BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9631
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49410|EFTU_BOVIN Elongation factor Tu, mitochondrial OS=Bos taurus GN=TUFM PE=1 SV=1
Length = 452
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 39/55 (70%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H VEAQ+Y+LTKEEGGR +P+ ++S TWD+A RII GK++ MPGED
Sbjct: 349 HQKVEAQVYILTKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPGKELAMPGED 403
>sp|P85834|EFTU_RAT Elongation factor Tu, mitochondrial OS=Rattus norvegicus GN=Tufm
PE=1 SV=1
Length = 452
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H VEAQ+Y+L+KEEGGR +P+ ++S TWD+A R+I GK++ MPGED
Sbjct: 349 HQKVEAQVYILSKEEGGRHKPFVSHFMPVMFSLTWDMACRVILPPGKELAMPGED 403
>sp|Q8BFR5|EFTU_MOUSE Elongation factor Tu, mitochondrial OS=Mus musculus GN=Tufm PE=1
SV=1
Length = 452
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 39/55 (70%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H VEAQ+Y+L+KEEGGR +P+ ++S TWD+A R+I GK++ MPGED
Sbjct: 349 HQKVEAQVYILSKEEGGRHKPFVSHFMPVMFSLTWDMACRVILPPGKELAMPGED 403
>sp|P49411|EFTU_HUMAN Elongation factor Tu, mitochondrial OS=Homo sapiens GN=TUFM PE=1
SV=2
Length = 452
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGNPD- 60
H VEAQ+Y+L+KEEGGR +P+ ++S TWD+A RII K++ MPGED +
Sbjct: 349 HQKVEAQVYILSKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPEKELAMPGEDLKFNL 408
Query: 61 PLRGPM 66
LR PM
Sbjct: 409 ILRQPM 414
>sp|A5CCA0|EFTU1_ORITB Elongation factor Tu 1 OS=Orientia tsutsugamushi (strain Boryong)
GN=tuf1 PE=3 SV=1
Length = 394
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGE 55
H EA++Y+LTKEEGGR P+ + Y +T DV I + GK+M MPG+
Sbjct: 302 HCSFEAEVYVLTKEEGGRHTPFFQNYRPQFYCRTTDVTGEIALLSGKEMVMPGD 355
>sp|A5CCL4|EFTU2_ORITB Elongation factor Tu 2 OS=Orientia tsutsugamushi (strain Boryong)
GN=tuf2 PE=3 SV=2
Length = 394
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGE 55
H EA++Y+LTKEEGGR P+ + Y +T DV I + GK+M MPG+
Sbjct: 302 HCSFEAEVYVLTKEEGGRHTPFFQNYRPQFYCRTTDVTGEIALLSGKEMVMPGD 355
>sp|Q661E5|EFTU_BORGA Elongation factor Tu OS=Borrelia garinii (strain PBi) GN=tuf PE=3
SV=1
Length = 394
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ P + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFPGYRPQFFFRTTDVTG-VVALEGKEMVMPGDN 356
>sp|Q0SN31|EFTU_BORAP Elongation factor Tu OS=Borrelia afzelii (strain PKo) GN=tuf PE=3
SV=1
Length = 394
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ P + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFPGYRPQFFFRTTDVTG-VVALEGKEMVMPGDN 356
>sp|B7J241|EFTU_BORBZ Elongation factor Tu OS=Borrelia burgdorferi (strain ZS7) GN=tuf
PE=3 SV=1
Length = 394
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ P + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFPGYRPQFFFRTTDVTG-VVALEGKEMVMPGDN 356
>sp|P50062|EFTU_BORBU Elongation factor Tu OS=Borrelia burgdorferi (strain ATCC 35210 /
B31 / CIP 102532 / DSM 4680) GN=tuf PE=3 SV=1
Length = 394
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ P + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFPGYRPQFFFRTTDVTG-VVALEGKEMVMPGDN 356
>sp|A8GPF2|EFTU_RICAH Elongation factor Tu OS=Rickettsia akari (strain Hartford) GN=tuf
PE=3 SV=1
Length = 395
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDQFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNA 357
