BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9625
(394 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O00291|HIP1_HUMAN Huntingtin-interacting protein 1 OS=Homo sapiens GN=HIP1 PE=1 SV=5
Length = 1037
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 117/166 (70%), Gaps = 4/166 (2%)
Query: 179 EIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERL 238
EI+ + G+AS +EFY +N +WTEGLISA+KAV A ++ AAD VV G K E L
Sbjct: 847 EIVESGRGTAS-PKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGR--GKFEEL 903
Query: 239 IVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDES 298
+V SH +AASTAQLV AS+VKA+++S +LA L QASR V AT VVA+ + ++E+
Sbjct: 904 MVCSHEIAASTAQLVAASKVKADKDSPNLAQLQQASRGVNQATAGVVASTISGKSQIEET 963
Query: 299 ADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRHH 344
D++D +S++L Q +R EM++QVRVLELE L+KER KL LR+ H
Sbjct: 964 -DNMDFSSMTLTQIKRQEMDSQVRVLELENELQKERQKLGELRKKH 1008
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 111/170 (65%), Gaps = 21/170 (12%)
Query: 1 MLTQSRRADTGVKLEVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQ 60
ML++SR DTGVKLEVNE+IL CT+LM+AI++L+ S D Q
Sbjct: 804 MLSKSRAGDTGVKLEVNERILGCCTSLMQAIQVLIVASKD------------------LQ 845
Query: 61 AEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLER 120
EI+ + G+AS +EFY +N +WTEGLISA+KAV A ++ AAD VV G K E
Sbjct: 846 REIVESGRGTAS-PKEFYAKNSRWTEGLISASKAVGWGATVMVDAADLVVQGR--GKFEE 902
Query: 121 LIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVAT 170
L+V SH +AASTAQLV AS+VKA+++S +LA L QASR V AT VVA+
Sbjct: 903 LMVCSHEIAASTAQLVAASKVKADKDSPNLAQLQQASRGVNQATAGVVAS 952
>sp|Q02328|SLAP2_CAEEL Huntington interacting protein related 1 OS=Caenorhabditis elegans
GN=hipr-1 PE=3 SV=3
Length = 927
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 115/167 (68%), Gaps = 6/167 (3%)
Query: 179 EIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERL 238
EI+ A S EFYKRNHQWTEGL+SAAKAV ++A+ L+ +AD VV+G K E L
Sbjct: 749 EIVAAGKAGGSPA-EFYKRNHQWTEGLLSAAKAVGVAARVLVESADGVVTG--KGKFEHL 805
Query: 239 IVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTC-IHLVDE 297
IVA+ +AASTAQL V+SRVKA+++S L ALS A++ V T VVA K L DE
Sbjct: 806 IVAAQEIAASTAQLFVSSRVKADKDSSKLDALSVAAKAVNQNTAQVVAAVKNGQTTLNDE 865
Query: 298 SADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRHH 344
+ LD + LSLH A++ EME+QV++LELE L +ER KL+ALR+ H
Sbjct: 866 GS--LDFSYLSLHAAKKEEMESQVKMLELEQSLNQERAKLAALRKQH 910
Score = 127 bits (320), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 103/170 (60%), Gaps = 21/170 (12%)
Query: 4 QSRRADTGVKLEVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEI 63
++R + G++LEVNE IL +C LM I LV IAS L Q EI
Sbjct: 709 RARESSDGIRLEVNESILANCQALMSVIMQLV--------IASREL----------QTEI 750
Query: 64 IMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIV 123
+ A S EFYKRNHQWTEGL+SAAKAV ++A+ L+ +AD VV+G K E LIV
Sbjct: 751 VAAGKAGGSPA-EFYKRNHQWTEGLLSAAKAVGVAARVLVESADGVVTG--KGKFEHLIV 807
Query: 124 ASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKT 173
A+ +AASTAQL V+SRVKA+++S L ALS A++ V T VVA K
Sbjct: 808 AAQEIAASTAQLFVSSRVKADKDSSKLDALSVAAKAVNQNTAQVVAAVKN 857
