQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYG 270
Query: 213 TYLRSTCVYGGASKGPQPDRQVL 235
T +R +YGG G RQ++
Sbjct: 271 TCIRPVVIYGGTQTG-HSIRQIM 292
Score = 39 (18.8 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 119 NFPDYVLKEVKRQGFDRPTPIQA 141
NF Y V+ G D P P+ A
Sbjct: 146 NFDKYDECAVEMSGLDPPAPLLA 168
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 104/201 (51%), Positives = 152/201 (75%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +M+SATWP+EVQ+LA D+L+ YIQ+ +GSL L+A+HNI+Q+VEV +K +L
Sbjct: 298 RPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARL 357
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
+ ++ +NK +IF TKR D IT+ ++ GW A+ IHGDK+Q ERD+VL EFR
Sbjct: 358 GKDIEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRT 417
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G++ I+VATDVA+RG+DV + V N+D+P N+EDY+HRIGRTGR+ GT+YT+FT N
Sbjct: 418 GKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDN 477
Query: 409 SRQAKDLIDVLTESNHPVDPK 429
++QA++L+ +L+E+ +DPK
Sbjct: 478 AKQARELVSILSEAKQDIDPK 498
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 120/275 (43%), Positives = 169/275 (61%)
Query: 60 GGALRAIDWGN--LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFA 116
G L DW N L PF+K+F+ +V NRS EV +R + ++ + G N P P+T F
Sbjct: 66 GANLVKKDWKNETLIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFE 125
Query: 117 EANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHIN 176
EA FP+YVLKEVK+ GF+ PTPIQ Q WP+AMSG +MVG++ TGSGKTL+Y LPAIVHIN
Sbjct: 126 EAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHIN 185
Query: 177 HQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDRQVLM 236
Q L PGDGPIVLVLAPTRELA QIQ+ FG S+ +R+TCVYGG +GPQ R ++
Sbjct: 186 AQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQI-RDLIR 244
Query: 237 WSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDIS 296
+L D LDS + N+ +T +++++ E + +++ I
Sbjct: 245 GVEICIATPGRLL-DMLDSN-KTNLRRVTYLVLDEADRMLDMGFEPQIRK----IVDQI- 297
Query: 297 SKDENKTIIFAET-KRKVDKITKSIQN-YGWAAVG 329
+ + +T++F+ T ++V ++ + N Y VG
Sbjct: 298 -RPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVG 331
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 395 (144.1 bits), Expect = 5.9e-58, Sum P(2) = 5.9e-58
Identities = 87/199 (43%), Positives = 126/199 (63%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAE-HEKENKLFG 290
RQ + +SATWP V+ LA FL ++I IGS L+A+ NI Q+VE+ + KE L
Sbjct: 346 RQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRSKERMLDN 405
Query: 291 LLND-ISS--KDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
LL +SS KD+ K +IF K++ ++ ++ + VGIHGD SQ R L +F+
Sbjct: 406 LLRKHLSSGGKDD-KILIFVLYKKEAARVEGTLARK-YNVVGIHGDMSQGARLQALNDFK 463
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G+ +LVATDVAARGLD+ V+ VIN +P EDY+HRIGRTGR++ GT+ TFFT Q
Sbjct: 464 SGKCPVLVATDVAARGLDIPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQ 523
Query: 408 NSRQAKDLIDVLTESNHPV 426
+ A +L++VL ++ +
Sbjct: 524 DKSHAGELVNVLRQAKQDI 542
Score = 220 (82.5 bits), Expect = 5.9e-58, Sum P(2) = 5.9e-58
Identities = 50/119 (42%), Positives = 72/119 (60%)
Query: 111 PITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
PI +F E + + + +K + PTPIQA WP ++G ++VG+A+TGSGKT+A+ +P
Sbjct: 165 PILQFDELDVSAKLREGLKN--YKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIP 222
Query: 171 AIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
A+ ++N S K P VLV++PTRELA Q E T L++ VYGGA K Q
Sbjct: 223 ALQYLNGLSDNK--SVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQ 279
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 399 (145.5 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 86/198 (43%), Positives = 127/198 (64%)
Query: 228 PQPDR-QVLMWSATWPREVQKLAEDFLDS-YIQINIGSLTLSANHNIQQVVEVCAEHEKE 285
P DR Q LM+SAT+P EVQ+LA +FL + YI + IG+ T A ++QQ + K
Sbjct: 349 PSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGN-TCGACSDVQQNILQVPRLSKR 407
Query: 286 NKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
+KL +L + +T++F +TK+K D + + + IHGD+ Q+ER+ L++
Sbjct: 408 DKLIEILQSTGGE---RTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRD 464
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
FR+G+ ILVAT VA+RGLD+++V+ VINFD PN EDY+HRIGRTGR NTG + +FF
Sbjct: 465 FRSGKCQILVATSVASRGLDIENVQHVINFDLPNTIEDYVHRIGRTGRCGNTGKAVSFFD 524
Query: 406 QQNSRQ-AKDLIDVLTES 422
Q+ + L+ VL+E+
Sbjct: 525 DQSDGHLVQSLLKVLSEA 542
Score = 212 (79.7 bits), Expect = 9.9e-58, Sum P(2) = 9.9e-58
Identities = 48/143 (33%), Positives = 76/143 (53%)
Query: 98 DKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGV 156
D+ + + G + P P+ F EANF + K + + G+ + TP+Q P+ +G +++
Sbjct: 151 DECAVEMSGLDPPAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSC 210
Query: 157 AQTGSGKTLAYMLPAIVHINHQ----SQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSS 212
AQTGSGKT A++LP + + S + P +++APTREL QI AR F
Sbjct: 211 AQTGSGKTAAFLLPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYG 270
Query: 213 TYLRSTCVYGGASKGPQPDRQVL 235
T +R +YGG G RQ++
Sbjct: 271 TCIRPVVIYGGTQTG-HSIRQIM 292
Score = 39 (18.8 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 119 NFPDYVLKEVKRQGFDRPTPIQA 141
NF Y V+ G D P P+ A
Sbjct: 146 NFDKYDECAVEMSGLDPPAPLLA 168
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 322 (118.4 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 68/200 (34%), Positives = 115/200 (57%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDR V + SATWP V+KL + + + GSL L++ ++ Q E + ++
Sbjct: 265 RPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFVPHDSRFLRV 324
Query: 289 FGLLNDISSKD-EN-KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
++N +++ +N K IIF ++K D ++ G + G+HG +SQ +R+ L
Sbjct: 325 CEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNML 384
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
R+G ILVATD+A+RG+DV D+ V+N+D+P + E+Y+HR+GRTGR+ G + +F
Sbjct: 385 RSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVHRVGRTGRAGRKGEAMSFLWW 444
Query: 407 QNSRQAKDLIDVLTESNHPV 426
+ + LI +L +S V
Sbjct: 445 NDRSNFEGLIQILEKSEQEV 464
Score = 294 (108.6 bits), Expect = 1.2e-57, Sum P(2) = 1.2e-57
Identities = 64/170 (37%), Positives = 105/170 (61%)
Query: 67 DWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPDY-VL 125
D +P +KN L + ++ + + + T+K P P+ F +A + ++
Sbjct: 39 DLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVK--IPPPVNSFEQAFGSNASIM 96
Query: 126 KEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ-SQLKPG 184
E+++ GF++P+PIQ+Q WP+ +SG + +GV+QTGSGKTLA++LPA++HI+ Q +Q +
Sbjct: 97 GEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKN 156
Query: 185 D-----GPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
D P VLVL+PTRELAQQI+ + + + Y +S C+YGG S+ Q
Sbjct: 157 DEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGY-KSVCLYGGGSRPEQ 205
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 349 (127.9 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 75/196 (38%), Positives = 112/196 (57%)
Query: 227 GPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
G RQ +M++AT P V++LA +L + IGS + ++Q V + +E EK
Sbjct: 594 GKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK 652
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
KL +L + IIF K+ D + KS++ G+ A +HG K Q++R++ L
Sbjct: 653 KLLAILEQ---GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNL 709
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
+ G ILVATDVA RG+D+ DV V+N+D N EDYIHRIGRTGR+ +G + TF T+
Sbjct: 710 KAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTK 769
Query: 407 QNSRQAKDLIDVLTES 422
++S +L + ES
Sbjct: 770 EDSAVFYELKQAILES 785
Score = 277 (102.6 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 56/139 (40%), Positives = 87/139 (62%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ + +T KG PNPI + +++ P ++L+ + + G+ PTPIQ Q PI + +++
Sbjct: 372 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 431
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQ---SQLKPGD-GPIVLVLAPTRELAQQIQEVARDFG 210
GVA+TGSGKT A+++P +V I +++ D GP ++LAPTRELAQQI+E FG
Sbjct: 432 GVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFG 491
Query: 211 SSTYLRSTCVYGGASKGPQ 229
+R+ V GG S+ Q
Sbjct: 492 KPLGIRTVAVIGGISREDQ 510
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 349 (127.9 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 75/196 (38%), Positives = 112/196 (57%)
Query: 227 GPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
G RQ +M++AT P V++LA +L + IGS + ++Q V + +E EK
Sbjct: 595 GKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK 653
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
KL +L + IIF K+ D + KS++ G+ A +HG K Q++R++ L
Sbjct: 654 KLLAILEQ---GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNL 710
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
+ G ILVATDVA RG+D+ DV V+N+D N EDYIHRIGRTGR+ +G + TF T+
Sbjct: 711 KAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTK 770
Query: 407 QNSRQAKDLIDVLTES 422
++S +L + ES
Sbjct: 771 EDSAVFYELKQAILES 786
Score = 277 (102.6 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 56/139 (40%), Positives = 87/139 (62%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ + +T KG PNPI + +++ P ++L+ + + G+ PTPIQ Q PI + +++
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 432
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQ---SQLKPGD-GPIVLVLAPTRELAQQIQEVARDFG 210
GVA+TGSGKT A+++P +V I +++ D GP ++LAPTRELAQQI+E FG
Sbjct: 433 GVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFG 492
Query: 211 SSTYLRSTCVYGGASKGPQ 229
+R+ V GG S+ Q
Sbjct: 493 KPLGIRTVAVIGGISREDQ 511
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 349 (127.9 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 75/196 (38%), Positives = 112/196 (57%)
Query: 227 GPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
G RQ +M++AT P V++LA +L + IGS + ++Q V + +E EK
Sbjct: 595 GKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK 653
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
KL +L + IIF K+ D + KS++ G+ A +HG K Q++R++ L
Sbjct: 654 KLLAILEQ---GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNL 710
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
+ G ILVATDVA RG+D+ DV V+N+D N EDYIHRIGRTGR+ +G + TF T+
Sbjct: 711 KAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTK 770
Query: 407 QNSRQAKDLIDVLTES 422
++S +L + ES
Sbjct: 771 EDSAVFYELKQAILES 786
Score = 277 (102.6 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 56/139 (40%), Positives = 87/139 (62%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ + +T KG PNPI + +++ P ++L+ + + G+ PTPIQ Q PI + +++
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 432
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQ---SQLKPGD-GPIVLVLAPTRELAQQIQEVARDFG 210
GVA+TGSGKT A+++P +V I +++ D GP ++LAPTRELAQQI+E FG
Sbjct: 433 GVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFG 492
Query: 211 SSTYLRSTCVYGGASKGPQ 229
+R+ V GG S+ Q
Sbjct: 493 KPLGIRTVAVIGGISREDQ 511
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 349 (127.9 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 75/196 (38%), Positives = 112/196 (57%)
Query: 227 GPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
G RQ +M++AT P V++LA +L + IGS + ++Q V + +E EK
Sbjct: 595 GKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAG-KPHERVEQKVFLMSESEKRK 653
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
KL +L + IIF K+ D + KS++ G+ A +HG K Q++R++ L
Sbjct: 654 KLLAILEQ---GFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNL 710
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
+ G ILVATDVA RG+D+ DV V+N+D N EDYIHRIGRTGR+ +G + TF T+
Sbjct: 711 KAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTK 770
Query: 407 QNSRQAKDLIDVLTES 422
++S +L + ES
Sbjct: 771 EDSAVFYELKQAILES 786
Score = 277 (102.6 bits), Expect = 2.7e-57, Sum P(2) = 2.7e-57
Identities = 56/139 (40%), Positives = 87/139 (62%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ + +T KG PNPI + +++ P ++L+ + + G+ PTPIQ Q PI + +++
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 432
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQ---SQLKPGD-GPIVLVLAPTRELAQQIQEVARDFG 210
GVA+TGSGKT A+++P +V I +++ D GP ++LAPTRELAQQI+E FG
Sbjct: 433 GVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFG 492
Query: 211 SSTYLRSTCVYGGASKGPQ 229
+R+ V GG S+ Q
Sbjct: 493 KPLGIRTVAVIGGISREDQ 511
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 311 (114.5 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 77/202 (38%), Positives = 120/202 (59%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ LM+SAT+ ++V++LA D L ++I G + AN +I+Q V V ++ KL
Sbjct: 442 RPDRQCLMFSATFKQKVERLARDALVDPVRIVQGEVG-EANADIEQKVFVM--QNQDVKL 498
Query: 289 FGLL-NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L+ N + K +IF K + + K ++ + V +HGD Q ER+ L +FR
Sbjct: 499 HWLIRNLVEFASLGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFR 558
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
++ ILVATDVAARGLD+ +++ VINFD + + ++HRIGRTGR+ + GT+YT T++
Sbjct: 559 K-KSQILVATDVAARGLDISEIRTVINFDMARDIDTHVHRIGRTGRAGHKGTAYTLVTEK 617
Query: 408 NSRQAKDLIDVLTESNHPVDPK 429
+ L+ L + V PK
Sbjct: 618 DIEMVGHLVKNLESVSQEV-PK 638
Score = 309 (113.8 bits), Expect = 1.5e-56, Sum P(2) = 1.5e-56
Identities = 62/159 (38%), Positives = 96/159 (60%)
Query: 74 FEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLK-GNA--PNPITEFAEANFPDYVLKEVKR 130
F KNF+ + + H + R ++ M L+ G P P+ FA +F +++ +++
Sbjct: 225 FNKNFYEEHEDI--KRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
+++PTPIQA P A+SG +++G+A+TGSGKT AY+ PAIVHI Q LK G+GP+ +
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAV 342
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
++ PTRELA Q+ + A+ F + C YGG SK Q
Sbjct: 343 IVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQ 381
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 340 (124.7 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
Identities = 73/191 (38%), Positives = 110/191 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ +M++AT P V++LA +L + IGS+ +Q+V + E++K KL +
Sbjct: 602 RQTVMFTATMPPAVERLARTYLRRPATVYIGSVG-KPTERTEQIVYMMGENDKRKKLMEI 660
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L S K + IIF K+ D + K ++ G+ + +HG K Q++R+Y L ++G
Sbjct: 661 L---SRKIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAK 717
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
ILVATDVA RG+D+ DV VIN+D EDY HRIGRTGR+ TG + +F T+ +S
Sbjct: 718 DILVATDVAGRGIDIKDVSLVINYDMAKTIEDYTHRIGRTGRAGKTGCAISFVTKDDSAL 777
Query: 412 AKDLIDVLTES 422
DL ++ S
Sbjct: 778 FYDLKQCVSAS 788
Score = 277 (102.6 bits), Expect = 2.6e-56, Sum P(2) = 2.6e-56
Identities = 57/139 (41%), Positives = 86/139 (61%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ + +T+KG PNPI + E+ FP ++ + + G+ PTPIQ Q PI + +++
Sbjct: 376 FREDYNVTIKGGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDII 435
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQ---SQLKPGD-GPIVLVLAPTRELAQQIQEVARDFG 210
GVA+TGSGKTLA+++P + I +L+ D GP +++APTRELAQQI+E FG
Sbjct: 436 GVAETGSGKTLAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFG 495
Query: 211 SSTYLRSTCVYGGASKGPQ 229
+R+ V GG S+ Q
Sbjct: 496 QPLGIRTVVVVGGLSREEQ 514
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 330 (121.2 bits), Expect = 3.3e-56, Sum P(2) = 3.3e-56
Identities = 73/191 (38%), Positives = 107/191 (56%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ +M++AT +++LA +L ++IGS ++QVV + E K KL +
Sbjct: 509 RQTVMFTATMSSAIERLARQYLRRPAVVHIGSAG-KPTERVEQVVYMVPEDRKRKKLVEV 567
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L S+ + IIF K+ D ++K + G+ +HG K Q +R+Y L+ + G +
Sbjct: 568 LE---SQFQPPIIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTS 624
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
ILVATDVA RG+DV DV V+N+D + EDY HRIGRTGR+ G + TF T ++
Sbjct: 625 DILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTHRIGRTGRAGKHGKAITFLTPDDTAV 684
Query: 412 AKDLIDVLTES 422
DL VL ES
Sbjct: 685 YFDLKQVLVES 695
Score = 284 (105.0 bits), Expect = 3.3e-56, Sum P(2) = 3.3e-56
Identities = 59/146 (40%), Positives = 89/146 (60%)
Query: 89 SPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIA 147
S + + FR+ +++KG P P+ + EA FPD V + VK G+ PTPIQ Q PI
Sbjct: 276 SDRDWRIFREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIG 335
Query: 148 MSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGD----GPIVLVLAPTRELAQQIQ 203
+ +++GVA+TGSGKT A++LP +V I +++ + GP +++APTRELAQQI+
Sbjct: 336 LQNRDVIGVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIE 395
Query: 204 EVARDFGSSTYLRSTCVYGGASKGPQ 229
E FG +++ V GGAS+ Q
Sbjct: 396 EETNKFGKLLGIKTVSVIGGASREDQ 421
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 452 (164.2 bits), Expect = 3.9e-55, Sum P(2) = 3.9e-55
Identities = 93/199 (46%), Positives = 133/199 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ RQ +M+SAT+P+E+Q LA DFL+ YI + +G + S + NI Q V E++K +
Sbjct: 404 PKGLRQTMMFSATFPKEIQILARDFLEDYIFLAVGRVG-STSENITQKVVWVEENDKRSF 462
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + G+A IHGD+SQ++R+ L +FR
Sbjct: 463 LLDLLN-ATGKD-SLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFR 520
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+GR ILVAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +FF +
Sbjct: 521 SGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNDK 580
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 581 NGNITKDLLDILVEAKQEV 599
Score = 141 (54.7 bits), Expect = 3.9e-55, Sum P(2) = 3.9e-55
Identities = 38/121 (31%), Positives = 55/121 (45%)
Query: 56 NSTMGGALRAIDWGN-LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITE 114
NS R DW LPP E+ H S N + + + D N P PI
Sbjct: 152 NSRWVEECRDEDWSKPLPPNER-LEHELFSGSNTGIN-FEKYDDIPVEATGHNGPQPIDR 209
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F + + ++ + + RPTP+Q PI S +++ AQTGSGKT A++LP +
Sbjct: 210 FHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQ 269
Query: 175 I 175
I
Sbjct: 270 I 270
Score = 118 (46.6 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 61/215 (28%), Positives = 100/215 (46%)
Query: 187 PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQP---DRQVLMWSATWPR 243
PI LVLAPTRELA QI + AR F +++R VYGGA G Q +R + AT R
Sbjct: 299 PISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 358
Query: 244 -----EVQKLAEDFLDSYIQINIGS--LTLSANHNIQQVVEVCAEHEKENKLFGLLNDIS 296
E K+ D+ + Y+ ++ L + I+++VE K GL
Sbjct: 359 LLDMMERGKIGLDYCN-YLVLDEADRMLDMGFEPQIRRIVEQDTMPPK-----GL----- 407
Query: 297 SKDENKTIIFAET-KRKVDKITKS-IQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGIL 354
+T++F+ T +++ + + +++Y + AVG G S+ V+ N + L
Sbjct: 408 ----RQTMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEENDKRSFL 463
Query: 355 VATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIG 389
+ + A G D + FV + ED+++R G
Sbjct: 464 LDL-LNATGKDSLTLVFVETKKGADALEDFLYREG 497
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 340 (124.7 bits), Expect = 9.6e-55, Sum P(3) = 9.6e-55
Identities = 75/198 (37%), Positives = 115/198 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
R M+SAT P V++LA +L + + + IG+ + + Q V+ + E EK +L L
Sbjct: 512 RTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLISQHVI-MMKESEKFFRLQKL 570
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L+++ K I+F TK+ D I K++ G+ +HG KSQ++R+ L+ FR R
Sbjct: 571 LDELGEKT---AIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRY 627
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDV RG+D+ DV VIN+D P + E Y HRIGRTGR+ +G + +F T ++
Sbjct: 628 NVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEV 687
Query: 412 AKDLIDVLTESNHPVDPK 429
DL +L +SN V P+
Sbjct: 688 FYDLKQMLVQSNSAVPPE 705
Score = 243 (90.6 bits), Expect = 9.6e-55, Sum P(3) = 9.6e-55
Identities = 50/134 (37%), Positives = 80/134 (59%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ ++ KG+ P P+ + E+ +LK V+R G+ +P+PIQ P+ + +++
Sbjct: 295 FREDFNISYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVI 354
Query: 155 GVAQTGSGKTLAYMLPAIVHINH---QSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGS 211
G+A+TGSGKT A++LP + +I+ S+ +GP +V+APTRELAQQI+E F
Sbjct: 355 GIAETGSGKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAH 414
Query: 212 STYLRSTCVYGGAS 225
R T + GG S
Sbjct: 415 YLGFRVTSIVGGQS 428
Score = 37 (18.1 bits), Expect = 9.6e-55, Sum P(3) = 9.6e-55
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 65 AIDWGNLPPFEKNFFHPSPSVLNRSPHEVQ 94
+ DW N ++ +VL ++PHE Q
Sbjct: 187 SFDWENTEDTSRDM-----NVLYQNPHEAQ 211
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 423 (154.0 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 94/196 (47%), Positives = 127/196 (64%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQ-VVEVCAEHEKENKLFG 290
RQ +M+SAT+ +E+Q LA+++L Y + +G + S N I+Q +V V E+ENK
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFV----EEENKCNY 635
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LLN ++ + TI+F ETKRK D I + + N AV IHGDKSQ ER+ LK F+ G
Sbjct: 636 LLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGI 695
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
ILVATDVAARGLD+ ++K VINFD P+N +DYIHRIGRTGR+ N G + +F + N
Sbjct: 696 KNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKN 755
Query: 411 QAKDLIDVLTESNHPV 426
KDL+ L E N +
Sbjct: 756 IFKDLLATLEECNQQI 771
Score = 179 (68.1 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 52/153 (33%), Positives = 78/153 (50%)
Query: 87 NRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPI 146
N P E+ F ++ ++ +P N + +L +K+ +D+ TPIQ I
Sbjct: 342 NSIPVEISGFNSENVAAIE-TFDDP-----SLNLNELLLSNIKKVNYDKTTPIQKYSLNI 395
Query: 147 AMSGSNMVGVAQTGSGKTLAYMLPAIVH--IN-------HQSQLKPGDG-------PIVL 190
M+ ++++GVAQTGSGKT Y+LP I H IN ++ K + PI L
Sbjct: 396 IMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICL 455
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+LAPTRELA QI A+ F T ++ +YGG
Sbjct: 456 ILAPTRELAVQIFYDAKKFCFETGIKPVVLYGG 488
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 423 (154.0 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 94/196 (47%), Positives = 127/196 (64%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQ-VVEVCAEHEKENKLFG 290
RQ +M+SAT+ +E+Q LA+++L Y + +G + S N I+Q +V V E+ENK
Sbjct: 581 RQTIMFSATFRKEIQVLAKEYLCKYTFLLVGKVG-STNEYIKQNLVFV----EEENKCNY 635
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LLN ++ + TI+F ETKRK D I + + N AV IHGDKSQ ER+ LK F+ G
Sbjct: 636 LLNLLAENNNGLTILFVETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGI 695
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
ILVATDVAARGLD+ ++K VINFD P+N +DYIHRIGRTGR+ N G + +F + N
Sbjct: 696 KNILVATDVAARGLDISNIKHVINFDLPSNIDDYIHRIGRTGRAGNIGIATSFVNEDNKN 755
Query: 411 QAKDLIDVLTESNHPV 426
KDL+ L E N +
Sbjct: 756 IFKDLLATLEECNQQI 771
Score = 179 (68.1 bits), Expect = 1.0e-54, Sum P(2) = 1.0e-54
Identities = 52/153 (33%), Positives = 78/153 (50%)
Query: 87 NRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPI 146
N P E+ F ++ ++ +P N + +L +K+ +D+ TPIQ I
Sbjct: 342 NSIPVEISGFNSENVAAIE-TFDDP-----SLNLNELLLSNIKKVNYDKTTPIQKYSLNI 395
Query: 147 AMSGSNMVGVAQTGSGKTLAYMLPAIVH--IN-------HQSQLKPGDG-------PIVL 190
M+ ++++GVAQTGSGKT Y+LP I H IN ++ K + PI L
Sbjct: 396 IMNRNDLIGVAQTGSGKTAGYLLPIINHMLINDPPKHTYYEQNNKTSNYYFNRVCLPICL 455
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+LAPTRELA QI A+ F T ++ +YGG
Sbjct: 456 ILAPTRELAVQIFYDAKKFCFETGIKPVVLYGG 488
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 359 (131.4 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 83/198 (41%), Positives = 117/198 (59%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q+ A L +++N+G +AN N+ Q VE + E K+ L
Sbjct: 411 RQTLLFSATMPKKIQEFARSALVLPVEVNVGRAG-AANLNVTQEVEFV---KPEAKIVYL 466
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IF E K+ VD I + + AV IHGDKSQ ER+ +K FR G+
Sbjct: 467 LECLQ-KTPPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGDKSQDERESAIKAFREGKK 525
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD +++ VINFD P E+YIHRIGRTGR N G + TF + N+
Sbjct: 526 DVLVATDVASKGLDFPEIQHVINFDMPREIENYIHRIGRTGRRGNKGVATTFINKNNTES 585
Query: 412 AK-DLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 586 LLLDLKYLLIEAKQKVPP 603
Score = 237 (88.5 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 49/134 (36%), Positives = 79/134 (58%)
Query: 85 VLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQG 143
+L R + Q RD+ + G + P PIT F E P V+ + +G +P+PIQ QG
Sbjct: 193 ILERDEKDHQKVRDQLNIITDGEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQG 252
Query: 144 WPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH-INHQSQLK--PGDGPIVLVLAPTRELAQ 200
P+ +SG +M+G+A TGSGKTL + LP ++ + + +L G+GP L+L P+RELA+
Sbjct: 253 LPVILSGRDMIGIAYTGSGKTLVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELAR 312
Query: 201 QIQEVARDFGSSTY 214
Q ++ F ++ +
Sbjct: 313 QTYDLVNSFTNALH 326
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 392 (143.0 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 83/194 (42%), Positives = 125/194 (64%)
Query: 231 DRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
+R M+SAT+P+E+Q LA+DFL ++Y+ + +G + S + NI Q + E EK + L
Sbjct: 425 ERITAMFSATFPKEIQLLAQDFLKENYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLM 483
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
LL+ ++ D + T++F ETKR + + + V IHGD Q ER+ L FR G
Sbjct: 484 DLLD--ATGDSSLTLVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTG 541
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
A ILVAT VAARGLD+ +VK VIN+D P++ ++Y+HRIGRTGR N G + +FF +N
Sbjct: 542 TAPILVATAVAARGLDIPNVKHVINYDLPSDVDEYVHRIGRTGRVGNVGLATSFFNDKNR 601
Query: 410 RQAKDLIDVLTESN 423
A++L+D++ E+N
Sbjct: 602 NIARELMDLIVEAN 615
Score = 202 (76.2 bits), Expect = 1.7e-54, Sum P(2) = 1.7e-54
Identities = 47/128 (36%), Positives = 72/128 (56%)
Query: 107 NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLA 166
+ P PI+ F++ + +++ + +K G+DRPTP+Q P G +++ AQTGSGKT A
Sbjct: 225 DVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAA 284
Query: 167 YMLP---AIVHIN----HQSQLKPGDG----PIVLVLAPTRELAQQIQEVARDFGSSTYL 215
+++P AI+ H+S G P LVL+PTREL+ QI +R F T +
Sbjct: 285 FLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPI 344
Query: 216 RSTCVYGG 223
S +YGG
Sbjct: 345 TSALLYGG 352
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 455 (165.2 bits), Expect = 3.2e-54, Sum P(2) = 3.2e-54
