Query psy9631
Match_columns 90
No_of_seqs 111 out of 537
Neff 4.3
Searched_HMMs 29240
Date Sat Aug 17 00:41:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2c78_A Elongation factor TU-A; 99.4 1.7E-13 6E-18 105.3 5.5 70 2-72 313-384 (405)
2 1d2e_A Elongation factor TU (E 99.4 2.8E-13 9.6E-18 104.3 6.2 70 2-72 295-366 (397)
3 3avx_A Elongation factor TS, e 99.0 2.4E-10 8.2E-15 102.0 5.9 70 2-72 586-657 (1289)
4 1f60_A Elongation factor EEF1A 98.8 7.3E-09 2.5E-13 81.6 5.9 66 2-72 335-414 (458)
5 2elf_A Protein translation elo 98.7 1.1E-08 3.8E-13 79.0 4.8 66 2-72 280-350 (370)
6 3e1y_E Eukaryotic peptide chai 98.7 2E-08 6.9E-13 72.4 5.7 65 2-71 95-173 (204)
7 1r5b_A Eukaryotic peptide chai 98.6 1.9E-08 6.6E-13 79.4 4.4 65 2-71 362-439 (467)
8 1jny_A EF-1-alpha, elongation 98.6 3E-08 1E-12 77.2 5.4 66 2-72 323-402 (435)
9 3sjy_A Translation initiation 98.6 8.2E-08 2.8E-12 73.8 6.1 62 2-72 314-380 (403)
10 1s0u_A EIF-2-gamma, translatio 98.5 1.2E-07 4.1E-12 73.0 5.8 63 2-73 320-387 (408)
11 1zun_B Sulfate adenylate trans 98.5 1.5E-07 5E-12 73.2 4.7 65 2-72 332-408 (434)
12 1kk1_A EIF2gamma; initiation o 98.4 2.4E-07 8.3E-12 71.2 5.6 63 2-73 322-389 (410)
13 3mca_A HBS1, elongation factor 98.3 3.3E-07 1.1E-11 74.8 3.7 64 2-71 495-565 (592)
14 1wb1_A Translation elongation 98.2 4.2E-07 1.4E-11 72.2 3.1 66 2-71 290-367 (482)
15 3izq_1 HBS1P, elongation facto 97.9 1.3E-05 4.3E-10 65.8 6.0 65 2-71 503-583 (611)
16 3p26_A Elongation factor 1 alp 97.9 2E-05 6.9E-10 62.0 5.9 65 2-71 369-449 (483)
17 3j2k_7 ERF3, eukaryotic polype 97.7 6.6E-05 2.2E-09 58.8 6.5 65 2-71 333-411 (439)
18 2zyl_A Possible oxidoreductase 30.4 9.8 0.00034 29.1 -0.2 57 19-81 9-72 (386)
19 2lv4_A Putative outer membrane 28.4 23 0.0008 24.9 1.5 17 47-63 56-72 (146)
20 3esi_A Uncharacterized protein 25.7 25 0.00084 23.6 1.2 17 48-64 75-92 (129)
21 3q0h_A T cell immunoreceptor w 25.0 44 0.0015 20.2 2.2 26 38-64 3-29 (117)
22 1xe1_A Hypothetical protein PF 24.8 34 0.0012 23.0 1.7 24 38-61 71-98 (116)
23 2oxg_Z SOXZ protein; immunoglo 24.7 22 0.00076 23.1 0.8 35 50-86 13-51 (108)
24 1v8h_A Sulfur oxidation protei 23.4 16 0.00053 23.8 -0.2 34 51-86 13-50 (107)
25 3k3q_A Llama AA1 VHH domain; l 22.5 30 0.001 22.8 1.1 19 46-64 10-29 (151)
26 4he6_A Peptidase family U32; u 21.4 35 0.0012 20.7 1.2 11 32-42 2-12 (89)
No 1
>2c78_A Elongation factor TU-A; hydrolase, GTPase, translation elongation factor, protein synthesis, antibiotic, GTP-binding, nucleotide-binding; HET: GNP PUL; 1.4A {Thermus thermophilus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 2y0u_Z* 2y0w_Z* 2y0y_Z* 2y10_Z* 2y12_Z* 2y14_Z* 2y16_Z* 2y18_Z* 2wrn_Z* 2wrq_Z* 2c77_A* 1aip_A 1exm_A* 1ha3_A* 2xqd_Z* 3fic_Z* 4abr_Z* 1b23_P* 1ob5_A* 1ttt_A* ...
