Query psy9625
Match_columns 394
No_of_seqs 190 out of 286
Neff 4.7
Searched_HMMs 29240
Date Sat Aug 17 00:32:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9625.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9625hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1r0d_A HIP1-related, huntingti 100.0 4.2E-49 1.4E-53 366.7 20.2 186 115-307 15-206 (206)
2 2jsw_A Talin-1; C-terminal act 100.0 8.1E-45 2.8E-49 334.5 19.9 173 115-294 9-187 (189)
3 1r0d_A HIP1-related, huntingti 100.0 2.6E-40 8.8E-45 307.7 12.7 153 2-175 40-192 (206)
4 2jsw_A Talin-1; C-terminal act 100.0 2.2E-38 7.6E-43 291.8 17.3 153 1-175 33-185 (189)
5 1sj8_A Talin 1; structural pro 99.9 9.5E-21 3.3E-25 185.0 25.2 96 195-292 177-277 (308)
6 1sj8_A Talin 1; structural pro 99.9 6.1E-21 2.1E-25 186.4 17.7 150 18-175 125-277 (308)
7 2qdq_A Talin-1; dimerisation d 99.2 5.3E-12 1.8E-16 92.9 4.6 40 308-347 2-41 (50)
8 3dyj_A Talin-1; helix bundles, 98.8 1.6E-06 5.6E-11 85.8 25.0 226 15-291 53-296 (332)
9 2x0c_A Talin-1; cytoskeleton, 98.7 1.3E-06 4.3E-11 85.9 20.8 157 116-291 136-304 (309)
10 2x0c_A Talin-1; cytoskeleton, 98.5 2.6E-05 8.8E-10 76.7 24.1 233 15-261 41-306 (309)
11 1u89_A Talin 1, talin; 4-helix 98.4 3E-06 1E-10 74.8 13.3 117 148-294 12-130 (139)
12 1h6g_A Alpha-1 catenin; adhesi 98.3 0.00025 8.7E-09 67.5 23.8 124 26-176 5-131 (256)
13 3dyj_A Talin-1; helix bundles, 98.2 0.0017 5.9E-08 64.3 27.7 233 18-290 81-328 (332)
14 1tr2_A Vinculin isoform 1; act 98.1 0.00024 8.3E-09 79.6 23.3 272 14-292 655-1005(1066)
15 1tr2_A Vinculin isoform 1; act 98.0 0.0021 7.1E-08 72.1 26.5 260 18-290 539-837 (1066)
16 3fyq_A CG6831-PA (talin); 5-he 97.4 0.014 5E-07 54.0 18.9 119 147-292 43-166 (199)
17 2l7n_A Talin-1; integrin, bund 97.1 0.022 7.7E-07 51.5 16.0 77 208-286 81-162 (168)
18 2l10_A Talin-1; helical bundle 97.1 0.036 1.2E-06 49.7 17.1 138 124-288 13-154 (158)
19 1u89_A Talin 1, talin; 4-helix 97.0 0.011 3.7E-07 52.1 13.1 115 44-175 12-128 (139)
20 2l7a_A Talin-1; vinculin, bund 97.0 0.0032 1.1E-07 54.9 9.1 76 217-294 23-100 (131)
21 1zw2_B Talin, metavinculin; co 96.6 0.0011 3.8E-08 42.7 2.6 21 20-40 1-21 (26)
22 3vf0_A Vinculin, metavinculin; 96.5 0.023 8E-07 55.1 11.9 138 15-175 110-262 (283)
23 1h6g_A Alpha-1 catenin; adhesi 96.4 0.63 2.2E-05 44.0 21.5 180 79-288 65-253 (256)
24 4f7g_B Talin-1; alpha-helix bu 96.4 0.39 1.3E-05 45.0 19.6 122 146-294 64-189 (216)
25 2l7a_A Talin-1; vinculin, bund 96.2 0.032 1.1E-06 48.6 10.2 82 203-284 40-124 (131)
26 3fyq_A CG6831-PA (talin); 5-he 95.9 0.12 4.1E-06 47.9 13.0 136 201-346 45-196 (199)
27 1qkr_A Vinculin, tail domain; 95.7 0.061 2.1E-06 49.5 10.1 138 16-175 16-167 (188)
28 1sj7_A Talin 1; structural pro 95.2 0.025 8.6E-07 51.5 5.6 48 18-65 125-172 (174)
29 1u6h_B Talin; protein-protein 94.8 0.014 4.8E-07 39.1 2.2 29 198-226 1-29 (31)
30 2l10_A Talin-1; helical bundle 93.4 4.1 0.00014 36.3 17.1 138 21-172 11-155 (158)
31 3rf3_A Vinculin, metavinculin; 93.3 5.7 0.00019 37.8 21.4 167 92-294 44-215 (258)
32 3vf0_A Vinculin, metavinculin; 93.3 0.67 2.3E-05 45.0 11.4 70 192-261 151-221 (283)
33 4f7g_B Talin-1; alpha-helix bu 93.3 2 6.9E-05 40.2 14.4 137 133-292 14-152 (216)
34 1qkr_A Vinculin, tail domain; 92.2 0.96 3.3E-05 41.5 10.4 72 191-262 55-127 (188)
35 2l7n_A Talin-1; integrin, bund 90.4 1.3 4.5E-05 39.9 9.3 79 91-169 81-162 (168)
36 3rf3_A Vinculin, metavinculin; 89.0 16 0.00054 34.7 16.6 198 18-258 10-211 (258)
37 1u6h_B Talin; protein-protein 88.7 0.11 3.9E-06 34.7 0.7 22 235-256 5-26 (31)
38 1zw2_B Talin, metavinculin; co 86.5 0.29 1E-05 31.5 1.6 22 153-175 2-23 (26)
39 1sj7_A Talin 1; structural pro 80.5 21 0.00072 32.3 11.8 57 193-253 115-171 (174)
40 2b0h_A Talin-1; vinculin, heli 73.9 44 0.0015 29.0 12.6 82 86-175 19-102 (137)
41 2b0h_A Talin-1; vinculin, heli 71.1 51 0.0018 28.6 13.3 87 203-291 44-135 (137)
42 2kvp_A Talin-1; VBS, vinculin, 70.0 60 0.0021 28.9 13.8 82 86-175 47-130 (165)
43 2kvp_A Talin-1; VBS, vinculin, 67.6 68 0.0023 28.6 15.4 85 204-290 73-162 (165)
44 3gm3_A Protein tyrosine kinase 64.2 78 0.0027 28.1 14.5 94 86-226 48-141 (153)
45 4igg_A Catenin alpha-1; asymme 63.4 1.8E+02 0.0062 32.0 30.1 101 191-291 645-758 (832)
46 1z23_A CRK-associated substrat 58.4 1E+02 0.0035 27.5 15.4 136 115-292 10-154 (163)
47 1dow_A Alpha-catenin; four-hel 53.6 1.3E+02 0.0046 27.4 21.0 164 93-293 7-174 (205)
48 3s90_C Talin-1, metavinculin; 51.8 9.8 0.00033 26.7 2.6 21 236-256 17-37 (40)
49 1dow_A Alpha-catenin; four-hel 51.6 1.4E+02 0.0049 27.2 16.1 55 234-288 147-203 (205)
50 2jx0_A ARF GTPase-activating p 43.5 1.6E+02 0.0056 25.5 10.7 52 234-286 68-127 (135)
51 3axj_A GM27569P, translin; tra 43.3 1.5E+02 0.0052 27.7 10.3 84 115-214 35-119 (249)
52 3mq9_A Bone marrow stromal ant 41.7 2.4E+02 0.0082 27.6 12.0 31 310-342 441-471 (471)
53 3gm3_A Protein tyrosine kinase 39.4 2E+02 0.0069 25.4 12.1 115 159-292 23-142 (153)
54 1syq_B Talin 1; cytoskeleton, 33.6 43 0.0015 20.9 3.1 21 20-40 2-22 (26)
55 3twe_A Alpha4H; unknown functi 33.0 45 0.0015 21.0 3.1 19 325-343 5-23 (27)
56 1t01_B Talin 1; five helix bun 29.9 38 0.0013 21.2 2.4 22 19-40 3-24 (26)
57 2l81_A Enhancer of filamentati 29.7 3.1E+02 0.011 24.7 14.0 143 115-291 20-165 (176)
58 1zvz_B Talin 1, metavinculin; 29.7 27 0.00092 22.1 1.8 19 238-256 3-21 (26)
59 2jx0_A ARF GTPase-activating p 28.7 2.9E+02 0.0099 24.0 12.1 32 9-40 8-39 (135)
60 2lw9_A Unconventionnal myosin- 27.8 48 0.0016 24.2 3.0 16 321-336 6-21 (51)
61 2ke4_A CDC42-interacting prote 27.7 1E+02 0.0036 25.1 5.5 41 300-343 4-44 (98)
62 3qb5_K Translin-associated pro 24.3 4.6E+02 0.016 24.9 10.6 84 115-215 50-134 (290)
63 3hnw_A Uncharacterized protein 23.8 3.4E+02 0.012 23.1 10.2 103 233-347 25-129 (138)
64 1j1j_A Translin; testis/brain 22.3 4.6E+02 0.016 24.1 11.3 85 115-214 30-116 (240)
65 1ykh_B RNA polymerase II holoe 20.6 1.8E+02 0.0063 24.6 6.0 61 272-343 54-114 (132)
No 1
>1r0d_A HIP1-related, huntingtin interacting protein 12, HIP 12; endocytosis, actin-binding, structural genomics, PSI, protein structure initiative; 1.90A {Homo sapiens} SCOP: a.216.1.1
Probab=100.00 E-value=4.2e-49 Score=366.67 Aligned_cols=186 Identities=37% Similarity=0.534 Sum_probs=168.8
Q ss_pred chhHhHHHH-HhHHHHHHHHHHHHHh-ccc----cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCC
Q psy9625 115 GAKLERLIV-ASHGVAASTAQLVVAS-RVK----AERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSA 188 (394)
Q Consensus 115 ~~~~E~li~-AAk~VaAATaqLvaas-rvK----a~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~ 188 (394)
++.+|++|. ++++|++++.+|..+. +.+ ...+.+++.||+ |+++|++|+..||++++.+| +|||.+|+|..
T Consensus 15 ~~~~e~El~~aa~aIe~Aa~kL~~l~~~~~~~~~~~~l~v~e~IL~-aa~~i~~Ai~~LV~aA~~aQ--~EiV~~Gr~~~ 91 (206)
T 1r0d_A 15 GAVVDKEMAATSAAIEDAVRRIEDMMNQARHASSGVKLEVNERILN-SCTDLMKAIRLLVTTSTSLQ--KEIVESGRGAA 91 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH--HHHHHHHCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcCccchHHHHH-HHHHHHHHHHHHHHHHHHHH--HHHHHhcCCCC
Confidence 788999888 8899999999999986 333 235679999999 99999999999999999999 99999999987
Q ss_pred CCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhhccCCCchhHH
Q psy9625 189 SNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLA 268 (394)
Q Consensus 189 ~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~~~S~~~~ 268 (394)
+ ..+||++|+|||||||||||+|+.+|+.|||+||++|+|+ +++|+|||++++|++||||||+|||||++++|++++
T Consensus 92 s-~~~fy~kn~~WtEGLISAAkaVa~at~~LveaAd~vv~g~--~~~E~LIvaa~eVAAsTAQLvaAsrVKa~~~S~~~~ 168 (206)
T 1r0d_A 92 T-QQEFYAKNSRWTEGLISASKAVGWGATQLVEAADKVVLHT--GKYEELIVCSHEIAASTAQLVAASKVKANKHSPHLS 168 (206)
T ss_dssp C-HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS--CCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTTHH
T ss_pred C-CccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHH
Confidence 6 6899999999999999999999999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccc
Q psy9625 269 ALSQASRDVTNATGSVVATAKTCIHLVDESADDLDIASL 307 (394)
Q Consensus 269 ~L~~Ask~V~~At~~LV~avk~~~~~~~~~~~~~d~s~l 307 (394)
+|+.||+.|++||++||++||.+....++ .+.+||++|
T Consensus 169 ~L~~Ask~V~~A~~~lV~avk~~~~~~e~-~~~~D~s~l 206 (206)
T 1r0d_A 169 RLQECSRTVNERAANVVASTKSGQEQIED-RDTMDFSGL 206 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccccCcccC
Confidence 99999999999999999999999766554 468999975
No 2
>2jsw_A Talin-1; C-terminal actin binding site, ABS3, thatch domain, cytoskeleton, phosphorylation, structural protein, actin- binding protein; NMR {Mus musculus}
Probab=100.00 E-value=8.1e-45 Score=334.54 Aligned_cols=173 Identities=31% Similarity=0.393 Sum_probs=161.4
Q ss_pred chhHhHHHH-HhHHHHHHHHHHHHHh-ccc----cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCC
Q psy9625 115 GAKLERLIV-ASHGVAASTAQLVVAS-RVK----AERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSA 188 (394)
Q Consensus 115 ~~~~E~li~-AAk~VaAATaqLvaas-rvK----a~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~ 188 (394)
++.+|++|. +++.|++++.+|..+. +.| .....+++.||+ |++.|+.|+..||++++.+| +|||.+|+|+.
T Consensus 9 ~~~~E~EL~~aa~aIe~A~~~l~~l~~~~~~~~~~~~l~v~e~IL~-aa~~i~~Ai~~Lv~aA~~aQ--~Eiv~~Gr~~~ 85 (189)
T 2jsw_A 9 TVIAENELLGAAAAIEAAAKKLEQLKPRAKPKEADESLNFEEQILE-AAKSIAAATSALVKAASAAQ--RELVAQGKVGA 85 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCSCCSSSCCSSCCHHHHHHH-HHHHHHHHHHHHHHHHHHHH--HHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCcCCCccHHHHH-HHHHHHHHHHHHHHHHHHHH--HHHHHhcCCCC
Confidence 778899888 8899999999999885 222 345679999999 99999999999999999999 89999999876
Q ss_pred CCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhhccCCCchhHH
Q psy9625 189 SNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLA 268 (394)
Q Consensus 189 ~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~~~S~~~~ 268 (394)
...||++|++||||||||||+|+.+|++||++||++|+|+ +++|+||+++++|++||+|||+|||||++++|++|+
T Consensus 86 --~~~fy~~n~~WtEGLiSAAKaVa~at~~LveaAd~vv~g~--~~~E~LIvaa~eVAAsTaQLvaAsrVKa~~~S~~q~ 161 (189)
T 2jsw_A 86 --IPANALDDGQWSQGLISAARMVAAATNNLCEAANAAVQGH--ASQEKLISSAKQVAASTAQLLVACKVKADQDSEAMK 161 (189)
T ss_dssp --SGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC--CCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTSHHHH
T ss_pred --CccccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHH
Confidence 4579999999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 269 ALSQASRDVTNATGSVVATAKTCIHL 294 (394)
Q Consensus 269 ~L~~Ask~V~~At~~LV~avk~~~~~ 294 (394)
+|+.||++|++||++||+++|++.+.
