BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9635
(439 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, photoreceptor-specific
OS=Drosophila melanogaster GN=CdsA PE=1 SV=2
Length = 447
Score = 400 bits (1028), Expect = e-110, Method: Compositional matrix adjust.
Identities = 212/445 (47%), Positives = 304/445 (68%), Gaps = 19/445 (4%)
Query: 1 MSELKHRHIDTNAASGDASATPSTEANK--PASSSSSDVDNDDVA------AVDLSKQIK 52
M+E++ R + D + + S ANK A+ SS VD+++ +L+K +
Sbjct: 1 MAEVRRRKGEDEPLE-DTAISGSDAANKRNSAADSSDHVDSEEEKIPEEKFVDELAKNLP 59
Query: 53 QGTNKVPGFIAQYIQS--EAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICVQVIC 110
QGT+K P + ++ + ++N +IR IFT +M+ + +I+ G +A+++ + VQV C
Sbjct: 60 QGTDKTPEILDSALKDLPDRWKNWVIRGIFTWIMICGFALIIYGGPLALMITTLLVQVKC 119
Query: 111 FREIMTIGLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAALSFLV 170
F+EI++IG VY+ + LPW R++++++L T NYF Y ++ + + + L FLV
Sbjct: 120 FQEIISIGYQVYRIHGLPWFRSLSWYFLLTSNYFFYGENLVDYFGVVINR--VEYLKFLV 177
Query: 171 RYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLV 230
Y+ F+SF LY +GF+ FVLSL K Y++QFSLFAWTHVSLLI+VTQ + +IQNI+ GL+
Sbjct: 178 TYHRFLSFALYIIGFVWFVLSLVKKYYIKQFSLFAWTHVSLLIVVTQSYLIIQNIFEGLI 237
Query: 231 WFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTK 290
WFI+PVSMIV ND MAY+ GF+FGRTPLIKLSPKKTWEGFIGG TVL IL ++ L
Sbjct: 238 WFIVPVSMIVCNDVMAYVFGFFFGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYVLCN 297
Query: 291 FDYFVCPVQFTD--GKYSYVCEVGYIYRQQLYTV----FNKEFYTYPILFHTIVISIFAS 344
+ YF+CP+Q+++ G+ + C Y++ Q Y++ K YP ++H+I +S+F+S
Sbjct: 298 YQYFICPIQYSEEQGRMTMSCVPSYLFTPQEYSLKLFGIGKTLNLYPFIWHSISLSLFSS 357
Query: 345 LIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIYRNTIQ 404
+IGPFGGFFASGFKRAF IKDF D+IPGHGG++DRFDCQFLM+TFV VYI +FI +
Sbjct: 358 IIGPFGGFFASGFKRAFKIKDFGDMIPGHGGIMDRFDCQFLMATFVNVYISSFIRTPSPA 417
Query: 405 GLLDNIYMLKPEQQLQLYYNLKQDL 429
LL IY LKP+QQ Q+Y +LK +L
Sbjct: 418 KLLTQIYNLKPDQQYQIYQSLKDNL 442
>sp|Q92903|CDS1_HUMAN Phosphatidate cytidylyltransferase 1 OS=Homo sapiens GN=CDS1 PE=2
SV=2
Length = 461
Score = 388 bits (996), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/463 (43%), Positives = 287/463 (61%), Gaps = 30/463 (6%)
Query: 1 MSELKHR-------------HIDTNAASGDASATPSTEANKPASSSSSDVDNDDVAAVDL 47
M EL+HR H + AA GD +++ D+D+ + +
Sbjct: 1 MLELRHRGSCPGPREAVSPPHREGEAAGGDHETESTSDKETDIDDRYGDLDSRTDSDI-- 58
Query: 48 SKQIKQGTNKVPGFIAQYIQ--SEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIIC 105
+I +++ P + + + S ++N IR I T+ M+ + +I++G +++ ++
Sbjct: 59 -PEIPPSSDRTPEILKKALSGLSSRWKNWWIRGILTLTMISLFFLIIYMGSFMLMLLVLG 117
Query: 106 VQVICFREIMTIGLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAA 165
+QV CF EI+TIG VY Y LPW R +++++L NYF Y V + +++
Sbjct: 118 IQVKCFHEIITIGYRVYHSYDLPWFRTLSWYFLLCVNYFFYGETVADYFATFVQREE--Q 175
Query: 166 LSFLVRYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNI 225
L FL+RY+ FISF LY GF FVLSL K Y QF +FAWTHV+LLI VTQ H +IQN+
Sbjct: 176 LQFLIRYHRFISFALYLAGFCMFVLSLVKKHYRLQFYMFAWTHVTLLITVTQSHLVIQNL 235
Query: 226 YNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLA 285
+ G++WF++P+S ++ ND AYL GF+FGRTPLIKLSPKKTWEGFIGG TV+ + A
Sbjct: 236 FEGMIWFLVPISSVICNDITAYLFGFFFGRTPLIKLSPKKTWEGFIGGFFSTVVFGFIAA 295
Query: 286 FYLTKFDYFVCPVQFTDGKYSYV--CEVGYIYRQQLYT-------VFNKEFYT-YPILFH 335