Identities = 92/199 (46%), Positives = 134/199 (67%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ RQ +M+SAT+P+E+Q LA DFL+ YI + +G + S + NI Q V E++K +
Sbjct: 420 PKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVG-STSENITQKVVWVEENDKRSF 478
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LLN + KD + T++F ETK+ D + + G+A IHGD+SQ++R+ L +FR
Sbjct: 479 LLDLLN-ATGKD-SLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFR 536
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+GR I+VAT VAARGLD+ +VK VINFD P++ E+Y+HRIGRTGR N G + +F+ +
Sbjct: 537 SGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDK 596
Query: 408 NSRQAKDLIDVLTESNHPV 426
NS KDL+D+L E+ V
Sbjct: 597 NSNITKDLLDILVEAKQEV 615
Score = 131 (51.2 bits), Expect = 3.2e-54, Sum P(2) = 3.2e-54
Identities = 34/120 (28%), Positives = 57/120 (47%)
Query: 67 DWGN-LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPDYVL 125
DW +PP E+ H S N + + + D N+P I F + + + ++
Sbjct: 178 DWSKPMPPNER-LEHELFSASNTGIN-FEKYDDIPVEATGTNSPGHIESFHDVDMGEIIM 235
Query: 126 KEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGD 185
+ + RPTP+Q PI + +++ AQTGSGKT A++LP + I + PG+
Sbjct: 236 GNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEG---PGE 292
Score = 116 (45.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 59/215 (27%), Positives = 97/215 (45%)
Query: 187 PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQP---DRQVLMWSATWPR 243
PI LVLAPTRELA QI + AR F + +R VYGGA G Q +R + AT R
Sbjct: 315 PISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGR 374
Query: 244 EVQ-----KLAEDFLDSYIQINIGS--LTLSANHNIQQVVEVCAEHEKENKLFGLLNDIS 296
V K+ D+ Y+ ++ L + I+++VE + +
Sbjct: 375 LVDMMERGKIGLDYC-KYLVLDEADRMLDMGFEPQIRRIVEQ--------------DTMP 419
Query: 297 SKDENKTIIFAET-KRKVDKITKS-IQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGIL 354
K +T++F+ T +++ + + ++ Y + AVG G S+ V+ N + L
Sbjct: 420 PKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFL 479
Query: 355 VATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIG 389
+ + A G D + FV + ED+++R G
Sbjct: 480 LDL-LNATGKDSLTLVFVETKKGADALEDFLYREG 513
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 337 (123.7 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 71/192 (36%), Positives = 118/192 (61%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKE-NKLFG 290
RQ +M+SAT P V LA+ +L + + IG++ + + ++Q VE+ ++ K+ ++
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDR-VEQRVEMISDDSKKWRRVEE 508
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+L S++ IIF KR ++ I K + GW AV +HG KSQ++R+ +++ RN
Sbjct: 509 ILE--SNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKT 566
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
A ILVATD+A RG+D+ +V V+N++ + EDY HRIGRTGR+ +GT+ TF +++
Sbjct: 567 ADILVATDIAGRGIDIPNVSLVLNYNMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTD 626
Query: 411 QAKDLIDVLTES 422
DL +L+ S
Sbjct: 627 VYYDLRVLLSRS 638
Score = 249 (92.7 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
Identities = 56/164 (34%), Positives = 91/164 (55%)
Query: 64 RAIDWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPD 122
+ IDW ++P EK P ++ P + + ++ + +++KG+ PNP+ + EA P
Sbjct: 206 KKIDWDDVPWREK----PLEAM---KPRDWRILKEDYNISIKGDDLPNPLRNWEEAGLPS 258
Query: 123 YVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLK 182
+LK +K+ + P+ IQ P+ + +++G+A+TGSGKT A+++P I+ I+ L
Sbjct: 259 EMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLT 318
Query: 183 PGD---GPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ GP +VLAPTRELAQQIQ F R V GG
Sbjct: 319 ESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGG 362
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 337 (123.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 80/198 (40%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 369 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 424
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 425 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 483
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 484 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 543
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 544 VLMDLKALLLEAKQKVPP 561
Score = 246 (91.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 59/160 (36%), Positives = 86/160 (53%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E FP +L+ +K++G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 202
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 203 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 262
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS LR GG S
Sbjct: 263 ICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMS 302
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 337 (123.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 80/198 (40%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 369 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 424
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 425 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 483
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 484 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 543
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 544 VLMDLKALLLEAKQKVPP 561
Score = 246 (91.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 59/160 (36%), Positives = 86/160 (53%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E FP +L+ +K++G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 202
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 203 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 262
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS LR GG S
Sbjct: 263 ICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMS 302
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 337 (123.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 80/198 (40%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 369 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 424
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 425 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 483
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 484 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 543
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 544 VLMDLKALLLEAKQKVPP 561
Score = 246 (91.7 bits), Expect = 2.1e-53, Sum P(2) = 2.1e-53
Identities = 59/160 (36%), Positives = 86/160 (53%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E FP +L+ +K++G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 202
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 203 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 262
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS LR GG S
Sbjct: 263 ICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMS 302
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 337 (123.7 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 80/198 (40%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 387 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 442
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 443 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 501
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 502 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 561
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 562 VLMDLKALLLEAKQKVPP 579
Score = 246 (91.7 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 59/160 (36%), Positives = 86/160 (53%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E FP +L+ +K++G
Sbjct: 161 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 220
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 221 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 280
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS LR GG S
Sbjct: 281 ICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMS 320
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 337 (123.7 bits), Expect = 2.8e-53, Sum P(2) = 2.8e-53
Identities = 80/198 (40%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 396 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 451
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 452 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 510
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 511 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 570
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 571 VLMDLKALLLEAKQKVPP 588
Score = 246 (91.7 bits), Expect = 2.8e-53, Sum P(2) = 2.8e-53
Identities = 59/160 (36%), Positives = 86/160 (53%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E FP +L+ +K++G
Sbjct: 170 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIH 229
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 230 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 289
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS LR GG S
Sbjct: 290 ICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMS 329
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 337 (123.7 bits), Expect = 4.3e-53, Sum P(2) = 4.3e-53
Identities = 80/198 (40%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 369 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 424
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 425 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 483
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 484 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 543
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 544 VLMDLKALLLEAKQKVPP 561
Score = 243 (90.6 bits), Expect = 4.3e-53, Sum P(2) = 4.3e-53
Identities = 59/160 (36%), Positives = 86/160 (53%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E FP +L+ +K++G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIL 202
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 203 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 262
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS LR GG S
Sbjct: 263 ICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMS 302
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 339 (124.4 bits), Expect = 6.2e-53, Sum P(2) = 6.2e-53
Identities = 75/192 (39%), Positives = 113/192 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ +M++AT P V+++A +L + IGS A ++Q VE+ A +K K G
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAG-EAVDTVEQRVEMIAGEDKRKKRLGE 613
Query: 292 LNDISSKDENKTII-FAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+ +SS D II F KR D I + I+ +G+++V +HG K+Q++R+ L RNG
Sbjct: 614 I--LSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGS 671
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATD+A RG+DV DV VINF+ + E Y HRIGRTGR+ +G + TF +++
Sbjct: 672 TDVLVATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDAD 731
Query: 411 QAKDLIDVLTES 422
DL +L +S
Sbjct: 732 VMYDLKQMLIKS 743
Score = 245 (91.3 bits), Expect = 6.2e-53, Sum P(2) = 6.2e-53
Identities = 54/136 (39%), Positives = 78/136 (57%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
F++ + KG + PNP+ + E+ P +L+ V R G+ PTPIQ PIAM +++
Sbjct: 328 FKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLI 387
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQSQL-----KPGDGPIVLVLAPTRELAQQIQEVARDF 209
GVA TGSGKT A++LP + +I ++ + DGP +VLAPTRELAQQI+ A+ F
Sbjct: 388 GVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKF 447
Query: 210 GSSTYLRSTCVYGGAS 225
+ GG S
Sbjct: 448 TEPLGFNVVSIVGGHS 463
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 333 (122.3 bits), Expect = 8.0e-53, Sum P(2) = 8.0e-53
Identities = 79/195 (40%), Positives = 110/195 (56%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
R M+SAT P V++L+ +L + I+IG + +I+Q +E E +K+ KL
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPG-AGKRSIEQKLEFLTEGKKKQKL--- 959
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+I E I+F K+ D I+KSI + AV +HG K+Q+ R+ L F+N
Sbjct: 960 -QEILEMYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEF 1018
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
ILVATDVA RG+DV VK VINFD P + E Y HRIGRTGR+ G + +F T+ +S
Sbjct: 1019 DILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHL 1078
Query: 412 AKDLIDVLTESNHPV 426
DL L SN+ V
Sbjct: 1079 FYDLKQFLISSNNIV 1093
Score = 256 (95.2 bits), Expect = 8.0e-53, Sum P(2) = 8.0e-53
Identities = 54/138 (39%), Positives = 84/138 (60%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ +++ +KG P PI ++ E+N + +LK +K+ +++PTPIQ Q PIA+ +++
Sbjct: 680 FREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 739
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQSQLK---PGDGPIVLVLAPTRELAQQIQEVARDFGS 211
G+A+TGSGKT A++LP + ++ L DGP LV+AP+RELA QI E F S
Sbjct: 740 GIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFAS 799
Query: 212 STYLRSTCVYGGASKGPQ 229
R+ V GG + Q
Sbjct: 800 YCSCRTVAVVGGRNAEAQ 817
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 333 (122.3 bits), Expect = 8.0e-53, Sum P(2) = 8.0e-53
Identities = 79/195 (40%), Positives = 110/195 (56%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
R M+SAT P V++L+ +L + I+IG + +I+Q +E E +K+ KL
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIGDPG-AGKRSIEQKLEFLTEGKKKQKL--- 959
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+I E I+F K+ D I+KSI + AV +HG K+Q+ R+ L F+N
Sbjct: 960 -QEILEMYEPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEF 1018
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
ILVATDVA RG+DV VK VINFD P + E Y HRIGRTGR+ G + +F T+ +S
Sbjct: 1019 DILVATDVAGRGIDVHGVKLVINFDMPKDIESYTHRIGRTGRAGMKGLAISFITEHDSHL 1078
Query: 412 AKDLIDVLTESNHPV 426
DL L SN+ V
Sbjct: 1079 FYDLKQFLISSNNIV 1093
Score = 256 (95.2 bits), Expect = 8.0e-53, Sum P(2) = 8.0e-53
Identities = 54/138 (39%), Positives = 84/138 (60%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ +++ +KG P PI ++ E+N + +LK +K+ +++PTPIQ Q PIA+ +++
Sbjct: 680 FREDNEIYIKGGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLI 739
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQSQLK---PGDGPIVLVLAPTRELAQQIQEVARDFGS 211
G+A+TGSGKT A++LP + ++ L DGP LV+AP+RELA QI E F S
Sbjct: 740 GIAETGSGKTAAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFAS 799
Query: 212 STYLRSTCVYGGASKGPQ 229
R+ V GG + Q
Sbjct: 800 YCSCRTVAVVGGRNAEAQ 817
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 365 (133.5 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 77/197 (39%), Positives = 125/197 (63%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDS-YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
RQ LM+SAT+P E+++LA ++L S ++ + +G L A ++ Q V E+ K KL
Sbjct: 461 RQTLMFSATYPEEIRRLASNYLKSEHLFVVVG-LVGGACSDVAQTVLEMRENGKMEKLLE 519
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+L S ++ +T+IF TK+K D I + +++ IHGD+ Q +R+ L +FR G+
Sbjct: 520 ILK---SSEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGK 576
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
++V T VAARGLD+++V+ VIN+D P ++Y+HRIGRTGR NTG + +FF Q+
Sbjct: 577 CTVIVCTAVAARGLDIENVQHVINYDVPKEVDEYVHRIGRTGRCGNTGKATSFFNVQDDH 636
Query: 411 Q-AKDLIDVLTESNHPV 426
A+ L+ +LT+++ V
Sbjct: 637 VIARPLVKILTDAHQEV 653
Score = 211 (79.3 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 56/156 (35%), Positives = 83/156 (53%)
Query: 72 PPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQ 131
P E N F S +N ++ + D +T K + P I F EAN + + + V R
Sbjct: 238 PDGEDNIFRQYQSGINFDKYD-EILVD---VTGK-DVPPAILTFEEANLCETLRRNVARA 292
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQ----SQLKPGDGP 187
G+ + TP+Q PI M+G +++ AQTGSGKT A++LP + ++ ++ SQ P
Sbjct: 293 GYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPILSYMMNEGITASQYLQLQEP 352
Query: 188 IVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+++APTREL QI AR F T +R VYGG
Sbjct: 353 EAIIIAPTRELINQIYLDARKFSYGTCVRPVVVYGG 388
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 337 (123.7 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 80/198 (40%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 369 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 424
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 425 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 483
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 484 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 543
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 544 VLMDLKALLLEAKQKVPP 561
Score = 237 (88.5 bits), Expect = 1.9e-52, Sum P(2) = 1.9e-52
Identities = 58/160 (36%), Positives = 85/160 (53%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E P +L+ +K++G
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGIL 202
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 203 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 262
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS LR GG S
Sbjct: 263 ICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMS 302
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 340 (124.7 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 82/198 (41%), Positives = 115/198 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L I IN+G +A+ ++ Q VE E E K+ L
Sbjct: 365 RQTLLFSATMPKKIQNFAKSALVKPITINVGRAG-AASLDVVQEVEYVKE---EAKMVYL 420
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ FR+G+
Sbjct: 421 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKK 479
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 480 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 539
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 540 VLMDLKALLLEAKQKVPP 557
Score = 230 (86.0 bits), Expect = 3.8e-52, Sum P(2) = 3.8e-52
Identities = 47/109 (43%), Positives = 69/109 (63%)
Query: 97 RDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVG 155
R K+ + ++G P PI F E FP +L+ +K++G +PTPIQ QG P +SG +M+G
Sbjct: 160 RKKYHILVEGEGIPPPIKSFKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIG 219
Query: 156 VAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLVLAPTRELAQQ 201
+A TGSGKTL + LP I+ Q + P +GP L++ P+RELA+Q
Sbjct: 220 IAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQ 268
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 290 (107.1 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 69/195 (35%), Positives = 108/195 (55%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
R +++SAT P V+KL++ +L I IG + Q V+ V +E++K+ L L
Sbjct: 616 RTTILFSATMPPLVEKLSKKYLRRPCTITIGEAGKVVDRIRQTVIFVKSENDKKEHLTQL 675
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+ D IIF K+ D I ++ + +H +SQ++R+ L+ F+ +
Sbjct: 676 IKD---GPPPPIIIFVNKKKHCDIIAPVLEECRVSYTILHSGRSQEQREAALEGFKKRKY 732
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+L+AT VA+RG+ VD V VINFD P N EDY HRIGRTGR+ + G + +F T ++
Sbjct: 733 EVLIATGVASRGIHVDGVTHVINFDIPKNIEDYTHRIGRTGRAGSAGLASSFITDKDVEI 792
Query: 412 AKDLIDVLTESNHPV 426
DL +LT +N+ V
Sbjct: 793 MYDLKQILTSTNNIV 807
Score = 289 (106.8 bits), Expect = 3.9e-52, Sum P(2) = 3.9e-52
Identities = 58/149 (38%), Positives = 95/149 (63%)
Query: 81 PSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKRQGFDRPTPI 139
P S+ R H F++ ++ KG APNPI + E+N P +L+ +++ G+++P+PI
Sbjct: 383 PLKSMTKRDWH---IFKEDFNISTKGGIAPNPIRTWQESNLPREILEAIRQLGYEKPSPI 439
Query: 140 QAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLVLAPTR 196
Q Q PI+++G +++G+A+TGSGKT A+++P +++I+ Q +L DGP LV+APTR
Sbjct: 440 QMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYISKQPRLTKDTEADGPYALVMAPTR 499
Query: 197 ELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
EL QQI++ R+F R + GG S
Sbjct: 500 ELVQQIEKETRNFAQHFGFRVVSLVGGQS 528
Score = 46 (21.3 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 19/61 (31%), Positives = 31/61 (50%)
Query: 248 LAEDFL-DSYIQINIG-SLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTII 305
LA F+ D ++I L++ +NI + E+ +H + G SSKD NK++I
Sbjct: 780 LASSFITDKDVEIMYDLKQILTSTNNIVPI-ELL-KHPSSQQKHG-----SSKDHNKSVI 832
Query: 306 F 306
F
Sbjct: 833 F 833
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 333 (122.3 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 79/198 (39%), Positives = 114/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L + IN+G ++ IQ+V V ++E K+ L
Sbjct: 368 RQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYV----KEEAKMVYL 423
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFA+ K VD I + + G AV IHG K Q+ER ++ FR G+
Sbjct: 424 LECLQ-KTPPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKK 482
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VIN+D P E+Y+HRIGRTGRS NTG + TF +
Sbjct: 483 DVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDES 542
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 543 VLMDLKALLLEAKQKVPP 560
Score = 233 (87.1 bits), Expect = 1.4e-51, Sum P(2) = 1.4e-51
Identities = 57/160 (35%), Positives = 84/160 (52%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFD 134
K + P VL+ S + R K+ + ++G+ P PI F E P +L+ +K++G
Sbjct: 142 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMKLPAAILRGLKKKGIL 201
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P +SG +M+G+A TGSGKTL + LP I+ Q + P +GP L+
Sbjct: 202 HPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLI 261
Query: 192 LAPTRELAQQIQEVARDF------GSSTYLRSTCVYGGAS 225
+ P+RELA+Q + + SS L GG S
Sbjct: 262 ICPSRELARQTHGILEYYCRLLQEDSSPLLHCALCIGGVS 301
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 311 (114.5 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 67/189 (35%), Positives = 108/189 (57%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D+Q M SAT+P +Q +A+ L I+I +G N+NI Q VE+ E +K +L
Sbjct: 904 DKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKG-KTNNNIYQFVEIIEESKKVFRLLK 962
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL + +IF + + D + + Y + + +HG + Q +R + L++F+
Sbjct: 963 LLGEWIKY--GLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEE 1020
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+L+AT V ARG+D+ ++ VIN+ P++ EDYIHRIGRTGRS+N G +YTF
Sbjct: 1021 NKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIGRTGRSNNIGYAYTFILPNEYT 1080
Query: 411 QAKDLIDVL 419
+A D+ ++L
Sbjct: 1081 KAYDIYNLL 1089
Score = 269 (99.8 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 52/155 (33%), Positives = 89/155 (57%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFRDKH-QMTLKG-NAPNPITEFAEANFPDYVLKEVKR 130
P +KN + + N +V FR + + ++G N P P+ F + P +L+ +++
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
+ F + IQ Q P M G +++ +A+TGSGKTL+Y+ P I H+ HQ L+ DGPI +
Sbjct: 741 KNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISI 800
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
+L PTREL+ Q++ A+ + + + VYGG++
Sbjct: 801 ILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSN 835
Score = 45 (20.9 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 298 KDEN-KTIIFAETKRKVDKITKSIQN 322
KDE K +IF +TK + K K IQN
Sbjct: 1322 KDEKEKKLIFNKTKEDIKK--KLIQN 1345
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 311 (114.5 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 67/189 (35%), Positives = 108/189 (57%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D+Q M SAT+P +Q +A+ L I+I +G N+NI Q VE+ E +K +L
Sbjct: 904 DKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKG-KTNNNIYQFVEIIEESKKVFRLLK 962
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL + +IF + + D + + Y + + +HG + Q +R + L++F+
Sbjct: 963 LLGEWIKY--GLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEE 1020
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+L+AT V ARG+D+ ++ VIN+ P++ EDYIHRIGRTGRS+N G +YTF
Sbjct: 1021 NKVLIATSVMARGIDIKNIILVINYQCPDHIEDYIHRIGRTGRSNNIGYAYTFILPNEYT 1080
Query: 411 QAKDLIDVL 419
+A D+ ++L
Sbjct: 1081 KAYDIYNLL 1089
Score = 269 (99.8 bits), Expect = 1.8e-51, Sum P(2) = 1.8e-51
Identities = 52/155 (33%), Positives = 89/155 (57%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFRDKH-QMTLKG-NAPNPITEFAEANFPDYVLKEVKR 130
P +KN + + N +V FR + + ++G N P P+ F + P +L+ +++
Sbjct: 681 PIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILQILEK 740
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
+ F + IQ Q P M G +++ +A+TGSGKTL+Y+ P I H+ HQ L+ DGPI +
Sbjct: 741 KNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQEPLRNNDGPISI 800
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
+L PTREL+ Q++ A+ + + + VYGG++
Sbjct: 801 ILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSN 835
Score = 45 (20.9 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 298 KDEN-KTIIFAETKRKVDKITKSIQN 322
KDE K +IF +TK + K K IQN
Sbjct: 1322 KDEKEKKLIFNKTKEDIKK--KLIQN 1345
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 350 (128.3 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 76/177 (42%), Positives = 112/177 (63%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+ Q L++SAT P ++++AE F+ ++++ +T+S NIQQ E +K + L
Sbjct: 176 EHQTLLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVS---NIQQFYLEVQERKKFDTL 232
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL DI S + I+F TKR+VD++ +++ G+AA GIHGD +Q +R L++F+
Sbjct: 233 TRLL-DIQSPE--LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKE 289
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
G +LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ TG + TF T
Sbjct: 290 GAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFIT 346
Score = 196 (74.1 bits), Expect = 6.8e-51, Sum P(2) = 6.8e-51
Identities = 45/115 (39%), Positives = 64/115 (55%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F + N ++K + R GF+ TPIQAQ P+ +S +++G AQTG+GKT A+ +P +
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
IN +S P IV+ APTRELA Q+ E G + +YGG G Q
Sbjct: 65 INPES---PNIQAIVI--APTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQ 114
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 324 (119.1 bits), Expect = 8.3e-51, Sum P(2) = 8.3e-51
Identities = 78/196 (39%), Positives = 114/196 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A L + IN+G +A+ N+ Q VE ++E K+ L
Sbjct: 365 RQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVTQQVEYV---KQEAKVVYL 420
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L D K +IFAE K+ VD I + + G AV IHG K Q+ER + +R G+
Sbjct: 421 L-DCLQKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKK 479
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD +V+ VIN+D P++ E+Y+HRIGRTGRS+ G + T + +
Sbjct: 480 DVLVATDVASKGLDFPNVQHVINYDMPDDIENYVHRIGRTGRSNTKGLATTLINKTTEQS 539
Query: 412 AK-DLIDVLTESNHPV 426