>sp|Q8VD75|HIP1_MOUSE Huntingtin-interacting protein 1 OS=Mus musculus GN=Hip1 PE=1 SV=2
Length = 1029
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 114/166 (68%), Gaps = 4/166 (2%)
Query: 179 EIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERL 238
EI+ + G+AS +EFY +N +WTEGLISA+KAV A ++ AAD VV G K E L
Sbjct: 839 EIVESGRGTAS-PKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGK--GKFEEL 895
Query: 239 IVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDES 298
+V S +AASTAQLV AS+VKA + S++L L QASR V AT +VVA+ + ++E+
Sbjct: 896 MVCSREIAASTAQLVAASKVKANKGSLNLTQLQQASRGVNQATAAVVASTISGKSQIEET 955
Query: 299 ADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRHH 344
D +D +S++L Q +R EM++QVRVLELE L+KER KL LR+ H
Sbjct: 956 -DSMDFSSMTLTQIKRQEMDSQVRVLELENDLQKERQKLGELRKKH 1000
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 110/170 (64%), Gaps = 21/170 (12%)
Query: 1 MLTQSRRADTGVKLEVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQ 60
+L++SR DTGVKLEVNE+IL SCT+LM+AI++LV S D Q
Sbjct: 796 ILSKSRAGDTGVKLEVNERILGSCTSLMQAIKVLVVASKD------------------LQ 837
Query: 61 AEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLER 120
EI+ + G+AS +EFY +N +WTEGLISA+KAV A ++ AAD VV G K E
Sbjct: 838 KEIVESGRGTAS-PKEFYAKNSRWTEGLISASKAVGWGATIMVDAADLVVQGK--GKFEE 894
Query: 121 LIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVAT 170
L+V S +AASTAQLV AS+VKA + S++L L QASR V AT +VVA+
Sbjct: 895 LMVCSREIAASTAQLVAASKVKANKGSLNLTQLQQASRGVNQATAAVVAS 944
>sp|Q9JKY5|HIP1R_MOUSE Huntingtin-interacting protein 1-related protein OS=Mus musculus
GN=Hip1r PE=1 SV=2
Length = 1068
Score = 143 bits (360), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 112/173 (64%), Gaps = 21/173 (12%)
Query: 1 MLTQSRRADTGVKLEVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQ 60
M++Q+R +GVKLEVNE+IL+SCT LMKAIR+LV + S SL Q
Sbjct: 804 MMSQARHESSGVKLEVNERILNSCTDLMKAIRLLV--------MTSTSL----------Q 845
Query: 61 AEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLER 120
EI+ + G+A+ +EFY +N +WTEGLISA+KAV A L+ +AD+VV K E
Sbjct: 846 KEIVESGRGAATQ-QEFYAKNSRWTEGLISASKAVGWGATQLVESADKVVL--HMGKYEE 902
Query: 121 LIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKT 173
LIV SH +AASTAQLV AS+VKA +NS HL+ L + SR V +VVA+ K+
Sbjct: 903 LIVCSHEIAASTAQLVAASKVKANKNSPHLSRLQECSRTVNERAANVVASTKS 955
Score = 141 bits (356), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 111/168 (66%), Gaps = 4/168 (2%)
Query: 179 EIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERL 238
EI+ + G+A+ +EFY +N +WTEGLISA+KAV A L+ +AD+VV K E L
Sbjct: 847 EIVESGRGAATQ-QEFYAKNSRWTEGLISASKAVGWGATQLVESADKVVL--HMGKYEEL 903
Query: 239 IVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDES 298
IV SH +AASTAQLV AS+VKA +NS HL+ L + SR V +VVA+ K+ + E
Sbjct: 904 IVCSHEIAASTAQLVAASKVKANKNSPHLSRLQECSRTVNERAANVVASTKSGQEQI-ED 962
Query: 299 ADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRHHLL 346
D +D + LSL + ++ EME QVRVLELE LE ER++L LR+ H +
Sbjct: 963 RDTMDFSGLSLIKLKKQEMETQVRVLELEKTLEAERVRLGELRKQHYV 1010
>sp|O75146|HIP1R_HUMAN Huntingtin-interacting protein 1-related protein OS=Homo sapiens
GN=HIP1R PE=1 SV=2
Length = 1068
