BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9621
(253 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 279 bits (713), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/254 (61%), Positives = 167/254 (65%), Gaps = 56/254 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +V
Sbjct: 121 GNKCDM-----------------------------------------------EDKRV-- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
V K +GE IARE+ +RF ETSAKANINIEKAF+ LA I KT P++ PDR +D
Sbjct: 132 --VLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKT----PVKEPDRENVD 185
Query: 241 KKPDRGGMA-GGCC 253
GG CC
Sbjct: 186 ISTTGGGTGLKKCC 199
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 274 bits (700), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 167/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGID KIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D ED +VV
Sbjct: 121 GNKCDM-----------------------------------------------EDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 273 bits (697), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 273 bits (697), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 273 bits (697), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 153/255 (60%), Positives = 168/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAKANINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 271 bits (693), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/255 (59%), Positives = 167/255 (65%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNIDEHANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D +D +VV
Sbjct: 121 GNKCDM-----------------------------------------------DDKRVVP 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+G+RF ETSAK NINIEKAF+ LA I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>sp|P35281|RAB10_RAT Ras-related protein Rab-10 OS=Rattus norvegicus GN=Rab10 PE=1 SV=1
Length = 200
Score = 259 bits (663), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/255 (57%), Positives = 162/255 (63%), Gaps = 57/255 (22%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
MAKKTYD LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTI IDFKIKTV+L+GKKIKL
Sbjct: 1 MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERFHTITTSYYRGAMGIMLVYDITN KSF+NI KWLRNID+HANEDVE+M+L
Sbjct: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDQHANEDVERMLL 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
D +H P
Sbjct: 121 RNKCDM-------------------------------------------DHKRVVP---- 133
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTID 240
K +GE IARE+ +RF ETSAKANINIEKAF+ L I KT P++ P+ +D
Sbjct: 134 ----KGKGEQIAREHRIRFFETSAKANINIEKAFLTLPEDILRKT----PVKEPNSENVD 185
Query: 241 KKPDRG--GMAGGCC 253
G G CC
Sbjct: 186 ISSGGGVTGWKSKCC 200
>sp|Q5R4A3|RAB8A_PONAB Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1
Length = 207
Score = 247 bits (631), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 152/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
+D N+ Q V
Sbjct: 123 RD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>sp|P35280|RAB8A_RAT Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2
Length = 207
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>sp|P55258|RAB8A_MOUSE Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2
Length = 207
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>sp|Q4R5P1|RAB8A_MACFA Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2
SV=1
Length = 207
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>sp|P61006|RAB8A_HUMAN Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1
Length = 207
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>sp|P61007|RAB8A_CANFA Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1
Length = 207
Score = 244 bits (624), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
>sp|A4FV54|RAB8A_BOVIN Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1
Length = 207
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/231 (57%), Positives = 151/231 (65%), Gaps = 51/231 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------VNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAP 234
K RGE +A +YG++FMETSAKANIN+E AF LA I K + +P
Sbjct: 132 SKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSP 182
>sp|P22128|RAB8_DIPOM Ras-related protein Rab-8 OS=Diplobatis ommata PE=2 SV=1
Length = 210
Score = 242 bits (618), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 133/238 (55%), Positives = 156/238 (65%), Gaps = 55/238 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+TV+L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIM VYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D NE Q V
Sbjct: 123 CD----------------------------------------------MNEKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELA----TAIYDKTSGRDPLEAPDRV 237
K RGE +A +YG++F+ETSAK++IN+E+AFI LA T + K + EA D++
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKLNKKMNENSLQEAVDKL 189
>sp|Q5F470|RAB8A_CHICK Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1
Length = 207
Score = 239 bits (609), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 134/246 (54%), Positives = 154/246 (62%), Gaps = 57/246 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC LFRFS+DAFN TFISTIGIDFKI+T++L GK+IKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSF+NI W+RNI+EHA+ DVEKMILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D AN+ Q V
