BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9621
(253 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/253 (63%), Positives = 184/253 (72%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EDKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGEAIARE+G+RFMETSAKANINI++AF ELA AI +KT G++P +APDRVT+D
Sbjct: 134 T----ERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVERN--SNRCC 200
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/253 (63%), Positives = 184/253 (72%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E+ +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EEKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ +GEAIARE+G+RFMETSAKANINI++AF ELA AI DKT GR+P +APDRVT+D
Sbjct: 134 T----EKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGREPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVERN--SNRCC 200
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 310 bits (794), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 161/253 (63%), Positives = 184/253 (72%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EDRRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGEAIARE+G+RFMETSAKANINI++AF ELA AI +KT G++P +APDRVT+D
Sbjct: 134 T----ERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVERN--SNRCC 200
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 309 bits (791), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 184/253 (72%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E+ +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EERRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ +GEAIARE+G+RFMETSAKANINI++AF ELA AI DKT G++P +APDRVT+D
Sbjct: 134 T----EKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKEPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVERS--SNRCC 200
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 308 bits (790), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 184/253 (72%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSD+AF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDEAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EDKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ +GEAIARE+G+RFMETSAKANINI++AF ELA AI DKT G++P +APDRVT+D
Sbjct: 134 T----EKGEAIAREHGIRFMETSAKANINIDQAFSELAEAILDKTHGKEPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVERN--SNRCC 200
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 161/254 (63%), Positives = 180/254 (70%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A D +VV+
Sbjct: 121 GNKCDMA-----------------------------------------------DKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAK+NINIE+AF ELA AI DKT+GR+ E P+RV +D
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTAGRESAENPERVVVD 189
Query: 241 KKPDRGGMA-GGCC 253
++ + A CC
Sbjct: 190 RRNNEKAPAYKSCC 203
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/253 (62%), Positives = 183/253 (72%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EDKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGEAIARE+G+RFMETSAKA+INI++AF EL AI +KT G++P +APDRVT+D
Sbjct: 134 T----ARGEAIAREHGIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVERN--SNRCC 200
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 161/254 (63%), Positives = 178/254 (70%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + D +VV+
Sbjct: 121 GNKCDMS-----------------------------------------------DKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+ +RFMETSAK+NINIE+AF ELA AI DKTSGR+ E P+RV ID
Sbjct: 134 ----KERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENPERVVID 189
Query: 241 K-KPDRGGMAGGCC 253
+ D+ CC
Sbjct: 190 RGNSDKATSYSKCC 203
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 305 bits (781), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 164/254 (64%), Positives = 180/254 (70%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D MG D +VV+
Sbjct: 121 GNKCD------------------MG-----------------------------DKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAK+NINIE+AF ELA AI DKTSGR+ E P+RV ID
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENPERVVID 189
Query: 241 K-KPDRGGMAGGCC 253
+ D+ CC
Sbjct: 190 RANSDKAPGYNKCC 203
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/253 (62%), Positives = 182/253 (71%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+ WLRNIDEHANE+VEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVNWLRNIDEHANENVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED + V+
Sbjct: 121 GNKSDM-----------------------------------------------EDRREVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGEAIARE+G+RFMETSAKANINI++AF ELA AI DKT G++P +APDRVT+D
Sbjct: 134 T----ERGEAIAREHGIRFMETSAKANINIDRAFRELAEAILDKTHGKEPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVER--TSSRCC 200
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 159/253 (62%), Positives = 183/253 (72%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EDKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGEAIARE+G+RFMETSAKA+INI++AF EL AI +KT G++P +APDRVT+D
Sbjct: 134 TG----RGEAIAREHGIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQDAPDRVTVD 189
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 190 RRVERN--SNRCC 200
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 162/254 (63%), Positives = 179/254 (70%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VV+
Sbjct: 121 GNKCDMT-----------------------------------------------DKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAK+NINIE+AF ELA AI DKTSGR+ E P+RV ID
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENPERVVID 189
Query: 241 KK-PDRGGMAGGCC 253
++ D+ CC
Sbjct: 190 RRNNDKAPGYNKCC 203
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 161/254 (63%), Positives = 178/254 (70%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VVN
Sbjct: 121 GNKCDMT-----------------------------------------------DKRVVN 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAK+N NIE+AF ELA AI DKTSG++ E P+RV ID
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKSNTNIERAFCELAEAILDKTSGKEAAENPERVVID 189
Query: 241 KK-PDRGGMAGGCC 253
++ D+ CC
Sbjct: 190 RRNNDKAPGYSKCC 203
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/254 (63%), Positives = 178/254 (70%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VVN
Sbjct: 121 GNKCDMT-----------------------------------------------DKRVVN 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAK+NINIE+AF ELA AI DKTSGR+ E +RV ID
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAENQERVIID 189
Query: 241 KK-PDRGGMAGGCC 253
++ ++ CC
Sbjct: 190 RRNQEKAPGYSKCC 203
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 303 bits (775), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/254 (63%), Positives = 177/254 (69%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VVN
Sbjct: 121 GNKCDMT-----------------------------------------------DKRVVN 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+ +RFMETSAK+NINIE+AF ELA AI DKT+GR+ E P+RV ID
Sbjct: 134 ----KERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTAGRESAENPERVVID 189
Query: 241 K-KPDRGGMAGGCC 253
+ D+ CC
Sbjct: 190 RGNSDKAPGYNKCC 203
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/254 (63%), Positives = 177/254 (69%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VVN
Sbjct: 121 GNKCDMT-----------------------------------------------DKRVVN 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAK+N NIE+AF ELA AI DKTSGR+ E +RV ID
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTSGRESAENQERVIID 189
Query: 241 KK-PDRGGMAGGCC 253
++ D+ CC
Sbjct: 190 RRNNDKAPGYNKCC 203
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 300 bits (769), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 158/253 (62%), Positives = 181/253 (71%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E+ +VV+
Sbjct: 121 GNKSDM-----------------------------------------------EEKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ +GEAIARE+G+RFMETSAKANINI++AF ELA AI DKT G++P +A DRVT++
Sbjct: 134 T----EKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKEPQDAADRVTVN 189
Query: 241 KKPDRGGMAGGCC 253
+R + CC
Sbjct: 190 IPRERN--SNRCC 200
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/253 (61%), Positives = 177/253 (69%), Gaps = 51/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSD+ F TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+FD+I+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E+ +VV+
Sbjct: 121 GNKCDM-----------------------------------------------EEKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAKANINI++AF ELA AI DKT+GR+ R+ ++
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTAGREADADHSRIAVE 189
Query: 241 KKPDRGGMAGGCC 253
++P R + CC
Sbjct: 190 RRPSRAPPSRACC 202
>gi|328779138|ref|XP_003249596.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Apis mellifera]
Length = 192
Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/253 (61%), Positives = 177/253 (69%), Gaps = 61/253 (24%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V+
Sbjct: 121 GNKSDM-----------------------------------------------EDKRVI- 132
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
ARE+G+RFMETSAKANINI++AF ELA AI +KT G++P +APDRVT+D
Sbjct: 133 -----------AREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQDAPDRVTVD 181
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 182 RRVERN--SNRCC 192
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 295 bits (756), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/253 (61%), Positives = 177/253 (69%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNI+EHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNINEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVG 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGE IARE+ + F+ETSAKANINIEKAF +L +I +KT GR+P + P+++ ID
Sbjct: 134 ----KSRGEGIAREHNISFLETSAKANINIEKAFTDLTLSILNKTPGREPTDVPEKINID 189
Query: 241 KKPDRGGMAGGCC 253
+K DR ++ CC
Sbjct: 190 RKSDR--LSNRCC 200
>gi|383848305|ref|XP_003699792.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Megachile
rotundata]
Length = 192
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 155/253 (61%), Positives = 177/253 (69%), Gaps = 61/253 (24%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V+
Sbjct: 121 GNKSDM-----------------------------------------------EDRRVI- 132
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
ARE+G+RFMETSAKANINI++AF ELA AI +KT G++P +APDRVT+D
Sbjct: 133 -----------AREHGIRFMETSAKANINIDRAFSELAEAILEKTHGKEPQDAPDRVTVD 181
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 182 RRVERN--SNRCC 192
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 293 bits (751), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/254 (61%), Positives = 176/254 (69%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKT++L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VV+
Sbjct: 121 GNKCDMT-----------------------------------------------DKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
RGE+IARE+ +RFMETSAKANINIE+AF ELA AI DKTSG++ + PDRV ++
Sbjct: 134 I----ERGESIAREHDIRFMETSAKANINIERAFRELAEAILDKTSGKETTDNPDRVVVN 189
Query: 241 KKP-DRGGMAGGCC 253
+ D+ CC
Sbjct: 190 RGTGDKPPAYKACC 203
>gi|340720309|ref|XP_003398583.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Bombus
terrestris]
Length = 192
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 153/253 (60%), Positives = 176/253 (69%), Gaps = 61/253 (24%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+F+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V+
Sbjct: 121 GNKSDM-----------------------------------------------EDKRVI- 132
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
ARE+G+RFMETSAKA+INI++AF EL AI +KT G++P +APDRVT+D
Sbjct: 133 -----------AREHGIRFMETSAKADINIDRAFNELTEAILEKTHGKEPQDAPDRVTVD 181
Query: 241 KKPDRGGMAGGCC 253
++ +R + CC
Sbjct: 182 RRVERN--SNRCC 192
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 289 bits (739), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/254 (61%), Positives = 173/254 (68%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKT++L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A D+ A
Sbjct: 121 GNKCDMA-----------------------------------------DKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K RGE IARE+ +RFMETSAKAN NIE AF ELA AI DK +G++ + PDRV ++
Sbjct: 132 --VRKERGENIAREHDIRFMETSAKANTNIELAFRELAEAILDKVAGKETTDNPDRVVVN 189
Query: 241 KKP-DRGGMAGGCC 253
+ +R CC
Sbjct: 190 RSTGERLPAYKACC 203
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 286 bits (733), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 156/254 (61%), Positives = 173/254 (68%), Gaps = 54/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK+YD LFKLLLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKT++L+GKKIKL
Sbjct: 1 MAKKSYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDIT+ K+FDNI KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED + V+
Sbjct: 121 GNKCDV-----------------------------------------------EDKRAVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RFMETSAKANINIE AF ELA AI KT GR+ E DRV ++
Sbjct: 134 ----KEKGEMIAREHGIRFMETSAKANINIESAFYELAQAILTKTCGREQAEPLDRVPLE 189
Query: 241 -KKPDRGGMAGGCC 253
+ DR + CC
Sbjct: 190 GSRNDR--QSNRCC 201
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 283 bits (724), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 150/240 (62%), Positives = 169/240 (70%), Gaps = 51/240 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSD+ F TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEK+FD+I+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGEAIARE+G+RFMETSAK+N NIE+AF ELA AI DK++GR+ R+ ++
Sbjct: 134 ----KERGEAIAREHGIRFMETSAKSNTNIERAFSELAEAILDKSAGREAEADLARIAVE 189
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 279 bits (713), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/254 (61%), Positives = 167/254 (65%), Gaps = 56/254 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V
Sbjct: 121 GNKCDM-----------------------------------------------EDKRV-- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K +GE IARE+ +RF ETSAKANINIEKAF+ LA I KT P++ PDR +D
Sbjct: 132 --VLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKT----PVKEPDRENVD 185
Query: 241 KKPDRGGMA-GGCC 253
GG CC
Sbjct: 186 ISTTGGGTGLKKCC 199
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 146/253 (57%), Positives = 168/253 (66%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDIT K+FDNI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +++
Sbjct: 121 GNKCDM-----------------------------------------------EDKRMIP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGE+IARE+G++F+ETSAK+N+N+EKAF+ LA I KT +D PD ++
Sbjct: 134 ----KERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKD--SNPDSSSVS 187
Query: 241 KKPDRGGMAGGCC 253
+ GCC
Sbjct: 188 VHKETSSRKSGCC 200
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGSGVTGWKSKCC 200
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 277 bits (708), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGSGVTGWKSKCC 200
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 150/253 (59%), Positives = 167/253 (66%), Gaps = 55/253 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKTV+L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN K+FDNI KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + +
Sbjct: 121 GNKCDIEDKRQ------------------------------------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K RGE+IARE+G+ F+ETSAK+N+N+EKAF++LA AI +KT +D V I
Sbjct: 132 --VPKQRGESIAREHGIPFLETSAKSNVNVEKAFMDLAQAILNKTPSKDADGHNKAVDIH 189
Query: 241 KKPDRGGMAGGCC 253
K + G CC
Sbjct: 190 KSESK----GRCC 198
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 154/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 146/253 (57%), Positives = 170/253 (67%), Gaps = 54/253 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK+YD+LFKLLLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKT++++GKKIKL
Sbjct: 1 MAKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDIT EK+FDNI KWLRNI+EHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D ++V+
Sbjct: 121 GNKCDM-----------------------------------------------DDRRIVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IARE+G+RF+ETSAK NINIE+AF LA I K +D E + + +
Sbjct: 134 ----RERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEPSNNIHVH 189
Query: 241 KKPDRGGMAGGCC 253
+ D+ GGCC
Sbjct: 190 DQKDK---KGGCC 199
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKAN+NIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANVNIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDI+N KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDISNTKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISTGGGVTGWKSKCC 200
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 171/255 (67%), Gaps = 58/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L GK+IKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGI+LVYDITN KSF+NI KWLRNI+EHANEDVEKM+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHANEDVEKMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKCDM-----------------------------------------------EDVRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IA E+ +RF ETSAKANINIEKAF+ LA I KT G++P + V ++
Sbjct: 134 ----KAKGEQIASEHNIRFFETSAKANINIEKAFLTLAEDILHKTPGKEP--TNENVDVN 187
Query: 241 KKPDRGGMAGG--CC 253
+R G +GG CC
Sbjct: 188 ---NRSGSSGGVRCC 199
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/254 (59%), Positives = 172/254 (67%), Gaps = 55/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLR IDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED ++++
Sbjct: 121 GNKCDM-----------------------------------------------EDKRLIS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
+ RGEA+A ++ +RFMETSAK N+NIE+AF ELA AI +K +G+D E DR+ +
Sbjct: 134 ----RERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQMAGKDQAENQDRLKV 189
Query: 240 DKKPDRGGMAGGCC 253
P++ M CC
Sbjct: 190 -LPPEKKVM--NCC 200
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANI+IEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANISIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISGGSGVTGWKSKCC 200
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/254 (59%), Positives = 172/254 (67%), Gaps = 55/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLR IDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED ++++
Sbjct: 121 GNKCDM-----------------------------------------------EDKRLIS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
+ RGEA+A ++ +RFMETSAK N+NIE+AF ELA AI +K +G+D E DR+ +
Sbjct: 134 ----RERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQMAGKDQAENQDRLRV 189
Query: 240 DKKPDRGGMAGGCC 253
P++ M CC
Sbjct: 190 -LPPEKKVM--NCC 200
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/256 (60%), Positives = 170/256 (66%), Gaps = 59/256 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IA+E+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKT----PVKEPNSENVD 185
Query: 241 KKPDRGGMAG---GCC 253
GG+ G CC
Sbjct: 186 ISTG-GGVTGWKTKCC 200
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 167/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGID KIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKAN++IEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANVSIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISGGSGVTGWKSKCC 200
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KSKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 273 bits (697), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/255 (58%), Positives = 170/255 (66%), Gaps = 58/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L GK+IKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGI+LVYDITN KSF+NI KWLRNI+EHANEDVEKM+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKWLRNIEEHANEDVEKMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 121 GNKCDM-----------------------------------------------EDVRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE I E+ +RF ETSAKANINIEKAF+ LA + KT G++P + V ++
Sbjct: 134 ----KAKGEQIVSEHNIRFFETSAKANINIEKAFLTLAEDVLHKTPGKEP--TNENVDVN 187
Query: 241 KKPDRGGMAGG--CC 253
+R G +GG CC
Sbjct: 188 ---NRSGSSGGVRCC 199
>gi|442756017|gb|JAA70168.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 200
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/254 (59%), Positives = 171/254 (67%), Gaps = 55/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLR IDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNSKSFDNIAKWLRYIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED ++V+
Sbjct: 121 GNKCDM-----------------------------------------------EDKRLVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
+ RG A+A ++G+RFMETSAK N+NIE AF ELA AI +K +G+D E DR+ +
Sbjct: 134 ----RERGNAVAIDHGIRFMETSAKTNVNIEFAFTELAEAILNKQMAGKDLAENQDRLRV 189
Query: 240 DKKPDRGGMAGGCC 253
P++ M CC
Sbjct: 190 -LPPEKRVM--NCC 200
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 167/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGD GVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDXGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V
Sbjct: 121 GNKCDM-----------------------------------------------EDKRV-- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K +GE IA+E+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 132 --VLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 FTSGGGVTGWKSKCC 200
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 T----GKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANED+E+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDMERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IA+E+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAK+TYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKETYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 167/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAK NINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/253 (58%), Positives = 164/253 (64%), Gaps = 52/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKTV+L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHANEDVE+M++
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISKWLRNIDEHANEDVERMLI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED ++V
Sbjct: 121 GNKCDM-----------------------------------------------EDKRIVG 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IA+E+G+RF ETSAKANINIEKAF+ LA I KT +D V +
Sbjct: 134 T----DRGENIAKEHGIRFFETSAKANINIEKAFMTLAEDILRKTPSKDSGPEAGSVAVG 189
Query: 241 KKPDRGGMAGGCC 253
+ G CC
Sbjct: 190 RDQS-SGFKPRCC 201
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 270 bits (691), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLR+IDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRHIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/255 (59%), Positives = 170/255 (66%), Gaps = 56/255 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MAKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDVEKM+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVEKMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A D +VV+
Sbjct: 121 GNKCDMA-----------------------------------------------DRRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IA ++G+RF+ETSAKANI I+KAF +LA AI DK ++ E + TI
Sbjct: 134 ----RERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPNKE--ENAKQPTI- 186
Query: 241 KKPDRGGMAG--GCC 253
+ D G G GCC
Sbjct: 187 RPVDSGASTGRVGCC 201
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 270 bits (689), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 167/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +G IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 269 bits (688), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/252 (57%), Positives = 167/252 (66%), Gaps = 55/252 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK+YD LFKLLLIGDSGVGKTC+LFRFS+D FNTTFISTIGIDFKIKT DL+GKKIKL
Sbjct: 1 MAKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFDLRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYR AMGIMLVYD+TN KSFDNI KWLRNI EHA E+V+KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLRNIQEHAAEEVDKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V++
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVIS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GEAI+REYG+RF+ETSAK N+NIE+AFIELA +I D+T G +E P R ++
Sbjct: 134 ----KEKGEAISREYGIRFLETSAKTNVNIERAFIELAESILDRTPG---IEEP-RPSLP 185
Query: 241 KKPDRGGMAGGC 252
G GC
Sbjct: 186 PPNVSGQPKCGC 197
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/255 (58%), Positives = 171/255 (67%), Gaps = 54/255 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKT++L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELHGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN++SF+NI KWLR IDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAKWLRYIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E +V++
Sbjct: 121 GNKCDM-----------------------------------------------ELKRVIS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-TSGRDPLEAPDRVTI 239
K +GEAIAR++ + F+ETSAKANINIE+AF +LA AI K TSGR ++A I
Sbjct: 134 ----KDKGEAIARDHNISFLETSAKANINIEEAFTQLAEAILQKQTSGR-AVDAATSGGI 188
Query: 240 DKKP-DRGGMAGGCC 253
+ P +R + CC
Sbjct: 189 NVGPRERPALGANCC 203
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/254 (57%), Positives = 169/254 (66%), Gaps = 54/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA++ YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDV KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + D +VV+
Sbjct: 121 GNKCDMS-----------------------------------------------DRRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IA+++G+RF ETSAK N++++ AF +LA AI K D E R T++
Sbjct: 134 ----RERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMP--DSTEEQSRDTVN 187
Query: 241 K-KPDRGGMAGGCC 253
+P R G +GGCC
Sbjct: 188 PVQPQRTGGSGGCC 201
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/227 (63%), Positives = 157/227 (69%), Gaps = 51/227 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +V
Sbjct: 121 GNKCDM-----------------------------------------------DDKRV-- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
V K +GE IARE+G+RF ETSAKANINIEKAF+ LA I K +
Sbjct: 132 --VPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKVTA 176
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/255 (58%), Positives = 166/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAF+TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWL NIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKAN NIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 170/256 (66%), Gaps = 56/256 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MAKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDVEKM+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVEKMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A ER +VV+
Sbjct: 121 GNKCDMA--ER---------------------------------------------RVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IA ++G+RF+ETSAKANI I+KAF +LA AI DK ++ E + TI
Sbjct: 134 ----RERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKN--EGMKQPTIR 187
Query: 241 KKPDRGGMAGG---CC 253
+ +A G CC
Sbjct: 188 PAEPQSNVAIGRLSCC 203
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/254 (57%), Positives = 169/254 (66%), Gaps = 54/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA++ YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDV KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + D +VV+
Sbjct: 121 GNKCDMS-----------------------------------------------DRRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGE IA+++G+RF ETSAK N++++ AF +LA AI K D + R TI+
Sbjct: 134 ----KDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMP--DSTDEQSRDTIN 187
Query: 241 K-KPDRGGMAGGCC 253
+P R G +GGCC
Sbjct: 188 PVQPQRPGGSGGCC 201
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 149/254 (58%), Positives = 166/254 (65%), Gaps = 55/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDD F+TTFISTIGIDFKIKTV+L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDIT EK+FDNI KWLRNI EHANEDVEKM+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHANEDVEKMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +++N
Sbjct: 121 GNKCDM-----------------------------------------------DDKRMIN 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGE IA+E G++FMETSAKANIN+E+AF+ LA I K RD +P V D
Sbjct: 134 ----KDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDT-GSPGVVKPD 188
Query: 241 KKPDRGGMAGG-CC 253
K G +G CC
Sbjct: 189 MK--EGSSSGSKCC 200
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/256 (58%), Positives = 170/256 (66%), Gaps = 56/256 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 24 MAKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 83
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDVEKM+L
Sbjct: 84 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVEKMLL 143
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A ER +VV+
Sbjct: 144 GNKCDMA--ER---------------------------------------------RVVS 156
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IA ++G+RF+ETSAKANI I+KAF +LA AI DK ++ E + TI
Sbjct: 157 ----RERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKN--EGMKQPTIR 210
Query: 241 KKPDRGGMAGG---CC 253
+ +A G CC
Sbjct: 211 PAEPQNNVAIGRLSCC 226
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 143/253 (56%), Positives = 167/253 (66%), Gaps = 52/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA++ YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDV KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + D +VV+
Sbjct: 121 GNKCDMS-----------------------------------------------DRRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IA+++G+RF ETSAK N++++ AF +LA AI K ++ D V
Sbjct: 134 ----RERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPESTDEQSRDTVN-P 188
Query: 241 KKPDRGGMAGGCC 253
+P R G +GGCC
Sbjct: 189 VQPQRPGSSGGCC 201
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 264 bits (674), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 141/252 (55%), Positives = 167/252 (66%), Gaps = 55/252 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK+YD LFKLLLIGDSGVGKTC+LFRFS+D FNTTFISTIGIDFKIKT +L+GKKIKL
Sbjct: 1 MAKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYR AMGIMLVYD+TN KSFDNI KWL+NI EHA E+V+KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAKWLQNIQEHAAEEVDKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V++
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVIS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GEAI+REYG+RF+ETSAK N+NIE+AF++LA +I ++T G +E P R ++
Sbjct: 134 ----KEKGEAISREYGIRFLETSAKTNVNIERAFMDLAESILERTPG---VEEP-RPSLP 185
Query: 241 KKPDRGGMAGGC 252
G GC
Sbjct: 186 PPNSSGQPKCGC 197
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 142/254 (55%), Positives = 167/254 (65%), Gaps = 54/254 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA++ YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDV KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + D +VV+
Sbjct: 121 GNKCDMS-----------------------------------------------DRRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ RGE IA+++G+ F ETSAK N++++ AF +LA AI K D + R T++
Sbjct: 134 ----RERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMP--DSTDEQSRDTVN 187
Query: 241 K-KPDRGGMAGGCC 253
+P R +GGCC
Sbjct: 188 PVQPQRQSSSGGCC 201
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/253 (58%), Positives = 163/253 (64%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAF+TTFISTIGIDFKIKTV+L+ KKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQEKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWL NIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLGNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKFDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKAN NIEKAF+ LA I KT ++P + V I
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKTPVKEP--NSENVDIS 187
Query: 241 KKPDRGGMAGGCC 253
G CC
Sbjct: 188 SGGSVTGWKSKCC 200
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 261 bits (668), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 145/253 (57%), Positives = 164/253 (64%), Gaps = 54/253 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGA GIMLVYDITN KSF+NI KWLRNI+EHA+EDVEKM+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGANGIMLVYDITNTKSFENISKWLRNIEEHASEDVEKMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED ++++
Sbjct: 121 GNKCDM-----------------------------------------------EDKRMIS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RGE IA+E+G++F ETSAK NINIE AFI LAT I KT ++ V +
Sbjct: 134 ----KERGEMIAKEHGIKFYETSAKNNINIETAFIALATDILHKTPVKETGAGSAGVDVT 189
Query: 241 KKPDRGGMAGGCC 253
++ + CC
Sbjct: 190 QQRQS---SRSCC 199
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 260 bits (664), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 141/253 (55%), Positives = 166/253 (65%), Gaps = 54/253 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A++ YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKLQ
Sbjct: 1 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 60
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDV KMILG
Sbjct: 61 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMILG 120
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D + D +VV+
Sbjct: 121 NKCDMS-----------------------------------------------DRRVVS- 132
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+ RGE IA+++G+ F ETSAK N++++ AF +LA AI K D + R T++
Sbjct: 133 ---RERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMP--DSTDEQSRDTVNP 187
Query: 242 -KPDRGGMAGGCC 253
+P R +GGCC
Sbjct: 188 VQPQRQSSSGGCC 200
>gi|464553|sp|P35281.1|RAB10_RAT RecName: Full=Ras-related protein Rab-10
gi|455344|gb|AAA41991.1| RAB10 [Rattus norvegicus]
Length = 200
Score = 259 bits (663), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 147/255 (57%), Positives = 162/255 (63%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTI IDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNID+HANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
D +H P
Sbjct: 121 RNKCDM-------------------------------------------DHKRVVP---- 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+ +RF ETSAKANINIEKAF+ L I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/225 (60%), Positives = 157/225 (69%), Gaps = 51/225 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MAKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTIT SYYRGAMGIMLVYDITN+KSF+NI KWLRNI+EHA+EDVEKM+L
Sbjct: 61 QIWDTAGQERFHTITMSYYRGAMGIMLVYDITNQKSFENITKWLRNIEEHASEDVEKMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E+ ++V+
Sbjct: 121 GNKCDI-----------------------------------------------EEKRMVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT 225
K RGE IA ++G+RF+ETSAKA INI+KAF +LA AI +K
Sbjct: 134 ----KERGEEIAGKHGIRFLETSAKAKINIDKAFYDLAEAILNKV 174
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 137/255 (53%), Positives = 163/255 (63%), Gaps = 55/255 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+KKTYD LFK+LLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKT++L+GKKIKL
Sbjct: 1 MSKKTYDLLFKILLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYD+T KSF+NI KW+RNIDEHA++DVEK+IL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINKWIRNIDEHASKDVEKIIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A +
Sbjct: 121 GNKVDEADKRE------------------------------------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K E +AR + +RFMETSAK NINI+ AF+ LA I +K G+ +A + ++I
Sbjct: 132 --VLKSEAEELARIHSIRFMETSAKTNINIDAAFLGLANDILNKMPGKRS-QASETISIQ 188
Query: 241 --KKPDRGGMAGGCC 253
+P+ GCC
Sbjct: 189 NHSRPN-SNQKRGCC 202
>gi|432856212|ref|XP_004068408.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 206
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 136/246 (55%), Positives = 159/246 (64%), Gaps = 55/246 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRF+DDAFN+TFISTIGIDFKI+T+DL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFADDAFNSTFISTIGIDFKIRTIDLNGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVE+M+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDRRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A EYG++FMETSAKANIN+E AF+ LA I K G +P + V I
Sbjct: 132 SKERGEQLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGNNPQGSNQGVKI 191
Query: 240 DKKPDR 245
++P +
Sbjct: 192 TEQPKK 197
>gi|344283149|ref|XP_003413335.1| PREDICTED: ras-related protein Rab-8A-like [Loxodonta africana]
Length = 223
Score = 250 bits (639), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 135/254 (53%), Positives = 158/254 (62%), Gaps = 60/254 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDVNDKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT---------SGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K R P+ P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLLEAPWPARPPVWTP 191
Query: 235 DRVTIDKKPDRGGM 248
D + + + R G+
Sbjct: 192 DALHLHPESSRPGI 205
>gi|410921404|ref|XP_003974173.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 206
Score = 249 bits (637), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 136/246 (55%), Positives = 160/246 (65%), Gaps = 55/246 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A +YG++FMETSAKANIN+E+AF+ LA I K G +P + V I
Sbjct: 132 SKDRGEKLALDYGIKFMETSAKANINVEEAFLTLARDIKAKMDKKLEGNNPQGSSQGVKI 191
Query: 240 DKKPDR 245
++P +
Sbjct: 192 TEQPKK 197
>gi|348504692|ref|XP_003439895.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 249 bits (636), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 159/246 (64%), Gaps = 55/246 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVE+M+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVERMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A EYG++FMETSAKANIN+E AF+ LA I K G +P + V I
Sbjct: 132 SKERGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDKKLEGNNPQGSNQGVKI 191
Query: 240 DKKPDR 245
++P +
Sbjct: 192 TEQPKK 197
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CD----------------------------------------------VNEKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K +GE +A EYG++FMETSAKANIN+E AF LA I K R +P
Sbjct: 132 SKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDIKAKMDKRMEGNSP 182
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/254 (54%), Positives = 160/254 (62%), Gaps = 56/254 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYDFLFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI KW+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKKWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D ED + V
Sbjct: 123 CDM-----------------------------------------------EDRRTVT--- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-----SGRDPLEAPDRVT 238
K RGE +A EYG++FMETSAKA++N+E+AFI LA I K S +P +V
Sbjct: 133 -KERGEQLAIEYGIKFMETSAKASVNVEEAFITLARDIKGKMDKKMESSPNPRNQGVKVV 191
Query: 239 IDKKPDRGGMAGGC 252
+ G + C
Sbjct: 192 DTQSKKSSGFSWKC 205
>gi|218511593|gb|ACK77788.1| RAB8A [Cyprinus carpio]
Length = 207
Score = 249 bits (636), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/240 (57%), Positives = 155/240 (64%), Gaps = 55/240 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CDI----------------------------------------------NEKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT----SGRDPLEAPDRVTI 239
K RGE +A EYG++FMETSAKANIN+E +F+ LA I K G +P + V I
Sbjct: 132 SKDRGEKLALEYGIKFMETSAKANINVENSFLTLARDIKSKMDTKLEGNNPQSSNHGVKI 191
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 1 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 60
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKM+LG
Sbjct: 61 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMVLGNK 120
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 121 CD----------------------------------------------VNEKRQ-----V 129
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K +GE +A EYG++FMETSAKANIN+E AF LA I K R +P
Sbjct: 130 SKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDIKAKMDKRMEGNSP 180
>gi|148237538|ref|NP_001083031.1| ras-related protein Rab-8A [Danio rerio]
gi|133778680|gb|AAI34060.1| Rab8a protein [Danio rerio]
Length = 207
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/231 (58%), Positives = 152/231 (65%), Gaps = 55/231 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CDI----------------------------------------------NEKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDP 230
K RGE +A EYG++FMETSAKANIN+E AF+ LA I K G +P
Sbjct: 132 SKDRGEKLALEYGIKFMETSAKANINVENAFLTLARDIKAKMDTKLEGNNP 182
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 152/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD+LFKLLLIGDSGVGKTCVLFRFSDDAFN TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KAYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+T +K+F+NI W+RNI++HA+EDVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKNWIRNIEQHASEDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D +VV
Sbjct: 123 CDV-----------------------------------------------DDKRVVT--- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +AREY VRF ETSAKANIN+E+AF+ +A I K + P AP
Sbjct: 133 -KERGEQLAREYNVRFFETSAKANINVEEAFLTIARDIKKKIDSKAPGGAP 182
>gi|197101924|ref|NP_001127003.1| ras-related protein Rab-8A [Pongo abelii]
gi|75070428|sp|Q5R4A3.1|RAB8A_PONAB RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|55733469|emb|CAH93413.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 152/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+D N+ Q V
Sbjct: 123 RD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 137/249 (55%), Positives = 157/249 (63%), Gaps = 52/249 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDV----------------------------------------------NDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE +A +YG++FMETSAKANIN+E AF LA I K + AP VT + K
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD-KKLATAPRGVTRESKS 190
Query: 244 DRGGMAGGC 252
+ G
Sbjct: 191 HQTSRRGAA 199
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 141/253 (55%), Positives = 160/253 (63%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YD+LFKLLLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKTV++ GKKIKL
Sbjct: 1 MAKKAYDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDIT EK+FDNI KWLRNIDEHA+E VE+MIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIDEHASEGVERMIL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D N+K
Sbjct: 121 GNKCD---------------------------MNDKRM---------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-TSGRDPLEAPDRVTI 239
K +GE IARE+ ++F ETSAK NI +E+AF+ L I K +G +A V I
Sbjct: 132 --ASKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLTQDILRKHQAGATQDQATTGVVI 189
Query: 240 DKKPDRGGMAGGC 252
K+ +R A C
Sbjct: 190 PKE-NRAKPANCC 201
>gi|348556994|ref|XP_003464305.1| PREDICTED: ras-related protein Rab-8A-like [Cavia porcellus]
Length = 207
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 155/246 (63%), Gaps = 55/246 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A +YG++FMETSAKANIN+E AF LA I K G P + V I
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSQGVKI 191
Query: 240 DKKPDR 245
P +
Sbjct: 192 TPDPQK 197
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 19 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 78
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKM+LG
Sbjct: 79 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNK 138
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 139 CDI----------------------------------------------NDKRQ-----V 147
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++FMETSAKANIN+E AF+ LA I K
Sbjct: 148 SKDRGEQLALDYGIKFMETSAKANINVENAFLTLARDIKSK 188
>gi|334326972|ref|XP_001368638.2| PREDICTED: ras-related protein Rab-8A-like [Monodelphis domestica]
Length = 207
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CD----------------------------------------------VNERRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/255 (53%), Positives = 158/255 (61%), Gaps = 56/255 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYDFLFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+DL GKKIKLQIW
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEDRRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-----VT 238
+ RGE +A EYGV+FMETSAK++IN+E+AF L I K + L +P + VT
Sbjct: 132 SRDRGEKLAIEYGVKFMETSAKSSINVEEAFFTLGRDIKAKMDKKLDLNSPQKGGNVQVT 191
Query: 239 IDKKPDRGGMAGGCC 253
K +G C
Sbjct: 192 AAKPQKSSPFSGWKC 206
>gi|234746|gb|AAB19681.1| RAS-related protein MEL [Homo sapiens]
Length = 206
Score = 246 bits (627), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 133/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + AP
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKWKATAP 182
>gi|74152890|dbj|BAE27741.1| unnamed protein product [Mus musculus]
Length = 208
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/256 (53%), Positives = 161/256 (62%), Gaps = 59/256 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD------RV 237
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P ++
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKI 191
Query: 238 TIDKKPDRGGMAGGCC 253
T+D+ + M G C
Sbjct: 192 TVDRFHGQSRM--GVC 205
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/181 (70%), Positives = 145/181 (80%), Gaps = 7/181 (3%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF TTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMIL 120
Query: 121 GKTKD-----TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
G D T +ER TI + M +I +K+F+++ + + +D+ A +
Sbjct: 121 GNKCDMSDKRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAI--LDKTAGRE 178
Query: 176 P 176
P
Sbjct: 179 P 179
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/139 (66%), Positives = 107/139 (76%), Gaps = 11/139 (7%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEHANED + +
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHANEDVEKMILGNK 123
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGE IARE+G+RFMETSAKANINI+KAF +LA AI DKT+GR+P +
Sbjct: 124 CDMSDKRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAILDKTAGREPGDHV 183
Query: 235 DRVTIDKKPDRGGMAGGCC 253
DRV +D+K + + CC
Sbjct: 184 DRVLVDRKQ-QSNTSRSCC 201
>gi|390478683|ref|XP_003735553.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Callithrix
jacchus]
Length = 207
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/246 (55%), Positives = 157/246 (63%), Gaps = 57/246 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A +YG++FMETSAKANIN+E AF LA I K +G P + V I
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLAGNSPQGSNQGVKI 191
Query: 240 DKKPDR 245
PD+
Sbjct: 192 --TPDQ 195
>gi|410950754|ref|XP_003982068.1| PREDICTED: ras-related protein Rab-8A [Felis catus]
Length = 207
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/246 (55%), Positives = 156/246 (63%), Gaps = 57/246 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A +YG++FMETSAKANIN+E AF LA I K G P + V I
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSQGVKI 191
Query: 240 DKKPDR 245
PD+
Sbjct: 192 --TPDQ 195
>gi|38372905|ref|NP_075615.2| ras-related protein Rab-8A [Mus musculus]
gi|162287395|ref|NP_446450.2| ras-related protein Rab-8A [Rattus norvegicus]
gi|354473828|ref|XP_003499134.1| PREDICTED: ras-related protein Rab-8A-like [Cricetulus griseus]
gi|82592519|sp|P55258.2|RAB8A_MOUSE RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|82592520|sp|P35280.2|RAB8A_RAT RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|18043409|gb|AAH19990.1| RAB8A, member RAS oncogene family [Mus musculus]
gi|26344994|dbj|BAC36146.1| unnamed protein product [Mus musculus]
gi|26347909|dbj|BAC37603.1| unnamed protein product [Mus musculus]
gi|26348727|dbj|BAC38003.1| unnamed protein product [Mus musculus]
gi|77748034|gb|AAI05864.1| Rab8a protein [Rattus norvegicus]
gi|112292969|dbj|BAF02862.1| Rab8A [Mus musculus]
gi|148678837|gb|EDL10784.1| RAB8A, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149036165|gb|EDL90831.1| RAB8A, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|338855122|gb|AEJ31940.1| RAB8 [Rattus norvegicus]
Length = 207
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|49522647|gb|AAH71176.1| Rab8a protein, partial [Rattus norvegicus]
Length = 206
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 2 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 61
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 62 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 121
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 122 CD----------------------------------------------VNDKRQ-----V 130
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 131 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 181
>gi|344239738|gb|EGV95841.1| Protein FAM59B [Cricetulus griseus]
Length = 826
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 114/125 (91%), Positives = 119/125 (95%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKD 125
G D
Sbjct: 121 GNKCD 125
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/51 (94%), Positives = 49/51 (96%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
DTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANED
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANED 114
>gi|30585389|gb|AAP36967.1| Homo sapiens mel transforming oncogene (derived from cell line
NK14)- RAB8 homolog [synthetic construct]
gi|61373064|gb|AAX43969.1| RAB8A member RAS oncogene family [synthetic construct]
gi|61373066|gb|AAX43970.1| RAB8A member RAS oncogene family [synthetic construct]
Length = 208
Score = 245 bits (625), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|16933567|ref|NP_005361.2| ras-related protein Rab-8A [Homo sapiens]
gi|55741707|ref|NP_001003152.1| ras-related protein Rab-8A [Canis lupus familiaris]
gi|345090993|ref|NP_001230731.1| RAB8A, member RAS oncogene family [Sus scrofa]
gi|194223710|ref|XP_001914834.1| PREDICTED: ras-related protein Rab-8A-like [Equus caballus]
gi|402904630|ref|XP_003915145.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Papio anubis]
gi|403303362|ref|XP_003942297.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Saimiri
boliviensis boliviensis]
gi|426387629|ref|XP_004060266.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Gorilla gorilla
gorilla]
gi|46577633|sp|P61007.1|RAB8A_CANFA RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|46810392|sp|P61006.1|RAB8A_HUMAN RecName: Full=Ras-related protein Rab-8A; AltName: Full=Oncogene
c-mel; Flags: Precursor
gi|75076100|sp|Q4R5P1.1|RAB8A_MACFA RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|20379062|gb|AAM21091.1|AF498943_1 small GTP binding protein RAB8 [Homo sapiens]
gi|452318|emb|CAA40065.1| rab8 small GTP binding protein [Homo sapiens]
gi|6006436|emb|CAB56776.1| rab8 [Canis lupus familiaris]
gi|12804237|gb|AAH02977.1| RAB8A, member RAS oncogene family [Homo sapiens]
gi|30583207|gb|AAP35848.1| mel transforming oncogene (derived from cell line NK14)- RAB8
homolog [Homo sapiens]
gi|49168650|emb|CAG38820.1| RAB8A [Homo sapiens]
gi|49457542|emb|CAG47070.1| RAB8A [Homo sapiens]
gi|60655631|gb|AAX32379.1| RAB8A [synthetic construct]
gi|67970483|dbj|BAE01584.1| unnamed protein product [Macaca fascicularis]
gi|119604932|gb|EAW84526.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119604933|gb|EAW84527.1| RAB8A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123983416|gb|ABM83449.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|123998119|gb|ABM86661.1| RAB8A, member RAS oncogene family [synthetic construct]
gi|355703272|gb|EHH29763.1| Oncogene c-mel [Macaca mulatta]
gi|355755572|gb|EHH59319.1| Oncogene c-mel [Macaca fascicularis]
gi|380785255|gb|AFE64503.1| ras-related protein Rab-8A [Macaca mulatta]
gi|383409677|gb|AFH28052.1| ras-related protein Rab-8A [Macaca mulatta]
gi|384944060|gb|AFI35635.1| ras-related protein Rab-8A [Macaca mulatta]
gi|740474|prf||2005309A rab8 GTPase
Length = 207
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|431921946|gb|ELK19119.1| Ras-related protein Rab-8A [Pteropus alecto]
Length = 207
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 6 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 65
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKM+LG
Sbjct: 66 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVEKMVLGNK 125
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ QV
Sbjct: 126 CDI----------------------------------------------NDKRQVT---- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K GE +A EYG++FMETSAK+NIN+E AF+ LA I K + AP
Sbjct: 136 -KMGGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKTKMDSKLEGNAP 185
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 130/221 (58%), Positives = 151/221 (68%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYDFLFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D + V+
Sbjct: 123 CDM-----------------------------------------------DDRRAVS--- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K +GE +A EYG++FMETSAKA+IN+E+AF+ LA I K
Sbjct: 133 -KEKGEQLAIEYGIKFMETSAKASINVEEAFVTLARDIKSK 172
>gi|334688829|ref|NP_001229300.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|397484920|ref|XP_003813613.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Pan paniscus]
gi|343961933|dbj|BAK62554.1| ras-related protein Rab-8A [Pan troglodytes]
gi|410222044|gb|JAA08241.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410266796|gb|JAA21364.1| RAB8A, member RAS oncogene family [Pan troglodytes]
gi|410342733|gb|JAA40313.1| RAB8A, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/253 (53%), Positives = 158/253 (62%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L+GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELEGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIRTWIRNIEEHASNDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDM----------------------------------------------NDRRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVT---ID 240
K +GEA+A EYGV+F+ETSAKA+IN+E+ FI LA I K + P T +
Sbjct: 132 SKEKGEALAVEYGVKFLETSAKASINVEEGFISLARDIKAKMDRKLEASNPSNRTAHQLK 191
Query: 241 KKPDRGGMAGGCC 253
+P + C
Sbjct: 192 NEPSKKSRKWSCA 204
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/248 (53%), Positives = 156/248 (62%), Gaps = 55/248 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L KKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDNKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDI----------------------------------------------NDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT----SGRDPLEAPDRVTI 239
K RGE +A EYG++FMETSAKANIN+E +F+ LA I K G P + +V I
Sbjct: 132 SKDRGEKLALEYGIKFMETSAKANINVENSFLTLARDIKSKMDTKLEGSSPQGSSHKVKI 191
Query: 240 DKKPDRGG 247
+ +
Sbjct: 192 SQPQKKSS 199
>gi|157428086|ref|NP_001098951.1| ras-related protein Rab-8A [Bos taurus]
gi|240849277|ref|NP_001155332.1| ras-related protein Rab-8A [Ovis aries]
gi|158513560|sp|A4FV54.1|RAB8A_BOVIN RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|133778133|gb|AAI23756.1| RAB8A protein [Bos taurus]
gi|238566720|gb|ACR46623.1| RAB8A [Ovis aries]
gi|296486043|tpg|DAA28156.1| TPA: ras-related protein Rab-8A [Bos taurus]
gi|385139591|gb|AFI41879.1| RAS oncogene protein [Capra hircus]
gi|440901306|gb|ELR52280.1| Ras-related protein Rab-8A [Bos grunniens mutus]
Length = 207
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSP 182
>gi|2118463|pir||I78851 GTP-binding protein MEL - mouse
gi|234748|gb|AAB19682.1| RAS-related [Mus sp.]