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 111/173 (64%), Gaps = 21/173 (12%)
Query: 1 MLTQSRRADTGVKLEVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQ 60
M+ Q+R A +GVKLEVNE+IL+SCT LMKAIR+LV S SL Q
Sbjct: 804 MMNQARHASSGVKLEVNERILNSCTDLMKAIRLLV--------TTSTSL----------Q 845
Query: 61 AEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLER 120
EI+ + G+A+ +EFY +N +WTEGLISA+KAV A L+ AAD+VV K E
Sbjct: 846 KEIVESGRGAATQ-QEFYAKNSRWTEGLISASKAVGWGATQLVEAADKVVL--HTGKYEE 902
Query: 121 LIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKT 173
LIV SH +AASTAQLV AS+VKA ++S HL+ L + SR V +VVA+ K+
Sbjct: 903 LIVCSHEIAASTAQLVAASKVKANKHSPHLSRLQECSRTVNERAANVVASTKS 955
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 111/168 (66%), Gaps = 4/168 (2%)
Query: 179 EIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERL 238
EI+ + G+A+ +EFY +N +WTEGLISA+KAV A L+ AAD+VV K E L
Sbjct: 847 EIVESGRGAATQ-QEFYAKNSRWTEGLISASKAVGWGATQLVEAADKVVL--HTGKYEEL 903
Query: 239 IVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDES 298
IV SH +AASTAQLV AS+VKA ++S HL+ L + SR V +VVA+ K+ + E
Sbjct: 904 IVCSHEIAASTAQLVAASKVKANKHSPHLSRLQECSRTVNERAANVVASTKSGQEQI-ED 962
Query: 299 ADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRHHLL 346
D +D + LSL + ++ EME QVRVLELE LE ER++L LR+ H +
Sbjct: 963 RDTMDFSGLSLIKLKKQEMETQVRVLELEKTLEAERMRLGELRKQHYV 1010
>sp|Q9P6L5|SLA2_SCHPO Endocytosis protein end4 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=end4 PE=1 SV=2
Length = 1102
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 116/195 (59%), Gaps = 7/195 (3%)
Query: 148 VHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLIS 207
VH + LS AS +T A ++ A AEI+ GS+S FYK++++WTEGLIS
Sbjct: 907 VHDSLLS-ASIAITEAIARLIKAATAS--QAEIVAQGRGSSSRG-AFYKKHNRWTEGLIS 962
Query: 208 AAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHL 267
AAKAVA + L+ AD VV+G + E LIVA +GV+A+TAQLV ASRVKA S
Sbjct: 963 AAKAVARATTTLIETADGVVNG--TSSFEHLIVACNGVSAATAQLVAASRVKANFASKVQ 1020
Query: 268 AALSQASRDVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEMEAQVRVLELE 327
L A++ VT A ++V ++ + L + D +SL +H+ RR E+E QV++L+LE
Sbjct: 1021 DHLEDAAKAVTEACKALVRQVES-VALKAKEVQHEDFSSLGVHEYRRKEIEQQVQILKLE 1079
Query: 328 AGLEKERLKLSALRR 342
L R +L +R+
Sbjct: 1080 NDLVAARRRLFDMRK 1094
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 59 AQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKL 118
+QAEI+ GS+S FYK++++WTEGLISAAKAVA + L+ AD VV+G +
Sbjct: 932 SQAEIVAQGRGSSSRG-AFYKKHNRWTEGLISAAKAVARATTTLIETADGVVNG--TSSF 988
Query: 119 ERLIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVV 168
E LIVA +GV+A+TAQLV ASRVKA S L A++ VT A ++V
Sbjct: 989 EHLIVACNGVSAATAQLVAASRVKANFASKVQDHLEDAAKAVTEACKALV 1038
>sp|Q54K81|TALB_DICDI Talin-B OS=Dictyostelium discoideum GN=talB PE=2 SV=1
Length = 2614
Score = 105 bits (262), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 114/190 (60%), Gaps = 9/190 (4%)
Query: 155 QASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAM 214
+A+R +T+ATG +V A H E+++A G N Y+R+ W GLISAA+AVA
Sbjct: 2276 EAARAITSATGVLVQCATNVQH--ELVLA--GKVGNKGNMYRRDPTWARGLISAAQAVAG 2331