DL +L E V
Sbjct: 540 VLLDLKHLLIEGKQEV 555
Score = 235 (87.8 bits), Expect = 8.3e-51, Sum P(2) = 8.3e-51
Identities = 49/138 (35%), Positives = 78/138 (56%)
Query: 76 KNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNAPNP-ITEFAEANFPDYVLKEVKRQGFD 134
K + P + S E +A R + ++ ++G P+P I F E FP +L + +G
Sbjct: 139 KTAWKPPRYIREMSEEEREAVRHELRILVEGETPSPPIRSFREMKFPKGILNGLAAKGIK 198
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLV 191
PTPIQ QG P ++G +++G+A TGSGKTL ++LP I+ Q P +GP L+
Sbjct: 199 NPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIMFALEQEYSLPFERNEGPYGLI 258
Query: 192 LAPTRELAQQIQEVARDF 209
+ P+RELA+Q E+ + +
Sbjct: 259 ICPSRELAKQTHEIIQHY 276
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 353 (129.3 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 78/194 (40%), Positives = 121/194 (62%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+ Q L++SAT P ++++AE F+ + ++++ +T+S NIQQ E +K + L
Sbjct: 176 EHQTLLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVS---NIQQFYLEVHERKKFDTL 232
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL DI S + I+F TKR+VD++T+++ G+ A GIHGD +Q +R L++F+
Sbjct: 233 TRLL-DIQSPE--LAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQ 289
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G +LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ TG + TF T +
Sbjct: 290 GAIEVLVATDVAARGLDISGVTHVYNFDVPQDPESYVHRIGRTGRAGKTGMAMTFITPRE 349
Query: 409 SRQAKDLIDVLTES 422
KD++ + ++
Sbjct: 350 ----KDMLRAIEQT 359
Score = 192 (72.6 bits), Expect = 8.7e-51, Sum P(2) = 8.7e-51
Identities = 45/115 (39%), Positives = 63/115 (54%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F + + K +KR GF+ TPIQAQ P+ ++ +++G AQTG+GKT A+ +P +
Sbjct: 5 FQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
IN +S P IV+ APTRELA Q+ E G R +YGG G Q
Sbjct: 65 INPES---PNIQAIVI--APTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQ 114
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 349 (127.9 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 70/190 (36%), Positives = 114/190 (60%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
+Q L++SAT P ++ + + FL Y + + + + + +V E + K+ GL
Sbjct: 175 QQTLLFSATLPAPIKTIIKKFLGGYKTVKL----VGREKTVPAIRQVYYELPETEKIEGL 230
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
++ ++S+ + I+F TK++VD++ + + G+AA G+HGD SQ+ER +K F+ G+
Sbjct: 231 VSILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKT 290
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVAARGLD+ DV VINFD P N E YIHRIGRTGR+ G + T + +
Sbjct: 291 ELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKL 350
Query: 412 AKDLIDVLTE 421
K + + + +
Sbjct: 351 LKAIEEAINK 360
Score = 195 (73.7 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 43/110 (39%), Positives = 61/110 (55%)
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
EF + +LK V GF+ PTPIQ + P+ + G N+VG A TG+GKT AY+LP +
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 174 HINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
I + + VL++ PTRELA Q+ + G +R+ VYGG
Sbjct: 63 RIQRGKKAQ------VLIVTPTRELALQVADEVAKLGKYLKVRALAVYGG 106
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 349 (127.9 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 70/190 (36%), Positives = 114/190 (60%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
+Q L++SAT P ++ + + FL Y + + + + + +V E + K+ GL
Sbjct: 175 QQTLLFSATLPAPIKTIIKKFLGGYKTVKL----VGREKTVPAIRQVYYELPETEKIEGL 230
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
++ ++S+ + I+F TK++VD++ + + G+AA G+HGD SQ+ER +K F+ G+
Sbjct: 231 VSILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKT 290
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVAARGLD+ DV VINFD P N E YIHRIGRTGR+ G + T + +
Sbjct: 291 ELLVATDVAARGLDIPDVSHVINFDIPQNPESYIHRIGRTGRAGREGKAITLINYRERKL 350
Query: 412 AKDLIDVLTE 421
K + + + +
Sbjct: 351 LKAIEEAINK 360
Score = 195 (73.7 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 43/110 (39%), Positives = 61/110 (55%)
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
EF + +LK V GF+ PTPIQ + P+ + G N+VG A TG+GKT AY+LP +
Sbjct: 3 EFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQ 62
Query: 174 HINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
I + + VL++ PTRELA Q+ + G +R+ VYGG
Sbjct: 63 RIQRGKKAQ------VLIVTPTRELALQVADEVAKLGKYLKVRALAVYGG 106
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 349 (127.9 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 79/183 (43%), Positives = 116/183 (63%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQV-VEVCAEHEKEN-KL 288
+RQ L++SAT P ++++AE F++ + + + ++ NIQQ +EV HEK+ +
Sbjct: 175 ERQTLLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVP-NIQQYYLEV---HEKKKFDI 230
Query: 289 FGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L DI + + I+F TKR+VD++ +++ G+AA GIHGD SQ +R VL++F+
Sbjct: 231 LTRLLDIQAPE--LAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKE 288
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G ILVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ TG + TF T +
Sbjct: 289 GAIEILVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPRE 348
Query: 409 SRQ 411
Q
Sbjct: 349 IGQ 351
Score = 191 (72.3 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 41/112 (36%), Positives = 65/112 (58%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E V+K ++R GF+ TPIQA+ P+++ +++G AQTG+GKT A+ +P
Sbjct: 1 MTTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPI 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ +N ++ LV+APTRELA Q+ E G+ +R +YGG
Sbjct: 61 VEKVNVKNSAVQA-----LVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGG 107
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 328 (120.5 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 78/198 (39%), Positives = 113/198 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT P+++Q A+ L I IN+G ++ IQ+V V ++E K+ L
Sbjct: 220 RQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVIQEVEYV----KEEAKMVYL 275
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K +IFAE K VD I + + G AV IHG K Q+ER ++ F+ G+
Sbjct: 276 LECLQ-KTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKK 334
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ V+N+D P E+Y+HRIGRTGRS TG + TF +
Sbjct: 335 DVLVATDVASKGLDFPAIQHVVNYDMPEEIENYVHRIGRTGRSGKTGIATTFINKGCDES 394
Query: 412 A-KDLIDVLTESNHPVDP 428
DL +L E+ V P
Sbjct: 395 VLMDLKALLVEAKQKVPP 412
Score = 209 (78.6 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 44/108 (40%), Positives = 65/108 (60%)
Query: 97 RDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVG 155
R K+ + ++G P PI F E FP +LK +K++G PTPIQ QG P +SG +M+G
Sbjct: 20 RKKYHILVEGEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSGRDMIG 79
Query: 156 VAQTGSGKTLAYMLPAIVHINHQSQLKP---GDGPIVLVLAPTRELAQ 200
+A TGSGKTL + LP I+ Q + P +GP L++ P+ +A+
Sbjct: 80 IAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSVNVAK 127
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 341 (125.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 82/206 (39%), Positives = 121/206 (58%)
Query: 231 DRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
+RQ LM+SAT+P VQ+ A FL ++Y+ I I + +AN + Q E C EK++KL
Sbjct: 528 NRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIG-AANKCVLQEFERCERSEKKDKLL 586
Query: 290 GLLN-DISS----KDEN----KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERD 340
LL DI S K KT++F + D + + + A+ IHG + Q+ER
Sbjct: 587 ELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERS 646
Query: 341 YVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTS 400
L++FRNG +L+AT VA RGLD+ V VIN+D P+N +DYIHRIGRTGR N+G +
Sbjct: 647 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRA 706
Query: 401 YTFFTQQNSRQAKDLIDVLTESNHPV 426
+F ++ S + +L+ VL ++ V
Sbjct: 707 TSFISEDCSLLS-ELVGVLADAQQIV 731
Score = 210 (79.0 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 47/121 (38%), Positives = 65/121 (53%)
Query: 111 PITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
P FAEAN + + K V G+ + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 171 AIVHINHQSQLKP-GDG---PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASK 226
+ + + L G+G P ++L PTRELA QI R F T + VYGG +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 227 G 227
G
Sbjct: 459 G 459
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 341 (125.1 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 82/206 (39%), Positives = 121/206 (58%)
Query: 231 DRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
+RQ LM+SAT+P VQ+ A FL ++Y+ I I + +AN + Q E C EK++KL
Sbjct: 528 NRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIG-AANKCVLQEFERCERSEKKDKLL 586
Query: 290 GLLN-DISS----KDEN----KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERD 340
LL DI S K KT++F + D + + + A+ IHG + Q+ER
Sbjct: 587 ELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITIHGAREQRERS 646
Query: 341 YVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTS 400
L++FRNG +L+AT VA RGLD+ V VIN+D P+N +DYIHRIGRTGR N+G +
Sbjct: 647 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNSGRA 706
Query: 401 YTFFTQQNSRQAKDLIDVLTESNHPV 426
+F ++ S + +L+ VL ++ V
Sbjct: 707 TSFISEDCSLLS-ELVGVLADAQQIV 731
Score = 210 (79.0 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 47/121 (38%), Positives = 65/121 (53%)
Query: 111 PITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
P FAEAN + + K V G+ + TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 171 AIVHINHQSQLKP-GDG---PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASK 226
+ + + L G+G P ++L PTRELA QI R F T + VYGG +
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
Query: 227 G 227
G
Sbjct: 459 G 459
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 346 (126.9 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 78/185 (42%), Positives = 116/185 (62%)
Query: 233 QVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
Q L++SAT P ++++AE F+ +I++ +T+ NIQQ E +K + L
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP---NIQQFYLEVQEKKKFDVLTR 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL DI S + I+F TKR+VD++++++ G+AA GIHGD +Q +R VL++F+ G
Sbjct: 234 LL-DIQSPE--LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ G + F T + S
Sbjct: 291 IEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESG 350
Query: 411 QAKDL 415
Q K++
Sbjct: 351 QLKNI 355
Score = 191 (72.3 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E D +L+ V+ GF+ TPIQA+ P A+ G +++G AQTG+GKT A+ LP
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ ++ + G +V+APTRELA Q+ E G +R +YGG
Sbjct: 61 LDKVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGG 107
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 346 (126.9 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 78/185 (42%), Positives = 116/185 (62%)
Query: 233 QVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
Q L++SAT P ++++AE F+ +I++ +T+ NIQQ E +K + L
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP---NIQQFYLEVQEKKKFDVLTR 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL DI S + I+F TKR+VD++++++ G+AA GIHGD +Q +R VL++F+ G
Sbjct: 234 LL-DIQSPE--LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ G + F T + S
Sbjct: 291 IEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESG 350
Query: 411 QAKDL 415
Q K++
Sbjct: 351 QLKNI 355
Score = 191 (72.3 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E D +L+ V+ GF+ TPIQA+ P A+ G +++G AQTG+GKT A+ LP
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ ++ + G +V+APTRELA Q+ E G +R +YGG
Sbjct: 61 LDKVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGG 107
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 346 (126.9 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 78/185 (42%), Positives = 116/185 (62%)
Query: 233 QVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
Q L++SAT P ++++AE F+ +I++ +T+ NIQQ E +K + L
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP---NIQQFYLEVQEKKKFDVLTR 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL DI S + I+F TKR+VD++++++ G+AA GIHGD +Q +R VL++F+ G
Sbjct: 234 LL-DIQSPE--LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ G + F T + S
Sbjct: 291 IEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESG 350
Query: 411 QAKDL 415
Q K++
Sbjct: 351 QLKNI 355
Score = 191 (72.3 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E D +L+ V+ GF+ TPIQA+ P A+ G +++G AQTG+GKT A+ LP
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ ++ + G +V+APTRELA Q+ E G +R +YGG
Sbjct: 61 LDKVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGG 107
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 346 (126.9 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 78/185 (42%), Positives = 116/185 (62%)
Query: 233 QVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
Q L++SAT P ++++AE F+ +I++ +T+ NIQQ E +K + L
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP---NIQQFYLEVQEKKKFDVLTR 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL DI S + I+F TKR+VD++++++ G+AA GIHGD +Q +R VL++F+ G
Sbjct: 234 LL-DIQSPE--LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ G + F T + S
Sbjct: 291 IEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESG 350
Query: 411 QAKDL 415
Q K++
Sbjct: 351 QLKNI 355
Score = 191 (72.3 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E D +L+ V+ GF+ TPIQA+ P A+ G +++G AQTG+GKT A+ LP
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ ++ + G +V+APTRELA Q+ E G +R +YGG
Sbjct: 61 LDKVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGG 107
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 346 (126.9 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 78/185 (42%), Positives = 116/185 (62%)
Query: 233 QVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
Q L++SAT P ++++AE F+ +I++ +T+ NIQQ E +K + L
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP---NIQQFYLEVQEKKKFDVLTR 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL DI S + I+F TKR+VD++++++ G+AA GIHGD +Q +R VL++F+ G
Sbjct: 234 LL-DIQSPE--LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ G + F T + S
Sbjct: 291 IEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESG 350
Query: 411 QAKDL 415
Q K++
Sbjct: 351 QLKNI 355
Score = 191 (72.3 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E D +L+ V+ GF+ TPIQA+ P A+ G +++G AQTG+GKT A+ LP
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ ++ + G +V+APTRELA Q+ E G +R +YGG
Sbjct: 61 LDKVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGG 107
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 346 (126.9 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 78/185 (42%), Positives = 116/185 (62%)
Query: 233 QVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
Q L++SAT P ++++AE F+ +I++ +T+ NIQQ E +K + L
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP---NIQQFYLEVQEKKKFDVLTR 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL DI S + I+F TKR+VD++++++ G+AA GIHGD +Q +R VL++F+ G
Sbjct: 234 LL-DIQSPE--LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ G + F T + S
Sbjct: 291 IEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESG 350
Query: 411 QAKDL 415
Q K++
Sbjct: 351 QLKNI 355
Score = 191 (72.3 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E D +L+ V+ GF+ TPIQA+ P A+ G +++G AQTG+GKT A+ LP
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ ++ + G +V+APTRELA Q+ E G +R +YGG
Sbjct: 61 LDKVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGG 107
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 346 (126.9 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
Identities = 78/185 (42%), Positives = 116/185 (62%)
Query: 233 QVLMWSATWPREVQKLAEDFLDS--YIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
Q L++SAT P ++++AE F+ +I++ +T+ NIQQ E +K + L
Sbjct: 177 QTLLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP---NIQQFYLEVQEKKKFDVLTR 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL DI S + I+F TKR+VD++++++ G+AA GIHGD +Q +R VL++F+ G
Sbjct: 234 LL-DIQSPE--LAIVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVAARGLD+ V V NFD P + E Y+HRIGRTGR+ G + F T + S
Sbjct: 291 IEVLVATDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGIAMLFVTPRESG 350
Query: 411 QAKDL 415
Q K++
Sbjct: 351 QLKNI 355
Score = 191 (72.3 bits), Expect = 2.1e-49, Sum P(2) = 2.1e-49
Identities = 43/112 (38%), Positives = 64/112 (57%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T F E D +L+ V+ GF+ TPIQA+ P A+ G +++G AQTG+GKT A+ LP
Sbjct: 1 MTTFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPL 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+ ++ + G +V+APTRELA Q+ E G +R +YGG
Sbjct: 61 LDKVDTHKESVQG-----IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGG 107
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 96/160 (60%), Positives = 121/160 (75%)
Query: 71 LPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVK 129
LP FEKNF+ P + R+ EV+ +R ++T++G N P P+ F EANFP V+ +
Sbjct: 51 LPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIA 110
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIV 189
RQ F PT IQAQGWP+A+SG +MVGVAQTGSGKTL+Y+LPAIVHINHQ L+ GDGPI
Sbjct: 111 RQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPIC 170
Query: 190 LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVLAPTRELAQQ+Q+VA ++ + L+STC+YGGA KGPQ
Sbjct: 171 LVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 310 (114.2 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 66/184 (35%), Positives = 102/184 (55%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P RQ L++SAT P +++ LA+D L + + +G T++ + + +H K L
Sbjct: 174 PRRQTLLFSATMPIDIRTLAQDILVDPVTVQVG--TVAPAVTVAHALYPVEQHLKTPLLL 231
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
LL D +IF TK + ++ + ++ G+ A + G+ SQ R L FR+G
Sbjct: 232 ELLRHT---DTESVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDG 288
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
ILVATD+AARG+DV V VIN+D P+ +E YIHRIGRTGR+ +G ++T T +
Sbjct: 289 TFQILVATDIAARGIDVSQVSHVINYDIPDTAEAYIHRIGRTGRAARSGDAFTLVTSDDG 348
Query: 410 RQAK 413
+
Sbjct: 349 AMVR 352
Score = 221 (82.9 bits), Expect = 2.6e-49, Sum P(2) = 2.6e-49
Identities = 52/118 (44%), Positives = 71/118 (60%)
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
+F F V + G++ PTPIQAQ P M+G +++G+AQTG+GKT A+ LP I+
Sbjct: 2 DFKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALP-IL 60
Query: 174 HINHQSQLKPGD-GPI-VLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
H +L+ G+ G + LV+APTRELA+QI + G T LRS VYGG PQ
Sbjct: 61 H-----RLQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQ 113
>DICTYBASE|DDB_G0292010 [details] [associations]
symbol:DDB_G0292010 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0292010 GO:GO:0005524
EMBL:AAFI02000187 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
ProtClustDB:CLSZ2846571 RefSeq:XP_629765.1
ProteinModelPortal:Q54DV7 EnsemblProtists:DDB0184159 GeneID:8628441
KEGG:ddi:DDB_G0292010 InParanoid:Q54DV7 OMA:VESSCKP Uniprot:Q54DV7
Length = 777
Score = 294 (108.6 bits), Expect = 8.7e-49, Sum P(3) = 8.7e-49
Identities = 68/184 (36%), Positives = 105/184 (57%)
Query: 260 NIGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKD---ENKTII--FAETKRKV- 313
N GS ++ + N++QVV+ AE EK L +N I K+ N+++I F T + V
Sbjct: 531 NQGSTSIISK-NVKQVVKPIAEKEKSKYLTTFINSIMKKELLLRNRSLILIFVNTIKSVK 589
Query: 314 ------DKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGILVATDVAARGLDVD 367
+K+ + + IHGD Q ERD V+ F++G+ ILVATD+ RG+ +
Sbjct: 590 PILTVIEKMCDQFRERKYKCGAIHGDMKQFERDSVIDNFKSGKISILVATDILGRGIHIG 649
Query: 368 -DVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ--QNSRQAKDLIDVLTESNH 424
+++FVIN+D+P++ E Y+HR+GRTGR N G + T FT QN+ A+ LI +L E
Sbjct: 650 GNLRFVINYDFPSSLEQYVHRVGRTGRQGNKGHALTLFTDTPQNTPMARGLIKILEECKQ 709
Query: 425 PVDP 428
+ P
Sbjct: 710 QISP 713
Score = 173 (66.0 bits), Expect = 8.7e-49, Sum P(3) = 8.7e-49
Identities = 42/128 (32%), Positives = 65/128 (50%)
Query: 64 RAIDWGNLPPFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKGNA---PNPITEFAEANF 120
+ I + LPP +K ++ + L H + K ++ + P PI F + +
Sbjct: 232 KEIQFKELPPIKKRYWKDTMKQLTSEDHREMRIKIKANVSTSFDGQEIPRPIITFEDQDL 291
Query: 121 PDYVLKEV-----KRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
P + K + K PTP+Q+Q WP +SG +++ +AQTGSGKTL Y+LPAI +I
Sbjct: 292 PLSMKKFIGFLTTKYPSITAPTPVQSQCWPGILSGQDILSIAQTGSGKTLGYLLPAIPNI 351
Query: 176 -NHQSQLK 182
H Q K
Sbjct: 352 LEHLRQRK 359
Score = 120 (47.3 bits), Expect = 7.9e-24, Sum P(3) = 7.9e-24
Identities = 34/104 (32%), Positives = 58/104 (55%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSA------NHNIQQVVEVCAEH 282
+PDRQ LM+SAT+P+ +Q A+ +L + ++I + S + + + N++QVV+ AE
Sbjct: 493 RPDRQTLMFSATFPQTMQDAAKKWLTNPLKIRVKSSSTNQGSTSIISKNVKQVVKPIAEK 552
Query: 283 EKENKLFGLLNDISSKD---ENKTII--FAETKRKVDKITKSIQ 321
EK L +N I K+ N+++I F T + V I I+
Sbjct: 553 EKSKYLTTFINSIMKKELLLRNRSLILIFVNTIKSVKPILTVIE 596
Score = 100 (40.3 bits), Expect = 8.7e-49, Sum P(3) = 8.7e-49
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 186 GPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPD 231
GP+VL++ PTRELA+Q++ + S + S +YGG Q D
Sbjct: 386 GPMVLIIVPTRELAKQVESSCKPLRSKFNIHSIAIYGGVDANEQKD 431
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 293 (108.2 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 67/173 (38%), Positives = 101/173 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAE-HEKENKLFG 290
RQ L+++AT + +LA L +I+I T + + +I+Q + V + H K L
Sbjct: 179 RQTLLFTATMDSAMARLAGRLLREPERIDIAG-TKTTHEHIEQRLHVADDLHHKNRLLRH 237
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L+ D S + + IIF+ TKR + + ++ G +A +HGD Q R+ + + GR
Sbjct: 238 LITDESLR---RAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGR 294
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTF 403
+LVATDVAARGLDV + VINFD P +EDY+HRIGRTGR+ +G + +F
Sbjct: 295 IRLLVATDVAARGLDVTGISHVINFDLPKFAEDYVHRIGRTGRAGASGIAISF 347
Score = 236 (88.1 bits), Expect = 1.0e-48, Sum P(2) = 1.0e-48
Identities = 48/109 (44%), Positives = 68/109 (62%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
FAE ++LK V G+ PTP+QA P A+ +++ AQTG+GKT A++LPA+
Sbjct: 3 FAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQR 62
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
++ Q PG GP VLVL PTRELAQQ+ + R +G+ +RS + GG
Sbjct: 63 LSSPPQ-GPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGG 110
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 315 (115.9 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 66/168 (39%), Positives = 105/168 (62%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
DRQ L++SAT+ E++ LA+ +++ ++I++ + N ++V + +K+ K
Sbjct: 185 DRQNLLFSATFSPEIRALAKGMVNNPLEISVDA----ENSTAEKVTQWLTAVDKKRKPAV 240
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L + I + + ++F +TK +K+TK ++ G A IHG+KSQ R L F++G
Sbjct: 241 LTHLIKENNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGS 300
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTG 398
ILVATD+AARG+D+D + V+NFD PN EDY+HRIGRT R+ NTG
Sbjct: 301 VKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTG 348
Score = 211 (79.3 bits), Expect = 1.2e-48, Sum P(2) = 1.2e-48
Identities = 44/118 (37%), Positives = 66/118 (55%)
Query: 113 TEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAI 172
T+F + + +LK V+ +G++ P+PIQAQ P +SG +++ AQTG+GKT + LP +
Sbjct: 6 TKFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLL 65
Query: 173 VHINHQSQLKPGDGPI-VLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
++ K + L+L PTRELA QI E +G L S V+GG PQ
Sbjct: 66 QRLSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQ 123
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 319 (117.4 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 76/192 (39%), Positives = 109/192 (56%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT PR++Q A+ L I +N+G +A+ N+ Q +E ENKL +
Sbjct: 378 RQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQELEFV---RSENKLVRV 433
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L + K K +IFAE K VD I + + G IHG K Q +R ++ FR
Sbjct: 434 LECLQ-KTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGGKDQSDRHAGIEAFRKNEK 492
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVA++GLD ++ VINFD P + E+Y+HRIGRTGRS G + TF +++
Sbjct: 493 DVLVATDVASKGLDFQGIEHVINFDMPEDIENYVHRIGRTGRSGRKGLATTFINKKSEMS 552
Query: 412 A-KDLIDVLTES 422
DL +L E+
Sbjct: 553 VLSDLKQLLAEA 564
Score = 220 (82.5 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 55/156 (35%), Positives = 86/156 (55%)
Query: 58 TMGGALRAIDWGNLPPFEK------NFFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APN 110
T GG L A+ L EK + P + +S + + R + ++ +G+ P
Sbjct: 129 TRGGGLLAV--AELTKGEKYEEPIVTAWRPPGHIRRQSQEDYEIQRKRLGISCEGDHIPP 186
Query: 111 PITEFAEANFPDYVLKEVKRQ-GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYML 169
PI F E FP +L+ +++Q G PT IQ QG P+A+SG +M+G+A TGSGKT+ ++L
Sbjct: 187 PIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVL 246
Query: 170 PAIVHINHQSQLKP---GDGPIVLVLAPTRELAQQI 202
P ++ Q P +GP L++ P+RELA+QI
Sbjct: 247 PLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQI 282
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 308 (113.5 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
Identities = 72/196 (36%), Positives = 110/196 (56%)
Query: 225 SKGPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEK 284
+K RQ L +SAT P+ V+ LA FL + ++++ +A I+Q VC +
Sbjct: 179 AKNVPSKRQTLFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGR-IEQ--RVCFVEQP 235
Query: 285 ENKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLK 344
E K L+ I + I+F TK D + K + +V IHG+KSQ +R+ L+
Sbjct: 236 E-KASLLIEKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALE 294
Query: 345 EFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFF 404
F+ GR ILVATD+AARG+ VD + VIN+D P+ E ++HRIGRT R+ N+G + +F
Sbjct: 295 AFKAGRVPILVATDIAARGIHVDALTHVINYDLPDVPEQFVHRIGRTARAGNSGVAISFC 354
Query: 405 TQQNSRQAKDLIDVLT 420
++ + R I+ LT
Sbjct: 355 SR-DERPTLRAIEKLT 369
Score = 215 (80.7 bits), Expect = 3.4e-48, Sum P(2) = 3.4e-48
Identities = 47/118 (39%), Positives = 67/118 (56%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+++F +L + + G+ PTPIQ Q P+ + G ++VG+AQTG+GKTLA+ P
Sbjct: 6 MSDFQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPI 65
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ ++ + P G VLVLAPTRELA QI +G+ LR V GGA G Q