Probab=99.41 E-value=1.7e-13 Score=105.32 Aligned_cols=70 Identities=33% Similarity=0.513 Sum_probs=65.5
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeec-CCceeecCCCCccceE-eeccccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-GGKDMFMPGEDGNPDP-LRGPMRPHHLL 72 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l-~~~~mvMPGD~~~~~v-L~~pm~ie~~l 72 (90)
.++|+|++++|+++||||++|+..||+|+++++|++++|+| .+ ++.++++|||.+.+++ |.+|+++|.+-
T Consensus 313 ~~~f~a~v~~l~~~~~~~~~~~~~g~~~~~~~~t~~~~~~i-~~~~~~~~l~~~~~~~v~~~~~~p~~~~~~~ 384 (405)
T 2c78_A 313 HTKFEASVYVLKKEEGGRHTGFFSGYRPQFYFRTTDVTGVV-QLPPGVEMVMPGDNVTFTVELIKPVALEEGL 384 (405)
T ss_dssp EEEEEEEEEECCGGGTSCSSCBCTTCCCEEEETTEEEEEEE-ECCTTCCCBCTTCEEEEEEEEEEEEEECTTC
T ss_pred eEEEEEEEEEecccCCCccccccCCceEEEEEcccEEEEEE-EEccCccccCCCCEEEEEEEECceEEEccCC
Confidence 46899999999999999999999999999999999999999 68 5567999999999999 99999999873
No 2
>1d2e_A Elongation factor TU (EF-TU); G-protein, beta-barrel, RNA binding protein; HET: GDP; 1.94A {Bos taurus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1xb2_A* 2hcj_A* 2hdn_A*
Probab=99.40 E-value=2.8e-13 Score=104.35 Aligned_cols=70 Identities=47% Similarity=0.739 Sum_probs=65.6
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeec-CCceeecCCCCccceE-eeccccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-GGKDMFMPGEDGNPDP-LRGPMRPHHLL 72 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l-~~~~mvMPGD~~~~~v-L~~pm~ie~~l 72 (90)
.++|+|++++|+++||||++|+..||+|+++++|++++|+| .+ ++.++++|||.+.+++ |.+|++++.+-
T Consensus 295 ~~~f~a~v~~l~~~~~~~~~~~~~g~~~~~~~~t~~~~~~i-~l~~~~~~l~~~~~~~v~~~~~~p~~~~~~~ 366 (397)
T 1d2e_A 295 HQKVEAQVYILTKEEGGRHKPFVSHFMPVMFSLTWDMACRI-ILPPGKELAMPGEDLKLTLILRQPMILEKGQ 366 (397)
T ss_dssp EEEEEEEEEECCGGGTSCSSCBCTTCCCEEEETTEEEEEEE-ECCSSCCCBCTTCEEEEEEEEEEEECCCTTC
T ss_pred ccEEEEEEEEeccccccCccccCCCCEEEEEEecCEEEEEE-EEcCCcccccCCCEEEEEEEECCeEEEccCC
Confidence 57899999999999999999999999999999999999999 67 5568999999999999 99999999873
No 3
>3avx_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase-RNA complex; HET: GH3; 2.41A {Escherichia coli O157} PDB: 3agq_A 3agp_A* 3avu_A 3avv_A 3avt_A* 3avw_A* 3avy_A* 3mmp_A* 3mmp_G* 1efu_B
Probab=99.02 E-value=2.4e-10 Score=101.97 Aligned_cols=70 Identities=33% Similarity=0.576 Sum_probs=65.6
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeec-CCceeecCCCCccceE-eeccccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-GGKDMFMPGEDGNPDP-LRGPMRPHHLL 72 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l-~~~~mvMPGD~~~~~v-L~~pm~ie~~l 72 (90)
.+.|+|+|++|.++|||+++|+..||+|+++++|++++|+| .+ ++.++++|||.+.+++ |.+|++++.+-
T Consensus 586 ~~~F~A~V~~L~~~egg~~~pi~~G~~p~l~igT~~vtg~I-~L~~~~~~L~~Gd~a~V~L~l~~Pi~ve~g~ 657 (1289)
T 3avx_A 586 HTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTI-ELPEGVEMVMPGDNIKMVVTLIHPIAMDDGL 657 (1289)
T ss_dssp EEEEEEEEEECCGGGTSCSSCBCTTCCCEEECSSCEEEEEE-ECCTTCCCBCTTCCCEEEEEEEEEEECCTTC
T ss_pred ceeEEEEEEEEccccccccccccCCCceEEEEeeeeEEEEE-EECCCcccccCCCEEEEEEEECceEEEccCC
Confidence 46899999999999999999999999999999999999999 78 6678999999999999 99999999873
No 4
>1f60_A Elongation factor EEF1A; protein-protein complex, translation; 1.67A {Saccharomyces cerevisiae} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1g7c_A* 1ije_A* 1ijf_A* 2b7b_A* 2b7c_A
Probab=98.78 E-value=7.3e-09 Score=81.63 Aligned_cols=66 Identities=12% Similarity=0.089 Sum_probs=57.2
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC---C----------ceeecCCCCccceE-eecccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG---G----------KDMFMPGEDGNPDP-LRGPMR 67 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~---~----------~~mvMPGD~~~~~v-L~~pm~ 67 (90)