Query: 215 SAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLAALSQAS 274
S + L+ +A+ G E+L+ ++ GVAA+TA+LV ASR KA+ NS + L+QA+
Sbjct: 2332 SVQGLVHSANSSSQGK--VDEEQLVASAKGVAAATARLVTASRAKADLNSASNSQLAQAA 2389
Query: 275 RDVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKER 334
+ V+NAT ++V AK + +E + D +LS Q EM+ Q+++L+L+ LE+
Sbjct: 2390 KQVSNATAALVEAAK---QVNEEPEVEFDTTNLSNAQIISKEMDQQIQILKLKKELEQAE 2446
Query: 335 LKLSALRRHH 344
KL ++R+
Sbjct: 2447 KKLFSIRKKE 2456
Score = 79.0 bits (193), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 87/165 (52%), Gaps = 22/165 (13%)
Query: 16 VNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTR 75
++E IL++ + A +LVQ Q E+++A G N
Sbjct: 2270 IDESILEAARAITSATGVLVQ------------------CATNVQHELVLA--GKVGNKG 2309
Query: 76 EFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQL 135
Y+R+ W GLISAA+AVA S + L+ +A+ G E+L+ ++ GVAA+TA+L
Sbjct: 2310 NMYRRDPTWARGLISAAQAVAGSVQGLVHSANSSSQGK--VDEEQLVASAKGVAAATARL 2367
Query: 136 VVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEI 180
V ASR KA+ NS + L+QA++ V+NAT ++V AK E+
Sbjct: 2368 VTASRAKADLNSASNSQLAQAAKQVSNATAALVEAAKQVNEEPEV 2412
>sp|P33338|SLA2_YEAST Protein SLA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SLA2 PE=1 SV=5
Length = 968
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 86/156 (55%), Gaps = 7/156 (4%)
Query: 193 EFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSG--GEGAKLERLIVASHGVAASTA 250
+FY +N +WTEGLISAAKAVA + L+T A ++++ E E+ IVAS VAAST
Sbjct: 807 QFYLKNSRWTEGLISAAKAVAGATNVLITTASKLITSEDNENTSPEQFIVASKEVAASTI 866
Query: 251 QLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCI---HLVDESADDLDIASL 307
QLV ASRVK +S L S+DVT+A S+ I H + LD
Sbjct: 867 QLVAASRVKTSIHSKAQDKLEHCSKDVTDACRSLGNHVMGMIEDDHSTSQQQQPLDFT-- 924
Query: 308 SLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRH 343
S H + EME QV +L+LE L R +L +RRH
Sbjct: 925 SEHTLKTAEMEQQVEILKLEQSLSNARKRLGEIRRH 960
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 76 EFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSG--GEGAKLERLIVASHGVAASTA 133
+FY +N +WTEGLISAAKAVA + L+T A ++++ E E+ IVAS VAAST
Sbjct: 807 QFYLKNSRWTEGLISAAKAVAGATNVLITTASKLITSEDNENTSPEQFIVASKEVAASTI 866
Query: 134 QLVVASRVKAERNSVHLAALSQASRDVTNATGSV 167
QLV ASRVK +S L S+DVT+A S+
Sbjct: 867 QLVAASRVKTSIHSKAQDKLEHCSKDVTDACRSL 900
>sp|P0CE95|TALA1_DICDI Talin-A OS=Dictyostelium discoideum GN=talA PE=1 SV=1
Length = 2492
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 6/156 (3%)
Query: 195 YKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVV 254
YK + W+ GLISAAK V + L+ AA + +G A+ E LI + VAA+TA LV
Sbjct: 2339 YKADPTWSNGLISAAKGVGAATHRLVEAAMKSATG--KAEEEELIATARSVAAATALLVS 2396
Query: 255 ASRVKAERNSVHLAA---LSQASRDVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQ 311
ASR K+ + AA LS A+R V +AT +VA AK + DE + + +
Sbjct: 2397 ASRAKSGDDYQSQAAHSHLSTAARQVASATSDLVAAAKAAT-IFDEQQQEEEQEQFNFTG 2455
Query: 312 ARRLEMEAQVRVLELEAGLEKERLKLSALRRHHLLK 347
++ E+E Q+++L+LE LE R ++ R+ + K
Sbjct: 2456 SKVKELEQQMKILKLEKELETARRQMLNSRKQNYNK 2491
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 78 YKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVV 137