Sbjct: 123 CD----------------------------------------------ANDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIY----DKTSGRDPLEAPDRVTI 239
+ +GE +A +G++FMETSAKANINIE AF LA I K G P + V I
Sbjct: 132 SREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKI 191
Query: 240 DKKPDR 245
PD+
Sbjct: 192 --TPDQ 195
>sp|Q5REC9|RAB8B_PONAB Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1
Length = 207
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>sp|P70550|RAB8B_RAT Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1
Length = 207
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>sp|P61028|RAB8B_MOUSE Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1
Length = 207
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTK 172
>sp|Q92930|RAB8B_HUMAN Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2
Length = 207
Score = 238 bits (608), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+ETSAK++ N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTK 172
>sp|Q2HJI8|RAB8B_BOVIN Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1
Length = 207
Score = 238 bits (606), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 148/221 (66%), Gaps = 51/221 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
KTYD+LFKLLLIGDSGVGKTC+LFRFS+DAFNTTFISTIGIDFKI+T++L GKKIKLQIW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGIMLVYDITNEKSFDNI W+RNI+EHA+ DVE+MILG
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D N+ Q V
Sbjct: 123 CD----------------------------------------------MNDKRQ-----V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK 224
K RGE +A +YG++F+E SAK+++N+E+AF LA I K
Sbjct: 132 SKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTK 172
>sp|O24466|RAE1A_ARATH Ras-related protein RABE1a OS=Arabidopsis thaliana GN=RABE1A PE=1
SV=1
Length = 216
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 150/253 (59%), Gaps = 55/253 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA++ V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P K
Sbjct: 132 ------------------------------------------MDESKRAVP--------K 141
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D P + I++
Sbjct: 142 SKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQSDQG 201
Query: 246 GGMA-----GGCC 253
G + CC
Sbjct: 202 AGTSQATQKSACC 214
>sp|Q39433|RB1BV_BETVU Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1
Length = 215
Score = 214 bits (545), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 152/252 (60%), Gaps = 54/252 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP-LEAPDRVTI---DK 241
+G+A+A EYG++F ETSAK N+N+E+ F +A I + + D EA +TI D+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQ 201
Query: 242 KPDRGGMAGGCC 253
++ CC
Sbjct: 202 SGNQAAAKSACC 213
>sp|P28186|RAE1C_ARATH Ras-related protein RABE1c OS=Arabidopsis thaliana GN=RABE1C PE=1
SV=1
Length = 216
Score = 213 bits (541), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 112/254 (44%), Positives = 150/254 (59%), Gaps = 57/254 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFSD +F T+FI+TIGIDFKI+T++L GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W+RNI++HA+++V K+++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+DE P
Sbjct: 132 ------------------------------------------MDESKRAVPTA------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+G+A+A EYG++F ETSAK N+N+E+ F + I + S D P + I + D+
Sbjct: 143 -KGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRAEPATIKI-SQTDQ 200
Query: 246 GGMAG------GCC 253
AG CC
Sbjct: 201 AAGAGQATQKSACC 214
>sp|Q9DD03|RAB13_MOUSE Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=1 SV=1
Length = 202
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/245 (45%), Positives = 150/245 (61%), Gaps = 58/245 (23%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TVD++GK+IKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRQ---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
+ + E +ARE+ +RF ETSAK+++N+++AF LA I KT GR R + KP
Sbjct: 132 QREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGR-------RSGTNSKP 184
Query: 244 DRGGM 248
G+
Sbjct: 185 SSTGL 189
>sp|P51153|RAB13_HUMAN Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1
Length = 203
Score = 211 bits (536), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGNGNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>sp|Q5KTJ6|RAB13_MESAU Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2
SV=1
Length = 203
Score = 211 bits (536), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 148/240 (61%), Gaps = 51/240 (21%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDFKI+TV+++GK+IKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKP 243
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + D KP
Sbjct: 132 LKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKSGGRRSGNHSKPSSTDLKP 191
>sp|Q58DS5|RAB13_BOVIN Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1
Length = 203
Score = 210 bits (534), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/244 (46%), Positives = 151/244 (61%), Gaps = 56/244 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN T+ISTIGIDF+I+TVD++GKKIKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR-----DPLEAPDRVT 238
K + + +ARE+G+RF ETSAK+++N+++AF LA I K+ GR + + D T
Sbjct: 132 QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLKNNNKPPSTDLKT 191
Query: 239 IDKK 242
DKK
Sbjct: 192 CDKK 195