Length = 206
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++FMETSAKANIN+E AF LA I K
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>gi|351712945|gb|EHB15864.1| Ras-related protein Rab-8A [Heterocephalus glaber]
Length = 207
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+ RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SRERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|300124329|gb|ADJ68051.1| Rab protein [Larimichthys crocea]
Length = 207
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 134/240 (55%), Positives = 154/240 (64%), Gaps = 55/240 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+ FKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYWFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+M+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVERMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A EYG++FMETSAKANIN+E AF+ LA I K G +P + V I
Sbjct: 132 SKDRGEKLALEYGIKFMETSAKANINVENAFLHLARDIKAKMDKKLEGNNPQGSSQGVKI 191
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 148/218 (67%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYDFLFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSF+NI W+RNI+EHA++DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHASQDVEKMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEDRRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
K RGE +A EYG++FMETSAKA+IN+E+AF LA I
Sbjct: 132 SKERGEQLAVEYGIKFMETSAKASINVEEAFFTLARDI 169
>gi|93279750|pdb|2FU5|C Chain C, Structure Of Rab8 In Complex With Mss4
gi|93279751|pdb|2FU5|D Chain D, Structure Of Rab8 In Complex With Mss4
Length = 183
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/221 (59%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDV----------------------------------------------NDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++FMETSAKANIN+E AF LA I K
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 172
>gi|444726573|gb|ELW67098.1| Ras-related protein Rab-8A [Tupaia chinensis]
Length = 229
Score = 243 bits (621), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 134/231 (58%), Positives = 159/231 (68%), Gaps = 29/231 (12%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + S RG + L Y I + ++ A + V
Sbjct: 123 CDVNDKRQ-----VSKERGE-KLALDYGI-------------KFMETSAKANINV----- 158
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
E +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 159 -----ENLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 204
>gi|301753801|ref|XP_002912748.1| PREDICTED: ras-related protein Rab-8A-like [Ailuropoda melanoleuca]
gi|281343489|gb|EFB19073.1| hypothetical protein PANDA_000488 [Ailuropoda melanoleuca]
Length = 207
Score = 243 bits (620), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 131/231 (56%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RG+ +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGKKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 134/247 (54%), Positives = 155/247 (62%), Gaps = 57/247 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDINDRRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K +GE +A EYG++FMETSAK++IN+E+AF LA I K R P R
Sbjct: 132 TKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEASNPPR------Q 185
Query: 244 DRGGMAG 250
DRG G
Sbjct: 186 DRGHQLG 192
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 243 bits (619), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASADVEKMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDI----------------------------------------------NDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K GE +A EYG++FMETSAK+NIN+E AF+ LA I K
Sbjct: 132 SKEMGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKSK 172
>gi|131848|sp|P22128.1|RAB8_DISOM RecName: Full=Ras-related protein Rab-8; AltName: Full=ORA2; Flags:
Precursor
gi|213119|gb|AAA49232.1| GTP-binding protein [Discopyge ommata]
Length = 210
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/238 (55%), Positives = 156/238 (65%), Gaps = 55/238 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+TV+L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIM VYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CD----------------------------------------------MNEKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELA----TAIYDKTSGRDPLEAPDRV 237
K RGE +A +YG++F+ETSAK++IN+E+AFI LA T + K + EA D++
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKL 189
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/244 (54%), Positives = 159/244 (65%), Gaps = 60/244 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ NE Q V
Sbjct: 123 CEL----------------------------------------------NEKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ RGE +A EYG++FMETSAKA+IN+E+AF+ LA+ I K R +EA + P
Sbjct: 132 SRERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDIKAKMEKR--MEANN-------P 182
Query: 244 DRGG 247
+GG
Sbjct: 183 PKGG 186
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 SD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++IN+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
>gi|225719738|gb|ACO15715.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/247 (55%), Positives = 155/247 (62%), Gaps = 57/247 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + RN V
Sbjct: 123 CDMNDR------------------------------------RN---------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K +GE +A EYG++FMETSAK++IN+E+AF LA I K R P R
Sbjct: 132 TKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEASNPPR------Q 185
Query: 244 DRGGMAG 250
DRG G
Sbjct: 186 DRGHQLG 192
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CD----------------------------------------------MNEKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K +GE +A +YG++F+ETSAK++IN+E+AF LA I K
Sbjct: 132 SKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/244 (53%), Positives = 155/244 (63%), Gaps = 62/244 (25%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T+++ GKKIKLQIW
Sbjct: 17 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIW 76
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DV++MI+G
Sbjct: 77 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNK 136
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +ER V
Sbjct: 137 CDV--EERRQ-------------------------------------------------V 145
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-----------SGRDPLE 232
+ RGE +A EYG +F+ETSAKANIN+E+AF LA I KT +GR +E
Sbjct: 146 SRERGEQLAIEYGTKFLETSAKANINVEEAFFTLARDIKLKTERASHQCTTQNTGRISME 205
Query: 233 APDR 236
P +
Sbjct: 206 QPQK 209
>gi|321465918|gb|EFX76917.1| hypothetical protein DAPPUDRAFT_106641 [Daphnia pulex]
Length = 211
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 150/231 (64%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDM----------------------------------------------NDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A EYG++FMETSAKA+IN+E AF LA I K + P
Sbjct: 132 SKDRGEQLAIEYGIKFMETSAKASINVEDAFFTLARDIKAKMEKKLEASHP 182
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 134/252 (53%), Positives = 160/252 (63%), Gaps = 61/252 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+DL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSF+NI W+RNI+EHA DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHAAADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDM----------------------------------------------NDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD-------- 235
RG+A+A ++ V+FMETSAK + N+E+AFI LA I K + LE+P+
Sbjct: 132 SAERGQALAMDHNVKFMETSAKTSANVEEAFISLARDIKKKMDRK--LESPNSNSNDGKI 189
Query: 236 RVTIDKKPDRGG 247
+VT + +P +G
Sbjct: 190 KVTTENQPKKGS 201
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/221 (58%), Positives = 151/221 (68%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA++DV+KMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWIRNIEEHASQDVDKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +VV+
Sbjct: 123 CDM-----------------------------------------------NDKRVVS--- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K +GEA+A E+G++FMETSAKA+IN+E AF LA I K
Sbjct: 133 -KEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIKAK 172
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 132/244 (54%), Positives = 155/244 (63%), Gaps = 60/244 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE +A +YG++F+ETSAK++IN+E+ F LA RD + +R D P
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSINVEEGFYTLA---------RDIMARLNRKMNDNNP 182
Query: 244 DRGG 247
GG
Sbjct: 183 SGGG 186
>gi|195427545|ref|XP_002061837.1| GK17214 [Drosophila willistoni]
gi|194157922|gb|EDW72823.1| GK17214 [Drosophila willistoni]
Length = 207
Score = 240 bits (613), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 133/244 (54%), Positives = 159/244 (65%), Gaps = 60/244 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L KKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ N+ QV
Sbjct: 123 CEL----------------------------------------------NDKRQV----- 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE +A EYG++FMETSAKA+IN+E+AF+ LA+ I KT R +EA + P
Sbjct: 132 SKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKR--MEANN-------P 182
Query: 244 DRGG 247
+GG
Sbjct: 183 PKGG 186
>gi|432958931|ref|XP_004086115.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 206
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+TVDL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVDLDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+M+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVERMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDM----------------------------------------------NDRRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +Y ++F+ETSAK++IN+E+AF+ LA I +
Sbjct: 132 SKERGEKLAIDYSIKFLETSAKSSINVEEAFLTLARDIMSR 172
>gi|195020252|ref|XP_001985156.1| GH16908 [Drosophila grimshawi]
gi|193898638|gb|EDV97504.1| GH16908 [Drosophila grimshawi]
Length = 207
Score = 240 bits (612), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 133/244 (54%), Positives = 158/244 (64%), Gaps = 60/244 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L KKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ N+ QV
Sbjct: 123 CEL----------------------------------------------NDKRQV----- 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE +A EYG++FMETSAKA+IN+E+AF+ LA+ I KT R +EA + P
Sbjct: 132 SKERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKR--MEANN-------P 182
Query: 244 DRGG 247
+GG
Sbjct: 183 PKGG 186
>gi|195128585|ref|XP_002008743.1| GI13664 [Drosophila mojavensis]
gi|195379444|ref|XP_002048489.1| GJ13999 [Drosophila virilis]
gi|193920352|gb|EDW19219.1| GI13664 [Drosophila mojavensis]
gi|194155647|gb|EDW70831.1| GJ13999 [Drosophila virilis]
Length = 207
Score = 239 bits (611), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 133/244 (54%), Positives = 158/244 (64%), Gaps = 60/244 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L KKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ N+ QV
Sbjct: 123 CEL----------------------------------------------NDKRQV----- 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE +A EYG++FMETSAKA+IN+E+AF+ LA+ I KT R +EA + P
Sbjct: 132 SKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKR--MEANN-------P 182
Query: 244 DRGG 247
+GG
Sbjct: 183 PKGG 186
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 239 bits (611), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 134/248 (54%), Positives = 155/248 (62%), Gaps = 58/248 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDINDRRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-DPLEAPDRVTIDKK 242
K +GE +A EYG++FMETSAK++IN+E+AF LA I K R P R
Sbjct: 132 TKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLQEASNPPR------ 185
Query: 243 PDRGGMAG 250
DRG G
Sbjct: 186 QDRGHQLG 193
>gi|224087698|ref|XP_002197665.1| PREDICTED: ras-related protein Rab-8A isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 149/231 (64%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC LFRFS+DAFN TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D AN+ Q V
Sbjct: 123 CD----------------------------------------------ANDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+ +GE +A +G++FMETSAKANINIE AF LA I K + +P
Sbjct: 132 SREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSP 182
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 239 bits (610), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK+++N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIMTK 172
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 239 bits (610), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 126/218 (57%), Positives = 148/218 (67%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
K RGE +A +YG++F+ETSAK++ N+E+AF+ LA I
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDI 169
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 127/227 (55%), Positives = 151/227 (66%), Gaps = 51/227 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYDFLFKLLLIGDSGVGKTC+L RFS+DAFN+TFISTIGIDFKI+TVD++GKKIKLQIW
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVDIEGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSFDNI W+RNI+E+A DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRNWIRNIEENAAADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D E+ +VV+
Sbjct: 123 CDL-----------------------------------------------EESRVVS--- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP 230
+ RG+ +A E+ V+FMETSAK+ N+E AF+ LA I +K R+P
Sbjct: 133 -RERGQLLAEEHQVKFMETSAKSGQNVETAFLNLAKDIKNKMDRRNP 178
>gi|71895669|ref|NP_001026675.1| ras-related protein Rab-8A [Gallus gallus]
gi|82231235|sp|Q5F470.1|RAB8A_CHICK RecName: Full=Ras-related protein Rab-8A; Flags: Precursor
gi|60098467|emb|CAH65064.1| hypothetical protein RCJMB04_2k8 [Gallus gallus]
Length = 207
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 134/246 (54%), Positives = 154/246 (62%), Gaps = 57/246 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC LFRFS+DAFN TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D AN+ Q V
Sbjct: 123 CD----------------------------------------------ANDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
+ +GE +A +G++FMETSAKANINIE AF LA I K G P + V I
Sbjct: 132 SREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKI 191
Query: 240 DKKPDR 245
PD+
Sbjct: 192 --TPDQ 195
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 126/219 (57%), Positives = 150/219 (68%), Gaps = 53/219 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T+++ GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIEMDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG-K 122
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSFDNI W+RNI+E+A+ DVEKM+LG K
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIKNWIRNIEENASADVEKMLLGNK 122
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
+ +G++
Sbjct: 123 CELNSGRQ---------------------------------------------------- 130
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
V K RGE +A EYG++FMETSAKA++N+E+AF LA I
Sbjct: 131 VSKERGEQLAVEYGIKFMETSAKASVNVEEAFHTLARDI 169
>gi|410912320|ref|XP_003969638.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
gi|410930031|ref|XP_003978402.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 205
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 129/244 (52%), Positives = 153/244 (62%), Gaps = 61/244 (25%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+TV+L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+M+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWMRNIEEHASSDVERMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D ++ V
Sbjct: 123 CDMDKRQ----------------------------------------------------V 130
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE +A +Y ++F+ETSAKA +N+E+AF+ LA RD + R + P
Sbjct: 131 AKERGEKLAIDYSIKFLETSAKAGLNVEEAFLTLA---------RDIMGRLSRKMNENNP 181
Query: 244 DRGG 247
GG
Sbjct: 182 SAGG 185
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK+++N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSMNVEEAFFILARDIMTK 172
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 155/248 (62%), Gaps = 58/248 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + RN V
Sbjct: 123 CDMNDR------------------------------------RN---------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-DPLEAPDRVTIDKK 242
K +GE +A EYG++FMETSAK++IN+E+AF LA I K R P R
Sbjct: 132 TKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLQEASNPPR------ 185
Query: 243 PDRGGMAG 250
DRG G
Sbjct: 186 QDRGHQLG 193
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTK 172
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDRRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/218 (58%), Positives = 147/218 (67%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT+EKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CD----------------------------------------------MNERRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
K RGE +A +YG++F+ETSAK +IN+E+AF LA I
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKTSINVEEAFFTLARDI 169
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 136/248 (54%), Positives = 154/248 (62%), Gaps = 58/248 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + RN V
Sbjct: 123 CDMNDR------------------------------------RN---------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-DPLEAPDRVTIDKK 242
K +GE +A EYG++FMETSAK+ N+E+AF LA I K R P R
Sbjct: 132 TKEKGEELAIEYGIKFMETSAKSATNVEEAFFTLARDIKAKMEKRLQEASNPPR------ 185
Query: 243 PDRGGMAG 250
DRG G
Sbjct: 186 HDRGHQLG 193
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ +GE +A +YG++F+ETSAK++IN+E+AF LA I K
Sbjct: 132 SREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 172
>gi|194374445|dbj|BAG57118.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/211 (59%), Positives = 143/211 (67%), Gaps = 51/211 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAF 214
K RGE +A +YG++FMETSAKANIN+E +
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENRY 162
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+E SAK+++N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTK 172
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 1 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 60
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 61 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 120
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 121 CD----------------------------------------------MNDKRQ-----V 129
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ +GE +A +YG++F+ETSAK++IN+E+AF LA I K
Sbjct: 130 SREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTK 170
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 238 bits (606), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASLDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|402904632|ref|XP_003915146.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Papio anubis]
gi|426387631|ref|XP_004060267.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Gorilla gorilla
gorilla]
Length = 207
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 142/208 (68%), Gaps = 51/208 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIE 211
K RGE +A +YG++FMETSAKANIN+E
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVE 159
>gi|326634496|pdb|3QBT|A Chain A, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634497|pdb|3QBT|C Chain C, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634498|pdb|3QBT|E Chain E, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|326634499|pdb|3QBT|G Chain G, Crystal Structure Of Ocrl1 540-678 In Complex With
Rab8a:gppnhp
gi|355333142|pdb|3TNF|A Chain A, Lida From Legionella In Complex With Active Rab8a
Length = 174
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 145/218 (66%), Gaps = 51/218 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIWDTA
Sbjct: 4 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 63
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG D
Sbjct: 64 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD- 122
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
N+ Q V K
Sbjct: 123 ---------------------------------------------VNDKRQ-----VSKE 132
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
RGE +A +YG++FMETSAKANIN+E AF LA I K
Sbjct: 133 RGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAK 170
>gi|397484922|ref|XP_003813614.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Pan paniscus]
Length = 207
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 141/208 (67%), Gaps = 51/208 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDVNDKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIE 211
K RGE +A +YG++FMETSAKANIN+E
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVE 159
>gi|403303364|ref|XP_003942298.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 207
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 142/208 (68%), Gaps = 51/208 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIE 211
K RGE +A +YG++FMETSAKANIN+E
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVE 159
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 125/187 (66%), Positives = 142/187 (75%), Gaps = 7/187 (3%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAFNTTFISTIGIDFKIKTV+L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN K+F+NI KWLRNIDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISKWLRNIDEHANEDVEKMIL 120
Query: 121 G-----KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
G + K ++R I + + +I EK+F ++ + + N +
Sbjct: 121 GNKCDMENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLAQAILNKSPSRDTR 180
Query: 176 P--QVVN 180
P QV+N
Sbjct: 181 PEGQVIN 187
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/115 (66%), Positives = 90/115 (78%), Gaps = 10/115 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERFHTITTSYYRGAMGIMLVYDITN K+F+NI KWLRNIDEHANED + +
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISKWLRNIDEHANEDVEKMILGNK 123
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD 229
V K RGEAIA+E+ + F+ETSAKANIN+EKAF++LA AI +K+ RD
Sbjct: 124 CDMENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLAQAILNKSPSRD 178
>gi|387017944|gb|AFJ51090.1| ras-related protein Rab-8A [Crotalus adamanteus]
Length = 207
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 147/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC LFRFS+DAFN TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIQNWVRNIEEHASPDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
DIT+++ V
Sbjct: 123 --------------------------CDITHKRQ-------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ +GE +A +G++FMETSAKANINI+ AF LA I K
Sbjct: 132 SREQGEKLAISFGIKFMETSAKANINIDNAFFTLARDIKAK 172
>gi|225717530|gb|ACO14611.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 236 bits (603), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 133/247 (53%), Positives = 154/247 (62%), Gaps = 57/247 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LF+LLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFRLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQE F TITT+YYRGAMGIMLVYD+TNEKSF NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQECFRTITTAYYRGAMGIMLVYDLTNEKSFYNIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + RN V
Sbjct: 123 CDMNDR------------------------------------RN---------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K +GE +A EYG++FMETSAK++IN+E+AF LA I K R P R
Sbjct: 132 TKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEASNPPR------Q 185
Query: 244 DRGGMAG 250
DRG G
Sbjct: 186 DRGHQLG 192
>gi|157125296|ref|XP_001654277.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125298|ref|XP_001654278.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|157125300|ref|XP_001654279.1| ras-related protein Rab-8A, putative [Aedes aegypti]
gi|108873652|gb|EAT37877.1| AAEL010170-PA [Aedes aegypti]
gi|108873654|gb|EAT37879.1| AAEL010170-PC [Aedes aegypti]
gi|403183099|gb|EJY57852.1| AAEL010170-PB [Aedes aegypti]
Length = 208
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 151/233 (64%), Gaps = 51/233 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ NE QV
Sbjct: 123 CEL----------------------------------------------NEKRQVT---- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR 236
+ RGE +A EYG++FMETSAKA+IN+++AF LA I K R P +
Sbjct: 133 -RDRGEQLAVEYGIKFMETSAKASINVDEAFFTLARDIKCKMEKRMEANNPPK 184
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ +GE +A +YG++F+ETSAK++IN+E+AF L I K
Sbjct: 132 SREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLGRDIMTK 172
>gi|347965503|ref|XP_321946.4| AGAP001211-PA [Anopheles gambiae str. PEST]
gi|333470481|gb|EAA01802.5| AGAP001211-PA [Anopheles gambiae str. PEST]
Length = 208
Score = 236 bits (601), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 131/240 (54%), Positives = 151/240 (62%), Gaps = 51/240 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T+DL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENAAADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ NE QV
Sbjct: 123 CEL----------------------------------------------NEKRQVT---- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ RGE +A EYG++FMETSAKA+IN++ AF LA I K R P + KP
Sbjct: 133 -RVRGEQLAVEYGIKFMETSAKASINVDDAFFTLARDIKCKMEKRMEANNPPKGGHQLKP 191
>gi|47223089|emb|CAG07176.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/208 (60%), Positives = 142/208 (68%), Gaps = 51/208 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMVLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CDI----------------------------------------------NDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIE 211
K RGE +A +YG++FMETSAKANIN+E
Sbjct: 132 SKDRGEKLALDYGIKFMETSAKANINVE 159
>gi|187607698|ref|NP_001120218.1| RAB10, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|166796642|gb|AAI59386.1| LOC100145267 protein [Xenopus (Silurana) tropicalis]
Length = 145
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/125 (91%), Positives = 119/125 (95%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKD 125
G D
Sbjct: 121 GNKCD 125
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 50/53 (94%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANED +
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVE 116
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 147/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS++AFNTTFIS IGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEEAFNTTFISPIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 151/229 (65%), Gaps = 53/229 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+D+FNTTFISTIGIDFKI+T++L GK++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDI+NEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDISNEKSFENIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMTDRRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR--DP 230
K RGE +A +YGV+F+ETSAK+++N+E+AF +A I S + DP
Sbjct: 132 SKDRGEKLAIDYGVKFLETSAKSSLNVEEAFYTMARDILHNLSSKTADP 180
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ +GE +A +YG++F+ETSAK++IN+E+ F LA I K
Sbjct: 132 SREKGEKLAIDYGIKFLETSAKSSINVEEGFFTLARDIMTK 172
>gi|242004648|ref|XP_002423192.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506157|gb|EEB10454.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 198
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/254 (51%), Positives = 162/254 (63%), Gaps = 57/254 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIG-IDFKIKTVDLKGKKIK 59
MAKKTYD LFK LLIGDSGVGKTC+LFRFSD+AF TTFISTIG + + ++T L +
Sbjct: 1 MAKKTYDMLFKFLLIGDSGVGKTCILFRFSDNAFTTTFISTIGKVPYILRTCLLFTVYLT 60
Query: 60 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMI 119
++I QERFHTITTSYYRGAMGIMLVYDITNE+SF NI+KWLRNIDEHANEDVEK+I
Sbjct: 61 VEILR---QERFHTITTSYYRGAMGIMLVYDITNERSFKNIVKWLRNIDEHANEDVEKLI 117
Query: 120 LGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV 179
LG D ED ++V
Sbjct: 118 LGNKCDM-----------------------------------------------EDKRIV 130
Query: 180 NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
+ K +GE I+RE+G++F+ETSAKANINI+ AF +LA AI DK +G++ EA DR+ +
Sbjct: 131 S----KEKGEEISREHGIKFLETSAKANINIDLAFEQLAEAILDKMAGKEQGEATDRIPL 186
Query: 240 DKKPDRGGMAGGCC 253
++ DRG + CC
Sbjct: 187 SQRQDRG--SNRCC 198
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 156/244 (63%), Gaps = 52/244 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 2 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 61
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA DVE+MI+G
Sbjct: 62 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 121
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D I+E V
Sbjct: 122 CD------------------------------------------IEERRE---------V 130
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ RGE +A EYG +F+ETSAKAN+NI++AF LA I K ++ + A V+ +
Sbjct: 131 SRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKME-QNEMRAGGSVSNTGRV 189
Query: 244 DRGG 247
+ GG
Sbjct: 190 NVGG 193
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 131/254 (51%), Positives = 159/254 (62%), Gaps = 56/254 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD+LFKLLLIGDSGVGKTC+LFRFS+D FN+TFISTIGIDFKIKT++L KKIKLQIW
Sbjct: 3 KAYDYLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSFDNI W+RNI+++A+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTWIRNIEQNASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D ED +VV++
Sbjct: 123 CDM-----------------------------------------------EDKRVVST-- 133
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD---PLE-APDRVTI 239
+GE +A EYGV F ETSAK+ I++E+AF +A +I K ++ P E D +
Sbjct: 134 --EQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVSTPHEHEKDIIKP 191
Query: 240 DKKPDRGGMAGGCC 253
D KP+ GGCC
Sbjct: 192 DNKPEPKS-GGGCC 204
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/244 (52%), Positives = 156/244 (63%), Gaps = 52/244 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA DVE+MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D I+E V
Sbjct: 123 CD------------------------------------------IEERRE---------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ RGE +A EYG +F+ETSAKAN+NI++AF LA I K ++ + A V+ +
Sbjct: 132 SRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKME-QNEMRAGGSVSNTGRV 190
Query: 244 DRGG 247
+ GG
Sbjct: 191 NVGG 194
>gi|325302632|tpg|DAA34101.1| TPA_exp: Ras-related protein Rab-10 [Amblyomma variegatum]
Length = 130
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 119/129 (92%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLR IDEHANEDVEKMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYIDEHANEDVEKMIL 120
Query: 121 GKTKDTAGQ 129
G D Q
Sbjct: 121 GNKCDMEEQ 129
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 49/53 (92%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLR IDEHANED +
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAKWLRYIDEHANEDVE 116
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 131/258 (50%), Positives = 157/258 (60%), Gaps = 60/258 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
+ KK YD LFKLLLIGDSGVGKTCVLFR++DD FNTTFISTIGIDFKIKT++L+GK+IKL
Sbjct: 6 VPKKAYDLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKRIKL 65
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGI+LVYDITN+KSFDNI KWL+NI+ HA+ DVE++++
Sbjct: 66 QIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITKWLQNIEMHASADVERILI 125
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W E +VV
Sbjct: 126 GNKCD--------------------------------------W---------EARRVVP 138
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K RG A+A G+ F+ETSAK N NIE+AF +LA I K P + D +D
Sbjct: 139 ----KDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRKV----PAKKEDETVLD 190
Query: 241 -----KKPDRGGMAGGCC 253
K + + CC
Sbjct: 191 LNRSKKSTEDSDKSSKCC 208
>gi|307167688|gb|EFN61191.1| Ras-related protein Rab-8A [Camponotus floridanus]
gi|332026766|gb|EGI66875.1| Ras-related protein Rab-8A [Acromyrmex echinatior]
Length = 209
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/244 (52%), Positives = 158/244 (64%), Gaps = 60/244 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TN+KSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ + + +T E+
Sbjct: 123 CELTDKRQ--------------------VTKER--------------------------- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
GE +A EYG++FMETSAK++IN+E+AF LA I K + LEA + P
Sbjct: 136 ----GEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKK--LEASN-------P 182
Query: 244 DRGG 247
+GG
Sbjct: 183 PKGG 186
>gi|410908022|ref|XP_003967490.1| PREDICTED: ras-related protein Rab-8B-like [Takifugu rubripes]
Length = 207
Score = 233 bits (593), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 147/225 (65%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+D+FNTTFISTIGIDFKI+T++L GK++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD +NEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDTSNEKSFENIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMTDRRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K RGE +A +YGV+FMETSAK+ +N+E+AF +A I S +
Sbjct: 132 SKDRGEKLAIDYGVKFMETSAKSGLNVEEAFYTMARDILHNLSSK 176
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 232 bits (592), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/221 (56%), Positives = 146/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA DVE+MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D I+E V
Sbjct: 123 CD------------------------------------------IEERRE---------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ RGE +A EYG +F+ETSAKAN+NI++AF LA I K
Sbjct: 132 SRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSK 172
>gi|332253739|ref|XP_003275989.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8A
[Nomascus leucogenys]
Length = 207
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/246 (52%), Positives = 153/246 (62%), Gaps = 57/246 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
+ +++FH ITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 XESFKQKFHXITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
K RGE +A +YG++FMETSAKANIN+E AF LA I K G P + V I
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKI 191
Query: 240 DKKPDR 245
PD+
Sbjct: 192 --TPDQ 195
>gi|322801510|gb|EFZ22171.1| hypothetical protein SINV_12925 [Solenopsis invicta]
Length = 177
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/221 (55%), Positives = 149/221 (67%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TN+KSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ + + +T E+
Sbjct: 123 CELTDKRQ--------------------VTKER--------------------------- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
GE +A EYG++FMETSAK++IN+E+AF LA I K
Sbjct: 136 ----GEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAK 172
>gi|7508349|pir||T28972 hypothetical protein T23H2.6 - Caenorhabditis elegans
Length = 216
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/127 (86%), Positives = 118/127 (92%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA++ YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDV KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL 120
Query: 121 GKTKDTA 127
G D +
Sbjct: 121 GNKCDMS 127
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/51 (94%), Positives = 49/51 (96%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
DTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+ED
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASED 114
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 145/223 (65%), Gaps = 51/223 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YDFLFKLLLIGDSGVGKTC+LFRF++D+FN TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTCLLFRFAEDSFNNTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TIT +YYRGAMGI+LVY+ITNEKSF+NI W+RNI+EHA+ +VEK+ILG
Sbjct: 63 DTAGQERFRTITNAYYRGAMGILLVYEITNEKSFENIKNWVRNIEEHASANVEKIILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D ED + V
Sbjct: 123 CDM-----------------------------------------------EDKR----QV 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTS 226
+ RG +A EYGV+FMETSAKANIN+E AF LA I K
Sbjct: 132 SRERGAQLAIEYGVKFMETSAKANINVESAFFTLARDIKAKAQ 174
>gi|348505868|ref|XP_003440482.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 207
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 146/225 (64%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+D+FNTTFISTIGIDFKI+T++L GK++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDI NEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDICNEKSFENIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMTDRRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K RGE +A +YGV+F+ETSAK+ +N+E+AF + I S +
Sbjct: 132 SKDRGEKLAIDYGVKFLETSAKSGLNVEEAFYTMGRDILHNLSSK 176
>gi|313242103|emb|CBY34279.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 133/252 (52%), Positives = 155/252 (61%), Gaps = 61/252 (24%)
Query: 8 FLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAG 67
LFKLLLIGDSGVGKTCVLFRFSDD FNTTFISTIGIDFKIKTV+L+GKKIKLQIWDTAG
Sbjct: 15 LLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 74
Query: 68 QERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTA 127
QERFHTITTSYYRGA GI+LVYDIT K+FDNI KWLRNI+EHA+EDVE+M++G D
Sbjct: 75 QERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHASEDVERMLIGNKCDM- 133
Query: 128 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHR 187
ED ++++ + R
Sbjct: 134 ----------------------------------------------EDKRLIS----EER 143
Query: 188 GEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR------VTIDK 241
G +A E G++F ETSAK NINIE AF LA I +K + P+E +R D
Sbjct: 144 GRKVAEENGIKFFETSAKENINIEIAFNSLAEDILNK---QRPVEDNERKGGVVPGVGDG 200
Query: 242 KPDRGGMAGGCC 253
+ GG G CC
Sbjct: 201 QAGSGG-PGSCC 211
>gi|432863260|ref|XP_004070049.1| PREDICTED: ras-related protein Rab-8B-like [Oryzias latipes]
Length = 239
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 146/219 (66%), Gaps = 51/219 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+D+FNTTFISTIGIDFKI+T++L GK++KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDI NEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDICNEKSFDNIKNWIRNIEEHASSDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMTDRRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY 222
K RGE +A +Y V+F+ETSAK+++N+E++F+ L ++
Sbjct: 132 SKDRGEKLAIDYRVKFLETSAKSSLNVEESFVHLMEILW 170
>gi|432094470|gb|ELK26033.1| Ras-related protein Rab-8A [Myotis davidii]
Length = 207
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 124/231 (53%), Positives = 147/231 (63%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+D FN++FISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDTFNSSFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
+T GQ+RF TITT+YYRGA+G MLVYDITNE+SFDNI W RNI+EHA+ DVEKMILG
Sbjct: 63 NTVGQDRFRTITTAYYRGAIGNMLVYDITNERSFDNIRNWTRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>gi|410961068|ref|XP_003987107.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Felis catus]
Length = 190
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 142/209 (67%), Gaps = 51/209 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEK 212
K RGE +A +YG++F+ETSAK++ N+E+
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEE 160
>gi|332235869|ref|XP_003267127.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Nomascus
leucogenys]
gi|397515494|ref|XP_003827985.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Pan paniscus]
gi|402874513|ref|XP_003901080.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Papio anubis]
Length = 190
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 142/209 (67%), Gaps = 51/209 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEK 212
K RGE +A +YG++F+ETSAK++ N+E+
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSANVEE 160
>gi|313229256|emb|CBY23842.1| unnamed protein product [Oikopleura dioica]
Length = 213
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/252 (52%), Positives = 155/252 (61%), Gaps = 61/252 (24%)
Query: 8 FLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAG 67
LFKLLLIGDSGVGKTCVLFRFSDD FNTTFISTIGIDFKIKTV+L+GKKIKLQIWDTAG
Sbjct: 15 LLFKLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 74
Query: 68 QERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTA 127
QERFHTITTSYYRGA GI+LVYDIT K+FDNI KWLRNI+EHA+EDVE+M++G D
Sbjct: 75 QERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHASEDVERMLIGNKCDM- 133
Query: 128 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHR 187
ED ++++ + R
Sbjct: 134 ----------------------------------------------EDKRLIS----EER 143
Query: 188 GEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRV------TIDK 241
G +A E G++F ETSAK NINIE AF LA I +K + P+E +R D
Sbjct: 144 GRKVAEENGIKFFETSAKENINIEIAFNSLAEDILNK---QRPVEDNERKGGVVPGLGDG 200
Query: 242 KPDRGGMAGGCC 253
+ GG G CC
Sbjct: 201 QAGSGG-PGSCC 211
>gi|403298224|ref|XP_003939930.1| PREDICTED: ras-related protein Rab-8B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 190
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 142/209 (67%), Gaps = 51/209 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEK 212
K RGE +A +YG++F+ETSAK++ N+E+
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEE 160
>gi|432106713|gb|ELK32365.1| Ras-related protein Rab-10 [Myotis davidii]
Length = 226
Score = 230 bits (586), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/248 (52%), Positives = 152/248 (61%), Gaps = 55/248 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD L KLL IGD G GKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GK IK Q W
Sbjct: 3 KTYDLLCKLLPIGDWGAGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKTIKPQTW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
+TAGQERFHTITTSY RGAMGI LV DITN +SF+NI +WLRNIDEHA+ED E+M+L
Sbjct: 63 ETAGQERFHTITTSYCRGAMGIRLVCDITNGQSFENIGRWLRNIDEHAHEDGERMLLANK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D +VV
Sbjct: 123 CDM-----------------------------------------------DDKRVVP--- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K +GE +ARE+G+RF ETSAKAN+NIEKAF+ +A AI K P+E P+ +
Sbjct: 133 -KGQGEPMAREHGIRFFETSAKANVNIEKAFLTVAEAILRKA----PVEEPNSENVGISG 187
Query: 244 DRGGMAGG 251
+ AGG
Sbjct: 188 EGSRQAGG 195
>gi|344241420|gb|EGV97523.1| Ras-related protein Rab-8A [Cricetulus griseus]
Length = 236
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 132/260 (50%), Positives = 151/260 (58%), Gaps = 80/260 (30%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDE-------------- 109
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+E
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEELRVQQWGVGYQPLS 122
Query: 110 ---------------HANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITN 154
HA+ DVEKMILG D
Sbjct: 123 SPHTAAVTLIIRSPQHASADVEKMILGNKCD----------------------------- 153
Query: 155 EKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAF 214
N+ Q V K RGE +A +YG++FMETSAKANIN+E AF
Sbjct: 154 -----------------VNDKRQ-----VSKERGEKLALDYGIKFMETSAKANINVENAF 191
Query: 215 IELATAIYDKTSGRDPLEAP 234
LA I K + +P
Sbjct: 192 FTLARDIKAKMDKKLEGNSP 211
>gi|241828866|ref|XP_002414737.1| bhlh transcription factor, putative [Ixodes scapularis]
gi|215508949|gb|EEC18402.1| bhlh transcription factor, putative [Ixodes scapularis]
Length = 125
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 111/121 (91%), Positives = 116/121 (95%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF+TTFISTIGIDFKI T++LKGKKIKL
Sbjct: 3 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKINTIELKGKKIKL 62
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIML+YDITN KSFDNI KWLR IDEHANEDVEKMIL
Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLMYDITNSKSFDNIAKWLRYIDEHANEDVEKMIL 122
Query: 121 G 121
G
Sbjct: 123 G 123
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 49/53 (92%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERFHTITTSYYRGAMGIML+YDITN KSFDNI KWLR IDEHANED +
Sbjct: 66 DTAGQERFHTITTSYYRGAMGIMLMYDITNSKSFDNIAKWLRYIDEHANEDVE 118
>gi|326435491|gb|EGD81061.1| small GTP binding protein RAB8 [Salpingoeca sp. ATCC 50818]
Length = 240
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 148/228 (64%), Gaps = 51/228 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M K YD+LFKLLLIG+SGVGKTCVLFRFSDDAFN +FISTIGIDFKI+T++L KKIKL
Sbjct: 1 MGTKAYDYLFKLLLIGESGVGKTCVLFRFSDDAFNASFISTIGIDFKIRTIELDDKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGIM+VYDITN KSFDN+ W++NI+E+A+EDVE M+L
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGIMIVYDITNPKSFDNVKNWIKNIEENASEDVELMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E+ + V+
Sbjct: 121 GNKCDM-----------------------------------------------EESRAVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K +GE +A +YG+ F+ETSAKANIN+E+AF +LA I K +
Sbjct: 134 ----KEQGEKLASDYGIPFLETSAKANINVEEAFFQLARNIKKKMDSK 177
>gi|346987769|gb|AEO51738.1| Rab8 [Helicoverpa armigera]
Length = 203
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 146/231 (63%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKT +LFRFS+DAFN +FISTIGIDFKI+T+DL GKK+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRG+MGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDLEAKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A EY ++F+ETSAK ++N+E AF LA I K + + P
Sbjct: 132 SKERGEQLAVEYQIKFIETSAKDSLNVESAFYTLARDIKAKMEKKQKVMNP 182
>gi|194387238|dbj|BAG59983.1| unnamed protein product [Homo sapiens]
Length = 190
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 141/209 (67%), Gaps = 51/209 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRF +DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFPEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEK 212
K RGE +A +YG++F+ETSAK++ N+E+
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSANVEE 160
>gi|196003794|ref|XP_002111764.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190585663|gb|EDV25731.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 216
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 121/221 (54%), Positives = 143/221 (64%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLV+DITNE+SF+NI W+RNI+EHA DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVFDITNERSFENIKTWIRNIEEHAASDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDVVDKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K + + +A EYGV+F ETSAK N+E+AF+ LA I K
Sbjct: 132 SKEQAQQLAAEYGVKFSETSAKDGHNVEEAFMTLAKDIKAK 172
>gi|1619853|gb|AAB16972.1| rab10-like, partial [Caenorhabditis elegans]
Length = 124
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/121 (90%), Positives = 116/121 (95%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA++ YD LFKLLLIGDSGVGKTC+L+RFSDDAFNTTFISTIGIDFKIKT++LKGKKIKL
Sbjct: 1 MARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+EDV KMIL
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMIL 120
Query: 121 G 121
G
Sbjct: 121 G 121
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 48/51 (94%), Positives = 49/51 (96%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
DTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI KWLRNIDEHA+ED
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASED 114
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 121/218 (55%), Positives = 145/218 (66%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYDFLFKLLLIGDSGVGKTC+L RFS+DAFN+TFISTIGIDFKI+TV+++GKKIKLQIW
Sbjct: 3 KTYDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVEIEGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIRNWIRNIEENASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + +VV+
Sbjct: 123 CDL-----------------------------------------------HESRVVSM-- 133
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
RG +A E+GV+FMETSAK+ ++E AF+ LA I
Sbjct: 134 --ERGRLLAEEHGVKFMETSAKSGTHVETAFLSLAKDI 169
>gi|326916650|ref|XP_003204619.1| PREDICTED: ras-related protein Rab-10-like [Meleagris gallopavo]
Length = 207
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 134/255 (52%), Positives = 152/255 (59%), Gaps = 58/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
++KK D K ++ G FRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 9 VSKKCVDVALKDVISGHXXXXXX-XXFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 67
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 68 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 127
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 128 GNKCDM-----------------------------------------------EDKRVVP 140
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 141 ----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 192
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 193 ISSGGGVTGWKSKCC 207
>gi|170042777|ref|XP_001849089.1| ras-related protein Rab-8A [Culex quinquefasciatus]
gi|167866246|gb|EDS29629.1| ras-related protein Rab-8A [Culex quinquefasciatus]
Length = 209
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 140/207 (67%), Gaps = 51/207 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+ NE QV
Sbjct: 123 CEL----------------------------------------------NEKRQVT---- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINI 210
+ RGE +A EYG++FMETSAKA+INI
Sbjct: 133 -RDRGEQLAVEYGIKFMETSAKASINI 158
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 226 bits (577), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/255 (49%), Positives = 162/255 (63%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA K YDFLFKLLLIGDSGVGKT ++ RF++DAF+ T+ISTIGIDFKIKT++++GK+IKL
Sbjct: 1 MAHK-YDFLFKLLLIGDSGVGKTSIIHRFTEDAFSPTYISTIGIDFKIKTIEVRGKRIKL 59
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGI++VYDIT+E SFDNI KWLR I+ HA+EDV+K++L
Sbjct: 60 QIWDTAGQERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAKWLRYIELHASEDVQKILL 119
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
AN+ +
Sbjct: 120 ---------------------------------------------------ANKCDVIER 128
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLE--APDRVT 238
V RGE IA+ +G++F+ETSA++NINI+KAF +LA AI +K +G + +E A R
Sbjct: 129 RAVSSERGEKIAKAHGIKFLETSARSNINIQKAFGDLAEAILNKVTGDEQVEKTATVRPG 188
Query: 239 IDKKPDRGGMAGGCC 253
I + + GCC
Sbjct: 189 ISRTSTK---RIGCC 200
>gi|357630896|gb|EHJ78715.1| small GTP binding protein RAB8 [Danaus plexippus]
Length = 209
Score = 226 bits (576), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 145/231 (62%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKT +LFRFS+DAFN +FISTIGIDFKI+T+DL GKK+KLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRG+MGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDLDAKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A EY ++F+ETSAK ++N+E AF LA I K + P
Sbjct: 132 SKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNP 182
>gi|112982896|ref|NP_001037576.1| small GTP binding protein RAB8 [Bombyx mori]
gi|95102574|gb|ABF51225.1| small GTP binding protein RAB8 [Bombyx mori]
gi|102993217|gb|ABF71468.1| ras-related GTP-binding protein Rab8 [Bombyx mori]
Length = 210
Score = 225 bits (574), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 144/231 (62%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD LFKLLLIGDSGVGKT +LFRFS+DAFN +FISTIGIDFKI+T+DL GKK+KLQIW
Sbjct: 3 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRG+MGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D Q + V
Sbjct: 123 CDLDSQRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A EY ++F+ETSAK ++N+E AF LA I K + P
Sbjct: 132 SKERGEQLAIEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNP 182
>gi|357440491|ref|XP_003590523.1| Ras-like protein [Medicago truncatula]
gi|355479571|gb|AES60774.1| Ras-like protein [Medicago truncatula]
Length = 234
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/258 (44%), Positives = 160/258 (62%), Gaps = 39/258 (15%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +R +T S + H P S
Sbjct: 128 NKADMDESKRV-CLTHSLF-----------------------------VHPFHFP--CTS 155
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
C + G+A+A EYG++F ETSAK N+N+++ F +A I + + D P + I+
Sbjct: 156 ISCDYYGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAESDSKTEPQTLKIN- 214
Query: 242 KPDRGG------MAGGCC 253
+PD+G CC
Sbjct: 215 QPDQGAGSAQASQTSSCC 232
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 153/257 (59%), Gaps = 55/257 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+TVDL GK+IKLQ
Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +R
Sbjct: 128 NKADMDESKR-------------------------------------------------- 137
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR---VT 238
V RG+A+A E+G++F ETSAK N+N+EK F +A I + + D P R +
Sbjct: 138 AVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTIAGDIKRRLAETDSRPEPPRINNIV 197
Query: 239 IDKKPDRGG--MAGGCC 253
+D D+G CC
Sbjct: 198 LDPSKDQGSDKAKSTCC 214
>gi|432095538|gb|ELK26690.1| Ras-related protein Rab-8A [Myotis davidii]
Length = 224
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/248 (51%), Positives = 147/248 (59%), Gaps = 68/248 (27%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+D FN++FISTIGIDFKI+T++L GK+IKLQ
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDTFNSSFISTIGIDFKIRTIELDGKRIKLQRL 62
Query: 64 DTAGQERFHTITTSYYRGAM-----------------GIMLVYDITNEKSFDNILKWLRN 106
DTAGQERF TITT+YYRGAM G MLVYDITNEKSFDNI W+RN
Sbjct: 63 DTAGQERFRTITTAYYRGAMVRIAHSFSGTSLSPPAHGNMLVYDITNEKSFDNIRNWIRN 122
Query: 107 IDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLR 166
I+EHA+ DVEKMILG D
Sbjct: 123 IEEHASADVEKMILGNKCD----------------------------------------- 141
Query: 167 NIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTS 226
N+ Q V K RGE +A +YG++FMETSAKANIN+E AF LA I K
Sbjct: 142 -----VNDKRQ-----VSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMD 191
Query: 227 GRDPLEAP 234
+ +P
Sbjct: 192 KKLEGNSP 199
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 115/244 (47%), Positives = 153/244 (62%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 1831 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVW 1890
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 1891 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 1950
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 1951 CDMEAKRK---------------------------------------------------V 1959
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + L + D T
Sbjct: 1960 QKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNGNKLPSTDLKT 2019
Query: 239 IDKK 242
DKK
Sbjct: 2020 SDKK 2023
>gi|449483368|ref|XP_004156569.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 221
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 153/253 (60%), Gaps = 50/253 (19%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R T ++ V
Sbjct: 132 MDESKRVRTFSS---------------------------------------------VPT 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P + I++ +
Sbjct: 147 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLSDSDSKSEPQTIKINQADNG 206
Query: 246 GGMA-----GGCC 253
G + CC
Sbjct: 207 AGASQTAQKSACC 219
>gi|1546067|gb|AAB08102.1| GTPase SUrab10p, partial [Strongylocentrotus purpuratus]
Length = 178
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 143/231 (61%), Gaps = 55/231 (23%)
Query: 24 CVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAM 83
C+LFRFSDD F+TTFISTIGIDFKIKTV+L GKKIKLQIWDTAGQERFHTITTSYYRGAM
Sbjct: 1 CLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQIWDTAGQERFHTITTSYYRGAM 60
Query: 84 GIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGA 143
GIMLVYDI EK+FDNI KWLRNI EHANEDVEKM+LG D
Sbjct: 61 GIMLVYDIMQEKTFDNIAKWLRNIQEHANEDVEKMLLGNKCDM----------------- 103
Query: 144 MGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETS 203
+D +++N K RGE IA+E G++FMETS
Sbjct: 104 ------------------------------DDKRMIN----KDRGETIAKENGIKFMETS 129
Query: 204 AKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDRGGMAGG-CC 253
AKANIN+E+AF+ LA I K RD +P V D K G +G CC
Sbjct: 130 AKANINVEQAFMTLAADILKKYPQRDT-GSPGVVKPDMK--EGSSSGSKCC 177
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 220 bits (560), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 122/233 (52%), Positives = 141/233 (60%), Gaps = 51/233 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD+LFKLLLIGDSGVGKT +L RFSD+ FN TFISTIGIDFKI+TVD+ GKKIKLQIW
Sbjct: 3 KCYDYLFKLLLIGDSGVGKTSILLRFSDNLFNQTFISTIGIDFKIRTVDIDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITN+ SF+NI W++NIDEHAN DVEKM+LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIKTWMQNIDEHANNDVEKMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +DE +
Sbjct: 123 CD------------------------------------------VDEKRQ---------I 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR 236
+G +A + + FMETSAK+NINI +AF LAT I K L P R
Sbjct: 132 SFQQGLQLANSHNILFMETSAKSNINITEAFEALATGIKVKMERNMDLNNPPR 184
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 153/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN-QPDQ 200
Query: 246 GGMA------GGCC 253
G A CC
Sbjct: 201 AGSASQAAPKSACC 214
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 136/183 (74%), Gaps = 5/183 (2%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DV++MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNK 122
Query: 124 KD-----TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQV 178
D +ER + Y M +I E++F + + ++ E A+++
Sbjct: 123 CDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQEHTT 182
Query: 179 VNS 181
N+
Sbjct: 183 QNT 185
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/132 (56%), Positives = 88/132 (66%), Gaps = 13/132 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT---SGRDPL 231
V + RGE +A EYG +FMETSAKANIN+E+AF LA I KT S
Sbjct: 123 CDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQEHTT 182
Query: 232 EAPDRVTIDKKP 243
+ R+T+ + P
Sbjct: 183 QNTGRITVHQTP 194
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 151/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK--- 242
RG+A+A E+G++F ETSAK N+N+E+ F +A I + + D P + I+K
Sbjct: 143 -RGQALADEFGIKFFETSAKTNLNVEQVFFTIARDIKQRLAESDTKVEPQTIKINKPDPA 201
Query: 243 --PDRGGMAGGCC 253
P + CC
Sbjct: 202 KGPGKAAERSSCC 214
>gi|148678840|gb|EDL10787.1| RAB8A, member RAS oncogene family, isoform CRA_d [Mus musculus]
gi|149036166|gb|EDL90832.1| RAB8A, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 185
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 114/122 (93%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 54/75 (72%), Gaps = 10/75 (13%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 180 -----NSWVCKHRGE 189
V K RGE
Sbjct: 123 CDVNDKRQVSKERGE 137
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 154/258 (59%), Gaps = 57/258 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVP----- 140
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+
Sbjct: 141 ---TSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKTEPQTLKIN- 196
Query: 242 KPDRGG------MAGGCC 253
+PD+G CC
Sbjct: 197 QPDQGAGSAQASQTSSCC 214
>gi|270010835|gb|EFA07283.1| hypothetical protein TcasGA2_TC014518 [Tribolium castaneum]
Length = 208
Score = 218 bits (555), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/141 (75%), Positives = 120/141 (85%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T+DL GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG-- 121
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 122 ---KTKDTAGQERFHTITTSY 139
+ K +ER + Y
Sbjct: 123 CELEEKRQVSKERGEQLAIEY 143
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGE +A EYG++F+ETSAKA+I +E+AF LA I K + LEA
Sbjct: 123 CELEEKRQVSKERGEQLAIEYGIKFIETSAKASIRVEEAFFTLARDIKAKMEKK--LEAS 180
Query: 235 DRVTIDKKPDRGG 247
+ P +GG
Sbjct: 181 N-------PPKGG 186
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 120/141 (85%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK- 122
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 123 ----TKDTAGQERFHTITTSY 139
+K +ER + Y
Sbjct: 123 CELTSKRQVSKERGEALAIEY 143
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 67/114 (58%), Positives = 83/114 (72%), Gaps = 10/114 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
V K RGEA+A EYG++FMETSAK++IN+E+AF LA I K R
Sbjct: 123 CELTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKR 176
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 153/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P + I+ + D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLSESDSKTEPQAIRIN-QSDQ 200
Query: 246 GGMAG------GCC 253
G +G CC
Sbjct: 201 AGTSGQAAQKSSCC 214
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 120/141 (85%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK- 122
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 123 ----TKDTAGQERFHTITTSY 139
+K +ER + Y
Sbjct: 123 CELTSKRQVSKERGEALAIEY 143
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 91/133 (68%), Gaps = 19/133 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGEA+A EYG++FMETSAK++IN+E+AF LA I K R LEA
Sbjct: 123 CELTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKR--LEAS 180
Query: 235 DRVTIDKKPDRGG 247
+ P +GG
Sbjct: 181 N-------PPKGG 186
>gi|159461696|gb|ABW96887.1| Rab8 [Danio rerio]
Length = 136
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/122 (85%), Positives = 114/122 (93%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVE 115
>gi|91083485|ref|XP_971858.1| PREDICTED: similar to ras-related protein Rab-8A, putative
[Tribolium castaneum]
Length = 221
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/141 (75%), Positives = 120/141 (85%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T+DL GKKIKLQIW
Sbjct: 16 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIDLDGKKIKLQIW 75
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG-- 121
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 76 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLLGNK 135
Query: 122 ---KTKDTAGQERFHTITTSY 139
+ K +ER + Y
Sbjct: 136 CELEEKRQVSKERGEQLAIEY 156
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 89/133 (66%), Gaps = 19/133 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 76 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLLGNK 135
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGE +A EYG++F+ETSAKA+I +E+AF LA I K + LEA
Sbjct: 136 CELEEKRQVSKERGEQLAIEYGIKFIETSAKASIRVEEAFFTLARDIKAKMEKK--LEAS 193
Query: 235 DRVTIDKKPDRGG 247
+ P +GG
Sbjct: 194 N-------PPKGG 199
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 153/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRAEPQTIKIN-QPDP 200
Query: 245 --RGGMAG---GCC 253
GG A CC
Sbjct: 201 SASGGQAAQKSACC 214
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 155/254 (61%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 ---GGMAG---GCC 253
GG+A CC
Sbjct: 201 TATGGLAAQKSACC 214
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 153/253 (60%), Gaps = 56/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 73 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNKILVGNKAD 132
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 133 ------------------------------------------MDESKRAVP--------T 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I K + D P + I+ +PD
Sbjct: 143 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQKLADTDSRAEPQTIQIN-QPDA 201
Query: 245 --RGGMAG--GCC 253
GG A CC
Sbjct: 202 SASGGQAAQKSCC 214
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 155/254 (61%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 ---GGMAG---GCC 253
GG+A CC
Sbjct: 201 AATGGLAAQKSACC 214
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 154/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L G++IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGRRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRAEPQTIRIN-QPDQ 200
Query: 246 ---GGMAG---GCC 253
GG A CC
Sbjct: 201 AANGGQAAQKSACC 214
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 151/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P + I++ +
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLSDSDSKSEPQTIKINQADNG 201
Query: 246 GGMA-----GGCC 253
G + CC
Sbjct: 202 AGASQTAQKSACC 214
>gi|296425671|ref|XP_002842363.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638628|emb|CAZ86554.1| unnamed protein product [Tuber melanosporum]
Length = 206
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/255 (45%), Positives = 152/255 (59%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 GSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVT 238
RG+ +A E G+ FME SAK+NIN+EKAF LAT I + T+ +
Sbjct: 136 ----ERGQQLADELGIPFMEVSAKSNINVEKAFFSLATDIKKRIMDTARAEEKAGGQGSV 191
Query: 239 IDKKPDRGGMAGGCC 253
+D D G M+G CC
Sbjct: 192 VDPSRDSGNMSGKCC 206
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/252 (45%), Positives = 151/252 (59%), Gaps = 55/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFL KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D + DR +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSESDS-KPEDRTISINRPDG 200
Query: 246 GGMAG----GCC 253
G + CC
Sbjct: 201 GEASASQKSACC 212
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 119/141 (84%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 -----KDTAGQERFHTITTSY 139
K +ER + Y
Sbjct: 123 CELTEKRQVSKERGEQLAVEY 143
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 81/110 (73%), Gaps = 10/110 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V K RGE +A EYG++FMETSAK++IN+E+AF LA I K
Sbjct: 123 CELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAK 172
>gi|383864073|ref|XP_003707504.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Megachile
rotundata]
Length = 209
Score = 217 bits (552), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 119/141 (84%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 -----KDTAGQERFHTITTSY 139
K +ER + Y
Sbjct: 123 CELTEKRQVSKERGEQLAVEY 143
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 90/133 (67%), Gaps = 19/133 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGE +A EYG++FMETSAK++IN+E+AF LA I K + LEA
Sbjct: 123 CELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKK--LEAS 180
Query: 235 DRVTIDKKPDRGG 247
+ P +GG
Sbjct: 181 N-------PPKGG 186
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 155/256 (60%), Gaps = 61/256 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDNRAEPQTIRIN-QPDQ 200
Query: 246 GGMAGG--------CC 253
G AGG CC
Sbjct: 201 G--AGGAQTAQKSACC 214
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 119/141 (84%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 -----KDTAGQERFHTITTSY 139
K +ER + Y
Sbjct: 123 CELTEKRQVSKERGEQLAVEY 143
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/110 (59%), Positives = 81/110 (73%), Gaps = 10/110 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V K RGE +A EYG++FMETSAK++IN+E+AF LA I K
Sbjct: 123 CELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAK 172
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 104/141 (73%), Positives = 119/141 (84%), Gaps = 5/141 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 124 -----KDTAGQERFHTITTSY 139
K +ER + Y
Sbjct: 123 CELTEKRQVSKERGEQLAVEY 143
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/133 (53%), Positives = 90/133 (67%), Gaps = 19/133 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGE +A EYG++FMETSAK++IN+E+AF LA I K + LEA
Sbjct: 123 CELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKK--LEAS 180
Query: 235 DRVTIDKKPDRGG 247
+ P +GG
Sbjct: 181 N-------PPKGG 186
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 136/183 (74%), Gaps = 5/183 (2%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DV++MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNK 122
Query: 124 KD-----TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQV 178
D +ER + Y M +I E++F + + ++ E A+++
Sbjct: 123 CDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQENTT 182
Query: 179 VNS 181
N+
Sbjct: 183 QNT 185
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 90/136 (66%), Gaps = 13/136 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT---SGRDPL 231
V + RGE +A EYG +FMETSAKANIN+E+AF LA I KT S +
Sbjct: 123 CDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQENTT 182
Query: 232 EAPDRVTIDKKPDRGG 247
+ R+T+ + P +
Sbjct: 183 QNTGRITVHQTPRKSS 198
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 112/258 (43%), Positives = 154/258 (59%), Gaps = 57/258 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVP----- 140
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+++ F +A I + + D P + I+
Sbjct: 141 ---TSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAESDSKTEPQTLKIN- 196
Query: 242 KPDRGG------MAGGCC 253
+PD+G CC
Sbjct: 197 QPDQGAGSAQASQTSSCC 214
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 153/253 (60%), Gaps = 56/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 73 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNKILVGNKAD 132
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 133 ------------------------------------------MDESKRAVP--------T 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD
Sbjct: 143 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIQIN-QPDA 201
Query: 245 --RGGMAG--GCC 253
GG A CC
Sbjct: 202 SASGGQAAQKSCC 214
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 154/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLAETDSKAEPQTIKIN-QPDQ 200
Query: 246 ---GGMA---GGCC 253
GG A CC
Sbjct: 201 AANGGQAPQKSACC 214
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/254 (44%), Positives = 154/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKKRLAETDSKAEPQTIKIN-QPDQ 200
Query: 246 ---GGMAG---GCC 253
GG A CC
Sbjct: 201 AASGGQAAQKSACC 214
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 118/256 (46%), Positives = 154/256 (60%), Gaps = 59/256 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T+DL GK+IKLQ
Sbjct: 3 GSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRIKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W +N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQTWFQNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA----TAIYDKTSGRDPLEAPDRV 237
RG+A+A E G+ FME SAKANIN+E+AF+ LA I D +SG P V
Sbjct: 136 ----ERGQALANELGIPFMEVSAKANINVEEAFLLLARDIKKRIMDSSSGEK--NQPGVV 189
Query: 238 TIDKKPDRGGMAGGCC 253
+++ G G CC
Sbjct: 190 NVNETSSAAG--GKCC 203
>gi|195163385|ref|XP_002022531.1| GL13084 [Drosophila persimilis]
gi|194104523|gb|EDW26566.1| GL13084 [Drosophila persimilis]
Length = 170
Score = 216 bits (550), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 102/111 (91%), Positives = 108/111 (97%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTC+LFRFSDDAF +TFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHA 111
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEH
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEHG 111
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 90/130 (69%), Gaps = 25/130 (19%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSF+NI+KWLRNIDEH
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNIDEH------------- 110
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK-P 243
G+RFMETSAK+N NIE+AF ELA AI DKTSG++ E P+RV ID++
Sbjct: 111 -----------GIRFMETSAKSNTNIERAFCELAEAILDKTSGKEAAENPERVVIDRRNN 159
Query: 244 DRGGMAGGCC 253
D+ CC
Sbjct: 160 DKAPGYSKCC 169
>gi|350535551|ref|NP_001233944.1| GTP-binding protein [Solanum lycopersicum]
gi|313029|emb|CAA49600.1| GTP-binding protein [Solanum lycopersicum]
Length = 216
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 152/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGD+GVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDTGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F + I + S D P + I+ + D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIGKDIKQRLSESDSKTEPQSIRIN-QSDQ 200
Query: 246 GGMAG------GCC 253
G AG CC
Sbjct: 201 AGTAGQGAQKSSCC 214
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 152/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN-QPDQ 200
Query: 246 GGMAG------GCC 253
G CC
Sbjct: 201 AASGGRPAQKSACC 214
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 154/256 (60%), Gaps = 61/256 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSKAEPSTLKIN-QPDA 200
Query: 246 GGMAGG--------CC 253
G AGG CC
Sbjct: 201 G--AGGSQAAQKSACC 214
>gi|149028911|gb|EDL84252.1| RAB8B, member RAS oncogene family, isoform CRA_b [Rattus
norvegicus]
Length = 175
Score = 216 bits (550), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 114/122 (93%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVE 115
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 153/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A +YG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 GGMA------GGCC 253
G A CC
Sbjct: 201 AGGANQAAQKSACC 214
>gi|15231847|ref|NP_190929.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|30693873|ref|NP_850696.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|145332825|ref|NP_001078278.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|297820096|ref|XP_002877931.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|75098184|sp|O24466.1|RAE1A_ARATH RecName: Full=Ras-related protein RABE1a; Short=AtRABE1a; AltName:
Full=Ras-related protein Rab8B; Short=AtRab8B
gi|2289961|gb|AAB65088.1| AtRAB8 [Arabidopsis thaliana]
gi|6729512|emb|CAB67668.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|21555222|gb|AAM63807.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|28466873|gb|AAO44045.1| At3g53610 [Arabidopsis thaliana]
gi|110736141|dbj|BAF00042.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|110740068|dbj|BAF01936.1| GTPase AtRAB8 [Arabidopsis thaliana]
gi|297323769|gb|EFH54190.1| ATRAB8 [Arabidopsis lyrata subsp. lyrata]
gi|332645595|gb|AEE79116.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645596|gb|AEE79117.1| RAB GTPase-8 [Arabidopsis thaliana]
gi|332645597|gb|AEE79118.1| RAB GTPase-8 [Arabidopsis thaliana]
Length = 216
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 150/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA++ V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P K
Sbjct: 132 ------------------------------------------MDESKRAVP--------K 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++
Sbjct: 142 SKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQSDQG 201
Query: 246 GGMA-----GGCC 253
G + CC
Sbjct: 202 AGTSQATQKSACC 214
>gi|26341800|dbj|BAC34562.1| unnamed protein product [Mus musculus]
Length = 191
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 114/122 (93%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVE 115
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 152/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKAEPQTIRIN-QPDQ 200
Query: 246 GGMA------GGCC 253
A CC
Sbjct: 201 AAGASQSVQKSACC 214
>gi|148694184|gb|EDL26131.1| RAB8B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 192
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 114/122 (93%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVE 115
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 152/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P K
Sbjct: 132 ------------------------------------------MDESKRAVP--------K 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I + D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAEPATIKI-SQTDQ 200
Query: 246 GGMAG------GCC 253
AG CC
Sbjct: 201 AAGAGQATQKSACC 214
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/258 (43%), Positives = 155/258 (60%), Gaps = 57/258 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVP----- 140
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+++ F +A I + + D P + I+
Sbjct: 141 ---TSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQRLAETDSKTEPQTLKIN- 196
Query: 242 KPDRGGMAG------GCC 253
+PD+G + CC
Sbjct: 197 QPDQGAGSAQATQKSACC 214
>gi|225435058|ref|XP_002284365.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297746128|emb|CBI16184.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 152/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPTAIRIN-QPDQ 200
Query: 246 GGMAG------GCC 253
G CC
Sbjct: 201 ASGVGQTAQKSACC 214
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 152/250 (60%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 GGMAGG--CC 253
A CC
Sbjct: 201 PAAAQNFTCC 210
>gi|449460967|ref|XP_004148215.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449528087|ref|XP_004171038.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 153/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F + I + + D P + I+++ D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLADTDSKAEPSTIKINQQ-DQ 200
Query: 246 GGMAG------GCC 253
G AG CC
Sbjct: 201 GANAGQAAQKSACC 214
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 150/257 (58%), Gaps = 55/257 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RF+DD+F T+FI+TIGIDFKI+ +L GK+IKLQ
Sbjct: 8 ARADYDYLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYR AMGI+LVYD+T+E SF+NI W++NI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRNWIKNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +R
Sbjct: 128 NKADMDESKR-------------------------------------------------- 137
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
V RG+ +A EYG++F ETSAK NIN+E+AF +A I + S D AP +TI+
Sbjct: 138 AVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIMKRLSETDFRPAPQTITINN 197
Query: 242 KPDRGGMAGG-----CC 253
G A CC
Sbjct: 198 PNTAEGPASASSKSRCC 214
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 152/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P K
Sbjct: 132 ------------------------------------------MDESKRAVP--------K 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I + D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDSRAEPATIKI-SQTDQ 200
Query: 246 GGMAG------GCC 253
AG CC
Sbjct: 201 AAGAGQATHKSACC 214
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 156/250 (62%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L+GK+IKLQIWDT
Sbjct: 15 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 74
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA + V KM++G D
Sbjct: 75 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCD 134
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + +VV+S
Sbjct: 135 MA-----------------------------------------------EKKVVDS---- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--SGRDPLEAPDRVTIDKKP 243
RG+++A EYG++F+ETSAK +IN+E+AFI LA I + + +P + + + + P
Sbjct: 144 ARGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEPPQLHSKPDLTQNP 203
Query: 244 DRGGMAGGCC 253
+ GCC
Sbjct: 204 N--NKKRGCC 211
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/228 (48%), Positives = 148/228 (64%), Gaps = 52/228 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YDFLFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFK+KT+D+ GKK+KL
Sbjct: 1 MAKK-YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKL 59
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
Q+WDTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ V +M+L
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLL 119
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + +
Sbjct: 120 GNKCDIEAKRK------------------------------------------------- 130
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
V K GE +A+++G+RF ETSAK++IN+E++F+ LA I K+S +
Sbjct: 131 --VSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSSKK 176
>gi|308804045|ref|XP_003079335.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
gi|116057790|emb|CAL53993.1| Rab-type small GTP-binding protein-like (ISS) [Ostreococcus tauri]
Length = 213
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 154/249 (61%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKIKTV+L GK++KLQIWDT
Sbjct: 18 YDHLLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVELGGKRVKLQIWDT 77
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+++E+SF+N+ W+RNI++HA+ +V K+++G D
Sbjct: 78 AGQERFRTITTAYYRGAMGILLVYDVSDERSFENVRGWMRNIEQHASSNVNKILIGNKCD 137
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED +V++ K
Sbjct: 138 V----------------------------------------------KEDKRVIS----K 147
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
RG+A+A E+G+ F ETSAK+++N+ AF+ +A I ++ +G L AP+ + + DR
Sbjct: 148 ARGQALADEFGIPFFETSAKSSVNVNDAFMTIAGDIKNRLTGSKGLGAPNAINL---GDR 204
Query: 246 GGMA-GGCC 253
CC
Sbjct: 205 AATKRASCC 213
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 153/254 (60%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+++ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVDEVFFSIARDIKQRVADNDSKAEPQTLKIN-QPDQ 200
Query: 246 GGMAG------GCC 253
G + CC
Sbjct: 201 GAGSAQAAQKSACC 214
>gi|359806847|ref|NP_001241313.1| uncharacterized protein LOC100779203 [Glycine max]
gi|255641310|gb|ACU20932.1| unknown [Glycine max]
Length = 214
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/254 (44%), Positives = 153/254 (60%), Gaps = 58/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++ D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDTKAEPSTIKINQ--DQ 199
Query: 246 GGMAG------GCC 253
G AG CC
Sbjct: 200 SGGAGQAAQKSACC 213
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 149/253 (58%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N N+E+ F +A I + + D P + I K
Sbjct: 142 SQGQALADEYGIKFFETSAKTNFNVEQVFFSIARDIKQRIAESDSKAEPLTIKISKPDPA 201
Query: 246 GGMA-----GGCC 253
G A CC
Sbjct: 202 IGSATAQEKSACC 214
>gi|389612086|dbj|BAM19568.1| ras-related protein Rab-8, partial [Papilio xuthus]
Length = 211
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/231 (51%), Positives = 145/231 (62%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD LFKLLLIGDSGVGKT +LFRFS+DAFN +FISTIGIDFKI+T+DL GKK+KLQIW
Sbjct: 3 KTYDCLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRG+MGIMLVYD+TNEKSF+NI +RNI+E+A+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNGIRNIEENASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D + V+
Sbjct: 123 CDL-----------------------------------------------DDKRQVS--- 132
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +Y ++F+ETSAK ++N+E AF LA I K + P
Sbjct: 133 -KERGEQLAIDYQIKFVETSAKDSLNVEYAFYTLARDIKAKMEKKQEASNP 182
>gi|115916189|ref|XP_788933.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Strongylocentrotus
purpuratus]
Length = 224
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 128/251 (50%), Positives = 152/251 (60%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNT--TFISTIGIDFKIKTVDLKGKKIKLQIW 63
YD++FK+L+IGDS VGKT ++ FS + + +TIGIDFKIKTV+L GKKIKLQIW
Sbjct: 27 YDYIFKVLVIGDSYVGKTALITIFSTGRASPYRDYQTTIGIDFKIKTVELNGKKIKLQIW 86
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERFHTITTSYYRGAMGIMLVYDIT EK+FDNI KWLRNI EHANEDVEKM+LG
Sbjct: 87 DTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHANEDVEKMLLGNK 146
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D +++N
Sbjct: 147 CDM-----------------------------------------------DDKRMIN--- 156
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE IA+E G++FMETSAKANIN+E+AF+ LA I K RD +P V D K
Sbjct: 157 -KDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRD-TGSPGVVKPDMK- 213
Query: 244 DRGGMAGG-CC 253
G +G CC
Sbjct: 214 -EGSSSGSKCC 223
>gi|147783308|emb|CAN64127.1| hypothetical protein VITISV_022421 [Vitis vinifera]
Length = 216
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 152/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPTAIRIN-QPDQ 200
Query: 246 GGMAG------GCC 253
G CC
Sbjct: 201 AXGVGQTAQKSACC 214
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 150/253 (59%), Gaps = 57/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+G+A+A EYG+ F ETSAK N+N+E+ F +A I + S D P+ TI KP+
Sbjct: 142 SKGQALADEYGITFFETSAKTNLNVEQVFFSIARDIKQRLSESDS--KPEGGTIKIKPEG 199
Query: 245 ----RGGMAGGCC 253
G CC
Sbjct: 200 EADAAGAQKSACC 212
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 152/253 (60%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK--P 243
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+++
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRSEPQTIKINQQDPA 201
Query: 244 DRGGMAG---GCC 253
GG A CC
Sbjct: 202 ANGGQAATKSACC 214
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 152/250 (60%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L G++IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGERIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 GGMA--GGCC 253
A CC
Sbjct: 201 PAAAQNSTCC 210
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 144/235 (61%), Gaps = 51/235 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YDFLFKLLLIGDSGVGKT +LFRFSD+ F+ +FISTIGIDFKI+ +++ GKKIKLQIW
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+T E +F+NI W+RN DEHA DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTDEHAAADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CDM----------------------------------------------NELRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVT 238
K RGE +A E+ ++FMETSA ++IN+E+AF LA I +K + A + T
Sbjct: 132 SKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLARDIKEKMERKVAARAQPKPT 186
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/253 (44%), Positives = 152/253 (60%), Gaps = 56/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D + D+ KPD+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDS-KPEDKAIKINKPDQ 200
Query: 246 GGMA-----GGCC 253
G A CC
Sbjct: 201 GSEAPAAQRSACC 213
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 112/243 (46%), Positives = 151/243 (62%), Gaps = 51/243 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RFS+D+FN+T+ISTIGIDFKI+T +++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+E+S++NI W+++I E+A+ VE+M+LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENASAGVERMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMENKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K RGE +A+E+G+RF ETSAK+++N++++F LAT I K S R D V +
Sbjct: 132 PKERGEKLAKEHGIRFFETSAKSSLNVDESFNTLATDILMKISKRSAPGVKDPVDLKGSS 191
Query: 244 DRG 246
+G
Sbjct: 192 KKG 194
>gi|349804657|gb|AEQ17801.1| putative c chain of rab8 [Hymenochirus curtipes]
Length = 124
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/118 (85%), Positives = 113/118 (95%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILG 120
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVE 115
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L+GK+IKLQIWDT
Sbjct: 15 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 74
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA E V KM++G D
Sbjct: 75 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNKCD 134
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +VV+S
Sbjct: 135 LP-----------------------------------------------EKKVVDS---- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
RG+A+A EYG++F+ETSAK +IN+E+AFI LA I
Sbjct: 144 SRGKALADEYGIKFLETSAKNSINVEEAFISLAKDI 179
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 150/253 (59%), Gaps = 57/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
RG+A+A EYG++F ETSAK N+N+E+ F +A I + + D P+ TI
Sbjct: 142 SRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAESDS--KPEDRTISINRPE 199
Query: 246 GGMA-----GGCC 253
GG A CC
Sbjct: 200 GGEASASQKSACC 212
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 144/233 (61%), Gaps = 51/233 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YDFLFKLLLIGDSGVGKT +LFRFSD+ F+ +FISTIGIDFKI+ +++ GKKIKLQIW
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+T E +F+NI W+RN DEHA DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTKENTFENIKTWIRNTDEHAAADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ QV
Sbjct: 123 CDM----------------------------------------------NDLRQV----- 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR 236
+ RGE +A E+G++FMETSA ++IN+E AF LA I +K + +A +
Sbjct: 132 SRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLARDIKEKMERKVAAQAQPK 184
>gi|3024527|sp|Q39433.1|RB1BV_BETVU RecName: Full=Ras-related protein RAB1BV
gi|974776|emb|CAA89021.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 215
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 152/252 (60%), Gaps = 54/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP-LEAPDRVTI---DK 241
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D EA +TI D+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQ 201
Query: 242 KPDRGGMAGGCC 253
++ CC
Sbjct: 202 SGNQAAAKSACC 213
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/244 (47%), Positives = 153/244 (62%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 150/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D + I+ K D+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPEDKTIKINNKTDQ 201
Query: 246 G-----GMAGGCC 253
G CC
Sbjct: 202 GADKPAASGSACC 214
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 150/253 (59%), Gaps = 57/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK++KLQIWDT
Sbjct: 26 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDT 85
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 86 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 145
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 146 ------------------------------------------MDESKRAVPT-------- 155
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
RG+A+A EYG++F ETSAK N+N+E+ F +A I + + D P+ TI
Sbjct: 156 SRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAESD--SKPEDRTISINRPE 213
Query: 246 GGMA-----GGCC 253
GG A CC
Sbjct: 214 GGEASASQKSACC 226
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 112/251 (44%), Positives = 150/251 (59%), Gaps = 53/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIKNIEQHASDNVSKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D + I+ + D
Sbjct: 142 SKGQALADEYGIQFFETSAKTNMNVEQVFFSIARDIKQRLSEADSKPEGGTIKINTEGDA 201
Query: 246 GGMAG---GCC 253
AG CC
Sbjct: 202 SAAAGQKSACC 212
>gi|388507596|gb|AFK41864.1| unknown [Lotus japonicus]
Length = 212
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 152/250 (60%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE+ P
Sbjct: 132 ------------------------------------------MDENKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+ +E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLTLEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 GGMA--GGCC 253
A CC
Sbjct: 201 PAAAQNSTCC 210
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/259 (42%), Positives = 149/259 (57%), Gaps = 57/259 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPNPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LV+D+T++KSF+N+ W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D E +TT
Sbjct: 121 GNKSD---WEEKRAVTT------------------------------------------- 134
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK------TSGRDPLEAP 234
+GE +A+E G+ ++ETSAK+N N+E+AF LA + + + P A
Sbjct: 135 -----EQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQASPAAAA 189
Query: 235 DRVTIDKKPDRGGMAGGCC 253
V ++ P G GGCC
Sbjct: 190 GNVNVNSAPKSGAAGGGCC 208
>gi|307212138|gb|EFN87994.1| Ras-related protein Rab-8A [Harpegnathos saltator]
Length = 209
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 99/118 (83%), Positives = 113/118 (95%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
DTAGQERF TITT+YYRGAMGIMLVYD+TN+KSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLG 120
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/133 (52%), Positives = 90/133 (67%), Gaps = 19/133 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ------- 177
DTAGQERF TITT+YYRGAMGIMLVYD+TN+KSF+NI W+RNI+E+A+ D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTNDKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 178 ---VVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+ V K RGE +A EYG++FMETSAK++IN+E+AF LA I K + LEA
Sbjct: 123 CELIDKRQVTKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKK--LEAS 180
Query: 235 DRVTIDKKPDRGG 247
+ P +GG
Sbjct: 181 N-------PPKGG 186
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 62/261 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
++ YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 SRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPTA--- 142
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E F +A I + + D + D
Sbjct: 143 -----KGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQRLAESD---SKPEAAKDA 194
Query: 242 KPDRGGMAG---------GCC 253
KPD +AG CC
Sbjct: 195 KPDVKLLAGNAQTKPASASCC 215
>gi|359806992|ref|NP_001241076.1| uncharacterized protein LOC100816795 [Glycine max]
gi|255638007|gb|ACU19319.1| unknown [Glycine max]
Length = 216
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 111/254 (43%), Positives = 151/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L K+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN-QPDQ 200
Query: 246 GGMAG------GCC 253
G CC
Sbjct: 201 ATSGGQPAQKSACC 214
>gi|389628708|ref|XP_003712007.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|351644339|gb|EHA52200.1| GTP-binding protein ypt2 [Magnaporthe oryzae 70-15]
gi|440471122|gb|ELQ40157.1| GTP-binding protein SAS1 [Magnaporthe oryzae Y34]
gi|440483228|gb|ELQ63646.1| GTP-binding protein SAS1 [Magnaporthe oryzae P131]
Length = 206
Score = 213 bits (543), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 155/257 (60%), Gaps = 55/257 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA + YD L KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KL
Sbjct: 1 MANRNYDVLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W E+ + V+
Sbjct: 121 GNKCD--------------------------------------W---------EEKRAVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
+ +G+A+A E G+ F+E SAK NINI+KAF LA+ I +T + + P V +
Sbjct: 134 T----EQGQALADELGIPFLEVSAKGNINIDKAFYSLASDIKKRTIDTQKDFQNPGSVNV 189
Query: 240 D---KKPDRGGMAGGCC 253
+ + GGM G CC
Sbjct: 190 NAGAQGNSAGGMGGKCC 206
>gi|388506566|gb|AFK41349.1| unknown [Medicago truncatula]
Length = 214
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 151/252 (59%), Gaps = 54/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQDSAT 201
Query: 246 G-GMAG---GCC 253
G G A CC
Sbjct: 202 GSGQAAQKSACC 213
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/261 (43%), Positives = 153/261 (58%), Gaps = 62/261 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPTA--- 142
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E F +A I + + D + +
Sbjct: 143 -----KGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQRLAETD---SKPEAAKNA 194
Query: 242 KPDRGGMAG---------GCC 253
KPD +AG CC
Sbjct: 195 KPDVKLLAGNSQQKPASSSCC 215
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 153/259 (59%), Gaps = 58/259 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPNPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LV+D+T++KSF+N+ W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W E+ + V
Sbjct: 121 GNKSD--------------------------------------W---------EEKRAVT 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK------TSGRDPLEAP 234
+ +GE +ARE G+ ++ETSAK+N N+E+AF LA + + + P A
Sbjct: 134 T----EQGEELARELGIPYIETSAKSNANVEEAFFHLAREVKTRLIDTAAVTQASPAAAT 189
Query: 235 DRVTIDKKPDRGGMAGGCC 253
V ++ P + G AGGCC
Sbjct: 190 GNVNVNSAP-KTGAAGGCC 207
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 213 bits (542), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 153/255 (60%), Gaps = 71/255 (27%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L+GK+IKLQIWDT
Sbjct: 15 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 74
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA E V KM++G D
Sbjct: 75 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNKCD 134
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +VV+S
Sbjct: 135 LP-----------------------------------------------EKKVVDS---- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-------------TSGRDPLE 232
RG+A+A E+G++F+ETSAK +IN+E+AFI LA I + T+G L
Sbjct: 144 SRGKALADEHGIKFLETSAKNSINVEEAFISLAKDIKKRIIDNKDELVSNPQTNGTQNLG 203
Query: 233 APDRVTIDKKPDRGG 247
AP KP GG
Sbjct: 204 AP-------KPKTGG 211
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 150/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T+++ GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F E SAK N+N+E+ F +A I + + D P + I+++
Sbjct: 142 SKGQALADEYGIKFFEASAKTNMNVEEVFFSIAKDIKQRLAETDSKTEPQTIKINQQEQG 201
Query: 246 GGMAG-----GCC 253
G + CC
Sbjct: 202 AGTSAASQKSACC 214
>gi|15231322|ref|NP_190192.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|145332765|ref|NP_001078248.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|186510716|ref|NP_001118780.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|297815758|ref|XP_002875762.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|114088|sp|P28186.1|RAE1C_ARATH RecName: Full=Ras-related protein RABE1c; Short=AtRABE1c; AltName:
Full=Ras-related protein Ara-3; AltName:
Full=Ras-related protein Rab8A; Short=AtRab8A
gi|217837|dbj|BAA00830.1| small GTP-binding protein [Arabidopsis thaliana]
gi|7798994|emb|CAB90933.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14334918|gb|AAK59637.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|14596015|gb|AAK68735.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25054949|gb|AAN71951.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|25084212|gb|AAN72197.1| GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|297321600|gb|EFH52021.1| hypothetical protein ARALYDRAFT_484985 [Arabidopsis lyrata subsp.