YK + W+ GLISAAK V + L+ AA + +G A+ E LI + VAA+TA LV
Sbjct: 2339 YKADPTWSNGLISAAKGVGAATHRLVEAAMKSATG--KAEEEELIATARSVAAATALLVS 2396
Query: 138 ASRVKAERNSVHLAA---LSQASRDVTNATGSVVATAK 172
ASR K+ + AA LS A+R V +AT +VA AK
Sbjct: 2397 ASRAKSGDDYQSQAAHSHLSTAARQVASATSDLVAAAK 2434
>sp|P26039|TLN1_MOUSE Talin-1 OS=Mus musculus GN=Tln1 PE=1 SV=2
Length = 2541
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 88/164 (53%), Gaps = 10/164 (6%)
Query: 198 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 257
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2386 DGQWSQGLISAARMVAAATNNLCEAANAAVQGH--ASQEKLISSAKQVAASTAQLLVACK 2443
Query: 258 VKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEM 317
VKA+++S + L A V A+ ++V A+ D+ + + + + ++ +
Sbjct: 2444 VKADQDSEAMKRLQAAGNAVKRASDNLVKAAQKAAAFEDQENETVVVKEKMVGGIAQI-I 2502
Query: 318 EAQVRVLELEAGLEKERLKLSALRRHHLLKKKIVYLALFQEIRD 361
AQ +L E LE+ R KL+ +R+ Y L E+RD
Sbjct: 2503 AAQEEMLRKERELEEARKKLAQIRQQQ-------YKFLPSELRD 2539
>sp|Q9Y490|TLN1_HUMAN Talin-1 OS=Homo sapiens GN=TLN1 PE=1 SV=3
Length = 2541
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 10/164 (6%)
Query: 198 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 257
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2386 DGQWSQGLISAARMVAAATNNLCEAANAAVQGH--ASQEKLISSAKQVAASTAQLLVACK 2443
Query: 258 VKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEM 317
VKA+++S + L A V A+ ++V A+ ++ + + + + ++ +
Sbjct: 2444 VKADQDSEAMKRLQAAGNAVKRASDNLVKAAQKAAAFEEQENETVVVKEKMVGGIAQI-I 2502
Query: 318 EAQVRVLELEAGLEKERLKLSALRRHHLLKKKIVYLALFQEIRD 361
AQ +L E LE+ R KL+ +R+ Y L E+RD
Sbjct: 2503 AAQEEMLRKERELEEARKKLAQIRQQQ-------YKFLPSELRD 2539
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 81 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 140
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2386 DGQWSQGLISAARMVAAATNNLCEAANAAVQGH--ASQEKLISSAKQVAASTAQLLVACK 2443
Query: 141 VKAERNSVHLAALSQASRDVTNATGSVVATAK 172
VKA+++S + L A V A+ ++V A+
Sbjct: 2444 VKADQDSEAMKRLQAAGNAVKRASDNLVKAAQ 2475
>sp|Q9Y4G6|TLN2_HUMAN Talin-2 OS=Homo sapiens GN=TLN2 PE=1 SV=4
Length = 2542
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 91/165 (55%), Gaps = 13/165 (7%)
Query: 198 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 257
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2387 DGQWSQGLISAARMVAAATSSLCEAANASVQGH--ASEEKLISSAKQVAASTAQLLVACK 2444
Query: 258 VKAERNSVHLAALSQASRDVTNATGSVV-ATAKTCIHLVDESADDLDIASLSLHQARRLE 316
VKA+++S + L A V A+ ++V A K D+ DD+ + + + ++
Sbjct: 2445 VKADQDSEAMRRLQAAGNAVKRASDNLVRAAQKAAFGKADD--DDVVVKTKFVGGIAQI- 2501
Query: 317 MEAQVRVLELEAGLEKERLKLSALRRHHLLKKKIVYLALFQEIRD 361
+ AQ +L+ E LE+ R KL+ +R+ Y L E+R+
Sbjct: 2502 IAAQEEMLKKERELEEARKKLAQIRQQQ-------YKFLPTELRE 2539
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 81 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 140
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2387 DGQWSQGLISAARMVAAATSSLCEAANASVQGH--ASEEKLISSAKQVAASTAQLLVACK 2444
Query: 141 VKAERNSVHLAALSQASRDVTNATGSVVATAK 172
VKA+++S + L A V A+ ++V A+
Sbjct: 2445 VKADQDSEAMRRLQAAGNAVKRASDNLVRAAQ 2476