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 208 bits (530), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/225 (47%), Positives = 144/225 (64%), Gaps = 51/225 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K YD LFKLLLIGDSGVGKTC++ RF++D FN+T+ISTIGIDFKI+TV+++GK+IKLQ+W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVW 62
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYDIT+EKSF+NI W+++I E+A+ VE+++LG
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNK 122
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D + + V
Sbjct: 123 CDMEAKRK---------------------------------------------------V 131
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR 228
+ + E +ARE+ +RF ETSAK+++N+++AF LA I KT GR
Sbjct: 132 QREQAERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLKTGGR 176
>sp|P20791|RAB8B_DICDI Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B
PE=2 SV=1
Length = 203
Score = 208 bits (529), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/216 (49%), Positives = 142/216 (65%), Gaps = 51/216 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YDFL KLLLIGDSGVGK+C+L RFSD +F +FI+TIGIDFKI+T++L+GK+IKLQIWDT
Sbjct: 12 YDFLVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+EKSF +I W+RNI++HA++ V KM++G
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNK-- 129
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K D+
Sbjct: 130 ------------------------CDMTEKKVVDS------------------------- 140
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
RG+++A EYG++F+ETSAK ++N+E+AFI LA I
Sbjct: 141 SRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDI 176
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 204 bits (520), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 140/221 (63%), Gaps = 51/221 (23%)
Query: 1 MAKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKL 60
M+ K+YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L GK+IKL
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKL 60
Query: 61 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMIL 120
QIWDTAGQERF TITT+YYRGAMGI+L+YD+T++KSFDN+ W N+++HA+E+V K+++
Sbjct: 61 QIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILI 120
Query: 121 GKTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVN 180
G D Q +
Sbjct: 121 GNKCDCEDQRQ------------------------------------------------- 131
Query: 181 SWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAI 221
V +G+A+A E GV+F+E SAK N+N+++AF LA I
Sbjct: 132 --VSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>sp|P36861|YPTV2_VOLCA GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1
Length = 217
Score = 201 bits (510), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 139/225 (61%), Gaps = 50/225 (22%)
Query: 3 KKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQI 62
+ YD L KLLL+GDSGVGK+C+L RF+DD F ++FI+TIGIDFKIK VD+ GK +KLQI
Sbjct: 7 RPDYDALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQI 66
Query: 63 WDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGK 122
WDTAGQERF TIT++YYRGA GI+LVYDIT+E SF+N+ W+RNI++HA+++V K+++G
Sbjct: 67 WDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGN 126
Query: 123 TKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSW 182
D A +R +I
Sbjct: 127 KLDLAEDKRVVSIA---------------------------------------------- 140
Query: 183 VCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSG 227
RG+A+A E+G RF ETSAK N+++E+AFI +A + + G
Sbjct: 141 ----RGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEG 181
>sp|Q9LZD4|RAE1D_ARATH Ras-related protein RABE1d OS=Arabidopsis thaliana GN=RABE1D PE=1
SV=1
Length = 216
Score = 200 bits (509), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 112/256 (43%), Positives = 151/256 (58%), Gaps = 54/256 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKI+TV+L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI++HA+++V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPTA--- 142
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N+N+E F+ +A I + + D P + I K
Sbjct: 143 -----KGQALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKAEPQGIKITK 197
Query: 242 KPDRGGMA----GGCC 253
+ + CC
Sbjct: 198 QDTAASSSTAEKSACC 213
>sp|Q9SF91|RAE1E_ARATH Ras-related protein RABE1e OS=Arabidopsis thaliana GN=RABE1E PE=1
SV=1
Length = 218
Score = 199 bits (506), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/241 (45%), Positives = 147/241 (60%), Gaps = 50/241 (20%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
A+ YD+L KLLLIGDSGVGK+C+L RFSDD F T+FI+TIGIDFKI+TV+L GK+IKLQ
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQ 67
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
IWDTAGQERF TITT+YYRGAMGI+LVYD+T+E SF+NI W++NI++HA++ V K+++G
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVG 127
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE P
Sbjct: 128 NKAD------------------------------------------MDESKRAVPT---- 141
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDK 241
+G+A+A EYG++F ETSAK N N+E+ F+ +A I + + D P + I K
Sbjct: 142 ----SKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQGIKITK 197
Query: 242 K 242
+
Sbjct: 198 Q 198
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 196 bits (498), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/248 (41%), Positives = 142/248 (57%), Gaps = 51/248 (20%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD++ ++ISTIG+DFKI+TV+ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
A N V
Sbjct: 125 LAE---------------------------------------------------NRVVSY 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