lyrata]
gi|332644585|gb|AEE78106.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644586|gb|AEE78107.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
gi|332644587|gb|AEE78108.1| Ras-related protein ARA-3 [Arabidopsis thaliana]
Length = 216
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 150/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F + I + S D P + I + D+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKI-SQTDQ 200
Query: 246 GGMAG------GCC 253
AG CC
Sbjct: 201 AAGAGQATQKSACC 214
>gi|312283527|dbj|BAJ34629.1| unnamed protein product [Thellungiella halophila]
Length = 216
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 150/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F + I + S D P + I + D+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDARAEPATIRI-SQTDQ 200
Query: 246 GGMAG------GCC 253
AG CC
Sbjct: 201 AAGAGQATQKSACC 214
>gi|444728498|gb|ELW68955.1| Ras-related protein Rab-30 [Tupaia chinensis]
Length = 263
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 108/231 (46%), Positives = 156/231 (67%), Gaps = 11/231 (4%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ + YDFLFK++LIG++GVGKTC++ RF+ F +TIG+DF IKTV++ G+K+KL
Sbjct: 1 MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF +IT SYYR A ++L YDIT E+SF + +WLR I+++A+ V ++L
Sbjct: 61 QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV- 179
+ DTAGQERF +IT SYYR A ++L YDIT E+SF + +WLR I+++A+ V
Sbjct: 121 -QIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVL 179
Query: 180 ---------NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
V + R E + + ++ETSAK + N+EK F++LA +
Sbjct: 180 VGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLACRL 230
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/259 (43%), Positives = 153/259 (59%), Gaps = 58/259 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPNPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LV+D+T++KSF+N+ W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W E+ + V
Sbjct: 121 GNKSD--------------------------------------W---------EEKRAVT 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK------TSGRDPLEAP 234
+ +GE +A+E G+ ++ETSAK+N N+E+AF LA + + + P A
Sbjct: 134 T----EQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQASPAAAS 189
Query: 235 DRVTIDKKPDRGGMAGGCC 253
V ++ P GG AGGCC
Sbjct: 190 ANVNVNSAPKTGG-AGGCC 207
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 213 bits (541), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 153/256 (59%), Gaps = 61/256 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD + T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +P+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSKAEPSTLKIN-QPEA 200
Query: 246 GGMAGG--------CC 253
G AGG CC
Sbjct: 201 G--AGGSQTSQKSACC 214
>gi|427777947|gb|JAA54425.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 209
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 115/215 (53%), Positives = 137/215 (63%), Gaps = 51/215 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YDFLFKLLLIGDSGVGKT +LFRFSD+ F+ +FISTIGIDFKI+ +++ GKKIKLQIW
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+T E +F+NI W+RN DEHA DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIKTWIRNTDEHAAADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CDM----------------------------------------------NELRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
K RGE +A E+ ++FMETSA ++IN+E+AF LA
Sbjct: 132 SKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLA 166
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 150/252 (59%), Gaps = 54/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP--DRVTIDKKP 243
+G+A+A EYG++F ETSAK N N+E+ F +A I + S D P ++ +D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLSDTDTKAEPATSKIHLDQAS 201
Query: 244 DRGGMA--GGCC 253
G A CC
Sbjct: 202 GAGPAAQKSACC 213
>gi|388498114|gb|AFK37123.1| unknown [Lotus japonicus]
Length = 212
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 150/250 (60%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETS K N+N+E+ +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSTKTNLNVEEVLFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 GGMA--GGCC 253
A CC
Sbjct: 201 PAAAQNSTCC 210
>gi|357510455|ref|XP_003625516.1| Ras-like protein [Medicago truncatula]
gi|355500531|gb|AES81734.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 148/239 (61%), Gaps = 51/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKIN-QPD 199
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 153/259 (59%), Gaps = 58/259 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPNPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LV+D+T++KSF+N+ W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVRTWHANIEQHASEGVSKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W E+ + V+
Sbjct: 121 GNKSD--------------------------------------W---------EEKRAVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK------TSGRDPLEAP 234
+ +GE +ARE G+ ++ETSAK+N N+E+AF LA + + + P A
Sbjct: 134 T----EQGEELARELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTAAVTQASPAAAA 189
Query: 235 DRVTIDKKPDRGGMAGGCC 253
V ++ P + G GGCC
Sbjct: 190 GNVNVNSAP-KSGATGGCC 207
>gi|363807324|ref|NP_001242369.1| uncharacterized protein LOC100775804 [Glycine max]
gi|255647140|gb|ACU24038.1| unknown [Glycine max]
Length = 214
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 152/254 (59%), Gaps = 58/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y +L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YVYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++ D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPSTIKINQ--DQ 199
Query: 246 GGMAG------GCC 253
G AG CC
Sbjct: 200 SGGAGQAAQKSACC 213
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 152/257 (59%), Gaps = 55/257 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPTA--- 142
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP-LEAPDRVTID 240
+G+A+A E+G++F ETSAK N+N+E F +A I + + D E P +
Sbjct: 143 -----KGQALADEFGIKFFETSAKTNMNVEDVFFTIARDIKQRLAETDSKPEQPAKAAPG 197
Query: 241 KKPDRGG----MAGGCC 253
K GG AG C
Sbjct: 198 VKLSAGGAQPKAAGSSC 214
>gi|449459908|ref|XP_004147688.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
gi|449525132|ref|XP_004169573.1| PREDICTED: ras-related protein RABE1c-like [Cucumis sativus]
Length = 216
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/236 (45%), Positives = 146/236 (61%), Gaps = 50/236 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+K
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKINK 197
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 157/253 (62%), Gaps = 57/253 (22%)
Query: 5 TYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWD 64
+YD+L KLLLIGDSGVGK+C+L RFSDD+F +FI+TIGIDFKI+T++L GK+IKLQIWD
Sbjct: 8 SYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 67
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
TAGQERF TITT+YYRGAMGI+L YD+T+E+SF+NI W+RNI++HA+E V K+++G
Sbjct: 68 TAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRNWIRNIEQHASEGVNKILIGNKC 127
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D IL D +V++
Sbjct: 128 D-----------------------------------IL------------DKKVIS---- 136
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI----YDKTSGRDPLEAPDRVTID 240
K +G+A+A E+G++F+ETSAK+NI +E+AF LA I D + L+ V ++
Sbjct: 137 KEQGQALADEHGIKFLETSAKSNIGVEEAFYMLARDIKKRLIDTAQEKTDLKTAGNVNVN 196
Query: 241 KKPDRGGMAGGCC 253
+K + GCC
Sbjct: 197 QKGN--AATAGCC 207
>gi|871506|emb|CAA90081.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 151/252 (59%), Gaps = 55/252 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDTA
Sbjct: 13 DYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTA 72
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 73 GQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD- 131
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+DE P
Sbjct: 132 -----------------------------------------MDESKRAVP--------TS 142
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK--PD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+++
Sbjct: 143 KGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKSEPQTIKINQQDPAA 202
Query: 245 RGGMAG---GCC 253
GG A CC
Sbjct: 203 NGGQAATKSACC 214
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 148/250 (59%), Gaps = 51/250 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W ED +VV++
Sbjct: 125 CD--------------------------------------W---------EDRRVVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
RG+ +A E G+ F+E SAK+NIN+EKAF LA+ I + +A +D
Sbjct: 136 --ERGQQLADELGIPFLEVSAKSNINVEKAFYSLASDIKKRIIDTAKTDASASQGVDVGA 193
Query: 244 DRGGMAGGCC 253
G G CC
Sbjct: 194 QGSGSGGKCC 203
>gi|449448661|ref|XP_004142084.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
gi|449502574|ref|XP_004161681.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 148/239 (61%), Gaps = 51/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPD 199
>gi|297265583|ref|XP_002799218.1| PREDICTED: ras-related protein Rab-10-like [Macaca mulatta]
Length = 188
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/109 (94%), Positives = 106/109 (97%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDE 109
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDE
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE 109
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 89/131 (67%), Gaps = 8/131 (6%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDE + + S
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEVRPRN--LFLSLFK 121
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
R + IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 122 LQREKNIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVDISSG 177
Query: 245 RG--GMAGGCC 253
G G CC
Sbjct: 178 GGVTGWKSKCC 188
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 150/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
G+A+A EYG++F ETSAK N+N+E+ F +A I + + P + I+++
Sbjct: 142 SEGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTVSSTEPQSIKINQQDQA 201
Query: 245 -RGGMAG---GCC 253
GG A CC
Sbjct: 202 ANGGQAAQKSACC 214
>gi|1370196|emb|CAA98175.1| RAB8D [Lotus japonicus]
Length = 214
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 151/252 (59%), Gaps = 54/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI WLRNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWLRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDHKAEPTTLKINQDSAA 201
Query: 246 G-GMAG---GCC 253
G G A CC
Sbjct: 202 GAGEAANKSSCC 213
>gi|18447921|dbj|BAB84326.1| ras-related protein RAB8-5 [Nicotiana tabacum]
Length = 216
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 149/243 (61%), Gaps = 51/243 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L K+IKLQ
Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDSKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPT---- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+
Sbjct: 142 ----SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLAESDSKAEPQTIRIN- 196
Query: 242 KPD 244
+PD
Sbjct: 197 QPD 199
>gi|327505553|gb|AEA92304.1| Rab2 [Hevea brasiliensis]
Length = 216
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/239 (45%), Positives = 148/239 (61%), Gaps = 51/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPTTIKIN-QPD 199
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 44 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 103
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 104 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 163
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 164 CDMEAKRK---------------------------------------------------V 172
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 173 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKT 232
Query: 239 IDKK 242
DKK
Sbjct: 233 CDKK 236
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 143/225 (63%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQTWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K R + +ARE+G+RF ETSAK++ N+++AF LA I K+ R
Sbjct: 132 QKERADKLAREHGIRFFETSAKSSTNVDEAFSSLARDILHKSGAR 176
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 143/225 (63%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD+ GKKIKLQ+W
Sbjct: 28 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKIKLQVW 87
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 88 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 147
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 148 CDMEAKRK---------------------------------------------------V 156
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR
Sbjct: 157 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 201
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLGNSNKPHSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|308485078|ref|XP_003104738.1| CRE-RAB-8 protein [Caenorhabditis remanei]
gi|308257436|gb|EFP01389.1| CRE-RAB-8 protein [Caenorhabditis remanei]
Length = 211
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/122 (80%), Positives = 112/122 (91%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA DVE+MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/110 (58%), Positives = 80/110 (72%), Gaps = 10/110 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED-PQVVNSWV 183
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA D +++
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 184 C---------KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
C + RGE +A EYG +F+ETSAKAN+NI++AF LA I K
Sbjct: 123 CDIEERREVSRERGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSK 172
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 5 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 65 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 125 CDMEAKRK---------------------------------------------------V 133
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 134 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLKT 193
Query: 239 IDKK 242
DKK
Sbjct: 194 CDKK 197
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 151/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++ GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+E +VV +
Sbjct: 132 M----------------------------------------------DESKRVVPT---- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK ++N+E+ F +A I + + D P + ID + D+
Sbjct: 142 SKGQALADEYGIKFFETSAKTDLNVEEVFFSIARDIKQRLADTDSKAEPAGIKIDNQKDQ 201
Query: 246 G-----GMAGGCC 253
CC
Sbjct: 202 ATAGEVAQKSACC 214
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 148/253 (58%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F + I + + D P + I+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLAETDSKAEPHTIRINPPDHA 201
Query: 246 GGMA-----GGCC 253
G A CC
Sbjct: 202 AGSAETPAKSACC 214
>gi|268560906|ref|XP_002646318.1| C. briggsae CBR-RAB-8 protein [Caenorhabditis briggsae]
Length = 211
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/122 (80%), Positives = 112/122 (91%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA DVE+MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 11/133 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED-PQVVNSWV 183
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA D +++
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 184 C---------KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
C + RGE +A EYG +F+ETSAKAN+NI++AF LA I K ++ + A
Sbjct: 123 CDIEERREVSRERGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKME-QNEMRAG 181
Query: 235 DRVTIDKKPDRGG 247
+ + + GG
Sbjct: 182 GSASNTGRVNVGG 194
>gi|258577751|ref|XP_002543057.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
gi|237903323|gb|EEP77724.1| GTP-binding protein SAS1 [Uncinocarpus reesii 1704]
Length = 205
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 153/252 (60%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L+GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKK 242
+G+ +A E G+ F+E SAK NIN++KAF LA+ I + + A V+ID+
Sbjct: 136 --EQGQQLANELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTSKAEQSASHNVSIDQG 193
Query: 243 PDRG-GMAGGCC 253
G G+A CC
Sbjct: 194 SGSGAGLANKCC 205
>gi|341875743|gb|EGT31678.1| hypothetical protein CAEBREN_09245 [Caenorhabditis brenneri]
gi|341876669|gb|EGT32604.1| hypothetical protein CAEBREN_03557 [Caenorhabditis brenneri]
Length = 211
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/122 (80%), Positives = 112/122 (91%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA DVE+MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 90/133 (67%), Gaps = 11/133 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED-PQVVNSWV 183
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA D +++
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIGNK 122
Query: 184 C---------KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
C + RGE +A EYG +F+ETSAKAN+NI++AF LA I K ++ + A
Sbjct: 123 CDIEERREVSRERGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKME-QNEMRAG 181
Query: 235 DRVTIDKKPDRGG 247
V+ + + GG
Sbjct: 182 GSVSNTGRVNVGG 194
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 150/253 (59%), Gaps = 56/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D + DR KP+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDS-KTEDRTIKINKPEG 200
Query: 246 GGMA-----GGCC 253
A CC
Sbjct: 201 DAEATTSQKSACC 213
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 150/245 (61%), Gaps = 58/245 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TVD++GK+IKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ + E +ARE+ +RF ETSAK+++N+++AF LA I KT GR R + KP
Sbjct: 132 QREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGR-------RSGTNSKP 184
Query: 244 DRGGM 248
G+
Sbjct: 185 SSTGL 189
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/240 (46%), Positives = 147/240 (61%), Gaps = 51/240 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D+FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 93 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVW 152
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 153 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 212
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 213 CDMEAKRK---------------------------------------------------V 221
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K + +ARE+G+RF ETSAK++ N+++AF LA I K+ GR + D KP
Sbjct: 222 QKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKSGGRRSGNSHKAPGTDLKP 281
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 150/245 (61%), Gaps = 58/245 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TVD++GK+IKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ + E +ARE+ +RF ETSAK+++N+++AF LA I KT GR R + KP
Sbjct: 132 QREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGR-------RSGTNSKP 184
Query: 244 DRGGM 248
G+
Sbjct: 185 SSTGL 189
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 146/228 (64%), Gaps = 52/228 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YDFLFKLLLIGDSGVGKTC++ RF++D +NTT+ISTIGIDFK+KT+++ GKK+KL
Sbjct: 1 MAKK-YDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKL 59
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
Q+WDTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ V +M+L
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAGVTRMLL 119
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + +
Sbjct: 120 GNKCDVEAKRK------------------------------------------------- 130
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
V K GE +A+E+ +RF ETSAK++IN+E++F LA I K++ +
Sbjct: 131 --VSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQKSTKK 176
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 150/253 (59%), Gaps = 56/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D + DR KP+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDS-KTEDRTIKINKPEG 200
Query: 246 GGMA-----GGCC 253
A CC
Sbjct: 201 DAEATTLQKSACC 213
>gi|156383574|ref|XP_001632908.1| predicted protein [Nematostella vectensis]
gi|156219971|gb|EDO40845.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/163 (63%), Positives = 125/163 (76%), Gaps = 5/163 (3%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA K D FKLLLIGDSGVGKTC++FRF+D+ FN +FISTIGIDFKIKT++L GKKIKL
Sbjct: 1 MANKKSDLFFKLLLIGDSGVGKTCIIFRFADNTFNPSFISTIGIDFKIKTLELGGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITT+YYRGAMGIMLVYD+TNEKSF NI KWL+ ID+HANEDV++M++
Sbjct: 61 QIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLV 120
Query: 121 GKTKD-----TAGQERFHTITTSYYRGAMGIMLVYDITNEKSF 158
G D Q + + +SY + + +I EKSF
Sbjct: 121 GNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSF 163
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 79/109 (72%), Gaps = 10/109 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERFHTITT+YYRGAMGIMLVYD+TNEKSF NI KWL+ ID+HANED + +
Sbjct: 64 DTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRMLVGNK 123
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD 223
+ + +GE +A YG+ F+ETSA +NIN+EK+F+ L I +
Sbjct: 124 CDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILN 172
>gi|1370194|emb|CAA98174.1| RAB8C [Lotus japonicus]
Length = 212
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 150/250 (60%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQER TITT+YYRGA GI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERVRTITTAYYRGAKGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD+
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPQTIKIN-QPDQ 200
Query: 246 GGMA--GGCC 253
A CC
Sbjct: 201 PAAAQNSTCC 210
>gi|388519291|gb|AFK47707.1| unknown [Lotus japonicus]
Length = 214
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 151/252 (59%), Gaps = 54/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK++KLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRVKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDHRAEPTTLKINQDSAA 201
Query: 246 G-GMAG---GCC 253
G G A CC
Sbjct: 202 GAGEAANKSSCC 213
>gi|56754975|gb|AAW25670.1| SJCHGC06150 protein [Schistosoma japonicum]
gi|226470410|emb|CAX70485.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485751|emb|CAX75295.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485753|emb|CAX75296.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485755|emb|CAX75297.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 117/238 (49%), Positives = 145/238 (60%), Gaps = 53/238 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK+YD LFKLLLIGDSGVGKTC+L R+ D +++ +FISTIGIDFKIKT++L+GKKIKL
Sbjct: 1 MAKKSYDALFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIM++YDITN ++FDNI W++NI ++A+EDVEK+++
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMMIYDITNRRTFDNIQTWMKNICDYASEDVEKLVV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G N+ FDN
Sbjct: 121 G--------------------------------NKCDFDN-------------------R 129
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVT 238
V G AR + ++F+ETSA N+ KAF EL AI KT R P VT
Sbjct: 130 RAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTRG--HEPSTVT 185
>gi|17737663|ref|NP_524172.1| Rab8, isoform A [Drosophila melanogaster]
gi|386771441|ref|NP_001246837.1| Rab8, isoform C [Drosophila melanogaster]
gi|194751943|ref|XP_001958283.1| GF10843 [Drosophila ananassae]
gi|194874419|ref|XP_001973397.1| GG13365 [Drosophila erecta]
gi|195354284|ref|XP_002043628.1| GM15893 [Drosophila sechellia]
gi|195496110|ref|XP_002095554.1| GE22459 [Drosophila yakuba]
gi|195591647|ref|XP_002085550.1| GD12244 [Drosophila simulans]
gi|2313045|dbj|BAA21711.1| rab8 [Drosophila melanogaster]
gi|7293732|gb|AAF49101.1| Rab8, isoform A [Drosophila melanogaster]
gi|17862678|gb|AAL39816.1| LD44762p [Drosophila melanogaster]
gi|40788410|dbj|BAD07038.1| Rab8 [Drosophila melanogaster]
gi|190625565|gb|EDV41089.1| GF10843 [Drosophila ananassae]
gi|190655180|gb|EDV52423.1| GG13365 [Drosophila erecta]
gi|194127796|gb|EDW49839.1| GM15893 [Drosophila sechellia]
gi|194181655|gb|EDW95266.1| GE22459 [Drosophila yakuba]
gi|194197559|gb|EDX11135.1| GD12244 [Drosophila simulans]
gi|220946338|gb|ACL85712.1| Rab8-PA [synthetic construct]
gi|220956084|gb|ACL90585.1| Rab8-PA [synthetic construct]
gi|383292017|gb|AFH04508.1| Rab8, isoform C [Drosophila melanogaster]
Length = 207
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/118 (83%), Positives = 111/118 (94%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L KKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLG 120
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 88/129 (68%), Gaps = 10/129 (7%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGE +A EYG++FMETSAKA+IN+E+AF+ LA+ I KT R P
Sbjct: 123 CELTDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEANNP 182
Query: 235 DRVTIDKKP 243
+ KP
Sbjct: 183 PKGGHQLKP 191
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 150/257 (58%), Gaps = 61/257 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++L K+IKLQIWDT
Sbjct: 10 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIKLQIWDT 69
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 70 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 129
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R V
Sbjct: 130 MDPSKR--------------------------------------------------AVPF 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+G+A+A EYG++F ETSAK N+N+E F +A I + + D PD KPD
Sbjct: 140 AKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTRLAESD--SKPDAKNAAGKPDV 197
Query: 245 ---RGG-----MAGGCC 253
GG +G CC
Sbjct: 198 KLTPGGAQQKPASGSCC 214
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 148/240 (61%), Gaps = 51/240 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GK+IKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + D KP
Sbjct: 132 LKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLKP 191
>gi|396491326|ref|XP_003843542.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
gi|312220121|emb|CBY00063.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
Length = 206
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 151/255 (59%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 GSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+++SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDQRSFENIRTWFSNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ + V++
Sbjct: 123 NKCD--------------------------------------W---------EEKRAVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID- 240
+G+A+A E G+ F+E SAK+NIN++KAF LA+ I + + P +D
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDTARTDQPQAAKVDV 191
Query: 241 --KKPDRGGMAGGCC 253
+ D GM G CC
Sbjct: 192 GGQGGDNAGMGGKCC 206
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 150/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|195173155|ref|XP_002027359.1| GL15675 [Drosophila persimilis]
gi|198465444|ref|XP_002134976.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
gi|194113202|gb|EDW35245.1| GL15675 [Drosophila persimilis]
gi|198150162|gb|EDY73603.1| GA23499 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/118 (83%), Positives = 111/118 (94%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L KKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLG 120
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/133 (54%), Positives = 92/133 (69%), Gaps = 19/133 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDIT EKSF+NI W+RNI+E+A+ D + +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEKMLLGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K RGE +A EYG++FMETSAKA+IN+E+AF+ LA+ I KT R +EA
Sbjct: 123 CELHDKRQVSKERGEQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKR--MEAN 180
Query: 235 DRVTIDKKPDRGG 247
+ P +GG
Sbjct: 181 N-------PPKGG 186
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 147/252 (58%), Gaps = 54/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 73 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLIGNKAD 132
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R V
Sbjct: 133 MDESKR--------------------------------------------------AVST 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK---- 241
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D + I+K
Sbjct: 143 AQGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPEDQTIKINKTGQG 202
Query: 242 KPDRGGMAGGCC 253
D CC
Sbjct: 203 SEDPESQKSACC 214
>gi|380494610|emb|CCF33020.1| Ras-like protein Rab-8A [Colletotrichum higginsianum]
Length = 202
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 150/250 (60%), Gaps = 52/250 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ +VV++
Sbjct: 125 CD--------------------------------------W---------EEKRVVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
RG+ +A E G+ F+E SAK+NINI+KAF LA I + E P ++
Sbjct: 136 --ERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPAASGVN-VG 192
Query: 244 DRGGMAGGCC 253
++GG G CC
Sbjct: 193 EQGGAGGKCC 202
>gi|1654144|gb|AAB17726.1| small GTP-binding protein rab [Brassica rapa subsp. campestris]
Length = 222
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 149/250 (59%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI---DKK 242
+G+A+A EYG++F ETSAK N+N+E+ F + I + S D P + I D++
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIRISQTDQE 201
Query: 243 PDRGGMAGGC 252
D G C
Sbjct: 202 LDCAGHTEVC 211
>gi|320590560|gb|EFX03003.1| rab GTPase [Grosmannia clavigera kw1407]
Length = 205
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 151/254 (59%), Gaps = 53/254 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 GNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +V+++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVIST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--SGRDPLEAPDRVTI 239
RG+ +A E G+ F+E SAK+ INI+KAF LA+ I + + + A V +
Sbjct: 136 ----ERGQQLADELGIPFLEVSAKSGINIDKAFYNLASDIKTRIVDTAKTEQTASAGVNV 191
Query: 240 DKKPDRGGMAGGCC 253
+ D G+ G CC
Sbjct: 192 NSSGDSNGLGGKCC 205
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDF+I+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 143/225 (63%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR
Sbjct: 132 QKEQANKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 176
>gi|388518593|gb|AFK47358.1| unknown [Medicago truncatula]
Length = 216
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 147/239 (61%), Gaps = 51/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TI T+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTIITAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKSEPQTIKIN-QPD 199
>gi|119179533|ref|XP_001241343.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303320893|ref|XP_003070441.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240110137|gb|EER28296.1| Ras family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320033061|gb|EFW15010.1| GTP-binding protein SAS1 [Coccidioides posadasii str. Silveira]
gi|392866739|gb|EAS30086.2| GTP-binding protein ypt2 [Coccidioides immitis RS]
Length = 205
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 152/252 (60%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T+DL GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLGGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKK 242
+G+ +A E G+ F+E SAK NIN++KAF LA+ I + + A V+ID+
Sbjct: 136 --EQGQQLADELGIPFLEVSAKNNINVDKAFYTLASEIKKVMDTSKAEQSASHNVSIDQG 193
Query: 243 PDRG-GMAGGCC 253
G G+A CC
Sbjct: 194 TGSGTGLANKCC 205
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 152/252 (60%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKK 242
+G+ +A E G+ F+E SAK NIN+EKAF LA+ I +A + VTID +
Sbjct: 136 --EQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTNKSEQAGSQGVTIDHQ 193
Query: 243 -PDRGGMAGGCC 253
+G + G CC
Sbjct: 194 GAGQGNLGGKCC 205
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/253 (43%), Positives = 150/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++ GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+E +VV +
Sbjct: 132 M----------------------------------------------DESKRVVPT---- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ + D
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKAEPAGIKINNQLDH 201
Query: 246 G-----GMAGGCC 253
CC
Sbjct: 202 ATAGEVAQKSACC 214
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 115/256 (44%), Positives = 157/256 (61%), Gaps = 57/256 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T+DL GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIDLDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFANVEQHASEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ +VV++
Sbjct: 125 CD--------------------------------------W---------EEKRVVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--SGRDPLEAPDRVT--- 238
+G+A+A E G+ F+E SAKANINIEKAF LA+ + + S ++ A +
Sbjct: 136 --EQGQALADELGIPFLEVSAKANINIEKAFYSLASDVKKRLIDSSKETGAATGNQSAGG 193
Query: 239 IDKKPDRG-GMAGGCC 253
++ ++G G+ G CC
Sbjct: 194 VNVAQNQGAGVGGKCC 209
>gi|224054837|ref|XP_002298373.1| predicted protein [Populus trichocarpa]
gi|222845631|gb|EEE83178.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 144/234 (61%), Gaps = 50/234 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDTRAEPTTLKI 195
>gi|115456231|ref|NP_001051716.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|29124128|gb|AAO65869.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
gi|46392555|gb|AAS91045.1| small GTP-binding protein [Oryza sativa Japonica Group]
gi|108711784|gb|ABF99579.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
gi|113550187|dbj|BAF13630.1| Os03g0819900 [Oryza sativa Japonica Group]
gi|215767248|dbj|BAG99476.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767292|dbj|BAG99520.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218193994|gb|EEC76421.1| hypothetical protein OsI_14091 [Oryza sativa Indica Group]
gi|222626056|gb|EEE60188.1| hypothetical protein OsJ_13134 [Oryza sativa Japonica Group]
Length = 214
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 147/239 (61%), Gaps = 52/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P+ TI K +
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSETDS--KPEDRTIKIKSE 198
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 143/225 (63%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ V++++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVQRLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + R V
Sbjct: 123 CDMEAKRR---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K + + +ARE+G+RF ETSAK++ N+++AF LA I K+ GR
Sbjct: 132 RKEQADQLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKSGGR 176
>gi|388495854|gb|AFK35993.1| unknown [Medicago truncatula]
Length = 216
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 147/239 (61%), Gaps = 51/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGV K+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVSKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNMEEVFFSIARDIKQRLADTDSKSEPQTIKIN-QPD 199
>gi|189204310|ref|XP_001938490.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330920200|ref|XP_003298922.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
gi|187985589|gb|EDU51077.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311327651|gb|EFQ92986.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
Length = 206
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/257 (45%), Positives = 155/257 (60%), Gaps = 58/257 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 GSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ + V++
Sbjct: 123 NKCD--------------------------------------W---------EEKRAVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVT 238
+G+A+A E G+ F+E SAK+NIN++KAF LA+ I + T+ D AP +V
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDTARTDQTAAP-KVD 190
Query: 239 IDKKPDRG--GMAGGCC 253
+ PD G GM G CC
Sbjct: 191 VG-GPDSGNAGMGGKCC 206
>gi|46123663|ref|XP_386385.1| hypothetical protein FG06209.1 [Gibberella zeae PH-1]
gi|408398160|gb|EKJ77294.1| hypothetical protein FPSE_02569 [Fusarium pseudograminearum CS3096]
Length = 203
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 155/254 (61%), Gaps = 55/254 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W +N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--SGRDPLEAPDRVTI 239
+G+A+A E G+ F+E SAK+NINI+KAF LA I + + ++ A V +
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNDQPAASGVNV 191
Query: 240 DKKPDRGGMAGGCC 253
+ K + GG CC
Sbjct: 192 NDKSESGGSK--CC 203
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/240 (46%), Positives = 146/240 (60%), Gaps = 51/240 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I EHA+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEHASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + R V
Sbjct: 123 CDMEAKRR---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K + + +A+E+G+RF ETSAK+++N+ +AF LA I K+ R + D KP
Sbjct: 132 QKEQADKLAQEHGIRFFETSAKSSVNVAEAFSSLARDILLKSGSRRRGNDNKPPSTDLKP 191
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 152/252 (60%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKK 242
+G+ +A E G+ F+E SAK NIN+EKAF LA+ I +A + VTID +
Sbjct: 136 --EQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAGSQGVTIDHQ 193
Query: 243 -PDRGGMAGGCC 253
+G + G CC
Sbjct: 194 GAGQGNLGGKCC 205
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 150/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ R + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGSRRSGNSNKSPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 149/253 (58%), Gaps = 53/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA K+YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MATKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+L+YD+T+EKSF+NI W N+++HA+E+V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDEKSFENIRTWFSNVEQHASENVFKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D Q +
Sbjct: 121 GNKCDCEEQRQ------------------------------------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V +G+A+A E G++F+E SAK N+N+++AF LA I + + + ID
Sbjct: 132 --VTYEQGQALAEELGIKFLEASAKTNVNVDEAFFTLAREIKKQKIDAEQESSAQASNID 189
Query: 241 KKPDRGGMAGGCC 253
R + CC
Sbjct: 190 LSSSRN--SKRCC 200
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 154/250 (61%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++ +GK++KLQIWDT
Sbjct: 11 YDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIEQEGKRLKLQIWDT 70
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W+R I +HA+++V K+++G D
Sbjct: 71 AGQERFRTITTAYYRGAMGILLVYDVTDEQSFNNIRNWMRQIQQHASDNVNKILIGNKCD 130
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ML D +V+ +
Sbjct: 131 ---------------------ML--------------------------DKKVIET---- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
RG+A+A E+G++F ETSAK NIN+EKAF E+A + + ++ + +
Sbjct: 140 ARGQALADEFGIKFFETSAKNNINVEKAFTEIARDVMVRLREQEAKDGGKKGGDTLDLAS 199
Query: 246 GGMAG--GCC 253
GG G GCC
Sbjct: 200 GGKQGKKGCC 209
>gi|226492757|ref|NP_001141136.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|194702826|gb|ACF85497.1| unknown [Zea mays]
gi|195605484|gb|ACG24572.1| ras-related protein ARA-3 [Zea mays]
gi|413932610|gb|AFW67161.1| Ras protein ARA-3 isoform 1 [Zea mays]
gi|413932611|gb|AFW67162.1| Ras protein ARA-3 isoform 2 [Zea mays]
Length = 214
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 145/234 (61%), Gaps = 52/234 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P+ TI
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSETDS--KPEDRTI 193
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ G+ + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGQRSGNGNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>gi|429863036|gb|ELA37621.1| rab GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 202
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 151/252 (59%), Gaps = 52/252 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+ +A E G+ F+E SAK+NINI+KAF LA I + E P ++
Sbjct: 136 ----EKGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPTASGVN- 190
Query: 242 KPDRGGMAGGCC 253
++GG G CC
Sbjct: 191 VGEQGGAGGKCC 202
>gi|242037605|ref|XP_002466197.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
gi|241920051|gb|EER93195.1| hypothetical protein SORBIDRAFT_01g003310 [Sorghum bicolor]
Length = 214
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 145/234 (61%), Gaps = 52/234 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKVLVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P+ TI
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSETDS--KPEDRTI 193
>gi|400597721|gb|EJP65451.1| RAB/GTPase protein [Beauveria bassiana ARSEF 2860]
Length = 206
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 154/252 (61%), Gaps = 54/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 7 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 66
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W +N+++HA E V K+++G
Sbjct: 67 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNK 126
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W ED +V++
Sbjct: 127 CD--------------------------------------W---------EDKRVIS--- 136
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--SGRDPLEAPDRVTIDK 241
+ +G+A+A E G+ F+E SAK+NINI+KAF LA I + + ++ + V +
Sbjct: 137 -EEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNETGSSGGVNVGD 195
Query: 242 KPDRGGMAGGCC 253
K + GGM CC
Sbjct: 196 KTE-GGMGSKCC 206
>gi|407927386|gb|EKG20280.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 208
Score = 209 bits (532), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 153/257 (59%), Gaps = 60/257 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDR---- 236
+G+A+A E G+ F+E SAK+NIN++KAF LA I + T+ DP AP +
Sbjct: 136 --EQGQALADELGIPFLEVSAKSNINVDKAFYSLAADIKKRIIDTARSDP--APGQGQSG 191
Query: 237 VTIDKKPDRGGMAGGCC 253
V + GM G CC
Sbjct: 192 VNVGDSGANAGMGGKCC 208
>gi|226528571|ref|NP_001140371.1| ras-related protein ARA-3 [Zea mays]
gi|194699210|gb|ACF83689.1| unknown [Zea mays]
gi|194703022|gb|ACF85595.1| unknown [Zea mays]
gi|195606220|gb|ACG24940.1| ras-related protein ARA-3 [Zea mays]
gi|195657805|gb|ACG48370.1| ras-related protein ARA-3 [Zea mays]
gi|238005634|gb|ACR33852.1| unknown [Zea mays]
gi|414873636|tpg|DAA52193.1| TPA: Ras protein ARA-3 isoform 1 [Zea mays]
gi|414873637|tpg|DAA52194.1| TPA: Ras protein ARA-3 isoform 2 [Zea mays]
Length = 215
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/234 (47%), Positives = 145/234 (61%), Gaps = 52/234 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
+G+A+A EYG++F ETSAK N+N+E+ F +A I + S D P+ TI
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLSETDS--KPEDRTI 193
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/235 (47%), Positives = 147/235 (62%), Gaps = 57/235 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RFS+D+FN+T+ISTIGIDFKI+T +++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+E+S++NI W+++I E+A VE+M+LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENAAAGVERMLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMENKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR------DPLE 232
K RGE +A+E+G+RF ETSAK++ N+++AF LA I K S R DPL+
Sbjct: 132 PKERGEKLAKEHGIRFFETSAKSSQNVDEAFNTLARDILMKISKRSAPGVKDPLD 186
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 109/225 (48%), Positives = 143/225 (63%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D+FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K + +ARE+G+RF ETSAK++ N+++AF LA I K+ GR
Sbjct: 132 QKEQAVKLAREHGIRFFETSAKSSTNVDEAFSSLARDILLKSGGR 176
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 153/256 (59%), Gaps = 55/256 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD++F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDNSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPT---- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A E+G++F ETSAK N N+E F +A I + + D P + ++
Sbjct: 142 ----EKGQALADEFGIKFFETSAKTNQNVEDVFFTIARDIKQRLAESDAKAEPGNLRLN- 196
Query: 242 KPD--RGGM--AGGCC 253
+PD RG CC
Sbjct: 197 RPDTSRGPHKKEKSCC 212
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 145/225 (64%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D+FN+T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K + +A+E+G+RF ETSAK+++N+++AF LA I K+ GR
Sbjct: 132 RKEQATKLAQEHGIRFFETSAKSSVNVDEAFSCLARDILLKSGGR 176
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 150/257 (58%), Gaps = 61/257 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+T++L K+IKLQIWDT
Sbjct: 10 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKRIKLQIWDT 69
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 70 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 129
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R V
Sbjct: 130 MDPSKR--------------------------------------------------AVPF 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+G+A+A EYG++F ETSAK N+N+E F +A I + + D P+ KPD
Sbjct: 140 AKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTRLAESD--SKPEAKNAGGKPDV 197
Query: 245 ---RGG-----MAGGCC 253
GG +G CC
Sbjct: 198 TLKSGGAQPKPASGSCC 214
>gi|357111103|ref|XP_003557354.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/256 (44%), Positives = 149/256 (58%), Gaps = 55/256 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F +FI+TIGIDFKI+TV+L GK+IKLQ
Sbjct: 8 ARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTASFITTIGIDFKIRTVELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKKALPT---- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG+ F ET AK N+N+E+ F +A I + D + ID
Sbjct: 142 ----SKGQALADEYGIPFFETGAKTNLNVEQVFFSIAKDIKQRLVKTDSKPEDRTIKID- 196
Query: 242 KPDRGGMA----GGCC 253
KP+ G A CC
Sbjct: 197 KPECNGEATASRSACC 212
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 144/225 (64%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TV+++GK+IKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
+ + E +ARE+ +RF ETSAK+++N+++AF LA I KT GR
Sbjct: 132 QREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGR 176
>gi|310792151|gb|EFQ27678.1| Ras family protein [Glomerella graminicola M1.001]
Length = 202
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 150/252 (59%), Gaps = 52/252 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
RG+ +A E G+ F+E SAK+NINI+KAF LA I + E P ++
Sbjct: 136 ----ERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPAASGVN- 190
Query: 242 KPDRGGMAGGCC 253
++ G G CC
Sbjct: 191 VGEQSGAGGKCC 202
>gi|871514|emb|CAA90079.1| small G protein [Pisum sativum]
Length = 215
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 149/253 (58%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGD VGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDRRVGKSCLLLRFSDGSFTTSFIATIGIDFKIRTIELDGKPIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------T 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK--P 243
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I+++
Sbjct: 142 SKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRSEPQTIKINQQDPA 201
Query: 244 DRGGMAG---GCC 253
GG A CC
Sbjct: 202 ANGGQAATKSACC 214
>gi|1619851|gb|AAB16971.1| rab8-like, partial [Caenorhabditis elegans]
Length = 123
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/118 (82%), Positives = 111/118 (94%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA DVE+MI+G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMIIG 120
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 47/53 (88%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERF TITT+YYRGAMGI+LVYDITNE+SF+NI W+RNI+EHA D +
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVE 115
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 108/224 (48%), Positives = 143/224 (63%), Gaps = 51/224 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ G
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGG 175
>gi|255584780|ref|XP_002533108.1| protein with unknown function [Ricinus communis]
gi|223527099|gb|EEF29280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 147/239 (61%), Gaps = 51/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D + I+ +PD
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLADTDSRTESTTLKIN-QPD 199
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/255 (44%), Positives = 150/255 (58%), Gaps = 55/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ + V+
Sbjct: 123 NKCD--------------------------------------W---------EEKRAVS- 134
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVT 238
K +G+A+A E G+ F+E SAKANINIE+AF LA I + TS ++ V
Sbjct: 135 ---KEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTSSKEASGGSSGVN 191
Query: 239 IDKKPDRGGMAGGCC 253
+ G G CC
Sbjct: 192 VADNSGSGS-GGKCC 205
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 149/253 (58%), Gaps = 57/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L K+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILIGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P+ TI
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDS--KPEDKTIKINKTE 199
Query: 246 GGMA-----GGCC 253
GG A CC
Sbjct: 200 GGDAPAASGSACC 212
>gi|66818911|ref|XP_643115.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134236|sp|P20791.1|RAB8B_DICDI RecName: Full=Ras-related protein Rab-8B; AltName: Full=GTP-binding
protein SAS2
gi|167875|gb|AAA33248.1| GTP-binding protein SAS2 [Dictyostelium discoideum]
gi|60471190|gb|EAL69153.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFL KLLLIGDSGVGK+C+L RFSD +F +FI+TIGIDFKI+T++L+GK+IKLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+EKSF +I W+RNI++HA++ V KM++G
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNK-- 129
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K D+
Sbjct: 130 ------------------------CDMTEKKVVDS------------------------- 140
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
RG+++A EYG++F+ETSAK ++N+E+AFI LA I
Sbjct: 141 SRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDI 176
>gi|326490565|dbj|BAJ84946.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 149/253 (58%), Gaps = 57/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L K+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILIGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P+ TI
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDS--KPEDKTIKINKAE 199
Query: 246 GGMA-----GGCC 253
GG A CC
Sbjct: 200 GGDAPAASGSACC 212
>gi|88766387|gb|ABD49713.1| RAB/GTPase [Metarhizium anisopliae]
gi|322700923|gb|EFY92675.1| RAB/GTPase [Metarhizium acridum CQMa 102]
gi|322706646|gb|EFY98226.1| RAB/GTPase [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 152/252 (60%), Gaps = 55/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W +N+++HA E V ++++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNRILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W ED +VV++
Sbjct: 125 CD--------------------------------------W---------EDKRVVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--SGRDPLEAPDRVTIDK 241
+G+A+A E G+ F+E SAK+NINI+KAF LA I + S ++ V +
Sbjct: 136 --EQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDSSKNDQATGTGVNVGD 193
Query: 242 KPDRGGMAGGCC 253
K D GG CC
Sbjct: 194 KTDAGGSK--CC 203
>gi|440633729|gb|ELR03648.1| hypothetical protein GMDG_06296 [Geomyces destructans 20631-21]
Length = 253
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 147/250 (58%), Gaps = 54/250 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 58 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 117
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 118 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNK 177
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W +D + V++
Sbjct: 178 CD--------------------------------------W---------DDKRTVST-- 188
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
RG+A+A E G+ F+E SAKANIN+EKAF LA I + E V + +
Sbjct: 189 --ERGQALADELGIPFLEVSAKANINVEKAFFSLAADIKRRIVDSAKTEESKGVDVAQGS 246
Query: 244 DRGGMAGGCC 253
GG CC
Sbjct: 247 SVGGK---CC 253
>gi|226470408|emb|CAX70484.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/238 (48%), Positives = 144/238 (60%), Gaps = 53/238 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK+YD LFKLLLIGDSGVGKTC+L R+ D +++ +FISTIGIDFKIKT++L+GKKIKL
Sbjct: 1 MAKKSYDALFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMG M++YDITN ++FDNI W++NI ++A+EDVEK+++
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGRMMIYDITNRRTFDNIQTWMKNICDYASEDVEKLVV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G N+ FDN
Sbjct: 121 G--------------------------------NKCDFDN-------------------R 129
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVT 238
V G AR + ++F+ETSA N+ KAF EL AI KT R P VT
Sbjct: 130 RAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTRG--HEPSTVT 185
>gi|145347064|ref|XP_001417998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578226|gb|ABO96291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 205
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 138/213 (64%), Gaps = 50/213 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKIKTV++ GK++KLQIWDT
Sbjct: 3 YDHLLKLLLIGDSGVGKSCLLLRFSDDQFTTSFITTIGIDFKIKTVEIDGKRVKLQIWDT 62
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+++EKSF+N+ W+RNI++HA+ V K+++G D
Sbjct: 63 AGQERFRTITTAYYRGAMGILLVYDVSDEKSFENVRGWMRNIEQHASSSVNKILIGNKCD 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ ++R + K
Sbjct: 123 VSEEKR--------------------------------------------------AITK 132
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
RG+A+A E+G+ F ETSAKA++N+E AF+ +A
Sbjct: 133 ARGQALADEFGIPFFETSAKASVNVEDAFMTIA 165
>gi|14475537|emb|CAC41973.1| putative Rab/GTPase [Glomerella lindemuthiana]
Length = 202
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 149/252 (59%), Gaps = 52/252 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
RG+ +A E G+ F+E SAK+NINI+KAF LA I + E P ++
Sbjct: 136 ----ERGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKNEQPAASGVN- 190
Query: 242 KPDRGGMAGGCC 253
+ G G CC
Sbjct: 191 VGESSGSGGKCC 202
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 143/225 (63%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TVD+ GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG-- 120
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
N+ V V
Sbjct: 121 -------------------------------------------------NKCDMEVKRKV 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K + E +ARE+G+RF ETSAK+++N+++AF LA I K+ R
Sbjct: 132 QKEQAEKLAREHGIRFFETSAKSSLNVDEAFNSLARDILLKSGRR 176
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 151/255 (59%), Gaps = 59/255 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+ NI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D + P + I+ P
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSSKTEPTGIKIN--PQ 199
Query: 245 RGGMAG------GCC 253
G AG CC
Sbjct: 200 DKGSAGEAAQKSACC 214
>gi|154272996|ref|XP_001537350.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|150415862|gb|EDN11206.1| GTP-binding protein SAS1 [Ajellomyces capsulatus NAm1]
gi|225555103|gb|EEH03396.1| GTP-binding protein SAS1 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/252 (45%), Positives = 150/252 (59%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V +
Sbjct: 125 CD--------------------------------------W---------EEKRAVTT-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKK 242
+G+ +A E G+ F+E SAK NIN+EKAF LA+ I +A + VTID +
Sbjct: 136 --EQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAGSQGVTIDHQ 193
Query: 243 PDRGGMAGG-CC 253
G GG CC
Sbjct: 194 GSGAGNLGGKCC 205
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/257 (42%), Positives = 152/257 (59%), Gaps = 56/257 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+K YD+LFKLLLIGDSGVGKTC+LFRF++++FN TFISTIGIDFKI+TV++ GK+IKLQ
Sbjct: 15 AQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFKIQTVEIDGKRIKLQ 74
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+LVYD+T++K+F+NI WL+NI+EHA E VE++++
Sbjct: 75 VWDTAGQERFRTITTAYYRGAMGILLVYDVTSKKTFENITNWLKNIEEHAAEGVEQLLVA 134
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ED +V++
Sbjct: 135 NKCD-----------------------------------------------QEDKRVIS- 146
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD-----R 236
+ +G+ +A +G+ F+E SA N+ +AF +A + K ++ + D +
Sbjct: 147 ---EEQGQLLAVHHGIDFIECSAMTGENVREAFYRMARRVKTKHESKESAQRADGSKSVK 203
Query: 237 VTIDKKPDRGGMAGGCC 253
+ D G G CC
Sbjct: 204 ILSDPGSPLGKSLGNCC 220
>gi|342885719|gb|EGU85701.1| hypothetical protein FOXB_03847 [Fusarium oxysporum Fo5176]
Length = 203
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 149/252 (59%), Gaps = 51/252 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W +N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A E G+ F+E SAK+NINI+KAF LA I + + P ++
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNDQPSASGVNV 191
Query: 242 KPDRGGMAGGCC 253
G CC
Sbjct: 192 GDKSEGGGSKCC 203
>gi|67541621|ref|XP_664578.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|40742430|gb|EAA61620.1| hypothetical protein AN6974.2 [Aspergillus nidulans FGSC A4]
gi|259483720|tpe|CBF79342.1| TPA: Rab GTPase SrgA (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 206
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 148/253 (58%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V +
Sbjct: 125 CD--------------------------------------W---------EEKRAVTT-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKK 242
+G+ +A E G+ F+E SAK NINIEKAF LA+ I P + + V+ID +
Sbjct: 136 --EQGQQLADELGIPFLEVSAKNNINIEKAFYNLASDIKKGMDSSKPEQTGSQGVSIDNQ 193
Query: 243 PD--RGGMAGGCC 253
G G CC
Sbjct: 194 ASGLSGNAGGKCC 206
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/239 (46%), Positives = 146/239 (61%), Gaps = 52/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVP--------P 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
+G+A A EYG++F ETSAK N+N+E+ F +A I + S D P+ TI K +
Sbjct: 142 SKGQAFADEYGIKFFETSAKTNLNVEQVFFFIARDIKQRLSETDS--KPEGRTIKIKSE 198
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 151/252 (59%), Gaps = 55/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W +N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFQNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ +VV++
Sbjct: 125 CD--------------------------------------W---------EEKRVVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDK 241
+G+A+A E G+ F+E SAK+NINI+KAF LA I + + P V +
Sbjct: 136 --EQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNDQPSASGVNVGD 193
Query: 242 KPDRGGMAGGCC 253
K + GG CC
Sbjct: 194 KSEAGGSK--CC 203
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 142/225 (63%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L YDIT+EKSF+NI W+++I E+A+ VE ++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGR 176
>gi|325092195|gb|EGC45505.1| GTP-binding protein [Ajellomyces capsulatus H88]
Length = 205
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 150/252 (59%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V +
Sbjct: 125 CD--------------------------------------W---------EEKRAVTT-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKK 242
+G+ +A E G+ F+E SAK NIN+EKAF LA+ I +A + VTID +
Sbjct: 136 --EQGQKLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAGSQGVTIDHQ 193
Query: 243 PDR-GGMAGGCC 253
G + G CC
Sbjct: 194 GSGVGNLGGKCC 205
>gi|321254029|ref|XP_003192938.1| rab/GTPase [Cryptococcus gattii WM276]
gi|317459407|gb|ADV21151.1| Rab/GTPase, putative [Cryptococcus gattii WM276]
Length = 211
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 151/261 (57%), Gaps = 63/261 (24%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A + YDFL KLLLIGDSGVGK+C+L RF +D++ +FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 5 AGQHYDFLIKLLLIGDSGVGKSCLLLRFCEDSWTPSFITTIGIDFKIRTIELDGKRIKLQ 64
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI WL NI++HA+ V K+++G
Sbjct: 65 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIEQHASPGVNKILIG 124
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D E ++T R
Sbjct: 125 NKCD---WEEKRSVTIEQGR---------------------------------------- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
A+A E+G+RF+ETSAKAN +E+AF LA I + P EA +
Sbjct: 142 --------ALADEFGLRFLETSAKANEGVEEAFFTLARDIKTRLIDSQPQEA---APVQL 190
Query: 242 KPDRGGM---------AGGCC 253
DRGG+ +GGCC
Sbjct: 191 GADRGGVNVNKQSDSSSGGCC 211
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 152/254 (59%), Gaps = 55/254 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 5 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 64
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W +N+++HA E V K+++G
Sbjct: 65 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANIRTWFQNVEQHATEGVNKILIG 124
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W ED +VV++
Sbjct: 125 NKCD--------------------------------------W---------EDKRVVST 137
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA--PDRVTI 239
+G+A+A E G+ F+E SAK+NINI++AF LA I + +A V +
Sbjct: 138 ----EQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQKTDAGVSSGVKV 193
Query: 240 DKKPDRGGMAGGCC 253
++ D GG CC
Sbjct: 194 GEQSDNGGSK--CC 205
>gi|451847505|gb|EMD60812.1| hypothetical protein COCSADRAFT_97517 [Cochliobolus sativus ND90Pr]
Length = 206
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 148/255 (58%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 GSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ + V++
Sbjct: 123 NKCD--------------------------------------W---------EEKRAVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVT 238
+G+A+A E G+ F+E SAK+NIN++KAF LA I + T+ D P
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDIKKRLIDTARTDQTATPKVDV 191
Query: 239 IDKKPDRGGMAGGCC 253
+ GM G CC
Sbjct: 192 SGQDGGNAGMGGKCC 206
>gi|145248582|ref|XP_001400630.1| GTP-binding protein ypt2 [Aspergillus niger CBS 513.88]
gi|11558647|emb|CAC17832.1| secretion related GTPase, (SrgA) [Aspergillus niger]
gi|134081297|emb|CAK41800.1| secretion related GTPase srgA-Aspergillus niger
gi|350639164|gb|EHA27518.1| hypothetical protein ASPNIDRAFT_210814 [Aspergillus niger ATCC
1015]
Length = 206
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 150/253 (59%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKK 242
+G+ +A E G+ F+E SAK NINIEKAF +LA+ I + + V+ID++
Sbjct: 136 --EQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSKSEQVGSQGVSIDQQ 193
Query: 243 PD--RGGMAGGCC 253
G G CC
Sbjct: 194 GSGLNGSAGGKCC 206
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 147/241 (60%), Gaps = 54/241 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ + V+
Sbjct: 123 NKCD--------------------------------------W---------EEKRAVS- 134
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVT 238
K +G+A+A E G+ F+E SAKANINIE+AF LA I + TSG++ V
Sbjct: 135 ---KEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTSGKEASGGSSGVN 191
Query: 239 I 239
+
Sbjct: 192 V 192
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 148/252 (58%), Gaps = 51/252 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W +N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFQNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W ED +VV++
Sbjct: 123 NKCD--------------------------------------W---------EDKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A E G+ F+E SAK+NINI++AF LA I + + ++
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQKTDVGTSSGVNV 191
Query: 242 KPDRGGMAGGCC 253
+G CC
Sbjct: 192 GEKSEAASGKCC 203
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 146/250 (58%), Gaps = 51/250 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W ED +VV++
Sbjct: 125 CD--------------------------------------W---------EDKRVVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
RG+ +A E G+ F+E SAK+NIN+EKAF LA I + ++ + +D
Sbjct: 136 --ERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADIKKRIVDTSKIDQAAQQGVDVGG 193
Query: 244 DRGGMAGGCC 253
G CC
Sbjct: 194 QSSGGGSKCC 203
>gi|58265066|ref|XP_569689.1| Rab/GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134109357|ref|XP_776793.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259473|gb|EAL22146.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225921|gb|AAW42382.1| Rab/GTPase, putative [Cryptococcus neoformans var. neoformans
JEC21]
gi|304569874|gb|ADM45310.1| Sav1 [Cryptococcus neoformans]
gi|405119103|gb|AFR93876.1| rab/GTPase [Cryptococcus neoformans var. grubii H99]
Length = 211
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/260 (45%), Positives = 153/260 (58%), Gaps = 61/260 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A + YDFL KLLLIGDSGVGK+C+L RF +D++ +FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 5 AGQHYDFLIKLLLIGDSGVGKSCLLLRFCEDSWTPSFITTIGIDFKIRTIELDGKRIKLQ 64