T Consensus 162 ~L~~Ask~V~~a~~~LV~~v~~a~~~ 187 (189)
T 2jsw_A 162 RLQAAGNAVKRASDNLVKAAQKAAAF 187 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999998654
No 3
>1r0d_A HIP1-related, huntingtin interacting protein 12, HIP 12; endocytosis, actin-binding, structural genomics, PSI, protein structure initiative; 1.90A {Homo sapiens} SCOP: a.216.1.1
Probab=100.00 E-value=2.6e-40 Score=307.71 Aligned_cols=153 Identities=54% Similarity=0.756 Sum_probs=148.2
Q ss_pred CccccCcCCCcccccchHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhc
Q psy9625 2 LTQSRRADTGVKLEVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRN 81 (394)
Q Consensus 2 ~~~~~~~~~~~~l~v~e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~ 81 (394)
+.++|.+++|++|+|||+||++|+.||.||+.||++|+. +|+|||.+||++.+ ..+||++|
T Consensus 40 ~~~~~~~~~~~~l~v~e~IL~aa~~i~~Ai~~LV~aA~~------------------aQ~EiV~~Gr~~~s-~~~fy~kn 100 (206)
T 1r0d_A 40 MNQARHASSGVKLEVNERILNSCTDLMKAIRLLVTTSTS------------------LQKEIVESGRGAAT-QQEFYAKN 100 (206)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHCTTSC-HHHHHHHT
T ss_pred hhccccccCCcCccchHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHhcCCCCC-CccccccC
Confidence 456677789999999999999999999999999999999 99999999999987 78999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHH
Q psy9625 82 HQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVT 161 (394)
Q Consensus 82 ~swteGLISAakaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaqLvaasrvKa~~~s~~~~~L~~Aa~aVt 161 (394)
++|+||||||+|+|+.+++.||++||++++| ..++|+||+++++|+++|+|||++||||++++|.++.+|+.|+++|+
T Consensus 101 ~~WtEGLISAAkaVa~at~~LveaAd~vv~g--~~~~E~LIvaa~eVAAsTAQLvaAsrVKa~~~S~~~~~L~~Ask~V~ 178 (206)
T 1r0d_A 101 SRWTEGLISASKAVGWGATQLVEAADKVVLH--TGKYEELIVCSHEIAASTAQLVAASKVKANKHSPHLSRLQECSRTVN 178 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTTHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh
Q psy9625 162 NATGSVVATAKTCI 175 (394)
Q Consensus 162 ~A~~~LV~aA~~aq 175 (394)
+||+.||++++.++
T Consensus 179 ~A~~~lV~avk~~~ 192 (206)
T 1r0d_A 179 ERAANVVASTKSGQ 192 (206)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999997
No 4
>2jsw_A Talin-1; C-terminal actin binding site, ABS3, thatch domain, cytoskeleton, phosphorylation, structural protein, actin- binding protein; NMR {Mus musculus}
Probab=100.00 E-value=2.2e-38 Score=291.77 Aligned_cols=153 Identities=33% Similarity=0.444 Sum_probs=147.5
Q ss_pred CCccccCcCCCcccccchHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhh
Q psy9625 1 MLTQSRRADTGVKLEVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKR 80 (394)
Q Consensus 1 ~~~~~~~~~~~~~l~v~e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~ 80 (394)
|+.++|.+++|.+|+|||.||++|+.||.||+.||++|+. +|+|||..||++.+ ..||++
T Consensus 33 l~~~~~~~~~~~~l~v~e~IL~aa~~i~~Ai~~Lv~aA~~------------------aQ~Eiv~~Gr~~~~--~~fy~~ 92 (189)
T 2jsw_A 33 LKPRAKPKEADESLNFEEQILEAAKSIAAATSALVKAASA------------------AQRELVAQGKVGAI--PANALD 92 (189)
T ss_dssp CCCSCCSSSCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHTCSCCS--GGGHHH
T ss_pred HhhccccccCCcCCCccHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHhcCCCCC--cccccc
Confidence 5678888899999999999999999999999999999999 99999999999875 479999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHH
Q psy9625 81 NHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDV 160 (394)
Q Consensus 81 ~~swteGLISAakaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaqLvaasrvKa~~~s~~~~~L~~Aa~aV 160 (394)
|++|+|||||++|.|+.+++.||++||++++| ..++|+||+++++|+++|+|||++||||++++|.++.+|+.|+++|
T Consensus 93 n~~WtEGLiSAAKaVa~at~~LveaAd~vv~g--~~~~E~LIvaa~eVAAsTaQLvaAsrVKa~~~S~~q~~L~~Ask~V 170 (189)
T 2jsw_A 93 DGQWSQGLISAARMVAAATNNLCEAANAAVQG--HASQEKLISSAKQVAASTAQLLVACKVKADQDSEAMKRLQAAGNAV 170 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHHHTTTSCTTSHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q psy9625 161 TNATGSVVATAKTCI 175 (394)
Q Consensus 161 t~A~~~LV~aA~~aq 175 (394)
++||+.||++++.+.
T Consensus 171 ~~a~~~LV~~v~~a~ 185 (189)
T 2jsw_A 171 KRASDNLVKAAQKAA 185 (189)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999876
No 5
>1sj8_A Talin 1; structural protein; 2.60A {Mus musculus} SCOP: a.215.1.1 a.216.1.1
Probab=99.88 E-value=9.5e-21 Score=184.99 Aligned_cols=96 Identities=27% Similarity=0.288 Sum_probs=90.8
Q ss_pred hccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchh---HHHHHhhhhHHHHHHHHHHHhhccCCC--chhHHH
Q psy9625 195 YKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLE---RLIVASHGVAASTAQLVVASRVKAERN--SVHLAA 269 (394)
Q Consensus 195 y~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E---~LIvaa~eVAAsTAQLv~AsrVKa~~~--S~~~~~ 269 (394)
|++|++|.||||++||+||.+|+.||..|+++.+|. .++| +||++++++|.||+|||++||||++.. +.+|++
T Consensus 177 ~~~d~~~~e~Li~aAKAVA~ATa~LV~~Ak~Va~~~--~d~e~Q~~lI~AA~~~A~sTsQLVA~sKV~Apti~s~~cQeq 254 (308)
T 1sj8_A 177 SDTDPHFQDVLMQLANAVASAAAALVLKAKSVAQRT--EDSGLQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQ 254 (308)
T ss_dssp CCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC--TTSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHH
Confidence 788999999999999999999999999999999998 7888 999999999999999999999999877 566899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 270 LSQASRDVTNATGSVVATAKTCI 292 (394)
Q Consensus 270 L~~Ask~V~~At~~LV~avk~~~ 292 (394)
|+.|+|.|+++|++||++++.+.
T Consensus 255 L~~A~k~V~~av~~Lv~~~~~a~ 277 (308)
T 1sj8_A 255 LVEAGRLVAKAVEGCVSASQAAT 277 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998663
No 6
>1sj8_A Talin 1; structural protein; 2.60A {Mus musculus} SCOP: a.215.1.1 a.216.1.1
Probab=99.86 E-value=6.1e-21 Score=186.36 Aligned_cols=150 Identities=25% Similarity=0.246 Sum_probs=136.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHHHHHHHHHHHHH
Q psy9625 18 EKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAM 97 (394)
Q Consensus 18 e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swteGLISAakaVa~ 97 (394)
+.||++++.|+.||+.|++++.+..++||++|.+|+.+++.+-..++.+-+ + |+.+++|.||||+++|+|+.
T Consensus 125 ~~Ll~AAk~l~~Ais~Llkaa~~~~~e~rq~ll~AA~~Vg~as~~~l~~i~-------e-~~~d~~~~e~Li~aAKAVA~ 196 (308)
T 1sj8_A 125 RPLLQAAKGLAGAVSELLRSAQPASAEPRQNLLQAAGNVGQASGELLQQIG-------E-SDTDPHFQDVLMQLANAVAS 196 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTCCSCTHHHHHHHHHHHHHHHHHHHHTT-------C-CCSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccccchHHHHHHHHHhHhHHHHHHHHhcC-------c-cccchHHHHHHHHHHHHHHH
Confidence 479999999999999999999999999999999999999999888887542 1 56788999999999999999
Q ss_pred HHHHHHHHHHHhhcCCC-chhHhHHHHHhHHHHHHHHHHHHHhccccccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9625 98 SAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASRVKAERN--SVHLAALSQASRDVTNATGSVVATAKTC 174 (394)
Q Consensus 98 a~~~Lve~Ad~lv~g~d-~~~~E~li~AAk~VaAATaqLvaasrvKa~~~--s~~~~~L~~Aa~aVt~A~~~LV~aA~~a 174 (394)
+|+.||..|++++.|.+ ....+++|+++++++.+|.|||+++|||++.+ +.+|.+|+.|+++|+.||+.||.+++.+
T Consensus 197 ATa~LV~~Ak~Va~~~~d~e~Q~~lI~AA~~~A~sTsQLVA~sKV~Apti~s~~cQeqL~~A~k~V~~av~~Lv~~~~~a 276 (308)
T 1sj8_A 197 AAAALVLKAKSVAQRTEDSGLQTQVIAAATQCALSTSQLVACTKVVAPTISSPVCQEQLVEAGRLVAKAVEGCVSASQAA 276 (308)
T ss_dssp HHHHHHHHHHHHHTSCTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999954 34445999999999999999999999999877 7899999999999999999999998866
Q ss_pred h
Q psy9625 175 I 175 (394)
Q Consensus 175 q 175 (394)
.
T Consensus 277 ~ 277 (308)
T 1sj8_A 277 T 277 (308)
T ss_dssp C
T ss_pred h
Confidence 5
No 7
>2qdq_A Talin-1; dimerisation domain, C-terminal actin binding site, ABS3, latch domain, structural protein; 2.20A {Mus musculus}
Probab=99.24 E-value=5.3e-12 Score=92.91 Aligned_cols=40 Identities=25% Similarity=0.267 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy9625 308 SLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRHHLLK 347 (394)
Q Consensus 308 s~~~~k~~emE~Qv~ILklE~eLe~aR~kL~~iRk~~Y~~ 347 (394)
+++++|++||++|++||++|+|||.||++|+.||+.+|.+
T Consensus 2 ~~v~~~aqEi~Aqe~iLr~ErELEeAr~~La~iR~~kY~~ 41 (50)
T 2qdq_A 2 AMVGGIAQIIAAQEEMLRKERELEEARKKLAQIRQQQYKF 41 (50)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3688999999999999999999999999999999999998
No 8
>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B
Probab=98.81 E-value=1.6e-06 Score=85.84 Aligned_cols=226 Identities=17% Similarity=0.155 Sum_probs=137.3
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHHHHHHHHHH
Q psy9625 15 EVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKA 94 (394)
Q Consensus 15 ~v~e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swteGLISAaka 94 (394)
...|.||..++.|...+..||..+.. .|+.|-...+... +.-.-|..+.|.
T Consensus 53 ~~~e~Ilk~ak~Lve~~~~Lv~~a~~------------------tqe~La~aa~~~a-----------~~i~~La~~vK~ 103 (332)
T 3dyj_A 53 DHREGILKTAKVLVEDTKVLVQNAAG------------------SQEKLAQAAQSSV-----------ATITRLADVVKL 103 (332)
T ss_dssp GTHHHHHHHHHHHHHHHHHHHHHSSS------------------CHHHHHHHHHHHH-----------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhc------------------cHHHHHHHHHHHH-----------HHHHHHHHHHHH
Confidence 46789999999999999999999999 6665544322111 111222222232
Q ss_pred HHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 95 VAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAE--RNSVHLAALSQASRDVTNATGSVVATAK 172 (394)
Q Consensus 95 Va~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaqLvaasrvKa~--~~s~~~~~L~~Aa~aVt~A~~~LV~aA~ 172 (394)
.+.++ ...|.+..-.+|.+++.|+.+-.+|+.+.|.-.+ .+...+..|-.+++.+..++..|++.++
T Consensus 104 gAAsl-----------~~~d~~tQv~lLna~kdVa~al~~Li~atK~A~G~~~~dpa~~~Lk~aAk~mv~nV~sLlktVk 172 (332)
T 3dyj_A 104 GAASL-----------GAEDPETQVVLINAVKDVAKALGDLISATKAAAGKVGDDPAVWQLKNSAKVMVTNVTSLLKTVK 172 (332)
T ss_dssp HHHHT-----------CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHh-----------cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 1112333444555666666666666666532211 2245567777777777777777777764
Q ss_pred HhhH------------HHHHHHHhc-CCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHH
Q psy9625 173 TCIH------------LAEIIMAHH-GSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLI 239 (394)
Q Consensus 173 ~aq~------------~~EiV~qg~-gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LI 239 (394)
..-+ +.+|-.+-+ ...+ .--.+..--|-||.++|-|..++..+|-+.+. +.+|+||
T Consensus 173 ~vede~~rG~RaLEaai~~I~~el~~~~s~----~~p~~~~tpE~li~~ak~vt~atakaVaA~ns-------~~qeDii 241 (332)
T 3dyj_A 173 AVEDEATKGTRALEATTEHIRQELAVFCSP----EPPAKTSTPEDFIRMTKGITMATAKAVAAGNS-------CRQEDVI 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSS----SCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHH-------CCHHHHH
T ss_pred hhhccccchhHHHHHHHHHHHHHHHccCCC----CCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCC-------CCHHHHH
Confidence 4332 111111000 0111 00112345788888888888888888887653 4788888
Q ss_pred HHhhhhHHHHHHHHHHHhhccC-C--CchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 240 VASHGVAASTAQLVVASRVKAE-R--NSVHLAALSQASRDVTNATGSVVATAKTC 291 (394)
Q Consensus 240 vaa~eVAAsTAQLv~AsrVKa~-~--~S~~~~~L~~Ask~V~~At~~LV~avk~~ 291 (394)
.+++-.-.+..=|+.+||.-+. + .-+...+...+++.+.....+|+.+++..
T Consensus 242 ~aan~~r~aV~dll~~~k~aa~~~~~~~e~r~~~~~~~k~~a~~~~~LL~~v~~~ 296 (332)
T 3dyj_A 242 ATANLSRRAIADMLRACKEAAFHPEVAPDVRLRALHYGRECANGYLELLDHVLLT 296 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888888888875442 2 33566778888888888888888877655
No 9
>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B
Probab=98.71 E-value=1.3e-06 Score=85.95 Aligned_cols=157 Identities=17% Similarity=0.229 Sum_probs=117.4
Q ss_pred hhHhHHHHHhHHHHHHHHHHHHHhccc--cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccc
Q psy9625 116 AKLERLIVASHGVAASTAQLVVASRVK--AERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTRE 193 (394)
Q Consensus 116 ~~~E~li~AAk~VaAATaqLvaasrvK--a~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~ 193 (394)
....++|.+|+.|...|..|..+||.- ...+......|.++++.|..++.+||.+.+..-+ .
T Consensus 136 ~~q~~vL~~A~~va~~t~~L~~~cr~as~~~~n~~~k~ql~~~ak~va~st~~lV~~iK~ld~----------------~ 199 (309)
T 2x0c_A 136 CTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVKTIKALDG----------------D 199 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT----------------S
T ss_pred ccHHHHHHHHHHHHHhhHHHHHHHHHHhcCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------c
Confidence 567778899999999999999999633 2235567788888999999999999998765541 1
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHHHHHHHHh-----hcCCC---CCchhHHHHHhhhhHHHHHHHHHHHhhcc-CCCc
Q psy9625 194 FYKRNHQWTEGLISAAKAVAMSAKYLLTAADQV-----VSGGE---GAKLERLIVASHGVAASTAQLVVASRVKA-ERNS 264 (394)
Q Consensus 194 fy~k~~~WteGLISAAk~Va~at~~LveaA~~~-----v~g~~---~~~~E~LIvaa~eVAAsTAQLv~AsrVKa-~~~S 264 (394)
|..+++ +-+-+|++-.-.+++.|+..|..- ..|.. ....+.++.+++.|..++.+|+.+.|.=+ +|.+
T Consensus 200 -~~~~~r--~~~~~aa~~L~~Av~~Lv~~A~spefa~~~~~is~~~~~aq~~il~a~r~v~~~s~~ll~taK~la~~P~d 276 (309)
T 2x0c_A 200 -FTEENR--AQCRAATAPLLEAVDNLSAFASNPEFSSVPAQISPEGRAAMEPIVISAKTMLESAGGLIQTARALAVNPRD 276 (309)
T ss_dssp -CCHHHH--HHHHHHHHHHHHHHHHHHHHHTSSSSSCBCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred -CCchhH--HHHHHHHHHHHHHHHHHHHHhcChhhhhcccccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 222222 567777777777777777776420 00110 02357899999999999999999997643 6666
Q ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 265 VH-LAALSQASRDVTNATGSVVATAKTC 291 (394)
Q Consensus 265 ~~-~~~L~~Ask~V~~At~~LV~avk~~ 291 (394)
+. ..+|..++|.|.+.++.||...+..
T Consensus 277 p~~~~~La~~ar~VSdsI~~Li~ai~~~ 304 (309)
T 2x0c_A 277 PPRWSVLAGHSRTVSDSIKKLITSMRDK 304 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 54 6999999999999999999988654
No 10
>2x0c_A Talin-1; cytoskeleton, cell membrane, actin, synemin, integrin, vincu cell adhesion, cell projection; 2.00A {Mus musculus} PDB: 1zw3_B
Probab=98.53 E-value=2.6e-05 Score=76.67 Aligned_cols=233 Identities=19% Similarity=0.187 Sum_probs=158.3
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHcc------CCC-----------Ccchhh
Q psy9625 15 EVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHH------GSA-----------SNTREF 77 (394)
Q Consensus 15 ~v~e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr------~s~-----------~~~~~F 77 (394)
+.-+.|.+.++.|..++..|...+... +.. -+-.+.+...++-..|++..+ +.. -+..+|
T Consensus 41 ~c~~~l~~~sK~Lg~~m~~l~~~a~~~-~~~--~~g~a~~~~a~al~~Lteaa~~aaylvgVs~p~s~~g~~glvD~~~~ 117 (309)
T 2x0c_A 41 GCLDSVMENSKVLGEAMTGISQNAKNG-NLP--EFGDAIATASKALCGFTEAAAQAAYLVGVSDPNSQAGQQGLVEPTQF 117 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-CHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCBCCBCCSSCSHHH
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcC-Chh--hhhHHHHHHHHHHHHHHHHHHHHhhhhhccccccccCccccchHHHH
Confidence 345678888888888888888866651 211 122222333344444555544 111 011222
Q ss_pred h----------hhchhh--H-HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhH-hHHHHHhHHHHHHHHHHHHHhc-cc
Q psy9625 78 Y----------KRNHQW--T-EGLISAAKAVAMSAKYLLTAADQVVSGGEGAKL-ERLIVASHGVAASTAQLVVASR-VK 142 (394)
Q Consensus 78 y----------~~~~sw--t-eGLISAakaVa~a~~~Lve~Ad~lv~g~d~~~~-E~li~AAk~VaAATaqLvaasr-vK 142 (394)
- .....| + .-|++++..|...+..|++.+.....+..+... .++..+++.|+.+|++||...| +.