>sp|Q92GW4|EFTU_RICCN Elongation factor Tu OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=tuf PE=3 SV=1
Length = 394
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLSADKQMVMPGDNA 357
>sp|A7HM54|EFTU_FERNB Elongation factor Tu OS=Fervidobacterium nodosum (strain ATCC 35602
/ DSM 5306 / Rt17-B1) GN=tuf PE=3 SV=1
Length = 400
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-GGKDMFMPGED 56
H +A IY+L KEEGGR P+T + Y +T DV I+D+ G +M MPG++
Sbjct: 307 HKKFKANIYVLKKEEGGRHTPFTKGYKPQFYIRTADVTGEIVDLPAGVEMVMPGDN 362
>sp|Q8KTA6|EFTU_RICPA Elongation factor Tu OS=Rickettsia parkeri GN=tuf PE=3 SV=1
Length = 394
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNA 357
>sp|Q8KT97|EFTU_RICFE Elongation factor Tu OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=tuf PE=3 SV=1
Length = 394
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNA 357
>sp|Q8KTA1|EFTU_RICMO Elongation factor Tu OS=Rickettsia montana GN=tuf PE=3 SV=1
Length = 394
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNA 357
>sp|P48865|EFTU_RICPR Elongation factor Tu OS=Rickettsia prowazekii (strain Madrid E)
GN=tuf PE=3 SV=2
Length = 394
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPSDKQMVMPGDNA 357
>sp|Q6F0J5|EFTU_MESFL Elongation factor Tu OS=Mesoplasma florum (strain ATCC 33453 / NBRC
100688 / NCTC 11704 / L1) GN=tuf PE=3 SV=1
Length = 394
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H ++A +Y LT EEGGR +P+ + Y +T DV +I G DM MPG++
Sbjct: 303 HTKLQASVYALTTEEGGRQKPFFNKYRPQFYFRTTDVTGEVILPAGTDMVMPGDN 357
>sp|A8GT71|EFTU_RICRS Elongation factor Tu OS=Rickettsia rickettsii (strain Sheila Smith)
GN=tuf PE=3 SV=1
Length = 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNAT 358
>sp|B0BUR2|EFTU_RICRO Elongation factor Tu OS=Rickettsia rickettsii (strain Iowa) GN=tuf
PE=3 SV=1
Length = 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNAT 358
>sp|C4K2I2|EFTU_RICPU Elongation factor Tu OS=Rickettsia peacockii (strain Rustic) GN=tuf
PE=3 SV=1
Length = 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNAT 358
>sp|C3PPA9|EFTU_RICAE Elongation factor Tu OS=Rickettsia africae (strain ESF-5) GN=tuf
PE=3 SV=1
Length = 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNAT 358
>sp|Q8KTA3|EFTU_RICRH Elongation factor Tu OS=Rickettsia rhipicephali GN=tuf PE=3 SV=1
Length = 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNAT 358
>sp|A8EZL8|EFTU_RICCK Elongation factor Tu OS=Rickettsia canadensis (strain McKiel)
GN=tuf PE=3 SV=1
Length = 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNAT 358
>sp|A8F2E9|EFTU_RICM5 Elongation factor Tu OS=Rickettsia massiliae (strain Mtu5) GN=tuf
PE=3 SV=2
Length = 394
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPADKQMVMPGDNAT 358
>sp|Q9TLV8|EFTU_CYACA Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA
PE=3 SV=1
Length = 410
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARII-----DMGGKDMFMPGE 55
HD EA++Y+L KEEGGR P+ P + Y +T DV I D G +M +PG+
Sbjct: 313 HDKFEAEVYVLNKEEGGRHTPFFPGYRPQFYVRTTDVTGNISQFTTDDGGSAEMVLPGD 371
>sp|Q85FT7|EFTU_CYAME Elongation factor Tu, chloroplastic OS=Cyanidioschyzon merolae
GN=tufA PE=3 SV=1
Length = 410
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKD-----MFMPGE 55
H EA++Y+LTKEEGGR P+ P + Y +T DV I D D M MPG+
Sbjct: 313 HTKFEAEVYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGTIEDFTADDGSKAEMVMPGD 371
>sp|Q73IX6|EFTU1_WOLPM Elongation factor Tu 1 OS=Wolbachia pipientis wMel GN=tuf1 PE=3