G+A+A E G+ F+ETSAK N+EKAF+ +A I ++ + + A T+ +
Sbjct: 134 EAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPATVQMRGQP 193
Query: 246 GGMAGGCC 253
CC
Sbjct: 194 VAQQSSCC 201
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 132/180 (73%), Gaps = 6/180 (3%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+L KLLLIGDSGVGK+C+L RFS+D+F +FI+TIGIDFKI+T++L+GK+IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA + V KM++G D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCD 131
Query: 126 TAGQE-----RFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRN-IDEHANEDPQVV 179
A ++ R ++ Y + I E++F ++ K ++ + + NE PQVV
Sbjct: 132 MAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPNEQPQVV 191
Score = 121 bits (304), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 19/127 (14%)
Query: 125 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANE---------- 174
DTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF NI W+RNI++HA +
Sbjct: 70 DTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNK 129
Query: 175 ----DPQVVNSWVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDP 230
+ +VV+S RG+++A EYG++F+ETSAK +IN+E+AFI LA I K P
Sbjct: 130 CDMAEKKVVDS----SRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDI-KKRMIDTP 184
Query: 231 LEAPDRV 237
E P V
Sbjct: 185 NEQPQVV 191
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 144/232 (62%), Gaps = 54/232 (23%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+++TYD L KLLLIGDSGVGK+C+L RF +D F +FI+TIGIDFKI+T+D+ +++KLQ
Sbjct: 4 SQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQ 63
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+LVYD+T+EKSF+NI W +N+ +ANE VE +++G
Sbjct: 64 VWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVG 123
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D +DE +VV++
Sbjct: 124 NKCD------------------------------------------LDEK-----RVVST 136
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYD---KTSGRDP 230
+G+A+A ++G+ F+E S+K NIN+E+ F +AT I D KT G +
Sbjct: 137 ----EQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKGNES 184
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 145/252 (57%), Gaps = 58/252 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSD 127
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K +
Sbjct: 128 LTTKK------------------VVDFTTAKEY--------------------------- 142
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD----RVTIDK 241
A + G+ F+ETSAK N+E+AF+ +A I ++ P+ A V I+
Sbjct: 143 ------ADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMG---PITAASDSKPSVKINS 193
Query: 242 KPDRGGMAGGCC 253
GGCC
Sbjct: 194 STPVSANKGGCC 205
>sp|P0CY30|SEC4_CANAX Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1
Length = 210
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGK+IKLQ
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE VN
Sbjct: 127 NKCD-------------------------------------------DE--------VNR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD---PLEAPDRVT 238
V K +G+ +A + V F+E SAK+N N++ F ELA+ I +K + A
Sbjct: 136 QVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHVEENIGGVGGASGAGG 195
Query: 239 IDKKPDRGGMAGGCC 253
ID + G CC
Sbjct: 196 IDVSQNNSGAKNNCC 210
>sp|C4YL11|SEC4_CANAW Ras-related protein SEC4 OS=Candida albicans (strain WO-1) GN=SEC4
PE=3 SV=1
Length = 210
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGK+IKLQ
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE VN
Sbjct: 127 NKCD-------------------------------------------DE--------VNR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD---PLEAPDRVT 238
V K +G+ +A + V F+E SAK+N N++ F ELA+ I +K + A
Sbjct: 136 QVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHVEENIGGVGGASGAGG 195
Query: 239 IDKKPDRGGMAGGCC 253
ID + G CC
Sbjct: 196 IDVSQNNSGAKNNCC 210
>sp|P0CY31|SEC4_CANAL Ras-related protein SEC4 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SEC4 PE=3 SV=1
Length = 210
Score = 191 bits (486), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 2 AKKTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQ 61
+ + YD + KLLL+GDSGVGK+C+L RF +D FN +FI+TIGIDFKI+T++ KGK+IKLQ
Sbjct: 7 SSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQ 66
Query: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILG 121
+WDTAGQERF TITT+YYRGAMGI+L+YD+T+ +SF+N+ W + + +HANED + ++G
Sbjct: 67 VWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVG 126
Query: 122 KTKDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNS 181
D DE VN
Sbjct: 127 NKCD-------------------------------------------DE--------VNR 135
Query: 182 WVCKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD---PLEAPDRVT 238
V K +G+ +A + V F+E SAK+N N++ F ELA+ I +K + A
Sbjct: 136 QVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEKHVEENIGGVGGASGAGG 195
Query: 239 IDKKPDRGGMAGGCC 253
ID + G CC
Sbjct: 196 IDVSQNNSGAKNNCC 210
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 191 bits (484), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF T+T+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKSA-SGGCC 201
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 191 bits (484), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 149/253 (58%), Gaps = 59/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+TV+L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T++K VV V K
Sbjct: 124 -------------------------DLTSKK---------------------VVEYSVAK 137