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI WL NI++HA+ V K+++G
Sbjct: 65 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIEQHASPGVNKILIG 124
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D E ++T R
Sbjct: 125 NKCD---WEEKRSVTIEQGR---------------------------------------- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA------PD 235
A+A E+G+RF+ETSAKAN +E+AF LA I + P EA D
Sbjct: 142 --------ALADEFGLRFLETSAKANEGVEEAFFTLARDIKTRLIDSQPQEAAPVQLGAD 193
Query: 236 R--VTIDKKPDRGGMAGGCC 253
R V ++K+ D +GGCC
Sbjct: 194 RNGVNVNKQSDSS--SGGCC 211
>gi|451996574|gb|EMD89040.1| hypothetical protein COCHEDRAFT_1140780 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 148/255 (58%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 GSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ + V++
Sbjct: 123 NKCD--------------------------------------W---------EEKRAVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVT 238
+G+A+A E G+ F+E SAK+NIN++KAF LA I + T+ D P
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDIKKRLIDTARTDQSATPKVDV 191
Query: 239 IDKKPDRGGMAGGCC 253
+ GM G CC
Sbjct: 192 SGQDGGNAGMGGKCC 206
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 148/230 (64%), Gaps = 53/230 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YDFLFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFK+KT++++GKK+KL
Sbjct: 1 MAKK-YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKL 59
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
Q+WDTAGQERF TITT+YYRGAMGI+LVYDIT+EKS++NI W+++I E+A+ V +M+L
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSRMLL 119
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + + V T EK
Sbjct: 120 GNKCDIEAKRK-----------------VSKETGEK------------------------ 138
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP 230
+A+E+G+RF ETSAK++IN+E++F LA I K S + P
Sbjct: 139 ----------LAKEHGIRFFETSAKSSINVEESFTSLARDILLK-SNKKP 177
>gi|328855882|gb|EGG05006.1| hypothetical protein MELLADRAFT_37102 [Melampsora larici-populina
98AG31]
Length = 209
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/254 (45%), Positives = 148/254 (58%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 7 YDFLIKLLLIGDSGVGKSCLLLRFCDDAYTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T++KSF NI W NID+HA+E V K++LG D
Sbjct: 67 AGQERFRTITTAYYRGAMGILLVYDVTDDKSFTNIRTWHSNIDQHASEGVNKILLGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +V++ +
Sbjct: 127 ST-----------------------------------------------DKKVIS----E 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVTIDKK 242
+G +A E G+ FMETSAK N N+E+AF LA I + T+G D +
Sbjct: 136 EQGRELATELGISFMETSAKTNTNVEEAFFSLARDIKTRLIDTAGPDQSSGSNPNGSSIT 195
Query: 243 PDRGGMAG---GCC 253
++ G AG GCC
Sbjct: 196 VNQSGTAGGKTGCC 209
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 150/253 (59%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKK 242
+G+ +A E G+ F+E SAK NINIEKAF +LA+ I + + V+ID++
Sbjct: 136 --EQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSKSEQVGSQGVSIDQQ 193
Query: 243 PD--RGGMAGGCC 253
G G CC
Sbjct: 194 GSGLNGNAGGKCC 206
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 148/252 (58%), Gaps = 51/252 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W +N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFSNIRTWFQNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W ED +VV++
Sbjct: 123 NKCD--------------------------------------W---------EDKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A E G+ F+E SAK+NINI++AF LA I + + ++
Sbjct: 136 ----EQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQKTDTGTSSGVNV 191
Query: 242 KPDRGGMAGGCC 253
+G CC
Sbjct: 192 GEKNDAASGKCC 203
>gi|393248191|gb|EJD55698.1| GTP-binding protein, SEC4 [Auricularia delicata TFB-10046 SS5]
Length = 209
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/259 (44%), Positives = 151/259 (58%), Gaps = 57/259 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M + YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPQHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W + +VV+
Sbjct: 121 GNKSD--------------------------------------W---------TEKKVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP------LEAP 234
+ +G A+A+E G+RF+ETSAK N +E+AF LA I + P A
Sbjct: 134 ----EDQGRALAQELGIRFLETSAKVNEGVEEAFFTLARDIKTRLIDSQPENANAGAGAA 189
Query: 235 DRVTIDKKPDRGGMAGGCC 253
+I+ K AGGCC
Sbjct: 190 GDASINPKQPAAQGAGGCC 208
>gi|426233180|ref|XP_004010595.1| PREDICTED: ras-related protein Rab-8B [Ovis aries]
Length = 207
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/221 (51%), Positives = 137/221 (61%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+L + + F+ GIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLELYLKTLSMSFFLFLAGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK+++N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIMTK 172
>gi|303276166|ref|XP_003057377.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461729|gb|EEH59022.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 141/221 (63%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD L KLLLIGDSGVGK+C+L RFSDD+F T+FI+TIGIDFKI+TV+L GK++KLQIW
Sbjct: 6 QQYDHLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVELDGKRVKLQIW 65
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L YD+T+E SF+N+ W+RNI++HA+E+V K+++G
Sbjct: 66 DTAGQERFRTITTAYYRGAMGILLTYDVTDETSFNNVRNWMRNIEQHASENVNKILVGNK 125
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D ED +V++
Sbjct: 126 CDM-----------------------------------------------EDKRVIS--- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
RG+A+A E+G+ F ETSAKAN+ +E AF +A I ++
Sbjct: 136 -HARGKALADEFGIPFFETSAKANVKVEDAFFSIARDIKNR 175
>gi|90079487|dbj|BAE89423.1| unnamed protein product [Macaca fascicularis]
Length = 165
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/112 (83%), Positives = 107/112 (95%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDV 115
DTAGQERF T+TT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D+
Sbjct: 63 DTAGQERFRTVTTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADI 114
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/63 (71%), Positives = 52/63 (82%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF T+TT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D V N++
Sbjct: 63 DTAGQERFRTVTTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADINVENAFFT 122
Query: 185 KHR 187
R
Sbjct: 123 LAR 125
>gi|403159464|ref|XP_003320075.2| Ras-like protein Rab-8A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168105|gb|EFP75656.2| Ras-like protein Rab-8A [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 212
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/220 (48%), Positives = 135/220 (61%), Gaps = 51/220 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 3 ANPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAYTPSFITTIGIDFKIRTIELDGKRIKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI W NID+HA+E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFENIRNWHSNIDQHASEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D+ V
Sbjct: 123 NKSDS---------------------------------------------------VEKK 131
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+ +++G +A E G+ FMETSAKAN N+E+AF LA I
Sbjct: 132 IIQENQGRELAAELGISFMETSAKANTNVEEAFFSLARDI 171
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 150/255 (58%), Gaps = 59/255 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+ NI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIHNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+G+A+A EYG++F ETSAK N+N+ + F +A I + + D + P + I+ P
Sbjct: 142 SKGQALADEYGIKFFETSAKTNLNVGEVFFSIARDIKQRLADTDSSKTEPTGIKIN--PQ 199
Query: 245 RGGMAG------GCC 253
G AG CC
Sbjct: 200 DKGSAGEAAQKSACC 214
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 140/221 (63%), Gaps = 51/221 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ K+YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+L+YD+T++KSFDN+ W N+++HA+E+V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D Q +
Sbjct: 121 GNKCDCEDQRQ------------------------------------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
V +G+A+A E GV+F+E SAK N+N+++AF LA I
Sbjct: 132 --VSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 137/218 (62%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIRTWFSNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W ED +VV++
Sbjct: 125 CD--------------------------------------W---------EDKRVVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
RG+ +A E G+ F+E SAK+NIN+EKAF LA I
Sbjct: 136 --ERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADI 171
>gi|212535970|ref|XP_002148141.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
gi|210070540|gb|EEA24630.1| Rab GTPase SrgA, putative [Talaromyces marneffei ATCC 18224]
Length = 206
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 150/253 (59%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKK 242
+G+ +A E G+ F+E SAK NIN++KAF LA+ I +A + V ID+
Sbjct: 136 --EQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDSTKSEQAGGQGVNIDQN 193
Query: 243 --PDRGGMAGGCC 253
G + G CC
Sbjct: 194 NAGSNGNLGGKCC 206
>gi|198422153|ref|XP_002119751.1| PREDICTED: similar to RAB8B, member RAS oncogene family [Ciona
intestinalis]
Length = 177
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 108/114 (94%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+D FN+TFISTIGIDFKI+T+DL GKK+KLQIW
Sbjct: 7 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDHFNSTFISTIGIDFKIRTIDLDGKKVKLQIW 66
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEK 117
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSF+NI W+RNI+EHA+ DV++
Sbjct: 67 DTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHASSDVKR 120
Score = 96.7 bits (239), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 70/120 (58%), Gaps = 25/120 (20%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TITT+YYRGAMGIMLVYDITN+KSF+NI W+RNI+EHA+ D
Sbjct: 67 DTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKNWIRNIEEHASSD--------- 117
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKP 243
++ AK ++N+E+AF LA I K + + P+ TI K
Sbjct: 118 ---------------VKRCAKQSLNVEEAFFTLARDIKAKMDNKMADSSHPNMTTIHVKS 162
>gi|367022590|ref|XP_003660580.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
gi|347007847|gb|AEO55335.1| hypothetical protein MYCTH_2314205 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/256 (44%), Positives = 150/256 (58%), Gaps = 57/256 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 123 NKCD--------------------------------------W---------EEKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVT 238
RG+ +A E G+ F+E SAK N NI+KAF LA I + TS D A V
Sbjct: 136 ----ERGQQLADELGIPFLEVSAKTNTNIDKAFYSLAADIKKRIIDTSKPDQAAAGQAVN 191
Query: 239 I-DKKPDRGGMAGGCC 253
+ DK G+ CC
Sbjct: 192 VGDKSGSESGVK--CC 205
>gi|452988932|gb|EME88687.1| hypothetical protein MYCFIDRAFT_58012 [Pseudocercospora fijiensis
CIRAD86]
Length = 206
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 139/218 (63%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+A+A E G+ FME SAK+NIN++KAF LAT I
Sbjct: 136 --EQGQALADELGIPFMEVSAKSNINVDKAFYSLATDI 171
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 108/233 (46%), Positives = 147/233 (63%), Gaps = 52/233 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD LFKLLLIGDSGVGKTC++ RFS+D+F+ T+ISTIGIDFKI+TV+++GK+IKLQ+W
Sbjct: 3 KSYDHLFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG-- 120
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
N+ V V
Sbjct: 121 -------------------------------------------------NKCDMEVKRKV 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR 236
+ + E + RE+G+RF ETSAK+++N+E+AF LA I + S + + P R
Sbjct: 132 SRDQAEKLCREHGIRFFETSAKSSLNVEEAFNTLARDILLR-SIKKSAQLPKR 183
>gi|296819571|ref|XP_002849869.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
gi|238840322|gb|EEQ29984.1| GTP-binding protein SAS1 [Arthroderma otae CBS 113480]
Length = 205
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/252 (44%), Positives = 145/252 (57%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYR AMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D G+E+ V
Sbjct: 125 CD--GEEK-------------------------------------------------RAV 133
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI-YDKTSGRDPLEAPDRVTIDKK 242
+G+ +A E G+ F+E SAK NIN++KAF LAT I D + V ID +
Sbjct: 134 TVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSKAEQAGSQGVNIDNQ 193
Query: 243 PDRGGMAG-GCC 253
GG G CC
Sbjct: 194 NGTGGSLGKSCC 205
>gi|452839356|gb|EME41295.1| hypothetical protein DOTSEDRAFT_73639 [Dothistroma septosporum
NZE10]
Length = 207
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 138/218 (63%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFSNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+A+A E G+ FME SAK+NIN+EKAF LA I
Sbjct: 136 --EQGQALADELGIPFMEVSAKSNINVEKAFYSLAGDI 171
>gi|398407001|ref|XP_003854966.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
gi|339474850|gb|EGP89942.1| hypothetical protein MYCGRDRAFT_99145 [Zymoseptoria tritici IPO323]
Length = 207
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 138/220 (62%), Gaps = 51/220 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 GSRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ + V++
Sbjct: 123 NKCD--------------------------------------W---------EEKRAVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+A+A E G+ FME SAK+NIN+EKAF LA I
Sbjct: 136 ----EQGQALADELGIPFMEVSAKSNINVEKAFFSLAGDI 171
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 147/238 (61%), Gaps = 56/238 (23%)
Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQE 69
FKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+WDTAGQE
Sbjct: 1 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 60
Query: 70 RFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQ 129
RF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG D +
Sbjct: 61 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAK 120
Query: 130 ERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGE 189
+ V K + +
Sbjct: 121 RK---------------------------------------------------VQKEQAD 129
Query: 190 AIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVTIDKK 242
+ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T DKK
Sbjct: 130 KLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKTCDKK 187
>gi|402079275|gb|EJT74540.1| GTP-binding protein ypt2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 203
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 148/251 (58%), Gaps = 53/251 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD L KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDVLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHASEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKK 242
+G+A+A E G+ F+E SAK NINI+KAF LA+ I +T + P V +
Sbjct: 136 --EQGQALADELGIPFLEVSAKGNINIDKAFYSLASDIKKRTIDTAKEYQNPSSVNVGAN 193
Query: 243 PDRGGMAGGCC 253
+ G CC
Sbjct: 194 TE-ASRTGNCC 203
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 143/253 (56%), Gaps = 51/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK+YD LFK+LLIGDSGVGKTC+L R+ +++F TFISTIGIDFKIKT++L+GKKIKL
Sbjct: 1 MAKKSYDALFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIELEGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTIT+SYYRGAMGIML+YDIT+ ++FDN+ W+ A+ +VEK+++
Sbjct: 61 QIWDTAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTWMNRTFSLASNEVEKLLI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
D A H SY
Sbjct: 121 ANKCDMA-----HNRVVSY----------------------------------------- 134
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
G A EYG+ F+ETSAK++ N+ KAF EL AI +S R +
Sbjct: 135 -----EEGRQKAEEYGIGFLETSAKSSTNVHKAFEELTRAILHNSSIRRHESSTVTQVHR 189
Query: 241 KKPDRGGMAGGCC 253
++G CC
Sbjct: 190 LAEPPNSISGTCC 202
>gi|242794469|ref|XP_002482380.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
gi|218718968|gb|EED18388.1| Rab GTPase SrgA, putative [Talaromyces stipitatus ATCC 10500]
Length = 206
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 149/253 (58%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V +
Sbjct: 125 CD--------------------------------------W---------EEKRAVTT-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDK- 241
+G+ +A E G+ F+E SAK NIN++KAF LA+ I +A + V ID+
Sbjct: 136 --EQGQKLADELGIPFLEVSAKNNINVDKAFYSLASEIKKVMDSTKSEQAGTQGVNIDQH 193
Query: 242 -KPDRGGMAGGCC 253
G + G CC
Sbjct: 194 NAGSNGNLGGKCC 206
>gi|346976474|gb|EGY19926.1| GTP-binding protein SAS1 [Verticillium dahliae VdLs.17]
Length = 208
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 112/257 (43%), Positives = 147/257 (57%), Gaps = 56/257 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W ED +VV++
Sbjct: 123 NKCD--------------------------------------W---------EDKRVVST 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+ +A E G+ F+E SAK+NINI+KAF LA I + EA
Sbjct: 136 ----EQGQQLADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNQKSEAGAGGASGG 191
Query: 242 K-----PDRGGMAGGCC 253
GG G CC
Sbjct: 192 AGGVPIAQAGGSGGKCC 208
>gi|393911208|gb|EJD76212.1| hypothetical protein LOAG_16781 [Loa loa]
Length = 292
Score = 202 bits (515), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 103/175 (58%), Positives = 127/175 (72%), Gaps = 5/175 (2%)
Query: 12 LLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERF 71
LLLIGDSGVGKTCVLFRFSDD+FN +FISTIGIDFKI+T++L GKKIKLQIWDTAGQERF
Sbjct: 94 LLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERF 153
Query: 72 HTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT----- 126
TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DV++MI+G D
Sbjct: 154 RTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNKCDVEERRQ 213
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
+ER + Y M +I E++F + + ++ E A++ N+
Sbjct: 214 VSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQQTTTQNT 268
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 90/134 (67%), Gaps = 13/134 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ D +
Sbjct: 146 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVDRMIIGNK 205
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT---SGRDPL 231
V + RGE +A EYG +FMETSAKANIN+E+AF LA I KT S +
Sbjct: 206 CDVEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQQTTT 265
Query: 232 EAPDRVTIDKKPDR 245
+ R+T+ + P +
Sbjct: 266 QNTGRITVHQMPRK 279
>gi|388517121|gb|AFK46622.1| unknown [Medicago truncatula]
Length = 182
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 135/209 (64%), Gaps = 50/209 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T FISTIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTGFISTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ER + TS
Sbjct: 132 MDESER--AVPTS----------------------------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAF 214
+G+A+A EYG++F ETSAK N+N+E+ F
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEEVF 170
>gi|70982277|ref|XP_746667.1| Rab GTPase SrgA [Aspergillus fumigatus Af293]
gi|119486547|ref|XP_001262318.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|66844290|gb|EAL84629.1| Rab GTPase SrgA, putative [Aspergillus fumigatus Af293]
gi|119410475|gb|EAW20421.1| Rab GTPase SrgA, putative [Neosartorya fischeri NRRL 181]
gi|159122097|gb|EDP47219.1| Rab GTPase SrgA, putative [Aspergillus fumigatus A1163]
Length = 206
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 138/218 (63%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+ +A E G+ F+E SAK NINIEKAF LA+AI
Sbjct: 136 --EQGQQLADELGIPFLEVSAKNNINIEKAFYSLASAI 171
>gi|449296903|gb|EMC92922.1| hypothetical protein BAUCODRAFT_151311 [Baudoinia compniacensis
UAMH 10762]
Length = 208
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 139/221 (62%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWFSNVEQHASEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+G+ +A E + FME SAK+NIN+EKAF LA+ I K
Sbjct: 136 --EQGQQLANELNIPFMEVSAKSNINVEKAFFSLASDIKKK 174
>gi|402218850|gb|EJT98925.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 208
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 138/221 (62%), Gaps = 51/221 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MVNPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT +YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITVAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W +D + V+
Sbjct: 121 GNKCD--------------------------------------W---------DDKRAVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+ +G+ +A E GVRF+ETSAK NIN+E+AF LA I
Sbjct: 134 T----QQGQELADELGVRFLETSAKQNINVEEAFFSLARDI 170
>gi|453083457|gb|EMF11503.1| GTP-binding protein SAS1 [Mycosphaerella populorum SO2202]
Length = 206
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 150/253 (59%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID--- 240
+G+A+A E G+ FME SAK+NIN++KAF LA I + + ++ +
Sbjct: 136 --EQGQALADELGIPFMEVSAKSNINVDKAFYSLAGDIKKRIVDTQQPQQGNQQGVSVGG 193
Query: 241 KKPDRGGMAGGCC 253
++ GG+ CC
Sbjct: 194 QQSAAGGLGKNCC 206
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 138/218 (63%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+ +A E G+ F+E SAK NIN+EKAF LA+ I
Sbjct: 136 --EQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDI 171
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 138/218 (63%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+ +A E G+ F+E SAK NIN+EKAF LA+ I
Sbjct: 136 --EQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDI 171
>gi|170100328|ref|XP_001881382.1| GTP-binding protein, SEC4 [Laccaria bicolor S238N-H82]
gi|164644061|gb|EDR08312.1| GTP-binding protein, SEC4 [Laccaria bicolor S238N-H82]
Length = 205
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/257 (44%), Positives = 148/257 (57%), Gaps = 57/257 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHNNIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA----TAIYDKTSGRDPLEAPDR 236
V + +G +A E G+RFMETSAK N +E+AF LA T + D + A D
Sbjct: 132 --VTEEQGRELANELGIRFMETSAKVNEGVEEAFFTLARDIKTRLIDSQADAAAPAATDS 189
Query: 237 VTIDKKPDRGGMAGGCC 253
V +++ + GCC
Sbjct: 190 VRVNQPAAQSSQ--GCC 204
>gi|392579564|gb|EIW72691.1| hypothetical protein TREMEDRAFT_58860 [Tremella mesenterica DSM
1558]
Length = 208
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/243 (46%), Positives = 145/243 (59%), Gaps = 52/243 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GKKIKL
Sbjct: 1 MGGAHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W NID+HA+ V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFSNIRTWHANIDQHASPGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W +D + V+
Sbjct: 121 GNKCD--------------------------------------W---------DDKRAVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP-LEAPDRVTI 239
+G+A+A E+G+RF+ETSAKAN +E+AF LA I + P AP +
Sbjct: 134 L----EQGKALADEFGLRFLETSAKANEGVEEAFFTLARDIKTRLIDSQPEAAAPVSLAA 189
Query: 240 DKK 242
D+K
Sbjct: 190 DRK 192
>gi|147788168|emb|CAN64837.1| hypothetical protein VITISV_030375 [Vitis vinifera]
Length = 237
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 150/275 (54%), Gaps = 78/275 (28%)
Query: 6 YDFLFKLLLIGDSGV---------------------GKTCVLFRFSDDAFNTTFISTIGI 44
YD+L KLLLIGDSG+ GK+C+L RFSDD+F T+FI+TIGI
Sbjct: 12 YDYLVKLLLIGDSGLNLIAFGSYLICTKANYLILGLGKSCLLLRFSDDSFTTSFITTIGI 71
Query: 45 DFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWL 104
DFKI+T++L GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+
Sbjct: 72 DFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWI 131
Query: 105 RNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKW 164
RNI++HA+++V K+++G D
Sbjct: 132 RNIEQHASDNVNKILVGNKAD--------------------------------------- 152
Query: 165 LRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+DE P +G+A+A EYG++F ETSAK N N+E+ F +A I +
Sbjct: 153 ---MDESKRAVPT--------SQGQALADEYGIKFFETSAKTNFNVEQVFFSIARDIKQR 201
Query: 225 TSGRDPLEAPDRVTIDKKPDRGGMAG------GCC 253
+ D P + I KPD + CC
Sbjct: 202 IAESDSKAEPLTIKI-SKPDPAXXSATAQEKSACC 235
>gi|449550450|gb|EMD41414.1| rab-type small GTP-binding protein [Ceriporiopsis subvermispora B]
Length = 209
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 146/260 (56%), Gaps = 58/260 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-------TSGRDPLEA 233
V +G+ +A E G++FMETSAK N +E+AF LA I + +G P +
Sbjct: 132 --VTTEQGQELANELGIKFMETSAKINEGVEEAFFTLARDIKTRLIDSQADAAGATPGTS 189
Query: 234 PDRVTIDKKPDRGGMAGGCC 253
+ AGGCC
Sbjct: 190 GSDGAVKVNQPATQTAGGCC 209
>gi|389750829|gb|EIM91902.1| rab-type small GTP-binding protein [Stereum hirsutum FP-91666 SS1]
Length = 210
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/251 (44%), Positives = 144/251 (57%), Gaps = 64/251 (25%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D T++K+
Sbjct: 121 GNKS--------------------------DWTDKKA----------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V + +G +A E G+RFMETSAK N +E+AF LA I + ID
Sbjct: 132 --VTEEQGRELAEELGIRFMETSAKINEGVEEAFFTLARDIKAR-------------LID 176
Query: 241 KKPDRGGMAGG 251
+ D G GG
Sbjct: 177 SQADAAGAPGG 187
>gi|392572121|gb|EIW65293.1| rab-type small GTP-binding protein [Trametes versicolor FP-101664
SS1]
Length = 208
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 150/261 (57%), Gaps = 61/261 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + + +T E+
Sbjct: 121 GNKSDWSEKRA--------------------VTEEQ------------------------ 136
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-------TSGRDPLE- 232
G +A E G++FMETSAK N +E+AF LA I + +G P +
Sbjct: 137 -------GRELANELGIKFMETSAKINEGVEEAFFTLARDIKTRLIDSQADNAGAAPGQP 189
Query: 233 APDRVTIDKKPDRGGMAGGCC 253
D V +++ + AGGCC
Sbjct: 190 GADSVKVNQPASQA--AGGCC 208
>gi|47225370|emb|CAG11853.1| unnamed protein product [Tetraodon nigroviridis]
Length = 160
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/212 (48%), Positives = 138/212 (65%), Gaps = 52/212 (24%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YDFLFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFK+KT+D+ GKK+KL
Sbjct: 1 MAKK-YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKL 59
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
Q+WDTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ V +M+L
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLL 119
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + +
Sbjct: 120 GNKCDIEAKRK------------------------------------------------- 130
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEK 212
V + GE +A+++G++F ETSAK++IN+E+
Sbjct: 131 --VSRETGEKLAKDHGIKFFETSAKSSINVEE 160
>gi|302848074|ref|XP_002955570.1| RabE/Rab8 [Volvox carteri f. nagariensis]
gi|549809|sp|P36861.1|YPTV2_VOLCA RecName: Full=GTP-binding protein yptV2
gi|409162|gb|AAA34251.1| GTP-binding protein [Volvox carteri]
gi|300259193|gb|EFJ43423.1| RabE/Rab8 [Volvox carteri f. nagariensis]
Length = 217
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 139/225 (61%), Gaps = 50/225 (22%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
+ YD L KLLL+GDSGVGK+C+L RF+DD F ++FI+TIGIDFKIK VD+ GK +KLQI
Sbjct: 7 RPDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQI 66
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT++YYRGA GI+LVYDIT+E SF+N+ W+RNI++HA+++V K+++G
Sbjct: 67 WDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGN 126
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D A +R +I
Sbjct: 127 KLDLAEDKRVVSIA---------------------------------------------- 140
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
RG+A+A E+G RF ETSAK N+++E+AFI +A + + G
Sbjct: 141 ----RGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEG 181
>gi|409082989|gb|EKM83346.1| hypothetical protein AGABI1DRAFT_110016 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201961|gb|EKV51884.1| rab-type small GTP-binding protein [Agaricus bisporus var. bisporus
H97]
Length = 209
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 135/221 (61%), Gaps = 51/221 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHSNIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
V + +G +A E G+RFMETSAK N +E+AF LA I
Sbjct: 132 --VTEEQGRQLAEELGLRFMETSAKVNEGVEEAFFTLARDI 170
>gi|366997238|ref|XP_003678381.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
gi|342304253|emb|CCC72042.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
Length = 218
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 144/255 (56%), Gaps = 58/255 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A K YD + K+LLIGDSGVGK+C+L RF ++ FN +FI+TIGIDFKIKT+D++G+KIKLQ
Sbjct: 19 AAKNYDSVMKILLIGDSGVGKSCLLVRFVENKFNPSFITTIGIDFKIKTLDIQGRKIKLQ 78
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W ++EHANE V+ +++G
Sbjct: 79 LWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFQNIRQWYSTVNEHANEQVQLLLVG 138
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ++
Sbjct: 139 NKSDLGNRQ--------------------------------------------------- 147
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR---DPLEAPDRVT 238
V K +GE +ARE G+ FME SAK + N+ F++LA I +K +P A V
Sbjct: 148 -VTKEQGEELARELGLPFMEASAKNDDNVNDLFLQLAKLIQEKIDNDEMGEPRTAKKNVN 206
Query: 239 IDKKPDRGGMAGGCC 253
I K G CC
Sbjct: 207 IKSKD---GKTSSCC 218
>gi|255935933|ref|XP_002558993.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583613|emb|CAP91628.1| Pc13g05590 [Penicillium chrysogenum Wisconsin 54-1255]
gi|425777724|gb|EKV15880.1| Rab GTPase SrgA, putative [Penicillium digitatum PHI26]
gi|425782706|gb|EKV20602.1| Rab GTPase SrgA, putative [Penicillium digitatum Pd1]
Length = 206
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 137/218 (62%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+ +A E G+ F+E SAK NINIEKAF LA+ I
Sbjct: 136 --EQGQQLADELGIPFLEVSAKNNINIEKAFYSLASDI 171
>gi|357472677|ref|XP_003606623.1| Small GTP-binding protein [Medicago truncatula]
gi|355507678|gb|AES88820.1| Small GTP-binding protein [Medicago truncatula]
Length = 216
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 148/254 (58%), Gaps = 56/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITT--SYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
AGQERF + +YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 72 AGQERFSFVINNFTYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNKILVGNK 131
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +DE P
Sbjct: 132 AD------------------------------------------MDESKRAVP------- 142
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++
Sbjct: 143 -TSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDNKAEPTTIKINQDS 201
Query: 244 DRG-GMAG---GCC 253
G G A CC
Sbjct: 202 ATGSGQAAQKSACC 215
>gi|15242773|ref|NP_195972.1| RAB GTPase-8C [Arabidopsis thaliana]
gi|75181251|sp|Q9LZD4.1|RAE1D_ARATH RecName: Full=Ras-related protein RABE1d; Short=AtRABE1d; AltName:
Full=Ras-related protein Rab8C; Short=AtRab8C
gi|7378637|emb|CAB83313.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|14334902|gb|AAK59629.1| unknown protein [Arabidopsis thaliana]
gi|15810625|gb|AAL07200.1| unknown protein [Arabidopsis thaliana]
gi|332003234|gb|AED90617.1| RAB GTPase-8C [Arabidopsis thaliana]
Length = 216
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 151/256 (58%), Gaps = 54/256 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKI+TV+L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPTA--- 142
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E F+ +A I + + D P + I K
Sbjct: 143 -----KGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKAEPQGIKITK 197
Query: 242 KPDRGGMA----GGCC 253
+ + CC
Sbjct: 198 QDTAASSSTAEKSACC 213
>gi|115388891|ref|XP_001211951.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
gi|114196035|gb|EAU37735.1| GTP-binding protein SAS1 [Aspergillus terreus NIH2624]
Length = 206
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 137/218 (62%), Gaps = 51/218 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D W E+ + V++
Sbjct: 125 CD--------------------------------------W---------EEKRAVST-- 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+ +A E G+ F+E SAK NINIEKAF LA+ I
Sbjct: 136 --EQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEI 171
>gi|169843608|ref|XP_001828531.1| rab-type small GTP-binding protein [Coprinopsis cinerea
okayama7#130]
gi|116510391|gb|EAU93286.1| rab-type small GTP-binding protein [Coprinopsis cinerea
okayama7#130]
Length = 208
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 112/251 (44%), Positives = 143/251 (56%), Gaps = 64/251 (25%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V + +G +A E G++FMETSAK N +E+AF LA I + ID
Sbjct: 132 --VTEEQGRELANELGIKFMETSAKVNEGVEEAFFTLARDIKTR-------------LID 176
Query: 241 KKPDRGGMAGG 251
+ D G GG
Sbjct: 177 SQADAAGTPGG 187
>gi|297829522|ref|XP_002882643.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
gi|297328483|gb|EFH58902.1| hypothetical protein ARALYDRAFT_478314 [Arabidopsis lyrata subsp.
lyrata]
Length = 218
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 111/241 (46%), Positives = 147/241 (60%), Gaps = 50/241 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKI+TV+L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI++HA++ V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPT---- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N N+E+ F+ +A I + + D P + I K
Sbjct: 142 ----SKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQGIKITK 197
Query: 242 K 242
K
Sbjct: 198 K 198
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 143/239 (59%), Gaps = 53/239 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+++ YD KLLL+GDSGVGK+C+L RF DD+FN +FI+TIGIDFKI+TV++ GKK+KLQ
Sbjct: 7 SRQQYDLTMKLLLVGDSGVGKSCLLLRFVDDSFNPSFITTIGIDFKIRTVEINGKKVKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+++ W + +++HANED + ++G
Sbjct: 67 IWDTAGQERFRTITTAYYRGAMGIILVYDVTDERSFNSVHNWYQTLNQHANEDAQLFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE + +
Sbjct: 127 NKCD-------------------------------------------DEESRQ------- 136
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K +GE +A E GV F+E SAK+N N++ F+ELA +K R+ + P ID
Sbjct: 137 -VTKEQGEQLASELGVPFLEASAKSNKNVDAIFLELAKRFEEKM--RNTQQGPGSAGID 192
>gi|327292479|ref|XP_003230938.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326466875|gb|EGD92328.1| GTP-binding protein [Trichophyton rubrum CBS 118892]
gi|326481140|gb|EGE05150.1| GTP-binding protein [Trichophyton equinum CBS 127.97]
Length = 206
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 147/256 (57%), Gaps = 60/256 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYR AMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D G+E+ V
Sbjct: 125 CD--GEEK-------------------------------------------------RAV 133
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI-YDKTSGRDPLEAPDRVTIDKK 242
+G+ +A E G+ F+E SAK NIN++KAF LAT I D + V ID
Sbjct: 134 TVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSKAEQAGSQGVNID-- 191
Query: 243 PDRGGMAGG-----CC 253
++ G AGG CC
Sbjct: 192 -NQNGGAGGSLGKSCC 206
>gi|302673708|ref|XP_003026540.1| hypothetical protein SCHCODRAFT_71151 [Schizophyllum commune H4-8]
gi|300100223|gb|EFI91637.1| hypothetical protein SCHCODRAFT_71151 [Schizophyllum commune H4-8]
Length = 209
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/260 (44%), Positives = 149/260 (57%), Gaps = 59/260 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D T++K+
Sbjct: 121 GNKS--------------------------DWTDKKA----------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--SGRDPLEA----- 233
V + +G +A E G++FMETSAK N +E+AF LA I + S D A
Sbjct: 132 --VTEEQGRELANELGIKFMETSAKVNEGVEEAFFTLARDIKTRLIDSQTDAATASTTQN 189
Query: 234 PDRVTIDKKPDRGGMAGGCC 253
PD V I + + GCC
Sbjct: 190 PDAVRIGQGAN-ATAGNGCC 208
>gi|353242246|emb|CCA73906.1| probable SEC4-like Rab/GTPase [Piriformospora indica DSM 11827]
Length = 208
Score = 199 bits (506), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 136/225 (60%), Gaps = 51/225 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 7 YDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+L+YD+T+EKSF+NI W NI++HA+E V K+++G D
Sbjct: 67 AGQERFRTITTAYYRGAMGILLIYDVTDEKSFNNIRTWHANIEQHASEGVNKILIGNKSD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + + V
Sbjct: 127 WSDKRQ---------------------------------------------------VTP 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP 230
+G A+A E+G++FMETSAK N +E AF LA I + +P
Sbjct: 136 EQGRALADEFGIKFMETSAKVNDGVEDAFFTLARDIKTRLIDSNP 180
>gi|302766964|ref|XP_002966902.1| rab family GTPase [Selaginella moellendorffii]
gi|300164893|gb|EFJ31501.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 54/242 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+ KLLLIGDSGVGK+CVL RFSDD+F T+FI+TIGIDFKI+T++L G+++KLQ+WDT
Sbjct: 13 HDYRIKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDT 72
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI+++A+E+V ++++G D
Sbjct: 73 AGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNASENVSRVLVGNKAD 132
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R +TT+
Sbjct: 133 MDESKR--AVTTA----------------------------------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI---YDKTSGRDPLEAPDRVTIDKK 242
+G+A+A EYG+RF ETSAK N+E+ F +A I +++ P A + I +
Sbjct: 144 -QGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEESEAARPEVASSNIQI-TR 201
Query: 243 PD 244
PD
Sbjct: 202 PD 203
>gi|302755370|ref|XP_002961109.1| rab family GTPase [Selaginella moellendorffii]
gi|300172048|gb|EFJ38648.1| rab family GTPase [Selaginella moellendorffii]
Length = 221
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 148/242 (61%), Gaps = 54/242 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+ KLLLIGDSGVGK+CVL RFSDD+F T+FI+TIGIDFKI+T++L G+++KLQ+WDT
Sbjct: 13 HDYRIKLLLIGDSGVGKSCVLLRFSDDSFTTSFITTIGIDFKIRTIELDGRRVKLQVWDT 72
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI+++A+E+V ++++G D
Sbjct: 73 AGQERFRTITTAYYRGAMGIILVYDVTDESSFNNIRNWVKNIEQNASENVSRVLVGNKAD 132
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R +TT+
Sbjct: 133 MDESKR--AVTTA----------------------------------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI---YDKTSGRDPLEAPDRVTIDKK 242
+G+A+A EYG+RF ETSAK N+E+ F +A I +++ P A + I +
Sbjct: 144 -QGQALANEYGIRFFETSAKTGQNVEETFFAIARDIKRRLEESEAARPEVASSNIQI-TR 201
Query: 243 PD 244
PD
Sbjct: 202 PD 203
>gi|15232784|ref|NP_187601.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
gi|75204351|sp|Q9SF91.1|RAE1E_ARATH RecName: Full=Ras-related protein RABE1e; Short=AtRABE1e; AltName:
Full=Ras-related protein Rab8E; Short=AtRab8E
gi|6681329|gb|AAF23246.1|AC015985_4 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|21536596|gb|AAM60928.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|90568022|gb|ABD94081.1| At3g09900 [Arabidopsis thaliana]
gi|110738463|dbj|BAF01157.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332641307|gb|AEE74828.1| RAB GTPase-like protein E1E [Arabidopsis thaliana]
Length = 218
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 147/241 (60%), Gaps = 50/241 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKI+TV+L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI++HA++ V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPT---- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N N+E+ F+ +A I + + D P + I K
Sbjct: 142 ----SKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQGIKITK 197
Query: 242 K 242
+
Sbjct: 198 Q 198
>gi|148678838|gb|EDL10785.1| RAB8A, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149036167|gb|EDL90833.1| RAB8A, member RAS oncogene family, isoform CRA_c [Rattus
norvegicus]
Length = 138
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/109 (85%), Positives = 103/109 (94%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHAN 112
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+E N
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEEGN 111
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 46/53 (86%), Gaps = 1/53 (1%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+E N PQ
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEEGN-SPQ 114
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 151/249 (60%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T+E++ V
Sbjct: 123 ------------------------CDLTSERA-------------------------VSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+A A E G+ FMETSAK + N+E+AF+ +A++I D+ + + A P V I +P
Sbjct: 134 DTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
G GCC
Sbjct: 193 -VGQKSGCC 200
>gi|390603944|gb|EIN13335.1| rab-type small GTP-binding protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 210
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 149/261 (57%), Gaps = 59/261 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + D+ A
Sbjct: 121 GNKCDWS-----------------------------------------DKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA----TAIYDKTSGRDPLEAPDR 236
V + +G+A+A E G++FMETSAK N +E+AF LA T + D + +
Sbjct: 132 --VTEEQGKALADELGIKFMETSAKVNEGVEEAFFLLARDIKTRLIDSQADAAGAQGGAS 189
Query: 237 VTIDK----KPDRGGMAGGCC 253
+P + AGGCC
Sbjct: 190 GADGSVRVNQPSQATTAGGCC 210
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/249 (42%), Positives = 151/249 (60%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T+E++ V
Sbjct: 123 ------------------------CDLTSERA-------------------------VSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+A A E G+ FMETSAK + N+E+AF+ +A++I D+ + + A P V I +P
Sbjct: 134 DTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
G GCC
Sbjct: 193 -VGQKSGCC 200
>gi|315040511|ref|XP_003169633.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
gi|311346323|gb|EFR05526.1| GTP-binding protein [Arthroderma gypseum CBS 118893]
Length = 206
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 145/253 (57%), Gaps = 54/253 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYR AMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D G+E+ V
Sbjct: 125 CD--GEEK-------------------------------------------------RAV 133
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI-YDKTSGRDPLEAPDRVTIDKK 242
+G+ +A E G+ F+E SAK NIN++KAF LAT I D + V ID +
Sbjct: 134 TVEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVFKAEQAGSQGVNIDNQ 193
Query: 243 PDRGGMAGG--CC 253
G + G CC
Sbjct: 194 NGGAGSSLGKSCC 206
>gi|351704867|gb|EHB07786.1| Ras-related protein Rab-13 [Heterocephalus glaber]
Length = 206
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/238 (45%), Positives = 146/238 (61%), Gaps = 58/238 (24%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DT----AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMI 119
+GQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++
Sbjct: 63 SGSIFFSGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLL 122
Query: 120 LGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV 179
LG D + + ++W
Sbjct: 123 LGNKCDMEARRK------------------------------VQW--------------- 137
Query: 180 NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR---DPLEAP 234
R + +ARE+G+RF ETSAK+++N+++AF LA I K+ R D AP
Sbjct: 138 ------ERADQLAREHGIRFFETSAKSSVNVDEAFSSLARDILLKSGARRLGDGSRAP 189
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 143/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
N V
Sbjct: 125 LTS---------------------------------------------------NKVVSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+ +A A E G+ FMETSAK N+E+AF+ ++ AI D+ + + + T+ K
Sbjct: 134 EQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAMNNAKPSTVQFKGQP 193
Query: 246 GGMAGGCC 253
GGCC
Sbjct: 194 VEQKGGCC 201
>gi|349803593|gb|AEQ17269.1| putative member ras oncogene family [Pipa carvalhoi]
Length = 114
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/107 (88%), Positives = 101/107 (94%)
Query: 19 GVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSY 78
GVGKTCVLFRFSDDAFNT FISTIGIDFKIKTV+L+GKKIKLQIWDTAGQERFHTITTSY
Sbjct: 1 GVGKTCVLFRFSDDAFNTAFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSY 60
Query: 79 YRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
YRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDV++M+LG D
Sbjct: 61 YRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVKRMLLGNKCD 107
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 50/53 (94%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ 177
DTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANED +
Sbjct: 46 DTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVK 98
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 144/248 (58%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + SY
Sbjct: 125 LA-----ESRVVSY---------------------------------------------- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+A+A E G+ F+ETSAK N+EKAF+ +A I ++ + + A T+ +
Sbjct: 134 EAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAANASKPATVQMRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VAQQNGCC 201
>gi|116196288|ref|XP_001223956.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
gi|88180655|gb|EAQ88123.1| hypothetical protein CHGG_04742 [Chaetomium globosum CBS 148.51]
Length = 206
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/246 (43%), Positives = 143/246 (58%), Gaps = 63/246 (25%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQ
Sbjct: 4 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 63
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA E V K+++G
Sbjct: 64 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIG 123
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W E+ +VV++
Sbjct: 124 NKCD--------------------------------------W---------EEKRVVST 136
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
RG+ +A E + F+E SAK N NI+KAF LA I R+
Sbjct: 137 ----ERGQQLADELNIPFLEVSAKTNNNIDKAFYSLAADI------------KKRIIDTS 180
Query: 242 KPDRGG 247
KPD+ G
Sbjct: 181 KPDQAG 186
>gi|392596937|gb|EIW86259.1| rab-type small GTP-binding protein [Coniophora puteana RWD-64-598
SS2]
Length = 208
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/258 (43%), Positives = 145/258 (56%), Gaps = 56/258 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFKNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA----TAIYDKTSGRD-PLEAPD 235
V + G +A E GV+FMETSAK N +E+AF LA T + D + P A +
Sbjct: 132 --VTEEEGRELANELGVKFMETSAKVNEGVEEAFFTLARDIKTRLIDSQADSALPSGAGN 189
Query: 236 RVTIDKKPDRGGMAGGCC 253
++ +G CC
Sbjct: 190 ADSVKVNQPAAASSGSCC 207
>gi|431892392|gb|ELK02832.1| Ras-related protein Rab-13 [Pteropus alecto]
Length = 184
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/239 (45%), Positives = 144/239 (60%), Gaps = 64/239 (26%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 SDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK 242
+ + +ARE+G+RF ETSAK+++N+++ SG+ P + D T DKK
Sbjct: 132 PGEQADKLAREHGIRFFETSAKSSMNVDEG-----------NSGKPP--SADLKTGDKK 177
>gi|336365713|gb|EGN94062.1| hypothetical protein SERLA73DRAFT_77997 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378321|gb|EGO19479.1| hypothetical protein SERLADRAFT_401850 [Serpula lacrymans var.
lacrymans S7.9]
Length = 210
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 135/221 (61%), Gaps = 51/221 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
V + +G +A E G+RFMETSAK N +E+AF LA I
Sbjct: 132 --VTEEQGRELAEELGIRFMETSAKVNDGVEEAFFTLARDI 170
>gi|21592670|gb|AAM64619.1| putative Ras-like GTP-binding protein [Arabidopsis thaliana]
Length = 216
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 150/256 (58%), Gaps = 54/256 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKI+TV+L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI++HA+++ K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNFNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPTA--- 142
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E F+ +A I + + D P + I K
Sbjct: 143 -----KGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKAEPQGIKITK 197
Query: 242 KPDRGGMA----GGCC 253
+ + CC
Sbjct: 198 QDTAASSSTAEKSACC 213
>gi|302666103|ref|XP_003024654.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
gi|291188720|gb|EFE44043.1| hypothetical protein TRV_01171 [Trichophyton verrucosum HKI 0517]
Length = 1174
Score = 197 bits (502), Expect = 3e-48, Method: Composition-based stats.
Identities = 109/255 (42%), Positives = 144/255 (56%), Gaps = 60/255 (23%)
Query: 5 TYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWD 64
T+ KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIWD
Sbjct: 974 TFTLQIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 1033
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
TAGQERF TITT+YYR AMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 1034 TAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKC 1093
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D G+E+ V
Sbjct: 1094 D--GEEK-------------------------------------------------RAVT 1102
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI-YDKTSGRDPLEAPDRVTIDKKP 243
+G+ +A E G+ F+E SAK NIN++KAF LAT I D + V ID
Sbjct: 1103 VEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEIKKDMDVSKAEQAGSQGVNID--- 1159
Query: 244 DRGGMAGG-----CC 253
++ G AGG CC
Sbjct: 1160 NQNGGAGGSLGKSCC 1174
>gi|403414723|emb|CCM01423.1| predicted protein [Fibroporia radiculosa]
Length = 209
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 111/251 (44%), Positives = 142/251 (56%), Gaps = 64/251 (25%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V + +G +A E G++FMETSAK N +E AF LA I + ID
Sbjct: 132 --VTEEQGRELADELGIKFMETSAKVNEGVEDAFFTLARDIKAR-------------LID 176
Query: 241 KKPDRGGMAGG 251
+P+ G G
Sbjct: 177 SQPEATGAPSG 187
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/228 (45%), Positives = 140/228 (61%), Gaps = 53/228 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+C+L RFS+D F ++FI+TIGIDFKI+TV+L GK++KLQ
Sbjct: 4 GSQQYDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQ 63
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TIT +YYRGA GI+L YD+T+E SF+N+ W+RNI++HA++ V K+++G
Sbjct: 64 IWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMRNIEQHASDGVSKVLVG 123
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D E+ +V+++
Sbjct: 124 NKSDA-----------------------------------------------EEKRVIST 136
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD--KTSG 227
+GEA+A+E+G+ F ETSAKAN N+ AF +A I KTSG
Sbjct: 137 ----EQGEALAKEFGIPFFETSAKANTNVNDAFFAIARIIKAGLKTSG 180
>gi|61676643|gb|AAX51845.1| Rab-type small GTP-binding protein [Paxillus involutus]
Length = 210
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 147/262 (56%), Gaps = 62/262 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA++ V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASDGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D W D+ A
Sbjct: 121 GNKSD--------------------------------------W---TDKRA-------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA----TAIYDKTSGRDPLEAPDR 236
V + +G +A E G+RFMETSAK N +E AF LA T + D S D +P
Sbjct: 132 --VTEDQGRELANELGIRFMETSAKVNDGVEDAFFTLARDCKTRLID--SQADATGSPGS 187
Query: 237 V-----TIDKKPDRGGMAGGCC 253
++ AGGCC
Sbjct: 188 AGNADGSVKVNQPTTQAAGGCC 209
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 145/248 (58%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F
Sbjct: 125 LTAKK------------------VVDYQTAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A E G+ F+ETSAK IN+E AF+ +A I ++ + + + + T+ K
Sbjct: 140 ------ADEIGIPFLETSAKNAINVEDAFMTMAAEIKNRMASQPAMNSTRPTTVQMKGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VVPKSGCC 201
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 144/248 (58%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + SY
Sbjct: 125 LA-----ESRVVSY---------------------------------------------- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+A+A E G+ F+ETSAK N+EKAF+ +A I ++ + + A T+ +
Sbjct: 134 EAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAGNASKPATVQMRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VAQQNGCC 201
>gi|240281309|gb|EER44812.1| GTP-binding protein [Ajellomyces capsulatus H143]
Length = 204
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 145/246 (58%), Gaps = 53/246 (21%)
Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQE 69
KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIWDTAGQE
Sbjct: 10 IKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQE 69
Query: 70 RFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQ 129
RF TITT+YYRGAMGI+LVYD+T+E+SF+NI W N+++HA+E V KM++G D
Sbjct: 70 RFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHASEGVHKMLIGNKCD---- 125
Query: 130 ERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGE 189
W E+ + V + +G+
Sbjct: 126 ----------------------------------W---------EEKRAVTT----EQGQ 138
Query: 190 AIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKK-PDRGG 247
+A E G+ F+E SAK NIN+EKAF LA+ I +A + VTID + G
Sbjct: 139 KLADELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQAGSQGVTIDHQGSGVGN 198
Query: 248 MAGGCC 253
+ G CC
Sbjct: 199 LGGKCC 204
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ YD E
Sbjct: 125 LTANR----------------VVSYDTAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + G+ FMETSAK N+E AF+ +A AI D+ + + T+ +
Sbjct: 139 -----FADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
G GGCC
Sbjct: 194 VGQKGGCC 201
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 150/254 (59%), Gaps = 62/254 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A ++ V D K+F
Sbjct: 125 LASKK------------------VVDYATAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA---PDRVTIDKK 242
A E G+ F+ETSAK N+E+AF+ +A I ++ + + L + P+ V +
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSSTSRPNNVQL--- 190
Query: 243 PDRGGM---AGGCC 253
RG GGCC
Sbjct: 191 --RGQTILPKGGCC 202
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 140/249 (56%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFLFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQVSFNNVKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ +T Y A+ I
Sbjct: 125 LTSKKVIDYVTAKEYADALDI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD-RVTIDKKPD 244
F+ETSAK N+E+AF+ +A I + AP V I KP
Sbjct: 146 ------------PFLETSAKNATNVEQAFLTMAAEIKKRMGPSSAASAPTGNVKIQSKPV 193
Query: 245 RGGMAGGCC 253
+GGCC
Sbjct: 194 ADNKSGGCC 202
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 196 bits (499), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A N V
Sbjct: 125 LAE---------------------------------------------------NRVVSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTIDKKP 243
G+A+A E G+ F+ETSAK N+EKAF+ +A I ++ + GR P V + ++P
Sbjct: 134 EAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQGRTNASKPATVQMPRQP 193
Query: 244 DRGGMAGGCC 253
CC
Sbjct: 194 --VAQQSSCC 201
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A N V
Sbjct: 125 LAE---------------------------------------------------NRVVSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+A+A E G+ F+ETSAK N+EKAF+ +A I ++ + + A T+ +
Sbjct: 134 EAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VAQQSSCC 201
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 152/249 (61%), Gaps = 41/249 (16%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +++ + + ++++ +T+
Sbjct: 125 LTANK---VVSSETAKVILNFVVLFLLTS------------------------------- 150
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
A A E G+ FMETSAK N+E+AF+ +A I ++ + + A P V I +P
Sbjct: 151 ----AFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNARPPTVQIRGQP- 205
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 206 -VNQKAGCC 213
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 148/253 (58%), Gaps = 31/253 (12%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGI---MLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
++ T R A+ + V W
Sbjct: 125 LTTKKVVDNTTAKVSRPALAVGSGSHVPSPLLPLLLSLFFPW------------------ 166
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTID 240
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID
Sbjct: 167 ------QEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKID 219
Query: 241 KKPDRGGMAGGCC 253
P + +GGCC
Sbjct: 220 STPVKSA-SGGCC 231
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/252 (42%), Positives = 149/252 (59%), Gaps = 56/252 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK+IKLQIWDT
Sbjct: 7 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G D
Sbjct: 67 AGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ER +TT
Sbjct: 127 VDPSER--AVTT------------------------------------------------ 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPD--RVTIDK 241
+G+ +A E+G++F ETSAK+N NI++AF +A I + S D L+ + + +D+
Sbjct: 137 KQGQDLADEFGIKFFETSAKSNENIDEAFRSIAVDIQKRLAESEHDRLDVANGSKFRVDE 196
Query: 242 KPDRGGMAGGCC 253
D+ GCC
Sbjct: 197 SQDQ--TKDGCC 206
>gi|351726990|ref|NP_001238169.1| GTP binding protein [Glycine max]
gi|450635|gb|AAA50159.1| GTP binding protein [Glycine max]
Length = 218
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 149/250 (59%), Gaps = 40/250 (16%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITN-EKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
AGQERF TIT+SYYRGA GI++VYD+T+ E+SF+N+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDGEESFNNVKQWLSEIDRYASDNVNKLLVGNKC 124
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D I T+ D+ ++ NI
Sbjct: 125 DLEANRAVSNIETA------------DLEANRAVSNI----------------------- 149
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKP 243
+A A G+ F+ETSAK N+E+AF+ + +I D+ + + A P V I +P
Sbjct: 150 -ETAKAFADGIGIPFIETSAKDATNVEQAFMAMTASIKDRMASQPANNARPPTVQIRGQP 208
Query: 244 DRGGMAGGCC 253
GGCC
Sbjct: 209 --VAQKGGCC 216
>gi|260942787|ref|XP_002615692.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
gi|238850982|gb|EEQ40446.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
Length = 204
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 140/250 (56%), Gaps = 53/250 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
++YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ GKKIKLQ+W
Sbjct: 8 RSYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESNGKKIKLQVW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L+YD+T+ ++F+N+ W + + +HANED + ++G
Sbjct: 68 DTAGQERFRTITTAYYRGAMGIVLIYDVTDARTFENVENWFQTVTQHANEDAQIFLVGNK 127
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D DE N V
Sbjct: 128 SD-------------------------------------------DEE--------NRQV 136
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ +G+ +A + F+E SAK N N+E F ELA+ I +K +P++ ID
Sbjct: 137 SREQGQQLASSLNIPFLEASAKTNENVESIFYELASLIQEKHIDEEPVQRS--TGIDVSS 194
Query: 244 DRGGMAGGCC 253
G+ CC
Sbjct: 195 TGNGIKNNCC 204
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 132/180 (73%), Gaps = 6/180 (3%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L+GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA + V KM++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCD 131
Query: 126 TAGQE-----RFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRN-IDEHANEDPQVV 179
A ++ R ++ Y + I E++F ++ K ++ + + NE PQVV
Sbjct: 132 MAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEQPQVV 191
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 19/127 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE---------- 174
DTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA +
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNK 129
Query: 175 ----DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP 230
+ +VV+S RG+++A EYG++F+ETSAK +IN+E+AFI LA I K P
Sbjct: 130 CDMAEKKVVDS----SRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDI-KKRMIDTP 184
Query: 231 LEAPDRV 237
E P V
Sbjct: 185 NEQPQVV 191
>gi|256066501|ref|XP_002570541.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
gi|350645538|emb|CCD59778.1| rab15, 13, 10, 1, 35, 5, and, putative [Schistosoma mansoni]
Length = 211
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 141/254 (55%), Gaps = 57/254 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD ++KLLL+GDS VGKT +L RFSD++F+ TFI+TIGIDFK++T+++ GKKIKLQIW
Sbjct: 9 KDYDEMYKLLLVGDSSVGKTNLLLRFSDNSFSKTFIATIGIDFKVRTIEIDGKKIKLQIW 68
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TN S+ NI W+ NI EH NE V KM+LG
Sbjct: 69 DTAGQERFRTITTAYYRGAMGIMLVYDVTNLDSYHNITTWMNNITEHTNEGVAKMLLGNK 128
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D Q ++K+
Sbjct: 129 CDLEAQR------------------------------VVKY------------------- 139
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI---- 239
G +A+ YG+ F+ETSAK IN+ +AF LA I K L P R I
Sbjct: 140 --ENGFKLAQSYGISFIETSAKGGINVSEAFTILARKIKAKREQEANLNNPPREDIRNIT 197
Query: 240 DKKPDRGGMAGGCC 253
K+P R + GC
Sbjct: 198 SKRPKR--LMWGCS 209
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 149/251 (59%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A ++ V D K+F
Sbjct: 125 LASKK------------------VVDYETAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA---PDRVTIDKK 242
A E G+ F+ETSAK N+E+AF+ +A I ++ + + L + P+ VT + +
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSSTSKPNNVT-NLR 192
Query: 243 PDRGGMAGGCC 253
GCC
Sbjct: 193 GQAIPQKSGCC 203
>gi|449491717|ref|XP_004174631.1| PREDICTED: ras-related protein Rab-8A isoform 2 [Taeniopygia
guttata]
Length = 181
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/108 (83%), Positives = 100/108 (92%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC LFRFS+DAFN TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHA 111
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+E
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEQG 110
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/111 (56%), Positives = 73/111 (65%), Gaps = 16/111 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+E
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEQ------------- 109
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD 235
GE +A +G++FMETSAKANINIE AF LA I K + +P
Sbjct: 110 ---GEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQ 157
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 136/221 (61%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF DD FN +FI+TIGIDFKIKTVD+ GKKIKLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKIKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN+D + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIRQWFKTVNEHANDDAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D T T +Y
Sbjct: 135 SD------MDTRTVTY-------------------------------------------- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 145 --EQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
>gi|83771518|dbj|BAE61650.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 248
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 149/248 (60%), Gaps = 21/248 (8%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 22 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 81
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 82 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 141
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V + T K ++ + ++++ + PQ +
Sbjct: 142 MEDKK------------------VVEYTVAKVCSSLYLFPYSLEQTTSAFPQSARRLI-- 181
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
R A G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 182 -RYIEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 240
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 241 SGSAGGCC 248
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 149/249 (59%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T ++ V
Sbjct: 123 ------------------------CDLTENRA-------------------------VPY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+A A E G+ FMETSAK + N+E+AF+ +A++I ++ + + A P V I +P
Sbjct: 134 ETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKERMASQPTNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
G GCC
Sbjct: 193 -VGQKSGCC 200
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%), Gaps = 54/232 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+++TYD L KLLLIGDSGVGK+C+L RF +D F +FI+TIGIDFKI+T+D+ +++KLQ
Sbjct: 4 SQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQ 63
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI W +N+ +ANE VE +++G
Sbjct: 64 VWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVG 123
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE +VV++
Sbjct: 124 NKCD------------------------------------------LDEK-----RVVST 136
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD---KTSGRDP 230
+G+A+A ++G+ F+E S+K NIN+E+ F +AT I D KT G +
Sbjct: 137 ----EQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKGNES 184
>gi|440803267|gb|ELR24175.1| RabE family small GTPase, partial [Acanthamoeba castellanii str.