SV=1
Length = 390
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A++Y+L KEEGGR P+ Q Y +T DV I + GK+M MPG++
Sbjct: 298 HRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLLDGKEMVMPGDN 352
>sp|Q73H85|EFTU2_WOLPM Elongation factor Tu 2 OS=Wolbachia pipientis wMel GN=tuf2 PE=3
SV=1
Length = 390
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A++Y+L KEEGGR P+ Q Y +T DV I + GK+M MPG++
Sbjct: 298 HRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLLDGKEMVMPGDN 352
>sp|Q4A597|EFTU_MYCS5 Elongation factor Tu OS=Mycoplasma synoviae (strain 53) GN=tuf PE=3
SV=1
Length = 394
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
H EA IY+L KEEGGR P+ + Y +T DV + G++M MPGE+ N
Sbjct: 302 HTEFEAAIYVLKKEEGGRHTPFFKNYKPQFYFRTTDVTGGVEFEAGREMVMPGENVN 358
>sp|Q8KT95|EFTU_RICTY Elongation factor Tu OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=tuf PE=3 SV=2
Length = 394
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPFDKQMVMPGDNA 357
>sp|Q5GRY3|EFTU2_WOLTR Elongation factor Tu 2 OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=tuf2 PE=3 SV=1
Length = 390
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A++Y+L KEEGGR P+ Q Y +T DV I + GK+M MPG++
Sbjct: 298 HRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLLEGKEMVMPGDN 352
>sp|Q8KT99|EFTU_RICHE Elongation factor Tu OS=Rickettsia helvetica GN=tuf PE=3 SV=1
Length = 394
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDG 57
HD EA++Y+L+KEEGGR P+T + Y +T DV I K M MPG++
Sbjct: 302 HDKFEAEVYVLSKEEGGRHTPFTNDYRPQFYFRTTDVTGTIKLPFDKQMVMPGDNA 357
>sp|Q9TKZ5|EFTU_NEPOL Elongation factor Tu, chloroplastic OS=Nephroselmis olivacea
GN=tufA PE=3 SV=1
Length = 410
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARI----IDMGGK-DMFMPGE 55
H E+Q+Y+LTKEEGGR P+ P + Y +T DV +I D GG+ M MPG+
Sbjct: 313 HTKFESQVYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIDSFRADDGGEATMVMPGD 371
>sp|Q5GSU2|EFTU1_WOLTR Elongation factor Tu 1 OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=tuf1 PE=3 SV=1
Length = 399
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A++Y+L KEEGGR P+ Q Y +T DV I + GK+M MPG++
Sbjct: 305 HRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLLEGKEMVMPGDN 359
>sp|Q1RHL9|EFTU_RICBR Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf
PE=3 SV=1
Length = 395
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+K+EGGR P+T + Y +T DV I K M MPG++
Sbjct: 303 HDEFEAEVYVLSKDEGGRHTPFTNNYRPQFYFRTTDVTGTIELPADKQMVMPGDNAT 359
>sp|A8GVB2|EFTU_RICB8 Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389)
GN=tuf PE=3 SV=1
Length = 395
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGN 58
HD EA++Y+L+K+EGGR P+T + Y +T DV I K M MPG++
Sbjct: 303 HDEFEAEVYVLSKDEGGRHTPFTNNYRPQFYFRTTDVTGTIELPADKQMVMPGDNAT 359
>sp|B9L7I8|EFTU_NAUPA Elongation factor Tu OS=Nautilia profundicola (strain ATCC BAA-1463
/ DSM 18972 / AmH) GN=tuf PE=3 SV=1
Length = 399
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H EA++Y LTKEEGGR +P+ + Y +T DV +I G +M MPG++
Sbjct: 307 HTKFEAEVYALTKEEGGRHKPFFNGYRPQFYIRTTDVTGSVILPEGVEMVMPGDN 361
>sp|O50340|EFTU_FERIS Elongation factor Tu OS=Fervidobacterium islandicum GN=tuf PE=3
SV=1
Length = 399
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 6 EAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-GGKDMFMPGED 56
+A IY+L KEEGGR P+T + Y +T DV I+D+ G +M MPG++