Sbjct: 66 LDRLSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQ 123
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 314 (115.6 bits), Expect = 4.1e-48, Sum P(2) = 4.1e-48
Identities = 74/200 (37%), Positives = 109/200 (54%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLT--LSANHNIQQVVEVCAEHEKEN 286
QP Q L++SAT P EV+KL + + + I IG+ S +H++ V H+K
Sbjct: 174 QP-HQTLLFSATMPPEVRKLTLETQTNPVTIQIGTQAPASSVSHSVYPV----KNHQKTP 228
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
L +L +K +IFA TK + + I G+ + G+ SQ R V++ F
Sbjct: 229 LLIEILKTTETKS---VLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGF 285
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
R G ILVATD+AARGLD+D + VIN+D P+ EDY HRIGRTGR D TG + + T
Sbjct: 286 RRGNFKILVATDIAARGLDIDHISHVINYDMPDTPEDYTHRIGRTGRFDRTGQALSLVTG 345
Query: 407 QNSRQAKDLIDVLTESNHPV 426
++ +D+ ++ N P+
Sbjct: 346 RDGDMVRDIQKLI---NSPI 362
Score = 217 (81.4 bits), Expect = 4.1e-48, Sum P(2) = 4.1e-48
Identities = 51/116 (43%), Positives = 64/116 (55%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F NF V+ V+ G+ PTPIQAQ P + G +++G+AQTG+GKT AY LP I
Sbjct: 3 FESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVI-- 60
Query: 175 INHQSQLKPGDGPI-VLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
Q L G + LVLAPTRELA QI E R G +R +YGG + Q
Sbjct: 61 ---QKMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQ 113
>WB|WBGene00001599 [details] [associations]
symbol:glh-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 341 (125.1 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 81/206 (39%), Positives = 121/206 (58%)
Query: 231 DRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
+RQ LM+SAT+P VQ+ A + L + YI + I + +AN + Q E C EK++KL
Sbjct: 739 NRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIG-AANKCVLQEFEKCDRSEKKDKLL 797
Query: 290 GLLN-DISS--KDEN------KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERD 340
+L DI S ++N KTI+F + D + + + A+ IHG + Q+ER
Sbjct: 798 EILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERS 857
Query: 341 YVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTS 400
L++FRNG +L+AT VA RGLD+ V VIN+D P+N +DYIHRIGRTGR N G +
Sbjct: 858 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRA 917
Query: 401 YTFFTQQNSRQAKDLIDVLTESNHPV 426
T F ++ +L+ VL++++ V
Sbjct: 918 -TSFISEDCNLLSELVRVLSDADQLV 942
Score = 197 (74.4 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 44/117 (37%), Positives = 64/117 (54%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F+EAN + + K V G+ + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 175 INHQSQLKP-GDG---PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKG 227
+ ++ L G+G P ++L PTREL QI R F T + VYGG + G
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVG 670
>UNIPROTKB|Q966L9 [details] [associations]
symbol:glh-2 "ATP-dependent RNA helicase glh-2"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:FO080958 GO:GO:0043186 GeneTree:ENSGT00620000087942
EMBL:U60194 EMBL:U60449 RefSeq:NP_491876.1
ProteinModelPortal:Q966L9 SMR:Q966L9 IntAct:Q966L9 STRING:Q966L9
PaxDb:Q966L9 EnsemblMetazoa:C55B7.1 GeneID:172361
KEGG:cel:CELE_C55B7.1 UCSC:C55B7.1.2 CTD:172361 WormBase:C55B7.1
HOGENOM:HOG000112735 InParanoid:Q966L9 OMA:PREGRNG NextBio:875199
Uniprot:Q966L9
Length = 974
Score = 341 (125.1 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 81/206 (39%), Positives = 121/206 (58%)
Query: 231 DRQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
+RQ LM+SAT+P VQ+ A + L + YI + I + +AN + Q E C EK++KL
Sbjct: 739 NRQTLMFSATFPDSVQEAARNHLKEGYIMLAIDKIG-AANKCVLQEFEKCDRSEKKDKLL 797
Query: 290 GLLN-DISS--KDEN------KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERD 340
+L DI S ++N KTI+F + D + + + A+ IHG + Q+ER
Sbjct: 798 EILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLASILSSAQVPAITIHGAREQRERS 857
Query: 341 YVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTS 400
L++FRNG +L+AT VA RGLD+ V VIN+D P+N +DYIHRIGRTGR N G +
Sbjct: 858 EALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIHRIGRTGRVGNAGRA 917
Query: 401 YTFFTQQNSRQAKDLIDVLTESNHPV 426
T F ++ +L+ VL++++ V
Sbjct: 918 -TSFISEDCNLLSELVRVLSDADQLV 942
Score = 197 (74.4 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
Identities = 44/117 (37%), Positives = 64/117 (54%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F+EAN + + K V G+ + TPIQ P+ G +++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 175 INHQSQLKP-GDG---PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKG 227
+ ++ L G+G P ++L PTREL QI R F T + VYGG + G
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVG 670
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 322 (118.4 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 68/194 (35%), Positives = 118/194 (60%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT+ +E+++L + L S I + +A I VV + +++ +L
Sbjct: 192 RQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAAR-ITHVVHP-VDRQRKRELLSF 249
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+ I SK+ + ++F TK +++++ +++ G ++ IHG+KSQ R L +F+ G+
Sbjct: 250 M--IGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKI 307
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVAARGLD+D + VINF+ P+ ++DY+HR+GRTGR+ N G + + + R
Sbjct: 308 RVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRL 367
Query: 412 AKDLIDVLTESNHP 425
+D I+ L +S P
Sbjct: 368 LRD-IEKLLQSKMP 380
Score = 191 (72.3 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 124 VLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHIN-HQSQLK 182
+L+ ++ QG+ PTP+Q Q P+ + +++ AQTG+GKT + LP + + + L+
Sbjct: 21 LLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVSRPPLQ 80
Query: 183 PGDGPIV--LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
P++ L+L PTRELA Q+ E R +G L++T V+GG S PQ
Sbjct: 81 RSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 322 (118.4 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 68/194 (35%), Positives = 118/194 (60%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT+ +E+++L + L S I + +A I VV + +++ +L
Sbjct: 192 RQNLLFSATFSKEIKELTDKLLHSPALIEVARRNTAAAR-ITHVVHP-VDRQRKRELLSF 249
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+ I SK+ + ++F TK +++++ +++ G ++ IHG+KSQ R L +F+ G+
Sbjct: 250 M--IGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGKI 307
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVAARGLD+D + VINF+ P+ ++DY+HR+GRTGR+ N G + + + R
Sbjct: 308 RVLVATDVAARGLDIDKLPHVINFELPDAAKDYVHRVGRTGRASNDGVAISLVSGDEVRL 367
Query: 412 AKDLIDVLTESNHP 425
+D I+ L +S P
Sbjct: 368 LRD-IEKLLQSKMP 380
Score = 191 (72.3 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 40/109 (36%), Positives = 65/109 (59%)
Query: 124 VLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHIN-HQSQLK 182
+L+ ++ QG+ PTP+Q Q P+ + +++ AQTG+GKT + LP + + + L+
Sbjct: 21 LLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFVSRPPLQ 80
Query: 183 PGDGPIV--LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
P++ L+L PTRELA Q+ E R +G L++T V+GG S PQ
Sbjct: 81 RSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQ 129
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 316 (116.3 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 71/191 (37%), Positives = 113/191 (59%)
Query: 225 SKGPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEK 284
SK P+ RQ L++SAT P E++ LAE L +I I + T++ + Q V + +K
Sbjct: 175 SKLPK-SRQTLLFSATMPAEIEILAEAILTDPTKIQITAETVTIDLVNQSVYHL----DK 229
Query: 285 ENKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLK 344
NK+ L N ++ D K +IF +TK D I K+++ A +H K+Q R+ L+
Sbjct: 230 SNKVPLLFNILTKADYEKVLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQ 289
Query: 345 EFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFF 404
F++ +LVATDVAARG+DVD++ VIN++ P + +YIHRIGRT R+ +G + +F
Sbjct: 290 NFKDSTLRVLVATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFA 349
Query: 405 TQQNSRQAKDL 415
+ + RQ ++
Sbjct: 350 VENDIRQLTNI 360
Score = 194 (73.4 bits), Expect = 4.2e-47, Sum P(2) = 4.2e-47
Identities = 41/120 (34%), Positives = 66/120 (55%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
++EF + + ++ V +G+ +PTPIQ + P ++G++++G+AQTG+GKT A+ LP
Sbjct: 1 MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPI 60
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPD 231
I L+L PTRELA QI + D+ L++ VYGG + Q D
Sbjct: 61 INKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVD 120
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 315 (115.9 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 67/184 (36%), Positives = 113/184 (61%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ LM+SAT+ E+++LA+ ++ ++I++ +A ++Q + C +K K L
Sbjct: 179 RQNLMFSATFSDEIRELAKGLVNHPVEISVTPRNAAAT-TVKQWI--CPV-DKTQKSALL 234
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+ I ++ + ++F+ TK +++ KS+ +A IHG+KSQ R L +F++G
Sbjct: 235 IQLIKQENWQQVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEV 294
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATD+AARGLD+D + V+NFD PN EDY+HRIGRTGR+ TG + + + + +
Sbjct: 295 RVLVATDIAARGLDIDQLPQVVNFDLPNVPEDYVHRIGRTGRAGATGQAVSLVSSEEIKL 354
Query: 412 AKDL 415
KD+
Sbjct: 355 LKDI 358
Score = 204 (76.9 bits), Expect = 4.9e-47, Sum P(2) = 4.9e-47
Identities = 44/104 (42%), Positives = 59/104 (56%)
Query: 126 KEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGD 185
K V QG+D P+PIQAQ P ++G +++ AQTG+GKT + LP + + + K G
Sbjct: 14 KAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAKGHKAKSGQ 73
Query: 186 GPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
LVL PTRELA Q+ E +G LRS V+GG PQ
Sbjct: 74 TR-ALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQ 116
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 319 (117.4 bits), Expect = 6.9e-47, Sum P(2) = 6.9e-47
Identities = 78/200 (39%), Positives = 110/200 (55%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCA----EHEKENK 287
RQ L +SAT E++++ FL + +I + +A+ I+Q V + + E K
Sbjct: 179 RQTLFFSATMAPEIERITNTFLSAPARIEVARQA-TASETIEQGVVLFKGSRRDREASEK 237
Query: 288 LFGLLNDISSKDENKT--IIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
L I ++ E T IIF K VD + KS+Q YG+ A IHGD Q +R L
Sbjct: 238 RAVLRALIDAEGEKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDG 297
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
FR G+ +LVA+DVAARGLDV V V NFD P + EDY+HRIGRTGR+ G + T
Sbjct: 298 FREGKLRLLVASDVAARGLDVPSVSHVFNFDVPGHPEDYVHRIGRTGRAGRDGKAITLCI 357
Query: 406 QQNSRQAKDLIDVLTESNHP 425
++ + A D I+ L + + P
Sbjct: 358 PRDEK-ALDAIEKLIQKDIP 376
Score = 190 (71.9 bits), Expect = 6.9e-47, Sum P(2) = 6.9e-47
Identities = 44/115 (38%), Positives = 67/115 (58%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+T+F+E N VLK ++ G++ PTPIQA P A+ G +++G+AQTG+GKT ++ LP
Sbjct: 1 MTKFSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM 60
Query: 172 IVHINH-QSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
I + +++ + P LVL PTRELA Q+ E + L + GG S
Sbjct: 61 ITLLARGRARARM---PRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVS 112
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 303 (111.7 bits), Expect = 9.7e-47, Sum P(2) = 9.7e-47
Identities = 66/187 (35%), Positives = 103/187 (55%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q L+ SAT P Q+LAE + I IG N++Q+V E K+ KLF
Sbjct: 348 DHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQPCA-NVRQIVLWVEEPSKKKKLFE 406
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D + +++Q V IH DK Q ER+ ++K G
Sbjct: 407 ILND-EKLYQPPVVVFVDCKLGADLLCEAVQKVMSLNTVAIHSDKMQWERNKIVKGLLEG 465
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ ++++T + RGLD+ +VK VINFD P+N ++Y+H+IGR GR + GT+ TF N
Sbjct: 466 QFDVVISTGILGRGLDLVNVKLVINFDMPSNMDEYVHQIGRAGRLGHRGTAITFMNNNNK 525
Query: 410 RQAKDLI 416
R +++
Sbjct: 526 RLFLEMV 532
Score = 217 (81.4 bits), Expect = 9.7e-47, Sum P(2) = 9.7e-47
Identities = 44/123 (35%), Positives = 69/123 (56%)
Query: 111 PITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
P+ EF FP + + +K G++ PTP+Q Q P+ ++G +++ A TGSGKT+A++LP
Sbjct: 168 PVIEFQHCRFPTVLERNLKAAGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLP 227
Query: 171 AIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSST-YLRSTCVYGGASKGPQ 229
++ P P L+L PTRELA QI+E A++ +R+ + GG PQ
Sbjct: 228 VVMRALQSESASPSC-PACLILTPTRELAIQIEEQAKELMRGLPNMRTALLVGGMPLPPQ 286
Query: 230 PDR 232
R
Sbjct: 287 LHR 289
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 286 (105.7 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 62/189 (32%), Positives = 109/189 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT+ +++ LAE L + ++I + +++ Q V V + ++E L
Sbjct: 181 RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRE-----L 235
Query: 292 LNDISSKDE-NKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L+ + K + ++F TK + + + + G + IHG+KSQ R L +F++G
Sbjct: 236 LSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGD 295
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATD+AARGLD++++ V+N++ PN EDY+HRIGRTGR+ TG + + +
Sbjct: 296 IRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHK 355
Query: 411 QAKDLIDVL 419
+D+ +L
Sbjct: 356 LLRDIEKLL 364
Score = 223 (83.6 bits), Expect = 2.1e-46, Sum P(2) = 2.1e-46
Identities = 50/111 (45%), Positives = 65/111 (58%)
Query: 121 PDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH-INHQS 179
PD +L+ V QG+ PTPIQ Q P + G +++ AQTG+GKT + LP + H I Q
Sbjct: 10 PD-ILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITRQP 68
Query: 180 QLKPGDGPI-VLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
K G P+ L+L PTRELA QI E RD+ +RS V+GG S PQ
Sbjct: 69 HAK-GRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQ 118
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 305 (112.4 bits), Expect = 2.5e-46, Sum P(2) = 2.5e-46
Identities = 63/158 (39%), Positives = 92/158 (58%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQ 131
PF KNF+ + + V A+R + ++ + G + P PI + + +L +K+
Sbjct: 355 PFRKNFYIEVKDISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKL 414
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLV 191
+++P PIQAQ PI MSG + +GVA+TGSGKTL ++LP + HI Q ++ GDGPI LV
Sbjct: 415 NYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLV 474
Query: 192 LAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+APTREL QQI R F + + VYGG+ Q
Sbjct: 475 MAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQ 512
Score = 221 (82.9 bits), Expect = 2.5e-46, Sum P(2) = 2.5e-46
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 301 NKTII-FAETKRKVDKITKSIQNYG-WAAVG-IHGDKSQQERDYVLKEFRNGRAGILVAT 357
NK I E + + ++ ++ ++ G W G + QE+ + +F++ +L+AT
Sbjct: 614 NKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQEKS--ISDFKSDVCNLLIAT 671
Query: 358 DVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQAKDLID 417
VAARGLDV +++ V+NFD PN+ EDY+HR+GRTGR+ G + TF ++ +++ A DL+
Sbjct: 672 SVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVK 731
Query: 418 VLTESNHPV 426
L S PV
Sbjct: 732 ALELSEQPV 740
Score = 144 (55.7 bits), Expect = 3.0e-38, Sum P(2) = 3.0e-38
Identities = 46/157 (29%), Positives = 77/157 (49%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKL 288
+PDRQ +++SAT+PR+V+ LA L+ ++I +G ++ N +I Q+VE+ E E+ ++L
Sbjct: 575 RPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV-VNKDITQLVEIRPESERFSRL 633
Query: 289 FGLLNDISSKDENKTIIFAETKRK-VDKITKSIQNY----GWAAVG---------IHGDK 334
LL + K K ++F ++ K + + N AA G ++ D
Sbjct: 634 LELLGEWYEK--GKVLVFVRSQEKSISDFKSDVCNLLIATSVAARGLDVKELELVVNFDA 691
Query: 335 SQQERDYVLKEFRNGRAGILVATDVAARGLDVDDVKF 371
DYV + R GRAG A + DD K+
Sbjct: 692 PNHYEDYVHRVGRTGRAG---RKGCAVTFISEDDAKY 725
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 290 (107.1 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 59/187 (31%), Positives = 107/187 (57%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q ++ SAT P ++ LA L ++++I IG L + N++Q++ E K+ KLF
Sbjct: 383 DHQTILVSATIPVGIEHLANQLLHNFVRITIGEKNLPCS-NVRQIILWVEEPSKKKKLFE 441
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D ++ ++ G +H +KSQ ER +L+
Sbjct: 442 ILND-KKLFKPPVLVFVDCKLGADLLSDAVHKITGLQCTSMHSEKSQVERTAILQGLLQE 500
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ ++V+T V RGLD+ +VK V+NFD P++ ++Y+H++GR GR ++GT+ TF +
Sbjct: 501 KYEVIVSTGVLGRGLDLVNVKLVVNFDMPSSMDEYVHQVGRAGRLGHSGTAITFINNNSK 560
Query: 410 RQAKDLI 416
+ D++
Sbjct: 561 KLFWDVV 567
Score = 228 (85.3 bits), Expect = 2.8e-46, Sum P(2) = 2.8e-46
Identities = 52/157 (33%), Positives = 87/157 (55%)
Query: 78 FFHPSPSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKRQGFDRP 136
F+ +L+ +V+ + + + ++G P PI EF FP+ + +K G++ P
Sbjct: 173 FYKDHSFILSLQDEQVENLKLQLGIAIQGQQVPRPIIEFEHCGFPETLNSNLKNSGYEVP 232
Query: 137 TPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTR 196
TPIQ Q P+ + G ++V A TGSGKT A++LP I+ + ++++ P L+LAPTR
Sbjct: 233 TPIQMQMIPVGLLGRDIVASADTGSGKTAAFLLPVIMKVLNETET-----PSALILAPTR 287
Query: 197 ELAQQIQEVARDFGSST-YLRSTCVYGGASKGPQPDR 232
ELA QI+ A++ + +R+ + GG PQ R
Sbjct: 288 ELAIQIERQAKELMAGLPNMRTVLLVGGLPLPPQLHR 324
>WB|WBGene00001600 [details] [associations]
symbol:glh-3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0043186 "P granule" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008432 "JUN kinase
binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA helicase
binding" evidence=IPI] [GO:0043621 "protein self-association"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 314 (115.6 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 80/211 (37%), Positives = 116/211 (54%)
Query: 228 PQPD-RQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKE 285
P+ D RQ +M+SAT+P VQ+ A L + Y I I + +AN + Q E+C K
Sbjct: 481 PKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG-AANKCVIQEFELCDRTSKV 539
Query: 286 NKLFGLLN-DISS--KDEN------KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQ 336
+KL LL DI + ++N KTI+F ++ D + + A+ IHG + Q
Sbjct: 540 DKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQ 599
Query: 337 QERDYVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDN 396
+ER LK FR+G +L+AT V RGLD+ V VIN+D PNN +DYIHRIGRTGR N
Sbjct: 600 KERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGN 659
Query: 397 TGTSYTFFTQQNSRQA-KDLIDVLTESNHPV 426
+G + +F + + Q L+ L ++ V
Sbjct: 660 SGRATSFISLADDVQILPQLVRTLADAEQVV 690
Score = 201 (75.8 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 44/121 (36%), Positives = 67/121 (55%)
Query: 111 PITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
P F++++ P + + V+R G+ R TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 171 AIVHINHQSQLKPG-DG---PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASK 226
+ + + L G +G P ++L PTRELA QI R F + + VYGG +
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 227 G 227
G
Sbjct: 416 G 416
>UNIPROTKB|O01836 [details] [associations]
symbol:glh-3 "ATP-dependent RNA helicase glh-3"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 SUPFAM:SSF57756
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
EMBL:FO080197 GeneTree:ENSGT00620000087942 EMBL:AF079509 PIR:T15231
RefSeq:NP_491681.1 UniGene:Cel.19392 ProteinModelPortal:O01836
SMR:O01836 IntAct:O01836 STRING:O01836 PaxDb:O01836
EnsemblMetazoa:B0414.6.1 EnsemblMetazoa:B0414.6.2 GeneID:172245
KEGG:cel:CELE_B0414.6 UCSC:B0414.6 CTD:172245 WormBase:B0414.6
InParanoid:O01836 NextBio:874651 Uniprot:O01836
Length = 720
Score = 314 (115.6 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 80/211 (37%), Positives = 116/211 (54%)
Query: 228 PQPD-RQVLMWSATWPREVQKLAEDFL-DSYIQINIGSLTLSANHNIQQVVEVCAEHEKE 285
P+ D RQ +M+SAT+P VQ+ A L + Y I I + +AN + Q E+C K
Sbjct: 481 PKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG-AANKCVIQEFELCDRTSKV 539
Query: 286 NKLFGLLN-DISS--KDEN------KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQ 336
+KL LL DI + ++N KTI+F ++ D + + A+ IHG + Q
Sbjct: 540 DKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQ 599
Query: 337 QERDYVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDN 396
+ER LK FR+G +L+AT V RGLD+ V VIN+D PNN +DYIHRIGRTGR N
Sbjct: 600 KERSAALKLFRSGAKPVLIATAVVERGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGN 659
Query: 397 TGTSYTFFTQQNSRQA-KDLIDVLTESNHPV 426
+G + +F + + Q L+ L ++ V
Sbjct: 660 SGRATSFISLADDVQILPQLVRTLADAEQVV 690
Score = 201 (75.8 bits), Expect = 9.3e-46, Sum P(2) = 9.3e-46
Identities = 44/121 (36%), Positives = 67/121 (55%)
Query: 111 PITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
P F++++ P + + V+R G+ R TPIQ P+ G +++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 171 AIVHINHQSQLKPG-DG---PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASK 226
+ + + L G +G P ++L PTRELA QI R F + + VYGG +
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
Query: 227 G 227
G
Sbjct: 416 G 416
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 314 (115.6 bits), Expect = 3.9e-45, Sum P(2) = 3.9e-45
Identities = 71/180 (39%), Positives = 102/180 (56%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
+RQ L++SAT+P ++Q+LA+ F +I + +A Q VV++ K +
Sbjct: 180 NRQTLLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAETISQFVVKLPTNDGKARRT-A 238
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L I + + I+F K +VD + S+ +G A IHGD Q R L+ FR+G+
Sbjct: 239 LRRVIEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGK 298
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVA+DVAARGLD+ DV V NF P EDY+HRIGRTGR+ TG SYT T + +
Sbjct: 299 LKLLVASDVAARGLDIPDVGHVFNFGPPPKDEDYVHRIGRTGRAGRTGESYTVVTPADDK 358
Score = 187 (70.9 bits), Expect = 3.9e-45, Sum P(2) = 3.9e-45
Identities = 43/114 (37%), Positives = 64/114 (56%)
Query: 113 TEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAI 172
T FA+ + +LK V G+ PTPIQ + P + G ++ GVAQTG+GKT A++LP I
Sbjct: 4 TTFADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMI 63
Query: 173 VHINH-QSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
++ +++ + P L+L PTRELA Q+ E +G L + GG S
Sbjct: 64 QRLSTGRARARM---PRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVS 114
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 449 (163.1 bits), Expect = 5.6e-45, Sum P(2) = 5.6e-45
Identities = 90/196 (45%), Positives = 129/196 (65%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
DRQ LM+SAT+PR++Q LA DFL Y+ +++G + S + NI Q + + EK++ +
Sbjct: 378 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVG-STSENITQKILYVEDDEKKSVILD 436
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL S+ + TI+F ETKR D + + + G+ A IHGD+SQ ER+ L F+NG
Sbjct: 437 LL---SANENGLTIVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGA 493
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
A ILVAT VAARGLD+ +V VIN+D P++ +DY+HRIGRTGR+ N G + FF + N
Sbjct: 494 APILVATAVAARGLDIPNVSHVINYDLPSDIDDYVHRIGRTGRAGNVGIATAFFNRNNKN 553
Query: 411 QAKDLIDVLTESNHPV 426
K LI++L+E+N V
Sbjct: 554 VVKGLIELLSEANQEV 569
Score = 214 (80.4 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 74/297 (24%), Positives = 141/297 (47%)
Query: 109 PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYM 168
P PIT F + +++ ++ F +PTP+Q PI +G +++ AQTGSGKT ++
Sbjct: 182 PEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFL 241
Query: 169 LPAIV--HINHQSQLKPGDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLRST 218
P + ++ + + +G P +LV+APTREL QI E ++ F +++R+
Sbjct: 242 FPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSYRSWVRAC 301
Query: 219 CVYGGASKGPQP---DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQV 275
VYGGA G Q DR + AT P ++ D LD ++++ ++ ++
Sbjct: 302 VVYGGADIGQQMRNMDRGCDLLVAT-PGRLK----DLLDRG-KVSLANIRYLVLDEADRM 355
Query: 276 VEVCAEHEKENKLFGLLNDISSKDENKTIIFAET-KRKVDKITKS-IQNYGWAAVGIHGD 333
+++ E + + D+ + + +T++F+ T R + + + +++Y + +VG G
Sbjct: 356 LDM--GFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGS 413
Query: 334 KSQQERDYVLK-EFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIG 389
S+ +L E ++ IL GL + F +N DY++ G
Sbjct: 414 TSENITQKILYVEDDEKKSVILDLLSANENGLTI---VFTETKRMADNLADYLYDQG 467
Score = 46 (21.3 bits), Expect = 5.6e-45, Sum P(2) = 5.6e-45
Identities = 17/61 (27%), Positives = 26/61 (42%)
Query: 81 PSPSV--LNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTP 138
P+P V HE +K ++ L G A + + + NF +Y V+ G P P
Sbjct: 125 PTPGVGKWQDGKHEPAPRNEKLEVELFGTADDSHFQSSGINFDNYDDIPVEASGDKVPEP 184
Query: 139 I 139
I
Sbjct: 185 I 185
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 293 (108.2 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 62/186 (33%), Positives = 106/186 (56%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q ++ SAT P +++LA L + ++I G L + +++Q++ E K+ KLF
Sbjct: 378 DSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCS-SVRQIILWVEEPAKKKKLFE 436
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D +++++Q G +V IH +KSQ ER +LK G
Sbjct: 437 ILND-KKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNILKGLLEG 495
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
++V+T V RGLD+ V+ V+NFD P++ ++Y+H++GR GR GT+ TF +
Sbjct: 496 DYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFINNNSK 555
Query: 410 RQAKDL 415
R D+
Sbjct: 556 RLFWDI 561
Score = 208 (78.3 bits), Expect = 1.6e-44, Sum P(2) = 1.6e-44
Identities = 48/149 (32%), Positives = 81/149 (54%)
Query: 83 PSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQA 141
P +LN +++ + + + ++G + PI +F FP+ + +K G++ PTPIQ
Sbjct: 173 PFILNLQEDQIENLKRQLGIVVQGQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQM 232
Query: 142 QGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQ 201
Q P+ + G +++ A TGSGKT A++LP I +S+ P L+L PTRELA Q
Sbjct: 233 QMIPVGLLGRDVLASADTGSGKTAAFLLPVITRALCESKT-----PSALILTPTRELAIQ 287
Query: 202 IQEVARDFGSST-YLRSTCVYGGASKGPQ 229
I+ A++ S +++ + GG PQ
Sbjct: 288 IENQAKELMSGLPRMKTVLLVGGLPLPPQ 316
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 448 (162.8 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 91/196 (46%), Positives = 132/196 (67%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
DRQ LM+SAT+PR++Q LA DFL Y+ +++G + S + NI Q VE +H+K + L
Sbjct: 380 DRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVG-STSENITQKVEYVEDHDKRSVLLD 438
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+L+ + T+IF ETKR D +++ + N + A IHGD++Q+ER+ L+ FR+GR
Sbjct: 439 ILHTHGTT--GLTLIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGR 496
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
ILVAT VAARGLD+ +V VIN+D P + +DY+HRIGRTGR+ NTG + FF + N