>sp|P54939|TLN1_CHICK Talin-1 OS=Gallus gallus GN=TLN1 PE=1 SV=2
Length = 2541
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 198 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 257
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2385 DGQWSQGLISAARMVAAATNNLCEAANAAVQGH--ASEEKLISSAKQVAASTAQLLVACK 2442
Query: 258 VKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEM 317
VKA+ +S + L A V A+ ++V A+ D D+ + + +
Sbjct: 2443 VKADHDSEAMKRLQAAGNAVKRASDNLVKAAQKAAAFQDH--DETVVVKEKMVGGIAQII 2500
Query: 318 EAQVRVLELEAGLEKERLKLSALRRHHLLKKKIVYLALFQEIRD 361
AQ +L E LE+ R KL+ +R+ Y L E+RD
Sbjct: 2501 AAQEEMLRKERELEEARKKLAMIRQQQ-------YKFLPTELRD 2537
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 55/88 (62%), Gaps = 2/88 (2%)
Query: 81 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 140
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2385 DGQWSQGLISAARMVAAATNNLCEAANAAVQGH--ASEEKLISSAKQVAASTAQLLVACK 2442
Query: 141 VKAERNSVHLAALSQASRDVTNATGSVV 168
VKA+ +S + L A V A+ ++V
Sbjct: 2443 VKADHDSEAMKRLQAAGNAVKRASDNLV 2470
>sp|Q71LX4|TLN2_MOUSE Talin-2 OS=Mus musculus GN=Tln2 PE=1 SV=3
Length = 2375
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 81 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 140
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2298 DGQWSQGLISAARMVAAATSSLCEAANASVQGH--ASEEKLISSAKQVAASTAQLLVACK 2355
Query: 141 VKAERNS 147
VKA+++S
Sbjct: 2356 VKADQDS 2362
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Query: 198 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR 257
+ QW++GLISAA+ VA + L AA+ V G A E+LI ++ VAASTAQL+VA +
Sbjct: 2298 DGQWSQGLISAARMVAAATSSLCEAANASVQGH--ASEEKLISSAKQVAASTAQLLVACK 2355
Query: 258 VKAERNS 264
VKA+++S
Sbjct: 2356 VKADQDS 2362
>sp|Q2W4C3|RS2_MAGSA 30S ribosomal protein S2 OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=rpsB PE=3 SV=1
Length = 266
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 137 VASRVKAERNSVHLAALSQ----------ASRDVTNATGSVVATAKTCIHLAEIIMAHHG 186
+AS + RN +H+ L Q A RDVT G V+ H A ++A
Sbjct: 29 MASYLFGIRNGIHIIDLQQSVPMLHRAMQAVRDVTAGGGRVLFVGTK--HQASDVVAE-- 84
Query: 187 SASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSG 229
SA +++ NH+W G+++ K ++ S + L +Q+ SG
Sbjct: 85 SAKRCGQYFV-NHRWLGGMLTNWKTISNSIRRLRELDEQLASG 126
>sp|Q54BW4|CPAS2_DICDI Circularly permutated Ras protein 2 OS=Dictyostelium discoideum
GN=cpras2 PE=3 SV=1
Length = 3933
Score = 35.4 bits (80), Expect = 0.75, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 245 VAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDESADDLDI 304
+ +T QL + VK E V A + + VT++TG+ VA A+ C+ ++DES I
Sbjct: 2674 ITPTTKQLTIT--VKPEEEIVEPGADTNINVHVTDSTGANVANAEVCLLVIDES-----I 2726
Query: 305 ASLSLH 310
+LS H
Sbjct: 2727 IALSQH 2732
>sp|A5DLF4|DBP4_PICGU ATP-dependent RNA helicase DBP4 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP4 PE=3 SV=2
Length = 754
Score = 35.0 bits (79), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 226 VVSGGEGAKLERLIVASHGVAASTAQLV---VASRVKAERNSVHLAALSQASR------- 275
+V+GG+ K E+ ++ + T + + V E +++ + L +A R
Sbjct: 151 LVTGGKDVKYEKERISRMNILIGTPGRISQHLNEAVGMETSNLQVLVLDEADRCLDMGFR 210