T Consensus 118 ~ra~~~i~~ac~~~~~~~~~q~~vL~~A~~va~~t~~L~~~cr~as~~~~n~~~k~ql~~~ak~va~st~~lV~~iK~ld 197 (309)
T 2x0c_A 118 ARANQAIQMACQSLGEPGCTQAQVLSAATIVAKHTSALCNSCRLASARTANPTAKRQFVQSAKEVANSTANLVKTIKALD 197 (309)
T ss_dssp HHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccCCccccHHHHHHHHHHHHHhhHHHHHHHHHHhcCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 333334 3 678999999999999999998877654323334 4455599999999999998763 34
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHH
Q psy9625 143 AERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTA 222 (394)
Q Consensus 143 a~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~Lvea 222 (394)
..+...+..++..|++.+..|+.+||..+.. - |. .+.+ ......+..--+-+|.++|.|..+...|+.+
T Consensus 198 ~~~~~~~r~~~~~aa~~L~~Av~~Lv~~A~s-p---ef-----a~~~--~~is~~~~~aq~~il~a~r~v~~~s~~ll~t 266 (309)
T 2x0c_A 198 GDFTEENRAQCRAATAPLLEAVDNLSAFASN-P---EF-----SSVP--AQISPEGRAAMEPIVISAKTMLESAGGLIQT 266 (309)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHHTS-S---SS-----SCBC--CBCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCchhHHHHHHHHHHHHHHHHHHHHHhcC-h---hh-----hhcc--cccChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555677788888999999999999998762 1 00 1111 1111112223478999999999999999999
Q ss_pred HHHhhcCCCCC-chhHHHHHhhhhHHHHHHHHHHHhhccC
Q psy9625 223 ADQVVSGGEGA-KLERLIVASHGVAASTAQLVVASRVKAE 261 (394)
Q Consensus 223 A~~~v~g~~~~-~~E~LIvaa~eVAAsTAQLv~AsrVKa~ 261 (394)
|..+..+-++. ...+|..+++.|..+.-+|+.+||-++.
T Consensus 267 aK~la~~P~dp~~~~~La~~ar~VSdsI~~Li~ai~~~aP 306 (309)
T 2x0c_A 267 ARALAVNPRDPPRWSVLAGHSRTVSDSIKKLITSMRDKAP 306 (309)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99998876322 3678999999999999999999998864
No 11
>1u89_A Talin 1, talin; 4-helix bundle, LEFT-handed, structural protein; NMR {Mus musculus} SCOP: a.216.1.1
Probab=98.44 E-value=3e-06 Score=74.75 Aligned_cols=117 Identities=21% Similarity=0.235 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhh
Q psy9625 148 VHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVV 227 (394)
Q Consensus 148 ~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v 227 (394)
..-..|..|+..|++|...|+..++..- ++.. +..-| . ..+..+..+.+.++
T Consensus 12 ~~~~~l~~AA~~Vt~aL~dLL~hik~~~----------~~~~-~~~~~------~-----------~~~d~Il~~t~~l~ 63 (139)
T 1u89_A 12 QLLRGVGAAATAVTQALNELLQHVKAHA----------TGAG-PAGRY------D-----------QATDTILTVTENIF 63 (139)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHTTSS----------CCSS-SCSCC------H-----------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccc----------cccc-cchhh------h-----------hHHHHHHHHHHHHH
Confidence 4455677899999999999999887442 1111 11122 2 23355666677777
Q ss_pred cCCCCCchhHHHHHhhhhHHHHHHHHHHHhhccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 228 SGGEGAKLERLIVASHGVAASTAQLVVASRVKAE--RNSVHLAALSQASRDVTNATGSVVATAKTCIHL 294 (394)
Q Consensus 228 ~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~--~~S~~~~~L~~Ask~V~~At~~LV~avk~~~~~ 294 (394)
... +.++++|..++.++-+|++||-+.|..++ .+++.+++|-.|.|.|.+||..||.++|.|...
T Consensus 64 ~s~--gd~~eMvrqak~Laqat~~LV~~iK~eAe~~~D~~~q~rLL~AAk~lAdATa~mVeAAk~~a~n 130 (139)
T 1u89_A 64 SSM--GDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAH 130 (139)
T ss_dssp HTT--TTSHHHHHHHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred Hhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 777 89999999999999999999999988786 456889999999999999999999999999754
No 12
>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A
Probab=98.29 E-value=0.00025 Score=67.52 Aligned_cols=124 Identities=15% Similarity=0.099 Sum_probs=81.6
Q ss_pred HHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHHHHH
Q psy9625 26 TLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTA 105 (394)
Q Consensus 26 ~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swteGLISAakaVa~a~~~Lve~ 105 (394)
.|-.|+..-|.-.-.|...|.++|.+|+.. ++ ...| -..+......+..|.+.
T Consensus 5 ~l~~a~~~qv~d~f~~~~~pl~~L~~AA~~-g~---------------~~~~-----------~~~~~~f~~~~~~l~~~ 57 (256)
T 1h6g_A 5 QLRKAVMDHVSDSFLETNVPLLVLIEAAKN-GN---------------EKEV-----------KEYAQVFREHANKLIEV 57 (256)
T ss_dssp HHHHHHGGGTTCTTTCCHHHHHHHHHHHHT-TC---------------HHHH-----------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHh-Cc---------------HHHH-----------HHHHHHHHHHHHHHHHH
Confidence 344444444444556778888888888766 11 1111 00123334444444555
Q ss_pred HHHhhcCC-CchhHhHHHHHhHHHHHHHHHHHHHhccc-cc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q psy9625 106 ADQVVSGG-EGAKLERLIVASHGVAASTAQLVVASRVK-AE-RNSVHLAALSQASRDVTNATGSVVATAKTCIH 176 (394)
Q Consensus 106 Ad~lv~g~-d~~~~E~li~AAk~VaAATaqLvaasrvK-a~-~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~ 176 (394)
|.-+.... |....+.++.+++++...|-||+.+.|+= .+ .....+..|+...+....++..|..++..+..
T Consensus 58 aklva~~s~~~~~~~~v~~aa~~~~~l~pQvv~aar~l~~~p~s~~a~E~l~~~~~~w~~~v~~L~~~vd~~~~ 131 (256)
T 1h6g_A 58 ANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITS 131 (256)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 55554332 36678888889999999999999998754 33 34577899998899999999999888876664
No 13
>3dyj_A Talin-1; helix bundles, cytoskeletal protein, integrin-bindin site, IBS2, cell membrane, cell projection, cytoplasm, cytoskeleton, membrane; 1.85A {Mus musculus} PDB: 4dj9_B
Probab=98.18 E-value=0.0017 Score=64.35 Aligned_cols=233 Identities=17% Similarity=0.170 Sum_probs=157.0
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCC-------chhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHHHHHH
Q psy9625 18 EKILDSCTTLMKAIRILVQKSPD-------DLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLIS 90 (394)
Q Consensus 18 e~iL~aa~~i~~a~~~Lv~~a~~-------~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swteGLIS 90 (394)
|++=.+++.+...+..|...++. +-.+....|+.|.+-+..+-.+||..+|.... +...++. -+.|=.
T Consensus 81 e~La~aa~~~a~~i~~La~~vK~gAAsl~~~d~~tQv~lLna~kdVa~al~~Li~atK~A~G----~~~~dpa-~~~Lk~ 155 (332)
T 3dyj_A 81 EKLAQAAQSSVATITRLADVVKLGAASLGAEDPETQVVLINAVKDVAKALGDLISATKAAAG----KVGDDPA-VWQLKN 155 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT----CCTTCHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhccC----CCCCChh-HHHHHH
Confidence 56666777777777777633211 12244466777777777777777777765543 1222222 467888
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHH----HHHHhccccccchHHHHHHHHHHHHHHHHHHH
Q psy9625 91 AAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQ----LVVASRVKAERNSVHLAALSQASRDVTNATGS 166 (394)
Q Consensus 91 AakaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaq----LvaasrvKa~~~s~~~~~L~~Aa~aVt~A~~~ 166 (394)
+++.+..+.+.|..+...+ .++-...-++++++... |-....+..+....+...|-++++-|+.|+..
T Consensus 156 aAk~mv~nV~sLlktVk~v--------ede~~rG~RaLEaai~~I~~el~~~~s~~~p~~~~tpE~li~~ak~vt~atak 227 (332)
T 3dyj_A 156 SAKVMVTNVTSLLKTVKAV--------EDEATKGTRALEATTEHIRQELAVFCSPEPPAKTSTPEDFIRMTKGITMATAK 227 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhh--------hccccchhHHHHHHHHHHHHHHHccCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Confidence 8888888888888875443 11111122233322222 22223445555566777888899999999988
Q ss_pred HHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchh---HHHHHhh
Q psy9625 167 VVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLE---RLIVASH 243 (394)
Q Consensus 167 LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E---~LIvaa~ 243 (394)
+|.+...+. -|.||.++...-.+...|+..+.+...... .++| +...+.+
T Consensus 228 aVaA~ns~~--------------------------qeDii~aan~~r~aV~dll~~~k~aa~~~~-~~~e~r~~~~~~~k 280 (332)
T 3dyj_A 228 AVAAGNSCR--------------------------QEDVIATANLSRRAIADMLRACKEAAFHPE-VAPDVRLRALHYGR 280 (332)
T ss_dssp HHHHHHHCC--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTSTT-SCHHHHHHHHHHHH
T ss_pred HHHhcCCCC--------------------------HHHHHHHHHhHHHHHHHHHHHHHHHHhccC-CCHHHHHHHHHHHH
Confidence 888876533 367888999999999999999988876541 2444 6888999
Q ss_pred hhHHHHHHHHHHHh-hccCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 244 GVAASTAQLVVASR-VKAERNSVHLAALSQASRDVTNATGSVVATAKT 290 (394)
Q Consensus 244 eVAAsTAQLv~Asr-VKa~~~S~~~~~L~~Ask~V~~At~~LV~avk~ 290 (394)
+++.+---|+.+-+ .-.+|..+....|..+||.|..+..+||.+++.
T Consensus 281 ~~a~~~~~LL~~v~~~~~~P~~~~k~~L~~~Sr~VA~aVteLV~aa~~ 328 (332)
T 3dyj_A 281 ECANGYLELLDHVLLTLQKPNPDLKQQLTGHSKRVAGSVTELIQAAEA 328 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99988888888654 223676677789999999999999999998854
No 14
>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A
Probab=98.14 E-value=0.00024 Score=79.62 Aligned_cols=272 Identities=15% Similarity=0.159 Sum_probs=175.6
Q ss_pred cccchHHHHHHHHHHHHHHHHHhcC-----CCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchh-----
Q psy9625 14 LEVNEKILDSCTTLMKAIRILVQKS-----PDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQ----- 83 (394)
Q Consensus 14 l~v~e~iL~aa~~i~~a~~~Lv~~a-----~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~s----- 83 (394)
-+.-+.|+.+++.|-.-+..||.++ .++...++.+|...++...+.-..|...-++..+ ...||.-...
T Consensus 655 ~~~~~~i~~aa~~l~~~t~~lv~aar~~~~~p~n~~Ak~~l~~~~~~~~~~v~~L~~~V~~i~d-l~~f~aas~~~i~ed 733 (1066)
T 1tr2_A 655 KSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAID-TKSLLDASEEAIKKD 733 (1066)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCTHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-HHHHHHHHHHHHHHH
Confidence 3456788888888888888888863 3566778899999999999999999666655433 5678876432
Q ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chhHhHHHHHhHHHHHHHHHHHHHhccc--cccchHH
Q psy9625 84 -----------WTEGLISAAKAVAMSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASRVK--AERNSVH 149 (394)
Q Consensus 84 -----------wteGLISAakaVa~a~~~Lve~Ad~lv~g~d-~~~~E~li~AAk~VaAATaqLvaasrvK--a~~~s~~ 149 (394)
--++|..++..++..++.|++.++..+.-.+ .+..+.++.+++.+..+...|+...+.= .+.+...
T Consensus 734 ~~~~~~a~~~~~~~~l~~~a~~i~~~~~~l~~vv~~~~~~s~~p~~q~~v~~a~k~l~~s~~~li~~aK~~a~~p~d~~~ 813 (1066)
T 1tr2_A 734 LDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGL 813 (1066)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCTTT
T ss_pred HHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCChHH
Confidence 1136778888888899999999988876654 5566778889999999999999875321 2223345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------hHHHHHHHHhc-CC-----------CC-Ccc--chh-----------
Q psy9625 150 LAALSQASRDVTNATGSVVATAKTC--------IHLAEIIMAHH-GS-----------AS-NTR--EFY----------- 195 (394)
Q Consensus 150 ~~~L~~Aa~aVt~A~~~LV~aA~~a--------q~~~EiV~qg~-gs-----------~~-~t~--~fy----------- 195 (394)
...|..+++.|-.++..|+++++.. ..+..|. ++. +. .+ +.. ..+
T Consensus 814 ~~~l~~~~k~v~~~V~~l~~av~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~e~~e~~~~~~~~~ 892 (1066)
T 1tr2_A 814 QKSFLDSGYRILGAVAKVREAFQPQEPDFPPPPPDLEQLR-LTDELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGE 892 (1066)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCC----------------------------------CCCCCCCCCCCSSC
T ss_pred HHHHHHhhHHHHHHHHHHHHHHhccCCccCCCCccHHHHh-hcccCCCCCCCCcccccCCCCCCCChhhhhhccchhccc
Confidence 6778889999999999999887531 1111121 110 00 00 000 111
Q ss_pred --------------ccccch---hhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhh
Q psy9625 196 --------------KRNHQW---TEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRV 258 (394)
Q Consensus 196 --------------~k~~~W---teGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrV 258 (394)
..-.+| .+.||.+||.++..+-.|.+. +.|.+ ++-++||.+|+.++.+-..|.--+|.
T Consensus 893 ~~~~~i~~~~~~l~~e~~kW~~~~ndiI~~AK~ma~~m~~m~~~----~~g~~-~~~~d~i~~Ak~ia~~~~~l~~~~r~ 967 (1066)
T 1tr2_A 893 VINQPMMMAARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRL----VRGGS-GTKRALIQCAKDIAKASDEVTRLAKE 967 (1066)
T ss_dssp SCCHHHHHHHHHHHHHHTTBCCTTCHHHHHHHHHHHHHHTHHHH----TSCCS-SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHHHHH----hccCC-CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011246 346778888777776555553 33442 57777777777777777666665554
Q ss_pred ccC--CCchhHHHHHHHHHHHHHHH--HHHHHHHHHHH
Q psy9625 259 KAE--RNSVHLAALSQASRDVTNAT--GSVVATAKTCI 292 (394)
Q Consensus 259 Ka~--~~S~~~~~L~~Ask~V~~At--~~LV~avk~~~ 292 (394)
=++ +++....+|......+...| -+++.+||...
T Consensus 968 ~a~~~~d~~~k~~ll~~~~~i~~~~~QL~ils~VKa~~ 1005 (1066)
T 1tr2_A 968 VAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATM 1005 (1066)
T ss_dssp HHHTBCBHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCHHHHHHHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence 332 44555666666666666666 45555565544
No 15
>1tr2_A Vinculin isoform 1; actin-binding, cell adhesion; 2.90A {Homo sapiens} PDB: 1st6_A
Probab=97.96 E-value=0.0021 Score=72.14 Aligned_cols=260 Identities=13% Similarity=0.157 Sum_probs=172.5
Q ss_pred hHHHHHHHHHHHHHHHHHh---cC-CCch--hhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHH-----
Q psy9625 18 EKILDSCTTLMKAIRILVQ---KS-PDDL--DIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTE----- 86 (394)
Q Consensus 18 e~iL~aa~~i~~a~~~Lv~---~a-~~~~--~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swte----- 86 (394)
..||+.|+.|......|+. .+ ..|. ......|..+.+...+.-++++... ..+.|.....--.
T Consensus 539 ~~~l~~~k~v~~~s~qLl~~a~~~~~~~P~a~~~~~~L~~a~~~L~~~i~~~a~~~------i~d~f~d~~~~l~~L~ea 612 (1066)
T 1tr2_A 539 QDLLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKARMQEAMTQE------VSDVFSDTTTPIKLLAVA 612 (1066)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCSSCSHHHHHHHHHHTHHHHHHHHHHHHHHHH------HHHHTTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH------HhhhHhhhhhHHHHHHHH
Confidence 6789999999998888882 22 1121 2333445444444333222222110 0111221111112
Q ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHhhcCCC--chhHhHHHHHhHHHHHHHHHHHHHhcccc--ccchHHH
Q psy9625 87 ------------GLISAAKAVAMSAKYLLTAADQVVSGGE--GAKLERLIVASHGVAASTAQLVVASRVKA--ERNSVHL 150 (394)
Q Consensus 87 ------------GLISAakaVa~a~~~Lve~Ad~lv~g~d--~~~~E~li~AAk~VaAATaqLvaasrvKa--~~~s~~~ 150 (394)
.+...+..+....+.|++.++.+..++. ....+.++.+++.|...|.+|+.++|.-. +.+....