+++|+|+|++|.. .+|+..||++++++.|++++|+|..+. | .++++|||.+.+.+ |.+|++
T Consensus 335 ~~~f~a~v~~l~~-----~~~i~~g~~~~~~~~t~~~~~~i~~l~~~~d~~t~~~~~~~~~~l~~g~~~~v~~~~~~p~~ 409 (458)
T 1f60_A 335 CASFNATVIVLNH-----PGQISAGYSPVLDCHTAHIACRFDELLEKNDRRSGKKLEDHPKFLKSGDAALVKFVPSKPMC 409 (458)
T ss_dssp CSEEEEEEEECSC-----SCCBCTTCCCEEEETTEEEEEEEEEEEEEECTTTCCEEEESCSCBCTTCEEEEEEEESSCCC
T ss_pred eeEEEEEEEEeCC-----CCCCCCCCEEEEEeccceEEEEEEEEEeEecCccccccccCccccCCCCEEEEEEEECCeEE
Confidence 6799999999974 379999999999999999999994441 2 34899999999999 999999
Q ss_pred ccccc
Q psy9631 68 PHHLL 72 (90)
Q Consensus 68 ie~~l 72 (90)
+|.+-
T Consensus 410 ~~~~~ 414 (458)
T 1f60_A 410 VEAFS 414 (458)
T ss_dssp CCCTT
T ss_pred EecCc
Confidence 99874
No 5
>2elf_A Protein translation elongation factor 1A; tRNA, pyrrolysine, structural genomics, NPPSFA; HET: CIT; 1.70A {Methanosarcina mazei}
Probab=98.71 E-value=1.1e-08 Score=79.01 Aligned_cols=66 Identities=9% Similarity=0.001 Sum_probs=57.9
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC-C---ceeecCCCCccceE-eeccccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG-G---KDMFMPGEDGNPDP-LRGPMRPHHLL 72 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~-~---~~mvMPGD~~~~~v-L~~pm~ie~~l 72 (90)
+++|+|++++|.. .+|+..||++++++.|++++|+|..+. | +++.+|||.+.+++ |.+|++++.+-
T Consensus 280 ~~~f~a~v~~l~~-----~~~i~~g~~~~~~~~t~~~~~~v~~l~~d~~~~~~~~~g~~~~v~l~~~~pi~~~~~~ 350 (370)
T 2elf_A 280 TTDYTLECTVSKF-----TKKIEPASVLHLFVGLQSEPVRVEKILVDGNEVEEAKPGSTCVLELSGNKKLAYSKQD 350 (370)
T ss_dssp EEEEEEEEEECTT-----SCCBCTTCEEEEEETTEEEEEEEEEEEETTEEESCBCTTCEEEEEEEEEEEEEECTTS
T ss_pred eEEEEEEEEEECC-----CCCCCCCCEEEEEEcCCEEEEEEEEEEeCCCcceeecCCCEEEEEEEECcEEEEeCCC
Confidence 5789999999976 689999999999999999999994452 3 35889999999999 99999999874
No 6
>3e1y_E Eukaryotic peptide chain release factor GTP-bindi ERF3A; translation termination, peptide release, PTC, P biosynthesis, GTP-binding; HET: ATP; 3.80A {Homo sapiens}
Probab=98.70 E-value=2e-08 Score=72.36 Aligned_cols=65 Identities=12% Similarity=0.022 Sum_probs=56.6
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC---C----------ceeecCCCCccceE-eecccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG---G----------KDMFMPGEDGNPDP-LRGPMR 67 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~---~----------~~mvMPGD~~~~~v-L~~pm~ 67 (90)
.++|+|+|++|.. .+|+..||++++++.|+.++|+|..+. | -+++++||.+.+.+ +.+||+
T Consensus 95 ~~~f~a~v~~l~~-----~~~i~~g~~~~l~~~t~~~~~~i~~i~~~id~~tg~~~~~~~~~l~~gd~a~v~l~~~~pi~ 169 (204)
T 3e1y_E 95 GRTFDAQIVIIEH-----KSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTIC 169 (204)
T ss_dssp CSEEEEEEECCSC-----CSCCCTTEEEEEESSSCEEEEEEEEECCCCCSSTTCCCSSCCSCCCTTCEEEEEEEESSCCC
T ss_pred hEEEEEEEEEeCC-----CCccCCCceEEEEEeCCEEEEEEEEEEEEEcCCCCCEeccCCcCcCCCCEEEEEEEECCeEE
Confidence 5799999999975 458999999999999999999994441 2 15899999999999 999999
Q ss_pred cccc
Q psy9631 68 PHHL 71 (90)
Q Consensus 68 ie~~ 71 (90)
+|.+
T Consensus 170 ~e~~ 173 (204)
T 3e1y_E 170 LETF 173 (204)
T ss_dssp CCCT
T ss_pred EEEc
Confidence 9986
No 7
>1r5b_A Eukaryotic peptide chain release factor GTP-bindi subunit; translation termination, peptide release, GTPase, translatio; 2.35A {Schizosaccharomyces pombe} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1r5n_A* 1r5o_A* 3e20_A
Probab=98.64 E-value=1.9e-08 Score=79.40 Aligned_cols=65 Identities=12% Similarity=-0.045 Sum_probs=56.3
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC---C---------ceeecCCCCccceE-eeccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG---G---------KDMFMPGEDGNPDP-LRGPMRP 68 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~---~---------~~mvMPGD~~~~~v-L~~pm~i 68 (90)