Neff]
Length = 155
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/124 (70%), Positives = 108/124 (87%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
K+ YD+L KLLLIGDSGVGK+C+L RFSDD+F +FI+TIGIDFKI+T++L+GK+IKLQ
Sbjct: 10 GKQAYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELEGKRIKLQ 69
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA E V KM++G
Sbjct: 70 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIG 129
Query: 122 KTKD 125
D
Sbjct: 130 NKSD 133
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 61/88 (69%), Gaps = 18/88 (20%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE---------- 174
DTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA E
Sbjct: 72 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATESVNKMLIGNK 131
Query: 175 ----DPQVVNSWVCKHRGEAIAREYGVR 198
D +V+++ RG+ +A EYG+R
Sbjct: 132 SDMVDKKVIDT----ARGKGLADEYGIR 155
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 147/253 (58%), Gaps = 58/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TVDL+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +ANE+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F
Sbjct: 125 LTAKK------------------VVDYQTAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL-EAPDRVTIDKKPD 244
A E G+ F+ETSAK N+E+AF+++A I ++ + + L P T+ +P
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEEAFMKMAGEIKNRMASQPALNNGPKGATV--RPG 191
Query: 245 RG----GMAGGCC 253
G CC
Sbjct: 192 EGRPVNANKSNCC 204
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 148/250 (59%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L+GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKAD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T T + +GI
Sbjct: 125 LTAKKVVDTQTAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA--PDRVTIDKKP 243
F+ETSAK N+E+AF+ +A I ++ + + + + P+ V+++K
Sbjct: 146 ------------PFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSNKPNNVSLNKGQ 193
Query: 244 DRGGMAGGCC 253
GGCC
Sbjct: 194 PL-NQKGGCC 202
>gi|325181454|emb|CCA15881.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2006
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 137/228 (60%), Gaps = 50/228 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1278 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1337
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1338 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1397
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1398 NKCDVDPSER-------------------AVTTEQ------------------------- 1413
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD 229
G+ +A E+G+ F ETSAK+NINI+ AF +A I + + D
Sbjct: 1414 ------GQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1455
>gi|325181447|emb|CCA15867.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 137/228 (60%), Gaps = 50/228 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1335 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1394
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1395 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1454
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1455 NKCDVDPSER-------------------AVTTEQ------------------------- 1470
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD 229
G+ +A E+G+ F ETSAK+NINI+ AF +A I + + D
Sbjct: 1471 ------GQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1512
>gi|325181449|emb|CCA15870.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2027
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 137/228 (60%), Gaps = 50/228 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1307 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1366
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1367 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1426
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1427 NKCDVDPSER-------------------AVTTEQ------------------------- 1442
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD 229
G+ +A E+G+ F ETSAK+NINI+ AF +A I + + D
Sbjct: 1443 ------GQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1484
>gi|325181455|emb|CCA15884.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2025
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 137/228 (60%), Gaps = 50/228 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1305 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1364
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1365 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1424
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1425 NKCDVDPSER-------------------AVTTEQ------------------------- 1440
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD 229
G+ +A E+G+ F ETSAK+NINI+ AF +A I + + D
Sbjct: 1441 ------GQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1482
>gi|325181452|emb|CCA15877.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2062
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 137/228 (60%), Gaps = 50/228 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1334 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1393
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1394 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1453
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1454 NKCDVDPSER-------------------AVTTEQ------------------------- 1469
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD 229
G+ +A E+G+ F ETSAK+NINI+ AF +A I + + D
Sbjct: 1470 ------GQELADEFGIEFFETSAKSNINIDAAFHAIAVDIQKRLAESD 1511
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 142/251 (56%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+LFRF+DD + ++ISTIG+DFKI+TV+L+GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ WL ID +ANE+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKTWLSEIDRYANENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F
Sbjct: 125 LTSKK------------------VVDYATAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A E G+ FMETSAK N+E+AF+ +A I + + + + +P
Sbjct: 140 ------ADEIGIPFMETSAKNATNVEQAFVTMANEIKTRMASQPQAASGASRGATIRPGE 193
Query: 246 G---GMAGGCC 253
G CC
Sbjct: 194 GRPVNAKSSCC 204
>gi|328866656|gb|EGG15039.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 202
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 144/249 (57%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y +LFKLLLIGDSGVGK+C+L RF+DD ++ +FISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +FDN+ +WL+ ID A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F ++L+
Sbjct: 125 LVAKK------------------VVDYNTAKAFADLLQ---------------------- 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+ F+ETSAK + N+E+AF+ +AT I ++ + P + DR + +
Sbjct: 145 -----------IPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTVDRNKVVPGTSQ 193
Query: 246 GGMA-GGCC 253
A GCC
Sbjct: 194 PIQAKSGCC 202
>gi|346321156|gb|EGX90756.1| GTP-binding protein SAS1 [Cordyceps militaris CM01]
Length = 227
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 149/254 (58%), Gaps = 61/254 (24%)
Query: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQ 68
+ KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIWDTAGQ
Sbjct: 26 VIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAGQ 85
Query: 69 ERFHTITTSYYRGAMGIMLVYDITNEKSFD-------NILKWLRNIDEHANEDVEKMILG 121
ERF TITT+YYRGAMGI+LVYD+T+E+SF+ +I W +N+++HA E V K+++G
Sbjct: 86 ERFRTITTAYYRGAMGILLVYDVTDERSFNTHSLTNLDIRTWFQNVEQHATEGVNKILIG 145
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D W ED +V++
Sbjct: 146 NKCD--------------------------------------W---------EDKRVIS- 157
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTI 239
+ +G+A+A E G+ F+E SAK+NINI+KAF LA I + EA V +
Sbjct: 158 ---EEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADIKKRLIDNSKNEAGSSGGVNV 214
Query: 240 DKKPDRGGMAGGCC 253
K + GGM G CC
Sbjct: 215 GDKTE-GGMGGKCC 227
>gi|159490221|ref|XP_001703081.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158270827|gb|EDO96660.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 218
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 139/222 (62%), Gaps = 51/222 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D L KLLL+GDSGVGK+C+L RF+DD F ++FI+TIGIDFKIK VD++GK +KLQIWDT
Sbjct: 9 FDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLVKLQIWDT 68
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT++YYRGA GI+LVYDIT+E SF+N+ W+RNI++HA+++V K+++G D
Sbjct: 69 AGQERFRTITSAYYRGAQGIILVYDITDEGSFNNVRNWMRNIEQHASDNVNKILVGNKLD 128
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + +VV+ +
Sbjct: 129 LS-----------------------------------------------EKRVVS----E 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
RG A+A EYG RF ETSAK N+ +E+AF+ +A + + G
Sbjct: 138 ARGRALADEYGFRFFETSAKDNVCVEEAFLSVAKDVLHRMQG 179
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 146/249 (58%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R EH+
Sbjct: 128 LI-------------------------------------IRRAVEHS------------- 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI-DKKPD 244
+ A + G+ F+ETSAK++ N+E+AF+ +A+ I ++ + V I +P
Sbjct: 138 -AAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGTGPSVRIGGSQPV 196
Query: 245 RGGMAGGCC 253
+GGCC
Sbjct: 197 NEKKSGGCC 205
>gi|402890290|ref|XP_003908421.1| PREDICTED: ras-related protein Rab-10 [Papio anubis]
Length = 179
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/224 (51%), Positives = 132/224 (58%), Gaps = 57/224 (25%)
Query: 32 DAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI 91
+ +N T S GIDFKIKTV+L+GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI
Sbjct: 11 NIWNQTQPSLKGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDI 70
Query: 92 TNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYD 151
TN KSF+NI KWLRNIDEHANEDVE+M+LG D
Sbjct: 71 TNGKSFENISKWLRNIDEHANEDVERMLLGNKCDM------------------------- 105
Query: 152 ITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIE 211
+D +VV K +GE IARE+G+RF ETSAKANINIE
Sbjct: 106 ----------------------DDKRVVP----KGKGEQIAREHGIRFFETSAKANINIE 139
Query: 212 KAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDRG--GMAGGCC 253
KAF+ LA I KT P++ P+ +D G G CC
Sbjct: 140 KAFLTLAEDILRKT----PVKEPNSENVDISSGGGVTGWKSKCC 179
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 146/249 (58%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+R EH+
Sbjct: 128 LI-------------------------------------IRRAVEHS------------- 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI-DKKPD 244
+ A + G+ F+ETSAK++ N+E+AF+ +A+ I ++ + V I +P
Sbjct: 138 -AAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGTGPSVRIGGSQPV 196
Query: 245 RGGMAGGCC 253
+GGCC
Sbjct: 197 NEKKSGGCC 205
>gi|302507522|ref|XP_003015722.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
gi|291179290|gb|EFE35077.1| hypothetical protein ARB_06033 [Arthroderma benhamiae CBS 112371]
Length = 425
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 131/217 (60%), Gaps = 51/217 (23%)
Query: 5 TYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWD 64
T+ KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIWD
Sbjct: 225 TFTLQIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTINLDGKRVKLQIWD 284
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
TAGQERF TITT+YYR AMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 285 TAGQERFRTITTAYYRNAMGILLVYDVTDERSFKNIRTWFSNVEQHASEGVHKILIGNKC 344
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D G+E+ V
Sbjct: 345 D--GEEK-------------------------------------------------RAVT 353
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+ +A E G+ F+E SAK NIN++KAF LAT I
Sbjct: 354 VEQGQQLANELGIPFLEVSAKNNINVDKAFYSLATEI 390
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 147/251 (58%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD ++ T+ISTIG+DFKI+T++L+GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SFDN+ +WL I+ +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQWLTEIERYACENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+++ D T K+F
Sbjct: 125 LQSKKQV------------------DYTTAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID---KK 242
A E G+ F+ETSAK+ N+E+AF+ +A+ I + + T+ K
Sbjct: 140 ------ADERGIPFLETSAKSATNVEQAFMTMASEIKARMGPAGASNDTSKGTVSMKAGK 193
Query: 243 PDRGGMAGGCC 253
P G GGCC
Sbjct: 194 PVSSG-GGGCC 203
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 147/250 (58%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
A G+ F+ETSAK++ N+E+AF+ +A I + A ++ V I KP
Sbjct: 140 ------ADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGASEKSNVKIQSKP 193
Query: 244 DRGGMAGGCC 253
+GGCC
Sbjct: 194 VNTS-SGGCC 202
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 147/251 (58%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F
Sbjct: 125 LTAKK------------------VVDYQTAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A E G+ F+ETSAK N+E+AF+ +A I ++ + + + A TI P R
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSAAKPTTI---PLR 190
Query: 246 GGM---AGGCC 253
G + CC
Sbjct: 191 GQVLQHKPNCC 201
>gi|348677661|gb|EGZ17478.1| hypothetical protein PHYSODRAFT_351206 [Phytophthora sojae]
Length = 207
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 134/216 (62%), Gaps = 50/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK+IKLQIWDT
Sbjct: 7 YDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T++ SF NI W+ I ++A+ +V K+++G D
Sbjct: 67 AGQERFRTITTAYYRGAMGILLVYDVTDDHSFQNIRNWMTQIRQNASSNVNKILIGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ER +TT
Sbjct: 127 VDPSER--AVTT------------------------------------------------ 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+G+ +A E+G++F ETSAK+N NI++AF +A I
Sbjct: 137 KQGQDLADEFGIKFFETSAKSNKNIDEAFRSIAVDI 172
>gi|395326128|gb|EJF58541.1| rab-type small GTP-binding protein [Dichomitus squalens LYAD-421
SS1]
Length = 210
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 111/251 (44%), Positives = 142/251 (56%), Gaps = 64/251 (25%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFL KLLLIGDSGVGK+C+L RF DDA+ +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPHYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + +T E+ E ANE
Sbjct: 121 GNKSDWTEKRA--------------------VTEEQG-----------RELANE------ 143
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
G++FMETSAK N +E+AF LA I + ID
Sbjct: 144 --------------LGIKFMETSAKVNEGVEEAFFTLARDIKTR-------------LID 176
Query: 241 KKPDRGGMAGG 251
+ + G AGG
Sbjct: 177 SQAESSGAAGG 187
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 149/251 (59%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K + + LK
Sbjct: 127 LTTKK------------------VVDYTTAKEYADTLK---------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP---DRVTIDKK 242
+ F+ETSAK N+E+AF+ +A I ++ G +P ++V I K
Sbjct: 147 -----------IPFLETSAKTANNVEQAFMTMAAEIKNRM-GPGTAASPGQSNKVDISSK 194
Query: 243 PDRGGMAGGCC 253
P G GGCC
Sbjct: 195 P-VDGKQGGCC 204
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 145/249 (58%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y +LFKLLLIGDSGVGK+C+L RF+DD ++ +FISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ +F+N+ +WL+ ID A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F + L+
Sbjct: 125 LVAKK------------------VVDYNTAKAFADSLQ---------------------- 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKKPD 244
+ F+ETSAK + N+E+AF+ +AT I ++ + P + PD+ + +
Sbjct: 145 -----------IPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQTPDKNKVVPGQSA 193
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 194 PISTKSGCC 202
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 141/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 125 LTTKK------------------VVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + + F+E SAK N+E+AF+ +A I ++ P +V ID P +
Sbjct: 140 ------ADQLSMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPSGQVKIDSTPVQ 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 SKSGSGCC 201
>gi|357454119|ref|XP_003597340.1| Ras-related protein ARA-3 [Medicago truncatula]
gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355486388|gb|AES67591.1| Ras-related protein ARA-3 [Medicago truncatula]
Length = 213
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 150/257 (58%), Gaps = 57/257 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
++K YD L KLLLIGDSGVGK+ +L RFSD F T++I+T+GID+K + ++L GKKI LQ
Sbjct: 8 SEKNYDHLIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED-VEKMIL 120
+WDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+R+I++H++++ V K+++
Sbjct: 68 VWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIRSIEQHSSDNIVNKILV 127
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +DE P
Sbjct: 128 GNKVD------------------------------------------MDESKRAVPF--- 142
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+G+A+A +YG++F ETSAK N+N+++AF +A I + D + P R+ I+
Sbjct: 143 -----SKGQALANKYGIKFFETSAKTNLNVDEAFFSIARDIKQRLP--DSKKTPSRIRIN 195
Query: 241 KKPD----RGGMAGGCC 253
K + RG CC
Sbjct: 196 KHNNATAARGSQKSECC 212
>gi|344228933|gb|EGV60819.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 203
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 145/252 (57%), Gaps = 58/252 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
++YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGKKIKLQ+W
Sbjct: 8 RSYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQVW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG-K 122
DTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G K
Sbjct: 68 DTAGQERFRTITTAYYRGAMGIVLIYDVTDARSFENVDNWYQTVTQHANEDAQIFLVGNK 127
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D+ G++
Sbjct: 128 CDDSEGRQ---------------------------------------------------- 135
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK 242
V +G+ +A + F+E SAK+NIN++ F ELA+ I DK +P + + + K
Sbjct: 136 VSTEQGQELAARLNIPFLEASAKSNINVDSIFYELASIIQDKNVDAEPEKKSTGIDVSK- 194
Query: 243 PDRGGMA-GGCC 253
G ++ CC
Sbjct: 195 ---GALSKNSCC 203
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 142/249 (57%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A N V
Sbjct: 125 LAE---------------------------------------------------NRVVSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKKPD 244
G+A+A E G+ F+ETSAK N+EKAF+ +A I ++ + + R T+ +
Sbjct: 134 EAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAASGASRPATVQMRGQ 193
Query: 245 RGGMAGGCC 253
CC
Sbjct: 194 PVSQQSSCC 202
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 131/180 (72%), Gaps = 7/180 (3%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKK YDFLFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFK+KT+++ GKK+KL
Sbjct: 1 MAKK-YDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKL 59
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
Q+WDTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ V +M+L
Sbjct: 60 QVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLL 119
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI----LKWLRNIDEHANEDP 176
G D + + T GI T+ KS N+ L R+I + +++ P
Sbjct: 120 GNKCDIEAKRKVSKETGEKLAKDHGIRFFE--TSAKSSINVEESFLALARDILKQSSKKP 177
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 11/131 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHA----------NE 174
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A N+
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVSRMLLGNK 122
Query: 175 DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V K GE +A+++G+RF ETSAK++IN+E++F+ LA I K S + P
Sbjct: 123 CDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDIL-KQSSKKPGPGG 181
Query: 235 DRVTIDKKPDR 245
+V I ++
Sbjct: 182 QQVKITSSTEK 192
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 143/251 (56%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD ++ ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
M V D T K +
Sbjct: 125 ------------------MTTKKVVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD---RVTIDKK 242
A + F+ETSAK N N+E+AF+ +A+ I +K V I K
Sbjct: 140 ------ADSLNIPFLETSAKNNTNVEQAFLTMASEIKNKMGPGSGPSPSGPRGNVDIGKT 193
Query: 243 PDRGGMAGGCC 253
G +GGCC
Sbjct: 194 NSVGNKSGGCC 204
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 143/249 (57%), Gaps = 55/249 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ N V
Sbjct: 125 ----------------------------------------------------LPNRAVSY 132
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+A A E G+ FMETSAK N+E+AF+ + I ++ + + A P V + +P
Sbjct: 133 ESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKNRMASQPANNARPPTVQLQGQP- 191
Query: 245 RGGMAGGCC 253
GGCC
Sbjct: 192 -VNQKGGCC 199
>gi|149246283|ref|XP_001527611.1| GTP-binding protein SAS1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447565|gb|EDK41953.1| GTP-binding protein SAS1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 208
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 100/253 (39%), Positives = 140/253 (55%), Gaps = 52/253 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T+D KGKKIKLQ
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIDSKGKKIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANE+ + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDARSFENVQNWFQTVSQHANEEAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE N
Sbjct: 127 NKCD-------------------------------------------DEE--------NR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-TSGRDPLEAPDRVTID 240
V + +GE +A++ + F+E SAK N N+E F ELA I +K + +D
Sbjct: 136 QVSREQGEELAQKLQIPFLEASAKTNQNVESIFYELAGIIQEKHVDDAAGAGSGGHGGVD 195
Query: 241 KKPDRGGMAGGCC 253
+ G+ CC
Sbjct: 196 VSQNNSGIKNNCC 208
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 145/248 (58%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SFDN+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQWLNEIDRYASDNVVKILVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T+ K VV+S K
Sbjct: 124 -------------------------DLTSNK---------------------VVSSETAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A A E G+ F+ETSAK + N+E+AF+ +A I + + + A T+ +
Sbjct: 138 ----AFADEIGIPFLETSAKNSTNVEQAFMTMAAEIKKRVASQPASNATRPTTVPXRXXX 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 XXQKSNCC 201
>gi|380023908|ref|XP_003695751.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Apis florea]
Length = 208
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 95/141 (67%), Positives = 112/141 (79%), Gaps = 6/141 (4%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFNTTFISTIGI++ + + K IKL+IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGINYHFLLIKI-NKIIKLEIW 61
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+ DVEKM+LG
Sbjct: 62 DTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMLLGNK 121
Query: 124 -----KDTAGQERFHTITTSY 139
K +ER + Y
Sbjct: 122 CELTEKRQVSKERGEQLAVEY 142
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/143 (51%), Positives = 95/143 (66%), Gaps = 19/143 (13%)
Query: 115 VEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE 174
+ K+I + DTAGQERF TITT+YYRGAMGIMLVYD+TNEKSF+NI W+RNI+E+A+
Sbjct: 52 INKIIKLEIWDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKNWIRNIEENASA 111
Query: 175 DPQVV----------NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
D + + V K RGE +A EYG++FMETSAK++IN+E+AF LA I K
Sbjct: 112 DVEKMLLGNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAK 171
Query: 225 TSGRDPLEAPDRVTIDKKPDRGG 247
+ LEA + P +GG
Sbjct: 172 MEKK--LEASN-------PPKGG 185
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 146/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF T+T+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKSA-SGGCC 201
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 145/252 (57%), Gaps = 58/252 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 128 LTTKK------------------VVDFTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD----RVTIDK 241
A + G+ F+ETSAK N+E+AF+ +A I ++ P+ A V I+
Sbjct: 143 ------ADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMG---PITAASDSKPSVKINS 193
Query: 242 KPDRGGMAGGCC 253
GGCC
Sbjct: 194 STPVSANKGGCC 205
>gi|325181450|emb|CCA15872.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2011
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 133/217 (61%), Gaps = 50/217 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1307 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1366
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1367 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1426
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1427 NKCDVDPSER-------------------AVTTEQ------------------------- 1442
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
G+ +A E+G+ F ETSAK+NINI+ AF +A
Sbjct: 1443 ------GQELADEFGIEFFETSAKSNINIDAAFHAIA 1473
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 146/258 (56%), Gaps = 55/258 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
+ ++ YD+L KLLLIGDSGVGK+C+L RFS+D+F ++FI+TIGIDFKIK + + K IKL
Sbjct: 3 LRRQDYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWIKL 62
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT++YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++
Sbjct: 63 QIWDTAGQERFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHASDNVNKVLV 122
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +DE P
Sbjct: 123 GNKCD------------------------------------------MDESKRRVPY--- 137
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY-----DKTSGRDPLEAPD 235
+G+A+A E+G++F ETSAK+NI +++ F +A + +T
Sbjct: 138 -----SQGQALADEFGIQFFETSAKSNIKVDEVFQSIAKDVMLRLRDSQTDSPSAGSGSG 192
Query: 236 RVTIDKKPDRGGMAGGCC 253
V + + GCC
Sbjct: 193 NVHLSSTTASAKQSKGCC 210
>gi|325181448|emb|CCA15868.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2066
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 133/217 (61%), Gaps = 50/217 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1362 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1421
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1422 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1481
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1482 NKCDVDPSER-------------------AVTTEQ------------------------- 1497
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
G+ +A E+G+ F ETSAK+NINI+ AF +A
Sbjct: 1498 ------GQELADEFGIEFFETSAKSNINIDAAFHAIA 1528
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 146/250 (58%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
A G+ F+ETSAK+ N+E+AF+ +A I + A ++ V I KP
Sbjct: 140 ------ADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAAEKSNVKIQSKP 193
Query: 244 DRGGMAGGCC 253
+GGCC
Sbjct: 194 VNTS-SGGCC 202
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F
Sbjct: 125 LTAKK------------------VVDYQTAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A E G+ F+ETSAK N+E+AF+ +A I ++ + + + + TI P R
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSSAKPTTI---PLR 190
Query: 246 GGM---AGGCC 253
G + CC
Sbjct: 191 GQVLQHKPNCC 201
>gi|325181453|emb|CCA15878.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2038
Score = 192 bits (489), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 133/217 (61%), Gaps = 50/217 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1334 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1393
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1394 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1453
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1454 NKCDVDPSER-------------------AVTTEQ------------------------- 1469
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
G+ +A E+G+ F ETSAK+NINI+ AF +A
Sbjct: 1470 ------GQELADEFGIEFFETSAKSNINIDAAFHAIA 1500
>gi|367011395|ref|XP_003680198.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
gi|359747857|emb|CCE90987.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
Length = 215
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 144/260 (55%), Gaps = 69/260 (26%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF DD FN +FI+TIGIDFKIKTVD+ GKK KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVDINGKKTKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN+D + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIRQWFKTVNEHANDDAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D T T +Y
Sbjct: 135 SD------MDTRTVTY-------------------------------------------- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK----------TSGRDPLEA 233
+GE +A+E G+ F+E+SAK + N+ + F LA I +K SGR+
Sbjct: 145 --EQGETLAKELGIPFVESSAKNDDNVNEIFFTLARLIQEKIDNDKLAGGANSGREG--- 199
Query: 234 PDRVTIDKKPDRGGMAGGCC 253
I+ G GCC
Sbjct: 200 ----NININSGSGSTKSGCC 215
>gi|325181451|emb|CCA15876.1| Chloride Channel (ClC) Family putative [Albugo laibachii Nc14]
Length = 2063
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 133/217 (61%), Gaps = 50/217 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD L KLLLIGDSGVGK+CVL R+SDD+F T+FI+TIGIDFK+KT+D+ GK++KLQ
Sbjct: 1359 SSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVNGKRVKLQ 1418
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI++VYD+T++ SF NI W+ I ++A+ +V K+++G
Sbjct: 1419 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRNWMTQIKQNASTNVNKILIG 1478
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ER +T E+
Sbjct: 1479 NKCDVDPSER-------------------AVTTEQ------------------------- 1494
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
G+ +A E+G+ F ETSAK+NINI+ AF +A
Sbjct: 1495 ------GQELADEFGIEFFETSAKSNINIDAAFHAIA 1525
>gi|412989196|emb|CCO15787.1| predicted protein [Bathycoccus prasinos]
Length = 211
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 144/255 (56%), Gaps = 53/255 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ K +D L KLLLIGDSGVGK+C+L R+SDD F T+FI+TIGIDFKIKT+DL KK+K+Q
Sbjct: 7 SNKPFDVLVKLLLIGDSGVGKSCLLLRYSDDKFTTSFITTIGIDFKIKTIDLDQKKVKMQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TIT +YYRGA G++LVYD+T+E SF+N+ W+RNI+ HA+E + ++G
Sbjct: 67 IWDTAGQERFRTITAAYYRGAHGVLLVYDVTDETSFENVRNWMRNIEAHASEAAKVCLIG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +R
Sbjct: 127 NKCDCEDSKR-------------------------------------------------- 136
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY--DKTSGRDPLEAPDRVTI 239
V K RG A+A+E+GV F ETSAK+ + +E+AF +A KT+ + + T+
Sbjct: 137 KVTKERGVALAKEFGVPFFETSAKSGLRVEEAFSSMARRCVGESKTNNNNSNNSGGGGTV 196
Query: 240 D-KKPDRGGMAGGCC 253
++ +GG CC
Sbjct: 197 RLRETAKGGSKSSCC 211
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 145/252 (57%), Gaps = 53/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K +D KLLL+GDSGVGK+C+L RF DD FN +FI+TIGIDFKIKT+D+ GK+IKLQ+W
Sbjct: 7 KAFDRTMKLLLVGDSGVGKSCLLLRFVDDKFNPSFITTIGIDFKIKTIDINGKRIKLQVW 66
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI++VYD+ +E SF+++ KW + +++HA +D + ++G
Sbjct: 67 DTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKKWYQTVNQHAKDDAQLFLVGNK 126
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D DE + + V
Sbjct: 127 CD-------------------------------------------DEESRQ--------V 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL-EAPDRVTID-K 241
+GE +A+E G+ FME SAK+++N+ + F +LA I +KTS + E + +D +
Sbjct: 136 STKQGELLAQELGIPFMEASAKSSVNVSEVFYKLAGLILEKTSDEEAASEQSQKGNVDVR 195
Query: 242 KPDRGGMAGGCC 253
+ GCC
Sbjct: 196 QAGHTVSXSGCC 207
>gi|255645965|gb|ACU23471.1| unknown [Glycine max]
Length = 169
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 132/204 (64%), Gaps = 50/204 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++ GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+E +VV +
Sbjct: 132 ----------------------------------------------MDESKRVVPT---- 141
Query: 186 HRGEAIAREYGVRFMETSAKANIN 209
+G+A+A EYG++F ETSAK ++N
Sbjct: 142 SKGQALADEYGIKFFETSAKTDLN 165
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/229 (43%), Positives = 138/229 (60%), Gaps = 51/229 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +ANE+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYANENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F
Sbjct: 125 LTAKK------------------VVDYQTAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
A E G+ F+ETSAK N+E+AF+ +A I ++ + + + P
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVINKP 182
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 142/249 (57%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 128 LTTKK------------------VVDFTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD-PLEAPDRVTIDKKPD 244
A GV F+ETSAK N+E+AF+ +A I ++ P A V I+
Sbjct: 143 ------AESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPAPQGAGSNVKINSSTP 196
Query: 245 RGGMAGGCC 253
GGCC
Sbjct: 197 VKQGGGGCC 205
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 146/250 (58%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF T+T+SYYRGA GI++VYD+T++ SF N+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQWLSEIDRYASDNVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K D +
Sbjct: 123 ------------------------CDLTSKKQVD-------------------------R 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVT--IDKKP 243
E A+ + F+ETSAK + N+E+AF+ +A I ++ + + P+ + + I P
Sbjct: 134 STAEEFAKSLNIPFLETSAKISTNVEQAFMTMAAEIKNRLASQ-PITTQQQPSLGITPAP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 SKPQSNGGCC 202
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKVWLQEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 125 LTTKK------------------VVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + + F+E SAK N+E+AF+ +A I + P A +V ID P +
Sbjct: 140 ------ADQSSMPFLEASAKNATNVEQAFMTMAAEIKNTVGPPAPSGASGQVKIDSTPVQ 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 SKSGSGCC 201
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 145/253 (57%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GIM+VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 128 LTTKK------------------VVDYTTAKEF--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTID 240
A G+ F+ETSAK N+E+AF+ +A I + TSG V I
Sbjct: 143 ------ADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSE---KSNVNIQ 193
Query: 241 KKPDRGGMAGGCC 253
P + +GGCC
Sbjct: 194 STPVKSS-SGGCC 205
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 145/250 (58%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTRK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
A G+ F+ETSAK+ N+E+AF+ +A I + A ++ V I KP
Sbjct: 140 ------ADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAAEKSNVKIQSKP 193
Query: 244 DRGGMAGGCC 253
GGCC
Sbjct: 194 VNPS-PGGCC 202
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 144/253 (56%), Gaps = 58/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +ANE+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D K+F
Sbjct: 125 LTAKR------------------AVDYETAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL-EAPDRVTIDKKPD 244
A E G+ F+ETSAK N+E+AF+ +A I + + + L + P T+ +P
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEQAFMTMAAEIKTRMASQPALNQGPKGATV--RPG 191
Query: 245 RGGMAG----GCC 253
G G CC
Sbjct: 192 EGRPVGKANSQCC 204
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 147/253 (58%), Gaps = 58/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 69
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ W++ ID++A E+V K+++G D
Sbjct: 70 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKSD 129
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ ++ YD
Sbjct: 130 LTSKK----------------VVTYD---------------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-----SGRDPLEAPDRVTID 240
G+ +A + G+ F+ETSAK + N+E+AFIE++ I + R P R+
Sbjct: 140 -EGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTPQPSRSGAGGPARLR-P 197
Query: 241 KKPDRGGMAGGCC 253
+P G + GCC
Sbjct: 198 GQPAHGNQS-GCC 209
>gi|241958088|ref|XP_002421763.1| Ras-related protein Sec4; small GTPase of Rab family, putative
[Candida dubliniensis CD36]
gi|223645108|emb|CAX39704.1| Ras-related protein Sec4 [Candida dubliniensis CD36]
Length = 210
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGK+IKLQ
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE VN
Sbjct: 127 NKCD-------------------------------------------DE--------VNR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD---PLEAPDRVT 238
V K +G+ +A + V F+E SAK+N N++ F ELA+ I +K + A
Sbjct: 136 QVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHVEENIGGVGGAGGAGG 195
Query: 239 IDKKPDRGGMAGGCC 253
ID + G CC
Sbjct: 196 IDVSQNNSGAKNNCC 210
>gi|68475230|ref|XP_718333.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68475429|ref|XP_718237.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|353678099|sp|P0CY31.1|SEC4_CANAL RecName: Full=Ras-related protein SEC4
gi|353678100|sp|C4YL11.1|SEC4_CANAW RecName: Full=Ras-related protein SEC4
gi|353678101|sp|P0CY30.1|SEC4_CANAX RecName: Full=Ras-related protein SEC4
gi|2345152|gb|AAB67974.1| small GTP-binding protein SEC4p [Candida albicans]
gi|2642182|gb|AAC50022.1| Sec4p [Candida albicans]
gi|3859676|emb|CAA22013.1| ras-related protein sec4p [Candida albicans]
gi|46439996|gb|EAK99307.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46440096|gb|EAK99406.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238879654|gb|EEQ43292.1| GTP-binding protein SAS1 [Candida albicans WO-1]
Length = 210
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGK+IKLQ
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE VN
Sbjct: 127 NKCD-------------------------------------------DE--------VNR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD---PLEAPDRVT 238
V K +G+ +A + V F+E SAK+N N++ F ELA+ I +K + A
Sbjct: 136 QVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHVEENIGGVGGASGAGG 195
Query: 239 IDKKPDRGGMAGGCC 253
ID + G CC
Sbjct: 196 IDVSQNNSGAKNNCC 210
>gi|348688677|gb|EGZ28491.1| hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae]
Length = 202
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/248 (41%), Positives = 141/248 (56%), Gaps = 53/248 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D KLL+IGDSGVGKTC+L R+++D+F+ TFI+TIGIDFKIK ++L KK+KLQIWDT
Sbjct: 8 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITTSY+RGA GI+LVYD+T+ SF +I W+ I +HA+ V K+++G
Sbjct: 68 AGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNK-- 125
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K V
Sbjct: 126 ------------------------CDMTDDKV-------------------------VST 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+A+A EYGV+F ETSAK NIN+E FIE+A + ++ D V ++ KP
Sbjct: 137 EEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKNRLMEEGGPHKKDSVNLNAKP-- 194
Query: 246 GGMAGGCC 253
+ GCC
Sbjct: 195 APVKKGCC 202
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 125 LTTKK------------------VVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + + F+E SAK N+E+AF+ +A I ++ P +V ID P
Sbjct: 140 ------ADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPSGQVKIDSTPVS 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 SKSGTGCC 201
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQWLSEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ YD E
Sbjct: 125 LTANR----------------VVSYDTAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + G+ FMETSAK N+E AF+ ++ AI ++ + + T+ +
Sbjct: 139 -----FADQIGIPFMETSAKDATNVEDAFMAMSAAIKNRMASQPSANNAKPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
G GCC
Sbjct: 194 VGQKSGCC 201
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKL LIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ YD E
Sbjct: 125 LTANR----------------AVSYDTAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + G+ FMETSAK N+E AF+ +A AI D+ + + T+ +
Sbjct: 139 -----FADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
G GCC
Sbjct: 194 VGQKSGCC 201
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 137/221 (61%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +VV +
Sbjct: 135 SDM------------------------------------------------DTRVVTA-- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 145 --DQGEALAKELGIPFIESSAKNDNNVNEIFFTLAKLIQEK 183
>gi|357111244|ref|XP_003557424.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 217
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/255 (43%), Positives = 147/255 (57%), Gaps = 58/255 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFK++TV+L G+++KLQIWDT
Sbjct: 12 YDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGRRVKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKVD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T
Sbjct: 132 MDAKRVVST--------------------------------------------------- 140
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-TSGRDPLEAPDRVTIDKK-P 243
+G+ +A EYG++F ETSAK N N+E+ F +A I + T P + I ++ P
Sbjct: 141 AQGQKLADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLTETVAAANEPPTIQISRQEP 200
Query: 244 DRGGMAG-----GCC 253
DR G A CC
Sbjct: 201 DRAGGAASRWSSSCC 215
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 146/254 (57%), Gaps = 53/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ YD+LFKLLLIGDS VGK+C+L RF+DDA+ T+ISTIG+DFKI+TV+L GK +KL
Sbjct: 1 MSASEYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +A++ V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQWLSEIDRYASDSVCKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VV+
Sbjct: 121 GNKCDLV-----------------------------------------------DSKVVD 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ +A A G+ F+ETSAK +IN+E AF+ +++ I +K + + E V +
Sbjct: 134 T----EEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKNKMASQPAAERKSTVHVH 189
Query: 241 KK--PDRGGMAGGC 252
K P + + C
Sbjct: 190 MKGQPIQQQQSSCC 203
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV+ K
Sbjct: 125 LT-----------------------------------------------DKKVVSYETAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A A E G+ FMETSAK +N+E+AF+ ++ +I D+ + + T+ +
Sbjct: 138 ----AFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VEQKASCC 201
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 145/249 (58%), Gaps = 56/249 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+D++F+ T+ISTIG+DFKI+T+DL GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF N+ WL+ I+ +AN V ++++G D
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYANSTVNRLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
T+ D N
Sbjct: 125 LPKSRAVDTV---------------DAMN------------------------------- 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
A+E+ + F+ETSAK IN+E AF+E+A I T+ P+++ P VT++
Sbjct: 139 -----FAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTA---PMQSMPSNVTVNSTQP 190
Query: 245 RGGMAGGCC 253
+GGCC
Sbjct: 191 VTK-SGGCC 198
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 142/249 (57%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A N V
Sbjct: 125 LAE---------------------------------------------------NRVVSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTIDKKPD 244
G+A+A + G+ F+ETSAK N+EKAF+ +A I ++ + + R T+ +
Sbjct: 134 EAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAASGASRPATVQMRGQ 193
Query: 245 RGGMAGGCC 253
CC
Sbjct: 194 PVSQQSSCC 202
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKSA-SGGCC 201
>gi|410077757|ref|XP_003956460.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
gi|372463044|emb|CCF57325.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
Length = 210
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 134/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF +D F+ +FI+TIGIDFKIKTV++ GKKIKLQ+W
Sbjct: 11 KNYDSIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVEINGKKIKLQLW 70
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+EK+F NI KW + + EHAN+D + +++G
Sbjct: 71 DTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANINKWFKTVTEHANDDAQLLLVGNK 130
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +VV+
Sbjct: 131 NDM------------------------------------------------DTRVVSC-- 140
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GE +A+E G+ F+E+SAK N N+ F+ LA I DK
Sbjct: 141 --EQGEVLAKELGLPFVESSAKDNNNVSDIFLSLAKLIQDK 179
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 138/248 (55%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 69
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ WL I+ +A E+V K+++G D
Sbjct: 70 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKTWLEEIERYACENVNKLLVGNKCD 129
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T T Y +GI
Sbjct: 130 LQTKKVVDTTTAMEYANQLGI--------------------------------------- 150
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKKPD 244
F+ETSAK N+E+AF+ +A I ++ EAP V IDK
Sbjct: 151 ------------PFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAAEAPSAVKIDKSRS 198
Query: 245 RGGMAGGC 252
+G C
Sbjct: 199 VESKSGCC 206
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 148/251 (58%), Gaps = 56/251 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T+++ GK+IKLQ+W
Sbjct: 8 RAYDSILKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIEIDGKRIKLQVW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGA GI+LVYD+T+E++F+N+ W + + +HANED + +++G
Sbjct: 68 DTAGQERFRTITTAYYRGATGIILVYDVTDERTFENVRNWFQTVHQHANEDTQLILVGNK 127
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D + V+S
Sbjct: 128 ND-----------------------------------------------EKDLRAVSS-- 138
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD-RVTIDKK 242
RGE++A+E G+ F+E SAK N N+++ F +LA I + + L + + + ++ +
Sbjct: 139 --ERGESLAQELGIPFLEASAKTNDNVDELFFKLAKIIQENNKSNENLNSNNGGINVNSR 196
Query: 243 PDRGGMAGGCC 253
+ + GCC
Sbjct: 197 TE----SKGCC 203
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + MGI
Sbjct: 125 LTANKVVATETAKAFADEMGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK IN+E+AF+ +A +I D+ + + T+ +
Sbjct: 146 ------------PFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VNQKTSCC 201
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/249 (42%), Positives = 144/249 (57%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T K V
Sbjct: 123 ------------------------CDLTENKV-------------------------VSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+A A E G+ FMETSAK N+E+AF+ +A I ++ + + A P V I +P
Sbjct: 134 ETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 193 -VNQKSGCC 200
>gi|301070251|gb|ADK55544.1| RAB10, member RAS oncogene family [Zonotrichia albicollis]
Length = 157
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 126/212 (59%), Gaps = 57/212 (26%)
Query: 44 IDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKW 103
IDFKIKTV+L+GKKIKLQIWDTAGQERFHTITTSYYRGAMGI+LVYDITN KSF+NI KW
Sbjct: 1 IDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISKW 60
Query: 104 LRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILK 163
LRNIDEHANEDVE+M+LG D
Sbjct: 61 LRNIDEHANEDVERMLLGNKCDM------------------------------------- 83
Query: 164 WLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD 223
ED +VV K +GE IARE+G+RF ETSAKANINIEKAF+ LA I
Sbjct: 84 ----------EDKRVVP----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 129
Query: 224 KTSGRDPLEAPDRVTIDKKPDRG--GMAGGCC 253
KT P++ P+ +D G G CC
Sbjct: 130 KT----PVKEPNSENVDISSGSGVTGWKSKCC 157
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 191 bits (485), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A AI D+ + + + T+ +
Sbjct: 146 ------------PFMETSAKDATNVEQAFMAMAAAIKDRMASQPAMNNAKPSTVQLRGQP 193
Query: 246 GGMAGGCC 253
GGCC
Sbjct: 194 VEQKGGCC 201
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF T+T+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKSA-SGGCC 201
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 140/251 (55%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y +LFKLLLIGDSGVGK+C+L RF+DD ++ +FISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +FDN+ +WL+ ID A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQWLQEIDRFACESVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D KSF + L
Sbjct: 125 LVAKK------------------VVDTNTAKSFADTL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+ F+ETSAK + N+E+AF+ +AT I ++ + P AP P
Sbjct: 144 ----------GIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQP--APTTGGAKVVPGS 191
Query: 246 GG---MAGGCC 253
GCC
Sbjct: 192 SAPIQTKSGCC 202
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 149/253 (58%), Gaps = 59/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K VV V K
Sbjct: 124 -------------------------DLTSKK---------------------VVEYSVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD-PLEAPDRVTIDKKPD 244
A A E G+ F+ETSAK N+E+AF+ +A I ++ + + P +A V +P
Sbjct: 138 ----AFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVV---RPQ 190
Query: 245 RG----GMAGGCC 253
G + CC
Sbjct: 191 EGKPINSKSSSCC 203
>gi|354544807|emb|CCE41532.1| hypothetical protein CPAR2_800840 [Candida parapsilosis]
Length = 209
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 140/254 (55%), Gaps = 53/254 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ K YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGKKIKLQ
Sbjct: 7 SSKAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+++YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVIIYDVTDSRSFENVENWFQTVSQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D D++ N
Sbjct: 127 NKCD---------------------------------DDV------------------NR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD--PLEAPDRVTI 239
V K +GE +A + V F+E SAK+N N++ F ELA I +K D I
Sbjct: 136 QVSKEQGEELASKLHVPFLEASAKSNENVDAIFYELAGIIQEKHVNDDAGAASGGGASGI 195
Query: 240 DKKPDRGGMAGGCC 253
D G+ CC
Sbjct: 196 DVSQGNSGVKNNCC 209
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNKPTVQVTGGQGVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|390342453|ref|XP_796218.3| PREDICTED: ras-related protein Rab-8A-like [Strongylocentrotus
purpuratus]
Length = 205
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 128/186 (68%), Gaps = 10/186 (5%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL+K+++IGD GVGKTCV+FRFS+D F+TTF+S IGIDFKIK ++L GKKIKLQIW
Sbjct: 3 RAYDFLYKIVVIGDPGVGKTCVIFRFSEDVFHTTFLSVIGIDFKIKMIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT YYRGA+GIM++YDITN+ SF N+ KW+R +EH + D EKMILG
Sbjct: 63 DTAGQERFKTITTGYYRGALGIMVLYDITNQNSFVNMRKWIRESEEHGSADAEKMILGNK 122
Query: 124 KD-----TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWL-----RNIDEHAN 173
D QE+ + + + +I E++F +++ + RN+D
Sbjct: 123 CDMDETRAVSQEKGEQLAKDFGIKFLETSAKANINIEQAFMTLVRDIKSKMDRNMDAKGQ 182
Query: 174 EDPQVV 179
+ P+V+
Sbjct: 183 QKPEVI 188
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 85/131 (64%), Gaps = 13/131 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT YYRGA+GIM++YDITN+ SF N+ KW+R +EH + D + +
Sbjct: 63 DTAGQERFKTITTGYYRGALGIMVLYDITNQNSFVNMRKWIRESEEHGSADAEKMILGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI---YDKTSGRDPL 231
V + +GE +A+++G++F+ETSAKANINIE+AF+ L I D+
Sbjct: 123 CDMDETRAVSQEKGEQLAKDFGIKFLETSAKANINIEQAFMTLVRDIKSKMDRNMDAKGQ 182
Query: 232 EAPDRVTIDKK 242
+ P+ + + KK
Sbjct: 183 QKPEVIKVTKK 193
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 145/250 (58%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ W++ ID++A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKHWVQEIDKYATENVSKLLVGNKTD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ ++ YD
Sbjct: 125 LTSKK----------------VVTYD---------------------------------- 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD--KTSGRDPLEAPDRVTIDKKP 243
G+ +A + GV F+ETSAK + N+E+AFIE+++ I KT+ + +
Sbjct: 135 -EGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRVKTAPQPNRSGAGAARLRPGQ 193
Query: 244 DRGGMAGGCC 253
G GCC
Sbjct: 194 PAHGNQSGCC 203
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/258 (41%), Positives = 148/258 (57%), Gaps = 59/258 (22%)
Query: 1 MAKKT-YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIK 59
MA ++ YDFLFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L GK IK
Sbjct: 1 MAHQSEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIK 60
Query: 60 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMI 119
LQIWDTAGQERF TIT+SYYRGA GI++V+D+T+++SF+N+ +WL ID +ANE+V K++
Sbjct: 61 LQIWDTAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQWLNEIDRYANENVNKLL 120
Query: 120 LGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV 179
+G D + V D K+F
Sbjct: 121 VGNKTDLTSKR------------------VVDFNTAKAF--------------------- 141
Query: 180 NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
A E G+ F+ETSAK N+E+AF+ +A I ++ + R+P TI
Sbjct: 142 ------------ADEIGIPFIETSAKNASNVEQAFMTMAAEIKNRMA-REPAVNKSANTI 188
Query: 240 DKKPDRG----GMAGGCC 253
+P G CC
Sbjct: 189 --RPGEGKSIATQKSSCC 204
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKPA-SGGCC 201
>gi|444319260|ref|XP_004180287.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
gi|387513329|emb|CCH60768.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
Length = 217
Score = 191 bits (484), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 134/231 (58%), Gaps = 52/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF DD FN +FI+TIGIDFKIKT+D+ GKKIKLQ+W
Sbjct: 15 KNYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTIDINGKKIKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E +F+NI W + ++EHAN + + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDENTFENIRTWFKTVNEHANGEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D T T +Y
Sbjct: 135 SD------METRTVTY-------------------------------------------- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+GE++A+E G+ F+E+SAK + N+ + F L I +K E P
Sbjct: 145 --EQGESLAKELGIPFIESSAKDDKNVNEIFFTLTNLIQEKIDSNKMTETP 193
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 144/251 (57%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DDA+ ++ISTIG+DFKI+T++ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T +SF+N+ +WL ID +ANE V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +VV++
Sbjct: 125 MV-----------------------------------------------ESKVVST---- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR---DPLEAPDRVTIDKK 242
G A+A E G+ F+ETSAK +IN+E+AF+ +A I K + + P V + +
Sbjct: 134 ETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQ 193
Query: 243 PDRGGMAGGCC 253
P + GGCC
Sbjct: 194 PIQQN-NGGCC 203
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 144/251 (57%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQWLQEIDRYACENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A +++ T + ++GI
Sbjct: 125 LAAKKQVDYTTAKEFADSIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVTIDKK 242
F+ETSAK N+E+AF+ +A I ++ T + D + I K
Sbjct: 146 ------------PFLETSAKNATNVEQAFMTMAAEIKNRMGPTMASGGAKKKDTLDIKAK 193
Query: 243 PDRGGMAGGCC 253
P +GGCC
Sbjct: 194 P--ASSSGGCC 202
>gi|217071576|gb|ACJ84148.1| unknown [Medicago truncatula]
Length = 163
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 111/130 (85%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQER 131
D +R
Sbjct: 128 NKADMDESKR 137
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 11/92 (11%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++ +
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNK 129
Query: 180 ------NSWVCKHRGEAIAREYGVRFMETSAK 205
V +G+A+A EY F + K
Sbjct: 130 ADMDESKRAVPTSKGQALADEYASNFSKLVQK 161
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 143/249 (57%), Gaps = 53/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 128 LTTKK------------------VVDYTTAKEF--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKKPD 244
A + + F+ETSAK N+E+AF+ +A I ++ G E V I P
Sbjct: 143 ------ADQLHIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGAVTNETKQNVKIQSTPV 196
Query: 245 RGGMAGGCC 253
+ GGCC
Sbjct: 197 KQS-GGGCC 204
>gi|62089120|dbj|BAD93004.1| mel transforming oncogene variant [Homo sapiens]
Length = 152
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 89/103 (86%), Positives = 99/103 (96%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDE 109
GQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+E
Sbjct: 61 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE 103
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 43/46 (93%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDE 170
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+E
Sbjct: 58 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEE 103
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 137/231 (59%), Gaps = 51/231 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + T+ISTIG+DFKI+TV+L+GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+ + WL ID +ANE+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKGWLNEIDRYANENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ V D K+F
Sbjct: 125 LTSQK------------------VVDYATAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR 236
A E G+ F+ETSAK N+E+AF+ +A I ++ + + + A R
Sbjct: 140 ------ADEIGIPFIETSAKNATNVEQAFMTMANEIKNRMASQPQMNAGPR 184
>gi|194373731|dbj|BAG56961.1| unnamed protein product [Homo sapiens]
Length = 292
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 139/229 (60%), Gaps = 51/229 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + +D++FK+L+IG+S VGKT LFR++DD+F F+ST+GIDFK+KT+ K+IKLQ
Sbjct: 15 SDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQ 74
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQER+ TITT+YYRGAMG +L+YDITNE+SF+ + W I ++ ++ + +++G
Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVG 134
Query: 122 ---------------------------------------------------KTKDTAGQE 130
+ DTAGQE
Sbjct: 135 NKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTIYRNDKRIKLQIWDTAGQE 194
Query: 131 RFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV 179
R+ TITT+YYRGAMG +L+YDITNE+SF+ + W I ++ ++ QV+
Sbjct: 195 RYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVL 243
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 57/77 (74%)
Query: 49 KTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNID 108
+T+ K+IKLQIWDTAGQER+ TITT+YYRGAMG +L+YDITNE+SF+ + W I
Sbjct: 174 QTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIK 233
Query: 109 EHANEDVEKMILGKTKD 125
++ ++ + +++G D
Sbjct: 234 TYSWDNAQVLLVGNKCD 250
>gi|108711785|gb|ABF99580.1| Ras-related protein ARA-3, putative, expressed [Oryza sativa
Japonica Group]
Length = 176
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 133/211 (63%), Gaps = 51/211 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPT-------- 141
Query: 186 HRGEAIAREYGVRFMET-SAKANINIEKAFI 215
+G+A+A EYG++F ET SAK+ + +FI
Sbjct: 142 SKGQALADEYGIKFFETVSAKSQLLFWYSFI 172
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 146/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + +FISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S++N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD--KTSGRDPLEAPDRVTIDKKP 243
G+ F+ETSAK N+E+AF+ +A I + E PD + I+ P
Sbjct: 144 ----------GIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGGSEKPD-LKIESTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VQQS-GGGCC 201
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 144/251 (57%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV+ V K
Sbjct: 125 MA-----------------------------------------------DKKVVDYQVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ G + ++ P +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERM-GSSIATNNTKANVNVSPGQ 192
Query: 246 G---GMAGGCC 253
G +GGCC
Sbjct: 193 GVSNNQSGGCC 203
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 145/253 (57%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 128 LTTKK------------------VVDYTTAKEF--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTID 240
A G+ F+ETSAK N+E+AF+ +A I + TSG V I
Sbjct: 143 ------ADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSE---KSNVNIQ 193
Query: 241 KKPDRGGMAGGCC 253
P + +GGCC
Sbjct: 194 STPVKSS-SGGCC 205
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 148/255 (58%), Gaps = 54/255 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA + +D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKL
Sbjct: 1 MAAQQHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ++ V D T K F + L
Sbjct: 121 GNKCDLTTKK------------------VVDYTTAKEFADSL------------------ 144
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VT 238
G+ F+ETSAK N+E++F+ +A I + ++ V
Sbjct: 145 ---------------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVK 189
Query: 239 IDKKPDRGGMAGGCC 253
I P + +GGCC
Sbjct: 190 IQSTPVKQS-SGGCC 203
>gi|366991981|ref|XP_003675756.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
gi|342301621|emb|CCC69392.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
Length = 210
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 143/253 (56%), Gaps = 56/253 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 11 KGYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 70
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F N+ +W + ++EHAN++ + +++G
Sbjct: 71 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNVKQWFKTVNEHANDEAQLLLVGNK 130
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +VV
Sbjct: 131 SDM------------------------------------------------DTRVVTY-- 140
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR---VTID 240
+GE++A+E G+ F+E+SAK + N+ + F LA I +K + L P I
Sbjct: 141 --EQGESLAKELGLPFIESSAKNDDNVNEIFFTLAKLIQEKID-SNKLAGPGNGKDANIS 197
Query: 241 KKPDRGGMAGGCC 253
GG CC
Sbjct: 198 INAKDGGSKSNCC 210
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 190 bits (483), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGD+GVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 125 LTTKK------------------VVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + + F+E SAK N+E+AF+ +A I ++ P +V ID P
Sbjct: 140 ------ADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPSGQVKIDSTPVS 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 SKSGTGCC 201
>gi|50287271|ref|XP_446065.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701907|sp|O42819.1|SEC4_CANGA RecName: Full=Ras-related protein SEC4
gi|2959746|emb|CAA12071.1| putative SEC4 protein [Candida glabrata]
gi|49525372|emb|CAG58989.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 140/232 (60%), Gaps = 53/232 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +V V
Sbjct: 135 SDM------------------------------------------------DTRV----V 142
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD 235
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K + L P+
Sbjct: 143 TYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKIDS-NKLSGPN 193
>gi|348574253|ref|XP_003472905.1| PREDICTED: ras-related protein Rab-10-like [Cavia porcellus]
Length = 178
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/219 (51%), Positives = 131/219 (59%), Gaps = 58/219 (26%)
Query: 38 FISTIG-IDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKS 96
F+ +IG IDFKIKTV+L+GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KS
Sbjct: 15 FLLSIGRIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKS 74
Query: 97 FDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEK 156
F+NI KWLRNIDEHANEDVE+M+LG D
Sbjct: 75 FENISKWLRNIDEHANEDVERMLLGNKCDM------------------------------ 104
Query: 157 SFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIE 216
+D +VV K +GE IA+E+G+RF ETSAKANINIEKAF+
Sbjct: 105 -----------------DDKRVVP----KGKGEQIAKEHGIRFFETSAKANINIEKAFLT 143
Query: 217 LATAIYDKTSGRDPLEAPDRVTIDKKPDRG--GMAGGCC 253
LA I KT P++ P+ +D G G CC
Sbjct: 144 LAEDILRKT----PVKEPNSENVDISSGGGVTGWKSKCC 178
>gi|384500796|gb|EIE91287.1| GTP-binding protein ypt2 [Rhizopus delemar RA 99-880]
Length = 193
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/238 (43%), Positives = 137/238 (57%), Gaps = 54/238 (22%)
Query: 19 GVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSY 78
GVGK+C+L RFSDD+F +FI+TIGIDFKI+T++L GK+IKLQIWDTAGQERF TITT+Y
Sbjct: 7 GVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAY 66
Query: 79 YRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTS 138
YRGAMGI+LVYD T+E+SF N+ W NI++HA+E V K+++G D
Sbjct: 67 YRGAMGILLVYDTTDERSFGNVRNWFSNIEQHASEGVNKILIGNKCDA------------ 114
Query: 139 YYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVR 198
ED +V++ K +GE +A E G+R
Sbjct: 115 -----------------------------------EDKRVIS----KEQGETLANELGIR 135
Query: 199 FMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVTIDKKPDRGGMAGGCC 253
FMETSAKANI +E+AF +LA I + T + V +D+ GGCC
Sbjct: 136 FMETSAKANIGVEEAFFDLARDIKKRLIDTQQAQQTRQREEVRLDQSTPSKANNGGCC 193
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 146/254 (57%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFK++TV+L GK++KLQIWDT
Sbjct: 12 YDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKVD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T
Sbjct: 132 MDAKRVVST--------------------------------------------------- 140
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-TSGRDPLEAPDRVTIDKK-P 243
+G+ +A EYG++F ETSAK N N+E+ F +A I + T P + I + P
Sbjct: 141 AQGQKLADEYGIKFFETSAKTNQNVEQVFFTMARDIKQRLTETVAAATEPPTIQISRPDP 200
Query: 244 DRGGMA----GGCC 253
D+ G A CC
Sbjct: 201 DQAGTASSRWSSCC 214
>gi|150865512|ref|XP_001384762.2| GTP-binding protein [Scheffersomyces stipitis CBS 6054]
gi|149386768|gb|ABN66733.2| GTP-binding protein [Scheffersomyces stipitis CBS 6054]
Length = 207
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 137/250 (54%), Gaps = 51/250 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
++YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGKKIKLQ+W
Sbjct: 9 RSYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQVW 68
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 69 DTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVDNWFQTVTQHANEDAQIFLVGNK 128
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D DE N V
Sbjct: 129 CD-------------------------------------------DES--------NRQV 137
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K +G+ +A + + F+E SAK+N N++ F ELA I DK
Sbjct: 138 SKEQGQELASKLNIPFLEASAKSNENVDSIFYELAGIIQDKHVDEQTTSGSAGGIDVSSS 197
Query: 244 DRGGMAGGCC 253
+ G+ CC
Sbjct: 198 SKSGIKNNCC 207
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 144/249 (57%), Gaps = 53/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKKPD 244
G+ F+ETSAK N+E+AF+ +A I + G V I P
Sbjct: 147 ----------GIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGQEKNVKIQSTPV 196
Query: 245 RGGMAGGCC 253
+ +GGCC
Sbjct: 197 KQS-SGGCC 204
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 146/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 73 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 132
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G D
Sbjct: 133 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 192
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+TT V D T K F + L
Sbjct: 193 ---------LTTKK---------VVDNTTAKEFADSL----------------------- 211
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 212 ----------GIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 260
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 261 VKPA-GGGCC 269
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 134/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LL+GDSGVGK+C+L RF +D F TFI+TIGIDFKIKTVD+ GK++KLQ+W
Sbjct: 15 KNYDSVMKILLLGDSGVGKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDINGKRVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L+YD+T+E++F+NI +W +++HA+EDV +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQWFSTVNQHASEDVVMLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
KD T T SY
Sbjct: 135 KD------MDTRTVSY-------------------------------------------- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E SAK + N+ + F LA I +K
Sbjct: 145 --EQGEALAKELGIPFIEASAKDDTNVSEIFFTLAKLIQEK 183
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 148/253 (58%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTID 240
G+ F+ETSAK+ N+E+AF+ +A I + T+G + V I
Sbjct: 144 ----------GIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATTGGN---EKSNVKIQ 190
Query: 241 KKPDRGGMAGGCC 253
P + +GGCC
Sbjct: 191 STPVKPA-SGGCC 202
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLL+IGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKPA-SGGCC 201
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 107/250 (42%), Positives = 146/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 68 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 127
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G D
Sbjct: 128 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 187
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+TT V D T K F + L
Sbjct: 188 ---------LTTKK---------VVDNTTAKEFADSL----------------------- 206
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 207 ----------GIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 255
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 256 VKPA-GGGCC 264
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 MA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P +
Sbjct: 138 EFADSL----GIPFLETSAKNANNVEQAFLTMARQIKERMGNTTVNNKPTVQVGQGSNVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/187 (48%), Positives = 129/187 (68%), Gaps = 6/187 (3%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD +N ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ WL ID +ANE V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDRYANESVNKLLVGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI----LKWLRNIDEHANEDPQVVNS 181
++ T T + ++GI + T+ K+ +N+ + + I E PQ +
Sbjct: 125 LTTKKVVDTATAKEFADSLGIKFLE--TSAKTSENVEQAFITMAQEIKERMASQPQTQKT 182
Query: 182 WVCKHRG 188
H G
Sbjct: 183 SSGIHVG 189
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 85/143 (59%), Gaps = 17/143 (11%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ WL ID +ANE VN +
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLHEIDRYANES---VNKLLV 119
Query: 185 KHRGE---------AIAREY----GVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
++ + A A+E+ G++F+ETSAK + N+E+AFI +A I ++ + +
Sbjct: 120 GNKNDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMASQPQT 179
Query: 232 EAPDR-VTIDKKPDRGGMAGGCC 253
+ + + + CC
Sbjct: 180 QKTSSGIHVGANAQEVKESSSCC 202
>gi|448089189|ref|XP_004196738.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|448093406|ref|XP_004197769.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359378160|emb|CCE84419.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359379191|emb|CCE83388.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
Length = 205
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/253 (40%), Positives = 142/253 (56%), Gaps = 58/253 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
++YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGKKIKLQ+W
Sbjct: 8 RSYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQVW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L+YD+T+ ++F+N+ W + +HANED + ++G
Sbjct: 68 DTAGQERFRTITTAYYRGAMGIVLIYDVTDSRTFENVENWFHTVTQHANEDAQIFLVGNK 127
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D DE N V
Sbjct: 128 CD-------------------------------------------DEE--------NRQV 136
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K G+A+A + V F+E SAK+N N++ F ELA+ I +K + A V + +
Sbjct: 137 SKEDGQALASKLNVPFLEASAKSNENVDSIFYELASIIQEKHVNTETNTASSGVDVSQ-- 194
Query: 244 DRGGMA---GGCC 253
GG + CC
Sbjct: 195 --GGASSFKSNCC 205
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 145/253 (57%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++++F+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQWLQEIDRYACESVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
GV F+ETSAK N+E+AF+ +A I ++ P DR +K P +
Sbjct: 144 ----------GVPFLETSAKNATNVEQAFMTMAAEIKNRMG--PPQTTADRS--EKVPLK 189
Query: 246 GG-----MAGGCC 253
G GGCC
Sbjct: 190 SGSPVKPSGGGCC 202
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 152/262 (58%), Gaps = 66/262 (25%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MAAAEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQWLQEIDRYAVEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +TT + + EH
Sbjct: 121 GNKSD---------LTT----------------------------KKVVEH--------- 134
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---------TSGRDPL 231
+ ++ A E G+ F+ETSAK N+E+AF+ ++ I D+ + G+ +
Sbjct: 135 -----NEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSTSMASGSGGKSTI 189
Query: 232 EAPDRVTIDKKPDRGGMAGGCC 253
+ + T+++K AGGCC
Sbjct: 190 KGLGQ-TVEQKT-----AGGCC 205
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 189 bits (481), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 144/253 (56%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTID 240