T Consensus 613 a~~~~~~~~~~~~~~~~a~~~~~~~~~L~~~a~~~~~~~~~~~~~~~~i~~aa~~l~~~t~~lv~aar~~~~~p~n~~Ak 692 (1066)
T 1tr2_A 613 ATAPPDAPNREEVFDERAANFENHSGKLGATAEKAAAVGTANKSTVEGIQASVKTARELTPQVVSAARILLRNPGNQAAY 692 (1066)
T ss_dssp HHSCTTCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCSCTHHH
T ss_pred HhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCCCHHHH
Confidence 4455667788888888888888766542 45678888899999999999999986442 3455778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccc---------cchhhhHHHHHHHHHHHHHHHHH
Q psy9625 151 AALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRN---------HQWTEGLISAAKAVAMSAKYLLT 221 (394)
Q Consensus 151 ~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~---------~~WteGLISAAk~Va~at~~Lve 221 (394)
..|....+.+.+++..|..++..+..+.+++..-. .+..+| +.=.++|..+|+.++..++.||+
T Consensus 693 ~~l~~~~~~~~~~v~~L~~~V~~i~dl~~f~aas~-------~~i~ed~~~~~~a~~~~~~~~l~~~a~~i~~~~~~l~~ 765 (1066)
T 1tr2_A 693 EHFETMKNQWIDNVEKMTGLVDEAIDTKSLLDASE-------EAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILL 765 (1066)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHH-------HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCHHHHHHHHH-------HHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999776665544333322110 000000 11125899999999999999999
Q ss_pred HHHHhhcCCCCC-chhHHHHHhhhhHHHHHHHHHHHhhcc-C-CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 222 AADQVVSGGEGA-KLERLIVASHGVAASTAQLVVASRVKA-E-RNSVHLAALSQASRDVTNATGSVVATAKT 290 (394)
Q Consensus 222 aA~~~v~g~~~~-~~E~LIvaa~eVAAsTAQLv~AsrVKa-~-~~S~~~~~L~~Ask~V~~At~~LV~avk~ 290 (394)
.++..+.-.+++ -.+.|+.+++.|+.+..+||.+.+.=+ + .+.+.+..|..+++.|-.+...|+++++.
T Consensus 766 vv~~~~~~s~~p~~q~~v~~a~k~l~~s~~~li~~aK~~a~~p~d~~~~~~l~~~~k~v~~~V~~l~~av~~ 837 (1066)
T 1tr2_A 766 VAKREVENSEDPKFREAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQP 837 (1066)
T ss_dssp HHHHHHHTBCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCChHHHHHHHHhhHHHHHHHHHHHHHHhc
Confidence 999988875211 236899999999999999999774222 3 33456899999999999999999887754
No 16
>3fyq_A CG6831-PA (talin); 5-helix bundle, cell adhesion; 1.95A {Drosophila melanogaster}
Probab=97.42 E-value=0.014 Score=53.99 Aligned_cols=119 Identities=18% Similarity=0.209 Sum_probs=83.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHh
Q psy9625 147 SVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQV 226 (394)
Q Consensus 147 s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~ 226 (394)
+.++..+-..++++...++.||..+...| |-|=.||+..+.....|.++....
T Consensus 43 ~~~qe~Ilk~Ak~Lvedtk~LV~~a~~tQ---------------------------e~LA~aa~~~v~~i~~La~~vK~g 95 (199)
T 3fyq_A 43 ADHREHILQTAKALVEDTKVLVTGAAGTQ---------------------------DQLANAAQNAVSTITQLAEAVKRG 95 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSSCH---------------------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccCCH---------------------------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455455578888888888888877666 234556677777776666654432
Q ss_pred --hcCC-CCCchhHHHHHhhhhHHHHHHHHHHHhhccC-C-CchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 227 --VSGG-EGAKLERLIVASHGVAASTAQLVVASRVKAE-R-NSVHLAALSQASRDVTNATGSVVATAKTCI 292 (394)
Q Consensus 227 --v~g~-~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~-~-~S~~~~~L~~Ask~V~~At~~LV~avk~~~ 292 (394)
.-|. ...+...|+.++|.|+++-.+|+.|+|.=.. | +.+.+..|..+++.+-.....|.+.|+.+.
T Consensus 96 AAsl~s~dp~tQv~LLna~kdVa~aL~~Li~atK~a~g~~~~d~~~~~Lk~sak~~~~nV~sLl~tV~~v~ 166 (199)
T 3fyq_A 96 ACSLGSTQPDSQVMVINAVKDVASALGDLINCTKLASGKSINDPSMQDLKESARVMVLNVSSLLKTVKAVE 166 (199)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 1121 0135589999999999999999999976443 3 567899999999999999999999887663
No 17
>2l7n_A Talin-1; integrin, bundle, focal adhesion, structural protein; NMR {Mus musculus}
Probab=97.08 E-value=0.022 Score=51.50 Aligned_cols=77 Identities=21% Similarity=0.199 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCchh---HHHHHhhhhHHHHHHHHHHHh--hccCCCchhHHHHHHHHHHHHHHHH
Q psy9625 208 AAKAVAMSAKYLLTAADQVVSGGEGAKLE---RLIVASHGVAASTAQLVVASR--VKAERNSVHLAALSQASRDVTNATG 282 (394)
Q Consensus 208 AAk~Va~at~~LveaA~~~v~g~~~~~~E---~LIvaa~eVAAsTAQLv~Asr--VKa~~~S~~~~~L~~Ask~V~~At~ 282 (394)
+|+.++.+...|..++.++.... ..++ .||.++++|--..++|+-..| +.-..+-+.+.+|.+++|.|..+..
T Consensus 81 aar~~A~aL~~lt~avrgvaatt--~d~~~q~~ll~~a~~V~~~s~~Li~ear~~~~~p~d~~~~~~L~~~ak~vs~aL~ 158 (168)
T 2l7n_A 81 AARDVAGGLRSLAQAARGVAALT--SDPAVQAIVLDTASDVLDKASSLIEEAKKASGHPGDPESQQRLAQVAKAVTQALN 158 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTBSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555 3333 477777777777777777766 2222244566788888888888766
Q ss_pred HHHH
Q psy9625 283 SVVA 286 (394)
Q Consensus 283 ~LV~ 286 (394)
.+|.
T Consensus 159 ~~v~ 162 (168)
T 2l7n_A 159 RCVS 162 (168)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6654
No 18
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=97.07 E-value=0.036 Score=49.67 Aligned_cols=138 Identities=16% Similarity=0.240 Sum_probs=97.8
Q ss_pred HhHHHHHHHHHHHHHhcc-ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchh
Q psy9625 124 ASHGVAASTAQLVVASRV-KAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWT 202 (394)
Q Consensus 124 AAk~VaAATaqLvaasrv-Ka~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~Wt 202 (394)
+.+.|..++..|..-.-+ -.......|..|..|+..+..|+..||.+++...
T Consensus 13 Ai~~I~~as~~l~~~~~~~~~~~~~~~Q~eL~~aA~~Ln~A~~~vv~aargsp--------------------------- 65 (158)
T 2l10_A 13 ALRAVGDASKRLLSDLLPPSTGTFQEAQSRLNEAAAGLNQAATELVQASRGTP--------------------------- 65 (158)
T ss_dssp HHHHHHHHHHHHTTTCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH---------------------------
T ss_pred HHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH---------------------------
Confidence 445566666665433211 1224567788888888888888888888876222
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCchhHHHHHhhhhHHHHHHHHHHHhh-ccCCCchhH-HHHHHHHHHHHH
Q psy9625 203 EGLISAAKAVAMSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASRV-KAERNSVHL-AALSQASRDVTN 279 (394)
Q Consensus 203 eGLISAAk~Va~at~~LveaA~~~v~g~~-~~~~E~LIvaa~eVAAsTAQLv~AsrV-Ka~~~S~~~-~~L~~Ask~V~~ 279 (394)
.+|-.++|.-+.+-..|+.+...+..... ...-+++|..-++|..+..+|+.+.+. -+||..++. ..|..|.|.|++
T Consensus 66 ~~La~as~~f~~~~~~l~~ag~~mag~~~~~~~r~~iv~~L~~vs~~s~~LL~~ak~~~~dp~~pn~~~~L~sAaR~Vte 145 (158)
T 2l10_A 66 QDLARASGRFGQDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKLLLAAKALSTDPASPNLKSQLAAAARAVTD 145 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHH
Confidence 24555666667777777777776555441 012458999999999999999988754 348988887 778899999999
Q ss_pred HHHHHHHHH
Q psy9625 280 ATGSVVATA 288 (394)
Q Consensus 280 At~~LV~av 288 (394)
....||..+
T Consensus 146 sIN~Lv~~c 154 (158)
T 2l10_A 146 SINQLITMC 154 (158)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999875
No 19
>1u89_A Talin 1, talin; 4-helix bundle, LEFT-handed, structural protein; NMR {Mus musculus} SCOP: a.216.1.1
Probab=97.04 E-value=0.011 Score=52.11 Aligned_cols=115 Identities=16% Similarity=0.172 Sum_probs=78.7
Q ss_pred hhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHhHHHH
Q psy9625 44 IASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIV 123 (394)
Q Consensus 44 ~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swteGLISAakaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~ 123 (394)
.+...|+.|.+.+..+=++|+...|...+... .-.++ ++. -..+-.++..|+.. .+..++.+.
T Consensus 12 ~~~~~l~~AA~~Vt~aL~dLL~hik~~~~~~~----~~~~~-~~~---~d~Il~~t~~l~~s---------~gd~~eMvr 74 (139)
T 1u89_A 12 QLLRGVGAAATAVTQALNELLQHVKAHATGAG----PAGRY-DQA---TDTILTVTENIFSS---------MGDAGEMVR 74 (139)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHTTSSCCSS----SCSCC-HHH---HHHHHHHHHHHHHT---------TTTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccc----cchhh-hhH---HHHHHHHHHHHHHh---------cCCHHHHHH
Confidence 45556778888888888888888775422100 11111 221 13333344444332 334566666
Q ss_pred HhHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy9625 124 ASHGVAASTAQLVVASRVKAE--RNSVHLAALSQASRDVTNATGSVVATAKTCI 175 (394)
Q Consensus 124 AAk~VaAATaqLvaasrvKa~--~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq 175 (394)
.++.++-+|.+|+...|-.++ ++..++.+|-.|++.|.+||..||.+++.|.
T Consensus 75 qak~Laqat~~LV~~iK~eAe~~~D~~~q~rLL~AAk~lAdATa~mVeAAk~~a 128 (139)
T 1u89_A 75 QARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAA 128 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999876544 4567888888899999999999999999887
No 20
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=96.98 E-value=0.0032 Score=54.92 Aligned_cols=76 Identities=22% Similarity=0.252 Sum_probs=63.9
Q ss_pred HHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhhccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 217 KYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAE--RNSVHLAALSQASRDVTNATGSVVATAKTCIHL 294 (394)
Q Consensus 217 ~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~--~~S~~~~~L~~Ask~V~~At~~LV~avk~~~~~ 294 (394)
..+....+.+++.. +.++++|..++.++-.|.+||-..|-.++ .+...+++|-.|++.|.+|+..||.++|.+...
T Consensus 23 ~~il~~t~~l~~s~--~~p~~Mv~~ak~iAr~a~~Li~~~K~eAd~seDp~~~~rLl~AAk~La~At~~MVeaAK~~A~N 100 (131)
T 2l7a_A 23 DTILTVTENIFSSM--GDAGEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAH 100 (131)
T ss_dssp HHHHHHHHHHHHHT--TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44444555566666 79999999999999999999999987665 456779999999999999999999999999764
No 21
>1zw2_B Talin, metavinculin; complex, protein binding; 2.10A {Gallus gallus}
Probab=96.63 E-value=0.0011 Score=42.69 Aligned_cols=21 Identities=24% Similarity=0.415 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCC
Q psy9625 20 ILDSCTTLMKAIRILVQKSPD 40 (394)
Q Consensus 20 iL~aa~~i~~a~~~Lv~~a~~ 40 (394)
||++|+.|+.|+..||++|+.
T Consensus 1 IL~aak~i~~a~~~Lvk~A~a 21 (26)
T 1zw2_B 1 ILEAAKSIAAATSALVKAASA 21 (26)
T ss_dssp CHHHHHHHHHHHHHHHHHTTC
T ss_pred CchHHHHHHHHHHHHHHHhhh
Confidence 799999999999999999999
No 22
>3vf0_A Vinculin, metavinculin; cytoskeletal F-actin binding protein, CEL adhesion-protein binding complex; HET: EPE; 2.54A {Homo sapiens}
Probab=96.47 E-value=0.023 Score=55.06 Aligned_cols=138 Identities=21% Similarity=0.225 Sum_probs=99.6
Q ss_pred ccchHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCc---chhhhhhchhhH-HHHHH
Q psy9625 15 EVNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASN---TREFYKRNHQWT-EGLIS 90 (394)
Q Consensus 15 ~v~e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~---~~~Fy~~~~swt-eGLIS 90 (394)
..|..|+.++..|..-+. +|... .++||..++..+.. ..+|-++.+ ++ .+||.
T Consensus 110 p~~~pi~~Aa~~ld~Ev~---KWdd~-------------------~NdII~~AK~MA~mM~~Ms~ftRGg~-kTt~DLI~ 166 (283)
T 3vf0_A 110 PVNQPILAAAQSLHREAT---KWSSK-------------------GNDIIAAAKRMALLMAEMSRLVRGGS-GTKRALIQ 166 (283)
T ss_dssp CCCHHHHHHHHHHHHHHH---TBCCT-------------------TCHHHHHHHHHHHHHHHHHHHTTCCT-THHHHHHH
T ss_pred CCCcchHHHHHHHHHHHH---hhccC-------------------CChHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHH
Confidence 467789999998887554 66555 55666666555443 345555545 66 99999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCC-CchhHhHHHHHhHHHHHHHHHHHHHhcccccc----c------hHHHHHHHHHHHH
Q psy9625 91 AAKAVAMSAKYLLTAADQVVSGG-EGAKLERLIVASHGVAASTAQLVVASRVKAER----N------SVHLAALSQASRD 159 (394)
Q Consensus 91 AakaVa~a~~~Lve~Ad~lv~g~-d~~~~E~li~AAk~VaAATaqLvaasrvKa~~----~------s~~~~~L~~Aa~a 159 (394)
+|+.++...+.|...+..+...- |...-+.|+.....|---..||-..++||+.. + .....-|-.+++-
T Consensus 167 ~AK~IAe~g~~l~k~ar~iA~qCtD~r~K~~LL~~lerIpti~~QLkIls~VKA~~lg~q~~s~~~~~sa~esLIqnAKN 246 (283)
T 3vf0_A 167 CAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQN 246 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHhhhhhHHHHHHHHHHhcccccccccccchhhHHHHHHHHHHHHH
Confidence 99999999999999999986542 23445777888899999999999999999752 1 1123334447777
Q ss_pred HHHHHHHHHHHHHHhh
Q psy9625 160 VTNATGSVVATAKTCI 175 (394)
Q Consensus 160 Vt~A~~~LV~aA~~aq 175 (394)
+-+++..+|+++-.|.
T Consensus 247 LM~aV~~tVka~eaAS 262 (283)
T 3vf0_A 247 LMQSVKETVREAEAAS 262 (283)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777777665
No 23
>1h6g_A Alpha-1 catenin; adhesion modulation, cytoskeleton; 2.2A {Homo sapiens} SCOP: a.24.9.1 a.24.9.1 PDB: 1l7c_A
Probab=96.43 E-value=0.63 Score=44.02 Aligned_cols=180 Identities=12% Similarity=0.091 Sum_probs=121.1
Q ss_pred hhchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chhHhHHHHHhHHHHHHHHHHHHHhccccccchHHHHHHHHHH
Q psy9625 79 KRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLAALSQAS 157 (394)
Q Consensus 79 ~~~~swteGLISAakaVa~a~~~Lve~Ad~lv~g~d-~~~~E~li~AAk~VaAATaqLvaasrvKa~~~s~~~~~L~~Aa 157 (394)
..+..-.+.++.++..+...+..|+.++.-+.+--+ ....|.+-...++.+.+...|..++.-=.+ ...-|..+.