Sbjct: 497 YPILVATAVAARGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGIATAFFNRGNRG 556
Query: 411 QAKDLIDVLTESNHPV 426
+DLID+L E++ V
Sbjct: 557 VVRDLIDLLKEAHQEV 572
Score = 209 (78.6 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 72/256 (28%), Positives = 122/256 (47%)
Query: 107 NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLA 166
+ P P+ F D+++ + + PTP+Q PI M+G +++ AQTGSGKT
Sbjct: 180 DVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGG 239
Query: 167 YMLPAIVHINHQSQLKP-----GD-G------PIVLVLAPTRELAQQIQEVARDFGSSTY 214
++ P + P G G P L+LAPTREL QI + AR F ++
Sbjct: 240 FLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARKFAYRSW 299
Query: 215 LRSTCVYGGASKGPQP---DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHN 271
+R VYGGA G Q +R + AT P + L E S + NI L L
Sbjct: 300 VRPCVVYGGADIGSQLRQIERGCDLLVAT-PGRLVDLIERGRISLV--NIKYLILD---E 353
Query: 272 IQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAET-KRKVDKITKS-IQNYGWAAVG 329
+++++ E + + G D+ + ++ +T++F+ T R + + + +++Y + +VG
Sbjct: 354 ADRMLDMGFEPQIRRIVEG--EDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVG 411
Query: 330 IHGDKSQ---QERDYV 342
G S+ Q+ +YV
Sbjct: 412 RVGSTSENITQKVEYV 427
Score = 41 (19.5 bits), Expect = 2.2e-44, Sum P(2) = 2.2e-44
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 109 PN-PITEFAEANFPDYVLKEVKRQGFDRPTPI 139
PN P + NF +Y V+ G D P P+
Sbjct: 154 PNDPTKQNTGINFANYDDIPVEASGHDVPEPV 185
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 288 (106.4 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 62/186 (33%), Positives = 105/186 (56%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q ++ SAT P +++LA L + ++I G L N++Q++ + K+ KLF
Sbjct: 377 DCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCA-NVRQIILWVEDPAKKKKLFE 435
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D +++++Q G ++ IH +KSQ ER +LK G
Sbjct: 436 ILND-KKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEG 494
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
++V+T V RGLD+ V+ V+NFD P++ ++Y+H+IGR GR GT+ TF +
Sbjct: 495 DYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSK 554
Query: 410 RQAKDL 415
R D+
Sbjct: 555 RLFWDI 560
Score = 211 (79.3 bits), Expect = 2.7e-44, Sum P(2) = 2.7e-44
Identities = 48/160 (30%), Positives = 86/160 (53%)
Query: 73 PFEKNFFHPS-PSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKR 130
P ++ + P +LN +++ + + + ++G PI +F + P+ + +K+
Sbjct: 161 PLNASYVYKEHPFILNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCSLPEVLNHNLKK 220
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVL 190
G++ PTPIQ Q P+ + G +++ A TGSGKT A++LP I+ +S+ P L
Sbjct: 221 SGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKT-----PSAL 275
Query: 191 VLAPTRELAQQIQEVARDFGSST-YLRSTCVYGGASKGPQ 229
+L PTRELA QI+ A++ S +++ + GG PQ
Sbjct: 276 ILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQ 315
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 283 (104.7 bits), Expect = 3.2e-44, Sum P(2) = 3.2e-44
Identities = 64/186 (34%), Positives = 102/186 (54%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q ++ SAT P V++LA L + I G L +++Q+V E K+ KLF
Sbjct: 378 DCQTVLASATIPASVEQLACQLLRDPVAITAGERNLPCP-SVRQIVLWVEEPAKKKKLFE 436
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D +++++Q G + +H DK+Q ER +LK G
Sbjct: 437 ILND-KKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSTSVHSDKTQMERKNILKGLLEG 495
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
++V+T V RGLD+ VK V+NFD P++ ++Y+H+IGR GR GT+ TF +
Sbjct: 496 DYDVVVSTGVLGRGLDLVGVKLVVNFDMPSSMDEYVHQIGRVGRLGQHGTAITFINNNSK 555
Query: 410 RQAKDL 415
R D+
Sbjct: 556 RLFWDI 561
Score = 227 (85.0 bits), Expect = 3.2e-44, Sum P(2) = 3.2e-44
Identities = 53/143 (37%), Positives = 81/143 (56%)
Query: 92 EVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSG 150
+++ R + +T++G P PI +F FP+ + + +K G++ PTPIQ Q P+ + G
Sbjct: 182 QIENLRRQLGITVRGRGVPRPIVDFEHCGFPEALNRNLKASGYEVPTPIQMQMIPVGLLG 241
Query: 151 SNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFG 210
+++ A TGSGKT A++LP I+ QS+ G LVL PTRELA QI+ A++
Sbjct: 242 RDVLASADTGSGKTAAFLLPVILRALSQSKSPSG-----LVLTPTRELAIQIERQAKELM 296
Query: 211 SST-YLRSTCVYGGASKGPQPDR 232
S LR+ + GG PQ R
Sbjct: 297 SGLPCLRTALLVGGLPAPPQRHR 319
>TIGR_CMR|SO_4034 [details] [associations]
symbol:SO_4034 "ATP-dependent RNA helicase DeaD"
species:211586 "Shewanella oneidensis MR-1" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0009631 "cold
acclimation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:LPQGMPK RefSeq:NP_719564.1
ProteinModelPortal:Q8EA75 GeneID:1171660 KEGG:son:SO_4034
PATRIC:23527732 ProtClustDB:CLSK907463 Uniprot:Q8EA75
Length = 623
Score = 326 (119.8 bits), Expect = 4.5e-44, Sum P(2) = 4.5e-44
Identities = 69/199 (34%), Positives = 121/199 (60%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P RQ+ ++SAT P +++++A L + I+I + + + Q+ V+V ++H NKL
Sbjct: 178 PQRQLALFSATMPEQIKRVANKHLKNATNISIAASHTTVDSIEQRFVQV-SQH---NKLE 233
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L+ + ++ IIF T+ ++ + ++ G+A+ +HGD +QQ R+ +++ +NG
Sbjct: 234 ALVRVLEVENTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAVEQLKNG 293
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ IL+ATDVAARGLDV+ + V+N+D P ++E Y+HRIGRTGR+ TG + F T S
Sbjct: 294 KLDILIATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVT---S 350
Query: 410 RQAKDLIDVLTESNHPVDP 428
R+ + L + +N + P
Sbjct: 351 REMRMLRTIERATNSRISP 369
Score = 169 (64.5 bits), Expect = 4.5e-44, Sum P(2) = 4.5e-44
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F E + +L+ + G+++PTPIQ+ M+G +++G AQTG+GKT A+ LP +
Sbjct: 8 FRELGLSENLLRALDELGYEKPTPIQSASIDPLMAGKDILGQAQTGTGKTGAFALPLLNK 67
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGS-STYLRSTCVYGGASKGPQ 229
+ Q+ P +LVLAPTRELA Q+ E + +YGG S Q
Sbjct: 68 VTSQTT------PQILVLAPTRELAVQVAEAFSSYAKFMKNFHVLPIYGGQSMQQQ 117
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 439 (159.6 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 116/332 (34%), Positives = 175/332 (52%)
Query: 106 GNAPNPITE---FAEANFPDYVL----KEVKRQGFDRPTPIQAQGWPIA--MSGSNMVG- 155
G +P P ++ + +P V+ +E+ Q FD + W A + G + +G
Sbjct: 208 GPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGN 267
Query: 156 -VAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTY 214
+ + G L P +N L+ G + LA + L + D G
Sbjct: 268 QLREIERGCDLLVATPG--RLN--DLLERGK----ISLANVKYLVLDEADRMLDMGFEPQ 319
Query: 215 LRSTCVYGGASKGPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQ 274
+R + P +RQ LM+SAT+P ++Q LA DFL YI +++G + S + NI Q
Sbjct: 320 IRH--IVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVG-STSENITQ 376
Query: 275 VVEVCAEHEKENKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDK 334
V +K++ L LL S+ + T+IF ETKR D++T + + A IHGD+
Sbjct: 377 KVLYVENQDKKSALLDLL---SASTDGLTLIFVETKRMADQLTDFLIMQNFRATAIHGDR 433
Query: 335 SQQERDYVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRS 394
+Q ER+ L FR+G A +LVAT VAARGLD+ +V VIN+D P++ +DY+HRIGRTGR+
Sbjct: 434 TQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRA 493
Query: 395 DNTGTSYTFFTQQNSRQAKDLIDVLTESNHPV 426
NTG + FF +NS K L ++LTE+N V
Sbjct: 494 GNTGLATAFFNSENSNIVKGLHEILTEANQEV 525
Score = 200 (75.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 75/275 (27%), Positives = 126/275 (45%)
Query: 107 NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLA 166
+ P PITEF +L+ +K F +PTP+Q PI +G +++ AQTGSGKT
Sbjct: 136 DVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGG 195
Query: 167 YMLPAIVHI--NHQSQLKPGDG--------PIVLVLAPTRELAQQIQEVARDFGSSTYLR 216
++ P + S G P +++APTRELA QI + A+ F ++++
Sbjct: 196 FLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVK 255
Query: 217 STCVYGGASKGPQP---DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLS-ANHNI 272
+ VYGG+ G Q +R + AT P + L E S N+ L L A+ +
Sbjct: 256 ACVVYGGSPIGNQLREIERGCDLLVAT-PGRLNDLLERGKISLA--NVKYLVLDEADRML 312
Query: 273 QQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAET-KRKVDKITKS-IQNYGWAAVGI 330
E H E+ D++ E +T++F+ T + + + + +Y + +VG
Sbjct: 313 DMGFEPQIRHIVEDC------DMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGR 366
Query: 331 HGDKSQQERDYVLK-EFRNGRAGILVATDVAARGL 364
G S+ VL E ++ ++ +L + GL
Sbjct: 367 VGSTSENITQKVLYVENQDKKSALLDLLSASTDGL 401
Score = 42 (19.8 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 98 DKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPI 139
+K ++ + G +P + + NF +Y V G D P PI
Sbjct: 100 EKAEIAIFGVPEDPNFQSSGINFDNYDDIPVDASGKDVPEPI 141
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 319 (117.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 71/194 (36%), Positives = 118/194 (60%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT + +++ L +I + +A Q+V + ++ + E F +
Sbjct: 181 RQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTE---F-V 236
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+ + SK+ + +IF+ TK+ VDK+T + G A HGD SQ R+ VL+EF+ G
Sbjct: 237 SHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLV 296
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVAARGLD+ ++++VINF+ P +EDYIHRIGRTGR+ + G + T F+Q+++
Sbjct: 297 QVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALL 356
Query: 412 AKDLIDVLTESNHP 425
++ ++ L + P
Sbjct: 357 LEE-VETLLDKRLP 369
Score = 158 (60.7 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPI-VL 190
G+ +PTPIQ + P ++ +++ AQTG+GKT A+ LP + + +Q I L
Sbjct: 20 GYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRAL 79
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
VL PTRELA Q+Q+ + T +R YGG S
Sbjct: 80 VLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVS 114
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 319 (117.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 71/194 (36%), Positives = 118/194 (60%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT + +++ L +I + +A Q+V + ++ + E F +
Sbjct: 181 RQTLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTAAQIEQRVYAIDSDRKTE---F-V 236
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
+ + SK+ + +IF+ TK+ VDK+T + G A HGD SQ R+ VL+EF+ G
Sbjct: 237 SHLVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLV 296
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVATDVAARGLD+ ++++VINF+ P +EDYIHRIGRTGR+ + G + T F+Q+++
Sbjct: 297 QVLVATDVAARGLDIAELQYVINFELPFIAEDYIHRIGRTGRAGSAGLAITLFSQEDALL 356
Query: 412 AKDLIDVLTESNHP 425
++ ++ L + P
Sbjct: 357 LEE-VETLLDKRLP 369
Score = 158 (60.7 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 132 GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPI-VL 190
G+ +PTPIQ + P ++ +++ AQTG+GKT A+ LP + + +Q I L
Sbjct: 20 GYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLLMADNQSDHAAKAIRAL 79
Query: 191 VLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
VL PTRELA Q+Q+ + T +R YGG S
Sbjct: 80 VLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVS 114
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 327 (120.2 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 71/188 (37%), Positives = 111/188 (59%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
PQ D QV++ SAT P EV + F+ + I+I + L+ Q + V + K +
Sbjct: 200 PQ-DVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKDELTLEGIRQFYINVQKDEWKFDC 258
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L L N ++ + +IF T+RKVD +T+ + + +HGD Q ERD +++EFR
Sbjct: 259 LCDLYNVVNV---TQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFR 315
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G + +L+ TD+ ARG+DV V VIN+D P+N E+YIHRIGR+GR G + F T+
Sbjct: 316 SGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTEN 375
Query: 408 NSRQAKDL 415
++RQ K++
Sbjct: 376 DARQLKEI 383
Score = 149 (57.5 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++GN + F + + +L+ + GF++P+ IQ + +G +++ AQ+G+GK
Sbjct: 20 IEGNYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGK 79
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPI-VLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYG 222
T + + + I+H+ D + LV+APTRELAQQIQ+V G + G
Sbjct: 80 TATFSVSILQRIDHE------DPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133
Query: 223 GAS 225
G S
Sbjct: 134 GTS 136
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 92/198 (46%), Positives = 134/198 (67%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLT-LSANHNIQQVVEVCAEHEKENKLFG 290
RQ LM++ATWP+EV++LA F+++ I+++IG+ L+AN I Q+VEV KE KL
Sbjct: 288 RQTLMFTATWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLE 347
Query: 291 LLNDISS--KDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
LL S K K +IFA K++ ++ ++++ G+ IHGD SQQ+R L EF++
Sbjct: 348 LLKKYHSGPKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKS 407
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G++ +L+ATDVAARGLD+ +VK VIN +P EDY+HRIGRTGR+ TGT++T FT+Q
Sbjct: 408 GKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQE 467
Query: 409 SRQAKDLIDVLTESNHPV 426
A L++VL +N PV
Sbjct: 468 KHLAGGLVNVLNGANQPV 485
Score = 224 (83.9 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 69/250 (27%), Positives = 123/250 (49%)
Query: 78 FFHPSPSVLNRSPHEVQAFRDKHQMTLKGN---APNPITEFAEANFPDYVLKEVKRQGFD 134
F+ S ++ + ++ + ++++ ++ + A P+ F + + E+ + F
Sbjct: 76 FYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLALRPLLSFDYLSLDSSIQAEISK--FP 133
Query: 135 RPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAP 194
+PTPIQA WP +SG ++VGVA+TGSGKT A+ +PAI H+ + + + G VLV++P
Sbjct: 134 KPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQKKR---GIQVLVISP 190
Query: 195 TRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDRQVLMWSATWPREVQKLAEDFLD 254
TRELA QI + ++ CVYGG K Q R L S +L D L
Sbjct: 191 TRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQ--RIQLKKSQVVVATPGRLL-DLLQ 247
Query: 255 SYIQINIGSLTLS-ANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAET-KRK 312
GS+ LS N+ + + E E + ++ + + + +T++F T ++
Sbjct: 248 E------GSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDAS-KRQTLMFTATWPKE 300
Query: 313 VDKITKSIQN 322
V ++ + N
Sbjct: 301 VRELASTFMN 310
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 275 (101.9 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 56/139 (40%), Positives = 86/139 (61%)
Query: 96 FRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
FR+ + +T KG PNPI + +++ P ++L+ + + G+ PTPIQ Q PI + +++
Sbjct: 373 FREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 432
Query: 155 GVAQTGSGKTLAYMLPAIVHINHQ---SQLKPGD-GPIVLVLAPTRELAQQIQEVARDFG 210
GVA+TGSGKT A+++P +V I +++ D GP ++LAPTRELAQQI+E FG
Sbjct: 433 GVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFG 492
Query: 211 SSTYLRSTCVYGGASKGPQ 229
+R V GG S+ Q
Sbjct: 493 KPLGIRPVAVIGGISREDQ 511
Score = 242 (90.2 bits), Expect = 2.6e-43, Sum P(2) = 2.6e-43
Identities = 47/102 (46%), Positives = 65/102 (63%)
Query: 321 QNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNN 380
Q Y A +HG K Q++R++ L + G ILVATDVA RG+D+ DV V+N+D N
Sbjct: 668 QQYN--ACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKN 725
Query: 381 SEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQAKDLIDVLTES 422
EDYIHRIGRTGR+ +G + TF T+++S +L + ES
Sbjct: 726 IEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILES 767
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 296 (109.3 bits), Expect = 3.6e-43, Sum P(3) = 3.6e-43
Identities = 70/189 (37%), Positives = 107/189 (56%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
Q LM+SAT+ V+ LA L S I++ ++ I+Q V E K L L
Sbjct: 198 QTLMFSATFSDRVKSLANQLLKSPKTISVSKENTTSG-KIKQAVYWVTEERKRELLSEL- 255
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
I + + ++FA TK + + K ++ G A HGDK+Q R+ L++F G+
Sbjct: 256 --IGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVR 313
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+LVATDVAARGLD+ D+ FV+NF P EDY+HR+GRTGR+ +GT+ + + ++ R
Sbjct: 314 VLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVGRTGRAGKSGTAISLVSPKDERFL 373
Query: 413 KDLIDVLTE 421
++ I+ L E
Sbjct: 374 EN-IEQLIE 381
Score = 113 (44.8 bits), Expect = 3.6e-43, Sum P(3) = 3.6e-43
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 124 VLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP---AIVHINHQSQ 180
+LK VK G+ TPIQ + P+ G +++ AQTG+GKT A+ LP AI NH ++
Sbjct: 12 LLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTGKTAAFSLPILDAIAKANHAAK 71
Score = 80 (33.2 bits), Expect = 3.6e-43, Sum P(3) = 3.6e-43
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 177 HQSQLKPGDGPIV--LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ ++ K G + L+L PTRELA Q+ + + F ++S VYGG Q
Sbjct: 80 NSAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVVYGGGKMASQ 134
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 280 (103.6 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 65/182 (35%), Positives = 100/182 (54%)
Query: 232 RQVLMWSATWPREVQKLAEDFL--DSYIQIN-IGSLTLSANHNIQQVVEVCAEHEKENKL 288
R +M++AT V+KL + +L Y+ I G + + + + + E K NKL
Sbjct: 369 RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKL 428
Query: 289 FGLLNDISSKDENKTII-FAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
++ EN II FA K D +++ + + V IHG KSQ R+ + FR
Sbjct: 429 IKIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
N + +L+ATDVAARG+D+ +V VIN+ ++YIHRIGRTGR+ N G S+TF + Q
Sbjct: 489 NHESEVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQ 548
Query: 408 NS 409
++
Sbjct: 549 DT 550
Score = 220 (82.5 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 48/134 (35%), Positives = 79/134 (58%)
Query: 96 FRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
F++ + +T KG N PNP+ + E + D ++ + + G++ PT +Q P+A+ ++V
Sbjct: 150 FKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVV 209
Query: 155 GVAQTGSGKTLAYMLPAIVHI-----NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDF 209
GVA+TGSGKTLA+++P + +I N+ K + P+ L+LAPTRELA QI + A F
Sbjct: 210 GVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKF 269
Query: 210 GSSTYLRSTCVYGG 223
+ + GG
Sbjct: 270 CKKLGYQVLPIIGG 283
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 280 (103.6 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 65/182 (35%), Positives = 100/182 (54%)
Query: 232 RQVLMWSATWPREVQKLAEDFL--DSYIQIN-IGSLTLSANHNIQQVVEVCAEHEKENKL 288
R +M++AT V+KL + +L Y+ I G + + + + + E K NKL
Sbjct: 369 RSTMMFTATISPTVEKLTKKYLIDPGYLYIGGAGEALDNISQSFEFLSSATTEATKFNKL 428
Query: 289 FGLLNDISSKDENKTII-FAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
++ EN II FA K D +++ + + V IHG KSQ R+ + FR
Sbjct: 429 IKIIRSHWRVTENPLIIIFANFKHVCDSLSQELSSNDINNVVIHGSKSQDMREQAITNFR 488
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
N + +L+ATDVAARG+D+ +V VIN+ ++YIHRIGRTGR+ N G S+TF + Q
Sbjct: 489 NHESEVLIATDVAARGIDIPNVTLVINYQMVKKFDEYIHRIGRTGRAGNLGESFTFISDQ 548
Query: 408 NS 409
++
Sbjct: 549 DT 550
Score = 220 (82.5 bits), Expect = 1.0e-42, Sum P(2) = 1.0e-42
Identities = 48/134 (35%), Positives = 79/134 (58%)
Query: 96 FRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMV 154
F++ + +T KG N PNP+ + E + D ++ + + G++ PT +Q P+A+ ++V
Sbjct: 150 FKEDYNITTKGKNIPNPLRYWNEGSINDKLVSIISQLGYEEPTSVQRASIPLALKKRDVV 209
Query: 155 GVAQTGSGKTLAYMLPAIVHI-----NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDF 209
GVA+TGSGKTLA+++P + +I N+ K + P+ L+LAPTRELA QI + A F
Sbjct: 210 GVAETGSGKTLAFLIPVLNYILSIDENYLKYEKISNEPVGLILAPTRELALQITKEAEKF 269
Query: 210 GSSTYLRSTCVYGG 223
+ + GG
Sbjct: 270 CKKLGYQVLPIIGG 283
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 318 (117.0 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 67/185 (36%), Positives = 105/185 (56%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D QV++ SAT P+EV ++ F+ ++I + L+ Q + V E K + L
Sbjct: 206 DTQVILLSATMPQEVLEVTTKFMRDPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCD 265
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L ++ + +IF T+RKVD +T+ + + +HGD Q+ERD ++KEFR+G
Sbjct: 266 LYETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGS 322
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+ +L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+ + R
Sbjct: 323 SRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMITEDDKR 382
Query: 411 QAKDL 415
+D+
Sbjct: 383 TLRDI 387
Score = 150 (57.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 37/116 (31%), Positives = 64/116 (55%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWKEIVDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I+ +LK +VLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 83 TATFAISILQQID--VELKATQA---MVLAPTRELAQQIQKVVLALGD--YMGATC 131
>UNIPROTKB|Q81QF0 [details] [associations]
symbol:BAS2301 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 307 (113.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 64/185 (34%), Positives = 110/185 (59%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
+Q +++SAT P++++KLA+ ++D I + S ++ + Q+V+E + K + L
Sbjct: 180 KQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIET-TDRAKPDAL--- 235
Query: 292 LNDISSKDEN-KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+ +D+ +IF TK + K+ +++ G+ +HGD Q +R+ V+K FR +
Sbjct: 236 -RFVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAK 294
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
L+ATDVAARGLDVD V V N+D P + E YIHRIGRTGR+ +G + TF ++ +
Sbjct: 295 IQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEK 354
Query: 411 QAKDL 415
+++
Sbjct: 355 HLEEI 359
Score = 158 (60.7 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+ F E + ++ G TPIQ + P+ +SG +++G A+TG+GKTLA++LP
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQ-EVARDFGSSTYLRSTCVYGGASKGPQ 229
+ I+ +S D L++APTRELA QI E+ + + +YGG Q
Sbjct: 64 LEKIDPESS----DVQ-ALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQ 117
>TIGR_CMR|BA_2475 [details] [associations]
symbol:BA_2475 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_844851.1
RefSeq:YP_019115.1 RefSeq:YP_028562.1 ProteinModelPortal:Q81QF0
DNASU:1085525 EnsemblBacteria:EBBACT00000011128
EnsemblBacteria:EBBACT00000014583 EnsemblBacteria:EBBACT00000019769
GeneID:1085525 GeneID:2816610 GeneID:2853183 KEGG:ban:BA_2475
KEGG:bar:GBAA_2475 KEGG:bat:BAS2301 OMA:DNKGRPG
ProtClustDB:CLSK916648 BioCyc:BANT260799:GJAJ-2367-MONOMER
BioCyc:BANT261594:GJ7F-2455-MONOMER Uniprot:Q81QF0
Length = 450
Score = 307 (113.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 64/185 (34%), Positives = 110/185 (59%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
+Q +++SAT P++++KLA+ ++D I + S ++ + Q+V+E + K + L
Sbjct: 180 KQTMLFSATIPKDIKKLAKRYMDEPQMIQVQSEEVTVDTIEQRVIET-TDRAKPDAL--- 235
Query: 292 LNDISSKDEN-KTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+ +D+ +IF TK + K+ +++ G+ +HGD Q +R+ V+K FR +
Sbjct: 236 -RFVMDRDQPFLAVIFCRTKVRASKLYDNLKGLGYNCAELHGDIPQAKRERVMKSFREAK 294
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
L+ATDVAARGLDVD V V N+D P + E YIHRIGRTGR+ +G + TF ++ +
Sbjct: 295 IQYLIATDVAARGLDVDGVTHVFNYDIPEDVESYIHRIGRTGRAGGSGLAITFVAAKDEK 354
Query: 411 QAKDL 415
+++
Sbjct: 355 HLEEI 359
Score = 158 (60.7 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 39/119 (32%), Positives = 62/119 (52%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
+ F E + ++ G TPIQ + P+ +SG +++G A+TG+GKTLA++LP
Sbjct: 4 LKNFLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPI 63
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQ-EVARDFGSSTYLRSTCVYGGASKGPQ 229
+ I+ +S D L++APTRELA QI E+ + + +YGG Q
Sbjct: 64 LEKIDPESS----DVQ-ALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQ 117
>FB|FBgn0029880 [details] [associations]
symbol:CG14443 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:AE014298 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:NP_572330.2 ProteinModelPortal:Q9W3Y5 SMR:Q9W3Y5
IntAct:Q9W3Y5 MINT:MINT-1614529 PRIDE:Q9W3Y5 GeneID:31595
KEGG:dme:Dmel_CG14443 UCSC:CG14443-RA FlyBase:FBgn0029880
OrthoDB:EOG4DFN5J PhylomeDB:Q9W3Y5 GenomeRNAi:31595 NextBio:774378
Bgee:Q9W3Y5 GermOnline:CG14443 Uniprot:Q9W3Y5
Length = 438
Score = 257 (95.5 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 61/206 (29%), Positives = 108/206 (52%)
Query: 229 QPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLT-LSAN-HNIQQVVEVCAEHEKEN 286
+P Q+++ S +W ++++A FL Y I +G + + NI+Q VEV K
Sbjct: 206 RPHAQLIVSSTSWSSNLKRMANKFLGQYTAIRVGEINNIGVRLQNIRQRVEVVNGLSKVE 265
Query: 287 KLFGLLNDI--SSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLK 344
+L L I +S K +I+ + ++ V+++ I+N GIHG ++ QE ++
Sbjct: 266 RLMKELTAIYDTSDIPGKVVIYVKRQKVVEELVDLIRNCV-PCEGIHGGRTAQENQGIIH 324
Query: 345 EFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTG-RSDNTGTSY-T 402
+F G I+VAT + + LDV +++VIN+D+P+N + Y+ R+ RTG S N +
Sbjct: 325 DFGTGAYNIIVATQMTSNCLDVPGIRYVINYDFPDNIDKYVQRMSRTGCLSYNRNCEVIS 384
Query: 403 FFTQQNSRQAKDLIDVLTESNHPVDP 428
FFT N + +++D L + P
Sbjct: 385 FFTMANYKLVTEVVDFLKICKQEIGP 410
Score = 246 (91.7 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 54/149 (36%), Positives = 85/149 (57%)
Query: 96 FRDKHQMTLKG----NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGS 151
+R +H +TL N P P+ F + F +L++++ QG+D PTPIQAQ W IA G
Sbjct: 11 YRKRHNITLTSWNMRNLPEPVLSFERSGFNATILQQLEDQGYDGPTPIQAQTWSIAKEGK 70
Query: 152 NMVGVAQTGSGKTLAYMLPAIVHINHQSQL-KPGDGPIVLVLAPTRELAQQIQEVARDFG 210
N+V ++ G+GKTL Y+LP I+ +++Q L + GPIVL+L RE A +Q +
Sbjct: 71 NIVMISGKGTGKTLGYLLPGIMKMHNQRGLMQHKKGPIVLILVDCREAAVMVQREVLYYT 130
Query: 211 SSTYLRSTCVYGGASKGPQPDRQVLMWSA 239
+ LR+ C+ G + + +L+ SA
Sbjct: 131 NPLELRTHCLLGNSQWQGHAECDLLVASA 159
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 285 (105.4 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 65/196 (33%), Positives = 113/196 (57%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P RQ L +SAT+ +++ +A + I++ + +A +QQ+V + +++ +L
Sbjct: 185 PLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAE-TVQQMVYP-VDKKRKRELL 242
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L I SK+ + ++F +T++ D + + ++ G AV I+GDKSQ R L +F+ G
Sbjct: 243 SYL--IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG 300
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ L+ATDVAARGLD+ ++ V+N+D P +EDY+HRIGRTGR+ G + + +
Sbjct: 301 KVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQ 360
Query: 410 RQAKDLIDVLTESNHP 425
Q + I+ L + P
Sbjct: 361 PQL-EAIERLLNTRLP 375
Score = 180 (68.4 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 41/113 (36%), Positives = 59/113 (52%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F++ +L + G PTPIQ Q P + G +++ AQTG+GKT A+ LP I