+++|+|+|++|+ +.+|+..||+|+++++|++++|++..+. | .++++|||.+.+.+ |.+|+++
T Consensus 362 ~~~f~a~v~~l~-----~~~~~~~g~~~~~~~~t~~~~~~~~~i~~~~d~~~~~~~~~~~~l~~g~~~~v~l~~~~p~~~ 436 (467)
T 1r5b_A 362 TTRFIAQIAILE-----LPSILTTGYSCVMHIHTAVEEVSFAKLLHKLDKTNRKSKKPPMFATKGMKIIAELETQTPVCM 436 (467)
T ss_dssp EEEEEEEEEECS-----SCCCBSSCCCBEEESSSCCCCBEESSCCCCCCSSCCCCSSCCSBCCTTCBCCEEEEEEEEEEC
T ss_pred ceEEEEEEEEeC-----CCCccCCCCEEEEEEeCCEEEEEEEEEEEEecCCccccccCccccCCCCEEEEEEEECcEEEE
Confidence 578999999997 3678999999999999999999983331 1 24899999999999 9999999
Q ss_pred ccc
Q psy9631 69 HHL 71 (90)
Q Consensus 69 e~~ 71 (90)
|.+
T Consensus 437 ~~~ 439 (467)
T 1r5b_A 437 ERF 439 (467)
T ss_dssp CCT
T ss_pred EEc
Confidence 987
No 8
>1jny_A EF-1-alpha, elongation factor 1-alpha, EF-TU, TUF-1; GTPase, alpha/beta structure, protein biosynthesis, translation; HET: GDP; 1.80A {Sulfolobus solfataricus} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1skq_A* 3agj_A*
Probab=98.64 E-value=3e-08 Score=77.22 Aligned_cols=66 Identities=14% Similarity=0.081 Sum_probs=57.1
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC---C----------ceeecCCCCccceE-eecccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG---G----------KDMFMPGEDGNPDP-LRGPMR 67 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~---~----------~~mvMPGD~~~~~v-L~~pm~ 67 (90)
.++|.|++++|+. .+|+..||++++++.|++++|+|..+. | .++++|||.+.+++ |.+|++
T Consensus 323 ~~~f~a~v~~l~~-----~~~l~~g~~~~~~~~t~~~~~~i~~~~~~~d~~~~~~~~~~~~~l~~g~~~~v~~~~~~p~~ 397 (435)
T 1jny_A 323 ADEFTARIIVVWH-----PTALANGYTPVLHVHTASVACRVSELVSKLDPRTGQEAEKNPQFLKQGDVAIVKFKPIKPLC 397 (435)
T ss_dssp ESEEEEEEEECCC-----SSCBCTTCCCEEEETTEEEEEEEEEEEEEECTTTCSEEEESCSCBCTTCEEEEEEEESSCEE
T ss_pred eEEEEEEEEEECC-----CCcCCCCCEEEEEeCCcEEEEEEEEEeeeeccCcccccccCccccCCCCEEEEEEEECceEE
Confidence 4689999999975 579999999999999999999994441 2 24899999999999 999999
Q ss_pred ccccc
Q psy9631 68 PHHLL 72 (90)
Q Consensus 68 ie~~l 72 (90)
+|.+-
T Consensus 398 ~~~~~ 402 (435)
T 1jny_A 398 VEKYN 402 (435)
T ss_dssp CCCTT
T ss_pred EecCC
Confidence 99764
No 9
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=98.57 E-value=8.2e-08 Score=73.81 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=54.4
Q ss_pred CceeEEEEEEEecccCCc----cCCCCCCCeeeEEEecCCeeEEEeecCCceeecCCCCccceE-eeccccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGR----TRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGNPDP-LRGPMRPHHLL 72 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR----~tPf~~gYrpQff~rT~Dvtg~i~~l~~~~mvMPGD~~~~~v-L~~pm~ie~~l 72 (90)
++.|+|++++|.+.|||| .+|+..||++++++.|++++|+|..+++ | .+++ |.+|++++.|-
T Consensus 314 ~~~~~a~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~gt~~~~~~v~~~~~-------~--~~~~~l~~p~~~~~g~ 380 (403)
T 3sjy_A 314 LWNIRIKYNLLERVVGAKEMLKVDPIRAKETLMLSVGSSTTLGIVTSVKK-------D--EIEVELRRPVAVWSNN 380 (403)
T ss_dssp EEEEEEEEEECSBCTTCSSCCBCCCCCTTCEEEEEETTEEEEEEEEEECS-------S--EEEEEEEEEEECCSSS
T ss_pred eeEEEEEEEEEeccccccccccCCCCCCCCEEEEEECccEEEEEEEEecC-------c--eEEEEeCCcEeeccCC
Confidence 468999999999999999 8999999999999999999999932332 2 5888 99999999885
No 10
>1s0u_A EIF-2-gamma, translation initiation factor 2 gamma subunit; GTPase, EF-1A, tRNA; 2.40A {Methanocaldococcus jannaschii} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=98.52 E-value=1.2e-07 Score=72.98 Aligned_cols=63 Identities=17% Similarity=0.131 Sum_probs=54.4
Q ss_pred CceeEEEEEEEecccCCc----cCCCCCCCeeeEEEecCCeeEEEeecCCceeecCCCCccceE-eecccccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGR----TRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGNPDP-LRGPMRPHHLLL 73 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR----~tPf~~gYrpQff~rT~Dvtg~i~~l~~~~mvMPGD~~~~~v-L~~pm~ie~~l~ 73 (90)