Sbjct: 310 KANIYVLKKEEGGRHTPFTKGYKPQFYIRTADVTGEIVDLPAGVEMVMPGDN 361
>sp|Q605B0|EFTU_METCA Elongation factor Tu OS=Methylococcus capsulatus (strain ATCC 33009
/ NCIMB 11132 / Bath) GN=tuf1 PE=3 SV=1
Length = 396
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H H EA+IY+L+KEEGGR P+ + Y +T DV + G +M MPG++
Sbjct: 304 HTHFEAEIYVLSKEEGGRHTPFFNGYRPQFYFRTTDVTGAVTLPEGVEMVMPGDN 358
>sp|B5RPI0|EFTU_BORRA Elongation factor Tu OS=Borrelia recurrentis (strain A1) GN=tuf
PE=3 SV=1
Length = 394
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFSGYRPQFFFRTTDVTG-MVSLEGKEMVMPGDN 356
>sp|B5RM34|EFTU_BORDL Elongation factor Tu OS=Borrelia duttonii (strain Ly) GN=tuf PE=3
SV=1
Length = 394
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFSGYRPQFFFRTTDVTG-MVSLEGKEMVMPGDN 356
>sp|P51287|EFTU_PORPU Elongation factor Tu, chloroplastic OS=Porphyra purpurea GN=tufA
PE=3 SV=1
Length = 409
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKD-----MFMPGE 55
H EA++Y+LTKEEGGR P+ P + Y +T DV I D M MPG+
Sbjct: 312 HTQFEAEVYILTKEEGGRHTPFFPGYRPQFYVRTTDVTGTINQFTADDGTDAEMVMPGD 370
>sp|A1QZR2|EFTU_BORT9 Elongation factor Tu OS=Borrelia turicatae (strain 91E135) GN=tuf
PE=3 SV=1
Length = 394
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFSGYRPQFFFRTTDVTG-MVSLEGKEMVMPGDN 356
>sp|B2S0H9|EFTU_BORHD Elongation factor Tu OS=Borrelia hermsii (strain DAH) GN=tuf PE=3
SV=1
Length = 394
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H +A IY LTKEEGGR +P+ + + +T DV ++ + GK+M MPG++
Sbjct: 303 HKKFKASIYCLTKEEGGRHKPFFSGYRPQFFFRTTDVTG-MVSLEGKEMVMPGDN 356
>sp|Q1XDK1|EFTU_PORYE Elongation factor Tu, chloroplastic OS=Porphyra yezoensis GN=tufA
PE=3 SV=1
Length = 409
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKD-----MFMPGE 55
H EA++Y+LTKEEGGR P+ P + Y +T DV I D M MPG+
Sbjct: 312 HTQFEAEVYILTKEEGGRHTPFFPGYRPQFYVRTTDVTGTINQFTADDGTDAEMVMPGD 370
>sp|C5CGR6|EFTU_KOSOT Elongation factor Tu OS=Kosmotoga olearia (strain TBF 19.5.1)
GN=tuf PE=3 SV=1
Length = 399
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-GGKDMFMPGED 56
H +A IY+L KEEGGR P+T + Y +T DV ++D+ G +M MPG++
Sbjct: 306 HKKFKANIYVLKKEEGGRHTPFTKGYRPQFYIRTADVTGELVDLPEGVEMVMPGDN 361
>sp|Q20EU5|EFTU_OLTVI Elongation factor Tu, chloroplastic OS=Oltmannsiellopsis viridis
GN=tufA PE=3 SV=1
Length = 410
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKD-----MFMPGE 55
H EAQ+Y+LTKEEGGR P+ P + Y +T DV +I D M MPG+
Sbjct: 313 HTKFEAQVYVLTKEEGGRHTPFFPGYRPQFYVRTTDVTGKIESFVADDGSASQMVMPGD 371
>sp|P13537|EFTU_THEMA Elongation factor Tu OS=Thermotoga maritima (strain ATCC 43589 /
MSB8 / DSM 3109 / JCM 10099) GN=tuf PE=3 SV=2
Length = 400
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-GGKDMFMPGE 55
H +AQIY+L KEEGGR P+T + Y +T DV I+ + G +M MPG+
Sbjct: 307 HKRFKAQIYVLKKEEGGRHTPFTKGYKPQFYIRTADVTGEIVGLPEGVEMVMPGD 361
>sp|A6Q1L5|EFTU_NITSB Elongation factor Tu OS=Nitratiruptor sp. (strain SB155-2) GN=tuf
PE=3 SV=1
Length = 399
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGED 56
H EA+IY+LTKEEGGR P+ + Y +T DV I G +M MPG++
Sbjct: 307 HTKFEAEIYVLTKEEGGRHTPFFSGYRPQFYVRTTDVTGTITLPEGVEMVMPGDN 361
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,801,465
Number of Sequences: 539616
Number of extensions: 1661237
Number of successful extensions: 3970
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3123
Number of HSP's gapped (non-prelim): 842
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)