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 175 INHQSQLKPGDGPIV--LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
Q + + + LVL PTRELAQQ+ + + + T L+ VYGG S
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTS 120
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 285 (105.4 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 65/196 (33%), Positives = 113/196 (57%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P RQ L +SAT+ +++ +A + I++ + +A +QQ+V + +++ +L
Sbjct: 185 PLRQTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAE-TVQQMVYP-VDKKRKRELL 242
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L I SK+ + ++F +T++ D + + ++ G AV I+GDKSQ R L +F+ G
Sbjct: 243 SYL--IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG 300
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ L+ATDVAARGLD+ ++ V+N+D P +EDY+HRIGRTGR+ G + + +
Sbjct: 301 KVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGLAVSLLSHDEQ 360
Query: 410 RQAKDLIDVLTESNHP 425
Q + I+ L + P
Sbjct: 361 PQL-EAIERLLNTRLP 375
Score = 180 (68.4 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 41/113 (36%), Positives = 59/113 (52%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F++ +L + G PTPIQ Q P + G +++ AQTG+GKT A+ LP I
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 175 INHQSQLKPGDGPIV--LVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
Q + + + LVL PTRELAQQ+ + + + T L+ VYGG S
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTS 120
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 93/216 (43%), Positives = 139/216 (64%)
Query: 208 DFGSSTYLRSTCVYGGASKGPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLS 267
D G +R + GA +RQ LM+SAT+PR++Q LA DFL Y+ +++G + +
Sbjct: 343 DMGFEPQIRH--IVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGST 400
Query: 268 ANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAA 327
+ + Q+VV V + EK + L +L+ + E T+IF ETKR D +T + N + A
Sbjct: 401 SENITQKVVHV-EDSEKRSYLLDILHTLPP--EGLTLIFVETKRMADTLTDYLLNSNFPA 457
Query: 328 VGIHGDKSQQERDYVLKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHR 387
IHGD++Q+ER+ L+ FR+GR I+VAT VA+RGLD+ +V VIN+D P + +DY+HR
Sbjct: 458 TSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHR 517
Query: 388 IGRTGRSDNTGTSYTFFTQQNSRQAKDLIDVLTESN 423
IGRTGR+ NTG + FF + N AK+LI++L E+N
Sbjct: 518 IGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEAN 553
Score = 231 (86.4 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 72/257 (28%), Positives = 131/257 (50%)
Query: 98 DKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVA 157
D + + G P+ EF ++L+ +K G+ +PTP+Q PI SG +++ A
Sbjct: 154 DDIPVEVSGGDIEPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACA 213
Query: 158 QTGSGKTLAYMLP----------AIVHINHQSQL--KPGDG-PIVLVLAPTRELAQQIQE 204
QTGSGKT ++ P A V ++ + + +P P L+LAPTREL QI E
Sbjct: 214 QTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHE 273
Query: 205 VARDFGSSTYLRSTCVYGGA---SKGPQPDRQVLMWSATWPREVQKLAEDFLDSYIQINI 261
+R F +++R VYGGA ++ Q D+ + SAT R V D +D +I++
Sbjct: 274 ESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLV-----DLIDRG-RISL 327
Query: 262 GSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAET-KRKVDKITKS- 319
++ +++++ E + + + G D++S +E +T++F+ T R + + +
Sbjct: 328 ANIKFLVLDEADRMLDMGFEPQIRHIVEGA--DMTSVEERQTLMFSATFPRDIQLLARDF 385
Query: 320 IQNYGWAAVGIHGDKSQ 336
+++Y + +VG G S+
Sbjct: 386 LKDYVFLSVGRVGSTSE 402
Score = 37 (18.1 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 402 TFFTQQNSRQAKDLIDVLTESNHP 425
T + R A L D L SN P
Sbjct: 433 TLIFVETKRMADTLTDYLLNSNFP 456
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 292 (107.8 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 64/183 (34%), Positives = 105/183 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQIN-IGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
RQ +M+SAT P ++ L + +L++ + ++ +G I + A+ + G
Sbjct: 282 RQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGIT-TYSIIADSYGRASIIG 340
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L +K K I+F +TKR D+++ ++ + +HGD SQ +R+ L FR+G
Sbjct: 341 PLVTEHAKG-GKCIVFTQTKRDADRLSYALAR-SFKCEALHGDISQSQRERTLAGFRDGH 398
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
ILVATDVAARGLDV +V +I+++ PNN+E ++HR GRTGR+ G++ ++Q SR
Sbjct: 399 FNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 458
Query: 411 QAK 413
K
Sbjct: 459 AVK 461
Score = 188 (71.2 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 44/115 (38%), Positives = 69/115 (60%)
Query: 116 AEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI 175
+E ++K + +G ++ PIQ AM G +M+G A+TG+GKTLA+ +P I I
Sbjct: 107 SELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKI 166
Query: 176 -NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ ++ G P+ LVLAPTRELA+Q+++ R+ S+ L + C+YGG G Q
Sbjct: 167 IKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRE--SAPSLDTICLYGGTPIGQQ 219
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 301 (111.0 bits), Expect = 6.6e-42, Sum P(2) = 6.6e-42
Identities = 65/194 (33%), Positives = 110/194 (56%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
+RQ L++SAT+P ++++A+ + + I + + T + Q +V ++ L
Sbjct: 178 ERQTLLFSATYPASIEQIAQSVTRNALMIKVEA-THDTSSIRQYFYKVEGSAARDEALET 236
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL +++F TKR+V + ++ G++ + +HGD Q+ERD L +F N
Sbjct: 237 LL---LHHQPTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKS 293
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS- 409
ILVATDVAARGLDVD++ V N+D + E ++HRIGRTGR+ + G +++FF+ S
Sbjct: 294 ISILVATDVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESY 353
Query: 410 --RQAKDLIDVLTE 421
Q + +D+ E
Sbjct: 354 RVAQIDEYMDIAIE 367
Score = 163 (62.4 bits), Expect = 6.6e-42, Sum P(2) = 6.6e-42
Identities = 41/116 (35%), Positives = 62/116 (53%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
FA N +L ++ GF TPIQAQ P + G +++G +TGSGKT A+ L + +
Sbjct: 6 FAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLSN 65
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTY-LRSTCVYGGASKGPQ 229
+N + + + LVL PTRELA Q+ R G + + ++ + GG GPQ
Sbjct: 66 LNVK-RFRVQ----ALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQ 116
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 312 (114.9 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 209 QVVLLSATMPMDVLEVTKKFMREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 269 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 413 KDL 415
+D+
Sbjct: 386 RDI 388
Score = 148 (57.2 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + LK LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 84 TATFAISILQQL--EIDLKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 132
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 326 (119.8 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 68/186 (36%), Positives = 110/186 (59%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
PD QV++ SAT P +V +++ F+ + I + L+ Q V V E+ K L
Sbjct: 202 PDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLC 261
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L + +S +++IF T+RKVD++T+ + + + +HGD Q++R+ ++K+FR+G
Sbjct: 262 DLYDTLSI---TQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSG 318
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ +L+ TD+ ARG+DV V VIN+D P+N E+YIHRIGR GR G + F T +
Sbjct: 319 SSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDR 378
Query: 410 RQAKDL 415
R KD+
Sbjct: 379 RILKDI 384
Score = 133 (51.9 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 33/111 (29%), Positives = 58/111 (52%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GKT + + +
Sbjct: 32 FDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQ 91
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
I+ + ++ L+LAPTRELA QIQ V G + S GG +
Sbjct: 92 ID--TSIRECQA---LILAPTRELATQIQRVVMALGEYMKVHSHACIGGTN 137
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 301 (111.0 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 64/183 (34%), Positives = 102/183 (55%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P EV + F+ ++I + L+ Q + V E K + L L
Sbjct: 231 QVVLLSATMPAEVLDVTTKFMREPVRILVKKEELTLEGIRQFYINVEKEEWKLDTLCDLY 290
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q++RD +++EFR+G +
Sbjct: 291 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSR 347
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+ + R
Sbjct: 348 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTL 407
Query: 413 KDL 415
+D+
Sbjct: 408 RDI 410
Score = 158 (60.7 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 83 PSVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQ 142
P R H ++ R + ++ N + F + N + +L+ + GF++P+ IQ +
Sbjct: 25 PKDEKRGKHLRKSPRLQADGVIESNWDEIVDSFDDMNLRETLLRGIYAYGFEKPSAIQQR 84
Query: 143 GWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQI 202
+ G +++ AQ+G+GKT + + + I+ +LK G LVLAPTRELAQQI
Sbjct: 85 AILPCIKGYDVIAQAQSGTGKTATFAISILQQID--IELK---GTQALVLAPTRELAQQI 139
Query: 203 QEVARDFGSSTYLRSTC 219
Q+V G Y+ +TC
Sbjct: 140 QKVILALGD--YMGATC 154
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 299 (110.3 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 70/186 (37%), Positives = 106/186 (56%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFL--DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
PD QV ++SAT P+E+ +L F+ I + LTL I+Q V E E E K
Sbjct: 195 PDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEG---IRQFY-VAVEKE-EWK 249
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L L + + ++II+ T++KVD +T+ + N + +HGD Q++RD +++EFR
Sbjct: 250 LDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFR 309
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G +LV TD+ ARG+DV V VIN+D P + + YIHRIGR+GR G + F T
Sbjct: 310 SGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTND 369
Query: 408 NSRQAK 413
+ + K
Sbjct: 370 DKEKDK 375
Score = 160 (61.4 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 38/116 (32%), Positives = 64/116 (55%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++GN + F + +L+ + GF++P+ IQ +G ++G + +G AQ+G+GK
Sbjct: 14 IEGNTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGK 73
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T +++ ++ IN+ L+LAPTRELAQQIQ+V G YL+ C
Sbjct: 74 TATFVISSLQLINYDYVACQA-----LILAPTRELAQQIQKVVLALGD--YLKVKC 122
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 299 (110.3 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 70/186 (37%), Positives = 106/186 (56%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFL--DSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
PD QV ++SAT P+E+ +L F+ I + LTL I+Q V E E E K
Sbjct: 195 PDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEG---IRQFY-VAVEKE-EWK 249
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L L + + ++II+ T++KVD +T+ + N + +HGD Q++RD +++EFR
Sbjct: 250 LDTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFR 309
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G +LV TD+ ARG+DV V VIN+D P + + YIHRIGR+GR G + F T
Sbjct: 310 SGSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTND 369
Query: 408 NSRQAK 413
+ + K
Sbjct: 370 DKEKDK 375
Score = 160 (61.4 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 38/116 (32%), Positives = 64/116 (55%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++GN + F + +L+ + GF++P+ IQ +G ++G + +G AQ+G+GK
Sbjct: 14 IEGNTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSGTGK 73
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T +++ ++ IN+ L+LAPTRELAQQIQ+V G YL+ C
Sbjct: 74 TATFVISSLQLINYDYVACQA-----LILAPTRELAQQIQKVVLALGD--YLKVKC 122
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 297 (109.6 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 64/184 (34%), Positives = 105/184 (57%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT+ +++ LA L + +I + + Q+V + A H++ L
Sbjct: 185 RQNLLFSATFSKDITDLAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRA--LLAH 242
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
L I++ + ++F TK +++ + + +G +AV IHG+KSQ R L +F+ G
Sbjct: 243 L--ITAGAWEQVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEV 300
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
ILVATD+AARGLD+D + V+NF+ PN EDY+HRIGRTGR+ +G + + +
Sbjct: 301 RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKL 360
Query: 412 AKDL 415
K +
Sbjct: 361 LKSI 364
Score = 177 (67.4 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 39/120 (32%), Positives = 63/120 (52%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
FA + ++ ++ G+ +PTP+Q + P + G +++ AQTG+GKT + LP +
Sbjct: 3 FASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 175 I---NH--QSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ H +SQ P VLVL PTRELA Q+ + + + S C++GG PQ
Sbjct: 63 LFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMNPQ 122
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 300 (110.7 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 68/176 (38%), Positives = 105/176 (59%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
+R ++SAT +V KL L + +++ + S + + +QQ + V ++ K+ L
Sbjct: 293 ERNTYLFSATMTSKVAKLQRASLVNPVKVQVASKYQTVDTLLQQYLFVPFKY-KDCYLAY 351
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+LN+++ N TIIF T KI ++N G+ A+ I+GD Q +R L +F+ G
Sbjct: 352 ILNELAG---NLTIIFTSTCASSTKIAMMLRNLGFGAIPINGDMDQGKRLASLNKFKQGT 408
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
ILVATDVAARGLD+ V VIN+D P NS++Y+HR+GRT R+ N+G + T TQ
Sbjct: 409 KSILVATDVAARGLDIPSVDLVINYDVPTNSKEYVHRVGRTARAGNSGRAITIVTQ 464
Score = 170 (64.9 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 39/100 (39%), Positives = 59/100 (59%)
Query: 124 VLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKP 183
++ + GF++P IQ + P A+ G +++G+AQTGSGKT A+++P + Q L+
Sbjct: 130 IIDACNKLGFNKPKEIQRESIPWALKGRDIIGLAQTGSGKTAAFVIPVL-----QKLLEA 184
Query: 184 GDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
G L LAPTRELA QI + GS+ ++ TCV G
Sbjct: 185 PQGLFCLALAPTRELAYQIADQFNAIGSTIGVK-TCVLVG 223
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 276 (102.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 61/189 (32%), Positives = 105/189 (55%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
PQ D Q ++ SAT P +++LA L +++ G L +++Q+V E K+ K
Sbjct: 363 PQ-DCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKNLPCP-SVRQIVLWVEEPAKKKK 420
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEF 346
LF +LND + ++F + K D ++++++ G + +H +KSQ ER +L+
Sbjct: 421 LFEILND-KKLFKPPVLVFVDCKLGADLLSEAVEKITGLKSTSMHSEKSQIERKTILEGL 479
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
G ++V+T V RGLD+ VK V+NFD P++ ++Y+H++GR GR GT+ TF
Sbjct: 480 LEGDYDVVVSTGVLGRGLDLISVKLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFINN 539
Query: 407 QNSRQAKDL 415
+ R D+
Sbjct: 540 NSKRLFWDI 548
Score = 219 (82.2 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 52/150 (34%), Positives = 80/150 (53%)
Query: 85 VLNRSPHEVQAFRDKHQMTLKGNA-PNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQG 143
+ N +++ R + + ++G P PI +F FP+ + +K G++ PTPIQ Q
Sbjct: 162 ISNLREDQIENLRGQLGIVVEGRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPTPIQMQM 221
Query: 144 WPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQ 203
P+ + G +++ A TGSGKT A++LP I QS+ P LVL PTRELA QI+
Sbjct: 222 IPVGLLGRDLLASADTGSGKTAAFLLPVITRALVQSK-----APSALVLTPTRELAIQIE 276
Query: 204 EVARDF-GSSTYLRSTCVYGGASKGPQPDR 232
A++ G +R+ + GG PQ R
Sbjct: 277 RQAKELMGGLPRMRTALLVGGLPAPPQLHR 306
>TAIR|locus:2008296 [details] [associations]
symbol:AT1G51380 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005730 EMBL:AC024261
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC006085 KO:K13025
EMBL:AY058890 EMBL:AY079046 IPI:IPI00529522 PIR:H96551
RefSeq:NP_175549.1 UniGene:At.11244 ProteinModelPortal:Q9C8J1
SMR:Q9C8J1 PaxDb:Q9C8J1 PRIDE:Q9C8J1 EnsemblPlants:AT1G51380.1
GeneID:841562 KEGG:ath:AT1G51380 GeneFarm:1010 TAIR:At1g51380
InParanoid:Q9C8J1 OMA:DITNITH PhylomeDB:Q9C8J1
ProtClustDB:CLSN2912843 Genevestigator:Q9C8J1 GermOnline:AT1G51380
Uniprot:Q9C8J1
Length = 392
Score = 318 (117.0 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 70/186 (37%), Positives = 110/186 (59%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D QV + SAT P+E+ ++ E F+ ++I + L+ Q V+V +KE F
Sbjct: 195 DIQVCLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDV----DKEEWKFD 250
Query: 291 LLNDISSK-DENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L D+ + N+ IIF T++KVD +T+ +++ + +HGDK Q+ERD ++ +FR+
Sbjct: 251 TLCDLYGRLTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSF 310
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
++ +L+A+DV ARG+DV V VIN+D PNN E YIHRIGR GR G + F +
Sbjct: 311 KSRVLIASDVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDM 370
Query: 410 RQAKDL 415
+ KD+
Sbjct: 371 KDLKDI 376
Score = 140 (54.3 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 39/125 (31%), Positives = 63/125 (50%)
Query: 103 TLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSG 162
T KG PI F + D VL+ V G+ +P+ IQ + + G +++ AQ+G+G
Sbjct: 14 TTKGI--KPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTG 71
Query: 163 KTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYG 222
KT + +N S+ VLVL+P+RELA Q ++ + G+ T +++ G
Sbjct: 72 KTSMIAISVCQIVNISSRKVQ-----VLVLSPSRELASQTEKTIQAIGAHTNIQAHACIG 126
Query: 223 GASKG 227
G S G
Sbjct: 127 GKSIG 131
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 312 (114.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 269 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 413 KDL 415
+D+
Sbjct: 386 RDI 388
Score = 146 (56.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + + K LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 84 TATFAISILQQL--EIEFKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 132
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 312 (114.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 269 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 413 KDL 415
+D+
Sbjct: 386 RDI 388
Score = 146 (56.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + + K LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 84 TATFAISILQQL--EIEFKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 132
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 312 (114.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 269 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 413 KDL 415
+D+
Sbjct: 386 RDI 388
Score = 146 (56.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + + K LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 84 TATFAISILQQL--EIEFKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 132
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 312 (114.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 269 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 413 KDL 415
+D+
Sbjct: 386 RDI 388
Score = 146 (56.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + + K LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 84 TATFAISILQQL--EIEFKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 132
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 312 (114.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 269 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 413 KDL 415
+D+
Sbjct: 386 RDI 388
Score = 146 (56.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + + K LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 84 TATFAISILQQL--EIEFKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 132
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 312 (114.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 209 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 268
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 269 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 325
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 326 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 385
Query: 413 KDL 415
+D+
Sbjct: 386 RDI 388
Score = 146 (56.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 24 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 83
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + + K LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 84 TATFAISILQQL--EIEFKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 132
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 312 (114.9 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 66/183 (36%), Positives = 106/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 210 QVVLLSATMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 269
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 270 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSR 326
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 327 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 386
Query: 413 KDL 415
+D+
Sbjct: 387 RDI 389
Score = 146 (56.5 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 36/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 25 IESNWNEIVDNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGK 84
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + + + + K LVLAPTRELAQQIQ+V G Y+ +TC
Sbjct: 85 TATFAISILQQL--EIEFKETQA---LVLAPTRELAQQIQKVILALGD--YMGATC 133
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 303 (111.7 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 68/189 (35%), Positives = 106/189 (56%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
PQ QV++ SAT P++V ++ F+ ++I + L+ Q + V EKE
Sbjct: 194 PQ-STQVVLLSATMPQDVLEVTTKFMRDPVRILVKKDELTLEGIKQFYIAV----EKEEW 248
Query: 288 LFGLLNDI-SSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
L+D+ + + +IF T+RKVD +T + + +HGD Q +RD ++KEF
Sbjct: 249 KLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEF 308
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
R+G + +L+ATD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T
Sbjct: 309 RSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTA 368
Query: 407 QNSRQAKDL 415
+ R +++
Sbjct: 369 DDVRMMREI 377
Score = 155 (59.6 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 39/132 (29%), Positives = 65/132 (49%)
Query: 94 QAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNM 153
+ D + ++ N + F E N +L+ + GF+RP+ IQ + + G ++
Sbjct: 4 KGLEDVPEGQIESNYDETVDSFDEMNLKSELLRGIYAYGFERPSAIQQRAIMPVIKGHDV 63
Query: 154 VGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSST 213
+ AQ+G+GKT + + + I+ + +K L+LAPTRELAQQIQ+V G
Sbjct: 64 IAQAQSGTGKTATFSISVLQKID--TNVKQCQA---LILAPTRELAQQIQKVVVAIGDFM 118
Query: 214 YLRSTCVYGGAS 225
+ GG S
Sbjct: 119 NIECHACIGGTS 130
>RGD|1359520 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1359520 GO:GO:0005524
GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 283 (104.7 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 59/181 (32%), Positives = 105/181 (58%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q ++ SAT P + +LA+ L + ++I G L + +++Q++ + K+ KLF
Sbjct: 347 DCQTVLVSATIPDSIDQLADQLLHNPVRIVTGDKNLPCS-SVRQIILWVEDPAKKKKLFE 405
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D +++++Q G ++ IH +KSQ ER +LK G
Sbjct: 406 ILND-QKLFKPPVLVFVDCKLGADLLSEAVQKITGLSSTSIHSEKSQVERREILKGLLEG 464
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
++V+T + RGLD+ +VK V+NFD P++ ++Y+H++GR GR GT+ TF +
Sbjct: 465 DYEVVVSTGILGRGLDLVNVKLVVNFDMPSSLDEYVHQVGRVGRLGQNGTAITFINNNSK 524
Query: 410 R 410
R
Sbjct: 525 R 525
Score = 201 (75.8 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 83 PSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKRQGFDRPTPIQA 141
P ++ +++ + + ++++G PI +F FP+ + + +K+ G++ PTPIQ
Sbjct: 172 PFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQM 231
Query: 142 QGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQ 201
Q P+ + G +++ A TGSGKT A++LP I+ L P L+L PTRELA Q
Sbjct: 232 QMIPVGLLGRDILASADTGSGKTAAFLLPVIIRA-----LPEDKTPSALILTPTRELAIQ 286
Query: 202 IQEVARDFGSST-YLRSTCVYGGASKGPQ 229
I+ A++ +++ + GG PQ
Sbjct: 287 IERQAKELMRGLPRMKTVLLVGGLPLPPQ 315
>UNIPROTKB|Q66HG7 [details] [associations]
symbol:Ddx59 "Probable ATP-dependent RNA helicase DDX59"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1359520
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 283 (104.7 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 59/181 (32%), Positives = 105/181 (58%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q ++ SAT P + +LA+ L + ++I G L + +++Q++ + K+ KLF
Sbjct: 347 DCQTVLVSATIPDSIDQLADQLLHNPVRIVTGDKNLPCS-SVRQIILWVEDPAKKKKLFE 405
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D +++++Q G ++ IH +KSQ ER +LK G
Sbjct: 406 ILND-QKLFKPPVLVFVDCKLGADLLSEAVQKITGLSSTSIHSEKSQVERREILKGLLEG 464
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
++V+T + RGLD+ +VK V+NFD P++ ++Y+H++GR GR GT+ TF +
Sbjct: 465 DYEVVVSTGILGRGLDLVNVKLVVNFDMPSSLDEYVHQVGRVGRLGQNGTAITFINNNSK 524
Query: 410 R 410
R
Sbjct: 525 R 525
Score = 201 (75.8 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 83 PSVLNRSPHEVQAFRDKHQMTLKGN-APNPITEFAEANFPDYVLKEVKRQGFDRPTPIQA 141
P ++ +++ + + ++++G PI +F FP+ + + +K+ G++ PTPIQ
Sbjct: 172 PFIVALRDDQIETLKQQLGISVQGQEVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQM 231
Query: 142 QGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQ 201
Q P+ + G +++ A TGSGKT A++LP I+ L P L+L PTRELA Q
Sbjct: 232 QMIPVGLLGRDILASADTGSGKTAAFLLPVIIRA-----LPEDKTPSALILTPTRELAIQ 286
Query: 202 IQEVARDFGSST-YLRSTCVYGGASKGPQ 229
I+ A++ +++ + GG PQ
Sbjct: 287 IERQAKELMRGLPRMKTVLLVGGLPLPPQ 315
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 271 (100.5 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 60/176 (34%), Positives = 107/176 (60%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
Q L++SAT R+V++LA+ + +I+I + S ++ Q ++ V +K+ K L
Sbjct: 180 QFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV----DKDTKSALLS 235
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
+ I+ + ++ +IF ETK K+ ++ G A H +SQ R +L++F++G+
Sbjct: 236 HLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIK 295
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
LVAT VAARG+D+D + V+N+D P +++Y+HRIGRTGR++ G + +F ++ N
Sbjct: 296 YLVATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDN 351
Score = 209 (78.6 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F++ D +++ V + G+ +PT IQ Q P+ + G +++ AQTG+GKT +++LP +