++.|+|++++|...|||| .+|+..||++++++.|++++|+| .. +.+| .+.+ |.+|++++.|-+
T Consensus 320 ~~~~~a~~~~l~~~~g~~~~~~~~~l~~g~~~~~~~~t~~~~~~v-~~------~~~~--~~~~~~~~p~~~~~~~~ 387 (408)
T 1s0u_A 320 REKITIRANLLDRVVGTKEELKIEPLRTGEVLMLNIGTATTAGVI-TS------ARGD--IADIKLKLPICAEIGDR 387 (408)
T ss_dssp EEEEEEEEEECCCCSSCSSTTCCCCCCTTCEEEEEETTEEEEEEE-EE------EETT--EEEEEEEEEEECCTTCE
T ss_pred eEEEEEEEEEEeccccccccccccCCCCCCEEEEEEcCCEEEEEE-EE------ecCC--EEEEEECCcEEecCCCE
Confidence 468999999999999999 69999999999999999999999 32 2334 6788 999999998754
No 11
>1zun_B Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae PV} SCOP: b.43.3.1 b.44.1.1 c.37.1.8
Probab=98.45 E-value=1.5e-07 Score=73.19 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=56.5
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC-----------CceeecCCCCccceE-eecccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG-----------GKDMFMPGEDGNPDP-LRGPMRPH 69 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~-----------~~~mvMPGD~~~~~v-L~~pm~ie 69 (90)
+++|+|++++|.+ +|+..||++++++.|++++|+|..+. ..++++|||.+.+++ |.+|++++
T Consensus 332 ~~~f~a~~~~l~~------~~l~~g~~~~~~~~t~~~~~~v~~~~~~~d~~~~~~~~~~~l~~~d~~~v~~~~~~p~~~~ 405 (434)
T 1zun_B 332 SDAFDAMLVWMAE------EPMLPGKKYDIKRATSYVPGSIASITHRVDVNTLEEGPASSLQLNEIGRVKVSLDAPIALD 405 (434)
T ss_dssp EEEEEEEEEECCS------SCBCTTCCEEEECSSCEEEEEEEEEEEEECTTTCCCCCCSCBCTTCEEEEEEEEEEEEECC
T ss_pred ccEEEEEEEEecc------ccCCCCCEEEEEEcCCEEEEEEEEEeeeeccccccccCccEeCCCCEEEEEEEECCeEEEc
Confidence 4789999999963 49999999999999999999994342 246899999999999 99999999
Q ss_pred ccc
Q psy9631 70 HLL 72 (90)
Q Consensus 70 ~~l 72 (90)
.+-
T Consensus 406 ~~~ 408 (434)
T 1zun_B 406 GYS 408 (434)
T ss_dssp CTT
T ss_pred ccc
Confidence 874
No 12
>1kk1_A EIF2gamma; initiation of translation; HET: GNP; 1.80A {Pyrococcus abyssi} SCOP: b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1kjz_A* 1kk2_A* 1kk3_A* 1kk0_A* 2d74_A 2dcu_A*
Probab=98.44 E-value=2.4e-07 Score=71.18 Aligned_cols=63 Identities=13% Similarity=0.059 Sum_probs=52.2
Q ss_pred CceeEEEEEEEecccCCc----cCCCCCCCeeeEEEecCCeeEEEeecCCceeecCCCCccceE-eecccccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGR----TRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGNPDP-LRGPMRPHHLLL 73 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR----~tPf~~gYrpQff~rT~Dvtg~i~~l~~~~mvMPGD~~~~~v-L~~pm~ie~~l~ 73 (90)
++.|+|++++|...|||| .+|+..||++++++.|++++|+| .. +.+| .+.+ |.+|++++.|-+
T Consensus 322 ~~~~~a~~~~l~~~~g~~~~~~~~~l~~g~~~~~~~~t~~~~~~v-~~------~~~~--~~~l~~~~p~~~~~~~~ 389 (410)
T 1kk1_A 322 WDSLRLEVHLLERVVGTEQELKVEPIKRKEVLLLNVGTARTMGLV-TG------LGKD--EIEVKLQIPVCAEPGDR 389 (410)
T ss_dssp EEEEEEEEEECCCCC--CCCCSCCCCCTTCEEEEEETTEEEEEEE-EE------EETT--EEEEEEEEEEECCTTCE
T ss_pred eEEEEEEEEEEecccccccccccccCCCCCEEEEEEcCCEEeEEE-EE------ecCC--EEEEEeCCcEEecCCCE
Confidence 468999999999999999 69999999999999999999999 33 2234 6788 999999998753
No 13
>3mca_A HBS1, elongation factor 1 alpha-like protein; protein protein complex, translation regulation; 2.74A {Schizosaccharomyces pombe}
Probab=98.30 E-value=3.3e-07 Score=74.84 Aligned_cols=64 Identities=8% Similarity=-0.067 Sum_probs=56.1
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeec-C----CceeecCCCCccceE--eecccccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-G----GKDMFMPGEDGNPDP--LRGPMRPHHL 71 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l-~----~~~mvMPGD~~~~~v--L~~pm~ie~~ 71 (90)
++.|+|++++|. +.+|+..||++++++.|++++|+| .| . +.++++|||.+.+.+ |.+|+++|..