T Consensus 65 s~~~~~~~~v~~aa~~~~~l~pQvv~aar~l~~~p~s~~a~E~l~~~~~~w~~~v~~L~~~vd~~~~----~~~fl~ase 140 (256)
T 1h6g_A 65 SNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITS----IDDFLAVSE 140 (256)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----SHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----hHHHHHHHH
Confidence 344555588899999999999999999987653322 444567766777888888888777521111 112222121
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCchh
Q psy9625 158 RDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGE-GAKLE 236 (394)
Q Consensus 158 ~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~-~~~~E 236 (394)
..+. +-...|. +++..| =.++++..|+.++..++.||+.+..-+-..+ ..--+
T Consensus 141 ~~i~-------~~~~~c~---~al~~~----------------d~~~~~~~a~~i~~~a~rv~~v~k~e~d~~ed~~~~~ 194 (256)
T 1h6g_A 141 NHIL-------EDVNKCV---IALQEK----------------DVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTE 194 (256)
T ss_dssp HHHH-------HHHHHHH---HHHHTT----------------CHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCSSHHHH
T ss_pred HHHH-------HHHHHHH---HHHHcC----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Confidence 1111 2222222 112111 1358888999999999999999998776552 12457
Q ss_pred HHHHHhhhhHHH-HHHHHHHHhh-----ccCCCch-hHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 237 RLIVASHGVAAS-TAQLVVASRV-----KAERNSV-HLAALSQASRDVTNATGSVVATA 288 (394)
Q Consensus 237 ~LIvaa~eVAAs-TAQLv~AsrV-----Ka~~~S~-~~~~L~~Ask~V~~At~~LV~av 288 (394)
+|..+++.++.+ |.++|-+++. =.+|+++ .+..|..+++.|..+++.+=.++
T Consensus 195 ~v~~a~~~L~~a~~p~mv~~ak~~~~~~a~np~d~~~~~~~~~a~~~L~~~v~~vr~av 253 (256)
T 1h6g_A 195 KVLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAV 253 (256)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSSCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999987 8999988877 5677774 58999999999998888876654
No 24
>4f7g_B Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} PDB: 2kbb_A 2kgx_A
Probab=96.42 E-value=0.39 Score=45.00 Aligned_cols=122 Identities=16% Similarity=0.117 Sum_probs=92.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHH
Q psy9625 146 NSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQ 225 (394)
Q Consensus 146 ~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~ 225 (394)
....+..+...++.+...+..|..+++.-. |.|=.+++.++....-|+.++-+
T Consensus 64 ~~~~qeq~~~~~~eL~~~i~~l~~AAk~~~---------------------------e~LG~av~~~a~~~epLv~aa~g 116 (216)
T 4f7g_B 64 QEALHTQMLTAVQEISHLIEPLASAARAEA---------------------------SQLGHKVSQMAQYFEPLTLAAVG 116 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCH---------------------------HHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHhhhcCH---------------------------HHHhHHHHHHHHHhHHHHHHHHH
Confidence 345667777789999999999999988554 44556777777777777777777
Q ss_pred hhcCCCC-CchhHHHHHhhhhHHHHHHHHHHHhhcc-CCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 226 VVSGGEG-AKLERLIVASHGVAASTAQLVVASRVKA-ERN--SVHLAALSQASRDVTNATGSVVATAKTCIHL 294 (394)
Q Consensus 226 ~v~g~~~-~~~E~LIvaa~eVAAsTAQLv~AsrVKa-~~~--S~~~~~L~~Ask~V~~At~~LV~avk~~~~~ 294 (394)
..+-..+ .....|+..+|.|+.+.-|||.|||.-- +|. ......|..|...+++|.+.|..........
T Consensus 117 aAS~t~ds~~Q~~lLdq~Ktv~es~lqlv~AaK~agGNPk~a~~~H~~l~eaa~~l~eai~d~~~tl~~~ase 189 (216)
T 4f7g_B 117 AASKTLSHPQQMALLDQTKTLAESALQLLYTAKEAGGNPKQAAHTQEALEEAVQMMTEAVEDLTTTLNEAASA 189 (216)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6554410 1356799999999999999999997733 455 3346889999999999999999988776543
No 25
>2l7a_A Talin-1; vinculin, bundle, focal adhesion, integrin, cell ADHE; NMR {Mus musculus}
Probab=96.21 E-value=0.032 Score=48.64 Aligned_cols=82 Identities=22% Similarity=0.252 Sum_probs=64.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCchhHHHHHhhhhHHHHHHHHHHHhhcc-CCCc-hhHHHHHHHHHHHHH
Q psy9625 203 EGLISAAKAVAMSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASRVKA-ERNS-VHLAALSQASRDVTN 279 (394)
Q Consensus 203 eGLISAAk~Va~at~~LveaA~~~v~g~~-~~~~E~LIvaa~eVAAsTAQLv~AsrVKa-~~~S-~~~~~L~~Ask~V~~ 279 (394)
+.+|-.+|.++.+++.||..+..-.-... ...-++|+.+++.|+.+|+.||-++|-=+ +|++ ..+..|..|+..+..
T Consensus 40 ~~Mv~~ak~iAr~a~~Li~~~K~eAd~seDp~~~~rLl~AAk~La~At~~MVeaAK~~A~NP~d~~~q~~Lr~Aae~L~~ 119 (131)
T 2l7a_A 40 GEMVRQARILAQATSDLVNAIKADAEGESDLENSRKLLSAAKILADATAKMVEAAKGAAAHPDSEEQQQRLREAAEGLRM 119 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 45677899999999999998886554441 12358999999999999999999996544 6877 558999988887776
Q ss_pred HHHHH
Q psy9625 280 ATGSV 284 (394)
Q Consensus 280 At~~L 284 (394)
++...
T Consensus 120 at~~~ 124 (131)
T 2l7a_A 120 ATNAA 124 (131)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66543
No 26
>3fyq_A CG6831-PA (talin); 5-helix bundle, cell adhesion; 1.95A {Drosophila melanogaster}
Probab=95.90 E-value=0.12 Score=47.92 Aligned_cols=136 Identities=23% Similarity=0.278 Sum_probs=94.8
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhhcc----CCCchhHHHHHHHHHH
Q psy9625 201 WTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKA----ERNSVHLAALSQASRD 276 (394)
Q Consensus 201 WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa----~~~S~~~~~L~~Ask~ 276 (394)
.-|.++..||.+.+.+..||.. .. ++.|+|-.+++..+....+|.=+.|.-+ ..++.+|..|-.|+|.
T Consensus 45 ~qe~Ilk~Ak~Lvedtk~LV~~-------a~-~tQe~LA~aa~~~v~~i~~La~~vK~gAAsl~s~dp~tQv~LLna~kd 116 (199)
T 3fyq_A 45 HREHILQTAKALVEDTKVLVTG-------AA-GTQDQLANAAQNAVSTITQLAEAVKRGACSLGSTQPDSQVMVINAVKD 116 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-------TS-SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-------cc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 3456667777766666666654 32 6999999999999999999988776654 2467899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccCccc------------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9625 277 VTNATGSVVATAKTCIHLVDESADDLD------------IASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRHH 344 (394)
Q Consensus 277 V~~At~~LV~avk~~~~~~~~~~~~~d------------~s~ls~~~~k~~emE~Qv~ILklE~eLe~aR~kL~~iRk~~ 344 (394)
|..++..||.+.|.+.....+ +..|+ ++.| .--.|.-|=|++-=+-.||.-.+.=|+.|..|..+|
T Consensus 117 Va~aL~~Li~atK~a~g~~~~-d~~~~~Lk~sak~~~~nV~sL-l~tV~~v~de~~rG~raLe~~i~~I~~el~~~~~~~ 194 (199)
T 3fyq_A 117 VASALGDLINCTKLASGKSIN-DPSMQDLKESARVMVLNVSSL-LKTVKAVEDEHTRGTRAMEATVEAISQEIRALEHHH 194 (199)
T ss_dssp HHHHHHHHHHHHHHHC--------CHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhhhccCCCCC-chHHHHHHHHHHHHHHHHHHH-HHHHHhhhcchhhhHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999998654311 12222 1111 111344466777778899999999999999998776
Q ss_pred hh
Q psy9625 345 LL 346 (394)
Q Consensus 345 Y~ 346 (394)
.+
T Consensus 195 ~~ 196 (199)
T 3fyq_A 195 HH 196 (199)
T ss_dssp --
T ss_pred cc
Confidence 54
No 27
>1qkr_A Vinculin, tail domain; actin cytoskeleton, cell adhesion, helical bundle, lipid binding; 1.8A {Gallus gallus} SCOP: a.24.9.1 PDB: 3h2u_A 3h2v_A 1rke_B 3myi_A
Probab=95.67 E-value=0.061 Score=49.46 Aligned_cols=138 Identities=18% Similarity=0.193 Sum_probs=98.5
Q ss_pred cchHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHHHccCCCCc---chhhhhhchhhHHHHHHHH
Q psy9625 16 VNEKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIMAHHGSASN---TREFYKRNHQWTEGLISAA 92 (394)
Q Consensus 16 v~e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~---~~~Fy~~~~swteGLISAa 92 (394)
++..|..++..+-.-+. +|... .++||..++..+.. ...|.++.+.-+.+||.+|
T Consensus 16 ~~~~i~~aa~~l~~E~~---KW~~~-------------------~NdII~~Ak~Ma~~m~~M~~ftrG~g~t~~dlI~~A 73 (188)
T 1qkr_A 16 INQPMMMAARQLHDEAR---KWSSK-------------------GNDIIAAAKRMALLMAEMSRLVRGGSGNKRALIQCA 73 (188)
T ss_dssp HHCHHHHHHHHHHHHHT---TBCCT-------------------TCHHHHHHHHHHHHHHHHHHHTTSCGGGHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHh---cccCC-------------------CCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHH
Confidence 45667777777666544 55554 45566665554443 3467666665569999999
Q ss_pred HHHHHHHHHHHHHHHHhhcC-CCchhHhHHHHHhHHHHHHHHHHHHHhccccccc------hH----HHHHHHHHHHHHH
Q psy9625 93 KAVAMSAKYLLTAADQVVSG-GEGAKLERLIVASHGVAASTAQLVVASRVKAERN------SV----HLAALSQASRDVT 161 (394)
Q Consensus 93 kaVa~a~~~Lve~Ad~lv~g-~d~~~~E~li~AAk~VaAATaqLvaasrvKa~~~------s~----~~~~L~~Aa~aVt 161 (394)
+.++...+.|...+..+... .|...-+.|+.....|.--..||-..++||+... +. ...-|-.+++.+-
T Consensus 74 k~iAe~~~~l~k~ar~iA~qc~D~~~k~~Ll~~~~rI~t~~~QLkIls~VKA~~~g~~~~~~~~~~~a~e~LIq~AkNLM 153 (188)
T 1qkr_A 74 KDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQATEMLVHNAQNLM 153 (188)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHhhhHHHHHHHHHHHhccccccccccccchhhHHHHHHHHHHHHHH
Confidence 99999999999999988654 2355667788899999999999999999997642 11 1334445777777
Q ss_pred HHHHHHHHHHHHhh
Q psy9625 162 NATGSVVATAKTCI 175 (394)
Q Consensus 162 ~A~~~LV~aA~~aq 175 (394)
+++..+|+++-.|.
T Consensus 154 ~aV~~tVka~~~as 167 (188)
T 1qkr_A 154 QSVKETVREAEAAS 167 (188)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777777665
No 28
>1sj7_A Talin 1; structural protein; 2.50A {Mus musculus} SCOP: a.215.1.1
Probab=95.16 E-value=0.025 Score=51.46 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcCCCchhhhhHHHHHHhhhhHHHHHHHHH
Q psy9625 18 EKILDSCTTLMKAIRILVQKSPDDLDIASLSLHQARRLEMEAQAEIIM 65 (394)
Q Consensus 18 e~iL~aa~~i~~a~~~Lv~~a~~~~~~~~~~~~~~~~~~~eaQ~eLV~ 65 (394)
..||++++.|..||+.|++.+.+.+.+||++|++|+.+++++-.+|+.
T Consensus 125 ~~Ll~Aar~L~~A~s~lLk~~~p~~~~~rq~ll~AA~~Vg~as~~lL~ 172 (174)
T 1sj7_A 125 RPLLQAAKGLAGAVSELLRSAQPASAEPRQNLLQAAGNVGQASGELLQ 172 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcccchHHHHHHHHHHHHHHHHHHHh
Confidence 379999999999999999999999999999999999999999888764
No 29
>1u6h_B Talin; protein-protein complex, cell adhesion; 2.38A {Gallus gallus}
Probab=94.83 E-value=0.014 Score=39.08 Aligned_cols=29 Identities=28% Similarity=0.286 Sum_probs=20.4
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHHHh
Q psy9625 198 NHQWTEGLISAAKAVAMSAKYLLTAADQV 226 (394)
Q Consensus 198 ~~~WteGLISAAk~Va~at~~LveaA~~~ 226 (394)
|+.|-+-|+++||.|+.+|..|||+|.+.
T Consensus 1 D~~~q~rLl~aak~vaeata~mVeaak~~ 29 (31)
T 1u6h_B 1 DLENSRKLLSAAKILADATAKMVEAAKGA 29 (31)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35566778889999999999998888654
No 30
>2l10_A Talin-1; helical bundle, cytoskeleton, focal adhesion, structu protein; NMR {Mus musculus}
Probab=93.41 E-value=4.1 Score=36.34 Aligned_cols=138 Identities=17% Similarity=0.218 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHHHHHhcCCC----chhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHHHHHHHHHHHH
Q psy9625 21 LDSCTTLMKAIRILVQKSPD----DLDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVA 96 (394)
Q Consensus 21 L~aa~~i~~a~~~Lv~~a~~----~~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swteGLISAakaVa 96 (394)
=++.+.|-.+...|....-+ -.++..-.|.+|+..-.++-.++|...|++. .+|-.+++...
T Consensus 11 d~Ai~~I~~as~~l~~~~~~~~~~~~~~~Q~eL~~aA~~Ln~A~~~vv~aargsp--------------~~La~as~~f~ 76 (158)
T 2l10_A 11 DNALRAVGDASKRLLSDLLPPSTGTFQEAQSRLNEAAAGLNQAATELVQASRGTP--------------QDLARASGRFG 76 (158)
T ss_dssp HHHHHHHHHHHHHHTTTCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH--------------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhhcCH--------------HHHHHHHHHHH
Confidence 34456666766666443321 2345555788988889999999999887662 25566667777
Q ss_pred HHHHHHHHHHHHhhcCCC-chhHhHHHHHhHHHHHHHHHHHHHhccc-cccch-HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 97 MSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASRVK-AERNS-VHLAALSQASRDVTNATGSVVATAK 172 (394)
Q Consensus 97 ~a~~~Lve~Ad~lv~g~d-~~~~E~li~AAk~VaAATaqLvaasrvK-a~~~s-~~~~~L~~Aa~aVt~A~~~LV~aA~ 172 (394)
.+-..|+...-.+..... ...-++++..-++|...+.+|+.+.+.- +++.. .-...|..|+++||..+..||...+
T Consensus 77 ~~~~~l~~ag~~mag~~~~~~~r~~iv~~L~~vs~~s~~LL~~ak~~~~dp~~pn~~~~L~sAaR~VtesIN~Lv~~ct 155 (158)
T 2l10_A 77 QDFSTFLEAGVEMAGQAPSQEDRAQVVSNLKGISMSSSKLLLAAKALSTDPASPNLKSQLAAAARAVTDSINQLITMCT 155 (158)
T ss_dssp HHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHcCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777777776655431 3334455668899999999998776432 34433 4467788899999999999998754
No 31
>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...
Probab=93.35 E-value=5.7 Score=37.80 Aligned_cols=167 Identities=14% Similarity=0.148 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCC-chhHhHHHHHhHHHHHHHHHHHHHhc-ccccc-chHHHHHHHHHHHHHHHHHHHHH
Q psy9625 92 AKAVAMSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASR-VKAER-NSVHLAALSQASRDVTNATGSVV 168 (394)
Q Consensus 92 akaVa~a~~~Lve~Ad~lv~g~d-~~~~E~li~AAk~VaAATaqLvaasr-vKa~~-~s~~~~~L~~Aa~aVt~A~~~LV 168 (394)
+.+|..++..|++.++.++...+ ...-++...|...|..+...|..+++ -+.+| .+.....|-.|++.+=.++..|+
T Consensus 44 ~~aV~~Av~nfv~vG~~ia~~~ed~~lk~eM~~A~~~v~~ag~~l~~aa~~~~~dP~s~~~R~~lV~aAR~lLs~vtrlL 123 (258)
T 3rf3_A 44 VAAVQAAVSNLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLL 123 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence 46667777777777777764322 22333333366667666666666652 22333 33555556556666655555555
Q ss_pred HHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHH
Q psy9625 169 ATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAAS 248 (394)
Q Consensus 169 ~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAs 248 (394)
-.+=.+- ++.|+ -+++.|... ...+.. - .++++|....+.+...
T Consensus 124 llaD~~d-Vr~il-------------------------~~~~~v~~~-------l~~l~~-~--~~~~el~~~~~~f~~~ 167 (258)
T 3rf3_A 124 LTFDEAE-VRKII-------------------------RVCKGILEY-------LTVAEV-V--ETMEDLVTYTKNLGPG 167 (258)
T ss_dssp HHHHHHH-HHHHH-------------------------HHHHHHHHH-------HTTGGG-C--CSHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHHH-------------------------HHHHHHHHH-------HHHHHh-C--CCHHHHHHHHHHHHHH
Confidence 5443332 22222 222333222 222222 3 5899999999999999
Q ss_pred HHHHHHHHhhcc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 249 TAQLVVASRVKA--ERNSVHLAALSQASRDVTNATGSVVATAKTCIHL 294 (394)
Q Consensus 249 TAQLv~AsrVKa--~~~S~~~~~L~~Ask~V~~At~~LV~avk~~~~~ 294 (394)
...|.....-.. -.+....+.|..|-..+++.+--|.-+.|.+..-
T Consensus 168 ~~~L~~~~~~Rq~eL~~~~~r~~l~~Ar~~Lk~~~p~L~ta~k~~lrh 215 (258)
T 3rf3_A 168 MTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTT 215 (258)
T ss_dssp HHHHHHHHHHHHTTBSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999977664443 3455667889999899999999999999888754
No 32
>3vf0_A Vinculin, metavinculin; cytoskeletal F-actin binding protein, CEL adhesion-protein binding complex; HET: EPE; 2.54A {Homo sapiens}
Probab=93.31 E-value=0.67 Score=44.98 Aligned_cols=70 Identities=20% Similarity=0.236 Sum_probs=56.8
Q ss_pred cchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hhHHHHHhhhhHHHHHHHHHHHhhccC
Q psy9625 192 REFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAK-LERLIVASHGVAASTAQLVVASRVKAE 261 (394)
Q Consensus 192 ~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~-~E~LIvaa~eVAAsTAQLv~AsrVKa~ 261 (394)
..|.+..+.=+.+||.+||.+|+..+.|...+..+-..-.+.. -++|+..++.|.--+-||=+-|+||+.