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDRQV 234
+ Q Q + L+L PTRELA Q+ E +G T L+S V+GG + Q R +
Sbjct: 63 LR-QGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 271 (100.5 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 60/176 (34%), Positives = 107/176 (60%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
Q L++SAT R+V++LA+ + +I+I + S ++ Q ++ V +K+ K L
Sbjct: 180 QFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITV----DKDTKSALLS 235
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
+ I+ + ++ +IF ETK K+ ++ G A H +SQ R +L++F++G+
Sbjct: 236 HLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIK 295
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
LVAT VAARG+D+D + V+N+D P +++Y+HRIGRTGR++ G + +F ++ N
Sbjct: 296 YLVATGVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDN 351
Score = 209 (78.6 bits), Expect = 1.7e-41, Sum P(2) = 1.7e-41
Identities = 41/120 (34%), Positives = 68/120 (56%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F++ D +++ V + G+ +PT IQ Q P+ + G +++ AQTG+GKT +++LP +
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDRQV 234
+ Q Q + L+L PTRELA Q+ E +G T L+S V+GG + Q R +
Sbjct: 63 LR-QGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
>UNIPROTKB|Q81JK1 [details] [associations]
symbol:BAS5307 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:1392 "Bacillus anthracis" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 305 (112.4 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 64/185 (34%), Positives = 109/185 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
R +++SAT P +V++L+ ++++ I I + ++ + + EV +E KL L
Sbjct: 178 RMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEV----REEEKL-SL 232
Query: 292 LNDISS-KDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L D+++ ++ + IIF T+ VD + + + + IHG Q++R V+ +FR G+
Sbjct: 233 LKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGK 292
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
LVATDVAARG+D+D++ VIN+D P E Y+HR GRTGR+ N+G + TF T R
Sbjct: 293 FRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDR 352
Query: 411 QAKDL 415
+++
Sbjct: 353 FLEEI 357
Score = 157 (60.3 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 38/112 (33%), Positives = 64/112 (57%)
Query: 116 AEANFPDYVL-KEVKRQ----GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
++ +F +Y L KEV+R G++ PT +Q + P+A+ ++V +QTGSGKT ++ +P
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIP 61
Query: 171 AIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYG 222
+ + KP LVL PTRELA Q++E + G +++ +YG
Sbjct: 62 LCEMVEWEEN-KPQ----ALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYG 108
>TIGR_CMR|BA_5703 [details] [associations]
symbol:BA_5703 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268809
InterPro:IPR005580 Pfam:PF03880 OMA:ENRFLEE RefSeq:NP_847849.1
RefSeq:YP_022388.1 RefSeq:YP_031544.1 ProteinModelPortal:Q81JK1
SMR:Q81JK1 IntAct:Q81JK1 DNASU:1085452
EnsemblBacteria:EBBACT00000008202 EnsemblBacteria:EBBACT00000014623
EnsemblBacteria:EBBACT00000021322 GeneID:1085452 GeneID:2819774
GeneID:2852974 KEGG:ban:BA_5703 KEGG:bar:GBAA_5703 KEGG:bat:BAS5307
ProtClustDB:CLSK883265 BioCyc:BANT260799:GJAJ-5380-MONOMER
BioCyc:BANT261594:GJ7F-5556-MONOMER Uniprot:Q81JK1
Length = 481
Score = 305 (112.4 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 64/185 (34%), Positives = 109/185 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
R +++SAT P +V++L+ ++++ I I + ++ + + EV +E KL L
Sbjct: 178 RMTMLFSATLPEDVERLSRTYMNAPTHIEIKAAGITTDKIEHTLFEV----REEEKL-SL 232
Query: 292 LNDISS-KDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L D+++ ++ + IIF T+ VD + + + + IHG Q++R V+ +FR G+
Sbjct: 233 LKDVTTIENPDSCIIFCRTQENVDHVYRQLDRVNYPCDKIHGGMVQEDRFGVMDDFRKGK 292
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
LVATDVAARG+D+D++ VIN+D P E Y+HR GRTGR+ N+G + TF T R
Sbjct: 293 FRYLVATDVAARGIDIDNITHVINYDIPLEKESYVHRTGRTGRAGNSGKAITFITPYEDR 352
Query: 411 QAKDL 415
+++
Sbjct: 353 FLEEI 357
Score = 157 (60.3 bits), Expect = 1.8e-41, Sum P(2) = 1.8e-41
Identities = 38/112 (33%), Positives = 64/112 (57%)
Query: 116 AEANFPDYVL-KEVKRQ----GFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLP 170
++ +F +Y L KEV+R G++ PT +Q + P+A+ ++V +QTGSGKT ++ +P
Sbjct: 2 SKKSFSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIP 61
Query: 171 AIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYG 222
+ + KP LVL PTRELA Q++E + G +++ +YG
Sbjct: 62 LCEMVEWEEN-KPQ----ALVLTPTRELAVQVKEDITNIGRFKRIKAAAIYG 108
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 318 (117.0 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 71/186 (38%), Positives = 105/186 (56%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P QV++ SAT P E+ ++ F+ I+I + L+ Q V V E K + L
Sbjct: 198 PGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLI 257
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L + ++ + ++F T+RKVD +T ++ + +HGD Q++RD V+KEFR G
Sbjct: 258 DLYDTLTI---TQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAG 314
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+L++TDV ARGLDV V VIN+D PNN E YIHRIGR+GR G + F Q +
Sbjct: 315 TTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 374
Query: 410 RQAKDL 415
R +D+
Sbjct: 375 RILRDI 380
Score = 138 (53.6 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 33/118 (27%), Positives = 62/118 (52%)
Query: 110 NPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYML 169
N I F + + +L+ + GF++P+ IQ + P + +++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 170 PAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKG 227
+ ++ +Q++ L+L+PTRELA QIQ+V G ++ GG + G
Sbjct: 83 SVLQSLD--TQVRETQA---LILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 309 (113.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ F+ ++I + L+ Q + V E K + L L
Sbjct: 213 QVVLLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLY 272
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 273 ETLTI---TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSR 329
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T+++ R
Sbjct: 330 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRIL 389
Query: 413 KDL 415
+D+
Sbjct: 390 RDI 392
Score = 147 (56.8 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 38/111 (34%), Positives = 64/111 (57%)
Query: 110 NPITE-FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYM 168
N IT+ F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GKT +
Sbjct: 33 NEITDNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFA 92
Query: 169 LPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
+ I Q +++ + LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 93 ----ISILQQLEIEQKETQ-ALVLAPTRELAQQIQKVILALGD--YMGASC 136
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 307 (113.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 268 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 384
Query: 413 KDL 415
+D+
Sbjct: 385 RDI 387
Score = 148 (57.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I + LK LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 83 TATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGASC 131
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 307 (113.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 268 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 384
Query: 413 KDL 415
+D+
Sbjct: 385 RDI 387
Score = 148 (57.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I + LK LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 83 TATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGASC 131
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 307 (113.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 268 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 384
Query: 413 KDL 415
+D+
Sbjct: 385 RDI 387
Score = 148 (57.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I + LK LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 83 TATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGASC 131
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 307 (113.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 268 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 384
Query: 413 KDL 415
+D+
Sbjct: 385 RDI 387
Score = 148 (57.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I + LK LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 83 TATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGASC 131
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 307 (113.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 268 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 384
Query: 413 KDL 415
+D+
Sbjct: 385 RDI 387
Score = 148 (57.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I + LK LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 83 TATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGASC 131
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 307 (113.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 268 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 384
Query: 413 KDL 415
+D+
Sbjct: 385 RDI 387
Score = 148 (57.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I + LK LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 83 TATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGASC 131
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 307 (113.1 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 65/183 (35%), Positives = 105/183 (57%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I + L+ Q + V E K + L L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLY 267
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
++ + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 268 ETLTI---TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 324
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 325 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 384
Query: 413 KDL 415
+D+
Sbjct: 385 RDI 387
Score = 148 (57.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 37/116 (31%), Positives = 63/116 (54%)
Query: 104 LKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGK 163
++ N + F + N + +L+ + GF++P+ IQ + + G +++ AQ+G+GK
Sbjct: 23 IESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGK 82
Query: 164 TLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTC 219
T + + + I + LK LVLAPTRELAQQIQ+V G Y+ ++C
Sbjct: 83 TATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGASC 131
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 318 (117.0 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 70/187 (37%), Positives = 107/187 (57%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
PD QV + SAT P E+ ++ F+ ++I + L+ Q V V EKE F
Sbjct: 207 PDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAV----EKEEWKF 262
Query: 290 GLLNDI-SSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L D+ + + +IF TKRKVD +++ ++++ + +HGD Q+ERD ++ EFR+
Sbjct: 263 DTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRS 322
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G + +L+ TDV ARG+DV V VIN+D PNN E YIHRIGR+GR G + F +
Sbjct: 323 GDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDD 382
Query: 409 SRQAKDL 415
+ +D+
Sbjct: 383 IKILRDI 389
Score = 136 (52.9 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 37/118 (31%), Positives = 61/118 (51%)
Query: 111 PITEFAEANFPDYVLKEVKRQGFDRPTPIQAQG-WPIAMSGSNMVGVAQTGSGKTLAYML 169
PIT F + + VL+ V GF++P+ IQ + PI + G +++ AQ+G+GKT L
Sbjct: 33 PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPI-LQGRDVIAQAQSGTGKTSMIAL 91
Query: 170 PAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKG 227
++ S+ L+L+PTRELA Q ++ + G +++ GG S G
Sbjct: 92 SVCQVVDTSSREVQA-----LILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVG 144
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 305 (112.4 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 69/183 (37%), Positives = 107/183 (58%)
Query: 233 QVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLL 292
QV++ SAT P +V ++ + F+ I+I LTL I+Q + E E E KL L
Sbjct: 208 QVVLLSATMPSDVLEVTKKFMRDPIRI---XLTLEG---IRQFY-INVERE-EWKLDTLC 259
Query: 293 NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
+ + + +IF T+RKVD +T+ + + +HGD Q+ERD +++EFR+G +
Sbjct: 260 DLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSR 319
Query: 353 ILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQA 412
+L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + T+++ R
Sbjct: 320 VLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTL 379
Query: 413 KDL 415
+D+
Sbjct: 380 RDI 382
Score = 149 (57.5 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 37/122 (30%), Positives = 66/122 (54%)
Query: 98 DKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVA 157
++ + ++ N + F + N + +L+ + GF++P+ IQ + + G +++ A
Sbjct: 17 ERPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQA 76
Query: 158 QTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRS 217
Q+G+GKT + + + I + LK LVLAPTRELAQQIQ+V G Y+ +
Sbjct: 77 QSGTGKTATFAISILQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGD--YMGA 129
Query: 218 TC 219
+C
Sbjct: 130 SC 131
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 87/199 (43%), Positives = 133/199 (66%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLT-LSANHNIQQVVEVCAEHEKENKLF 289
+RQ LM++ATWP+EV++LA +F++S +++ +G LSAN I QVVEV + +KE KL
Sbjct: 328 ERQTLMFTATWPKEVRELANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLI 387
Query: 290 GLLNDISSKD--ENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
LL ++ + +NK +IFA K++ +I ++ ++ IHGD SQQ+R L F+
Sbjct: 388 QLLRKYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFK 447
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ +L+ATDVAARGLD+ +VK VIN +P EDY+HRIGRTGR+ GT++T FT+
Sbjct: 448 SGQSNLLLATDVAARGLDIPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTED 507
Query: 408 NSRQAKDLIDVLTESNHPV 426
+ L ++L +N PV
Sbjct: 508 EKHLSGALCNILRGANQPV 526
Score = 219 (82.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 65/239 (27%), Positives = 118/239 (49%)
Query: 89 SPHEVQAFRDKHQMTLK---GNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWP 145
S ++ F +++T++ ++ PI F + + ++ + FD+PTPIQ+ WP
Sbjct: 128 SQSDIDKFLSDNEITVEDPSSSSLRPILSFDQVQLTSAITSKLSK--FDKPTPIQSVSWP 185
Query: 146 IAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEV 205
+SG +++GVA+TGSGKT A+ +PAI +I K VL ++PTRELA QI +
Sbjct: 186 FLLSGKDVIGVAETGSGKTFAFGVPAINNIITTGNTKTLS---VLCISPTRELALQIYDN 242
Query: 206 ARDFGSSTYLRSTCVYGGASKGPQPDR-QVLMWSATWPREVQKLAEDFLDSYIQINIGSL 264
+ + + + VYGG SK Q + + P + L D IN+G +
Sbjct: 243 LIELTADSGVNCVAVYGGVSKDDQIRKIKTANVVVATPGRLVDLINDGA-----INLGKV 297
Query: 265 TLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENKTIIFAET-KRKVDKITKSIQN 322
N+ + + E E + ++++ +S E +T++F T ++V ++ + N
Sbjct: 298 ----NYLVLDEADRMLEKGFEEDIKTIISN-TSNSERQTLMFTATWPKEVRELANNFMN 351
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 297 (109.6 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 65/184 (35%), Positives = 107/184 (58%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
RQ L++SAT+ V+KLA + + I+ +A+ + QVV + K L L
Sbjct: 180 RQNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTAD-TVSQVVYPVEQRRKRELLSEL 238
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
I K+ + ++F T+ D + K + G + +HG+K+Q R L+EF +G+
Sbjct: 239 ---IGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKV 295
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQ 411
+LVAT+VAARGLD+ +++V+NFD P +EDY+HRIGRTGR+ +G + +F +++ R
Sbjct: 296 RVLVATEVAARGLDIPSLEYVVNFDLPFLAEDYVHRIGRTGRAGKSGVAISFVSREEERT 355
Query: 412 AKDL 415
D+
Sbjct: 356 LADI 359
Score = 156 (60.0 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 39/120 (32%), Positives = 57/120 (47%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F +F +L+ + G+ + TPIQ Q P G +++ AQTG+GKT A+ LP +
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 175 I--NHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQPDR 232
+ N LK VL+L PTRELA Q+ E + +YGG Q +
Sbjct: 63 MVENPSETLKSNTR--VLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQK 120
>ZFIN|ZDB-GENE-050522-359 [details] [associations]
symbol:zgc:112350 "zgc:112350" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-359 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG100512 KO:K14777
EMBL:BC095776 IPI:IPI00488135 RefSeq:NP_001018522.1
UniGene:Dr.84733 ProteinModelPortal:Q502B4 SMR:Q502B4 GeneID:553715
KEGG:dre:553715 NextBio:20880445 Uniprot:Q502B4
Length = 512
Score = 292 (107.8 bits), Expect = 4.3e-41, Sum P(2) = 4.3e-41
Identities = 63/176 (35%), Positives = 101/176 (57%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
DR+ ++SAT ++VQKL L ++ ++ S + + +QQ K+ L
Sbjct: 253 DRRTFLFSATMTKKVQKLQRAALQDPVKCSVSSKYATVD-KLQQFYIFIPSKYKDCYLVS 311
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
+LN+++ N ++F T ++ ++N G A+ +HG SQ +R L +F++
Sbjct: 312 ILNELAG---NSFMVFCGTCNNTQRVALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKS 368
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
+L+ATDVA+RGLD+ V VINFD P +S+DYIHR+GRT R+ +G S TF TQ
Sbjct: 369 RSVLLATDVASRGLDIPHVDCVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVTQ 424
Score = 171 (65.3 bits), Expect = 4.3e-41, Sum P(2) = 4.3e-41
Identities = 41/111 (36%), Positives = 62/111 (55%)
Query: 113 TEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAI 172
T F E + + + + G+ +PT IQ + P+A+ G +++G+A+TGSGKT A+ +P +
Sbjct: 79 TSFKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVL 138
Query: 173 VHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
QS L LVL PTRELA QI E GSS +++ + GG
Sbjct: 139 -----QSLLACAQRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGG 184
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 318 (117.0 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 71/186 (38%), Positives = 105/186 (56%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P QV++ SAT P E+ ++ F+ I+I + L+ Q V V E K + L
Sbjct: 198 PGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVDREEWKFDTLI 257
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L + ++ + ++F T+RKVD +T ++ + +HGD Q++RD V+KEFR G
Sbjct: 258 DLYDTLTI---TQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAG 314
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+L++TDV ARGLDV V VIN+D PNN E YIHRIGR+GR G + F Q +
Sbjct: 315 TTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQDDV 374
Query: 410 RQAKDL 415
R +D+
Sbjct: 375 RILRDI 380
Score = 134 (52.2 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 32/116 (27%), Positives = 61/116 (52%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
I F + + +L+ + GF++P+ IQ + P + +++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKG 227
+ ++ +Q++ L+L+PTRELA QIQ+V G ++ GG + G
Sbjct: 85 LQSLD--TQVRETQA---LILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLG 135
>UNIPROTKB|Q8EJQ5 [details] [associations]
symbol:rhlB "ATP-dependent RNA helicase RhlB"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 286 (105.7 bits), Expect = 5.8e-41, Sum P(2) = 5.8e-41
Identities = 69/200 (34%), Positives = 116/200 (58%)
Query: 228 PQPDRQV-LMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
P D+++ +++SAT +VQ+LA D ++ +++ I ++ NI++ + ++ E+
Sbjct: 187 PNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSK-NIKEEIFYPSQ---ED 242
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
K+ LL I K I+F+ TK + + ++ G + GD Q++R +L++F
Sbjct: 243 KMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQF 302
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
G+ ILVATDVAARGL + DV V N+D P++ EDY+HRIGRTGR+ N G S +F +
Sbjct: 303 TQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACE 362
Query: 407 QNSRQAKDLIDVLTESNHPV 426
+ A +L + T NH +
Sbjct: 363 E---YALNLPAIETYINHSI 379
Score = 169 (64.5 bits), Expect = 5.8e-41, Sum P(2) = 5.8e-41
Identities = 45/125 (36%), Positives = 68/125 (54%)
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
+FA+ V + + GF+ TPIQA P+ + ++ G AQTG+GKT+A+++
Sbjct: 10 KFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFN 69
Query: 174 HINHQSQLKPG---DGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQP 230
H+ S + G + P +++APTRELA QI + A T L+ VYGG S Q
Sbjct: 70 HLL-SSSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQ- 127
Query: 231 DRQVL 235
R+VL
Sbjct: 128 -RKVL 131
>TIGR_CMR|SO_0407 [details] [associations]
symbol:SO_0407 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] HAMAP:MF_00661 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR023554
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732 ProtClustDB:PRK04837
RefSeq:NP_716045.1 ProteinModelPortal:Q8EJQ5 GeneID:1168284
KEGG:son:SO_0407 PATRIC:23520517 OMA:PANAERQ Uniprot:Q8EJQ5
Length = 439
Score = 286 (105.7 bits), Expect = 5.8e-41, Sum P(2) = 5.8e-41
Identities = 69/200 (34%), Positives = 116/200 (58%)
Query: 228 PQPDRQV-LMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
P D+++ +++SAT +VQ+LA D ++ +++ I ++ NI++ + ++ E+
Sbjct: 187 PNADQRLNMLFSATLSMKVQELAYDHMNDPVKVEIAPEEKTSK-NIKEEIFYPSQ---ED 242
Query: 287 KLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
K+ LL I K I+F+ TK + + ++ G + GD Q++R +L++F
Sbjct: 243 KMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQF 302
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
G+ ILVATDVAARGL + DV V N+D P++ EDY+HRIGRTGR+ N G S +F +
Sbjct: 303 TQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACE 362
Query: 407 QNSRQAKDLIDVLTESNHPV 426
+ A +L + T NH +
Sbjct: 363 E---YALNLPAIETYINHSI 379
Score = 169 (64.5 bits), Expect = 5.8e-41, Sum P(2) = 5.8e-41
Identities = 45/125 (36%), Positives = 68/125 (54%)
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
+FA+ V + + GF+ TPIQA P+ + ++ G AQTG+GKT+A+++
Sbjct: 10 KFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFN 69
Query: 174 HINHQSQLKPG---DGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQP 230
H+ S + G + P +++APTRELA QI + A T L+ VYGG S Q
Sbjct: 70 HLL-SSSIPEGRQLNQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQ- 127
Query: 231 DRQVL 235
R+VL
Sbjct: 128 -RKVL 131
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 87/199 (43%), Positives = 132/199 (66%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ R +M+SAT+P+E+Q LA DFLD YI + +G + S + NI Q V + +K +
Sbjct: 117 PKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVG-STSENITQKVVWVEDLDKRSF 175
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L +L S ++ T++F ETK+ D + + + G+A IHGD+SQ++R+ L +FR
Sbjct: 176 LLDILGATGS--DSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 233
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQ 407
+G++ ILVAT VAARGLD+ +V+ VINFD P++ E+Y+HRIGRTGR N G + +FF ++
Sbjct: 234 SGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEK 293
Query: 408 NSRQAKDLIDVLTESNHPV 426
N KDL+D+L E+ V
Sbjct: 294 NMNITKDLLDLLVEAKQEV 312
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 277 (102.6 bits), Expect = 7.7e-41, Sum P(2) = 7.7e-41
Identities = 59/181 (32%), Positives = 103/181 (56%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
D Q ++ SAT P +++L + L + ++I G L +++Q++ + K+ KLF
Sbjct: 377 DCQTILVSATIPDSIEQLTDQLLHNPVRIITGDKNLPCA-SVRQIILWVEDPAKKKKLFE 435
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNY-GWAAVGIHGDKSQQERDYVLKEFRNG 349
+LND + ++F + K D +++++Q G + IH +KSQ ER +LK G
Sbjct: 436 ILND-QKLFKPPVLVFVDCKLGADLLSEAVQKITGLNSTSIHSEKSQVERRDILKGLLEG 494
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
++V+T V RGLD+ +VK V+NFD P++ ++Y+H++GR GR GT+ TF +
Sbjct: 495 DYEVVVSTGVLGRGLDLVNVKLVVNFDMPSSMDEYVHQVGRVGRLGQNGTAITFINNNSK 554
Query: 410 R 410
R
Sbjct: 555 R 555
Score = 210 (79.0 bits), Expect = 7.7e-41, Sum P(2) = 7.7e-41
Identities = 45/149 (30%), Positives = 83/149 (55%)
Query: 83 PSVLNRSPHEVQAFRDKHQMTLKG-NAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQA 141
P ++ +++ + + ++++G + PI +F FP+ + + +K+ G++ PTPIQ
Sbjct: 172 PFIVTLKEDQIETLKQQLGISVQGQDVARPIIDFEHCGFPETLNQNLKKSGYEVPTPIQM 231
Query: 142 QGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQ 201
Q P+ + G +++ A TGSGKT A++LP I+ + + P L+L PTRELA Q
Sbjct: 232 QMIPVGLLGRDILASADTGSGKTAAFLLPVIIRAFSEDKT-----PSALILTPTRELAIQ 286
Query: 202 IQEVARDFGSST-YLRSTCVYGGASKGPQ 229
I+ A++ S +++ + GG PQ
Sbjct: 287 IERQAKELMSGLPRMKTVLLVGGLPLPPQ 315
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 279 (103.3 bits), Expect = 8.0e-41, Sum P(2) = 8.0e-41
Identities = 64/176 (36%), Positives = 101/176 (57%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
+R+ L++SAT +V+KL L +++ + S + + IQ+ + +H K+ L
Sbjct: 220 ERRTLLFSATMTSKVEKLQRASLHQPVRVAVSSKFSTVDTLIQRYLFFPFKH-KDTYLVY 278
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L+N+++ N IIFA T ++ ++ G++A+ +HG SQ R L +F++G
Sbjct: 279 LVNELAG---NSIIIFARTVNDTQRLAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGA 335
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
LVATDVAARGLD+ V VIN+D P +S+ YIHR+GRT R+ G S TQ
Sbjct: 336 RSTLVATDVAARGLDIPLVDVVINYDIPTDSKAYIHRVGRTARAGRAGKSIALVTQ 391
Score = 197 (74.4 bits), Expect = 8.0e-41, Sum P(2) = 8.0e-41
Identities = 55/158 (34%), Positives = 79/158 (50%)
Query: 71 LPPFEKNFFHPSP-SVLNRSPHEVQAFRDKHQMTLKGNAPN---PITEFAEANFPDYVLK 126
+ P EK S LN+ + +K G++ N P T F E D + +
Sbjct: 1 MAPSEKKLTEDKKNSSLNKKIETSNSSSEKSSENNNGDSQNNEAPKT-FKELGVIDELCE 59
Query: 127 EVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHI-NHQSQLKPGD 185
++ GF PTPIQ + P+ ++ +++G+AQTGSGKT A+ LP I + N+ S
Sbjct: 60 ACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPF---- 115
Query: 186 GPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGG 223
+VLAPTRELA QI E G S +RS + GG
Sbjct: 116 --FAVVLAPTRELAYQISEQFEAIGGSIGVRSVVIVGG 151
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 302 (111.4 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 67/185 (36%), Positives = 105/185 (56%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQIN-IGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
RQ +++SAT P V+KLA +LD+ + I+ +G I+ K L
Sbjct: 284 RQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSD 343
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
L+ + +K KTI+F +TKR D+++ ++ N A +HGD SQ +R+ L FR G+
Sbjct: 344 LIT-VYAKG-GKTIVFTQTKRDADEVSLALSN-SIATEALHGDISQHQRERTLNAFRQGK 400
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSR 410