T Consensus 495 ~~~f~a~v~~~~-----~~~pi~~g~~~~l~~~t~~~~~~i-~l~~~~~~~~~~l~~gd~~~v~l~fl~~p~~~e~~ 565 (592)
T 3mca_A 495 VRSFVAEIQTFD-----IHGPILSGSTLVLHLGRTVTSVSL-KIVTVNNKRSRHIASRKRALVRISFLDGLFPLCLA 565 (592)
T ss_dssp ESEEEEEEEECS-----CSSCEETTEEEEEECSSCEEEEEE-EEEESSSSCCSEECSSCEEEEEEEESSSCEEECCT
T ss_pred cCeEEEEEEEEC-----CCccCCCCCEEEEEEcCcEEEEEE-EEEeccccchhccCCCCEEEEEEEECCCcEEEEec
Confidence 468999999997 357999999999999999999999 77 3 467999999999998 7899999654
No 14
>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A*
Probab=98.25 E-value=4.2e-07 Score=72.23 Aligned_cols=66 Identities=15% Similarity=0.063 Sum_probs=57.1
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC-C----------ceeecCCCCccceE-eecccccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG-G----------KDMFMPGEDGNPDP-LRGPMRPH 69 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~-~----------~~mvMPGD~~~~~v-L~~pm~ie 69 (90)
.+.|+|++++|... .+|+..||++++++.|++++|+|..+. . .++++|||.+.+.+ |.+|++++
T Consensus 290 ~~~~~a~v~~l~~~----~~~l~~g~~~~l~~~t~~~~~~v~~~~~~~~d~~~~~~~~~~l~~g~~~~v~l~~~~pv~~~ 365 (482)
T 1wb1_A 290 VDKIVAKIKISDIF----KYNLTPKMKVHLNVGMLIVPAVAVPFKKVTFGKTEENIILNEVISGNEXYXAFELEEKVLAE 365 (482)
T ss_dssp EEEEEECCCCCSSC----CSCCCSSCEEEEEETTEEEEEEEEEEEECCSSSCCCEEECCSSCCSSCCCEEEEEEEEECCC
T ss_pred eeEEEEEEEEeccC----CcccCCCCEEEEEEcccEEEEEEEEEeccccccccccccchhhcCCCEEEEEEEcCccEEec
Confidence 57899999999864 379999999999999999999993334 1 36899999999999 99999999
Q ss_pred cc
Q psy9631 70 HL 71 (90)
Q Consensus 70 ~~ 71 (90)
.+
T Consensus 366 ~~ 367 (482)
T 1wb1_A 366 VG 367 (482)
T ss_dssp SS
T ss_pred CC
Confidence 76
No 15
>3izq_1 HBS1P, elongation factor 1 alpha-like protein; NO-GO mRNA decay, ribosomal protein,hydrolase; 9.50A {Saccharomyces cerevisiae}
Probab=97.94 E-value=1.3e-05 Score=65.84 Aligned_cols=65 Identities=12% Similarity=0.048 Sum_probs=55.3
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeec---CCc---------eeecCCCCccceE-e---ecc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM---GGK---------DMFMPGEDGNPDP-L---RGP 65 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l---~~~---------~mvMPGD~~~~~v-L---~~p 65 (90)
++.|+|+|++|. ..+|+..||++++++.|+.++|+|..+ -|+ +.+.+||.+.+.+ | .+|
T Consensus 503 ~~~f~a~v~~l~-----~~~~l~~g~~~~l~~~t~~~~~~v~~l~~~~d~~t~~~~~~~~~l~~~d~a~v~~~~~~~~~p 577 (611)
T 3izq_1 503 AQCFVLELTTFD-----MNRPLLPGTPFILFIGVKEQPARIKRLISFIDKGNTASKKKIRHLGSKQRAFVEIELIEVKRW 577 (611)
T ss_dssp BSCEEEEEEECS-----CSSCBCTTEEEEEESSSCEEEEEEEEEEESSSSCCCBCTTCSCSSSSCCSEEEEEEESSCSSC
T ss_pred eeEEEEEEEEEC-----CCCCCCCCCEEEEEECCeEeeEEeeeeeeeecccccccccCccccCCCCEEEEEEEECCCCCc
Confidence 578999999996 357999999999999999999999544 122 3799999999999 9 789
Q ss_pred cccccc
Q psy9631 66 MRPHHL 71 (90)
Q Consensus 66 m~ie~~ 71 (90)
|++|..
T Consensus 578 i~~e~~ 583 (611)
T 3izq_1 578 IPLLTA 583 (611)
T ss_dssp BCCCCT
T ss_pred eEEeec
Confidence 999874
No 16
>3p26_A Elongation factor 1 alpha-like protein; GTP/GDP binding domain, beta-barrel, translational GTPase, D structural genomics; 2.50A {Saccharomyces cerevisiae} PDB: 3p27_A*
Probab=97.87 E-value=2e-05 Score=62.03 Aligned_cols=65 Identities=11% Similarity=0.022 Sum_probs=54.7
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeecC---C---------ceeecCCCCccceE-e---ecc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDMG---G---------KDMFMPGEDGNPDP-L---RGP 65 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l~---~---------~~mvMPGD~~~~~v-L---~~p 65 (90)
.+.|+|+|++|.. .+|+..||++.+++.|+.++|+|..+. | -+.+.+||.+.+.+ + .+|
T Consensus 369 ~~~f~a~v~~l~~-----~~~l~~g~~~~l~~~t~~~~~~v~~i~~~~d~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~p 443 (483)
T 3p26_A 369 AQCFVLELTTFDM-----NRPLLPGTPFILFIGVKEQPARIKRLISFIDKGNTASKKKIRHLGSKQRAFVEIELIEVKRW 443 (483)
T ss_dssp CSEEEEEEEECSC-----SSCBCTTCEEEEEETTEEEEEEEEEEEEEEEETTEECCSCCSCBCSSCEEEEEEEECSCSSC
T ss_pred eeEEEEEEEEECC-----CCCCCCCCEEEEEeCceEEEEEEEEEEEEEcCCCcccccCccCcCCCCEEEEEEEECCCCCc
Confidence 5789999999953 569999999999999999999995441 2 13789999999999 9 789
Q ss_pred cccccc
Q psy9631 66 MRPHHL 71 (90)
Q Consensus 66 m~ie~~ 71 (90)
|++|..