A G+ F+ETSAK N+E+AF+ +A I + TSG V I
Sbjct: 140 ------ADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSE---KSNVNIQ 190
Query: 241 KKPDRGGMAGGCC 253
P + GGCC
Sbjct: 191 STPVKSS-GGGCC 202
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 142/249 (57%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + + T + +GI
Sbjct: 125 LAANKVVSSETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
FMETSAK N+E+AF+ +A I ++ + + A P V I +P
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPANNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 193 -MNQKSGCC 200
>gi|393218947|gb|EJD04435.1| GTP-binding protein SAS1 [Fomitiporia mediterranea MF3/22]
Length = 204
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 141/253 (55%), Gaps = 51/253 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M +YDFL KLLLIGDSGVGK+C+L RF DD + +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MPPPSYDFLIKLLLIGDSGVGKSCLLTRFCDDTWTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+LVYD+T++KSFDNI W +++HA+ +V+++++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDQKSFDNIDTWFSAVEQHASNEVDRILV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G N W E+ +VV+
Sbjct: 121 G--------------------------------------NKCDW---------EEKRVVS 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
G+ A + G+ F+ETSAK +EKAF LA AI + E P +
Sbjct: 134 Y----DAGKEKADKLGIAFIETSAKEGKEVEKAFFSLAGAIKTRLIDTQTTEEPQQSVQV 189
Query: 241 KKPDRGGMAGGCC 253
G CC
Sbjct: 190 GGETTSNNQGSCC 202
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 146/254 (57%), Gaps = 62/254 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y +LFKLLLIGDSGVGK+C+L RF+DD ++ +FISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ +F+N+ +WL+ ID A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F + L+
Sbjct: 125 LVAKK------------------VVDFNTAKAFADSLQ---------------------- 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+ F+ETSAK + N+E+AF+ +AT I ++ + P + T+DK
Sbjct: 145 -----------IPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQ-----TVDKNKVV 188
Query: 246 GGMAG------GCC 253
G + GCC
Sbjct: 189 PGSSAPISPKSGCC 202
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/235 (43%), Positives = 144/235 (61%), Gaps = 52/235 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ R A S+D
Sbjct: 125 LTSE-----------RAA-------------SYDT------------------------- 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTI 239
+A A E G+ FMETSAK + N+E+AF+ +A++I D+ + + A P V I
Sbjct: 136 --AKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRMASQPTNNAKPPTVQI 188
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis UAMH
10762]
Length = 201
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 141/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 MA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G++F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 138 EFADSL----GIQFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKPTVQVGQGQGVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYAVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKPTVQVGQGSNVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|301117946|ref|XP_002906701.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108050|gb|EEY66102.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/248 (41%), Positives = 140/248 (56%), Gaps = 53/248 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D KLL+IGDSGVGKTC+L R+++D+F+ TFI+TIGIDFKIK ++L KK+KLQIWDT
Sbjct: 8 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDNKKVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITTSY+RGA GI+LVYD+T+ SF +I W+ I +HA+ V K+++G
Sbjct: 68 AGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNK-- 125
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K V
Sbjct: 126 ------------------------CDMTDDKV-------------------------VST 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+A+A EYGV+F ETSAK NIN+E FIE+A + ++ D V ++ KP
Sbjct: 137 EEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKNRLMEEGGPHKKDSVNLNAKP-- 194
Query: 246 GGMAGGCC 253
+ CC
Sbjct: 195 APVKKSCC 202
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 140/250 (56%), Gaps = 51/250 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ +D+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIW
Sbjct: 7 QIFDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 66
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G
Sbjct: 67 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNK 126
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + T T + MGI
Sbjct: 127 SDLTANKVVATETAKAFADEMGI------------------------------------- 149
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
FMETSAK IN+E+AF+ +A +I D+ + + T+ +
Sbjct: 150 --------------PFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANARPATVQIRG 195
Query: 244 DRGGMAGGCC 253
CC
Sbjct: 196 QPVNQKTSCC 205
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 86/122 (70%), Positives = 109/122 (89%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TV+++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KD 125
D
Sbjct: 123 CD 124
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ--VVNSW 182
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ + ++ +
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
+ARE+G+RF ETSAK+++N+++AF LA I K+S R
Sbjct: 123 CDMEVKRKLAREHGIRFFETSAKSSLNVDEAFSSLARDILLKSSRR 168
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 146/249 (58%), Gaps = 53/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTIDKKPD 244
G+ F+ETSAK N+E+AF+ +A I + G + + I+ P
Sbjct: 144 ----------GIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGSEKTMKIESTPV 193
Query: 245 RGGMAGGCC 253
+ +GGCC
Sbjct: 194 KPA-SGGCC 201
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 147/251 (58%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKS- 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K D+ + E+AN
Sbjct: 127 -------------------------DLTTKKVVDHTIA-----AEYAN------------ 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD---RVTIDKK 242
+ G+ F+ETSAK+ N+E+AF+ +A I ++ P A D +V ID+
Sbjct: 145 --------QLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG--PPSSATDNASKVKIDQG 194
Query: 243 PDRGGMAGGCC 253
GCC
Sbjct: 195 RPVENNRSGCC 205
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 137/221 (61%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + +VV +
Sbjct: 135 SDM------------------------------------------------ETRVVTA-- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 145 --DQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKPTVQVGQGSNVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 144/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKQA-GGGCC 201
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 140/249 (56%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGV K+C+L RFSDD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLLKLLLIGDSGVRKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
N V
Sbjct: 125 LEA---------------------------------------------------NRAVSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
+A A G+ FMETSAK N+E+AF+ + +I D+ + + A P V I +P
Sbjct: 134 EAAKAFADGIGIPFMETSAKGATNVEQAFMAMTASIKDRMASQPANNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GGCC
Sbjct: 193 -VAQKGGCC 200
>gi|357440495|ref|XP_003590525.1| Ras-like protein [Medicago truncatula]
gi|355479573|gb|AES60776.1| Ras-like protein [Medicago truncatula]
Length = 197
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 85/130 (65%), Positives = 111/130 (85%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQER 131
D +R
Sbjct: 128 NKADMDESKR 137
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 47/51 (92%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
DTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDN 120
>gi|119573630|gb|EAW53245.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573631|gb|EAW53246.1| hCG1996054, isoform CRA_d [Homo sapiens]
gi|119573632|gb|EAW53247.1| hCG1996054, isoform CRA_d [Homo sapiens]
Length = 166
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/145 (61%), Positives = 114/145 (78%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIML 148
D + + R + +L
Sbjct: 123 CDMEAKRKVQKEQADKVRARLSNVL 147
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 45/49 (91%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHAN 173
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS 111
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 144/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKPA-GGGCC 201
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 143/256 (55%), Gaps = 54/256 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MSAPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ ++ N+ +WL+ ID +A E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDRYAVEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A + + E+A
Sbjct: 121 GNKSDLA-------------------------------------TKKVVEYA-------- 135
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+A A E G+ F+ETSAK N+E+AF+ ++ I D+ P +
Sbjct: 136 ------EAKAFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTMASGPGAKSTI 189
Query: 241 KKPDRG---GMAGGCC 253
K + AGGCC
Sbjct: 190 KGLGQNVEQKTAGGCC 205
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 137/221 (61%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + +VV +
Sbjct: 135 SDM------------------------------------------------ETRVVTA-- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 145 --DQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor of
RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 137/221 (61%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + +VV +
Sbjct: 135 SDM------------------------------------------------ETRVVTA-- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 145 --DQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 142/249 (57%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + + T + +GI
Sbjct: 125 LADNKVVSSETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
FMETSAK N+E+AF+ +A I ++ + + A P V I +P
Sbjct: 146 ------------PFMETSAKNANNVEQAFMAMAAEIKNRMASQPSNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 193 -VNQKSGCC 200
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 137/223 (61%), Gaps = 51/223 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
G++ V D K+F
Sbjct: 125 LTGKK------------------VVDYQAAKAF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
A E G+ F+ETSAK N+E+AF+ +A I ++ + +
Sbjct: 140 ------ADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQ 176
>gi|448508435|ref|XP_003865923.1| Sec4 GTPase [Candida orthopsilosis Co 90-125]
gi|380350261|emb|CCG20482.1| Sec4 GTPase [Candida orthopsilosis Co 90-125]
Length = 209
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 139/254 (54%), Gaps = 53/254 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ K YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGKKIKLQ
Sbjct: 7 SSKAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+++YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVIIYDVTDSRSFENVENWFQTVSQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D D++ N
Sbjct: 127 NKCD---------------------------------DDV------------------NR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTI 239
V K +GE +A + V F+E SAK+N N++ F ELA I +K +
Sbjct: 136 QVSKEQGEELASKLHVPFLEASAKSNENVDAIFYELAGIIQEKHVNDNAGAATGGGAGGV 195
Query: 240 DKKPDRGGMAGGCC 253
D G+ CC
Sbjct: 196 DVSQGNSGVKNNCC 209
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 146/253 (57%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K + + L
Sbjct: 128 LTTKK------------------VVDYTTAKEYADQL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-----PDRVTID 240
G+ F+ETSAK N+E+AF+ +A I ++ P+ A P
Sbjct: 147 ----------GIPFLETSAKNATNVEQAFMTMAAEIKNRMG---PVTAASENKPSVKINS 193
Query: 241 KKPDRGGMAGGCC 253
P + G GGCC
Sbjct: 194 STPVKQG-GGGCC 205
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV+ K
Sbjct: 125 LT-----------------------------------------------DKRVVSYETAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A A E G+ FMETSAK +N+E+AF+ ++ +I D+ + + T+ +
Sbjct: 138 ----AFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VEQKTSCC 201
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 143/256 (55%), Gaps = 54/256 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MSAPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ ++ N+ +WL+ ID +A E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQWLQEIDRYAVEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D A ++ V + KSF
Sbjct: 121 GNKSDLATKK------------------VVEYAEAKSF---------------------- 140
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
A E G+ F+ETSAK N+E+AF+ ++ I D+ P +
Sbjct: 141 -----------ADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTMASGPGAKSTI 189
Query: 241 KKPDRG---GMAGGCC 253
K + AGGCC
Sbjct: 190 KGLGQNVEQKTAGGCC 205
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + MGI
Sbjct: 125 LTANKVVATETAKAFADEMGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A +I D+ + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VNQKTSCC 201
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 142/251 (56%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 MA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ G + ++ P
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERM-GSSIATNNTKANVNVSPGH 192
Query: 246 G---GMAGGCC 253
G +GGCC
Sbjct: 193 GVSNSQSGGCC 203
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 143/249 (57%), Gaps = 53/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV V K
Sbjct: 125 MT-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+++ G+ F+ETSAK N+E+AF+ +A I ++ G + V + + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERM-GNTAINNKPTVQVGQGSNV 192
Query: 245 RGGMAGGCC 253
+ G AGGCC
Sbjct: 193 QSGSAGGCC 201
>gi|242018600|ref|XP_002429762.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514774|gb|EEB17024.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 210
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/247 (46%), Positives = 145/247 (58%), Gaps = 64/247 (25%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTT---FISTIGIDFKIKTVDLKGKKIKL 60
KTYD+LFKLLLIGDSGVGKT +LF + F+ GIDFK++T+D+ GKKIKL
Sbjct: 3 KTYDYLFKLLLIGDSGVGKT-ILFMIGIKTTSVNLLIFLVVAGIDFKVRTIDVDGKKIKL 61
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+E+A+ DVEKM+L
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKNWIRNIEENASADVEKMLL 121
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G + + + +T EK
Sbjct: 122 GNKCELEEKRQ--------------------VTKEK------------------------ 137
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
GE +A EYG++F+ETSAKA+I+++ AF LA I KT + LEA +
Sbjct: 138 -------GEQLAIEYGIKFIETSAKASIHVQDAFYMLARDIKAKTEKK--LEASN----- 183
Query: 241 KKPDRGG 247
P +GG
Sbjct: 184 --PPKGG 188
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L+ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEAKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +V+D+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVFDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 IA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P +
Sbjct: 138 EFADSL----GIPFLETSAKNATNVEQAFLTMARQIKERMGSTTVNNKPTVSVQQGTGVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 QGSAGGCC 201
>gi|190345453|gb|EDK37339.2| hypothetical protein PGUG_01437 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 139/250 (55%), Gaps = 52/250 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGKKIKLQ+W
Sbjct: 8 RAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQVW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 68 DTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVETWYQTVTQHANEDAQIFLVGNK 127
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D+ + + V
Sbjct: 128 CD-------------------------------------------DDSSRQ--------V 136
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
G+ +A + V F+E SAK+N N++ F ELA I +K D P + + +
Sbjct: 137 STEEGQQLAAKLNVPFLEASAKSNHNVDSIFYELAGLIQEKHGDNDAGTGPSGIDVSQGS 196
Query: 244 DRGGMAGGCC 253
+ G CC
Sbjct: 197 NT-GFKNNCC 205
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 144/255 (56%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D G++ V + T K F
Sbjct: 121 GNKSDLTGKK------------------VVEYTVAKEF---------------------- 140
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
A + + F+ETSAK N+E+AF+ +A I D+ S P A T+
Sbjct: 141 -----------ADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSATAPTGAAKSSTV 189
Query: 240 DK-KPDRGGMAGGCC 253
+ + + GCC
Sbjct: 190 TPGQSVQSQQSNGCC 204
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 142/248 (57%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ ++ + T + +GI
Sbjct: 125 LSDKKVVSSETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A I ++ + + P + T+ +
Sbjct: 146 ------------PFMETSAKNASNVEQAFMAMAAEIKNRMASQ-PANSARPATVQIRGQP 192
Query: 246 GGMAGGCC 253
GCC
Sbjct: 193 VNQKAGCC 200
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 144/256 (56%), Gaps = 57/256 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ YD+LFKLL+IGDS VGK+C+L RF+DD+++ T+ISTIG+DFKI+TV+L+GK KL
Sbjct: 1 MSSNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +AN V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQWLHEIDRYANHSVSKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + HT T + +GI
Sbjct: 121 GNKCDLTDNKLVHTHTAKAFADELGI---------------------------------- 146
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL---EAPDRV 237
F+ETSAK +IN+E+AF+ +A I +K G P A + V
Sbjct: 147 -----------------PFLETSAKDSINVEQAFLTMAAEIKNKM-GSQPTGSKSAAESV 188
Query: 238 TIDKKPDRGGMAGGCC 253
+ +P + CC
Sbjct: 189 QMKGQPIQQNT--NCC 202
>gi|62702214|gb|AAX93140.1| unknown [Homo sapiens]
Length = 157
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 126/212 (59%), Gaps = 57/212 (26%)
Query: 44 IDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKW 103
IDFKIKTV+L+GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KW
Sbjct: 1 IDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW 60
Query: 104 LRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILK 163
LRNIDEHANEDVE+M+LG D
Sbjct: 61 LRNIDEHANEDVERMLLGNKCDM------------------------------------- 83
Query: 164 WLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD 223
+D +VV K +GE IARE+G+RF ETSAKANINIEKAF+ LA I
Sbjct: 84 ----------DDKRVVP----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 129
Query: 224 KTSGRDPLEAPDRVTIDKKPDRG--GMAGGCC 253
KT P++ P+ +D G G CC
Sbjct: 130 KT----PVKEPNSENVDISSGGGVTGWKSKCC 157
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 142/248 (57%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ ++ + T + +GI
Sbjct: 125 LSDKKVVSSETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A I ++ + + P + T+ +
Sbjct: 146 ------------PFMETSAKNASNVEQAFMAMAAEIKNRMASQ-PANSARPATVQIRGQP 192
Query: 246 GGMAGGCC 253
GCC
Sbjct: 193 VNQKAGCC 200
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A++ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDSVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ T T + +GI
Sbjct: 125 LTAQKVVSTETAQAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A +I ++ + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKSGCC 201
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 141/251 (56%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +ANE V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANESVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
V N V
Sbjct: 125 L---------------------------------------------------VENKVVDT 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP---DRVTIDKK 242
G+A+A E G+ F+ETSAK +IN+E+AF+ +A I K G P A V I +
Sbjct: 134 QMGKALADELGIPFLETSAKDSINVEQAFLTMAGEI-KKKMGNQPAGAKRTGSTVQIKGQ 192
Query: 243 PDRGGMAGGCC 253
P G CC
Sbjct: 193 PIE--QKGNCC 201
>gi|320584083|gb|EFW98295.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 202
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 146/251 (58%), Gaps = 56/251 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KT+D KLLL+GDSGVGK+C+L RF DD FN +FI+TIGIDFKIKT++L G KIKLQ+W
Sbjct: 7 KTFDKTMKLLLVGDSGVGKSCLLLRFVDDKFNPSFITTIGIDFKIKTIELNGSKIKLQVW 66
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG-K 122
DTAGQERF TITT+YYRGAMGI++VYD+ +E SF+++ KW + +++HA ++ + ++G K
Sbjct: 67 DTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKKWYQTVNQHAKDEAQLFLVGNK 126
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
DT ++
Sbjct: 127 CDDTESRQ---------------------------------------------------- 134
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK 242
V + +GE +A E V FME SAK+ +N+ + F +LA+ I +K +G D D++ ++++
Sbjct: 135 VSEKQGELLAEELNVPFMEASAKSGLNVNEVFYKLASLILEK-NGDDLAVPADKLNVNQQ 193
Query: 243 PDRGGMAGGCC 253
G + CC
Sbjct: 194 GSATGSS--CC 202
>gi|255722273|ref|XP_002546071.1| GTP-binding protein SAS1 [Candida tropicalis MYA-3404]
gi|240136560|gb|EER36113.1| GTP-binding protein SAS1 [Candida tropicalis MYA-3404]
Length = 211
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 133/223 (59%), Gaps = 51/223 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGK+IKLQ
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE VN
Sbjct: 127 NKCD-------------------------------------------DE--------VNR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V K +G+ +A + + F+E SAK+N N++ F ELA I +K
Sbjct: 136 QVSKEQGQELAAKLNIPFLEASAKSNENVDSIFYELAGIIQEK 178
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 134/226 (59%), Gaps = 51/226 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 60 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 119
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 179
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
N V
Sbjct: 180 L---------------------------------------------------TANKVVSY 188
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
G+A A E G+ FMET AK N+E+AF+ +A I ++ + + +
Sbjct: 189 ETGKAFADEIGIPFMETGAKNATNVEQAFMAMAADIKNRMASQPAM 234
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 143/255 (56%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLSEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D G++ ++ Y + E
Sbjct: 121 GNKSDLTGKK----------------VVEYSVAKE------------------------- 139
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
A + + F+ETSAK N+E+AF+ +A I D+ S P A T+
Sbjct: 140 ----------FADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSGAAKSSTV 189
Query: 240 DK-KPDRGGMAGGCC 253
+ + GGCC
Sbjct: 190 TPGQTVQSQTGGGCC 204
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 142/251 (56%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 MA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ G + ++ P
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERM-GSSIATNNTKANVNVAPGH 192
Query: 246 G---GMAGGCC 253
G +GGCC
Sbjct: 193 GVSNNQSGGCC 203
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 143/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + +ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKPA-GGGCC 201
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 144/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S++N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
A + F+ETSAK N+E+AF+ +A I K G D+ + ID P
Sbjct: 140 ------ADSLAIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGATAGGDKPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
R GGCC
Sbjct: 193 VRQS-GGGCC 201
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 142/251 (56%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + T + MGI
Sbjct: 125 LTANKVVSSETAKAFADEMGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA---PDRVTIDKK 242
FMETSAK N+E+AF+ +A +I D+ + + P A P V I +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAASIKDRMASQ-PAAANARPPTVQIRGQ 192
Query: 243 PDRGGMAGGCC 253
P CC
Sbjct: 193 P--VNQKTSCC 201
>gi|344304203|gb|EGW34452.1| GTP-binding protein SAS1 [Spathaspora passalidarum NRRL Y-27907]
Length = 209
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 132/221 (59%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGK+IKLQ+W
Sbjct: 10 RAYDMIMKLLLVGDSGVGKSCILLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVW 69
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+++YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 70 DTAGQERFRTITTAYYRGAMGIIIIYDVTDSRSFENVENWYQTVTQHANEDAQIFLVGNK 129
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D DE VN V
Sbjct: 130 CD-------------------------------------------DE--------VNRQV 138
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ +G+ +A + F+E+SAK N N++ F+ELA I DK
Sbjct: 139 SREQGQELAARLNIPFLESSAKTNENVDSIFLELAGIIQDK 179
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 149/261 (57%), Gaps = 65/261 (24%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 121 GNKS--------------------------DLTSKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT--------SGRDPLE 232
V K A + G+ F+ETSAK N+E+AF+ +A I D+ +G+
Sbjct: 134 YSVAKE----FADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTTTAAGTGKSSTI 189
Query: 233 APDRVTIDKKPDRGGMAGGCC 253
P + T+ ++ AGGCC
Sbjct: 190 TPGQ-TVQQQA-----AGGCC 204
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 143/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +WL ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKQWLNEIDRYASENVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K V
Sbjct: 123 ------------------------CDLTDKKV-------------------------VSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+A A E G+ FMETSAK +N+E+AF+ ++ +I D+ + + + T+ +
Sbjct: 134 ETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANSARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VEQKTSCC 201
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 140/250 (56%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
G++ V + T K F
Sbjct: 125 LTGKK------------------VVEYTVAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTIDKKP 243
A + + F+ETSAK N+E+AF+ +A I D+ +S P +
Sbjct: 140 ------ADQLAIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSAAPGAGKSSTITPGQS 193
Query: 244 DRGGMAGGCC 253
GGCC
Sbjct: 194 VNQQQGGGCC 203
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/179 (51%), Positives = 125/179 (69%), Gaps = 6/179 (3%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVY-----DITNEKSFDNILKWL-RNIDEHANEDP 176
D + T +GI + +I EK+F N+ + + +D +E P
Sbjct: 125 CDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSEQP 183
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 88/144 (61%), Gaps = 17/144 (11%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E +
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 180 NSW-----VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI---YDKTSGRDPL 231
W V +G+ +A E G+ F+E SAK NINIEKAF LA+ I D + P
Sbjct: 125 CDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSEQP- 183
Query: 232 EAPDRVTIDKK-PDRGGMAGG-CC 253
V+ID++ P G GG CC
Sbjct: 184 -GSQGVSIDQQGPGPNGSTGGKCC 206
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/242 (41%), Positives = 143/242 (59%), Gaps = 51/242 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MA YD+LFKLLLIGDS VGK+C+L RF+DDA+ T+ISTIG+DFKI+TV+L GK +KL
Sbjct: 1 MASIEYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +A++ V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VV+
Sbjct: 121 GNKCDLV-----------------------------------------------DSKVVD 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
+ +A+A G+ F+ETSAK +IN+EKAF+ +++ I + + + E V +
Sbjct: 134 T----EEAKALADSLGMTFLETSAKESINVEKAFLTMSSEIKKRMATQPAAERKPTVHLH 189
Query: 241 KK 242
K
Sbjct: 190 GK 191
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 60 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 119
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 179
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 180 LTTKK------------------VVDYTTAKEFADSL----------------------- 198
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 199 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 248
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 249 VKQS-GGGCC 257
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 143/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNTT----------------------- 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 136 --AKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKPA-GGGCC 201
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ I +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIARYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 125 LTTKK------------------VVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + + F+E SAK N+E+AF+ +A I ++ P +V ID P
Sbjct: 140 ------ADQLNMPFLEASAKNVTNVEQAFMTMAAEIKNRVGPPAPSGPSGQVKIDSTPIS 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 SKSGTGCC 201
>gi|121714245|ref|XP_001274733.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
gi|119402887|gb|EAW13307.1| Rab GTPase SrgA, putative [Aspergillus clavatus NRRL 1]
Length = 206
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 128/185 (69%), Gaps = 8/185 (4%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YDFL KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVY-----DITNEKSFDNILKWL-RNIDEHANED-- 175
D + T +GI + +I EK+F N+ + + +D +E
Sbjct: 125 CDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASAIKKGMDTSKSEQAG 184
Query: 176 PQVVN 180
PQ VN
Sbjct: 185 PQGVN 189
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/129 (48%), Positives = 81/129 (62%), Gaps = 11/129 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E +
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 124
Query: 180 NSW-----VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEA 233
W V +G+ +A E G+ F+E SAK NINIEKAF LA+AI + +
Sbjct: 125 CDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASAIKKGMDTSKSEQAG 184
Query: 234 PDRVTIDKK 242
P V ID +
Sbjct: 185 PQGVNIDPQ 193
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
A G+ F+E SAK+ N+E+AF+ +A I + ++ V I P
Sbjct: 140 ------ADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAGGSEKSNVKIQSTP 193
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 194 VKTS-SGGCC 202
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 146/255 (57%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YDFLFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF ++ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFTHVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 121 GNKS--------------------------DLTSKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
V K A + + F+ETSAK N+E+AF+ +A I D+ S P A T+
Sbjct: 134 YSVAKE----FADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSTPSGAAKSSTV 189
Query: 240 DK-KPDRGGMAGGCC 253
+ + +G CC
Sbjct: 190 TPGQTVQSQQSGSCC 204
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 54/243 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSF-DNILKWLRNIDEHANEDPQVVNSWVC 184
++ V D T KSF DN+
Sbjct: 125 LTTKK------------------VVDYTTAKSFADNL----------------------- 143
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
G+ F+ETSAK++ N+E+AF+ +A I K G R + P+
Sbjct: 144 -----------GIPFLETSAKSSTNVEQAFMTMAAEI-KKRMGPGATAGGLREVQRQNPE 191
Query: 245 RGG 247
+ G
Sbjct: 192 QAG 194
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 140/248 (56%), Gaps = 54/248 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+D++F+ T+ISTIG+DFKI+T+DL GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF N+ WL+ I+ +AN V ++++G D
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKSWLQEIEHYANSTVNRLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
T+ D N
Sbjct: 125 LPKSRAVDTV---------------DAMN------------------------------- 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A+E+ + F+ETSAK IN+E AF+E+A I T+ P+++
Sbjct: 139 -----FAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTA---PMQSMSSNVTVNSTQP 190
Query: 246 GGMAGGCC 253
+GGCC
Sbjct: 191 VTKSGGCC 198
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + MGI
Sbjct: 125 LTANKVVATETAKAFADEMGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+++AF+ +A +I D+ + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VNQKTSCC 201
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 146/253 (57%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTID 240
G+ F+ETSAK N+E++F+ +A I + TSG V I
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATSGG---AEKSNVKIQ 193
Query: 241 KKPDRGGMAGGCC 253
P + +GGCC
Sbjct: 194 STPVKQS-SGGCC 205
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 144/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL I+ +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLEEINRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDN------------------------- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 134 PTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSSP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKPA-SGGCC 201
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 146/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S++N+ +WL+ I+ +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIERYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSLS---------------------- 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ F+ETSAK N+E++F+ +A I K G DR + ID P
Sbjct: 145 -----------IPFLETSAKNATNVEQSFMTMAAEI-KKRMGPGATAGGDRPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ G GGCC
Sbjct: 193 VKQG-GGGCC 201
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 143/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A G+ F+ETSAK N+E+AF+ +A I K G ++ + P
Sbjct: 140 ------ADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGATVGGEKPNVKLTPGT 192
Query: 246 G--GMAGGCC 253
+GGCC
Sbjct: 193 SVKPSSGGCC 202
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 142/251 (56%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DDA+ ++ISTIG+DFKI+T++ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANDSVCKLLIGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +VV++
Sbjct: 125 MV-----------------------------------------------ESKVVST---- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR---DPLEAPDRVTIDKK 242
G+A+A E G+ F+ETSAK + N+E+AF+ +A I K + V + +
Sbjct: 134 ETGKALADELGIPFLETSAKDSTNVEQAFLTIAGEIKKKMGSHTNANKTSGSGTVQMKGQ 193
Query: 243 PDRGGMAGGCC 253
P + GGCC
Sbjct: 194 PIQQNNGGGCC 204
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A I ++ + + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKSGCC 201
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 144/255 (56%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 121 GNKS--------------------------DLTSKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVT-- 238
V K A + + F+ETSAK N+E+AF+ +A I D+ P + +
Sbjct: 134 YSVAKD----FADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTASGPGKTSTV 189
Query: 239 IDKKPDRGGMAGGCC 253
+ + +GGCC
Sbjct: 190 TPGQSVQQQASGGCC 204
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 23 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 82
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 83 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 142
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED +VV V K
Sbjct: 143 M-----------------------------------------------EDKKVVEYTVAK 155
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 156 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 211
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 212 SGSAGGCC 219
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 142/254 (55%), Gaps = 52/254 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 121 GNKS--------------------------DLTSKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
V K A + + F+ETSAK N+E+AF+ +A I D+ S P TI
Sbjct: 134 YSVAKE----FADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAGGAKSTTI 189
Query: 240 DKKPDRGGMAGGCC 253
+ GCC
Sbjct: 190 TPGQSVQQQSSGCC 203
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 145/250 (58%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 196
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 197 VKQS-SGGCC 205
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/240 (42%), Positives = 140/240 (58%), Gaps = 55/240 (22%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDTA
Sbjct: 75 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 134
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 135 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 194
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+ T T + MGI
Sbjct: 195 TANKVVATETAKAFADEMGI---------------------------------------- 214
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA---PDRVTIDKKP 243
FMETSAK IN+E+AF+ +A +I D+ + + P A P V I +P
Sbjct: 215 -----------PFMETSAKNAINVEQAFMAMAASIKDRMASQ-PAAANARPATVQIRGQP 262
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 1 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 60
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 61 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 120
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED +VV V K
Sbjct: 121 M-----------------------------------------------EDKKVVEYTVAK 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 134 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 189
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 190 SGSAGGCC 197
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
Length = 200
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 63
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 64 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED +VV V K
Sbjct: 124 M-----------------------------------------------EDKKVVEYTVAK 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 137 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 192
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 193 SGSAGGCC 200
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 49 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 108
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 109 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 168
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 169 LTTKK------------------VVDYTTAKEFADSL----------------------- 187
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 188 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 237
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 238 VKQS-GGGCC 246
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 40 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 99
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 100 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 159
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 160 LTTKK------------------VVDYTTAKEFADSL----------------------- 178
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 179 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 228
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 229 VKQS-GGGCC 237
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 135/221 (61%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 8 KGYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 68 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFKTVNEHANDEAQLLLVGNK 127
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +V V
Sbjct: 128 SDM------------------------------------------------DTRV----V 135
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GE++A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 136 TYEQGESLAKELGLPFVESSAKNDDNVNEIFFTLAKLIQEK 176
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + T + MGI
Sbjct: 125 LTANKVVSSETAKAFADEMGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A +I D+ + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAASIKDRMASQPAASNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VNQKTSCC 201
>gi|294658349|ref|XP_460687.2| DEHA2F07568p [Debaryomyces hansenii CBS767]
gi|202953065|emb|CAG89024.2| DEHA2F07568p [Debaryomyces hansenii CBS767]
Length = 207
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 140/253 (55%), Gaps = 56/253 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
++YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ GKKIKLQ+W
Sbjct: 8 RSYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESNGKKIKLQVW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L+YD+T+ ++F+N+ W + +HANED + ++G
Sbjct: 68 DTAGQERFRTITTAYYRGAMGIVLIYDVTDSRTFENVENWYSTVTQHANEDAQIFLVGNK 127
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D DE N V
Sbjct: 128 CD-------------------------------------------DEE--------NRQV 136
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPLEAPDRVTID 240
K +G+ +A + + F+E SAK+N N++ F ELA I +K T G + V +
Sbjct: 137 SKEQGQELASKLNIPFLEASAKSNENVDPIFYELAGIIQEKHVNTEGAQTASSAGGVDVS 196
Query: 241 KKPDRGGMAGGCC 253
+ P+ CC
Sbjct: 197 QTPNT--FKSNCC 207
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED +VV V K
Sbjct: 125 M-----------------------------------------------EDKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 139/248 (56%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +W+ ID +AN+ V KM++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYANDKVNKMLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + T Y ++GI P
Sbjct: 125 LASKRAVDTSVAKEYADSLGI-----------------------------P--------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK + N+E+AFI +A I + + + P +I
Sbjct: 147 -------------FLETSAKDSTNVEQAFITMAAEIKARMA-QAPAGKEGSASIQVGKGS 192
Query: 246 GGMAGGCC 253
GCC
Sbjct: 193 EVTKKGCC 200
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 146/254 (57%), Gaps = 54/254 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
K YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQ
Sbjct: 30 GKGFYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 89
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G
Sbjct: 90 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 149
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ++ V D T K F + L
Sbjct: 150 NKCDLTTKK------------------VVDYTTAKEFADSL------------------- 172
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTI 239
G+ F+ETSAK N+E++F+ +A I + ++ V I
Sbjct: 173 --------------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKI 218
Query: 240 DKKPDRGGMAGGCC 253
P + +GGCC
Sbjct: 219 QSTPVKQS-SGGCC 231
>gi|193806493|sp|Q92928.2|RAB1C_HUMAN RecName: Full=Putative Ras-related protein Rab-1C; Short=hRab1c
gi|119578676|gb|EAW58272.1| hCG2011109 [Homo sapiens]
Length = 201
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 142/250 (56%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA G ++VYD+T+++S+ N+ +WL+ ID HA+E+V K+++G
Sbjct: 65 AGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKQMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKPA-GGGCC 201
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 144/251 (57%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D KLL+IGDSGVGKTC+L R+++D+F+ TFI+TIGIDFKIK +DL K+IKLQIWDT
Sbjct: 8 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITTSY+RGA GI+LVYD+T++KSF++I W+ I +HA+ V K+++G D
Sbjct: 68 AGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ED + V +
Sbjct: 128 M----------------------------------------------DEDRE-----VSR 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDP-LEAPDRVTIDKK 242
G +A EYG++F ETSAK +IN+EK FI +A + D+ G +P A V ++ +
Sbjct: 137 EEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPNPGSRAAGNVNLNAQ 196
Query: 243 PDRGGMAGGCC 253
+ GCC
Sbjct: 197 ASK--KKTGCC 205
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 196
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 197 VKQS-GGGCC 205
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQWLQEIDRYACENVNKLLVGNQCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T Y ++GI
Sbjct: 128 LTHKKVVDYQTAKEYADSLGI--------------------------------------- 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
F+ETSAK N+E+AF+ +A I ++ P AP + P
Sbjct: 149 ------------PFLETSAKNATNVEQAFMTMAAEIKNRMG---PPSAPGSAGVKINPSV 193
Query: 245 --RGGMAGGCC 253
GGCC
Sbjct: 194 PVEPQPGGGCC 204
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 143/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 18 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 77
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 78 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 136
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 137 -------------------------DLTTKKVVDNTT----------------------- 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 149 --AKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 205
Query: 244 DRGGMAGGCC 253
+ GCC
Sbjct: 206 VKQA-GSGCC 214
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 143/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASDNVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K V
Sbjct: 123 ------------------------CDLTDKKV-------------------------VSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+A A E G+ FMETSAK +N+E+AF+ ++ +I D+ + + T+ +
Sbjct: 134 ETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VEQKTSCC 201
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 144/253 (56%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y +LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 128 LTTKK------------------VVDYTTAKEF--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTID 240
A G+ F+ETSAK N+E+AF+ +A I + TSG V I
Sbjct: 143 ------ADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSE---KSNVNIQ 193
Query: 241 KKPDRGGMAGGCC 253
P + +GGCC
Sbjct: 194 STPVKSS-SGGCC 205
>gi|146419610|ref|XP_001485766.1| hypothetical protein PGUG_01437 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 139/250 (55%), Gaps = 52/250 (20%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGKKIKLQ+W
Sbjct: 8 RAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKKIKLQVW 67
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 68 DTAGQERFRTITTAYYRGAMGIVLIYDVTDLRSFENVETWYQTVTQHANEDAQIFLVGNK 127
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D+ + + V
Sbjct: 128 CD-------------------------------------------DDSSRQ--------V 136
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
G+ +A + V F+E SAK+N N++ F ELA I +K D P + + +
Sbjct: 137 STEEGQQLAAKLNVPFLEASAKSNHNVDSIFYELAGLIQEKHGDNDAGTGPSGIDVSQGS 196
Query: 244 DRGGMAGGCC 253
+ G CC
Sbjct: 197 NT-GFKNNCC 205
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 53/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ T T + +GI
Sbjct: 125 LTSQKVVSTETAQAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
F+ETSAK N+E+AF+ + AI + + + A P V I +P
Sbjct: 146 ------------PFLETSAKNATNVEEAFMAMTAAIKTRMASQPSGGAKPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 193 VNQQQSGCC 201
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 142/251 (56%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV V K
Sbjct: 125 MT-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ G + +++ P
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERM-GSSIATNNTKASVNVSPGH 192
Query: 246 G---GMAGGCC 253
G +GGCC
Sbjct: 193 GVSNNSSGGCC 203
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 125 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 184
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 185 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 244
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 245 MS-----------------------------------------------DKKVVEYTVAK 257
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 258 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNKPTVQVGQGQGVQ 313
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 314 SGSAGGCC 321
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 148/255 (58%), Gaps = 54/255 (21%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
+ ++ +D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKL
Sbjct: 55 LRRRMHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 114
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++
Sbjct: 115 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLV 174
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ++ V D T K F + L
Sbjct: 175 GNKCDLTTKK------------------VVDYTTAKEFADSL------------------ 198
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VT 238
G+ F+ETSAK N+E++F+ +A I + ++ V
Sbjct: 199 ---------------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVK 243
Query: 239 IDKKPDRGGMAGGCC 253
I P + +GGCC
Sbjct: 244 IQSTPVKQS-SGGCC 257
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 196
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 197 VKQS-GGGCC 205
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 146/245 (59%), Gaps = 53/245 (21%)
Query: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQE 69
KLLLIGDS VGK+ +L RF++D+F+ TFISTIG+DFK +T+D+ G+++KL IWDTAGQE
Sbjct: 13 LKLLLIGDSSVGKSSLLLRFAEDSFSQTFISTIGVDFKTRTIDIDGEQVKLSIWDTAGQE 72
Query: 70 RFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQ 129
RF TIT +YYRGA GI+LVYDIT+E SF++I W+RNI+EHA+E+V K+++G D
Sbjct: 73 RFRTITAAYYRGANGIVLVYDITSESSFNSIRGWIRNIEEHASENVCKILVGNKADM--- 129
Query: 130 ERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGE 189
ED +VV+ K +G+
Sbjct: 130 --------------------------------------------EDRRVVS----KEQGQ 141
Query: 190 AIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP-DRGGM 248
A+A E+ ++F ETSAKA+IN+E+AF+ +A K +G P + + + +D +
Sbjct: 142 ALANEFRIKFFETSAKADINVEEAFVCIARE-SKKLAGPPPDKGSNTLKVDPTTGNNAPK 200
Query: 249 AGGCC 253
A CC
Sbjct: 201 AASCC 205
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 143/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 128 LTTKK------------------VVDYTTAKEF--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
A G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 143 ------ADSLGILFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 196
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 197 VKQS-GGGCC 205
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 143/250 (57%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+ F+ETSAK N+E+AF+ +A I + ++ + P
Sbjct: 144 ----------GIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGGEKPNVKLTPGT 193
Query: 246 G--GMAGGCC 253
+GGCC
Sbjct: 194 TVKPSSGGCC 203
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 141/252 (55%), Gaps = 51/252 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQ
Sbjct: 7 PQPPYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G
Sbjct: 67 IWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ED +VV
Sbjct: 127 NKSDM-----------------------------------------------EDKKVVEY 139
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
V K +++ G+ F+ETSAK N+E+AF+ +A I ++ P
Sbjct: 140 TVAKEFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQG 195
Query: 242 KPDRGGMAGGCC 253
+ + G AGGCC
Sbjct: 196 QGVQSGSAGGCC 207
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 141/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 30 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 89
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 90 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 149
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV+ V K
Sbjct: 150 MS-----------------------------------------------DKKVVDYTVAK 162
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 163 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERIGTTTANNKPAVQVGQGQGVQ 218
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 219 SGSAGGCC 226
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 147/260 (56%), Gaps = 67/260 (25%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E +F N+ +WL+ I+ +A E V K+++G
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQWLQEIERYACEGVNKLLVGNKA- 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+TN K+ D E A +
Sbjct: 127 -------------------------DLTNSKAVDF---------ESAKQ----------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT------------SGRDPLEA 233
+A E G+ F++TSAK N+E+AF+ +A I D+ +G+ L+
Sbjct: 142 -----LADELGIAFLDTSAKDATNVEQAFLTMAKQIKDRMGVSAMQNGSAGGAGKSTLKV 196
Query: 234 PDRVTIDKKPDRGGMAGGCC 253
+ + +GGCC
Sbjct: 197 GQGQNVQASSN----SGGCC 212
>gi|312087905|ref|XP_003145654.1| RAB-10 protein [Loa loa]
gi|307759181|gb|EFO18415.1| RAB-10 protein [Loa loa]
Length = 176
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 122/208 (58%), Gaps = 60/208 (28%)
Query: 43 GIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILK 102
IDFKIKT++LKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSFDNI K
Sbjct: 16 SIDFKIKTIELKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK 75
Query: 103 WLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIL 162
WLRNIDEHA+EDVEKM+LG D G+ R
Sbjct: 76 WLRNIDEHASEDVEKMLLGNKCDM-GERRV------------------------------ 104
Query: 163 KWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY 222
V + RGE IA ++G+RF+ETSAKANI I+KAF +LA AI
Sbjct: 105 --------------------VSRERGEKIACDHGIRFLETSAKANIQIDKAFYDLAEAIL 144
Query: 223 DKTSGRD---------PLEAPDRVTIDK 241
DK +D P E VTI +
Sbjct: 145 DKMPVKDEGMKQPTIRPAETQSNVTISR 172
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTMKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED +VV V K
Sbjct: 125 M-----------------------------------------------EDKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 141/249 (56%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + T + +GI
Sbjct: 125 LTANKVVSSETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
FMETSAK N+E+AF+ +A I ++ + + A P V I +P
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 193 -VNQKAGCC 200
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 135/221 (61%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHA ++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHATDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +VV
Sbjct: 135 SDM------------------------------------------------DTRVVTV-- 144
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 145 --DQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
>gi|45201075|ref|NP_986645.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|44985858|gb|AAS54469.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|374109896|gb|AEY98801.1| FAGL021Wp [Ashbya gossypii FDAG1]
Length = 212
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LL+GDSGVGK+C+L RF +D F+ +FI+TIGIDFKIK VD+ GKKIKLQ+W
Sbjct: 14 KNYDSIMKILLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKAVDINGKKIKLQLW 73
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F+NI +W +++HANE+ + +++G
Sbjct: 74 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQWFTTVNQHANEEAQLLLVGNK 133
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
KD +D A V
Sbjct: 134 KD------------------------------------------MDTRA----------V 141
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GE++A+E GV F+E SAK + N+ F LA I +K
Sbjct: 142 TYEQGESLAKELGVPFIEASAKDDENVSDIFFTLAKLIQEK 182
>gi|403216653|emb|CCK71149.1| hypothetical protein KNAG_0G00930 [Kazachstania naganishii CBS
8797]
Length = 213
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 13 KNYDSIMKILLVGDSGVGKSCLLVRFVEDRFNPSFITTIGIDFKIKTVDINGKKVKLQLW 72
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F+NI +W + EHAN+D + +++G
Sbjct: 73 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFNNIRQWFTTVTEHANDDAQLLLVGNK 132
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +VV+
Sbjct: 133 SDM------------------------------------------------DTRVVS--- 141
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+ +GE +A E G+ F+E+SAK + N+ + F L I DK
Sbjct: 142 -REQGETLAAELGLPFVESSAKDDDNVNEIFFTLTKLIQDK 181
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 143/250 (57%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+ F+ETSAK N+E+AF+ +A I + ++ + P
Sbjct: 144 ----------GIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGGEKPNVKLTPGT 193
Query: 246 G--GMAGGCC 253
+GGCC
Sbjct: 194 TVKTSSGGCC 203
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 106/251 (42%), Positives = 146/251 (58%), Gaps = 55/251 (21%)
Query: 5 TYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWD 64
+ D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWD
Sbjct: 135 SSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 194
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
TAGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 195 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS 254
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D +TT V D T K F + L
Sbjct: 255 D---------LTTKK---------VVDNTTAKEFADSL---------------------- 274
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKK 242
G+ F+ETSAK N+E+AF+ +A I K G +R + ID
Sbjct: 275 -----------GIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDST 322
Query: 243 PDRGGMAGGCC 253
P + GGCC
Sbjct: 323 PVK-QAGGGCC 332
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 144/250 (57%), Gaps = 56/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 15 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 74
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 75 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 133
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 134 -------------------------DLTTKKVVDNTT----------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 146 --AKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 202
Query: 244 DRGGMAGGCC 253
+ AGG C
Sbjct: 203 VK--PAGGGC 210
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 143/252 (56%), Gaps = 55/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ WL ID++A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDVESFNNVKTWLSEIDKYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ DP + +
Sbjct: 125 LIAKKAV------------------------------------------DPGMAKEF--- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
A G+ F+ETSAK + N+E+AFI +AT I + + + P P V + +
Sbjct: 140 ------ADSLGIPFLETSAKNSTNVEEAFIRMATDIKSRVAAQGPGAGRPGGVKLPASGE 193
Query: 245 RGGM---AGGCC 253
R GCC
Sbjct: 194 RAQQKKKEDGCC 205
>gi|413932609|gb|AFW67160.1| hypothetical protein ZEAMMB73_060765 [Zea mays]
Length = 180
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 109/126 (86%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQER 131
+R
Sbjct: 132 MDESKR 137
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 47/51 (92%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
DTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDN 120
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 141/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV+ V K
Sbjct: 125 MS-----------------------------------------------DKKVVDYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERIGTTTANNKPAVQVGQGQGVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 144/248 (58%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ T+ISTIG+DFKI+T+DL GK +KLQIWDT
Sbjct: 7 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDTYISTIGVDFKIRTIDLDGKTVKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+NI +WL ID +A+++V K+++G D
Sbjct: 67 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYASDNVCKLLVGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV++
Sbjct: 127 LV-----------------------------------------------DSKVVDT---- 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+ + A G+ F+ETSAK +IN+E+AF+ +++ I + + + +E V + K
Sbjct: 136 EKAKDFADSLGIPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVERRPTVHVHMKGQP 195
Query: 246 GGMAGGCC 253
CC
Sbjct: 196 IQQKSSCC 203
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 143/257 (55%), Gaps = 62/257 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL ID +A ++V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
HT V D T K +
Sbjct: 128 ------LHT------------KKVVDYTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + G+ F+ETSAK +N+E+AF+ +A I K+ P T K D+
Sbjct: 143 ------ADQLGIPFLETSAKNAMNVEQAFMTMAAEI--KSRVGPPSSGASDQTSKLKIDQ 194
Query: 246 G---------GMAGGCC 253
G G GCC
Sbjct: 195 GHNIDTSGIQGSKSGCC 211
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 12 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 72 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV + K
Sbjct: 132 MA-----------------------------------------------DKKVVEYTMAK 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 145 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTTTVNNKPTVQVGQGQGVQ 200
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 201 SGSAGGCC 208
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 143/248 (57%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD+++ ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 138 YDLLFKLLLIGDSGVGKSCLLLRFADDSYSDSYISTIGVDFKIRTIELGGKTVKLQIWDT 197
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ +F N+ +WL+ ID +A E V+K+++G D
Sbjct: 198 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFSNVKQWLQEIDRYACEGVDKLLVGNKSD 257
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 258 LQQKK------------------VVDYTVAKEF--------------------------- 272
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL-EAPDRVTIDKKPD 244
A + + F+ETSAK N+E+AF+ +A I ++ GR L ++ +P
Sbjct: 273 ------ADQLAIPFLETSAKNATNVEQAFLVMAEHIKRRSIGRTDLRHLLSTRPLESRPS 326
Query: 245 RGGMAGGC 252
R +A C
Sbjct: 327 RSVVARTC 334
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK IN+E+AF+ +A I ++ + + T+ +
Sbjct: 146 ------------PFMETSAKNAINVEQAFMAMAADIKNRMASQPAANNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQNTGCC 201
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 147 ----------GIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 196
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 197 VKQS-GGGCC 205
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S++N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 125 LTTKK------------------VVDYTTAKEFADSL----------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ F+ETSAK N+E+AF+ +A I K G D+ + I+ P
Sbjct: 144 ----------AIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGATTGGDKPNLKIESTP 192
Query: 244 DRGGMAGGCC 253
R GGCC
Sbjct: 193 VRQS-GGGCC 201
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 141/250 (56%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF DD++ ++ISTIG+DFKI+TV+ K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ YD E
Sbjct: 125 LTANR----------------AVSYDTAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLE--APDRVTIDKKP 243
A + G+ FMETSAK N+E+AF+ ++ +I ++ + + P V I +P
Sbjct: 139 -----FADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANNGRPPTVQIRGQP 193
Query: 244 DRGGMAGGCC 253
G GCC
Sbjct: 194 --VGQKSGCC 201
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 187 bits (474), Expect = 5e-45, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 51/215 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 684 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 743
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G D
Sbjct: 744 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL 803
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ V D T K F
Sbjct: 804 TTKK------------------VVDNTTAKEF---------------------------- 817
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A G+ F+ETSAK N+E+AF+ +A I
Sbjct: 818 -----ADSLGIPFLETSAKNATNVEQAFMTMAAEI 847
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 51/213 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFK++TV+L GK++KLQIWDT
Sbjct: 12 YDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SFDNI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRNWIRNIEQHASDNVNKILVGNKVD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T
Sbjct: 132 MDAKRVVST--------------------------------------------------- 140
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
+G+ +A EYG++F ETSAK N N+E+ F +A
Sbjct: 141 AQGQKLADEYGIKFFETSAKTNRNVEQVFFAMA 173
>gi|145512599|ref|XP_001442216.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831288|emb|CAI39277.1| rab_B67 [Paramecium tetraurelia]
gi|74833789|emb|CAI39358.1| rab_A67 [Paramecium tetraurelia]
gi|124409488|emb|CAK74819.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 139/257 (54%), Gaps = 58/257 (22%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
K +D+L K+LLIGDSGVGKT VL RF ++ F T++STIGIDFKIK++D++GKKIK+QI
Sbjct: 9 KDNFDWLIKILLIGDSGVGKTNVLLRFCENNFQQTYLSTIGIDFKIKSIDVEGKKIKMQI 68
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT +YY+GAMGI+LVY I ++ SF NI W+ I +HA+E+V K+++G
Sbjct: 69 WDTAGQERFKTITQTYYKGAMGIILVYSIDDKDSFTNISSWMNQIKQHASENVCKLLIGN 128
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D ++
Sbjct: 129 KIDVPNRQ---------------------------------------------------- 136
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY------DKTSGRDPLEAPDR 236
V K GEA+A++YGV F ETSAK + +AFI +A A+ + +P P +
Sbjct: 137 VSKEEGEALAKQYGVPFFETSAKDGTQVAEAFIAMARAVKANLQNEKSPNPSNPQNGPQQ 196
Query: 237 VTIDKKPDRGGMAGGCC 253
+ + D GCC
Sbjct: 197 LKPNNGADEEKKKTGCC 213
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 146/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SY RGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYCRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN C+
Sbjct: 124 -------------------------DLTTKKVVDNT---------------------TCQ 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+++ G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 138 EFADSL----GIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKPA-GGGCC 201
>gi|156838990|ref|XP_001643191.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113790|gb|EDO15333.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF DD FN +FI+TIGIDFKIKTV++ GKKIKLQ+W
Sbjct: 14 KNYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVEINGKKIKLQLW 73
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+EK+F NI +W + + EHAN++ + +++G
Sbjct: 74 DTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQWFKTVTEHANDEAQLLLVGNK 133
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D A V
Sbjct: 134 SD------------------------------------------MDTRA----------V 141
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GE +++E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 142 TYEQGEELSKELGIPFIESSAKNDENVNEIFSTLAKLIQEK 182
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
T + +GI
Sbjct: 125 LTANRAVDYDTAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK N+E+AF+ +A I ++ + + + + T+ K
Sbjct: 146 ------------PFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSSRPATVQMKGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VVQKSGCC 201
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 140/251 (55%), Gaps = 58/251 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ SF+N+ +WL I+ +A ++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQWLEEIERYACDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++R T T +GI
Sbjct: 125 LQTKKRVDTTTAMELANQLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK----TSGRDPLEAPDRVTIDK 241
F+ETSAK N+E+AF+ +A I ++ +S DP P V IDK
Sbjct: 146 ------------PFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAADP---PSAVKIDK 190
Query: 242 KPDRGGMAGGC 252
+ +G C
Sbjct: 191 GRNVEAKSGCC 201
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 143/253 (56%), Gaps = 63/253 (24%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 17 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 76
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 77 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS-- 134
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
D+T +K DN
Sbjct: 135 ------------------------DLTTKKVVDNT------------------------- 145
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK------TSGRDPLEAPDRVTID 240
+ A G+ F+ETSAK N+E+AF+ +A I + T G P + ID
Sbjct: 146 TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAATGGERP-----NLKID 200
Query: 241 KKPDRGGMAGGCC 253
P + GGCC
Sbjct: 201 STPVKPA-GGGCC 212
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 906 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 965
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 966 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 1025
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED + V V K
Sbjct: 1026 M-----------------------------------------------EDKKAVEYTVAK 1038
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 1039 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 1094
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 1095 SGSAGGCC 1102
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ + L+ ID +A E+V K ++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIVVVYDVTDQDSFNNLKQRLQEIDRYACENVNKPLVGDKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 125 LTTKK------------------VVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + + F+E SAK N+E+AF+ +A I ++ P +V ID P +
Sbjct: 140 ------ADQLSMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPSGQVKIDSTPVQ 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 SKSGSGCC 201
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A I ++ + + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKSGCC 201
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/250 (40%), Positives = 143/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 196
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 197 VKQS-GGGCC 205
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 143/249 (57%), Gaps = 55/249 (22%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 3 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 62
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 63 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS-- 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
D+T +K DN
Sbjct: 121 ------------------------DLTTKKVVDNT------------------------- 131
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKPD 244
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 132 TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTPV 190
Query: 245 RGGMAGGCC 253
+ GGCC
Sbjct: 191 KPA-GGGCC 198
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/258 (40%), Positives = 145/258 (56%), Gaps = 70/258 (27%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L K IKLQIWDT
Sbjct: 9 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTIKLQIWDT 68
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E V K+++G D
Sbjct: 69 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASESVNKLLVGNKCD 128
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 129 LTTKK------------------VVDYTTAKEY--------------------------- 143
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
A + GV F+ETSAK N+E+AF+ +A I ++ P D KP+
Sbjct: 144 ------ADQLGVPFLETSAKNATNVEQAFMTMAAEIKNRM-------GPVAAAGDSKPNV 190
Query: 245 ---------RGGMAGGCC 253
+GG GGCC
Sbjct: 191 KINASTPVKQGG--GGCC 206
>gi|367007798|ref|XP_003688628.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS 4417]
gi|357526938|emb|CCE66194.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS 4417]
Length = 214
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF DD FN +FI+TIGIDFKIKTV++ G+KIKLQ+W
Sbjct: 14 KNYDSIMKILLIGDSGVGKSCLLVRFVDDKFNPSFITTIGIDFKIKTVEINGRKIKLQLW 73
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+EK+F NI +W + + EHAN+D + +++G
Sbjct: 74 DTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQWFKTVTEHANDDAQLLLVGNK 133
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D M +T+E+
Sbjct: 134 SD---------------------METRTVTHEQ--------------------------- 145
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
G+ ++RE G+ F+E SAK + N+ + F LA I +K
Sbjct: 146 ----GDELSRELGIPFVEASAKNDDNVNEIFFTLAKLIQEK 182
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 97/234 (41%), Positives = 135/234 (57%), Gaps = 51/234 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 42 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 101
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 102 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCD 161
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
N V
Sbjct: 162 L---------------------------------------------------TANKVVSY 170
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
G+A A E G+ FMETSAK N+ AF+ +A I ++ + + + + T+
Sbjct: 171 ETGKAFADEIGIPFMETSAKNATNVXHAFMAMAADIKNRMASQPAMNSARPPTV 224