T Consensus 151 s~ftRGg~kTt~DLI~~AK~IAe~g~~l~k~ar~iA~qCtD~r~K~~LL~~lerIpti~~QLkIls~VKA~ 221 (283)
T 3vf0_A 151 SRLVRGGSGTKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKAT 221 (283)
T ss_dssp HHHTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHhhhhhHHHHHHHHHHhccc
Confidence 3455444456799999999999999999988888766532122 478999999999999999999999996
No 33
>4f7g_B Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus} PDB: 2kbb_A 2kgx_A
Probab=93.29 E-value=2 Score=40.16 Aligned_cols=137 Identities=14% Similarity=0.077 Sum_probs=94.9
Q ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHH
Q psy9625 133 AQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAV 212 (394)
Q Consensus 133 aqLvaasrvKa~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~V 212 (394)
+.|+.+.|-|++-...++..|+ .|.+.+..|=.+.-.+.. |.... +..+. .....+-++..++.+
T Consensus 14 ~~lisaird~APGQ~eCd~AI~----~in~~i~dLd~AsLaA~s---------~~L~~-~~~~s-~~~~qeq~~~~~~eL 78 (216)
T 4f7g_B 14 GTENLYFQSKAPGQLECETAIA----ALNSCLRDLDQASLAAVS---------QQLAP-REGIS-QEALHTQMLTAVQEI 78 (216)
T ss_dssp ----------CTTHHHHHHHHH----HHHHHHHHHHHHHHHHHT---------TCCCC-CCSSC-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCChHHHHHHHH----HHHHHHHHHHHHHHHHHH---------cCCCC-CCCcc-HHHHHHHHHHHHHHH
Confidence 3566666777766555555554 677777777776665551 23221 12211 345677788888888
Q ss_pred HHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhhcc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 213 AMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKA--ERNSVHLAALSQASRDVTNATGSVVATAKT 290 (394)
Q Consensus 213 a~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa--~~~S~~~~~L~~Ask~V~~At~~LV~avk~ 290 (394)
.....-|..+|.+ .+|.|=-++++++..---||.+++.=+ ..+++.|..|-..+|.|..++-.||-++|.
T Consensus 79 ~~~i~~l~~AAk~--------~~e~LG~av~~~a~~~epLv~aa~gaAS~t~ds~~Q~~lLdq~Ktv~es~lqlv~AaK~ 150 (216)
T 4f7g_B 79 SHLIEPLASAARA--------EASQLGHKVSQMAQYFEPLTLAAVGAASKTLSHPQQMALLDQTKTLAESALQLLYTAKE 150 (216)
T ss_dssp HHHHHHHHHHHHH--------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHhhhc--------CHHHHhHHHHHHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888887764 899999999999999999998886655 378888999999999999999999999988
Q ss_pred HH
Q psy9625 291 CI 292 (394)
Q Consensus 291 ~~ 292 (394)
+.
T Consensus 151 ag 152 (216)
T 4f7g_B 151 AG 152 (216)
T ss_dssp HC
T ss_pred cC
Confidence 64
No 34
>1qkr_A Vinculin, tail domain; actin cytoskeleton, cell adhesion, helical bundle, lipid binding; 1.8A {Gallus gallus} SCOP: a.24.9.1 PDB: 3h2u_A 3h2v_A 1rke_B 3myi_A
Probab=92.23 E-value=0.96 Score=41.53 Aligned_cols=72 Identities=19% Similarity=0.203 Sum_probs=59.7
Q ss_pred ccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCchhHHHHHhhhhHHHHHHHHHHHhhccCC
Q psy9625 191 TREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGG-EGAKLERLIVASHGVAASTAQLVVASRVKAER 262 (394)
Q Consensus 191 t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~-~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~~ 262 (394)
...|....+.=+.+||.+||.++...+.|...+..+-..- ....-++|+..+..|.--+-||=+-|+||++-
T Consensus 55 M~~ftrG~g~t~~dlI~~Ak~iAe~~~~l~k~ar~iA~qc~D~~~k~~Ll~~~~rI~t~~~QLkIls~VKA~~ 127 (188)
T 1qkr_A 55 MSRLVRGGSGNKRALIQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATM 127 (188)
T ss_dssp HHHHTTSCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHhhhHHHHHHHHHHHhcccc
Confidence 3567776668889999999999999999998887776552 11356789999999999999999999999974
No 35
>2l7n_A Talin-1; integrin, bundle, focal adhesion, structural protein; NMR {Mus musculus}
Probab=90.40 E-value=1.3 Score=39.91 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhH-hHHHHHhHHHHHHHHHHHHHhc--cccccchHHHHHHHHHHHHHHHHHHHH
Q psy9625 91 AAKAVAMSAKYLLTAADQVVSGGEGAKL-ERLIVASHGVAASTAQLVVASR--VKAERNSVHLAALSQASRDVTNATGSV 167 (394)
Q Consensus 91 AakaVa~a~~~Lve~Ad~lv~g~d~~~~-E~li~AAk~VaAATaqLvaasr--vKa~~~s~~~~~L~~Aa~aVt~A~~~L 167 (394)
++++++.++..|..++.+++....+... -.+|.+++.|--..++|+...| +..+.+..++.+|.+++++|..+...+
T Consensus 81 aar~~A~aL~~lt~avrgvaatt~d~~~q~~ll~~a~~V~~~s~~Li~ear~~~~~p~d~~~~~~L~~~ak~vs~aL~~~ 160 (168)
T 2l7n_A 81 AARDVAGGLRSLAQAARGVAALTSDPAVQAIVLDTASDVLDKASSLIEEAKKASGHPGDPESQQRLAQVAKAVTQALNRC 160 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTBSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 5599999999999999999777532222 3578899999999999998875 223335677889999999999998777
Q ss_pred HH
Q psy9625 168 VA 169 (394)
Q Consensus 168 V~ 169 (394)
|.
T Consensus 161 v~ 162 (168)
T 2l7n_A 161 VS 162 (168)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 36
>3rf3_A Vinculin, metavinculin; alpha-helix bundle domain, cytoskeletal protein, protein-Pro interactions, cell adhesion, cytoskeleton; 1.61A {Homo sapiens} PDB: 4dj9_A 1rke_A 1rkc_A 1syq_A 1ydi_A 2gww_A 2hsq_A 2ibf_A 3tj6_A 2gdc_A 4e17_A 4e18_A 3tj5_A 1u6h_A 1xwj_A 1zvz_A 1zw2_A 1zw3_A 3s90_A 4ehp_A ...
Probab=88.98 E-value=16 Score=34.68 Aligned_cols=198 Identities=15% Similarity=0.139 Sum_probs=118.2
Q ss_pred hHHHHHHHHHHHHHHHHHhcCC-Cc-hhhhhHHHHHHhhhhHHHHHHHHHHccCCCCcchhhhhhchhhHHHHHHHHHHH
Q psy9625 18 EKILDSCTTLMKAIRILVQKSP-DD-LDIASLSLHQARRLEMEAQAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAV 95 (394)
Q Consensus 18 e~iL~aa~~i~~a~~~Lv~~a~-~~-~~~~~~~~~~~~~~~~eaQ~eLV~~gr~s~~~~~~Fy~~~~swteGLISAakaV 95 (394)
|+||+ .|+..++.||.... .+ ...+..+++.-...+..+-..+|..|...+. -..++-..+.+..|...|
T Consensus 10 E~iL~---Pl~~qVttLV~~~e~~~~~g~~~~~~~~~~~aV~~Av~nfv~vG~~ia~-----~~ed~~lk~eM~~A~~~v 81 (258)
T 3rf3_A 10 ESILE---PVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKETVQ-----TTEDQILKRDMPPAFIKV 81 (258)
T ss_dssp HHHHT---THHHHHHHHHHHTSSSCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-----HCCCHHHHHHHHHHHHHH
T ss_pred HHHHH---HHHHHHHHHHhccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHh-----cccCHHHHHHHHHHHHHH
Confidence 45554 57888888988531 11 1222245677777777888888888854321 123344458899999999
Q ss_pred HHHHHHHHHHHHHhhcCCC-chhHhHHHHHhHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy9625 96 AMSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATGSVVATAKTC 174 (394)
Q Consensus 96 a~a~~~Lve~Ad~lv~g~d-~~~~E~li~AAk~VaAATaqLvaasrvKa~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~a 174 (394)
..+.+.|..++..+..... ...-..++.+|+.+=.+|.+|+.+. |.. -++.||..++.+
T Consensus 82 ~~ag~~l~~aa~~~~~dP~s~~~R~~lV~aAR~lLs~vtrlLlla----D~~----------------dVr~il~~~~~v 141 (258)
T 3rf3_A 82 ENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTSDLLLTF----DEA----------------EVRKIIRVCKGI 141 (258)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH----HHH----------------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCChhhHHHHHHHHHHHHHHHHHHHHHH----HHH----------------HHHHHHHHHHHH
Confidence 9999999999999865422 3334446669999999999988772 111 133444444433
Q ss_pred hHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCC-CCchhHHHHHhhhhHHHHHHHH
Q psy9625 175 IHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGE-GAKLERLIVASHGVAASTAQLV 253 (394)
Q Consensus 175 q~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~-~~~~E~LIvaa~eVAAsTAQLv 253 (394)
.+..+.+ +.- +. .+.|..+.|..+.....|...+..=.++=. ...-++|..|-..+--++.-|.
T Consensus 142 ~~~l~~l---~~~-----------~~-~~el~~~~~~f~~~~~~L~~~~~~Rq~eL~~~~~r~~l~~Ar~~Lk~~~p~L~ 206 (258)
T 3rf3_A 142 LEYLTVA---EVV-----------ET-MEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELLPVLI 206 (258)
T ss_dssp HHHHTTG---GGC-----------CS-HHHHHHHHHHHHHHHHHHHHHHHHHHTTBSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HhC-----------CC-HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3211111 010 01 122555555555555555544443333210 1244677887788888888888
Q ss_pred HHHhh
Q psy9625 254 VASRV 258 (394)
Q Consensus 254 ~AsrV 258 (394)
.+|++
T Consensus 207 ta~k~ 211 (258)
T 3rf3_A 207 SAMKI 211 (258)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88855
No 37
>1u6h_B Talin; protein-protein complex, cell adhesion; 2.38A {Gallus gallus}
Probab=88.73 E-value=0.11 Score=34.66 Aligned_cols=22 Identities=32% Similarity=0.389 Sum_probs=11.9
Q ss_pred hhHHHHHhhhhHHHHHHHHHHH
Q psy9625 235 LERLIVASHGVAASTAQLVVAS 256 (394)
Q Consensus 235 ~E~LIvaa~eVAAsTAQLv~As 256 (394)
-++|+.+++.|+-+|++||-|+
T Consensus 5 q~rLl~aak~vaeata~mVeaa 26 (31)
T 1u6h_B 5 SRKLLSAAKILADATAKMVEAA 26 (31)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555554
No 38
>1zw2_B Talin, metavinculin; complex, protein binding; 2.10A {Gallus gallus}
Probab=86.53 E-value=0.29 Score=31.47 Aligned_cols=22 Identities=27% Similarity=0.422 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q psy9625 153 LSQASRDVTNATGSVVATAKTCI 175 (394)
Q Consensus 153 L~~Aa~aVt~A~~~LV~aA~~aq 175 (394)
|+ |++.|..|+..||+++..+|
T Consensus 2 L~-aak~i~~a~~~Lvk~A~aAq 23 (26)
T 1zw2_B 2 LE-AAKSIAAATSALVKAASAAQ 23 (26)
T ss_dssp HH-HHHHHHHHHHHHHHHTTC--
T ss_pred ch-HHHHHHHHHHHHHHHhhhcc
Confidence 55 89999999999999999998
No 39
>1sj7_A Talin 1; structural protein; 2.50A {Mus musculus} SCOP: a.215.1.1
Probab=80.48 E-value=21 Score=32.34 Aligned_cols=57 Identities=21% Similarity=0.264 Sum_probs=36.3
Q ss_pred chhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHH
Q psy9625 193 EFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLV 253 (394)
Q Consensus 193 ~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv 253 (394)
.++..++.-.+.|+.|||..+.+..-|..+++- ..+.+--.|+.++..|..++.+|+
T Consensus 115 AL~~de~~~g~~Ll~Aar~L~~A~s~lLk~~~p----~~~~~rq~ll~AA~~Vg~as~~lL 171 (174)
T 1sj7_A 115 ALLEDEGGNGRPLLQAAKGLAGAVSELLRSAQP----ASAEPRQNLLQAAGNVGQASGELL 171 (174)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTCT----TCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCCccccHHHHHHHHHHHHHHHHHHhccCC----cccchHHHHHHHHHHHHHHHHHHH
Confidence 455555566667999999998888888764221 111233347777777777666665
No 40
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=73.89 E-value=44 Score=29.00 Aligned_cols=82 Identities=16% Similarity=0.216 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHHHHHHhc--cccccchHHHHHHHHHHHHHHHH
Q psy9625 86 EGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR--VKAERNSVHLAALSQASRDVTNA 163 (394)
Q Consensus 86 eGLISAakaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaqLvaasr--vKa~~~s~~~~~L~~Aa~aVt~A 163 (394)
.-++..+|.++...+.++..+ ...+|++-..|+.|..-=.+|..-++ ...-++..-...|-.+.+.+..+
T Consensus 19 t~m~~~~K~iA~~aqemv~ks--------~~~p~eL~~la~~lt~~Y~~La~~~~~A~~~~~~~~v~~~Ir~~Vq~LG~a 90 (137)
T 2b0h_A 19 TTMVRTAKAIAVTVQEMVTKS--------NTSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHG 90 (137)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT--------TTCSSTHHHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHccc--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhHH
Confidence 556777777777777776542 12345555566666655555444442 22333333344444477777778
Q ss_pred HHHHHHHHHHhh
Q psy9625 164 TGSVVATAKTCI 175 (394)
Q Consensus 164 ~~~LV~aA~~aq 175 (394)
|..||..+..+|
T Consensus 91 c~~lV~~ag~~q 102 (137)
T 2b0h_A 91 CSALVTKAGALQ 102 (137)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc
Confidence 888888777666
No 41
>2b0h_A Talin-1; vinculin, helical bundle, VBS, structural protein; NMR {Mus musculus} SCOP: a.24.9.2
Probab=71.09 E-value=51 Score=28.57 Aligned_cols=87 Identities=15% Similarity=0.144 Sum_probs=64.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchh---HHHHHhhhhHHHHHHHHHHHhh-ccCCC-chhHHHHHHHHHHH
Q psy9625 203 EGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLE---RLIVASHGVAASTAQLVVASRV-KAERN-SVHLAALSQASRDV 277 (394)
Q Consensus 203 eGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E---~LIvaa~eVAAsTAQLv~AsrV-Ka~~~-S~~~~~L~~Ask~V 277 (394)
+-|-..|+.+...-..|+.-+.+.+..- .++| +|..+.+++.-+|+-||-.+.. ..+|. ..++++|..++|.|
T Consensus 44 ~eL~~la~~lt~~Y~~La~~~~~A~~~~--~~~~v~~~Ir~~Vq~LG~ac~~lV~~ag~~q~~p~d~~~q~eL~~~aR~V 121 (137)
T 2b0h_A 44 EELGPLANQLTSDYGRLASQAKPAAVAA--ENEEIGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIECARRV 121 (137)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHHTTC--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHH
Confidence 4577778888888888888888888776 4444 5777788888888888887765 23444 35578888888888
Q ss_pred HHHHHHHHHHHHHH
Q psy9625 278 TNATGSVVATAKTC 291 (394)
Q Consensus 278 ~~At~~LV~avk~~ 291 (394)
.+-...++++.|.+
T Consensus 122 sEkVs~vLAALqaG 135 (137)
T 2b0h_A 122 SEKVSHVLAALQAG 135 (137)
T ss_dssp HHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHhh
Confidence 88888888877654
No 42
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=69.99 E-value=60 Score=28.93 Aligned_cols=82 Identities=16% Similarity=0.223 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHHHHHHhc--cccccchHHHHHHHHHHHHHHHH
Q psy9625 86 EGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR--VKAERNSVHLAALSQASRDVTNA 163 (394)
Q Consensus 86 eGLISAakaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaqLvaasr--vKa~~~s~~~~~L~~Aa~aVt~A 163 (394)
.-++..+|.++...+.++..+- ..+|++-..|+.|..-=.+|..-++ +..-++..-...|-.+.+.+..+
T Consensus 47 t~m~~~~K~iA~~aq~mv~k~~--------~~p~eL~~la~~it~~y~~La~~~~~A~~t~~~~~i~~~Ik~~Vq~LG~s 118 (165)
T 2kvp_A 47 TTMVRTAKAIAVTVQEMVTKSN--------TSPEELGPLANQLTSDYGRLASQAKPAAVAAENEEIGAHIKHRVQELGHG 118 (165)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--------HCGGGHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccC--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhHH
Confidence 5566777777777777765521 2345555556566555444433331 12223333333333466777777
Q ss_pred HHHHHHHHHHhh
Q psy9625 164 TGSVVATAKTCI 175 (394)
Q Consensus 164 ~~~LV~aA~~aq 175 (394)
|-.||..+..+|
T Consensus 119 c~~lV~~ag~~q 130 (165)
T 2kvp_A 119 CSALVTKAGALQ 130 (165)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhcc
Confidence 777777776666
No 43
>2kvp_A Talin-1; VBS, vinculin, helical bundle, cytoplasm, cytoskeleto membrane, phosphoprotein, structural protein, acetylation, membrane; NMR {Mus musculus}
Probab=67.59 E-value=68 Score=28.59 Aligned_cols=85 Identities=14% Similarity=0.124 Sum_probs=53.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchh---HHHHHhhhhHHHHHHHHHHHhhcc-CCC-chhHHHHHHHHHHHH
Q psy9625 204 GLISAAKAVAMSAKYLLTAADQVVSGGEGAKLE---RLIVASHGVAASTAQLVVASRVKA-ERN-SVHLAALSQASRDVT 278 (394)
Q Consensus 204 GLISAAk~Va~at~~LveaA~~~v~g~~~~~~E---~LIvaa~eVAAsTAQLv~AsrVKa-~~~-S~~~~~L~~Ask~V~ 278 (394)
-|-..|+.+...-..|+.-+.+.+..- .++| +|..+.+++..+|+-||-.+.... +|. ..++++|-.++|.|.