T Consensus 444 ~~~~~~ 449 (483)
T 3p26_A 444 IPLLTA 449 (483)
T ss_dssp CEECCT
T ss_pred EEEEec
Confidence 999864
No 17
>3j2k_7 ERF3, eukaryotic polypeptide chain release factor 3; rabbit 80S ribosome, ribosome-translation complex; 17.00A {Oryctolagus cuniculus}
Probab=97.71 E-value=6.6e-05 Score=58.77 Aligned_cols=65 Identities=11% Similarity=0.035 Sum_probs=54.5
Q ss_pred CceeEEEEEEEecccCCccCCCCCCCeeeEEEecCCeeEEEeec-C--C----------ceeecCCCCccceE-eecccc
Q psy9631 2 HDHVEAQIYLLTKEEGGRTRPYTPWGQAHVYSKTWDVAARIIDM-G--G----------KDMFMPGEDGNPDP-LRGPMR 67 (90)
Q Consensus 2 ~~kfeAqvYiLtkEEGGR~tPf~~gYrpQff~rT~Dvtg~i~~l-~--~----------~~mvMPGD~~~~~v-L~~pm~ 67 (90)
++.|+|+|++|.. .+|+..||+|.++++|+.++|+|..+ . | -+.+..||.+.+.+ +.+||+
T Consensus 333 ~~~f~a~v~~l~~-----~~~i~~g~~~~~~~~t~~~~~~i~~i~~~~d~~t~~~~~~~~~~l~~~~~~~v~~~~~~p~~ 407 (439)
T 3j2k_7 333 GRTFDVQIVIIEH-----KSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTIC 407 (439)
T ss_pred eeEEEEEEEEeCC-----CCcCCCCCEEEEEEeceEEEEEEEEEEEeecCCchhhhccCcceecCCcEEEEEEEeCCeEE
Confidence 4689999999974 34799999999999999999988544 1 1 13678899999999 999999
Q ss_pred cccc
Q psy9631 68 PHHL 71 (90)
Q Consensus 68 ie~~ 71 (90)
+|..
T Consensus 408 ~e~~ 411 (439)
T 3j2k_7 408 LETF 411 (439)
T ss_pred Eeec
Confidence 9986
No 18
>2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis}
Probab=30.45 E-value=9.8 Score=29.09 Aligned_cols=57 Identities=12% Similarity=0.233 Sum_probs=31.0
Q ss_pred ccCCCCCCCeeeEEEecCCeeEEEeecCCceeecCCCCccceEeecccccc-------ccccccCCchhH
Q psy9631 19 RTRPYTPWGQAHVYSKTWDVAARIIDMGGKDMFMPGEDGNPDPLRGPMRPH-------HLLLQSCPHKAE 81 (90)
Q Consensus 19 R~tPf~~gYrpQff~rT~Dvtg~i~~l~~~~mvMPGD~~~~~vL~~pm~ie-------~~l~~~~~~~~~ 81 (90)
.-+....+--|..|.|.|=..|... .+-+|+-..+.++..|+.+= .++...|||..-
T Consensus 9 ~~~~~~~~~~~~~f~~~W~~v~~~~------el~~g~~~~~~~~g~~vvl~R~~~G~v~a~~n~CpHrga 72 (386)
T 2zyl_A 9 GVREIDAGALPTRYARGWHCLGVAK------DYLEGKPHGVEAFGTKLVVFADSHGDLKVLDGYCRHMGG 72 (386)
T ss_dssp -----CCCCCCSSCCSEEEEEEEGG------GGCSSSCEEEEETTEEEEEEECTTSCEEEEESBCTTTCC
T ss_pred eeEEccCCCCchhhhcceEEEEEHH------HCCCCCeEEEEECCeEEEEEECCCCCEEEEcCcCCCCCC
Confidence 3334444445667778888777661 22246665555544455442 356678999754
No 19
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=28.37 E-value=23 Score=24.87 Aligned_cols=17 Identities=24% Similarity=0.464 Sum_probs=14.6
Q ss_pred CceeecCCCCccceEee
Q psy9631 47 GKDMFMPGEDGNPDPLR 63 (90)
Q Consensus 47 ~~~mvMPGD~~~~~vL~ 63 (90)
|+..+||||.+.++++.
T Consensus 56 Dk~vL~PGESA~it~Iv 72 (146)
T 2lv4_A 56 DKSVLSPGESATITTIV 72 (146)
T ss_dssp CCCCBCTTCEEEEEEEC
T ss_pred CccccCCCcceEEEEEE
Confidence 78899999999998743
No 20
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=25.71 E-value=25 Score=23.57 Aligned_cols=17 Identities=12% Similarity=0.159 Sum_probs=14.0
Q ss_pred ceeecCCCCccceE-eec
Q psy9631 48 KDMFMPGEDGNPDP-LRG 64 (90)
Q Consensus 48 ~~mvMPGD~~~~~v-L~~ 64 (90)
...|.|||.+++.+ +.+
T Consensus 75 ~~~V~PGD~l~l~v~~~~ 92 (129)
T 3esi_A 75 QQPILPGKTLRLVLIWHA 92 (129)
T ss_dssp CSCCCTTCEEEEEEEEET
T ss_pred CcccCCCCEEEEEEEEEe
Confidence 46899999999998 653
No 21
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=24.95 E-value=44 Score=20.25 Aligned_cols=26 Identities=15% Similarity=0.047 Sum_probs=19.7
Q ss_pred eeEEEeecCCceeecCCCCccceE-eec
Q psy9631 38 VAARIIDMGGKDMFMPGEDGNPDP-LRG 64 (90)
Q Consensus 38 vtg~i~~l~~~~mvMPGD~~~~~v-L~~ 64 (90)
++|+| .-+..-.+.+|+++++.+ +..