Query: 276 -DVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKER 334
+ N G + T +T + +S + D+A LSL +R+ + + V + LE+
Sbjct: 211 KQIDNILGHLPVTRQTLLFSATQSDNVKDLARLSLVNPKRVGVSSDQEVSSIPESLEQYY 270
Query: 335 LKLS---------ALRRHHLLKKKIVYLALFQEIRDAPKLRAILTVEVSV--VFGRHRQ 382
+K+S + + HL K +V+ + ++++ A + L +S+ ++GRH+Q
Sbjct: 271 IKISLASKMDVLWSFLKSHLKSKILVFFSSSKQVQFAYEAFRRLQPGISLLKLYGRHKQ 329
>sp|Q6BXG0|DBP4_DEBHA ATP-dependent RNA helicase DBP4 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP4 PE=3 SV=2
Length = 766
Score = 33.5 bits (75), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 22/179 (12%)
Query: 226 VVSGGEGAKLERLIVASHGVAASTAQLV---VASRVKAERNSVHLAALSQASR------- 275
+V+GG+ K E+ V+ + T + + V E +++ + L +A R
Sbjct: 151 LVTGGKDVKYEKERVSKMNILVGTPGRISQHLNESVGMETSNLQVLVLDEADRCLDMGFK 210
Query: 276 -DVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKER 334
+ N G + T +T + +S D+A LSL +R+ + + + LE+
Sbjct: 211 KQIDNILGHLPPTRQTLLFSATQSDSVKDLARLSLANPKRVGISSDQELSATPESLEQYY 270
Query: 335 LKLS---------ALRRHHLLKKKIVYLALFQEIRDAPKLRAILTVEVSV--VFGRHRQ 382
+K+ + + HL K +V+ + ++++ A + L +S+ ++GRH+Q
Sbjct: 271 IKIPLDEKLDVLWSFIKSHLKSKILVFFSSSKQVQYAYETFRTLQPGISLLKLYGRHKQ 329
>sp|Q4UND8|RS2_RICFE 30S ribosomal protein S2 OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=rpsB PE=3 SV=1
Length = 295
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 137 VASRVKAERNSVHLAALSQASRDVTNATGSVVATAK---------TCIHLAEIIMAHHGS 187
+AS + ER+ VH+ L Q++ ++ A ++ T K T I ++II +
Sbjct: 30 MASYIYGERDDVHIIDLRQSAALMSVALNTIYETVKKDGKILFVSTKIQASDIIAEY--- 86
Query: 188 ASNTREFYKRNHQWTEGLISAAKAVAMSAKYL 219
A ++Y NH+W G+++ K +A S + L
Sbjct: 87 AEKCGQYY-VNHRWLGGMLTNWKTIAGSIEKL 117
>sp|A1B8E9|RS2_PARDP 30S ribosomal protein S2 OS=Paracoccus denitrificans (strain Pd
1222) GN=rpsB PE=3 SV=1
Length = 261
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Query: 137 VASRVKAERNSVHLAALSQAS----------RDVTNATGSVVATAKTCIHLAEIIMAHHG 186
+A + ERN +H+ L+Q RD G V+ A+ +A
Sbjct: 31 MAEFIYGERNGIHIVDLTQTVPMLDAALQVVRDTVAKGGRVLFVGTK--RQAQKAVAD-- 86
Query: 187 SASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEG-AKLERL 238
+A + +FY NH+W G ++ K V+ S + L + + SG EG K ERL
Sbjct: 87 AAERSAQFYM-NHRWLGGTLTNWKTVSQSIQRLKALDETLGSGAEGLTKKERL 138
>sp|Q6BEX0|YTFR_ECOLI Uncharacterized ABC transporter ATP-binding protein YtfR
OS=Escherichia coli (strain K12) GN=ytfR PE=3 SV=1
Length = 500
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 53 RRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLL 103
RR EME +A +MA +G + + RE R + +++ +A+ +SAK L+
Sbjct: 118 RRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLI 168
>sp|P63299|YTFR_ECO57 Uncharacterized ABC transporter ATP-binding protein YtfR
OS=Escherichia coli O157:H7 GN=ytfR PE=3 SV=1
Length = 500
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 53 RRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLL 103
RR EME +A +MA +G + + RE R + +++ +A+ +SAK L+
Sbjct: 118 RRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAIDLSAKVLI 168
>sp|A8GM32|RS2_RICAH 30S ribosomal protein S2 OS=Rickettsia akari (strain Hartford)