T Consensus 73 eL~~la~~it~~y~~La~~~~~A~~t~--~~~~i~~~Ik~~Vq~LG~sc~~lV~~ag~~q~~p~d~~~q~eL~~~aR~Vs 150 (165)
T 2kvp_A 73 ELGPLANQLTSDYGRLASQAKPAAVAA--ENEEIGAHIKHRVQELGHGCSALVTKAGALQCSPSDVYTKKELIECARRVS 150 (165)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHS--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHhHHHHHHHHHHhhccCCCccHHHHHHHHHHHHHHH
Confidence 345556666666666666666665554 3333 566677777777777777665422 333 345677777777777
Q ss_pred HHHHHHHHHHHH
Q psy9625 279 NATGSVVATAKT 290 (394)
Q Consensus 279 ~At~~LV~avk~ 290 (394)
+-...++++.|.
T Consensus 151 ekVs~vLaALqa 162 (165)
T 2kvp_A 151 EKVSHVLAALQA 162 (165)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHHh
Confidence 777777776654
No 44
>3gm3_A Protein tyrosine kinase 2 beta; four-helix bundle, transferase; 2.60A {Homo sapiens} SCOP: a.24.14.0 PDB: 3gm1_A 3gm2_A 3u3f_A 3u3c_A 2lk4_A
Probab=64.24 E-value=78 Score=28.08 Aligned_cols=94 Identities=17% Similarity=0.316 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHH
Q psy9625 86 EGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLAALSQASRDVTNATG 165 (394)
Q Consensus 86 eGLISAakaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaqLvaasrvKa~~~s~~~~~L~~Aa~aVt~A~~ 165 (394)
++++...|.|+-.+..|+...|.+++- +.+.....++-+-+.+.+=-.
T Consensus 48 e~Y~~lVK~VGl~LR~Ll~sVd~~~~~--------------------------------lp~s~~~EIema~k~L~kDM~ 95 (153)
T 3gm3_A 48 EGYVVVVKNVGLTLRKLIGSVDDLLPS--------------------------------LPSSSRTEIEGTQKLLNKDLA 95 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGG--------------------------------SCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcc--------------------------------CcHHHHHHHHHHHHHHHHHHH
Confidence 677899999999999999999988654 122222333334444445555
Q ss_pred HHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHh
Q psy9625 166 SVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQV 226 (394)
Q Consensus 166 ~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~ 226 (394)
+||.+-+-+|+ .+.+. -+..+-.++.+||-.+|.-+..|.++-|..
T Consensus 96 eLIs~MkLAqq---------~~~Tt------L~eEyrr~MLsaaH~LA~DaKNLlD~VD~a 141 (153)
T 3gm3_A 96 ELINKMRLAQQ---------NAVTS------LSEECKRQMLTASHTLAVDAKNLLDAVDQA 141 (153)
T ss_dssp HHHHHHHHHHH---------TTTST------THHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH---------hcCcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666665551 22221 233344689999999999999999887764
No 45
>4igg_A Catenin alpha-1; asymmetric dimer, adherens junctions, F-actin binding, cell; 3.66A {Homo sapiens}
Probab=63.43 E-value=1.8e+02 Score=32.01 Aligned_cols=101 Identities=23% Similarity=0.246 Sum_probs=72.8
Q ss_pred ccchhcccc--chhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCc-hhHHHHHhhhhHHHHHHHHHHHhhccCCCc-h-
Q psy9625 191 TREFYKRNH--QWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAK-LERLIVASHGVAASTAQLVVASRVKAERNS-V- 265 (394)
Q Consensus 191 t~~fy~k~~--~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~-~E~LIvaa~eVAAsTAQLv~AsrVKa~~~S-~- 265 (394)
...|++..+ .=+++||.+||.++.+.+.|...+..+-..-.+.. -..|+.....|.-.+-||=+-|+||+.-.. .
T Consensus 645 m~~~~rg~g~lk~~~dli~~Ak~ia~~~~~~~~~~~~~a~~c~d~~~k~~ll~~~~~i~~~~~QL~i~~~vka~~~~~~~ 724 (832)
T 4igg_A 645 MTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGG 724 (832)
T ss_dssp HHHHTTTCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHSTTTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSSSCC
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhhhHHHHHHHHHHhccccccCCCc
Confidence 567887776 57899999999999999999998888776642222 377889999999999999999999986321 1
Q ss_pred --hHH------HHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 266 --HLA------ALSQASRDVTNATGSVVATAKTC 291 (394)
Q Consensus 266 --~~~------~L~~Ask~V~~At~~LV~avk~~ 291 (394)
+.. -|=++.+..-.+...+|+++..+
T Consensus 725 ~~~~s~~d~~~~li~~aknlm~~v~~~v~~~~~a 758 (832)
T 4igg_A 725 ELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVA 758 (832)
T ss_dssp SSCEEHHHHHHHHHHHHHHHHHHHHHHHHTTSHH
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112 34455555555555555555443
No 46
>1z23_A CRK-associated substrate; four-helix bundle, cell adhesion; NMR {Rattus norvegicus}
Probab=58.36 E-value=1e+02 Score=27.53 Aligned_cols=136 Identities=16% Similarity=0.140 Sum_probs=91.9
Q ss_pred chhHhHHHHHhHHHHHHHHHHHHHh---------ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc
Q psy9625 115 GAKLERLIVASHGVAASTAQLVVAS---------RVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHH 185 (394)
Q Consensus 115 ~~~~E~li~AAk~VaAATaqLvaas---------rvKa~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~ 185 (394)
+...|++..--++|+.+..+|.... |..+..++.+-..|..|...|..+.+.++.-|+.+.
T Consensus 10 d~A~E~L~rLQ~~v~~sVs~Ll~fv~s~~~~~~WR~~~~~le~~i~~i~~a~~~v~~Sl~efL~Farga~---------- 79 (163)
T 1z23_A 10 EVAVETLARLQQGVSTTVAHLLDLVGSASGPGGWRSTSEPQEPPVQDLKAAVAAVHGAVHELLEFARSAV---------- 79 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSSCCSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCcCccCcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 3445666666678888888888774 333366888999999999999999999999988776
Q ss_pred CCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhhccCCCch
Q psy9625 186 GSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSV 265 (394)
Q Consensus 186 gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~~~S~ 265 (394)
| .+.+-.|..--.-|---.+.+-.+.+.|+++...+-..+ -|......
T Consensus 80 ~-----nA~~~~d~~L~~kl~r~Lq~l~ds~qiL~~~~~~Ld~~~---------------------------~~~~~~~D 127 (163)
T 1z23_A 80 S-----SATHTSDRTLHAKLSRQLQKMEDVYQTLVVHGQVLDSGR---------------------------GGPGFTLD 127 (163)
T ss_dssp T-----TCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS---------------------------SSCCCCHH
T ss_pred h-----hccccccchHHHHHHHHHHHHhhHHHHHHHHHHHHHccC---------------------------CCCCCCcc
Confidence 2 233344444445555666777888888888876653322 13333445
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 266 HLAALSQASRDVTNATGSVVATAKTCI 292 (394)
Q Consensus 266 ~~~~L~~Ask~V~~At~~LV~avk~~~ 292 (394)
.++++=.+++.|.+=++.|+..+....
T Consensus 128 dLDrfVmvaR~vpdD~kqlas~I~~na 154 (163)
T 1z23_A 128 DLDRLVACSRAVPEDAKQLASFLHGNA 154 (163)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHhhccCCHHHHHHHHHHHhhh
Confidence 566666777777766666666655443
No 47
>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A
Probab=53.63 E-value=1.3e+02 Score=27.44 Aligned_cols=164 Identities=13% Similarity=0.178 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCchhHhHHHHHhHHHHHHHHHHHHHhc-cccccch-HHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 93 KAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASR-VKAERNS-VHLAALSQASRDVTNATGSVVAT 170 (394)
Q Consensus 93 kaVa~a~~~Lve~Ad~lv~g~d~~~~E~li~AAk~VaAATaqLvaasr-vKa~~~s-~~~~~L~~Aa~aVt~A~~~LV~a 170 (394)
.+|..++.+|++..+.++... .++-++...|...|..+-.-|..+++ -+.+|.| .....|-.|++.+=.++..|.-.
T Consensus 7 ~aV~~Av~nfv~vG~~ia~e~-~~lk~dM~~A~~~v~~ag~~l~~a~~~~~~dP~s~~~R~~lV~aaR~lLs~vtrlLll 85 (205)
T 1dow_A 7 ASVEQATENFLEKGDKIAKES-QFLKEELVVAVEDVRKQGDLMKSAAGEFADDPCSSVKRGNMVRAARALLSAVTRLLIL 85 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCChhhHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777765541 22333333366666666666655552 3334433 44445555666555555555544
Q ss_pred HHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHH
Q psy9625 171 AKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTA 250 (394)
Q Consensus 171 A~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTA 250 (394)
+=.+. ++.|+ .+.+.+.+.-..+..= .++++|+..-++......
T Consensus 86 aD~~~-Vrkil--------------------------------~~~~~v~~~L~~le~~---~s~~el~~~f~~f~~~m~ 129 (205)
T 1dow_A 86 ADMAD-VYKLL--------------------------------VQLKVVEDGILKLRNA---GNEQDLGIQYKALKPEVD 129 (205)
T ss_dssp HHHHH-HHHHH--------------------------------HHHHHHHHHHHHHHTC---SSHHHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHH--------------------------------HHHHHHHHHHHHHHhc---CCHHHHHHHHHHHhHHHH
Confidence 43332 12222 3333333333343333 489999999999888777
Q ss_pred HHHHHH--hhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 251 QLVVAS--RVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIH 293 (394)
Q Consensus 251 QLv~As--rVKa~~~S~~~~~L~~Ask~V~~At~~LV~avk~~~~ 293 (394)
.|-... |-+--.+....+.|..|-..+++.+--|..+.|.+..
T Consensus 130 ~l~~l~~~Rq~dLk~~~~rd~l~aAr~~Lk~~sp~L~ta~k~~lr 174 (205)
T 1dow_A 130 KLNIMAAKRQQELKDVGNRDQMAAARGILQKNVPILYTASQACLQ 174 (205)
T ss_dssp HHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhc
Confidence 665443 4443455566789999999999999999999988875
No 48
>3s90_C Talin-1, metavinculin; four-helix bundle, cell adhesion, focal adhesion; 1.97A {Mus musculus}
Probab=51.76 E-value=9.8 Score=26.71 Aligned_cols=21 Identities=33% Similarity=0.403 Sum_probs=16.2
Q ss_pred hHHHHHhhhhHHHHHHHHHHH
Q psy9625 236 ERLIVASHGVAASTAQLVVAS 256 (394)
Q Consensus 236 E~LIvaa~eVAAsTAQLv~As 256 (394)
-+++.+|++||.+|+.||-..
T Consensus 17 ~~Fv~~AkeVa~~Ta~Lv~~i 37 (40)
T 3s90_C 17 RQFVQSAKEVANSTANLVKTI 37 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHH
Confidence 467888888888888886543
No 49
>1dow_A Alpha-catenin; four-helix bundle, cell adhesion; 1.80A {Mus musculus} SCOP: a.24.9.1 PDB: 1dov_A
Probab=51.64 E-value=1.4e+02 Score=27.22 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=29.2
Q ss_pred chhHHHHHhhhhHHHHHHHHHHHhhcc-CCCchhH-HHHHHHHHHHHHHHHHHHHHH
Q psy9625 234 KLERLIVASHGVAASTAQLVVASRVKA-ERNSVHL-AALSQASRDVTNATGSVVATA 288 (394)
Q Consensus 234 ~~E~LIvaa~eVAAsTAQLv~AsrVKa-~~~S~~~-~~L~~Ask~V~~At~~LV~av 288 (394)
.-++|+.|-..+--+|.-|..||++=- +|+.+.- ..=.-.-+.+..|...+.+.+
T Consensus 147 ~rd~l~aAr~~Lk~~sp~L~ta~k~~lrhp~~~~a~~nRd~v~~qm~~al~~I~~v~ 203 (205)
T 1dow_A 147 NRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKANRDLIYKQLQQAVTGISNAA 203 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446777777777777777777774432 3444322 111223344555555554443
No 50
>2jx0_A ARF GTPase-activating protein GIT1; paxillin binding domain homologue, ANK repeat, cytoplasm, GTPase activation, metal-binding; NMR {Rattus norvegicus}
Probab=43.47 E-value=1.6e+02 Score=25.51 Aligned_cols=52 Identities=21% Similarity=0.196 Sum_probs=25.5
Q ss_pred chhHHHHHhhhhHHHHHHHHHHHhhccCCCc--------hhHHHHHHHHHHHHHHHHHHHH
Q psy9625 234 KLERLIVASHGVAASTAQLVVASRVKAERNS--------VHLAALSQASRDVTNATGSVVA 286 (394)
Q Consensus 234 ~~E~LIvaa~eVAAsTAQLv~AsrVKa~~~S--------~~~~~L~~Ask~V~~At~~LV~ 286 (394)
..|.+=.+-+.+..++..|-+=|+ +.-+.. ..+..+..++=.+.+|++.||-
T Consensus 68 ~~etvr~sL~~L~~~a~~Lq~EC~-~~q~~~~~~~~~iq~~tqqVi~cAYdIAkAaK~Lvt 127 (135)
T 2jx0_A 68 ALEPVRSSLRLLNASAYRLQSECR-KTVPPEPGAPVDFQLLTQQVIQCAYDIAKAAKQLVT 127 (135)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHH-SCCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHH-ccCCCcccCcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555555555555555555554 221111 1344555555555555555555
No 51
>3axj_A GM27569P, translin; translin/TRAX heterodimer, passenger RNA cleavage, RNAse, DN protein; 2.10A {Drosophila melanogaster} PDB: 2qva_A 2qrx_A 3riu_A
Probab=43.31 E-value=1.5e+02 Score=27.65 Aligned_cols=84 Identities=13% Similarity=0.173 Sum_probs=52.6
Q ss_pred chhHhHHHHHhHHHHHHHHHHHHHh-ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccc
Q psy9625 115 GAKLERLIVASHGVAASTAQLVVAS-RVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTRE 193 (394)
Q Consensus 115 ~~~~E~li~AAk~VaAATaqLvaas-rvKa~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~ 193 (394)
.+.-|+++..++.|...+.+.+.+. |....+.. -...+..|...+..+. .+++.- .+.+ ...+
T Consensus 35 ~d~REriik~sRdIt~~sk~~I~~Lhr~~~~~~~-~~~~~~eA~~~l~~i~-~~~~~L------~~~l--------~~~~ 98 (249)
T 3axj_A 35 QEVRENIRIVVREIEHLSKEAQIKLQIIHSDLSQ-ISAACGLARKQVELCA-QKYQKL------AELV--------PAGQ 98 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCGGG-HHHHHHHHHHHHHHHH-HHHHHH------HHHS--------CTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc-chHHHHHHHHHHHHHH-HHHHHH------HHHh--------ccCc
Confidence 5667888889999999988887766 55433322 3366666665555533 333221 2222 1468
Q ss_pred hhccccchhhhHHHHHHHHHH
Q psy9625 194 FYKRNHQWTEGLISAAKAVAM 214 (394)
Q Consensus 194 fy~k~~~WteGLISAAk~Va~ 214 (394)
||+-++.|+.||=.-+-++..