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 140/249 (56%), Gaps = 53/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+DF FK+LLIGDSGVGK+C+L RF+DD++ T ISTIG+DFKIKT++L GK IKLQIWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI+LVYD T++ SF N+ +W+ ID +A E+V K+++G
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKT- 125
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+ NEK D+
Sbjct: 126 -------------------------DLVNEKVVDS------------------------- 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK--KP 243
++ ++ A YG+ F+ETSAK N+E+ FI +A I ++ + PD V I K
Sbjct: 136 NQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETPKPDEVDIKSKNKT 195
Query: 244 DRGGMAGGC 252
GG C
Sbjct: 196 KSGGKKSFC 204
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 147/252 (58%), Gaps = 56/252 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFLF+LLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 5 YDFLFQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ +F N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQWLQEIDRYACEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V + T K F
Sbjct: 125 LTQKK------------------VVEYTVAKDF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTI---DK 241
A + + F+ETSAK + N+E+AF+ +A I D+T G P+ A ++ T+
Sbjct: 140 ------ADQLSIPFLETSAKNSTNVEQAFLTMAKQIKDRT-GSAPVNATSNKATLKVGSS 192
Query: 242 KPDRGGMAGGCC 253
+ + + GCC
Sbjct: 193 QNVQQPQSSGCC 204
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 186 bits (473), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 143/249 (57%), Gaps = 55/249 (22%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS-- 118
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
D+T +K DN
Sbjct: 119 ------------------------DLTTKKVVDNT------------------------- 129
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKPD 244
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 130 TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTPV 188
Query: 245 RGGMAGGCC 253
+ GGCC
Sbjct: 189 KPA-GGGCC 196
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LL+GDSGVGK+C+L RF +D F+ +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W +++HAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQWFSTVNQHANDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D +D A V
Sbjct: 135 SD------------------------------------------MDTRA----------V 142
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E SAK + N+ F LA I +K
Sbjct: 143 STDQGEALAKELGIPFVEASAKDDTNVNDIFFLLAKLIQEK 183
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + T + +GI
Sbjct: 125 LADKRAVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK +N+E+AF+ +A +I D+ + + T+ +
Sbjct: 146 ------------PFMETSAKNALNVEQAFMAMAASIKDRMASQPAANNARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VDQKTSCC 201
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 144/249 (57%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+ F+ETSAK N+E++F+ +A I + ++ + + +
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTK 196
Query: 246 -GGMAGGCC 253
+GGCC
Sbjct: 197 VKQSSGGCC 205
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 137/248 (55%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L+GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + +GI
Sbjct: 125 LVENKVVDTQTAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +IN+E+AF+ +A I K G P + T+ K
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTMAAEI-KKKMGSQPTGSKSAETVQMKGQP 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 IPQKSNCC 200
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 143/251 (56%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +W+ ID +AN+ V KM++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYANDKVNKMLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K F
Sbjct: 125 LTAKK------------------VVDYNTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + G+ F+ETSAK + N+E+AFI +A I + + + P AP +
Sbjct: 140 ------ADQLGIPFLETSAKDSTNVEQAFITMAAEIKARMA-QAP--APKSGGQSIQVGA 190
Query: 246 GGMAG---GCC 253
G G GCC
Sbjct: 191 GAAVGEKKGCC 201
>gi|219127381|ref|XP_002183915.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404638|gb|EEC44584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 207
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 145/249 (58%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD KLL+IGDSGVGKTC+L R+++D+F+ TFI+TIGIDFKIK VD++G +IKLQIWDT
Sbjct: 10 YDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVDVEGTRIKLQIWDT 69
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITTSY+RGA GI+LVYD+T+ +SF++I W+ I +HA+ V K+++G D
Sbjct: 70 AGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCD 129
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ML D +VV++
Sbjct: 130 ---------------------ML--------------------------DEKVVST---- 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+ +A E+G+ F E SAK +I++E +F+ +A A+ D+ + ++ KP++
Sbjct: 139 EEGQKLASEFGIPFFECSAKNDIHVESSFMHIAKAVKDRLKADGQGGPSAKTGLNLKPNQ 198
Query: 246 -GGMAGGCC 253
GG CC
Sbjct: 199 SGGKDKKCC 207
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 142/250 (56%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ YD E
Sbjct: 125 LTANR----------------AVSYDTAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLE--APDRVTIDKKP 243
A + G+ FMETSAK N+E+AF+ ++ +I ++ + + P V I +P
Sbjct: 139 -----FADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQPSANNGRPPTVQIRGQP 193
Query: 244 DRGGMAGGCC 253
G GCC
Sbjct: 194 --VGPKSGCC 201
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 141/250 (56%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKL LIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ K IKLQIWDT
Sbjct: 5 YDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGSKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ YD E
Sbjct: 125 LTANR----------------AVSYDTAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLE--APDRVTIDKKP 243
A + G+ FMETSAK N+E+AF+ ++ +I ++ + + P V I +P
Sbjct: 139 -----FADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANNGRPPTVQIRGQP 193
Query: 244 DRGGMAGGCC 253
G GCC
Sbjct: 194 --VGQKSGCC 201
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED + V V K
Sbjct: 125 M-----------------------------------------------EDKKAVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 193
Query: 246 GGMAGGCC 253
G AGGCC
Sbjct: 194 SGSAGGCC 201
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 146/254 (57%), Gaps = 55/254 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+++ D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQ
Sbjct: 41 SQRGSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 100
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL I+ +A+E+V K+++G
Sbjct: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLEEINRYASENVNKLLVG 160
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D+T +K DN
Sbjct: 161 NKS--------------------------DLTTKKVVDN--------------------- 173
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTI 239
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + I
Sbjct: 174 ----PTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKI 228
Query: 240 DKKPDRGGMAGGCC 253
D P + +GGCC
Sbjct: 229 DSTPVKPA-SGGCC 241
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 145/251 (57%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K + + L+
Sbjct: 128 LTTKK------------------VVDYTTAKEYADQLE---------------------- 147
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTID--KK 242
+ F+ETSAK N+E+AF+ +A I ++ G P + V I
Sbjct: 148 -----------IPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSMPQDGKQNVKIQGAST 196
Query: 243 PDRGGMAGGCC 253
P + +GGCC
Sbjct: 197 PVKQS-SGGCC 206
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 142/253 (56%), Gaps = 57/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF N+ WL+ ID +A+ +V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGANGIIIVYDVTDQESFTNVKTWLQEIDRYASTNVSKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTNKK------------------VVDFTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD-----PLEAPDRVTID 240
A + + F+ETSAK N+E+AF+ +A I + G D P R+T
Sbjct: 140 ------ADQLQIPFLETSAKNATNVEQAFMTMAAEI-KRAQGPDNGHVTPGGNTVRITPS 192
Query: 241 KKPDRGGMAGGCC 253
+P + GCC
Sbjct: 193 SQPLQQDKKKGCC 205
>gi|410076036|ref|XP_003955600.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
gi|372462183|emb|CCF56465.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
Length = 206
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF +D F+ +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 6 KNYDSIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKVKLQLW 65
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + +++HAN+D + +++G
Sbjct: 66 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNDHANDDAQLLLVGNK 125
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D T +Y +G
Sbjct: 126 SD------MDTRLVTYEQG----------------------------------------- 138
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
EA+A+E G+ F+E+SAK + N+ + F LA I DK
Sbjct: 139 -----EALAKELGLPFVESSAKDDQNVNEIFFTLARLIQDK 174
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 143/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQER TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKQA-GGGCC 201
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 144/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AG+ERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 196
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 197 VKQS-GGGCC 205
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 145/248 (58%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +WL ID++A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +++ D +
Sbjct: 123 ------------------------CDLTEKQAVD-------------------------Q 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
++ A E G+ F+ETSAK N+E+AF+ +A + + + + T++ K
Sbjct: 134 QMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGNRKANTVEMKGQP 193
Query: 246 GGMAGGCC 253
GGCC
Sbjct: 194 LQQKGGCC 201
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 143/254 (56%), Gaps = 63/254 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYY GA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFQTITSSYYLGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK------TSGRDPLEAPDRVTI 239
+ A G+ F+ETSAK N+E+AF+ +A I + + G P + I
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMWPGAASGGERP-----NLKI 188
Query: 240 DKKPDRGGMAGGCC 253
D P + GGCC
Sbjct: 189 DSTPVKPA-GGGCC 201
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+ +L RF+DD++ ++ISTIG+DFKI+TVD GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ T T + +GI
Sbjct: 125 LTAQKVVSTETAQAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A +I ++ + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKSGCC 201
>gi|395507068|ref|XP_003757850.1| PREDICTED: ras-related protein Rab-10 [Sarcophilus harrisii]
Length = 190
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/255 (46%), Positives = 142/255 (55%), Gaps = 67/255 (26%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIW E + GA+ +T+ KS+ +R++ EHANEDVE+M+L
Sbjct: 61 QIWTAKKTEPIGSQIGERESGAIS----QRVTSCKSY------VRSLYEHANEDVERMLL 110
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV+
Sbjct: 111 GNKCDM-----------------------------------------------EDKRVVS 123
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IA+E+G+RF+ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 124 ----KAKGEQIAKEHGIRFLETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 175
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 176 ISSGGGVTGWKSKCC 190
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 118/156 (75%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
+ T Y G +GI + T+ KS N+
Sbjct: 128 LTAKRAVETQAAQDYAGQLGIPFLE--TSAKSSTNV 161
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 23/146 (15%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+ VN +
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACEN---VNKLLV 122
Query: 185 KHRGEAIAR-------------EYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
++ + A+ + G+ F+ETSAK++ N+E+AF+ +A+ I + P+
Sbjct: 123 GNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG---PV 179
Query: 232 E----APDRVTIDKKPDRGGMAGGCC 253
+ AP +P + + GCC
Sbjct: 180 QGAGGAPGVRITGSQPVQDKKSSGCC 205
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 128 LTTKK------------------VVDYTTAKEFADSL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+ F+ETSAK N+E++F+ +A I + ++ + + R
Sbjct: 147 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKFRALR 196
Query: 246 GGMAGGCC 253
+ CC
Sbjct: 197 SAVKWRCC 204
>gi|325179736|emb|CCA14139.1| Rab8 family GTPase putative [Albugo laibachii Nc14]
Length = 219
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 141/250 (56%), Gaps = 57/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D KLL+IGDSGVGKTC+L R+++D+F+ TFI+TIGIDFKIK ++L GKKIKLQIWDT
Sbjct: 25 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNIELDGKKIKLQIWDT 84
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITTSY+RGA GI+LVYD+T+ SF +I W+ I +HA+ V K+++G D
Sbjct: 85 AGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRNWVGQIQQHADVHVNKILIGNKCD 144
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +V+++
Sbjct: 145 MM-----------------------------------------------DDKVIST---- 153
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK--P 243
G+A+A EYGVRF ETSAK NIN+E FI++A + ++ + + + K P
Sbjct: 154 EEGQALADEYGVRFYETSAKNNINVEGGFIDIAREVKNRLMEEGGSHKKESINLSAKAIP 213
Query: 244 DRGGMAGGCC 253
+ GCC
Sbjct: 214 PK----KGCC 219
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 118/156 (75%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+V K+++G D
Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
+ T Y G +GI + T+ KS N+
Sbjct: 127 LTAKRAVETQAAQDYAGQLGIPFLE--TSAKSSTNV 160
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 23/146 (15%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+ VN +
Sbjct: 65 DTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACEN---VNKLLV 121
Query: 185 KHRGEAIAR-------------EYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
++ + A+ + G+ F+ETSAK++ N+E+AF+ +A+ I + P+
Sbjct: 122 GNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG---PV 178
Query: 232 E----APDRVTIDKKPDRGGMAGGCC 253
+ AP +P + +GGCC
Sbjct: 179 QGAGGAPGVRITGSQPVQDKKSGGCC 204
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A I ++ + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAADIKNRMASQPAANNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKSGCC 201
>gi|363755488|ref|XP_003647959.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891995|gb|AET41142.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 213
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 52/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LL+GDSGVGK+C+L RF +D F+ +FI+TIGIDFKIKTVD+ GKKIKLQ+W
Sbjct: 15 KGYDSIMKVLLVGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDIDGKKIKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F+NI +W +++HA ED + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQWFSTVNQHATEDAQILLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
KD +D A V
Sbjct: 135 KD------------------------------------------MDTRA----------V 142
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GE++A+E GV F+E SAK + N+ F LA I +K
Sbjct: 143 TYEQGESLAKELGVPFIEASAKDDENVSDIFFTLAKIIQEK 183
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
FMETSAK N+E+AF+ +A I ++ + + A P V I +P
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 193 -VNQKSGCC 200
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/257 (39%), Positives = 146/257 (56%), Gaps = 65/257 (25%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A E V K+++G
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYACEGVNKLLVGNKS- 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+TN+K + E+A
Sbjct: 127 -------------------------DLTNKK-----------VVEYAT------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---------TSGRDPLEAPDR 236
+ A + + F+ETSAK+ N+E+AF+ +A I D+ G+ L+
Sbjct: 139 --AKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQAGGKSTLKVGAG 196
Query: 237 VTIDKKPDRGGMAGGCC 253
+ ++ AGGCC
Sbjct: 197 QNVSQQS-----AGGCC 208
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 141/250 (56%), Gaps = 57/250 (22%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 68
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 128
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+ + T + MGI
Sbjct: 129 TANKVVSSETAKAFADEMGI---------------------------------------- 148
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA---PDRVTIDKKP 243
FMETSAK N+E+AF+ +A +I D+ + + P A P V I +P
Sbjct: 149 -----------PFMETSAKNATNVEQAFMAMAASIKDRMASQ-PAAANARPPTVQIRGQP 196
Query: 244 DRGGMAGGCC 253
CC
Sbjct: 197 --VNQKTSCC 204
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
FMETSAK N+E+AF+ +A I ++ + + A P V I +P
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNNARPPTVQIRGQP- 192
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 193 -VNQKAGCC 200
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 118/156 (75%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
+ T Y G +GI + T+ KS N+
Sbjct: 128 LTAKRAVETQAAQDYAGQLGIPFLE--TSAKSSTNV 161
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 23/146 (15%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+ VN +
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACEN---VNKLLV 122
Query: 185 KHRGEAIAR-------------EYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
++ + A+ + G+ F+ETSAK++ N+E+AF+ +A+ I + P+
Sbjct: 123 GNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG---PV 179
Query: 232 E----APDRVTIDKKPDRGGMAGGCC 253
+ AP +P + +GGCC
Sbjct: 180 QGAGGAPGVRITGSQPVQDKKSGGCC 205
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 143/253 (56%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD ++ ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + +VV+ K
Sbjct: 125 LSTK-----------------------------------------------KVVDYAAAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD------RVTI 239
E + G+ F+ETSAK N+E+AF+ +A I ++ P AP +
Sbjct: 138 EYAEQL----GIPFLETSAKNATNVEQAFMTMAAEIKNRMG---PPSAPSDGVGGININS 190
Query: 240 DKKPDRGGMAGGC 252
+P +G C
Sbjct: 191 SSRPVEQSKSGCC 203
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 142/251 (56%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 MA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ G + ++ P +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERM-GSSIATNNTKANVNVAPGQ 192
Query: 246 GGMA---GGCC 253
G + GCC
Sbjct: 193 GVSSNNNNGCC 203
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 146/250 (58%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K + + L+
Sbjct: 128 LTTKK------------------VVDYTTAKEYADQLE---------------------- 147
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPL-EAPDRVTIDKKP 243
+ F+ETSAK N+E+AF+ +A I ++ G P + D++ P
Sbjct: 148 -----------IPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVPSGSSHDKINPSTTP 196
Query: 244 DRGGMAGGCC 253
+ GCC
Sbjct: 197 VKPS-GSGCC 205
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 145/255 (56%), Gaps = 58/255 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 4 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 63
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL ID +A ++V K+++G D
Sbjct: 64 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKSD 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
HT V D T K +
Sbjct: 124 ------LHT------------KKVVDYTTAKEY--------------------------- 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK----TSGRDPLEAPDRVTIDK 241
A + G+ F+ETSAK +N+E+AF+ +A I + +SG + ++
Sbjct: 139 ------ADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPPSSGASDQTSKLKIDQGH 192
Query: 242 KPDRGGMAG---GCC 253
D G+ G GCC
Sbjct: 193 NIDTSGIQGSKSGCC 207
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ T T + +GI
Sbjct: 125 LTSQKVVSTETAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK N+E+AF+ + AI + + + P T+ +
Sbjct: 146 ------------PFLETSAKNATNVEEAFMAMTAAIKTRMASQ-PAGGSKPSTVQIRGQP 192
Query: 246 GGMAGGCC 253
GCC
Sbjct: 193 VNQQSGCC 200
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 140/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD+F T+ISTIG+DFKI+TVDL GK +KLQIWDT
Sbjct: 7 YDYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+NI +WL ID +A+++V K+++G D
Sbjct: 67 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQWLSEIDRYASDNVCKLLVGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + ++GI
Sbjct: 127 LVDSKVVETEKAKAFADSLGI--------------------------------------- 147
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +IN+E+AF+ +++ I + + + +E V + K
Sbjct: 148 ------------PFIETSAKESINVEEAFLTMSSEIKKRMATQPTVERRPTVHVHMKGQP 195
Query: 246 GGMAGGCC 253
CC
Sbjct: 196 IQQKSSCC 203
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 142/255 (55%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 24 MHASEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 83
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 84 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQWLQEIDRYASEGVNKLLV 143
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 144 GNKS--------------------------DLTSKK---------------------VVE 156
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVT 238
V K A + G+ F+ETSAK N+E+AF+ +A I DK SG +
Sbjct: 157 YTVAKE----FADQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGASGTGGPTSKTNTI 212
Query: 239 IDKKPDRGGMAGGCC 253
+ GCC
Sbjct: 213 TPGTGITTNTSSGCC 227
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 144/249 (57%), Gaps = 54/249 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ V D T K F + L
Sbjct: 121 TTKK------------------VVDYTTAKEFADSL------------------------ 138
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKPD 244
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 139 ---------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPV 189
Query: 245 RGGMAGGCC 253
+ +GGCC
Sbjct: 190 KQS-SGGCC 197
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL ID +A+++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASDNVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K V
Sbjct: 123 ------------------------CDLTDKKV-------------------------VSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+A A E G+ FMETS K +N+ +AF+ ++ +I D+ + + T+ +
Sbjct: 134 ETAKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKDRMASQPAANNARPATVQIRGQP 193
Query: 246 GGMAGGCC 253
G CC
Sbjct: 194 VEQKGSCC 201
>gi|12084567|pdb|1G17|A Chain A, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
gi|12084568|pdb|1G17|B Chain B, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
Length = 170
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 134/218 (61%), Gaps = 52/218 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQIWDTA
Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TITT+YYRGAMGI+LVYDIT+E++F NI +W + ++EHAN++ + +++G D
Sbjct: 61 GQERFRTITTAYYRGAMGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+ +VV +
Sbjct: 121 ------------------------------------------------ETRVVTA----D 128
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 129 QGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 166
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 144/248 (58%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +WL ID++A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A + +VV+ + K
Sbjct: 125 MA-----------------------------------------------EKRVVDQQMAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+ A E G+ F+ETSAK N+E+AFI +A + + + + T++ K
Sbjct: 138 ----SFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQLTEGNRKTNTVEMKGQP 193
Query: 246 GGMAGGCC 253
G CC
Sbjct: 194 LQQKGSCC 201
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 139/249 (55%), Gaps = 54/249 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+ +SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ T T + +GI
Sbjct: 125 LTSQKVVSTETAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKPD 244
F+ETSAK N+E+AF+ + AI + + + A P V I +P
Sbjct: 146 ------------PFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPTVQIRGQPV 193
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 194 N--QQSGCC 200
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 143/250 (57%), Gaps = 54/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQ WDT
Sbjct: 56 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQRWDT 115
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 116 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 175
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 176 LTTKK------------------VVDYTTAKEFADSL----------------------- 194
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 195 ----------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTP 244
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 245 VKQS-GGGCC 253
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 144/255 (56%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M + YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MNPEYYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID A E V +++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRFAVEGVNCLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D D +VV
Sbjct: 121 GNKCDIT-----------------------------------------------DKKVVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K + + G+ F+ETSAK + N+E+AF+ +A I ++ S A + T+
Sbjct: 134 YTVAKEFADGL----GIPFLETSAKDSTNVEQAFLTMARQIKERMSNSTLNTASSKTTVK 189
Query: 241 --KKPDRGGMAGGCC 253
+ + + GCC
Sbjct: 190 VGQGTNVSQSSSGCC 204
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 148/252 (58%), Gaps = 59/252 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDTA
Sbjct: 44 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 103
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T++++F+N+ +WL+ ID A+E V K+++G D
Sbjct: 104 GQERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKQWLQEIDRFASEGVHKLLVGNKSDL 163
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
E +VV++ K
Sbjct: 164 -----------------------------------------------ETKKVVDA---KT 173
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTIDK 241
GE A + G+ F+ETSAK N+E+AF+ +A I DK ++ + +A +V
Sbjct: 174 AGE-FATQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGAASSAQSNQAKANIKVGQAV 232
Query: 242 KPDRGGMAGGCC 253
P + + GCC
Sbjct: 233 APQQ---SSGCC 241
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 143/249 (57%), Gaps = 54/249 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 62 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 121
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ V D T K F + L
Sbjct: 122 TTKK------------------VVDYTTAKEFADSL------------------------ 139
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKPD 244
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 140 ---------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPV 190
Query: 245 RGGMAGGCC 253
+ GGCC
Sbjct: 191 KQS-GGGCC 198
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 139/249 (55%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 MA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+++ G+ F+ETSAK N+E+AF+ +A I ++ V + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNEKRSVQVGPGQNV 193
Query: 245 RGGMAGGCC 253
+GGCC
Sbjct: 194 SSSPSGGCC 202
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 140/252 (55%), Gaps = 55/252 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIW
Sbjct: 3 QEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + T + +GI
Sbjct: 123 CDLTANKVVSYETAKAFADEIGI------------------------------------- 145
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLE--APDRVTIDK 241
FMETSAK N+E+AF+ +A I + + + + P V +
Sbjct: 146 --------------PFMETSAKNATNVEQAFMAMAADIKTRMASQPAMNNARPPSVQLQG 191
Query: 242 KPDRGGMAGGCC 253
+P GCC
Sbjct: 192 QP--VNQKSGCC 201
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 65/257 (25%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A E V K+++G
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNKS- 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+TN+K + E+A
Sbjct: 127 -------------------------DLTNKK-----------VVEYAT------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---------TSGRDPLEAPDR 236
+ A + + F+ETSAK+ N+E+AF+ +A I D+ G+ L+
Sbjct: 139 --AKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQAGGKSTLKVGAG 196
Query: 237 VTIDKKPDRGGMAGGCC 253
+ ++ + GGCC
Sbjct: 197 QNVSQQSN-----GGCC 208
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 139/249 (55%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D KLL+IGD+GVGKTC+L R+++D+F+ TFI+TIGIDFKIK +DL K+IKLQIWDT
Sbjct: 8 FDMQIKLLMIGDTGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITTSY+RGA GI+LVYD+T++KSF++I W+ I +HA+ V K+++G D
Sbjct: 68 AGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNKILIGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ED + V K
Sbjct: 128 M----------------------------------------------DEDRE-----VSK 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-TSGRDPLEAPDRVTIDKKPD 244
G +A EYG++F ETSAK +IN+EK FI +A + D+ + T+D
Sbjct: 137 EEGANLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMADGPGGGGGHGRTVDINGQ 196
Query: 245 RGGMAGGCC 253
GCC
Sbjct: 197 ASKKKTGCC 205
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 140/249 (56%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ +F+N+ W ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVKTWFHEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV V K
Sbjct: 125 IT-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG-RDPLEAPDRVTIDKKPD 244
+++ G+ F+ETSAK N+E+AF+ +A I ++ G + A V + +
Sbjct: 138 EFADSL----GIPFLETSAKNATNVEQAFLTMARQIKERMGGAAENTAAKANVNLRGQNV 193
Query: 245 RGGMAGGCC 253
G + CC
Sbjct: 194 SQGSSSSCC 202
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 135/219 (61%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K + + L
Sbjct: 128 LTTKK------------------VVDYTTAKEYTDQL----------------------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
G+ F+ETSAK N+E+AF+ +A I ++
Sbjct: 147 ----------GIPFLETSAKNATNVEQAFMTMAAEIKNR 175
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 144/251 (57%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNE-KSFDNILKWLRNIDEHANEDVEKMILGKTK 124
AGQERF TIT+SYYRGA GI++VYD+T++ +S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQGESYANVKQWLQEIDRYASENVNKLLVGNKS 124
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D+T +K DN
Sbjct: 125 --------------------------DLTTKKVVDNT----------------------- 135
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKK 242
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID
Sbjct: 136 --TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDST 192
Query: 243 PDRGGMAGGCC 253
P + GGCC
Sbjct: 193 PVKPA-GGGCC 202
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 137/247 (55%), Gaps = 51/247 (20%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+ T + +GI
Sbjct: 121 TANKVVSYETAKAFADEIGI---------------------------------------- 140
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDRG 246
FMETSAK N+E+AF+ +A I ++ + + + T+ +
Sbjct: 141 -----------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTARPPTVQIRGQPV 189
Query: 247 GMAGGCC 253
GCC
Sbjct: 190 NQKSGCC 196
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 146/257 (56%), Gaps = 65/257 (25%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A E V K+++G
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQWLQEIDRYACEGVNKLLVGNKS- 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+TN+K + E+A
Sbjct: 127 -------------------------DLTNKK-----------VVEYAT------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---------TSGRDPLEAPDR 236
+ A + + F+ETSAK+ N+E+AF+ +A I D+ G+ L+
Sbjct: 139 --AKDFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQAGGKSTLKVGQG 196
Query: 237 VTIDKKPDRGGMAGGCC 253
+ ++ + GGCC
Sbjct: 197 QNVSQQSN-----GGCC 208
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 142/249 (57%), Gaps = 54/249 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ V D T K F
Sbjct: 129 TTKK------------------VVDYTTAKEF---------------------------- 142
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKPD 244
A G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 143 -----ADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPV 197
Query: 245 RGGMAGGCC 253
+ GGCC
Sbjct: 198 KQS-GGGCC 205
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 143/249 (57%), Gaps = 54/249 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ V D T K F + L
Sbjct: 121 TTKK------------------VVDYTTAKEFADSL------------------------ 138
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKPD 244
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 139 ---------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPV 189
Query: 245 RGGMAGGCC 253
+ GGCC
Sbjct: 190 KQS-GGGCC 197
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 139/251 (55%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ V + P
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGSTTANNTKPSVQVG--PGH 191
Query: 246 G---GMAGGCC 253
G GGCC
Sbjct: 192 GVSSNSGGGCC 202
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 144/249 (57%), Gaps = 54/249 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 133 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 192
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 193 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 252
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ V D T K F + L
Sbjct: 253 TTKK------------------VVDYTTAKEFADSL------------------------ 270
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKPD 244
G+ F+ETSAK N+E++F+ +A I + ++ V I P
Sbjct: 271 ---------GIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPV 321
Query: 245 RGGMAGGCC 253
+ +GGCC
Sbjct: 322 KQS-SGGCC 329
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 138/251 (54%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T++ SF+N+ +WL ID +A ++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQWLEEIDRYACDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T Y +GI
Sbjct: 125 LTTKKVVDYTTAKEYADQLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD---RVTIDKK 242
F+ETSAK N+E+AF+ +A I ++ P A D +V ID+
Sbjct: 146 ------------PFLETSAKNASNVEQAFMTMAAEIKNRVG--PPSSAADQASKVKIDQG 191
Query: 243 PDRGGMAGGCC 253
GCC
Sbjct: 192 RPIETTKSGCC 202
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 139/248 (56%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI +
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFM------------------------------------ 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
ETSAK+ N+E+AF+ +A I ++ + + P+ T+ +
Sbjct: 149 ---------------ETSAKSATNVEQAFMAMAAEIKNRMATQ-PMNNARPPTVQIRGQP 192
Query: 246 GGMAGGCC 253
GCC
Sbjct: 193 VNQKSGCC 200
>gi|327290399|ref|XP_003229910.1| PREDICTED: ras-related protein Rab-10-like, partial [Anolis
carolinensis]
Length = 193
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 118/195 (60%), Gaps = 51/195 (26%)
Query: 30 SDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVY 89
+ F+ I IDFKIKTV+L+GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVY
Sbjct: 50 QESQFSPKCIKDRCIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVY 109
Query: 90 DITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGAMGIMLV 149
DITN KSF+NI KWLRNIDEHANEDVE+M+LG D
Sbjct: 110 DITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDM----------------------- 146
Query: 150 YDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETSAKANIN 209
+D +VV K +GE IARE+G+RF ETSAKANIN
Sbjct: 147 ------------------------DDKRVVP----KAKGEQIAREHGIRFFETSAKANIN 178
Query: 210 IEKAFIELATAIYDK 224
IEKAF+ LA I K
Sbjct: 179 IEKAFLTLAEDILRK 193
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/251 (39%), Positives = 141/251 (56%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 41 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDT 100
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ +F N+ +WL ID +A E V K+++G D
Sbjct: 101 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQWLHEIDRYACEGVNKLLVGNKSD 160
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V + T K F
Sbjct: 161 LTQKK------------------VVEYTVAKDF--------------------------- 175
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A + + F+ETSAK+ N+E+AF+ +A I D+T ++ T+ +
Sbjct: 176 ------ADQLTIPFLETSAKSATNVEQAFLTMAKQIKDRTGSTTVNTGSNKATLKVGAGQ 229
Query: 246 G---GMAGGCC 253
+ GCC
Sbjct: 230 NVQQQQSSGCC 240
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 138/251 (54%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + ++GI
Sbjct: 125 LTAKRVVSTDAAKEFAESLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI---DKK 242
F+ETSAK N+EKAF+ +A I K P+ V + +
Sbjct: 146 ------------EFLETSAKNAANVEKAFMMMAAQI-KKRMANAPVAPKAGVKLTPGQQV 192
Query: 243 PDRGGMAGGCC 253
P GG CC
Sbjct: 193 PSNGG--SKCC 201
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 137/247 (55%), Gaps = 51/247 (20%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 69
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 129
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+ T + +GI
Sbjct: 130 TANKVVSYETAKAFADEIGI---------------------------------------- 149
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDRG 246
FMETSAK N+E+AF+ +A I ++ + + + T+ +
Sbjct: 150 -----------PFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTARPPTVQIRGQPV 198
Query: 247 GMAGGCC 253
GCC
Sbjct: 199 NQKSGCC 205
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/249 (39%), Positives = 138/249 (55%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + Y +GI +
Sbjct: 125 LTSKRAVEYNSAKEYADQLGIPFL------------------------------------ 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI-DKKPD 244
ETSAK++ N+E+AF+ +A I ++ V I +P
Sbjct: 149 ---------------ETSAKSSTNVEQAFLTMAAEIKNRMGPVQQAGTGPSVRIGGSQPV 193
Query: 245 RGGMAGGCC 253
GGCC
Sbjct: 194 NEKKTGGCC 202
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 143/253 (56%), Gaps = 58/253 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A+E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLQEIDRYASETVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDFTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR------VTI 239
A + + F+ETSAK N+E+AF+ +A I ++ P + + T
Sbjct: 140 ------ADQLSIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVFPAKEKGQSINIGGSTT 193
Query: 240 DKKPDRGGMAGGC 252
KP +GG GC
Sbjct: 194 IAKP-QGGSDCGC 205
>gi|384490321|gb|EIE81543.1| GTP-binding protein ypt2 [Rhizopus delemar RA 99-880]
Length = 158
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/199 (48%), Positives = 125/199 (62%), Gaps = 51/199 (25%)
Query: 20 VGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYY 79
VGK+C+L RFSDD+F +FI+TIGIDFKI+T++L GK+IKLQIWDTAGQERF TITT+YY
Sbjct: 5 VGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYY 64
Query: 80 RGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSY 139
RGAMGI+LVYD T+EKSF N+ W NI++HA+E V K+++G D
Sbjct: 65 RGAMGILLVYDTTDEKSFGNVRNWFSNIEQHASEGVNKILIGNKCDM------------- 111
Query: 140 YRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRF 199
ED +V++ K +GEA+A E G++F
Sbjct: 112 ----------------------------------EDKRVIS----KEQGEALASELGIQF 133
Query: 200 METSAKANINIEKAFIELA 218
METSAKANI +E+AF +LA
Sbjct: 134 METSAKANIGVEEAFFDLA 152
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 137/252 (54%), Gaps = 56/252 (22%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A YD KLL+IGDS VGKT +L R+++D F++TFI+TIGIDFKIKT++L GK++KLQ
Sbjct: 3 AHGPYDLQIKLLMIGDSAVGKTSLLLRYANDTFSSTFITTIGIDFKIKTINLDGKRVKLQ 62
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQE+F TIT SY+RGA GI+LVYDIT+ +F+++ W+ I+EHA+ V K+++G
Sbjct: 63 IWDTAGQEQFRTITRSYFRGAQGIVLVYDITDRGTFNSVRSWMAQINEHADGQVNKILVG 122
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D + +
Sbjct: 123 NKCDNSSARK-------------------------------------------------- 132
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
V G +A EYGVRF+ETSAK N+N+ +AF AI + + R P A V +
Sbjct: 133 -VSADEGRKLADEYGVRFIETSAKQNVNVTEAF----RAIAQQVTSRIPSRAAGGVKLQS 187
Query: 242 KPDRGGMAGGCC 253
GG GCC
Sbjct: 188 AAKPGGKK-GCC 198
>gi|414867230|tpg|DAA45787.1| TPA: hypothetical protein ZEAMMB73_964234 [Zea mays]
Length = 320
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 133/224 (59%), Gaps = 52/224 (23%)
Query: 19 GVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSY 78
GVGK+C+L RFSD +F T+FI+TIGIDFKI+TV+L GK+IKLQIWDTAGQERF TITT+Y
Sbjct: 131 GVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQERFRTITTAY 190
Query: 79 YRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTS 138
Y GAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 191 YSGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKVD------------- 237
Query: 139 YYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVR 198
+DE P +G+A+A EYG++
Sbjct: 238 -----------------------------MDESKRAVP--------TSKGQALADEYGIK 260
Query: 199 FMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK 242
F ETSAK N+N+E+ F +A I + S D P+ TI K
Sbjct: 261 FFETSAKTNLNVEQVFFSIARDIKQRLSETD--SKPEDRTIKIK 302
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FMETSAK N+E+AF+ +A I ++ + + T+ +
Sbjct: 146 ------------PFMETSAKNATNVEEAFMAMAADIKNRMASQPAANNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKSGCC 201
>gi|1370192|emb|CAA98173.1| RAB8B [Lotus japonicus]
Length = 187
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 136/236 (57%), Gaps = 57/236 (24%)
Query: 24 CVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAM 83
C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDTAGQERF TITT+YYRGAM
Sbjct: 1 CLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAM 60
Query: 84 GIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTAGQERFHTITTSYYRGA 143
GI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 61 GILLVYDVTDESSFNNIKNWIRNIEQHASDNVNKILVGNKAD------------------ 102
Query: 144 MGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKHRGEAIAREYGVRFMETS 203
+DE P +G+A+A EYG++F ETS
Sbjct: 103 ------------------------MDESKRAVP--------TSKGQALADEYGIKFFETS 130
Query: 204 AKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDRGGMAG------GCC 253
AK N+N+++ F +A I + + D P + I+ +PD+G + CC
Sbjct: 131 AKTNLNVDEVFFSIARDIKQRVADNDSKAEPQTLKIN-QPDQGAGSAQAAPKSACC 185
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 144/255 (56%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 121 GNKS--------------------------DLTSKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPDRVTI 239
V K A + + F+ETSAK N+E+AF+ +A I D+ S P TI
Sbjct: 134 YSVAKE----FADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSGTGKSSTI 189
Query: 240 DK-KPDRGGMAGGCC 253
+ + A GCC
Sbjct: 190 TPGQTVQQQQASGCC 204
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 140/251 (55%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + Y +GI +
Sbjct: 128 LTTKKVVDHTTAAEYAHQLGIPFL------------------------------------ 151
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD---RVTIDKK 242
ETSAK+ N+E+AF+ +A I ++ P A D +V ID+
Sbjct: 152 ---------------ETSAKSATNVEQAFMTMAAEIKNRVG--PPSSATDNASKVKIDQG 194
Query: 243 PDRGGMAGGCC 253
GCC
Sbjct: 195 RPVENTKSGCC 205
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 138/250 (55%), Gaps = 56/250 (22%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF N+ +WL+ ID +A+E+V K+++G D
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQWLQEIDRYASENVNKLLVGNKSDM 128
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ T Y +GI
Sbjct: 129 ETKKVVDYTTAKEYADQLGI---------------------------------------- 148
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTS---GRDPLEAPDRVTIDKKP 243
F+ETSAK N+E+AF+ +A I ++ P P P
Sbjct: 149 -----------PFLETSAKNATNVEQAFMTMAAEIKNRMGPVISASPDNKPSVKINASNP 197
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 198 VK--QSGGCC 205
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+ A G+ F+ETSAK N+E+AF+ +A I
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 133/216 (61%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 13 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 72
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 73 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 132
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 133 LTTKK------------------VVDYTTAKEFADSL----------------------- 151
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
G+ F+ETSAK N+E++F+ +A I
Sbjct: 152 ----------GIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 140/251 (55%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + Y +GI +
Sbjct: 128 LTTKKVVDHTTAAEYAHQLGIPFL------------------------------------ 151
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD---RVTIDKK 242
ETSAK+ N+E+AF+ +A I ++ P A D +V ID+
Sbjct: 152 ---------------ETSAKSATNVEQAFMTMAAEIKNRVG--PPSSATDNASKVKIDQG 194
Query: 243 PDRGGMAGGCC 253
GCC
Sbjct: 195 RPVENTRSGCC 205
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 136/248 (54%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
T + +GI
Sbjct: 125 LNDNRAVSYDTAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FME SAK+ N+E+AF+ +A I ++ + + T+ +
Sbjct: 146 ------------PFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNAKPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKSGCC 201
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 136/248 (54%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
T + +GI
Sbjct: 125 LNDNRAVSYDTAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
FME SAK+ N+E+AF+ +A I ++ + + T+ +
Sbjct: 146 ------------PFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNAKPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQKNGCC 201
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 133/224 (59%), Gaps = 51/224 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHASEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT SYYRGA GI++VYD+T+ +F N+ +WL+ ID A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITASYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRFASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+TN+K VV
Sbjct: 121 GNKS--------------------------DLTNKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V K A + G+ F+ETSAK N+E+AF+ +A I D+
Sbjct: 134 YTVAKE----FADQLGIPFLETSAKNATNVEQAFLTMAKQIKDR 173
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 51/234 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ T+ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +A++ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV++
Sbjct: 125 LV-----------------------------------------------DSKVVDT---- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
+A A G+ F+ETSAK +IN+E+AF+ +++ I + + + +E V I
Sbjct: 134 EEAKAFAESLGISFLETSAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHI 187
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 100/250 (40%), Positives = 142/250 (56%), Gaps = 56/250 (22%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+ +L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 35 DYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 94
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +A E+V K+++G D
Sbjct: 95 GQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYAAENVNKLLVGNKCDL 154
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
G+ +TT
Sbjct: 155 EGK---RVVTT------------------------------------------------E 163
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD---PLEAPDRVTIDKKP 243
+G+ A G+ F+ETSAK + N+E+AF+ +A+ I + + P P ++
Sbjct: 164 QGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAAPATKPGVNLRSQQV 223
Query: 244 DRGGMAGGCC 253
+ G GGCC
Sbjct: 224 KKEG--GGCC 231
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQER TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 128 LTTKK------------------VVDYTTAKEF--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A G+ F+ETSAK N+E++F+ +A I
Sbjct: 143 ------ADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>gi|444730947|gb|ELW71316.1| Ras-related protein Rab-8B [Tupaia chinensis]
Length = 353
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 125/209 (59%), Gaps = 61/209 (29%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIG +G
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIG----------EGGAEARDEG 52
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 53 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 112
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 113 CDM----------------------------------------------NDKRQ-----V 121
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEK 212
K RGE +A +YG++F+ETSAK++ N+E+
Sbjct: 122 SKERGEKLAIDYGIKFLETSAKSSTNVEE 150
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 142/253 (56%), Gaps = 59/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T++++F+N+ +WL ID +A ++V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
HT V D T K +
Sbjct: 128 ------LHT------------KKVVDYTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI-----YDKTSGRDPLEAPDRVTID 240
A + G+ F+ETSAK +N+E+AF+ +A I + DP ++V I+
Sbjct: 143 ------ADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP---ANKVKIE 193
Query: 241 KKPDRGGMAGGCC 253
GCC
Sbjct: 194 HGRPIESSKSGCC 206
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 145/252 (57%), Gaps = 58/252 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +WL ID++A++ V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDSVSKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T ++ D +
Sbjct: 123 ------------------------CDMTEKRVVD-------------------------Q 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK--- 242
++ A E G+ F+ETSAK N+E+AF+ +A + + + + TI+ K
Sbjct: 134 QMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGNRKANTIEMKGQP 193
Query: 243 -PDRGGMAGGCC 253
P RG G CC
Sbjct: 194 LPQRG---GSCC 202
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 136/248 (54%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A++ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDSVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T + +GI +
Sbjct: 125 LAANRAVPYETAKAFADEIGIPFM------------------------------------ 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
ETSAK N+E+AF+ +A +I D+ + + T+ +
Sbjct: 149 ---------------ETSAKDATNVEQAFMAMAASIKDRMASQPAANNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VPQKNGCC 201
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/245 (42%), Positives = 143/245 (58%), Gaps = 61/245 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F +H N
Sbjct: 128 LTTKK------------------VVDYTTAKEF----------ADHLN------------ 147
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK--- 242
+ F+ETSAK N+E+AF+ +A I ++ PL P R T +
Sbjct: 148 -----------IPFLETSAKNATNVEQAFMTMAAEIKNRMG---PL--PQRRTYVARGRT 191
Query: 243 --PDR 245
PDR
Sbjct: 192 SHPDR 196
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 132/216 (61%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 22 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 81
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 82 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 141
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 142 LTTKK------------------VVDYTTAKEF--------------------------- 156
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A G+ F+ETSAK N+E++F+ +A I
Sbjct: 157 ------ADSLGIPFLETSAKNATNVEQSFMTMAAEI 186
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 137/248 (55%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+ +SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ T T + +GI
Sbjct: 125 LTSQKVVSTETAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK N+E+AF+ + AI + + + P T+ +
Sbjct: 146 ------------PFLETSAKNATNVEEAFMAMTAAIKTRMASQ-PAGGSKPPTVQIRGQP 192
Query: 246 GGMAGGCC 253
GCC
Sbjct: 193 VNQQSGCC 200
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 144/253 (56%), Gaps = 59/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T++++F+N+ +WL ID +A ++V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
HT V D T K +
Sbjct: 128 ------LHTKK------------VVDYTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGR-DPLEAPDRVTID 240
A + G+ F+ETSAK +N+E+AF+ +A I +SG DP ++V I+
Sbjct: 143 ------ADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGNSDP---ANKVKIE 193
Query: 241 KKPDRGGMAGGCC 253
GCC
Sbjct: 194 HGRPIESSKSGCC 206
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 131/213 (61%), Gaps = 51/213 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+++SF+N+ +WL+ ID +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 128 LTTKK------------------VVDYTTAKEF--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
A + G+ F+ETSAK N+E+AF+ +A
Sbjct: 143 ------ADQLGIPFLETSAKNATNVEQAFMTMA 169
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 144/249 (57%), Gaps = 54/249 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 15 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDTA 74
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 75 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 134
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
++ V D T K +
Sbjct: 135 TTKK------------------VVDYTTAKEY---------------------------- 148
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPL-EAPDRVTIDKKPD 244
A + + F+ETSAK N+E+AF+ +A I ++ G P + D++ P
Sbjct: 149 -----ADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVPSGSSHDKINPSTTPV 203
Query: 245 RGGMAGGCC 253
+ GCC
Sbjct: 204 KPS-GSGCC 211
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNTT----------------------- 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+ A GV F+ETSAK N+E+AF+ +A I
Sbjct: 136 --AKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 132/216 (61%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 62
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 123 LTTKK------------------VVDYTTAKEF--------------------------- 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A G+ F+ETSAK N+E++F+ +A I
Sbjct: 138 ------ADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 135/248 (54%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + +GI
Sbjct: 125 LVENKVVDTETAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +IN+E+AF+ +A I K + A T+ K
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTMAGEIKKKMGNQPNATARSSSTVQMKGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 IQQNSNCC 201
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 139/251 (55%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L K IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + Y +GI +
Sbjct: 128 LTTKKVVDHTTAAEYANQLGIPFL------------------------------------ 151
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD---RVTIDKK 242
ETSAK+ N+E+AF+ +A I ++ P A D +V ID+
Sbjct: 152 ---------------ETSAKSATNVEQAFMTMAAEIKNRVG--PPSSATDNTSKVKIDQG 194
Query: 243 PDRGGMAGGCC 253
GCC
Sbjct: 195 RPVESTKSGCC 205
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 65
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 125 -------------------------DLTTKKVVDNT------------------------ 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+ A G+ F+ETSAK N+E+AF+ +A I
Sbjct: 136 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 144/254 (56%), Gaps = 63/254 (24%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 69
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+E SF ++ +W++ ID +A E V K+++G
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDEDSFQHVKQWMQEIDRYAAEGVNKLLVGNKS-- 127
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
D+T++K+ E ANE
Sbjct: 128 ------------------------DLTDKKAVST---------EQANE------------ 142
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-------TSGRDPLEAPDRVTI 239
A + +ETSAK N+E+AF+ +A I D+ T + ++ ++
Sbjct: 143 ----FAESIKISLLETSAKDATNVEQAFLTMAKQIKDRMGTTMQQTQTKSTVKVGQGASL 198
Query: 240 DKKPDRGGMAGGCC 253
+ K +GGCC
Sbjct: 199 EPKQ-----SGGCC 207
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 65
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 125 -------------------------DLTTKKVVDNT------------------------ 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+ A G+ F+ETSAK N+E+AF+ +A I
Sbjct: 136 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 13 YDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 72
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 73 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 132
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 133 LTTKK------------------VVDYTTAKEF--------------------------- 147
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A G+ F+ETSAK N+E++F+ +A I
Sbjct: 148 ------ADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 142/255 (55%), Gaps = 53/255 (20%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHASEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDMDTFTNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ++ V + K F
Sbjct: 121 GNKSDLTAKK------------------VVEYGAAKEF---------------------- 140
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR-VTI 239
A + + F+ETSAK N+E+AF+ +A I D+ + + VT+
Sbjct: 141 -----------ADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGATSTSQGTGKGVTV 189
Query: 240 DK-KPDRGGMAGGCC 253
+ + GGCC
Sbjct: 190 TAGQSVQQQSGGGCC 204
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 138/248 (55%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLL+IGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLIIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLHEIDRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + +GI
Sbjct: 125 LTENKVVQTQTAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +IN+E+AF+ +A I K G P + ++ K
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTMAAEI-KKKMGSQPSGSKSAESVQMKGQP 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 IPQNNNCC 200
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/248 (38%), Positives = 139/248 (56%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+ GK IKL+IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDNVNKILVGNKAD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
T + +GI
Sbjct: 125 LTANRVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK N+E+AF+ + AI ++ + + + T++ +
Sbjct: 146 ------------PFLETSAKDATNVEQAFMAMTGAIKNRMASQPASNSAKPPTVNIRGQP 193
Query: 246 GGMAGGCC 253
+GGCC
Sbjct: 194 VTQSGGCC 201
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 117/155 (75%), Gaps = 2/155 (1%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+V K+++G D
Sbjct: 65 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDL 124
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
+ T Y G +GI + T+ KS N+
Sbjct: 125 TAKRAVETQAAQDYAGQLGIPFLE--TSAKSSTNV 157
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 90/146 (61%), Gaps = 23/146 (15%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TIT+SYYRGA GI++VYDIT++++F+N+ +WL+ ID +A E+ VN +
Sbjct: 62 DTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACEN---VNKLLV 118
Query: 185 KHRGEAIAR-------------EYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
++ + A+ + G+ F+ETSAK++ N+E+AF+ +A+ I + P+
Sbjct: 119 GNKCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMG---PV 175
Query: 232 E----APDRVTIDKKPDRGGMAGGCC 253
+ AP +P + +GGCC
Sbjct: 176 QGAGGAPGVRITGSQPVQDKKSGGCC 201
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 140/250 (56%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TVDL GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDLDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ +WL +D +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTDLESFNNLKQWLEEVDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 125 EVTKK------------------VVDYTTAKEY--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD--RVTIDKKP 243
A + + F+ETSAK N+E+AF+ +A+ I ++ + +V ID+
Sbjct: 140 ------ADQLNIPFLETSAKNATNVEQAFMTMASEIKNRVGPPSSAAVTESAKVKIDQGR 193
Query: 244 DRGGMAGGCC 253
GCC
Sbjct: 194 TIETNKSGCC 203
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 58/238 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDS VGK+C L RF+DD++ ++ISTIG+DFKI+TV+++GK +KLQIWDT
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+ +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T Y +GI P
Sbjct: 125 LAENRAVDTSVAQAYAQEVGI-----------------------------P--------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK +IN+E+AF+ ++ AI +G + +++KP
Sbjct: 147 -------------FLETSAKESINVEEAFLAMSAAIKKSKAG-------SQAALERKP 184
>gi|397605930|gb|EJK59155.1| hypothetical protein THAOC_20656 [Thalassiosira oceanica]
Length = 206
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 144/254 (56%), Gaps = 53/254 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ YD KLL+IGDSGVGKTC+L R+++D+F+ TFI+TIGIDFKIK V++ GK+IKLQ
Sbjct: 4 SSAAYDMQVKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEVDGKRIKLQ 63
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITTSY+RGA GI+LVYD+T+ +SF++I W+ I +HA+ V K+++G
Sbjct: 64 IWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVG 123
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D ML D +VV++
Sbjct: 124 NKCD---------------------ML--------------------------DEKVVST 136
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTI 239
G+ +A+E+GV F E SAK +IN+E F+ +A A+ D+ G A V +
Sbjct: 137 ----EEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKDGGGAGPAKKGVQL 192
Query: 240 DKKPDRGGMAGGCC 253
+ G GCC
Sbjct: 193 GRNDPAAGNRKGCC 206
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 138/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+D ++ ++ISTIG+DFKI+TV+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK + N+E+AF+ +A I ++ + + + T+ +
Sbjct: 146 ------------PFIETSAKNSTNVEQAFMAMAAEIKNRMASQPAMNNARPPTVQIRGQP 193
Query: 246 GGMAGGCC 253
GCC
Sbjct: 194 VNQNSGCC 201
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/241 (40%), Positives = 135/241 (56%), Gaps = 53/241 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TVDL GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+ YYRGA GI++VYD+T+ +SF+N+ WL ID +ANE+V K+++G D
Sbjct: 65 AGQERFRTITSGYYRGAHGIIVVYDVTDMESFNNVKTWLNEIDRYANENVNKLLVGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI +
Sbjct: 125 LTSKRAVDYQTAKAFADEIGIPFL------------------------------------ 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
ETSAK++ N+E+AF+ +A I ++ + + P TI +P
Sbjct: 149 ---------------ETSAKSSTNVEQAFMTMAAEIKNRMASQTMAAKPGAATI--RPGE 191
Query: 246 G 246
G
Sbjct: 192 G 192
>gi|340374081|ref|XP_003385567.1| PREDICTED: ras-related protein Rab-1A-like [Amphimedon
queenslandica]
Length = 209
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 142/254 (55%), Gaps = 61/254 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++V+D+T+++SF N+ WL+ ID +A+ +V K+++G D
Sbjct: 67 AGQERFRTITSSYYRGANGIIIVFDVTDQESFSNVKVWLQEIDRYASTNVCKLMVGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 127 LTNKK------------------VVDFTTAKEF--------------------------- 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP---------LEAPDR 236
A + + F+ETSAK N+E+AF+ +A I K G +P ++
Sbjct: 142 ------ADQLSIPFLETSAKNATNVEQAFMTMAAEI-KKVQGNEPAPGGGGGTNVKITQS 194
Query: 237 VTIDKKPDRGGMAG 250
I KP+ GG G
Sbjct: 195 QPIKDKPNSGGGCG 208
>gi|403362358|gb|EJY80906.1| Ras-related gtp-binding protein [Oxytricha trifallax]
Length = 224
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 131/219 (59%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+L KL+LIGDSGVGKTC L RF+DD F ++ ISTIGIDFKIKT+++ GK +KLQIWDT
Sbjct: 8 FDYLIKLILIGDSGVGKTCFLLRFADDNFTSSHISTIGIDFKIKTINIDGKNVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT +YY+GAMGI+L YD T+E SF+N+ W+R I+ HA+ +VEK+++G
Sbjct: 68 AGQERFRTITQTYYKGAMGIILAYDCTSEDSFNNVRNWVRQIEVHASSNVEKILIGNKA- 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K D
Sbjct: 127 -------------------------DLTDKKVIDT------------------------- 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+G A+A+E+ ++F ETSA+ N+ + F E++ I DK
Sbjct: 137 EQGMALAKEFNMKFFETSARTGHNVNETFFEISKCIKDK 175
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 135/227 (59%), Gaps = 52/227 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++++GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T ++SF+N+ +WL ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYACENVSKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ ++ V D T F LK
Sbjct: 125 LSSKK------------------VVDFTTAMEFTESLK---------------------- 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLE 232
+ +ETSAK N+EKAF+ +A+ I K G D ++
Sbjct: 145 -----------IPLLETSAKNANNVEKAFLAMASEI-QKRIGADSVQ 179
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 58/238 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDS VGK+C L RF+DD++ ++ISTIG+DFKI+TV+++GK +KLQIWDT
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+ +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T Y +GI P
Sbjct: 125 LAENRAVDTSVAQAYAEEVGI-----------------------------P--------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK +IN+E+AF+ ++ AI +G + +++KP
Sbjct: 147 -------------FLETSAKESINVEEAFLAMSAAIKKSKAG-------SQAALERKP 184
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 134/248 (54%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + +GI
Sbjct: 125 LVDNKVVDTQTAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +IN+E+AF+ +A I K + T+ K
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTMAGEIKKKMGSQPAASKSTGTTVQMKGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 IQQKNNCC 201
>gi|223997470|ref|XP_002288408.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|223998436|ref|XP_002288891.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|220975516|gb|EED93844.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220975999|gb|EED94327.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 136/219 (62%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD KLL+IGDSGVGKTC+L R+++D+F+ TFI+TIGIDFKIK V++ GK+IKLQIWDT
Sbjct: 7 YDMQIKLLMIGDSGVGKTCLLLRYANDSFSPTFITTIGIDFKIKNVEVDGKRIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITTSY+RGA GI+LVYD+T+ +SF++I W+ I +HA+ V K+++G D
Sbjct: 67 AGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGNKCD 126
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ML D +VV++
Sbjct: 127 ---------------------ML--------------------------DEKVVST---- 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
G+ +A+E+GV F E SAK +IN+E++F+ +A ++ D+
Sbjct: 136 EEGQKLAKEFGVDFFECSAKNDINVEQSFLGIARSVKDR 174
>gi|307111274|gb|EFN59509.1| hypothetical protein CHLNCDRAFT_33935 [Chlorella variabilis]
Length = 209
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 144/258 (55%), Gaps = 60/258 (23%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
++ YD+L KLLLIGDSGVGK+C+L RF++D+F ++FI+TIGIDFKIK V + GK +KLQI
Sbjct: 5 RQDYDYLIKLLLIGDSGVGKSCLLLRFAEDSFTSSFITTIGIDFKIKKVLIDGKWVKLQI 64
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT++YYRGAMGI+LVYD+T+E SF NI W++NI++HA+++V ++G
Sbjct: 65 WDTAGQERFRTITSAYYRGAMGILLVYDVTDEASFTNIRNWMKNIEQHASDNV---LVGN 121
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D +R +Y R
Sbjct: 122 KSDMDESKR----AVAYSR----------------------------------------- 136
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY------DKTSGRDPLEAPD- 235
G+A+A E+ ++F ETSAK N N+++ F +A I +G P
Sbjct: 137 -----GQALADEFRMQFFETSAKNNTNVDEVFQSVARDIMLRLKDTQPDAGSGAGSGPSL 191
Query: 236 RVTIDKKPDRGGMAGGCC 253
RV ++ GGCC
Sbjct: 192 RVGAGQRKAVASSKGGCC 209
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 141/251 (56%), Gaps = 56/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV+ V K
Sbjct: 125 MA-----------------------------------------------DKKVVDYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ + V + P +
Sbjct: 138 EFADSL----GIPFLETSAKNANNVEQAFLTMARQIKERMGTTTTNNSKPSVQV--GPGQ 191
Query: 246 G---GMAGGCC 253
G + CC
Sbjct: 192 GVGSNQSNSCC 202
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 143/253 (56%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A D +VV V K
Sbjct: 125 MA-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTIDKKP 243
+++ G+ F+ETSAK N+E+AF+ +A I ++ T+ + L + T+ P
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTTTTNNL----KPTVQVGP 189
Query: 244 DRGGMA---GGCC 253
G A CC
Sbjct: 190 GHGVSATQSNSCC 202
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 136/248 (54%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A + V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATQGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
ED +VV V K
Sbjct: 125 M-----------------------------------------------EDKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ P + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTATVNNKPTVQVGQGQGVQ 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 SNSGSSCC 201
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 136/255 (53%), Gaps = 66/255 (25%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD ++ +I+TIG+DFKI+TVDL GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ WL ID +ANE+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKTWLHEIDRYANENVVKLLVGNKAD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + ++GI
Sbjct: 125 LTAKKVVSYETAKEFADSLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTS-------GRDPLEAPDRVT 238
F+ETSAK + N+E AF+ +A I K + G P P
Sbjct: 146 ------------EFVETSAKNSTNVETAFMTMAREIMQKNASVQSGPKGAKPTVVPSAAK 193
Query: 239 IDKKPDRGGMAGGCC 253
+ K GCC
Sbjct: 194 KESK--------GCC 200
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 132/216 (61%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGIKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A G+ F+ETSAK N+E++F+ +A I
Sbjct: 140 ------ADSLGIPFLETSAKNATNVEQSFMTMAAEI 169
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 142/253 (56%), Gaps = 59/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T++++F+N+ +WL ID +A ++V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
HT V D T K +
Sbjct: 128 ------LHTKK------------VVDYTIAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI-----YDKTSGRDPLEAPDRVTID 240
A + G+ F+ETSAK +N+E+AF+ +A I + DP ++V I+
Sbjct: 143 ------ADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP---ANKVKIE 193
Query: 241 KKPDRGGMAGGCC 253
GCC
Sbjct: 194 HGRPIESSKSGCC 206
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 141/252 (55%), Gaps = 52/252 (20%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
K YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK +KLQI
Sbjct: 2 KPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQI 61
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ W+ ID++A E V K+++G
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGN 121
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D+T++++
Sbjct: 122 K--------------------------CDLTSKRT------------------------- 130
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD-RVTIDK 241
V G+ A +RF+ETSAK N+E+AF +A+ I + P+ V +
Sbjct: 131 VTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRPNANVRLGP 190
Query: 242 KPDRGGMAGGCC 253
++ GCC
Sbjct: 191 SQPVRSVSSGCC 202
>gi|12084563|pdb|1G16|A Chain A, Crystal Structure Of Sec4-Gdp
gi|12084564|pdb|1G16|B Chain B, Crystal Structure Of Sec4-Gdp
gi|12084565|pdb|1G16|C Chain C, Crystal Structure Of Sec4-Gdp
gi|12084566|pdb|1G16|D Chain D, Crystal Structure Of Sec4-Gdp
Length = 170
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 133/218 (61%), Gaps = 52/218 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQIWDTA
Sbjct: 1 DSIXKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TITT+YYRGA GI+LVYDIT+E++F NI +W + ++EHAN++ + +++G D
Sbjct: 61 GQERFRTITTAYYRGAXGIILVYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDX 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+ +VV +
Sbjct: 121 ------------------------------------------------ETRVVTA----D 128
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 129 QGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 166
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 133/196 (67%), Gaps = 7/196 (3%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVY----DITN-EKSFDNILKWLRNIDEHANEDPQVVN 180
T + +GI + D TN E++F + ++ D A++
Sbjct: 125 LEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIK--DRMASQPANNAR 182
Query: 181 SWVCKHRGEAIAREYG 196
+ RG+ +A++ G
Sbjct: 183 PPTVQIRGQPVAQKGG 198