T Consensus 3 ~~~~v-~~~~~v~~~~G~~v~L~C~~~~ 29 (117)
T 3q0h_A 3 MTGTI-ETTGNISAEKGGSIILQCHLSS 29 (117)
T ss_dssp SSCEE-EESCCEEEETTCCEEECEEEES
T ss_pred eeEEE-EccCCEEEecCCCEEEEEEecC
Confidence 47777 555556788999999998 665
No 22
>1xe1_A Hypothetical protein PF0907; structural genomics, unknown function, protein structure INI secsg, conserved hypothetical protein; HET: MSE; 2.00A {Pyrococcus furiosus} SCOP: b.43.3.1
Probab=24.80 E-value=34 Score=23.00 Aligned_cols=24 Identities=8% Similarity=0.087 Sum_probs=18.2
Q ss_pred eeEEEeec----CCceeecCCCCccceE
Q psy9631 38 VAARIIDM----GGKDMFMPGEDGNPDP 61 (90)
Q Consensus 38 vtg~i~~l----~~~~mvMPGD~~~~~v 61 (90)
.+|.|+.+ +..+.+.|||+|.+.+
T Consensus 71 ~vg~VkSIE~~~e~v~eA~~GdnVai~I 98 (116)
T 1xe1_A 71 GIGGIVRIERNREKVEFAIAGDRIGISI 98 (116)
T ss_dssp CEEEEEEEEETTEEESEEETTCEEEEEE
T ss_pred eEEEEEEEEECCcCcCCcCCCCEEEEEE
Confidence 56766455 2467999999999888
No 23
>2oxg_Z SOXZ protein; immunoglobulin-like beta-sandwich fold, transport protein; 1.40A {Paracoccus denitrificans} PDB: 2ox5_Z 2oxh_Z*
Probab=24.73 E-value=22 Score=23.08 Aligned_cols=35 Identities=11% Similarity=0.049 Sum_probs=23.1
Q ss_pred eecCCCCccceE-eeccccccccccccCCch---hHHHHHh
Q psy9631 50 MFMPGEDGNPDP-LRGPMRPHHLLLQSCPHK---AEYIEEL 86 (90)
Q Consensus 50 mvMPGD~~~~~v-L~~pm~ie~~l~~~~~~~---~~~~~~~ 86 (90)
-+..||-+++.+ ..+ |||.||++.=-.+ |.||+++
T Consensus 13 ~a~~g~~~~vk~~I~H--PMetGl~~d~~g~~IPa~~I~~v 51 (108)
T 2oxg_Z 13 SAKAGETVTVKALISH--KMESGQRKDADGKLIPRSIINRF 51 (108)
T ss_dssp EECTTEEEEEEEEECC--CCBCSCCBCTTSCBCCCBCEEEE
T ss_pred eecCCCCEEEEEEeEC--CCccccccCcCCCccchHheEEE
Confidence 337899988888 655 5688998763221 5566554
No 24
>1v8h_A Sulfur oxidation protein SOXZ; lithotrophic sulfur oxidation, unknown function, structural genomics; 1.20A {Thermus thermophilus HB8} SCOP: b.1.18.19
Probab=23.43 E-value=16 Score=23.76 Aligned_cols=34 Identities=18% Similarity=0.076 Sum_probs=22.0
Q ss_pred ecCCCCccceE-eeccccccccccccCCch---hHHHHHh
Q psy9631 51 FMPGEDGNPDP-LRGPMRPHHLLLQSCPHK---AEYIEEL 86 (90)
Q Consensus 51 vMPGD~~~~~v-L~~pm~ie~~l~~~~~~~---~~~~~~~ 86 (90)
...||-+++.+ ..+ |||.||++.=-.+ |.||+++
T Consensus 13 ~~~g~~~~vk~~I~H--PmetGl~~D~~g~~iPa~~I~~v 50 (107)
T 1v8h_A 13 PKAGEEFRLQVVAQH--PNEPGTRRDAEGKLIPAKYINLV 50 (107)
T ss_dssp CCTTCEEEEEEEECC--CCBCSCCBCTTSCBCCCBCEEEE
T ss_pred ccCCCcEEEEEEeEC--CCCccccccccCCcCchHheEEE
Confidence 34799888888 655 5688988732111 5666654
No 25
>3k3q_A Llama AA1 VHH domain; llama, VHH, antibody, BONT, cell junction, cell membrane, cytoplasm, disulfide bond, hydrolase; 2.60A {Lama glama} SCOP: b.1.1.0
Probab=22.48 E-value=30 Score=22.82 Aligned_cols=19 Identities=16% Similarity=0.268 Sum_probs=15.4
Q ss_pred CCceeecCCCCccceE-eec
Q psy9631 46 GGKDMFMPGEDGNPDP-LRG 64 (90)
Q Consensus 46 ~~~~mvMPGD~~~~~v-L~~ 64 (90)
++...|.||++|++.+ ...
T Consensus 10 ~~~~~v~~G~~vtL~C~~s~ 29 (151)
T 3k3q_A 10 SGGGTLQAGKSLRLSCAISG 29 (151)
T ss_dssp ECCEEEETTCCEEEEEEEES
T ss_pred cCCEEECCCCCEEEEEEEeC
Confidence 4557889999999998 654
No 26
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=21.42 E-value=35 Score=20.66 Aligned_cols=11 Identities=18% Similarity=0.235 Sum_probs=5.9
Q ss_pred EEecCCeeEEE
Q psy9631 32 YSKTWDVAARI 42 (90)
Q Consensus 32 f~rT~Dvtg~i 42 (90)
|+|+++..|.|
T Consensus 2 y~~~~~fvG~V 12 (89)
T 4he6_A 2 LKTTREFAGLV 12 (89)
T ss_dssp CCSGGGCSEEE
T ss_pred cccccEEEEEE
Confidence 44555555554
Done!