+LVATDVA+RGLD+ +V VI+++ PN+ E ++HR GRTGR+ G++ T R
Sbjct: 401 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKR 460
Query: 411 QAKDL 415
+ L
Sbjct: 461 TVRSL 465
Score = 167 (63.8 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 47/153 (30%), Positives = 79/153 (51%)
Query: 84 SVLNRSPHEVQAFRDKHQMTLKGNAPNPITEFAEA------NFPDYVLKEVKRQGFDRPT 137
SVL+ + D + L G+ N + E + P + + ++++G
Sbjct: 67 SVLSEEAFKSLGLSDHDEYDLDGDNNNVEADDGEELAISKLSLPQRLEESLEKRGITHLF 126
Query: 138 PIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQ-----LKPGDGPIVLVL 192
PIQ A+ G +++ A+TG+GKTLA+ +P I + ++ + G P LVL
Sbjct: 127 PIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVL 186
Query: 193 APTRELAQQIQEVARDFGSSTYLRSTCVYGGAS 225
APTRELA+Q+++ ++ S+ YL + CVYGG S
Sbjct: 187 APTRELAKQVEKEIKE--SAPYLSTVCVYGGVS 217
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 306 (112.8 bits), Expect = 8.6e-41, Sum P(2) = 8.6e-41
Identities = 63/178 (35%), Positives = 108/178 (60%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
+RQ L++SAT+P ++Q +A+ + + + + ++T N Q ++ + + L
Sbjct: 175 ERQTLLFSATFPEQIQSIAKQIMYNPVMVK-AAVTHEKNTIEQHFYQLDDDKSRMQALQL 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL + K E+ ++F TKR+ K+ ++ G++ + +HGD Q++RD L +F N
Sbjct: 234 LL--LEHKPES-AVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
A +LVATDVAARGLD+D + V N+ ++E +IHRIGRTGR+ + G +YTF+ Q+
Sbjct: 291 ACVLVATDVAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQD 348
Score = 146 (56.5 bits), Expect = 8.6e-41, Sum P(2) = 8.6e-41
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F+ +L+ + G++ TPIQAQ P ++G +++G +TGSGKT A+ L +
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 175 IN-HQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTY-LRSTCVYGGASKGPQ 229
++ + +++ LVL PTRELA Q+ + R + ++ + GG GPQ
Sbjct: 63 LDVKRFRIQ------TLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQ 113
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 306 (112.8 bits), Expect = 8.6e-41, Sum P(2) = 8.6e-41
Identities = 63/178 (35%), Positives = 108/178 (60%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
+RQ L++SAT+P ++Q +A+ + + + + ++T N Q ++ + + L
Sbjct: 175 ERQTLLFSATFPEQIQSIAKQIMYNPVMVK-AAVTHEKNTIEQHFYQLDDDKSRMQALQL 233
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LL + K E+ ++F TKR+ K+ ++ G++ + +HGD Q++RD L +F N
Sbjct: 234 LL--LEHKPES-AVVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKS 290
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
A +LVATDVAARGLD+D + V N+ ++E +IHRIGRTGR+ + G +YTF+ Q+
Sbjct: 291 ACVLVATDVAARGLDIDALDAVFNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFYNDQD 348
Score = 146 (56.5 bits), Expect = 8.6e-41, Sum P(2) = 8.6e-41
Identities = 36/117 (30%), Positives = 62/117 (52%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F+ +L+ + G++ TPIQAQ P ++G +++G +TGSGKT A+ L +
Sbjct: 3 FSTLKLKTELLENLSSMGYNEMTPIQAQSLPAILAGEDVIGQGKTGSGKTAAFGLGLLNK 62
Query: 175 IN-HQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTY-LRSTCVYGGASKGPQ 229
++ + +++ LVL PTRELA Q+ + R + ++ + GG GPQ
Sbjct: 63 LDVKRFRIQ------TLVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQ 113
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 312 (114.9 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 70/194 (36%), Positives = 118/194 (60%)
Query: 227 GPQP-DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKE 285
G P DRQ L++SAT+P +++ ++E + + + I S + + Q+ +V + ++
Sbjct: 179 GRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTIS-QKFFKVGNDDDRL 237
Query: 286 NKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
+ L LL + ++ E+ T IF TK++ ++ ++ G++ + +HGD Q++RD L
Sbjct: 238 DALRLLL--LGNQVES-TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLR 294
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
F N A ILVATDVAARGLD+D + VIN+ +SE ++HRIGRTGR+ +TG +Y+ F+
Sbjct: 295 FANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFS 354
Query: 406 QQNSRQAKDLIDVL 419
+ S + L D L
Sbjct: 355 DKESYKVGLLEDYL 368
Score = 140 (54.3 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 35/116 (30%), Positives = 63/116 (54%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F+ + ++K + G+++ TPIQA+ P + G +++G A+TGSGKT A+ L A+++
Sbjct: 12 FSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGL-ALLN 70
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTY-LRSTCVYGGASKGPQ 229
+ + +V+ PTRELA Q+ + R + ++ + GG GPQ
Sbjct: 71 KLEVKKFRIQS----MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQ 122
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 312 (114.9 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 70/194 (36%), Positives = 118/194 (60%)
Query: 227 GPQP-DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKE 285
G P DRQ L++SAT+P +++ ++E + + + I S + + Q+ +V + ++
Sbjct: 179 GRTPLDRQTLLFSATFPDQIKSISESIMTDPVMVKIASSEDQSTIS-QKFFKVGNDDDRL 237
Query: 286 NKLFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
+ L LL + ++ E+ T IF TK++ ++ ++ G++ + +HGD Q++RD L
Sbjct: 238 DALRLLL--LGNQVES-TAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLR 294
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
F N A ILVATDVAARGLD+D + VIN+ +SE ++HRIGRTGR+ +TG +Y+ F+
Sbjct: 295 FANKSASILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAYSLFS 354
Query: 406 QQNSRQAKDLIDVL 419
+ S + L D L
Sbjct: 355 DKESYKVGLLEDYL 368
Score = 140 (54.3 bits), Expect = 9.4e-41, Sum P(2) = 9.4e-41
Identities = 35/116 (30%), Positives = 63/116 (54%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVH 174
F+ + ++K + G+++ TPIQA+ P + G +++G A+TGSGKT A+ L A+++
Sbjct: 12 FSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDVIGEAKTGSGKTAAFGL-ALLN 70
Query: 175 INHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTY-LRSTCVYGGASKGPQ 229
+ + +V+ PTRELA Q+ + R + ++ + GG GPQ
Sbjct: 71 KLEVKKFRIQS----MVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQ 122
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 313 (115.2 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 70/186 (37%), Positives = 107/186 (57%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P QV++ SAT P +V ++ F+ + ++I + L+ Q V V E K L
Sbjct: 193 PTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLT 252
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L + IS + +IF T+RKV+++T ++N + I+ D QQERD ++KEFR+G
Sbjct: 253 DLYDSISV---TQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSG 309
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ IL++TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T ++
Sbjct: 310 SSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDV 369
Query: 410 RQAKDL 415
++L
Sbjct: 370 GAMREL 375
Score = 136 (52.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 39/133 (29%), Positives = 68/133 (51%)
Query: 94 QAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQG-WPIAMSGSN 152
+ D + ++ N + +F + + +L+ V GF+ P+ IQ + PI + G +
Sbjct: 3 EGITDIEESQIQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPI-IEGHD 61
Query: 153 MVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSS 212
++ AQ+G+GKT + + A+ I+ + +K P L+LAPTRELA QIQ+V
Sbjct: 62 VLAQAQSGTGKTGTFSIAALQRID--TSVK---APQALMLAPTRELALQIQKVVMALAFH 116
Query: 213 TYLRSTCVYGGAS 225
++ GG S
Sbjct: 117 MDIKVHACIGGTS 129
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 313 (115.2 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 70/186 (37%), Positives = 107/186 (57%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P QV++ SAT P +V ++ F+ + ++I + L+ Q V V E K L
Sbjct: 193 PTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKYECLT 252
Query: 290 GLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNG 349
L + IS + +IF T+RKV+++T ++N + I+ D QQERD ++KEFR+G
Sbjct: 253 DLYDSISV---TQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSG 309
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNS 409
+ IL++TD+ ARG+DV V VIN+D P N E+YIHRIGR GR G + F T ++
Sbjct: 310 SSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDV 369
Query: 410 RQAKDL 415
++L
Sbjct: 370 GAMREL 375
Score = 136 (52.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 39/133 (29%), Positives = 68/133 (51%)
Query: 94 QAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQG-WPIAMSGSN 152
+ D + ++ N + +F + + +L+ V GF+ P+ IQ + PI + G +
Sbjct: 3 EGITDIEESQIQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPI-IEGHD 61
Query: 153 MVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSS 212
++ AQ+G+GKT + + A+ I+ + +K P L+LAPTRELA QIQ+V
Sbjct: 62 VLAQAQSGTGKTGTFSIAALQRID--TSVK---APQALMLAPTRELALQIQKVVMALAFH 116
Query: 213 TYLRSTCVYGGAS 225
++ GG S
Sbjct: 117 MDIKVHACIGGTS 129
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 312 (114.9 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 76/224 (33%), Positives = 122/224 (54%)
Query: 194 PTRELAQQIQEVARDFGSSTYLRS-TCVYGGASKGPQPDRQVLMWSATWPREVQKLAEDF 252
PTR + I + A + S + + VY G Q +++ SAT ++V + E F
Sbjct: 171 PTRHIKMMILDEADEMLSLGFQQQINDVYRYLPNGTQ----IVLVSATLTQDVVSMTEKF 226
Query: 253 LDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDI-SSKDENKTIIFAETKR 311
+ ++I + L+ + Q V V EKE+ FG L DI S + +IF TK+
Sbjct: 227 MTKPVRILLKRDELTLDGIKQFFVSV----EKEDWKFGTLCDIYDSLTITQAVIFCNTKK 282
Query: 312 KVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGILVATDVAARGLDVDDVKF 371
KVD++T+ +++ + +HGD Q+ER+ ++K FR+G +L+ TD+ ARG+DV V
Sbjct: 283 KVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSL 342
Query: 372 VINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQNSRQAKDL 415
VIN+D P + E+YIHRIGR+GR G + F + R +D+
Sbjct: 343 VINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDI 386
Score = 137 (53.3 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 36/95 (37%), Positives = 57/95 (60%)
Query: 115 FAEANFPDYVLKEVKRQGFDRPTPIQAQG-WPIAMSGSNMVGVAQTGSGKTLAYMLPAI- 172
F + +L+ + GF++P+ IQ + PI + G + + AQ+G+GKT + + A+
Sbjct: 34 FESMGLREELLRGIFNYGFEKPSAIQQRAILPI-IKGRDTIAQAQSGTGKTATFSIGALQ 92
Query: 173 -VHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVA 206
V +N +S P VL+L+PTRELAQQIQ+VA
Sbjct: 93 CVEVNVRS-------PQVLILSPTRELAQQIQKVA 120
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 434 (157.8 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 90/204 (44%), Positives = 133/204 (65%)
Query: 228 PQPD-RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKEN 286
P P RQ +++SAT+PRE+Q+LA DFL +YI + +G + S + +Q+V E + +K +
Sbjct: 329 PPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRV-EFVHDSDKRS 387
Query: 287 KLFGLLN-DISSKDENK---TIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYV 342
L LL+ + ++ K T++F ETK+ D + + G+ A IHGD+SQQER+
Sbjct: 388 HLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVA 447
Query: 343 LKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYT 402
L+ F+ GR ILVATDVAARGLD+ V V+NFD PN+ +DY+HRIGRTGR+ N+G +
Sbjct: 448 LRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGLATA 507
Query: 403 FFTQQNSRQAKDLIDVLTESNHPV 426
FF N+ AK L +++ E+N V
Sbjct: 508 FFNDNNTTMAKPLAELMQEANQEV 531
Score = 217 (81.4 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 77/276 (27%), Positives = 133/276 (48%)
Query: 73 PFEKNFFHPSPSVLNRSPHEV---QAFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVK 129
PF N + P+V N + V +A+ D T N P P+ FAE + + + ++
Sbjct: 105 PFG-NDGNADPAV-NEQENTVINFEAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIQ 162
Query: 130 RQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQL-KP----G 184
R + +PTP+Q PI +G +++ AQTGSGKT A+ P I I + +P G
Sbjct: 163 RCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRG 222
Query: 185 DGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQP---DRQVLMWSATW 241
P+ ++L+PTRELA QI + AR F T ++ YGG Q +R V + AT
Sbjct: 223 VYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVAT- 281
Query: 242 PREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDEN 301
P + L E ++++ + A +++++ E + K+ + D+
Sbjct: 282 PGRLNDLLERG-----RVSLQMVRFLALDEADRMLDMGFEPQIR-KIVQQM-DMPPPGVR 334
Query: 302 KTIIFAET-KRKVDKITKS-IQNYGWAAVGIHGDKS 335
+T++F+ T R++ ++ + NY + AVG G +
Sbjct: 335 QTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSST 370
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 318 (117.0 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 76/189 (40%), Positives = 109/189 (57%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINI--GSLTLSANHNIQQVVEVCAEHEKENK 287
P QV++ SAT P E+ ++ F+ I+I + LTL I+Q V E E E K
Sbjct: 198 PATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG---IKQFF-VAVERE-EWK 252
Query: 288 LFGLLNDI-SSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEF 346
F L D+ + + +IF TKRKVD +T+ ++ + +HGD Q+ERD ++KEF
Sbjct: 253 -FDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEF 311
Query: 347 RNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
R G++ +L+ TDV ARG+DV V VIN+D PNN E YIHRIGR+GR G + F
Sbjct: 312 RAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKS 371
Query: 407 QNSRQAKDL 415
+ R +D+
Sbjct: 372 DDIRILRDI 380
Score = 130 (50.8 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 34/116 (29%), Positives = 60/116 (51%)
Query: 112 ITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPA 171
I F N + +L+ + GF++P+ IQ + + G +++ AQ+G+GKT + +
Sbjct: 25 IPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISI 84
Query: 172 IVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKG 227
+ ++ + L+ VL L+PTRELA QIQ+V G ++ GG + G
Sbjct: 85 LQSLD--TTLRETQ---VLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLG 135
>SGD|S000002651 [details] [associations]
symbol:PRP28 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
"U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
Uniprot:P23394
Length = 588
Score = 292 (107.8 bits), Expect = 1.9e-40, Sum P(2) = 1.9e-40
Identities = 70/174 (40%), Positives = 105/174 (60%)
Query: 231 DRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFG 290
+RQ LM++AT ++K+A ++ + IG T + IQQVVE A+++ E+K F
Sbjct: 371 NRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVET-GSEPLIQQVVEY-ADND-EDK-FK 426
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGI-HGDKSQQERDYVLKEFRNG 349
L I +K + IIF K+ D + + Q V I HG KSQ++R++ L+ FR
Sbjct: 427 KLKPIVAKYDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTN 486
Query: 350 RAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTF 403
+ I++AT+VAARGLD+ +V V+NF +DYIHRIGRTGR+ N GT+ +F
Sbjct: 487 KVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSF 540
Score = 169 (64.5 bits), Expect = 1.9e-40, Sum P(2) = 1.9e-40
Identities = 43/112 (38%), Positives = 63/112 (56%)
Query: 102 MTLKGNAPNPITEFAEANF-PDYVLKEVKRQ-GFDRPTPIQAQGWPIAMSGS---NMVGV 156
+T G NP+ + E N P +L+ + ++ F PTPIQ P + + +GV
Sbjct: 161 VTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGV 220
Query: 157 AQTGSGKTLAYMLPAIVHINHQSQLKPG----DGPIVLVLAPTRELAQQIQE 204
A TGSGKTLA+++P ++ ++ P DGP L+LAPTREL QQIQ+
Sbjct: 221 ASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQK 272
Score = 51 (23.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 20/50 (40%), Positives = 24/50 (48%)
Query: 308 ETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAGILVAT 357
ET+ KV KI NY + I G S +E + L E G ILVAT
Sbjct: 273 ETQ-KVTKIWSKESNYDCKVISIVGGHSLEEISFSLSE---G-CDILVAT 317
>DICTYBASE|DDB_G0291804 [details] [associations]
symbol:ddx6 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0291804 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006397 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 KO:K12614 InterPro:IPR014014 PROSITE:PS51195
EMBL:AAFI02000185 RefSeq:XP_629938.1 HSSP:P39517
ProteinModelPortal:Q54E49 SMR:Q54E49 PRIDE:Q54E49
EnsemblProtists:DDB0234196 GeneID:8628344 KEGG:ddi:DDB_G0291804
OMA:QFMEKHL ProtClustDB:CLSZ2429504 Uniprot:Q54E49
Length = 423
Score = 290 (107.1 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 71/203 (34%), Positives = 109/203 (53%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINI-GSLTLSANHNIQQVVEVCAEHEKEN 286
PQ RQ+L++SAT+P V+ E +L +IN+ LTL V + A E+
Sbjct: 220 PQ-QRQILLFSATFPVTVKSFKEHYLQQAFEINLMEELTLKG------VTQYYAFVEERQ 272
Query: 287 KLFGLLNDISSKDE-NKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKE 345
K+ LN + SK + N++IIF + +V+ + K I G++ IH Q R+ V +
Sbjct: 273 KIH-CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFFIHAKMVQAHRNRVFHD 331
Query: 346 FRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFT 405
FRNG LV++D+ RG+D+ DV VINFD+P +SE Y+HRIGR+GR + G + T
Sbjct: 332 FRNGACRNLVSSDLFTRGIDIQDVNVVINFDFPKHSETYLHRIGRSGRFGHLGLAINLIT 391
Query: 406 QQNSRQAKDLIDVLTESNHPVDP 428
++ + L P+ P
Sbjct: 392 YEDRFSLYKIEQELGTEIKPIPP 414
Score = 156 (60.0 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 97 RDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGV 156
RD+ + T A +F + + +L+ + +G+ +P+PIQ + PIA++G +++
Sbjct: 34 RDERRQTEDVTATEG-NDFDDLHLKRDLLRGIFEKGYVKPSPIQEKAIPIALAGRDIMAR 92
Query: 157 AQTGSGKTLAYMLPAIVHINHQSQLKPGDGPI-VLVLAPTRELAQQIQEVARDFGSSTYL 215
A+ G+GKT ++++PA+ + P I VL+L PTRELA Q +V ++ G +
Sbjct: 93 AKNGTGKTASFLIPAL------EKTDPTKDVIQVLILVPTRELALQTSQVCKELGKYMNV 146
Query: 216 RSTCVYGGAS 225
+ GG S
Sbjct: 147 QVMASTGGTS 156
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 269 (99.8 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 63/175 (36%), Positives = 99/175 (56%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGL 291
R ++SAT +++KL L + +++ + S +A++ +Q ++ V + K L L
Sbjct: 298 RTTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTADNLVQSMMLV-NDGYKNTILIHL 356
Query: 292 LNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRA 351
LN+ K I+F T + + G+ AV +HG SQ +R L +F++ +A
Sbjct: 357 LNEFMGKS---IIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQA 413
Query: 352 GILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
ILVATDVAARGLD+ V VIN+D P +S+ YIHR+GRT R+ +G S + TQ
Sbjct: 414 NILVATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGRSGKSISLITQ 468
Score = 216 (81.1 bits), Expect = 2.3e-40, Sum P(2) = 2.3e-40
Identities = 51/122 (41%), Positives = 73/122 (59%)
Query: 103 TLKGNAPNPITEFAEANF-PDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGS 161
T+ +A F E N PD +L+ ++ F +PTPIQ++ P A+ G +++G+AQTGS
Sbjct: 113 TIDPDAELKFKTFKELNLVPD-LLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGS 171
Query: 162 GKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVY 221
GKT A+ +P + + H Q P LVLAPTREL QI++ GSS LRS+C+
Sbjct: 172 GKTAAFAIPILQSLWHAQQ--PY---FALVLAPTRELTFQIKDTFDALGSSMGLRSSCIV 226
Query: 222 GG 223
GG
Sbjct: 227 GG 228
Score = 37 (18.1 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 312 KVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGRAG 352
K DK K + + A+ +H DK+ E KE + R G
Sbjct: 487 KEDKPPKEVLD----ALHVHVDKATAEAIRQTKEIHDKRNG 523
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 306 (112.8 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 65/187 (34%), Positives = 108/187 (57%)
Query: 230 PDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLF 289
P QV++ SAT P++V ++ F + ++I + L+ Q + V EKE F
Sbjct: 193 PGTQVVVVSATLPQDVLEMTNKFTTNPVRILVKRDELTLEGLKQYFIAV----EKEEWKF 248
Query: 290 GLLNDI-SSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRN 348
L D+ + + +IF ++RKVD +T+ ++ + +HG+ Q+ERD ++++FR
Sbjct: 249 DTLCDLYDTLTITQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQ 308
Query: 349 GRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQQN 408
G + +L+ TD+ ARG+DV V VIN+D P N E+YIHRIGR+GR G + F T ++
Sbjct: 309 GNSRVLICTDIWARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNED 368
Query: 409 SRQAKDL 415
R +D+
Sbjct: 369 VRILRDI 375
Score = 139 (54.0 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 35/118 (29%), Positives = 60/118 (50%)
Query: 110 NPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYML 169
N ++ F E N + +L+ + G++ P+ +Q++ G +++ AQ+G+GKT + +
Sbjct: 18 NAVSSFEEMNLKEDLLRGIYAYGYETPSAVQSRAIIQICKGRDVIAQAQSGTGKTATFSI 77
Query: 170 PAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKG 227
+ I+ L D L+L+PTRELA QIQ V G ++ GG S G
Sbjct: 78 GILQSID----LSVRDTQ-ALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVG 130
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 276 (102.2 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 67/171 (39%), Positives = 100/171 (58%)
Query: 232 RQVLMWSATWPR-EVQKLAEDFLDSYIQINIGSLTLSANH-NIQQVVEVCAEH--EKENK 287
RQ LM+SAT E+ ++A L + + + IG T A H +I Q + +C +H KE
Sbjct: 180 RQTLMFSATLDHSEINEIAAALLKNPLHVAIG--TAHAEHQDISQRIYLC-DHLDHKEAL 236
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LL+D S K + IIF T+ +++ + G+A + G+ Q R+ ++ +F
Sbjct: 237 LSRLLSDESHK---QVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFA 293
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTG 398
G+ ILV TDVA+RGLD+ +V VINFD P +E+Y+HRIGRTGR+ G
Sbjct: 294 RGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKG 344
Score = 196 (74.1 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 43/116 (37%), Positives = 67/116 (57%)
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
+F + + +L+ +K G PT IQ Q PIA++G +++ ++TGSGKTLA++LPA+
Sbjct: 2 QFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQ 61
Query: 174 HINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ L D P VL+L PTRELA Q+ R ++T ++ V GG + Q
Sbjct: 62 RVISTRALSKRD-PRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQ 116
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 276 (102.2 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 67/171 (39%), Positives = 100/171 (58%)
Query: 232 RQVLMWSATWPR-EVQKLAEDFLDSYIQINIGSLTLSANH-NIQQVVEVCAEH--EKENK 287
RQ LM+SAT E+ ++A L + + + IG T A H +I Q + +C +H KE
Sbjct: 180 RQTLMFSATLDHSEINEIAAALLKNPLHVAIG--TAHAEHQDISQRIYLC-DHLDHKEAL 236
Query: 288 LFGLLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFR 347
L LL+D S K + IIF T+ +++ + G+A + G+ Q R+ ++ +F
Sbjct: 237 LSRLLSDESHK---QVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFA 293
Query: 348 NGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTG 398
G+ ILV TDVA+RGLD+ +V VINFD P +E+Y+HRIGRTGR+ G
Sbjct: 294 RGQQQILVTTDVASRGLDLLNVSLVINFDMPKFAEEYVHRIGRTGRAGAKG 344
Score = 196 (74.1 bits), Expect = 3.2e-40, Sum P(2) = 3.2e-40
Identities = 43/116 (37%), Positives = 67/116 (57%)
Query: 114 EFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIV 173
+F + + +L+ +K G PT IQ Q PIA++G +++ ++TGSGKTLA++LPA+
Sbjct: 2 QFTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQ 61
Query: 174 HINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQ 229
+ L D P VL+L PTRELA Q+ R ++T ++ V GG + Q
Sbjct: 62 RVISTRALSKRD-PRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQ 116
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 429 (156.1 bits), Expect = 3.9e-40, P = 3.9e-40
Identities = 91/204 (44%), Positives = 132/204 (64%)
Query: 228 PQPDRQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK 287
P+ RQ L++SAT+PRE+Q+LA DFL +YI + +G + S + +Q+V E + +K +
Sbjct: 343 PRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRV-EFVLDSDKRSH 401
Query: 288 LFGLL-----NDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYV 342
L LL N I K + T++F ETKR D + + G+ A IHGD++QQER+
Sbjct: 402 LMDLLHAQRENGIQGK-QALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVA 460
Query: 343 LKEFRNGRAGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYT 402
LK F++GR ILVATDVAARGLD+ V V+NFD PN+ +DY+HRIGRTGR+ +G +
Sbjct: 461 LKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATA 520
Query: 403 FFTQQNSRQAKDLIDVLTESNHPV 426
FF N+ A+ L +++ E+N V
Sbjct: 521 FFNDGNTSLARPLAELMQEANQEV 544
Score = 234 (87.4 bits), Expect = 7.8e-17, P = 7.8e-17
Identities = 76/286 (26%), Positives = 136/286 (47%)
Query: 73 PFEKNFFHPSPSVLNRSPHEVQ--AFRDKHQMTLKGNAPNPITEFAEANFPDYVLKEVKR 130
PFE + P P+ + + A+ D T N P P+ FAE + + + ++R
Sbjct: 117 PFENDDSEPEPAFTEQDNTVINFDAYEDIPIETSGDNVPPPVNTFAEIDLGEALNLNIRR 176
Query: 131 QGFDRPTPIQAQGWPIAMSGSNMVGVAQTGSGKTLAYMLPAIVHINHQSQLKPGDG---- 186
+ +PTP+Q PI + G +++ AQTGSGKT A+ P I I ++ G
Sbjct: 177 CKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTV 236
Query: 187 -PIVLVLAPTRELAQQIQEVARDFGSSTYLRSTCVYGGASKGPQP---DRQVLMWSATWP 242
P+ ++L+PTRELA QI + A+ F T ++ YGG Q +R V + AT P
Sbjct: 237 YPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVAT-P 295
Query: 243 REVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENKLFGLLNDISSKDENK 302
+ L E ++++ + A +++++ E + K+ + D+ + +
Sbjct: 296 GRLNDLLER-----ARVSMQMIRFLALDEADRMLDMGFEPQIR-KIVEQM-DMPPRGVRQ 348
Query: 303 TIIFAET-KRKVDKITKS-IQNYGWAAVGIHGDKSQ---QERDYVL 343
T++F+ T R++ ++ + NY + AVG G + Q ++VL
Sbjct: 349 TLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVL 394
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 267 (99.0 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 62/176 (35%), Positives = 99/176 (56%)
Query: 232 RQVLMWSATWPREVQKLAEDFLDSYIQINIGSLTLSANHNIQQVVEVCAEHEKENK-LFG 290
R ++SAT +V+ L L + +++++ S + + +Q +C H+ +N L
Sbjct: 221 RHTYLFSATMSTKVESLQRASLSNPVRVSVSSKYQTVS-TLQSSY-ICIPHKHKNLYLVY 278
Query: 291 LLNDISSKDENKTIIFAETKRKVDKITKSIQNYGWAAVGIHGDKSQQERDYVLKEFRNGR 350
LLN+ + + IIF T + ++ ++ G+ A+ +HG SQ R L +FR+
Sbjct: 279 LLNEFAGQS---AIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRS 335
Query: 351 AGILVATDVAARGLDVDDVKFVINFDYPNNSEDYIHRIGRTGRSDNTGTSYTFFTQ 406
ILVATDVAARGLD+ V V NFD P +S+ YIHR+GRT R+ +G + +F TQ
Sbjct: 336 RDILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQ 391
Score = 212 (79.7 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 47/125 (37%), Positives = 67/125 (53%)
Query: 99 KHQMTLKGNAPNPITEFAEANFPDYVLKEVKRQGFDRPTPIQAQGWPIAMSGSNMVGVAQ 158
K + G P P F E D + + + G+ PTPIQ+Q P+A+ G +++G+A+
Sbjct: 32 KDETQTSGEEPAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAE 91
Query: 159 TGSGKTLAYMLPAIVHINHQSQLKPGDGPIVLVLAPTRELAQQIQEVARDFGSSTYLRST 218
TGSGKT A+ LP + + Q G LVLAPTRELA QI + GS+ +R
Sbjct: 92 TGSGKTAAFALPMLQALMEAPQTLFG-----LVLAPTRELAYQISQAFETLGSTIGVRCA 146
Query: 219 CVYGG 223
+ GG
Sbjct: 147 VIVGG 151
WARNING: HSPs involving 764 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 453 388 0.00093 117 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1014
No. of states in DFA: 617 (66 KB)
Total size of DFA: 252 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 35.97u 0.12s 36.09t Elapsed: 00:00:14
Total cpu time: 36.04u 0.12s 36.16t Elapsed: 00:00:15
Start: Thu Aug 15 15:08:25 2013 End: Thu Aug 15 15:08:40 2013
WARNINGS ISSUED: 2