T Consensus 99 ~yrY~~~~s~~lQE~VEA~~f 119 (249)
T 3axj_A 99 YYRYSDHWTFITQRLIFIIAL 119 (249)
T ss_dssp HHHHGGGTHHHHHHHHHHHHH
T ss_pred hHHHhhhccHHHHHHHHHHHH
Confidence 999999999998666554443
No 52
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=41.74 E-value=2.4e+02 Score=27.64 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 310 HQARRLEMEAQVRVLELEAGLEKERLKLSALRR 342 (394)
Q Consensus 310 ~~~k~~emE~Qv~ILklE~eLe~aR~kL~~iRk 342 (394)
.+.|++|+|.| |-+|+.+|+.++....++|+
T Consensus 441 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 471 (471)
T 3mq9_A 441 GQKKVEELEGE--ITTLNHKLQDASAEVERLRR 471 (471)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcC
Confidence 44577777775 56788899999988888774
No 53
>3gm3_A Protein tyrosine kinase 2 beta; four-helix bundle, transferase; 2.60A {Homo sapiens} SCOP: a.24.14.0 PDB: 3gm1_A 3gm2_A 3u3f_A 3u3c_A 2lk4_A
Probab=39.37 E-value=2e+02 Score=25.41 Aligned_cols=115 Identities=12% Similarity=0.102 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHH
Q psy9625 159 DVTNATGSVVATAKTCIHLAEIIMAHHGSASNTREFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERL 238 (394)
Q Consensus 159 aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~L 238 (394)
-|=.||-.+|+++.... +++. .--.||.+..+|.|+.+...|+.+-|.++.-=......|+
T Consensus 23 ~VY~at~~VVkaV~~Ls--~~v~-----------------~a~~e~Y~~lVK~VGl~LR~Ll~sVd~~~~~lp~s~~~EI 83 (153)
T 3gm3_A 23 LVYLNVMELVRAVLELK--NELA-----------------QLPPEGYVVVVKNVGLTLRKLIGSVDDLLPSLPSSSRTEI 83 (153)
T ss_dssp HHHHHHHHHHHHHHHHH--HHGG-----------------GCCHHHHHHHHHHHHHHHHHHHHHHHHHGGGSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH--hhhh-----------------hcChHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHH
Confidence 45567777777776655 2221 1125789999999999999999999988876522355666
Q ss_pred HHHhhhhHHHHHHHHHHHhhcc-----CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 239 IVASHGVAASTAQLVVASRVKA-----ERNSVHLAALSQASRDVTNATGSVVATAKTCI 292 (394)
Q Consensus 239 Ivaa~eVAAsTAQLv~AsrVKa-----~~~S~~~~~L~~Ask~V~~At~~LV~avk~~~ 292 (394)
--+=+-+.+.-++|+.+-|-=- ....+..+.+-.|+-.+.--|+||...+-++.
T Consensus 84 ema~k~L~kDM~eLIs~MkLAqq~~~TtL~eEyrr~MLsaaH~LA~DaKNLlD~VD~aR 142 (153)
T 3gm3_A 84 EGTQKLLNKDLAELINKMRLAQQNAVTSLSEECKRQMLTASHTLAVDAKNLLDAVDQAK 142 (153)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677778889999998875311 12234456788888888889999998886654
No 54
>1syq_B Talin 1; cytoskeleton, vinculin, cell adhesion; 2.42A {Homo sapiens}
Probab=33.58 E-value=43 Score=20.92 Aligned_cols=21 Identities=19% Similarity=0.330 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCC
Q psy9625 20 ILDSCTTLMKAIRILVQKSPD 40 (394)
Q Consensus 20 iL~aa~~i~~a~~~Lv~~a~~ 40 (394)
+|.+++.+.-|++.|++.|.+
T Consensus 2 llqaakglagavsellrsaqp 22 (26)
T 1syq_B 2 LLQAAKGLAGAVSELLRSAQP 22 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHTSC
T ss_pred HhHHHhHhHHHHHHHHHhcCc
Confidence 688999999999999999887
No 55
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=33.02 E-value=45 Score=21.03 Aligned_cols=19 Identities=37% Similarity=0.454 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy9625 325 ELEAGLEKERLKLSALRRH 343 (394)
Q Consensus 325 klE~eLe~aR~kL~~iRk~ 343 (394)
+|=+|||.-+.+|..+||.
T Consensus 5 elykeledlqerlrklrkk 23 (27)
T 3twe_A 5 ELYKELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999885
No 56
>1t01_B Talin 1; five helix bundle, cell adhesion, structural protein; 2.06A {Mus musculus}
Probab=29.92 E-value=38 Score=21.21 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHhcCCC
Q psy9625 19 KILDSCTTLMKAIRILVQKSPD 40 (394)
Q Consensus 19 ~iL~aa~~i~~a~~~Lv~~a~~ 40 (394)
.+|.+++.+.-|++.|++.|.+
T Consensus 3 pllqaakglagavsellrsaqp 24 (26)
T 1t01_B 3 PLLQAAKGLAGAVSELLRSAQP 24 (26)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hHHHHHHHhHHHHHHHHHhcCC
Confidence 4789999999999999998876
No 57
>2l81_A Enhancer of filamentation 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative, cell adhesion; NMR {Homo sapiens}
Probab=29.69 E-value=3.1e+02 Score=24.69 Aligned_cols=143 Identities=13% Similarity=0.104 Sum_probs=94.6
Q ss_pred chhHhHHHHHhHHHHHHHHHHHHHhccc---cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCc
Q psy9625 115 GAKLERLIVASHGVAASTAQLVVASRVK---AERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNT 191 (394)
Q Consensus 115 ~~~~E~li~AAk~VaAATaqLvaasrvK---a~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t 191 (394)
+...|++..--++|+.+..+|......+ ...++.+-..|..|...|..+.+.++.-|+.+. .
T Consensus 20 d~A~E~L~rLQ~~v~~sVs~Lm~fvs~~WR~~~~le~~i~~I~~a~~~v~~Sl~efL~FArga~---------------~ 84 (176)
T 2l81_A 20 DTAIERLQRLQQALEMGVSSLMALVTTDWRCYGYMERHINEIRTAVDKVELFLKEYLHFVKGAV---------------A 84 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSSCTTCHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHH---------------H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHH---------------h
Confidence 4456666666778888999988875222 224666777778888889999998888888765 2
Q ss_pred cchhccccchhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchhHHHHHhhhhHHHHHHHHHHHhhccCCCchhHHHHH
Q psy9625 192 REFYKRNHQWTEGLISAAKAVAMSAKYLLTAADQVVSGGEGAKLERLIVASHGVAASTAQLVVASRVKAERNSVHLAALS 271 (394)
Q Consensus 192 ~~fy~k~~~WteGLISAAk~Va~at~~LveaA~~~v~g~~~~~~E~LIvaa~eVAAsTAQLv~AsrVKa~~~S~~~~~L~ 271 (394)
.+.+-.|..--.-|---.+.+-.+-+.|+++...+-..+ -+.+-|.. -|......-++++=
T Consensus 85 nA~~~~d~~L~~kl~rqLq~l~ds~qiL~~~~~~Ld~~~--Wsl~~La~-----------------~~~~~~~DdLDrfV 145 (176)
T 2l81_A 85 NAACLPELILHNKMKRELQRVEDSHQILSQTSHDLNECS--WSLNILAI-----------------NKPQNKCDDLDRFV 145 (176)
T ss_dssp HHTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCHHHHTT-----------------CCSSCTTCHHHHHH
T ss_pred hccccccchHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC--CcHHHHcc-----------------CCCCCCcchHHHHH
Confidence 233344444555566677788888888888877765554 45554432 23333445667777
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy9625 272 QASRDVTNATGSVVATAKTC 291 (394)
Q Consensus 272 ~Ask~V~~At~~LV~avk~~ 291 (394)
.++|.|.+=++.|+..+...
T Consensus 146 mvaR~vPdD~kqlas~I~~N 165 (176)
T 2l81_A 146 MVAKTVPDDAKQLTTTINTN 165 (176)
T ss_dssp HHHTTHHHHHHHHHHHHHHT
T ss_pred HhhccCCHHHHHHHHHHHhc
Confidence 77777777777776665443
No 58
>1zvz_B Talin 1, metavinculin; complex, protein binding; 1.80A {Gallus gallus}
Probab=29.69 E-value=27 Score=22.07 Aligned_cols=19 Identities=26% Similarity=0.288 Sum_probs=9.9
Q ss_pred HHHHhhhhHHHHHHHHHHH
Q psy9625 238 LIVASHGVAASTAQLVVAS 256 (394)
Q Consensus 238 LIvaa~eVAAsTAQLv~As 256 (394)
+|..++.++-+|++||...
T Consensus 3 mv~qak~laqat~~Li~~~ 21 (26)
T 1zvz_B 3 MVRQARILAQATSDLVNAI 21 (26)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3445555555555555444
No 59
>2jx0_A ARF GTPase-activating protein GIT1; paxillin binding domain homologue, ANK repeat, cytoplasm, GTPase activation, metal-binding; NMR {Rattus norvegicus}
Probab=28.65 E-value=2.9e+02 Score=23.95 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=27.7
Q ss_pred CCCcccccchHHHHHHHHHHHHHHHHHhcCCC
Q psy9625 9 DTGVKLEVNEKILDSCTTLMKAIRILVQKSPD 40 (394)
Q Consensus 9 ~~~~~l~v~e~iL~aa~~i~~a~~~Lv~~a~~ 40 (394)
.+|..+...|.+.-....|+.-|..|+.++.+
T Consensus 8 ~~~~~~P~~e~Vvr~TE~ITk~IqeLl~AaQ~ 39 (135)
T 2jx0_A 8 DPDPGLPSTEDVILKTEQVTKNIQELLRAAQE 39 (135)
T ss_dssp SCBSSCSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 45667788899999999999999999999888
No 60
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=27.78 E-value=48 Score=24.24 Aligned_cols=16 Identities=25% Similarity=0.301 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHH
Q psy9625 321 VRVLELEAGLEKERLK 336 (394)
Q Consensus 321 v~ILklE~eLe~aR~k 336 (394)
.+||+||+|.+.-+++
T Consensus 6 EEILRLErEIE~Lqrq 21 (51)
T 2lw9_A 6 EEILRLEKEIEDLQRM 21 (51)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4699999999876543
No 61
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=27.74 E-value=1e+02 Score=25.07 Aligned_cols=41 Identities=27% Similarity=0.218 Sum_probs=29.9
Q ss_pred CccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 300 DDLDIASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRH 343 (394)
Q Consensus 300 ~~~d~s~ls~~~~k~~emE~Qv~ILklE~eLe~aR~kL~~iRk~ 343 (394)
...||+.|.+.+-|... |-+|-+|+++++++...-..|-|+
T Consensus 4 ~~~d~s~LPpeqRkkkL---~~Ki~el~~ei~ke~~~regl~Km 44 (98)
T 2ke4_A 4 MTEDFSHLPPEQQRKRL---QQQLEERSRELQKEVDQREALKKM 44 (98)
T ss_dssp CCSCSSSSCHHHHHHHH---HHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cchhhccCCHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46799999777755554 456889999999887765555555
No 62
>3qb5_K Translin-associated protein X; alpha helical bundle, ribonuclease, hydrolase; 2.95A {Homo sapiens} PDB: 3pja_J
Probab=24.29 E-value=4.6e+02 Score=24.86 Aligned_cols=84 Identities=15% Similarity=0.203 Sum_probs=53.3
Q ss_pred chhHhHHHHHhHHHHHHHHHHHHHh-ccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCccc
Q psy9625 115 GAKLERLIVASHGVAASTAQLVVAS-RVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTRE 193 (394)
Q Consensus 115 ~~~~E~li~AAk~VaAATaqLvaas-rvKa~~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~~ 193 (394)
.+.-|+++..++.|...+.+.+-++ |....+ .....|..|-..+... ..+++.. .+.+. ..+
T Consensus 50 ~d~REriik~sRdIt~~SK~~If~LhR~~~~~--~~~~il~ea~~~L~~i-~~~~~~L------a~~l~--------~~~ 112 (290)
T 3qb5_K 50 HDKYERLVKLSRDITVESKRTIFLLHRITSAP--DMEDILTESEIKLDGV-RQKIFQV------AQELS--------GED 112 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCSST--THHHHHHHHHHHHHHH-HHHHHHH------HHHHS--------SSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--chHHHHHHHHHHHHHH-HHHHHHH------HHHhc--------cCC
Confidence 6778888889999998888877666 543221 2355566555544443 4444332 22221 467
Q ss_pred hhccccchhhhHHHHHHHHHHH
Q psy9625 194 FYKRNHQWTEGLISAAKAVAMS 215 (394)
Q Consensus 194 fy~k~~~WteGLISAAk~Va~a 215 (394)
||+=+..|+-||=.-+-++...
T Consensus 113 ~yry~~~~s~~lQEyVEA~sf~ 134 (290)
T 3qb5_K 113 MHQFHRAITTGLQEYVEAVSFQ 134 (290)
T ss_dssp STTTGGGTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999986666655543
No 63
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=23.83 E-value=3.4e+02 Score=23.14 Aligned_cols=103 Identities=9% Similarity=0.041 Sum_probs=61.1
Q ss_pred CchhHHHHHhhhhHHHHHHHHHH--HhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccchhH
Q psy9625 233 AKLERLIVASHGVAASTAQLVVA--SRVKAERNSVHLAALSQASRDVTNATGSVVATAKTCIHLVDESADDLDIASLSLH 310 (394)
Q Consensus 233 ~~~E~LIvaa~eVAAsTAQLv~A--srVKa~~~S~~~~~L~~Ask~V~~At~~LV~avk~~~~~~~~~~~~~d~s~ls~~ 310 (394)
.+++.|...|.-|-.-..++-.. .+. -+.. ..|-=+-=..|+.|.+.-+.......+ ++-...-..
T Consensus 25 e~ee~L~~vA~~vd~km~ei~~~~~~~~----l~~~----r~aVLaALNiadEl~k~~~~~~~L~~~----l~~~~kE~~ 92 (138)
T 3hnw_A 25 ESEEYLQRVASYINNKITEFNKEESYRR----MSAE----LRTDMMYLNIADDYFKAKKMADSLSLD----IENKDKEIY 92 (138)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTTCHHHHT----SCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHhccCCCC----CCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHH
Confidence 57777777777777666555422 211 1111 111111113456666655544332211 111122366
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy9625 311 QARRLEMEAQVRVLELEAGLEKERLKLSALRRHHLLK 347 (394)
Q Consensus 311 ~~k~~emE~Qv~ILklE~eLe~aR~kL~~iRk~~Y~~ 347 (394)
..|-..++.|+++-.++++++..++++..+.+..-..
T Consensus 93 ~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 93 DLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999999999998875444
No 64
>1j1j_A Translin; testis/brain RNA binding protein, ssDNA binding protein, RNA protein, DNA binding protein; 2.20A {Homo sapiens} SCOP: a.118.16.1 PDB: 3qb5_A 3pja_A 1key_A
Probab=22.28 E-value=4.6e+02 Score=24.13 Aligned_cols=85 Identities=8% Similarity=0.072 Sum_probs=51.7
Q ss_pred chhHhHHHHHhHHHHHHHHHHHHHh-ccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcc
Q psy9625 115 GAKLERLIVASHGVAASTAQLVVAS-RVKAE-RNSVHLAALSQASRDVTNATGSVVATAKTCIHLAEIIMAHHGSASNTR 192 (394)
Q Consensus 115 ~~~~E~li~AAk~VaAATaqLvaas-rvKa~-~~s~~~~~L~~Aa~aVt~A~~~LV~aA~~aq~~~EiV~qg~gs~~~t~ 192 (394)
.+.-|+++..++.|...+.+.+.+. |.... ..+.-...+..|-..+..+ ..+++.- .+.+ ...
T Consensus 30 ~d~REriik~sRdI~~~Sk~~I~~Lhr~~~~~~~~~~~~~~~~A~~~l~~~-~~~~~~L------~~~l--------~~~ 94 (240)
T 1j1j_A 30 QDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTV-KTHLTSL------KTKF--------PAE 94 (240)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGGSSSSSTTHHHHHHHHHHHHHHH-HHHHHHH------HHTS--------CGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHH-HHHHHHH------HHHc--------ccc
Confidence 5667888889999999998888776 54421 1222455566554444443 2333221 1211 146
Q ss_pred chhccccchhhhHHHHHHHHHH
Q psy9625 193 EFYKRNHQWTEGLISAAKAVAM 214 (394)
Q Consensus 193 ~fy~k~~~WteGLISAAk~Va~ 214 (394)
+||+-++.|+-||=.-+-+++.
T Consensus 95 ~~yrY~~~~s~~lQE~VEA~~f 116 (240)
T 1j1j_A 95 QYYRFHEHWRFVLQRLVFLAAF 116 (240)
T ss_dssp GHHHHGGGTHHHHHHHHHHHHH
T ss_pred hHHHHhccccHHHHHHHHHHHH
Confidence 8999999999998666554443
No 65
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=20.62 E-value=1.8e+02 Score=24.59 Aligned_cols=61 Identities=11% Similarity=0.156 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy9625 272 QASRDVTNATGSVVATAKTCIHLVDESADDLDIASLSLHQARRLEMEAQVRVLELEAGLEKERLKLSALRRH 343 (394)
Q Consensus 272 ~Ask~V~~At~~LV~avk~~~~~~~~~~~~~d~s~ls~~~~k~~emE~Qv~ILklE~eLe~aR~kL~~iRk~ 343 (394)
.-...++..+..||..+|.+-...+. =..+|.+ |-++--+|-+||.|++.+.+.|.+..+.
T Consensus 54 ~f~~~~~ela~dli~k~kqIe~LIds-LP~~~~s----------ee~Q~~ri~~L~~E~~~~~~el~~~v~e 114 (132)
T 1ykh_B 54 EFSNTIDELSTDIILKTRQINKLIDS-LPGVDVS----------AEEQLRKIDMLQKKLVEVEDEKIEAIKK 114 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-STTTTCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCCCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667788899999988655432 1233333 2244445677777777777777665554
Done!