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 13/140 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++ +
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA- 233
N V +A A G+ FMETSAK N+E+AF+ + +I D+ + + A
Sbjct: 123 CDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKDRMASQPANNAR 182
Query: 234 PDRVTIDKKPDRGGMAGGCC 253
P V I +P GGCC
Sbjct: 183 PPTVQIRGQP--VAQKGGCC 200
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/254 (39%), Positives = 146/254 (57%), Gaps = 59/254 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFLFKLLLIGDSGVGK+C+L RF+DD + +++ISTIG+DFKI+T+++ GK +KLQIWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SFD++ +WL+ ID +A E V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQWLQEIDRYACEGVNKLLVGNKN- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFD-NILKWLRNIDEHANEDPQVVNSWVC 184
D+ ++KS + N+ K
Sbjct: 124 -------------------------DLESKKSVEFNVAK--------------------- 137
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
A + + F+ETSAK + N+E+AF+ +A I D+ G + + + K
Sbjct: 138 -----EFAEQLNIPFLETSAKDSTNVEQAFLTMAKHIKDRM-GTNSVGSGAGTKSGVKLS 191
Query: 245 RGGM-----AGGCC 253
G +GGCC
Sbjct: 192 SGQQLDQQTSGGCC 205
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 143/254 (56%), Gaps = 55/254 (21%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
++ YD+LFK+LLIG+S VGK+ +L RF+D+ FN +F+ TIG+DFKI+T DL GK +KLQI
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQI 63
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT SYY+GA GI+LVYD+T+++SF ++ WL ++++ANE+V ++++G
Sbjct: 64 WDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGN 123
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D +
Sbjct: 124 KVDLESKRE--------------------------------------------------- 132
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI---YDKTSGRDPLEAPDRVTI 239
V G+ +A +RF+ETSAK + N+EKAFI LA I K+S P++ R+T
Sbjct: 133 VTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKSSEAIPVKTGPRITP 192
Query: 240 DKKPDRGGMAGGCC 253
D++ + GCC
Sbjct: 193 DQQQNTVKDT-GCC 205
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 58/238 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDS VGK+C L RF+DD++ ++ISTIG+DFKI+T++++GK IKLQIWDT
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+ +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEIDRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T Y +GI
Sbjct: 125 LAESRTVDTSVAQAYAEEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK +IN+E+AF+ ++ AI +G + +++KP
Sbjct: 146 ------------PFLETSAKESINVEEAFLAMSAAIKKSKAG-------SQAALERKP 184
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 143/257 (55%), Gaps = 67/257 (26%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF++D + +ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQWLQEIDRYATSGVMKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV+ V K
Sbjct: 125 LT-----------------------------------------------DKKVVDYAVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---------TSGRDPLEAPDR 236
A G++F+ETSA + N+E+AFI ++ I + T+G+ +
Sbjct: 138 E----FADSRGIKFLETSASQSTNVEQAFIVMSKQIKSQMANSQPASNTAGKPSVNLSGT 193
Query: 237 VTIDKKPDRGGMAGGCC 253
I+++ GGCC
Sbjct: 194 SVINQQ-------GGCC 203
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 140/248 (56%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI +
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFM------------------------------------ 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
ETSAK+ N+E+AF+ +A I ++ + + P+ T++ +
Sbjct: 149 ---------------ETSAKSATNVEEAFMAMAAEIKNRMATQ-PMNNARPPTVNIRGQP 192
Query: 246 GGMAGGCC 253
GCC
Sbjct: 193 VNQKSGCC 200
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 134/248 (54%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + +GI
Sbjct: 125 LVENKVVDTQTAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK + N+E+AF+ +A I K G P + + K
Sbjct: 146 ------------PFLETSAKDSTNVEQAFLTMAAEIKKKM-GSQPTSSKSSGNVQMKGQP 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 IQQKSSCC 200
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 117/156 (75%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
++ T + Y +GI + T+ KS N+
Sbjct: 128 LTTKKVVDHTTAAEYAAQLGIPFLE--TSAKSATNV 161
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED--------- 175
DTAGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNK 125
Query: 176 PQVVNSWVCKHRGEA-IAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+ V H A A + G+ F+ETSAK+ N+E+AF+ +A I ++ P A
Sbjct: 126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG--PPSSAT 183
Query: 235 D---RVTIDKKPDRGGMAGGCC 253
D +V ID+ GCC
Sbjct: 184 DNASKVKIDQGRPVEKPNSGCC 205
>gi|145522135|ref|XP_001446917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833715|emb|CAI39332.1| rab_C73 [Paramecium tetraurelia]
gi|124414406|emb|CAK79520.1| unnamed protein product [Paramecium tetraurelia]
Length = 213
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 138/258 (53%), Gaps = 60/258 (23%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
K+ +D+L K+LLIGDSGVGKT VL RF ++ F T++STIGIDFKIK++D++GKKIK+QI
Sbjct: 9 KENFDWLIKVLLIGDSGVGKTNVLLRFCENNFQPTYLSTIGIDFKIKSIDVEGKKIKMQI 68
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT +YY+GAMGI+LVY I + +SF NI W+ I +HA+E+V K+++G
Sbjct: 69 WDTAGQERFKTITQTYYKGAMGIILVYSIDDRESFKNIQNWMSQIKQHASENVCKLLIGN 128
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D ++
Sbjct: 129 KIDVPNRQ---------------------------------------------------- 136
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR---DPLEAPDRVTI 239
V K GE +A+ YGV F ETSAK + AF +A A+ S +P AP +I
Sbjct: 137 VTKEEGEELAKSYGVSFFETSAKEGTQVSDAFYAIAKAVKANLSNEKTPNP-SAPQNASI 195
Query: 240 DKKPDRGGM----AGGCC 253
+ + GGCC
Sbjct: 196 NLTQNNHAADEKKNGGCC 213
>gi|410932295|ref|XP_003979529.1| PREDICTED: ras-related protein Rab-1B-like [Takifugu rubripes]
Length = 214
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 132/224 (58%), Gaps = 51/224 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+D+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T ++SF+N+ WL ID +A E V ++++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIVIVYDVTEQESFNNVKLWLDEIDRYACESVSRLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
G+ + +D A +D
Sbjct: 125 LVGR------------------------------------KVVDAAAAQD---------- 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD 229
+ + F+ETSAK + N+EK F+ +A+ I+ + S +
Sbjct: 139 -----LTSSLEISFLETSAKNSDNVEKVFLTMASDIHQRLSAEE 177
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 139/248 (56%), Gaps = 55/248 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+D++F+ T+ISTIG+DFKI+T+DL GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VY +T++ SF N+ WL+ I+ +AN V ++++G D
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKSWLQEIEHYANSTVNRLLVGNKCD 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
T+ D N
Sbjct: 124 LPKSRAVDTV---------------DAMN------------------------------- 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A+E+ + F+ETSAK IN+E AF+E+A I T+ P+++
Sbjct: 138 -----FAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTA---PMQSMSSNVTVNSTQP 189
Query: 246 GGMAGGCC 253
+GGCC
Sbjct: 190 VTKSGGCC 197
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/249 (39%), Positives = 139/249 (55%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ + +VV+ V K
Sbjct: 125 MS-----------------------------------------------EKKVVDYQVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD- 244
+++ G+ F+ETSAK N+E+AF+ +A I ++ V +
Sbjct: 138 EFADSL----GIPFLETSAKNANNVEQAFLTMARQIKERMGSTATNNTKPSVQVGAGHGV 193
Query: 245 RGGMAGGCC 253
+GGCC
Sbjct: 194 SNNSSGGCC 202
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/245 (41%), Positives = 141/245 (57%), Gaps = 56/245 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD + K+LLIGDSGVGK+C+L RF +D F+ +FI+TIGIDFKIKTVD+ GKKIKLQ+W
Sbjct: 9 KQYDSIMKVLLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKIKLQLW 68
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F+N+ W + + +HA +D + +++G
Sbjct: 69 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENVKNWFKTVSDHATDDAQLLLVGNK 128
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D M LV T+E
Sbjct: 129 CD------------------MDTRLV---THE---------------------------- 139
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+GEA+ +E G+ F+E SAK + N+ + F LA I GR ++ T +
Sbjct: 140 ---QGEALGKELGIPFVEASAKDDTNVNEVFFTLAKLI----QGRLDSQSAADSTAGRGN 192
Query: 244 DRGGM 248
+GG+
Sbjct: 193 SKGGV 197
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T++++F+N+ +WL ID +A ++V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ I V D T K +
Sbjct: 128 ------------------LHIKKVVDYTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A + G+ F+ETSAK +N+E+AF+ +A I
Sbjct: 143 ------ADQLGIPFLETSAKNAMNVEQAFMTMAAEI 172
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 117/156 (75%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
++ T + Y +GI + T+ KS N+
Sbjct: 128 LTTKKVVDHTTAAEYAAQLGIPFLE--TSAKSATNV 161
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED--------- 175
DTAGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNK 125
Query: 176 PQVVNSWVCKHRGEA-IAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+ V H A A + G+ F+ETSAK+ N+E+AF+ +A I ++ P A
Sbjct: 126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG--PPSSAT 183
Query: 235 D---RVTIDKKPDRGGMAGGCC 253
D +V ID+ GCC
Sbjct: 184 DNASKVKIDQGRPVENTKSGCC 205
>gi|397620779|gb|EJK65905.1| hypothetical protein THAOC_13196 [Thalassiosira oceanica]
Length = 205
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 144/253 (56%), Gaps = 53/253 (20%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
+ YD KLL+IGDSGVGKTC+L R+++++F+ TFI+TIGIDFKIK V++ GK+IKLQI
Sbjct: 4 QSAYDMQVKLLMIGDSGVGKTCLLLRYANESFSPTFITTIGIDFKIKNVEVDGKRIKLQI 63
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TITTSY+RGA GI+LVYD+T+ +SF++I W+ I +HA+ V K+++G
Sbjct: 64 WDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRNWISQIQQHADVHVNKILVGN 123
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D ML D +VV++
Sbjct: 124 KCD---------------------ML--------------------------DEKVVST- 135
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTID 240
G+ +A+E+GV F E SAK +IN+E F+ +A A+ D+ G A V +
Sbjct: 136 ---EEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKDRLMKDGGGAGPAKKGVQLG 192
Query: 241 KKPDRGGMAGGCC 253
+ G GCC
Sbjct: 193 RNDPAAGNRKGCC 205
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 117/156 (75%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
++ T + Y +GI + T+ KS N+
Sbjct: 128 LTTKKVVDHTTAAEYAAQLGIPFLE--TSAKSATNV 161
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED--------- 175
DTAGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNK 125
Query: 176 PQVVNSWVCKHRGEA-IAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+ V H A A + G+ F+ETSAK+ N+E+AF+ +A I ++ P A
Sbjct: 126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG--PPSSAT 183
Query: 235 D---RVTIDKKPDRGGMAGGCC 253
D +V ID+ GCC
Sbjct: 184 DNASKVKIDQGRPVENTRSGCC 205
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/156 (53%), Positives = 117/156 (75%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
++ T + Y +GI + T+ KS N+
Sbjct: 128 LTTKKVVDHTTAAEYAAQLGIPFLE--TSAKSATNV 161
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED--------- 175
DTAGQERF TIT+SYYRGA GI++VYD T+++SF+N+ +WL I+ +A E+
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNK 125
Query: 176 PQVVNSWVCKHRGEA-IAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
+ V H A A + G+ F+ETSAK+ N+E+AF+ +A I ++ P A
Sbjct: 126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVG--PPSSAT 183
Query: 235 D---RVTIDKKPDRGGMAGGCC 253
D +V ID+ GCC
Sbjct: 184 DNASKVKIDQGRPVENTKSGCC 205
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 133/198 (67%), Gaps = 10/198 (5%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVY----DITN-EKSFDNILKWLRNIDEHANEDPQVVN 180
T + +GI + D TN E++F + +I E P N
Sbjct: 125 LTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAF---MAMSASIKERMASQPAGNN 181
Query: 181 S--WVCKHRGEAIAREYG 196
+ + RG+ +A++ G
Sbjct: 182 ARPPTVQIRGQPVAQKNG 199
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHA----------NE 174
DTAGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A N+
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK 122
Query: 175 DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
N + +A A E G+ FMETSAK N+E+AF+ ++ +I ++ + +
Sbjct: 123 SDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 235 DRVTIDKKPDRGGMAGGCC 253
T+ + GCC
Sbjct: 183 RPPTVQIRGQPVAQKNGCC 201
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 138/249 (55%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TVDL GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T++ SF N+ +WL ID +A ++V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNK-- 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K VV+ K
Sbjct: 123 ------------------------CDLTTKK---------------------VVDFSTAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP-DRVTIDKKPD 244
E + + F+ETSAK + N+E+AF+ +A I + AP V ID+
Sbjct: 138 QYAEQLG----IPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAPAGHVKIDQGQP 193
Query: 245 RGGMAGGCC 253
CC
Sbjct: 194 IDTGKSSCC 202
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYSVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ V + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNTKPSVHVGQGQGV 193
Query: 246 GGMAGGCC 253
G + C
Sbjct: 194 GNSSSSSC 201
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 132/221 (59%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
+ YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIW
Sbjct: 16 RRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 75
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G
Sbjct: 76 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNK 135
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + D +VV V
Sbjct: 136 SDMS-----------------------------------------------DKKVVEYTV 148
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K +++ G+ F+ETSAK N+E+AF+ +A I ++
Sbjct: 149 AKEFADSL----GIPFLETSAKNASNVEQAFLTMARQIKER 185
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 137/251 (54%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DDA+ ++ISTIG+DFKI+T++ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T +SF+N+ +WL ID +ANE V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T +GI
Sbjct: 125 MVENKVVSTETGKALADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR---DPLEAPDRVTIDKK 242
F+ETSAK +IN+E+AF+ +A I K + + P V + +
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQ 193
Query: 243 PDRGGMAGGCC 253
P + GGCC
Sbjct: 194 PIQQN-NGGCC 203
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 143/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD++ ++ISTIG+DFKI+TV+ GK IKL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEKDGKTIKLXIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYR A GI++VYD+ +E F+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYREAHGIIIVYDVIDEDRFNNVKQWLSEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+TT+ ++ YD E
Sbjct: 125 ---------MTTNR-------VVSYDTAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLE--APDRVTIDKKP 243
A + G+ FMETSAK N+E AF+ ++TAI ++ + + P V I +P
Sbjct: 139 -----FADQIGIPFMETSAKDATNVEDAFMAMSTAIKNRMASQPSANNAKPPIVHIKGQP 193
Query: 244 DRGGMAGGCC 253
G GCC
Sbjct: 194 --VGPKSGCC 201
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 137/248 (55%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK N+E+AF+ +A I ++ V + +
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNTKPSVHVGQGQGV 193
Query: 246 GGMAGGCC 253
G + C
Sbjct: 194 GNSSSSSC 201
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 134/224 (59%), Gaps = 51/224 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 121 GNKS--------------------------DLTSKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V K A + + F+ETSAK N+E+AF+ +A I D+
Sbjct: 134 YSVAKE----FADQLSIPFLETSAKNATNVEQAFLTMAKQIKDR 173
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 139/252 (55%), Gaps = 58/252 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+ L+ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SFDN+ +W++ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +VV S
Sbjct: 125 LVSK-----------------------------------------------RVVTS---- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G +A +G++F+ETSAK N+E+AF +A I + R + + P
Sbjct: 134 DEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVN---SQNTRGSAQQGPKL 190
Query: 246 GGM----AGGCC 253
G GGCC
Sbjct: 191 AGAQPIRQGGCC 202
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 131/219 (59%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+++ G+ F+ETSAK N+E+AF+ +A I ++
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKER 172
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 55/249 (22%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDTA
Sbjct: 22 DYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 81
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++V+D+T+E+SF N+ WL ID+ A +++ K+++G
Sbjct: 82 GQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKGWLTEIDKFATDNINKLLVGNK--- 138
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
D+TN++ N
Sbjct: 139 -----------------------CDVTNKRVVSN-------------------------E 150
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA--PDRVTIDKKPD 244
+A A E G+ F+ETSAK N+E AF+ +A I + + + A P V I KP
Sbjct: 151 TAKAFADEIGIPFLETSAKNATNVEDAFMTMAAEIKKRMASQPAANAVRPTTVPIRGKP- 209
Query: 245 RGGMAGGCC 253
+ CC
Sbjct: 210 -VNQSTTCC 217
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 3 YDALFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 62
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 122
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 123 LTTKK------------------VVDYTTAKEF--------------------------- 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
A G+ F+ETSAK N+E++F+ +A I
Sbjct: 138 ------ADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 140/252 (55%), Gaps = 58/252 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+ L+ K +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SFDN+ +W++ ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +VV S
Sbjct: 125 LVSK-----------------------------------------------RVVTS---- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+ +A YG++F+ETSAK N+E+AF +A I + + + + P
Sbjct: 134 DEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQLNNQ---NTKGVTQQGPKL 190
Query: 246 GGM----AGGCC 253
G GGCC
Sbjct: 191 AGAQPIRQGGCC 202
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 131/219 (59%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 51 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 110
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 111 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 170
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 171 MS-----------------------------------------------DKKVVEYTVAK 183
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+++ G+ F+ETSAK N+E+AF+ +A I ++
Sbjct: 184 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKER 218
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 145/251 (57%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+++SF+N+ +WL+ ID +A E+V K+++G
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNK-- 125
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K D+
Sbjct: 126 ------------------------CDLTTKKVVDH------------------------- 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTID-KK 242
A++ + F+ETSAK + N+E+AF ++A I + +G + +++ I+ +
Sbjct: 137 STAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIMARMGPAGGEQIKSQGEGKINPSR 196
Query: 243 PDRGGMAGGCC 253
P GCC
Sbjct: 197 PVEPNKGSGCC 207
>gi|343172838|gb|AEL99122.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 134/237 (56%), Gaps = 51/237 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFLFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+T +L+GK +K + WDT
Sbjct: 5 YDFLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTTELEGKSVKYRFWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL I+ +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEINRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
V N V
Sbjct: 125 L---------------------------------------------------VENRVVDT 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK 242
G+A+A E G+ F+ETSAK +N+EKAF+ +A I K + R T+ K
Sbjct: 134 QMGQALADELGIPFLETSAKDAVNVEKAFLTMAGEIKKKVGNQTTANKSSRGTVPLK 190
>gi|343172836|gb|AEL99121.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 135/237 (56%), Gaps = 51/237 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+T++L+GK +K + WDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELEGKSVKYRFWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL I+ +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEINRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
V N V
Sbjct: 125 L---------------------------------------------------VENRVVDT 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKK 242
G+A+A E G+ F+ETSAK +N+EKAF+ +A I K + R T+ K
Sbjct: 134 QMGQALADELGIPFLETSAKDAVNVEKAFLTMAGEIKKKVGNQTTANKSSRGTVPLK 190
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 131/222 (59%), Gaps = 51/222 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+G+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ W+ I+ +A+E+V K+I+G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNMHLWMEEINRYASENVNKLIVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T Y ++G+
Sbjct: 128 LTSKKAVDYTTAKEYADSLGV--------------------------------------- 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
F+ETSAK N+E+AF+ +A I ++ S
Sbjct: 149 ------------PFLETSAKNATNVEQAFLTMAAEIKNRVSS 178
>gi|72392251|ref|XP_846926.1| small GTP-binding protein Rab1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|38224657|gb|AAR14146.1| Rab1 [Trypanosoma brucei]
gi|62175231|gb|AAX69377.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei]
gi|70802956|gb|AAZ12860.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261330114|emb|CBH13098.1| small GTP-binding protein Rab1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 208
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/260 (40%), Positives = 143/260 (55%), Gaps = 68/260 (26%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T+D+ GK IKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLDIDGKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ WL ID+ A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIDKFASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + ++GI +
Sbjct: 125 LVTKKAVDTQMAQEFADSLGIPFL------------------------------------ 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK----------TSGRDPLEAPD 235
ETSAK + N+E AFIE+A I + T+G PL
Sbjct: 149 ---------------ETSAKESSNVETAFIEMAKNIKKRVAAQGANSGATAGGRPL---- 189
Query: 236 RVTIDKKP--DRGGMAGGCC 253
+T + +P + GG GCC
Sbjct: 190 -LTGNNRPATNSGGQKSGCC 208
>gi|323337771|gb|EGA79014.1| Sec4p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 105/122 (86%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KD 125
D
Sbjct: 135 SD 136
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 9/103 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ Q++
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 180 ----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
V +GEA+A+E G+ F+E+SAK + N+ + F L
Sbjct: 135 SDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFHLG 177
>gi|323309243|gb|EGA62464.1| Sec4p [Saccharomyces cerevisiae FostersO]
Length = 186
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 105/122 (86%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KD 125
D
Sbjct: 135 SD 136
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 9/103 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ Q++
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 180 ----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
V +GEA+A+E G+ F+E+SAK + N+ + F L
Sbjct: 135 SDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEXFFHLG 177
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/224 (42%), Positives = 134/224 (59%), Gaps = 51/224 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KL
Sbjct: 1 MHTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ +F N+ +WL+ ID +A+E V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQWLQEIDRYASEGVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D+T++K VV
Sbjct: 121 GNKS--------------------------DLTSKK---------------------VVE 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V K A + + F+ETSAK N+E+AF+ +A I D+
Sbjct: 134 YGVAKE----FADQLSIPFLETSAKNATNVEQAFLTMAKQIKDR 173
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 135/248 (54%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T + +GI
Sbjct: 125 LVENKVVDTQTAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +IN+E+AF+ +A I K G P + T+ K
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTMAGEI-KKKMGNQPTASKSTGTVQMKGQP 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 IEQKNNCC 200
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 132/219 (60%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV+ V K
Sbjct: 125 MS-----------------------------------------------DKKVVDYTVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+++ G+ F+ETSAK N+E+AF+ +A I ++
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKER 172
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 140/250 (56%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T +L+GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A E V ++++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV V K
Sbjct: 128 MV-----------------------------------------------DKKVVEYSVAK 140
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD--PLEAPDRVTIDKKP 243
+++ + F+ETSAK + N+E+AF+ ++ I ++ A V + +
Sbjct: 141 EFADSL----NIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGT 196
Query: 244 DRGGMAGGCC 253
+ + CC
Sbjct: 197 NVSQSSSNCC 206
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/233 (40%), Positives = 139/233 (59%), Gaps = 51/233 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDS VGK+C+L RF+DD++ T+ISTIG+DFKI+T++L GK +KLQIWDTA
Sbjct: 5 DYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTA 64
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +A++ V K+++G D
Sbjct: 65 GQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQWLSEIDRYASDSVCKLLVGNKCDL 124
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
D +VV++
Sbjct: 125 V-----------------------------------------------DSKVVDT----E 133
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTI 239
+A A G+ F+ETSAK +IN+E+AF+ +++ I + + + +E V I
Sbjct: 134 EAKAFAESLGISFLETSAKESINVEEAFLTMSSDIKKRMATQPAVERKPTVHI 186
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 131/219 (59%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYSVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+++ G+ F+ETSAK N+E+AF+ +A I ++
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKER 172
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 136/248 (54%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDTVCKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ ++T + +GI
Sbjct: 125 LVDNKVVDSLTAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +IN+E+AF+ +A I K G ++ K
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTMAAEI-KKKMGSQTTTGKSAESVQMKGQP 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 IPQKSNCC 200
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 30 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 89
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 90 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 149
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F + L
Sbjct: 150 LTTKK------------------VVDYTTAKEFADSL----------------------- 168
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
G+ F+ETSAK N+E++F A I
Sbjct: 169 ----------GIPFLETSAKNATNVEQSFXTXAAEI 194
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 105/122 (86%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KD 125
D
Sbjct: 135 SD 136
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 77/109 (70%), Gaps = 9/109 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ Q++
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 180 ----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V +GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 135 SDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 183
>gi|134105123|pdb|2OCY|C Chain C, Complex Of The Guanine Exchange Factor Sec2p And The Rab
Gtpase Sec4p
Length = 170
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 133/218 (61%), Gaps = 52/218 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+WDTA
Sbjct: 1 DSIXKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TITT+YYRGA GI+LVYD+T+E++F NI +W + ++EHAN++ + +++G D
Sbjct: 61 GQERFRTITTAYYRGAXGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDX 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
+ +VV +
Sbjct: 121 ------------------------------------------------ETRVVTA----D 128
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K
Sbjct: 129 QGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK 166
>gi|426361811|ref|XP_004048091.1| PREDICTED: putative Ras-related protein Rab-1C-like [Gorilla
gorilla gorilla]
Length = 201
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 140/250 (56%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDRLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA G ++VYD+T+ +S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFWTITSSYYRGAHGFLVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++T +K DN
Sbjct: 124 -------------------------NLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTIDKKP 243
+ A G+ F+ETSAK N+E+ F+ +A I + E PD + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQVFMTMAAEITKQMGPGAASGGEWPD-LKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKPA-GGGCC 201
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/196 (46%), Positives = 133/196 (67%), Gaps = 7/196 (3%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVY----DITN-EKSFDNILKWLRNIDEHANEDPQVVN 180
T + +GI + D TN E++F + ++ D A++
Sbjct: 125 LEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIK--DRMASQPANNAR 182
Query: 181 SWVCKHRGEAIAREYG 196
+ RG+ +A++ G
Sbjct: 183 PPTVQIRGQPVAQKGG 198
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 86/140 (61%), Gaps = 13/140 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++ +
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA- 233
N V +A A E G+ FMETSAK N+E+AF+ +A +I D+ + + A
Sbjct: 123 CDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPANNAR 182
Query: 234 PDRVTIDKKPDRGGMAGGCC 253
P V I +P GGCC
Sbjct: 183 PPTVQIRGQP--VAQKGGCC 200
>gi|323333722|gb|EGA75114.1| Sec4p [Saccharomyces cerevisiae AWRI796]
Length = 186
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 78/122 (63%), Positives = 105/122 (86%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KD 125
D
Sbjct: 135 SD 136
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 73/103 (70%), Gaps = 9/103 (8%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ Q++
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 180 ----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELA 218
V +GEA+A+E G+ F+E+SAK + N+ + F L
Sbjct: 135 SDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEYFFHLG 177
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum CS3096]
Length = 202
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 131/219 (59%), Gaps = 51/219 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ D +VV V K
Sbjct: 125 MS-----------------------------------------------DKKVVEYSVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
+++ G+ F+ETSAK N+E+AF+ +A I ++
Sbjct: 138 EFADSL----GIPFLETSAKNASNVEQAFLTMARQIKER 172
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 145/251 (57%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + +ISTIG+DFKIKTV+L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ WL+ ID V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKTWLQEIDRFGTAGVLKLLVGNKN- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K VV++ V K
Sbjct: 124 -------------------------DLTDKK---------------------VVDTEVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTS--GRDPLEAPDRVTID-KK 242
++I G+ F+ETSA + N+E+AF+ + I + + +D A D+ ++ K
Sbjct: 138 EFADSI----GIPFIETSALDSSNVEEAFLIMTKQIKESVAKQQKDNGRAEDKSNVNLKG 193
Query: 243 PDRGGMAGGCC 253
G GGCC
Sbjct: 194 QSLTGSNGGCC 204
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 131/229 (57%), Gaps = 52/229 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQWLHEIDRYACENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LEAKRAVTTEEAKAFADTLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
F+ETSAK N+EKAF+ +A+ I + + P AP
Sbjct: 146 ------------EFLETSAKNASNVEKAFMMMASQIKSRMKSQ-PTGAP 181
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/251 (38%), Positives = 145/251 (57%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+++SF+N+ +WL+ ID +A E+V K+++G
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQWLQEIDRYACENVNKLLVGNK-- 125
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K D+
Sbjct: 126 ------------------------CDLTTKKVVDH------------------------- 136
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK--TSGRDPLEAPDRVTID-KK 242
A++ + F+ETSAK + N+E+AF ++A I + +G + +++ I+ +
Sbjct: 137 STAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIMARMGPAGGEQIKSQGEGKINPSR 196
Query: 243 PDRGGMAGGCC 253
P GCC
Sbjct: 197 PVEPNKGSGCC 207
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 58/238 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDS VGK+C L RF+DD++ ++ISTIG+DFKI+T++++GK IKLQIWDT
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+ +SF+N +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDMESFNNAKQWLSEIDRYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T Y +GI
Sbjct: 125 LAESRTVDTSVAQAYAEEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK +IN+E+AF+ ++ AI +G + +++KP
Sbjct: 146 ------------PFLETSAKESINVEEAFLAMSAAIKKSKAG-------SQAALERKP 184
>gi|358057810|dbj|GAA96312.1| hypothetical protein E5Q_02978 [Mixia osmundae IAM 14324]
Length = 264
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 79/120 (65%), Positives = 102/120 (85%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y L K+LLIGDSGVGK+C+L RF DDA+ +FI+T+GIDFKI+T++L GK+IKLQIWDT
Sbjct: 41 YHILLKMLLIGDSGVGKSCLLLRFCDDAWTPSFITTVGIDFKIRTIELDGKRIKLQIWDT 100
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E V K+++G D
Sbjct: 101 AGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKLLIGNKCD 160
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 88/145 (60%), Gaps = 19/145 (13%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF+NI W NI++HA+E +
Sbjct: 99 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWHANIEQHASEGVNKLLIGNK 158
Query: 180 NSW-----VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRDPL 231
W + + +G +A E GV ++ETSAK NIN+E+AF LA + ++ T+G D
Sbjct: 159 CDWTEKKVITEQQGRELADELGVGYLETSAKTNINVEEAFFTLAREVKNRLVDTAGPDAA 218
Query: 232 EAPDR---VTIDKKPDRGGMAGGCC 253
+R V + P GCC
Sbjct: 219 AGANRPGAVNFNSGPS---AKAGCC 240
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 136/238 (57%), Gaps = 58/238 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDS VGK+C L RF+DD++ ++ISTIG+DFKI+TV+++GK +KLQIWDT
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+ +SF+N+ +WL ID +AN+ V +++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRNVLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T Y +GI P
Sbjct: 125 LAENRAVDTSVAQAYAQEVGI-----------------------------P--------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK +IN+E+AF+ ++ AI +G + +++KP
Sbjct: 147 -------------FLETSAKESINVEEAFLAMSAAIKKSKAG-------SQAALERKP 184
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 141/252 (55%), Gaps = 59/252 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD T++++F+N+ +WL ID +A ++V K+++G D
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD- 129
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
HT V D T K +
Sbjct: 130 -----LHT------------KKVVDYTTAKEY---------------------------- 144
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAI-----YDKTSGRDPLEAPDRVTIDK 241
A + G+ F+ETSAK +N+E+AF+ +A I + DP ++V I+
Sbjct: 145 -----ADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP---ANKVKIEH 196
Query: 242 KPDRGGMAGGCC 253
GCC
Sbjct: 197 GRPIESSKSGCC 208
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 11/182 (6%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 9 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 68
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 69 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 128
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI----LKWLRNIDEH-----ANEDP 176
A ++ + ++GI + T+ KS N+ L R I E AN P
Sbjct: 129 MADKKVVEYTVAKEFADSLGIPFLE--TSAKSATNVEQAFLTMARQIKERMGTTTANTKP 186
Query: 177 QV 178
V
Sbjct: 187 TV 188
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 18/114 (15%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE---------- 174
DTAGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E
Sbjct: 67 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNK 126
Query: 175 ----DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
D +VV V K +++ G+ F+ETSAK+ N+E+AF+ +A I ++
Sbjct: 127 SDMADKKVVEYTVAKEFADSL----GIPFLETSAKSATNVEQAFLTMARQIKER 176
>gi|148701156|gb|EDL33103.1| RAB1B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 189
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 111/141 (78%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGI 146
++ T R A+ +
Sbjct: 125 LTTKKVVDNTTAKVSRPALAV 145
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/51 (60%), Positives = 45/51 (88%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
DTAGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASEN 113
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 133/198 (67%), Gaps = 10/198 (5%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 60 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 119
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 120 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSD 179
Query: 126 TAGQERFHTITTSYYRGAMGIMLV----YDITN-EKSFDNILKWLRNIDEHANEDPQVVN 180
T + +GI + D TN E++F + +I E P N
Sbjct: 180 LTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAF---MAMSASIKERMASQPAGNN 236
Query: 181 S--WVCKHRGEAIAREYG 196
+ + RG+ +A++ G
Sbjct: 237 ARPPTVQIRGQPVAQKNG 254
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHA----------NE 174
DTAGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A N+
Sbjct: 118 DTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK 177
Query: 175 DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
N + +A A E G+ FMETSAK N+E+AF+ ++ +I ++ + +
Sbjct: 178 SDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 237
Query: 235 DRVTIDKKPDRGGMAGGCC 253
T+ + GCC
Sbjct: 238 RPPTVQIRGQPVAQKNGCC 256
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/250 (38%), Positives = 140/250 (56%), Gaps = 53/250 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T +L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ SF+N+ +WL+ ID +A E V ++++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D +VV V K
Sbjct: 125 MV-----------------------------------------------DKKVVEYSVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD--PLEAPDRVTIDKKP 243
+++ + F+ETSAK + N+E+AF+ ++ I ++ A V + +
Sbjct: 138 EFADSL----NIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGT 193
Query: 244 DRGGMAGGCC 253
+ + CC
Sbjct: 194 NVSQSSSNCC 203
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 141/252 (55%), Gaps = 59/252 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++VYD T++++F+N+ +WL ID +A ++V K+++G D
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD- 129
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
HT V D T K +
Sbjct: 130 -----LHTKK------------VVDYTTAKEY---------------------------- 144
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAI-----YDKTSGRDPLEAPDRVTIDK 241
A + G+ F+ETSAK +N+E+AF+ +A I + DP ++V I+
Sbjct: 145 -----ADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP---ANKVKIEH 196
Query: 242 KPDRGGMAGGCC 253
GCC
Sbjct: 197 GRPIESSKSGCC 208
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/244 (40%), Positives = 141/244 (57%), Gaps = 53/244 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+DF FK+LLIGDSGVGK+C+L RF+DD++ T ISTIG+DFKIKT++L GK IKLQIWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI+LVYD T++ SF+N+ +W+ I+ +A E+V K+++G
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQWMGEIERYACENVNKLLVGNKT- 125
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+ NEK D+
Sbjct: 126 -------------------------DLVNEKVVDS------------------------- 135
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTS--GRDPLEAPDRVTIDKKP 243
++ ++ A G+ F+ETSAK N+E+ FI +A I ++ + P ++ D KKP
Sbjct: 136 NQAKSFAESMGIPFIETSAKNATNVEECFISMARDIKNRLADIQDSPSKSEDVDIKAKKP 195
Query: 244 DRGG 247
+ G
Sbjct: 196 IKSG 199
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/238 (40%), Positives = 137/238 (57%), Gaps = 58/238 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDS VGK+C L RF+DD++ ++ISTIG+DFKI+T+D+ GK IKLQIWDT
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTLDMDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+ +SF+N+ +WL I+++AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLSEINKYANDSVRKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T Y +GI P
Sbjct: 125 LAESRVVDTAVAQAYADEIGI-----------------------------P--------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK +IN+E+AF+ ++ AI +G + +++KP
Sbjct: 147 -------------FLETSAKESINVEEAFLAMSAAIKKSKAGSQGV-------LERKP 184
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 132/229 (57%), Gaps = 52/229 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+ +L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ +SF+N+ +WL ID +A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYACENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
G+ T + +GI
Sbjct: 125 LEGKRVVSTEQGKEFADGLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
F+ETSAK + N+E+AF+ +A+ I + + P AP
Sbjct: 146 ------------EFLETSAKTSTNVEQAFLTMASQIKARMKNQ-PSAAP 181
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 11/182 (6%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 28 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 87
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 88 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 147
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI----LKWLRNIDEH-----ANEDP 176
A ++ + ++GI + T+ KS N+ L R I E AN P
Sbjct: 148 MADKKVVEYTVAKEFADSLGIPFLE--TSAKSATNVEQAFLTMARQIKERMGTTTANTKP 205
Query: 177 QV 178
V
Sbjct: 206 TV 207
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 18/114 (15%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE---------- 174
DTAGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E
Sbjct: 86 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNK 145
Query: 175 ----DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
D +VV V K +++ G+ F+ETSAK+ N+E+AF+ +A I ++
Sbjct: 146 SDMADKKVVEYTVAKEFADSL----GIPFLETSAKSATNVEQAFLTMARQIKER 195
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis niloticus]
Length = 212
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 116/156 (74%), Gaps = 2/156 (1%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+D+ GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T ++SF+N+ +WL ID +A E+V ++++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLDEIDRYACENVSRLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI 161
++ T ++ I + T+ KS DN+
Sbjct: 125 LVSKKVVDAATAQDLASSLKIPFLE--TSAKSSDNV 158
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 71/110 (64%), Gaps = 10/110 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHA----------NE 174
DTAGQERF TIT+SYYRGA GI++VYD+T ++SF+N+ +WL ID +A N+
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLDEIDRYACENVSRLLVGNK 122
Query: 175 DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
V V + +A + F+ETSAK++ N+E+AF+ +A+ I+ +
Sbjct: 123 SDLVSKKVVDAATAQDLASSLKIPFLETSAKSSDNVERAFLTMASEIHKR 172
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 88/175 (50%), Positives = 122/175 (69%), Gaps = 6/175 (3%)
Query: 8 FLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTAG 67
++ KLLLIGDSGVGK+C L RFS+D+F +FI+TIGIDFKI+T++L GK++KLQIWDTAG
Sbjct: 298 YVIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWDTAG 357
Query: 68 QERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDTA 127
QERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E V K+++G D
Sbjct: 358 QERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNKCDWE 417
Query: 128 GQERFHTITTSYYRGAMGIMLVY-----DITNEKSFDNILKWL-RNIDEHANEDP 176
+ T +GI + +I EK+F N+ + + +D +E P
Sbjct: 418 EKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSEQP 472
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 88/144 (61%), Gaps = 17/144 (11%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TITT+YYRGAMGI+LVYD+T+E+SF NI W N+++HA+E +
Sbjct: 354 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIRTWFSNVEQHASEGVHKILIGNK 413
Query: 180 NSW-----VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI---YDKTSGRDPL 231
W V +G+ +A E G+ F+E SAK NINIEKAF LA+ I D + P
Sbjct: 414 CDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSEQP- 472
Query: 232 EAPDRVTIDKK-PDRGGMAGG-CC 253
V+ID++ P G GG CC
Sbjct: 473 -GSQGVSIDQQGPGPNGSTGGKCC 495
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 123/182 (67%), Gaps = 11/182 (6%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI----LKWLRNIDEH-----ANEDP 176
A ++ + ++GI + T+ KS N+ L R I E AN P
Sbjct: 125 MADKKVVEYTVAKEFADSLGIPFLE--TSAKSATNVEQAFLTMARQIKERMGTTTANTKP 182
Query: 177 QV 178
V
Sbjct: 183 TV 184
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%), Gaps = 18/114 (15%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE---------- 174
DTAGQERF TIT+SYYRGA GI +VYD+T+ SF+N+ +WL+ ID +A E
Sbjct: 63 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNK 122
Query: 175 ----DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
D +VV V K +++ G+ F+ETSAK+ N+E+AF+ +A I ++
Sbjct: 123 SDMADKKVVEYTVAKEFADSL----GIPFLETSAKSATNVEQAFLTMARQIKER 172
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 131/222 (59%), Gaps = 51/222 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
+D+LFKLLLIGDS VGK+C L RF+DDA+ ++ISTIG+DFKI+TV++ GK IKLQIWDT
Sbjct: 5 FDYLFKLLLIGDSSVGKSCFLLRFADDAYVDSYISTIGVDFKIRTVEIDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYDIT+ +SF+N+ +WL ID++AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGANGIIIVYDITDMESFNNVKQWLSEIDKYANDSVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A T Y +GI P
Sbjct: 125 LAESRVVDTSVAQAYADEIGI-----------------------------P--------- 146
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
F+ETSAK +IN+E+AF+ ++ AI +G
Sbjct: 147 -------------FLETSAKDSINVEEAFLAMSEAIKKSKAG 175
>gi|47209142|emb|CAF90455.1| unnamed protein product [Tetraodon nigroviridis]
Length = 185
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 130/221 (58%), Gaps = 51/221 (23%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+D A+ ++ISTIG+DFKI+TVD+ GK +KLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADGAYTDSYISTIGVDFKIRTVDMDGKTVKLQIWDTA 60
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI+LVYD+T + SFDN+ W+ I+ +A EDV ++++G D
Sbjct: 61 GQERFRTITSSYYRGAHGIVLVYDVTEQASFDNVRLWMDEIERYACEDVSRLLVGNKSDL 120
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
Q + +D A +D
Sbjct: 121 LAQ------------------------------------KVVDAAAAQD----------- 133
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
+A + F+ETSAK + N+EK F+ LA+ I+ + S
Sbjct: 134 ----LASCLKIPFLETSAKNSENVEKVFLTLASDIHRRLSA 170
>gi|431906666|gb|ELK10787.1| Ras-related protein Rab-26 [Pteropus alecto]
Length = 284
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 141/251 (56%), Gaps = 31/251 (12%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAF-NTTFISTIGIDFKIKTVDLKGKKIKLQIWD 64
YD FK++L+GDSGVGKTC+L RF D AF TFIST+GIDF+ K +D+ G K+KLQIWD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWD 119
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
TAGQERF ++T +YYR A ++L+YD+TN+ SFDNI WL I E+A DV M+LG
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIQEYAQHDVVLMLLG--- 176
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
+ T G+ G + ++ + L +D V
Sbjct: 177 -----NKVGIPTCPLQPGSEGRLAPGQLSP--------RSLYQVDSTQER-------VVK 216
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD--RVTIDKK 242
+ GE +A+EYG+ FMETSAK +N++ AF +A + ++ ++AP R +
Sbjct: 217 REDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRS-----MKAPSEPRFQLHDY 271
Query: 243 PDRGGMAGGCC 253
R G CC
Sbjct: 272 VKREGRVSSCC 282
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 139/251 (55%), Gaps = 54/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD + +ISTIG+DFKIKTV+L GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SF+++ WL+ ID +A V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDHDSFNDVKMWLQEIDRYATAGVLKLMVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ M+ YD+ E
Sbjct: 125 LQDKR----------------MVEYDVAKE------------------------------ 138
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG--RDPLEAPDRVTID-KK 242
A + F+ETSA + N+E+AF+ +A I + + +D + D+ ++ K
Sbjct: 139 -----FADSLQIPFLETSALDSSNVEEAFLTMAKQIKESMAQQHKDTGKKDDKANVNLKG 193
Query: 243 PDRGGMAGGCC 253
+GGCC
Sbjct: 194 QSLSNASGGCC 204
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 139/252 (55%), Gaps = 56/252 (22%)
Query: 5 TYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWD 64
++D+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWD
Sbjct: 2 SFDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWD 61
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
TAGQERF TIT+SYYRGA GI++VYDI++++SF+N+ +WL I+ +A E+V K+++G
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQWLLEIERYACENVNKLLVGNKS 121
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D + T Y +GI
Sbjct: 122 DRTAERAVEYDTAKEYADQLGI-------------------------------------- 143
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTS---GRDPLEAPDRVTIDK 241
F+ETSAK + N+E+AF+ +A I + S G P V I
Sbjct: 144 -------------PFLETSAKNSTNVEQAFLTMAGEIKRRLSHAVGTAAGAQPG-VRITS 189
Query: 242 KPDRGGMAGGCC 253
P + GCC
Sbjct: 190 TPVQ-PQKSGCC 200
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/255 (39%), Positives = 139/255 (54%), Gaps = 58/255 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L+GK IKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLEGKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ WL ID+ A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDATDMESFNNVKTWLSEIDKFASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + ++GI +
Sbjct: 125 LVTKKAVDTQMAKEFADSLGIPFL------------------------------------ 148
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-------DPLEAPDRVT 238
ETSAK N+E+AF+ +AT I + + + P P
Sbjct: 149 ---------------ETSAKEASNVEEAFVRMATDIKKRVAAQGANSGSGGPNSKPLLSG 193
Query: 239 IDKKPDRGGMAGGCC 253
+K G GGCC
Sbjct: 194 GNKPAGASGNKGGCC 208
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 179 bits (455), Expect = 8e-43, Method: Composition-based stats.
Identities = 105/253 (41%), Positives = 144/253 (56%), Gaps = 59/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T++++F+N+ +WL ID +A ++V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
HT V D T K +
Sbjct: 128 ------LHTKK------------VVDYTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK----TSGR----DPLEAPDRV 237
A + G+ F+ETSAK +N+E+AF+ +A I + +SG D ++P R
Sbjct: 143 ------ADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGNNESSDDEDSPPRG 196
Query: 238 TIDKKPDRGGMAG 250
T D G G
Sbjct: 197 TRDSGSSGTGKEG 209
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/239 (40%), Positives = 136/239 (56%), Gaps = 52/239 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++ YD+T+ +SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
Q+ T T + +GI
Sbjct: 125 LTSQKVVSTETAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEA-PDRVTIDKKP 243
F+ETSAK N+E+AF+ + AI + + + + P V I +P
Sbjct: 146 ------------PFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPTVQIRGQP 192
>gi|409046611|gb|EKM56091.1| hypothetical protein PHACADRAFT_257157 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 124/177 (70%), Gaps = 6/177 (3%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF++DAF +++STIG+DFKI+T+DL+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIDLEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TI +YYRGA GI++VYD+T+++S++N+ WL ID +A+E V K+ILG D
Sbjct: 65 AGQERFRTIAAAYYRGAHGIIVVYDVTDKESYENVKGWLTEIDRYASEGVLKLILGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITN-----EKSFDNILKWLRNIDEHANEDPQ 177
A + T + +GI L+ E +F + K ++ I + AN +P
Sbjct: 125 LAERRVVEHDTAKEFADQLGIPLLETSAKTSAGVEDAFIAMAKQVKEIVD-ANPEPS 180
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE---------D 175
DTAGQERF TI +YYRGA GI++VYD+T+++S++N+ WL ID +A+E
Sbjct: 63 DTAGQERFRTIAAAYYRGAHGIIVVYDVTDKESYENVKGWLTEIDRYASEGVLKLILGNK 122
Query: 176 PQVVNSWVCKH-RGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
+ V +H + A + G+ +ETSAK + +E AFI +A +
Sbjct: 123 SDLAERRVVEHDTAKEFADQLGIPLLETSAKTSAGVEDAFIAMAKQV 169
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 122/167 (73%), Gaps = 5/167 (2%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +WL+ ID +A E V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQWLQEIDRYAAEGVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVY----DITN-EKSFDNILKWLRN 167
++ T + + I L+ D TN E++F + K +++
Sbjct: 125 LVDKKAVETDQAKEFADGLSIPLLETSAKDATNVEQAFLTMAKQIKD 171
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 83/145 (57%), Gaps = 19/145 (13%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ +WL+ ID +A E VN +
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQWLQEIDRYAAEG---VNKLLV 119
Query: 185 KHRGEAI---------AREYG----VRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
++ + + A+E+ + +ETSAK N+E+AF+ +A I D+
Sbjct: 120 GNKSDLVDKKAVETDQAKEFADGLSIPLLETSAKDATNVEQAFLTMAKQIKDRMGSSMQQ 179
Query: 232 EAPDRVTI---DKKPDRGGMAGGCC 253
+ ++ T+ + +GGCC
Sbjct: 180 QQQNKSTVRVGQGAAVQPQQSGGCC 204
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 136/247 (55%), Gaps = 52/247 (21%)
Query: 7 DFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDTA 66
D+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDTA
Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 84
Query: 67 GQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKDT 126
GQERF TIT+SYYRGA GI++ YD+T+ +SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 85 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 144
Query: 127 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCKH 186
Q+ T T + +GI
Sbjct: 145 TSQKVVSTETAKAFADELGI---------------------------------------- 164
Query: 187 RGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDRG 246
F+ETSAK N+E+AF+ + AI + + + P T+ +
Sbjct: 165 -----------PFLETSAKNATNVEEAFMAMTAAIKTRMASQ-PAGGSKPPTVQIRGQPV 212
Query: 247 GMAGGCC 253
GCC
Sbjct: 213 NQQSGCC 219
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 142/254 (55%), Gaps = 55/254 (21%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
++ YD+LFK+LLIG+S VGK+ +L RF+D+ FN +F+ TIG+DFKI+T DL GK +KLQI
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQI 63
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT SYY+GA GI+LVYD+T+++SF ++ WL ++++ANE+V ++++G
Sbjct: 64 WDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVENWLAEVEKYANENVVRVLVGN 123
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D +
Sbjct: 124 KVDLESKRE--------------------------------------------------- 132
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT---SGRDPLEAPDRVTI 239
V G+ +A +RF+ETSAK + N+EKAFI LA I K S P++ R+T
Sbjct: 133 VTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKGSEAVPIKTGPRITP 192
Query: 240 DKKPDRGGMAGGCC 253
D++ + GCC
Sbjct: 193 DQQQNTVKDT-GCC 205
>gi|355714860|gb|AES05141.1| RAB1A, member RAS oncoprotein family [Mustela putorius furo]
Length = 195
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 80/141 (56%), Positives = 113/141 (80%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 54 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 113
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 114 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 173
Query: 126 TAGQERFHTITTSYYRGAMGI 146
++ T + ++GI
Sbjct: 174 LTTKKVVDYTTAKEFADSLGI 194
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 46/51 (90%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANED 175
DTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+
Sbjct: 112 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASEN 162
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 142/249 (57%), Gaps = 52/249 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL I+ +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEINRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ SY G K F
Sbjct: 125 LTTRR-----VVSYQTG-------------KDF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
A G+ F+ETSAK N+E+AF+ +A+ I + + + L T++ +
Sbjct: 140 ------ADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPALNTGKSGTVNVGGSQ 193
Query: 246 G-GMAGGCC 253
GCC
Sbjct: 194 PIPPKTGCC 202
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 146/248 (58%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L+ K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ WL I+++A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ VV++ + K
Sbjct: 125 LVTKK-----------------------------------------------VVDTQMAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+++ G+ F+ETSAK + N+E+AFI++A+ I + + ++ R + + P
Sbjct: 138 DFADSL----GIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKSVTRPNL-QNPPT 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 AKKDDSCC 200
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/223 (41%), Positives = 131/223 (58%), Gaps = 51/223 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T + +GI
Sbjct: 125 LTANKVVSYETAKAFADEIGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
FMETSAK N+E+AF+ +A I ++ + +
Sbjct: 146 ------------PFMETSAKNATNVEQAFMAMAAEIKNRMASQ 176
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 133/198 (67%), Gaps = 10/198 (5%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RFSDD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVY----DITN-EKSFDNILKWLRNIDEHANEDPQVVN 180
T + +GI + D TN E++F + +I E P N
Sbjct: 125 LTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAF---MAMSASIKERMASQPAGNN 181
Query: 181 S--WVCKHRGEAIAREYG 196
+ + RG+ +A++ G
Sbjct: 182 ARPPTVQIRGQPMAQKNG 199
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHA----------NE 174
DTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A N+
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLSEIDRYASDNVNKLLVGNK 122
Query: 175 DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
N V +A A E G+ FMETSAK N+E+AF+ ++ +I ++ + +
Sbjct: 123 SDLTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 235 DRVTIDKKPDRGGMAGGCC 253
T+ + GCC
Sbjct: 183 RPPTVQIRGQPMAQKNGCC 201
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 139/238 (58%), Gaps = 51/238 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L+ K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ WL I+++A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + ++GI
Sbjct: 125 LVTKKAVDTQMAKDFADSLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK + N+E+AFI++A+ I + + +++ R + P
Sbjct: 146 ------------PFLETSAKNSTNVEEAFIQMASGIKARLAVSGEVKSASRPNLQNPP 191
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
Length = 200
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 139/238 (58%), Gaps = 51/238 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L+ K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ WL I+++A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + ++GI
Sbjct: 125 LVTKKAVDTQMAKDFADSLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
F+ETSAK + N+E+AFI++A+ I + + +++ R + P
Sbjct: 146 ------------PFLETSAKNSTNVEEAFIQMASGIKARLAVSGEVKSASRPNLQNPP 191
>gi|384483936|gb|EIE76116.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 212
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 141/259 (54%), Gaps = 62/259 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI--- 62
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L+GK +KLQI
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIKNS 64
Query: 63 ------WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVE 116
WDTAGQERF TIT+SYYRGA GI++VYD+T++ SF ++ +WL+ ID +A E V
Sbjct: 65 LVISLQWDTAGQERFRTITSSYYRGAHGIIVVYDVTDDDSFQHVKQWLQEIDRYAAEGVN 124
Query: 117 KMILGKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDP 176
K+++G D ++ T E ANE
Sbjct: 125 KLLVGNKSDLTDKKVVST-----------------------------------EQANE-- 147
Query: 177 QVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKT-SGRDPLEAPD 235
+A + +ETSAK N+E+AF+ +A I D+ S +A
Sbjct: 148 --------------LAESIKIPLLETSAKDATNVEQAFLTMAKQIKDRMGSTMQQTQAKS 193
Query: 236 RVTIDKKPD-RGGMAGGCC 253
V + + AGGCC
Sbjct: 194 TVKVGQGASLEPKQAGGCC 212
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/200 (44%), Positives = 128/200 (64%), Gaps = 6/200 (3%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK +KL
Sbjct: 1 MTTPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TIT+SYYRGA GI++VYD+T+ ++ N+ +WL+ ID +A+++V K+++
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQWLQEIDRYASDNVNKLLV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI----LKWLRNIDEHANEDP 176
G D ++ S + +GI + T+ K+ N+ L R I E
Sbjct: 121 GNKSDRTNEKVVEYAVASEFAKQLGIPFLE--TSAKTALNVEQAFLTMAREIKERTGTAT 178
Query: 177 QVVNSWVCKHRGEAIAREYG 196
+ V G+A+ G
Sbjct: 179 KANKDTVVPKEGQALQSNSG 198
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 84/142 (59%), Gaps = 16/142 (11%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
DTAGQERF TIT+SYYRGA GI++VYD+T+ ++ N+ +WL+ ID +A+++ VN +
Sbjct: 64 DTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQWLQEIDRYASDN---VNKLLV 120
Query: 185 KHRGE---------AIAREY----GVRFMETSAKANINIEKAFIELATAIYDKTSGRDPL 231
++ + A+A E+ G+ F+ETSAK +N+E+AF+ +A I ++T
Sbjct: 121 GNKSDRTNEKVVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREIKERTGTATKA 180
Query: 232 EAPDRVTIDKKPDRGGMAGGCC 253
V + + + G CC
Sbjct: 181 NKDTVVPKEGQALQSNSGGNCC 202
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 136/248 (54%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L+GK +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +AN+ V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ ++T + +GI
Sbjct: 125 LVDNKVVDSLTAKAFADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK +I++E+AF+ + TA K G T+ K
Sbjct: 146 ------------PFLETSAKDSISVEQAFLTM-TAEIKKKMGSQTTAGKSAETVQMKGQP 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 IPQKSNCC 200
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 122/167 (73%), Gaps = 5/167 (2%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLV----YDITN-EKSFDNILKWLRN 167
A T + +GI + D TN EK+F + ++N
Sbjct: 125 LAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKN 171
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 10/139 (7%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQ------- 177
DTAGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+++
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNK 122
Query: 178 ---VVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
N V G+A A E G+ F+ETSAK N+EKAF+ +A I ++ + + + A
Sbjct: 123 CDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAMNAS 182
Query: 235 DRVTIDKKPDRGGMAGGCC 253
T+ + CC
Sbjct: 183 RPATVQMRGQPVTQKSSCC 201
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 144/256 (56%), Gaps = 68/256 (26%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L+ K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ WL I+++A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIEKYASENVNKILVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + ++GI
Sbjct: 125 LVTKKAVDTQMAKDFADSLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY--------DKTSGRDPLEAPDRV 237
F+ETSAK + N+E+AFI++A+ I K++ R L+ P V
Sbjct: 146 ------------PFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKSAARPNLQNPPTV 193
Query: 238 TIDKKPDRGGMAGGCC 253
KK D CC
Sbjct: 194 ---KKED------SCC 200
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 5 TYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWD 64
+YD LFK+LLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKIKT++++ K IKLQIWD
Sbjct: 4 SYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWD 63
Query: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTK 124
TAGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ W+ I+++A+EDV+K+++G
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKNWIIEIEKYASEDVQKILIGNKI 123
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVC 184
D LK RN V
Sbjct: 124 D------------------------------------LKNDRN---------------VS 132
Query: 185 KHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPD 244
G+ +A ++F+ETSAK N+E+AF +A I +K+ + + + ++ KP
Sbjct: 133 YEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLENQQKGRANINLNAKPI 192
Query: 245 RGGMAGGC 252
+ C
Sbjct: 193 KDNRKKCC 200
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 140/246 (56%), Gaps = 60/246 (24%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ +D LFK+LLIGDSG GK+C+L RF+++ F+ +ISTIG+DFKIKT+++ GK IK+
Sbjct: 1 MSTADFDLLFKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKM 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
Q+WDTAGQERF TIT SYYRG+ GI+LVYD+TN SFD+I W++ ID A DV ++I+
Sbjct: 61 QVWDTAGQERFRTITASYYRGSNGIILVYDVTNRDSFDHINYWMKEIDRLAAPDVCRLIV 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D + D +VV
Sbjct: 121 GNKSDLS-----------------------------------------------DKRVVT 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK---TSGRD------PL 231
+ G+++A++YGV F+ETSA N N+E+ F +A A+ K TSG + PL
Sbjct: 134 T----EEGQSLAQQYGVSFLETSALGNANVEEMFTAMAKAMRKKQGATSGGENGGNAVPL 189
Query: 232 EAPDRV 237
+ +V
Sbjct: 190 KPAKKV 195
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 137/252 (54%), Gaps = 52/252 (20%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
K YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T+DL GK +KLQI
Sbjct: 2 KPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQI 61
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT+SYYRGA GI++VYD+T+ SF+N+ W+ ID++A E V K+++G
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKNWMMEIDKYAMEGVSKLLVGN 121
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D + S+ G K F
Sbjct: 122 KCDLTSKR-----VVSFEEG-------------KEF------------------------ 139
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD-RVTIDK 241
A +RF+ETSAK N+E+AF +A+ I + P+ V I
Sbjct: 140 ---------ADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRPNANVRIGP 190
Query: 242 KPDRGGMAGGCC 253
++ GCC
Sbjct: 191 SQPVRNVSSGCC 202
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/251 (41%), Positives = 136/251 (54%), Gaps = 57/251 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DD++ ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T +SF+N+ +WL ID +ANE V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLSEIDRYANESVCKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ T T +GI
Sbjct: 125 LVENKVVDTQTGKALADELGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP---DRVTIDKK 242
F+ETSAK +IN+E+AF+ +A I K G P A V I +
Sbjct: 146 ------------PFLETSAKDSINVEQAFLTMAGEI-KKKMGNQPAGAKKTGSTVQIKGQ 192
Query: 243 PDRGGMAGGCC 253
P CC
Sbjct: 193 PIE--QKSNCC 201
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 137/201 (68%), Gaps = 10/201 (4%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVY----DITN-EKSFDNILKWLRNIDEHAN-EDPQVV 179
T + +GI + D TN E++F + ++ I+ AN + Q
Sbjct: 125 LEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIK-IEWQANLQTMQAS 183
Query: 180 NSWVCKHRGEAIAREYGVRFM 200
NS +G+ +A++ G +
Sbjct: 184 NS---ADQGQPVAQKGGAALL 201
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 72/107 (67%), Gaps = 10/107 (9%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERF TIT+SYYRGA GI++VYD+T+E+SF+N+ +WL ID +A+++ +
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK 122
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
N V +A A E G+ FMETSAK N+E+AF+ +A +I
Sbjct: 123 CDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI 169
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 140/248 (56%), Gaps = 52/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+T++L K IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T+ +SF+N+ WL ID++A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKTWLSEIDKYASENVNKILVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ T + ++GI
Sbjct: 125 LVTKKAVDTQMAKDFADSLGI--------------------------------------- 145
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
F+ETSAK + N+E+AFI++A+ I + + ++ R + + P
Sbjct: 146 ------------PFLETSAKNSTNVEEAFIQMASGIKTRLAVSGETKSVSRPNL-QNPPA 192
Query: 246 GGMAGGCC 253
CC
Sbjct: 193 PKKEDNCC 200
>gi|126343561|ref|XP_001362312.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/250 (37%), Positives = 142/250 (56%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFK+LLIGDSGVGK+C+L RF+DD ++ +++STIG+DFKI+T+ L GK +KLQIWDT
Sbjct: 5 YDYLFKVLLIGDSGVGKSCLLLRFADDTYSDSYVSTIGVDFKIRTIQLDGKIVKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYY GA GI+LVYD+++ KS+ N+ +WL ++ HAN + K+++G D
Sbjct: 65 AGQERFRTITSSYYHGAHGIILVYDVSDPKSYANVKQWLIEVERHANRNTNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +V+ + K
Sbjct: 125 LVTK-----------------------------------------------NMVDRTIAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
++I G+ F+ETSAK +IN+++ F+ +A+ I + P+ D +T + P
Sbjct: 138 EFADSI----GIPFLETSAKNSINVDEVFLTMASVIKKRIKAL-PVSTSDFPIITFNSSP 192
Query: 244 DRGGMAGGCC 253
+ +G CC
Sbjct: 193 VKSA-SGSCC 201
>gi|170038218|ref|XP_001846949.1| ras-related protein Rab-10 [Culex quinquefasciatus]
gi|167881762|gb|EDS45145.1| ras-related protein Rab-10 [Culex quinquefasciatus]
Length = 370
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 106/140 (75%), Gaps = 11/140 (7%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVV----- 179
DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI+KWLRNIDEHANED + +
Sbjct: 230 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVKWLRNIDEHANEDVEKMILGNK 289
Query: 180 -----NSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
V + RGE+IARE+ +RFMETSAKAN+NIEKAF ELA AI DKT+G++ + P
Sbjct: 290 CDMTDKRVVSQERGESIAREHDIRFMETSAKANVNIEKAFRELAEAILDKTAGKETTDNP 349
Query: 235 DRVTIDKK-PDRGGMAGGCC 253
DRV +++ D+ CC
Sbjct: 350 DRVVVNRGIGDKPPAYKACC 369
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/121 (69%), Positives = 93/121 (76%), Gaps = 5/121 (4%)
Query: 43 GIDFKIKTVDLKGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILK 102
GIDFKIKT++L+GKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNI+K
Sbjct: 209 GIDFKIKTIELRGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK 268
Query: 103 WLRNIDEHANEDVEKMILGKT-----KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKS 157
WLRNIDEHANEDVEKMILG K QER +I + M ++ EK+
Sbjct: 269 WLRNIDEHANEDVEKMILGNKCDMTDKRVVSQERGESIAREHDIRFMETSAKANVNIEKA 328
Query: 158 F 158
F
Sbjct: 329 F 329
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,998,010,134
Number of Sequences: 23463169
Number of extensions: 158256528
Number of successful extensions: 532837
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16552
Number of HSP's successfully gapped in prelim test: 6419
Number of HSP's that attempted gapping in prelim test: 472418
Number of HSP's gapped (non-prelim): 44742
length of query: 253
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 114
effective length of database: 9,097,814,876
effective search space: 1037150895864
effective search space used: 1037150895864
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)