GN=rpsB PE=3 SV=1
Length = 295
Score = 32.7 bits (73), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 137 VASRVKAERNSVHLAALSQASRDVTNATGSVVATAK---------TCIHLAEIIMAHHGS 187
+AS + ER+ VH+ L Q++ ++ A ++ T K T I ++II +
Sbjct: 30 MASYIYGERDDVHIIDLRQSAALMSVALNAIYETVKKDGKVLFVSTKIQASDIIAEY--- 86
Query: 188 ASNTREFYKRNHQWTEGLISAAKAVAMSAKYL 219
A ++Y NH+W G+++ K +A S + L
Sbjct: 87 AEKCGQYY-VNHRWLGGMLTNWKTIAGSIEKL 117
>sp|C4K1A0|RS2_RICPU 30S ribosomal protein S2 OS=Rickettsia peacockii (strain Rustic)
GN=rpsB PE=3 SV=1
Length = 295
Score = 32.0 bits (71), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 137 VASRVKAERNSVHLAALSQASRDVTNATGSVVATAK---------TCIHLAEIIMAHHGS 187
+AS + ER+ VH+ L Q+ ++ A ++ T K T I ++II +
Sbjct: 30 MASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKKDGKILFVSTKIQASDIIAEY--- 86
Query: 188 ASNTREFYKRNHQWTEGLISAAKAVAMSAKYL 219
A ++Y NH+W G+++ K +A S + L
Sbjct: 87 AEKCGQYY-VNHRWLGGMLTNWKTIAGSIEKL 117
>sp|A8F0I9|RS2_RICM5 30S ribosomal protein S2 OS=Rickettsia massiliae (strain Mtu5)
GN=rpsB PE=3 SV=2
Length = 295
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 137 VASRVKAERNSVHLAALSQASRDVTNATGSVVATAK---------TCIHLAEIIMAHHGS 187
+AS + ER+ VH+ L Q+ ++ A ++ T K T I ++II +
Sbjct: 30 MASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKKDGKILFVSTKIQASDIIAEY--- 86
Query: 188 ASNTREFYKRNHQWTEGLISAAKAVAMSAKYL 219
A ++Y NH+W G+++ K +A S + L
Sbjct: 87 AEKCGQYY-VNHRWLGGMLTNWKTIAGSIEKL 117
>sp|Q92JF5|RS2_RICCN 30S ribosomal protein S2 OS=Rickettsia conorii (strain ATCC VR-613
/ Malish 7) GN=rpsB PE=3 SV=1
Length = 295
Score = 32.0 bits (71), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 137 VASRVKAERNSVHLAALSQASRDVTNATGSVVATAK---------TCIHLAEIIMAHHGS 187
+AS + ER+ VH+ L Q+ ++ A ++ T K T I ++II +
Sbjct: 30 MASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKKDGKILFVSTKIQASDIIAEY--- 86
Query: 188 ASNTREFYKRNHQWTEGLISAAKAVAMSAKYL 219
A ++Y NH+W G+++ K +A S + L
Sbjct: 87 AEKCGQYY-VNHRWLGGMLTNWKTIAGSIEKL 117
>sp|C3PMC2|RS2_RICAE 30S ribosomal protein S2 OS=Rickettsia africae (strain ESF-5)
GN=rpsB PE=3 SV=1
Length = 295
Score = 32.0 bits (71), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 13/92 (14%)
Query: 137 VASRVKAERNSVHLAALSQASRDVTNATGSVVATAK---------TCIHLAEIIMAHHGS 187
+AS + ER+ VH+ L Q+ ++ A ++ T K T I ++II +
Sbjct: 30 MASYIYGERDDVHIIDLRQSVALMSVALNAIYETVKKDGKILFVSTKIQASDIIAEY--- 86
Query: 188 ASNTREFYKRNHQWTEGLISAAKAVAMSAKYL 219
A ++Y NH+W G+++ K +A S + L
Sbjct: 87 AEKCGQYY-VNHRWLGGMLTNWKTIAGSIEKL 117
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.126 0.340
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,702,833
Number of Sequences: 539616
Number of extensions: 3977387
Number of successful extensions: 15750
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 15583
Number of HSP's gapped (non-prelim): 144
length of query: 394
length of database: 191,569,459
effective HSP length: 119
effective length of query: 275
effective length of database: 127,355,155
effective search space: 35022667625
effective search space used: 35022667625
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)