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRD-PLEAPDRVTIDKKPD 244
A A E G+ F+ETSAK N+E+AF+ +A I ++ + + P +A V +P
Sbjct: 138 ----AFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTKAGGPVV---RPQ 190
Query: 245 RG----GMAGGCC 253
G + CC
Sbjct: 191 EGKPINSKSSSCC 203
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 191 bits (484), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/250 (42%), Positives = 145/250 (58%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A GV F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ +GGCC
Sbjct: 193 VKPA-SGGCC 201
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 190 bits (483), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/251 (41%), Positives = 144/251 (57%), Gaps = 55/251 (21%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDS VGK+C+L RF+DDA+ ++ISTIG+DFKI+T++ GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD T +SF+N+ +WL ID +ANE V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKND 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
+ +VV++
Sbjct: 125 MV-----------------------------------------------ESKVVST---- 133
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGR---DPLEAPDRVTIDKK 242
G A+A E G+ F+ETSAK +IN+E+AF+ +A I K + + P V + +
Sbjct: 134 ETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQ 193
Query: 243 PDRGGMAGGCC 253
P + GGCC
Sbjct: 194 PIQQN-NGGCC 203
>sp|O42819|SEC4_CANGA Ras-related protein SEC4 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC4 PE=3
SV=1
Length = 215
Score = 190 bits (482), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 140/232 (60%), Gaps = 53/232 (22%)
Query: 4 KTYDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIW 63
K+YD + K+LLIGDSGVGK+C+L RF +D FN +FI+TIGIDFKIKTVD+ GKK+KLQ+W
Sbjct: 15 KSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLW 74
Query: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKT 123
DTAGQERF TITT+YYRGAMGI+LVYD+T+E++F NI +W + ++EHAN++ + +++G
Sbjct: 75 DTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQWFKTVNEHANDEAQLLLVGNK 134
Query: 124 KDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWV 183
D D +V V
Sbjct: 135 SDM------------------------------------------------DTRV----V 142
Query: 184 CKHRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPD 235
+GEA+A+E G+ F+E+SAK + N+ + F LA I +K + L P+
Sbjct: 143 TYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQEKIDS-NKLSGPN 193
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 144/253 (56%), Gaps = 60/253 (23%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++SF+N+ +WL+ ID +A+E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D T K F
Sbjct: 125 LTTKK------------------VVDYTTAKEF--------------------------- 139
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDK-----TSGRDPLEAPDRVTID 240
A G+ F+ETSAK N+E+AF+ +A I + TSG V I
Sbjct: 140 ------ADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSE---KSNVNIQ 190
Query: 241 KKPDRGGMAGGCC 253
P + GGCC
Sbjct: 191 STPVKSS-GGGCC 202
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/254 (40%), Positives = 146/254 (57%), Gaps = 62/254 (24%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
Y +LFKLLLIGDSGVGK+C+L RF+DD ++ +FISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T++ +F+N+ +WL+ ID A E+V K+++G D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSD 124
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
++ V D K+F + L+
Sbjct: 125 LVAKK------------------VVDFNTAKAFADSLQ---------------------- 144
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDRVTIDKKPDR 245
+ F+ETSAK + N+E+AF+ +AT I ++ + P + T+DK
Sbjct: 145 -----------IPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPTQ-----TVDKNKVV 188
Query: 246 GGMAG------GCC 253
G + GCC
Sbjct: 189 PGSSAPISPKSGCC 202
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 144/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKQA-GGGCC 201
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 189 bits (480), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 144/250 (57%), Gaps = 55/250 (22%)
Query: 6 YDFLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVDLKGKKIKLQIWDT 65
YD+LFKLLLIGDSGVGK+C+L RF+DD + ++ISTIG+DFKI+T++L GK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 66 AGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDVEKMILGKTKD 125
AGQERF TIT+SYYRGA GI++VYD+T+++S+ N+ +WL+ ID +A+E+V K+++G
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKS- 123
Query: 126 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNILKWLRNIDEHANEDPQVVNSWVCK 185
D+T +K DN
Sbjct: 124 -------------------------DLTTKKVVDNT------------------------ 134
Query: 186 HRGEAIAREYGVRFMETSAKANINIEKAFIELATAIYDKTSGRDPLEAPDR--VTIDKKP 243
+ A G+ F+ETSAK N+E+AF+ +A I K G +R + ID P
Sbjct: 135 -TAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMGPGAASGGERPNLKIDSTP 192
Query: 244 DRGGMAGGCC 253
+ GGCC
Sbjct: 193 VKPA-GGGCC 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,103,821
Number of Sequences: 539616
Number of extensions: 3819767
Number of successful extensions: 15352
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 12238
Number of HSP's gapped (non-prelim): 2187
length of query: 253
length of database: 191,569,459
effective HSP length: 115
effective length of query: 138
effective length of database: 129,513,619
effective search space: 17872879422
effective search space used: 17872879422
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)