+ L+K+ YFVCPV++ S+V CE +++ Q Y+ V +E + YP H
Sbjct: 296 YVLSKYQYFVCPVEYRSDVNSFVTECEPSELFQLQTYSLPPFLKAVLRQERVSLYPFQIH 355
Query: 336 TIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIY 395
+I +S FASLIGPFGGFFASGFKRAF IKDF++ IPGHGG++DRFDCQ+LM+TFV+VYI
Sbjct: 356 SIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYIT 415
Query: 396 TFIYRNTIQGLLDNIYMLKPEQQLQLYYNLKQDLIARDILQNT 438
+FI +L + +L+PEQQL +Y LK LI + ILQ T
Sbjct: 416 SFIRGPNPSKVLQQLLVLQPEQQLNIYKTLKTHLIEKGILQPT 458
>sp|O35052|CDS1_RAT Phosphatidate cytidylyltransferase 1 OS=Rattus norvegicus GN=Cds1
PE=1 SV=2
Length = 461
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/463 (43%), Positives = 286/463 (61%), Gaps = 30/463 (6%)
Query: 1 MSELKHRHI-------------DTNAASGDASATPSTEANKPASSSSSDVDNDDVAAVDL 47
M EL+HR + AA GD +++ D+D + V
Sbjct: 1 MLELRHRGGCPGPGGAGTPPPREGEAAGGDHETESTSDKETDIDDRYGDLDARGDSDV-- 58
Query: 48 SKQIKQGTNKVPGFIAQYIQ--SEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIIC 105
++ +++ P + + + S ++N IR I T+ M+ + +I++G +++ ++
Sbjct: 59 -PEVPPSSDRTPEILKKALSGLSSRWKNWWIRGILTLTMISLFFLIIYMGSFMLMLLVLG 117
Query: 106 VQVICFREIMTIGLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAA 165
+QV CF+EI+TIG VY Y LPW R +++++L NYF Y V + +++
Sbjct: 118 IQVKCFQEIITIGYRVYHSYDLPWFRTLSWYFLLCVNYFFYGETVADYFATFVQREE--Q 175
Query: 166 LSFLVRYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNI 225
L FL+RY+ FISF LY GF FVLSL K Y QF +FAWTHV+LLI VTQ H +IQN+
Sbjct: 176 LQFLIRYHRFISFALYLAGFCMFVLSLVKKHYRLQFYMFAWTHVTLLITVTQSHLVIQNL 235
Query: 226 YNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLA 285
+ G++WF++P+S ++ ND AYL GF+FGRTPLIKLSPKKTWEGFIGG TV+ + A
Sbjct: 236 FEGMIWFLVPISSVICNDITAYLFGFFFGRTPLIKLSPKKTWEGFIGGFFSTVIFGFIAA 295
Query: 286 FYLTKFDYFVCPVQFTDGKYSYV--CEVGYIYRQQLYT-------VFNKEFYT-YPILFH 335
+ L+K+ YFVCPV++ S+V CE +++ Q Y+ V ++E + YP H
Sbjct: 296 YVLSKYQYFVCPVEYRSDVNSFVTECEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQIH 355
Query: 336 TIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIY 395
+I +S FASLIGPFGGFFASGFKRAF IKDF++ IPGHGG++DRFDCQ+LM+TFV+VYI
Sbjct: 356 SIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYIT 415
Query: 396 TFIYRNTIQGLLDNIYMLKPEQQLQLYYNLKQDLIARDILQNT 438
+FI +L + +L+PEQQL +Y LK L + ILQ T
Sbjct: 416 SFIRGPNPSKVLQQLLVLQPEQQLNIYRTLKIHLTEKGILQPT 458
>sp|P98191|CDS1_MOUSE Phosphatidate cytidylyltransferase 1 OS=Mus musculus GN=Cds1 PE=2
SV=2
Length = 461
Score = 382 bits (981), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/463 (43%), Positives = 285/463 (61%), Gaps = 30/463 (6%)
Query: 1 MSELKHRHI-------------DTNAASGDASATPSTEANKPASSSSSDVDNDDVAAVDL 47
M EL+HR + AA GD +++ D+D + V
Sbjct: 1 MLELRHRGGCPGPGGAGAPPPREGEAAGGDHETESTSDKETDIDDRYGDLDARGDSDV-- 58
Query: 48 SKQIKQGTNKVPGFIAQYIQ--SEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIIC 105
++ +++ P + + + S ++N IR I T+ M+ + +I++G +++ ++
Sbjct: 59 -PEVPPSSDRTPEILKKALSGLSSRWKNWWIRGILTLTMISLFFLIIYMGSFMLMLLVLG 117
Query: 106 VQVICFREIMTIGLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAA 165
+QV CF EI+TIG VY Y LPW R +++++L NYF Y V + +++
Sbjct: 118 IQVKCFHEIITIGYRVYHSYDLPWFRTLSWYFLLCVNYFFYGETVADYFATFVQREE--Q 175
Query: 166 LSFLVRYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNI 225
L FL+RY+ FISF LY GF FVLSL K Y QF +FAWTHV+LLI VTQ H +IQN+
Sbjct: 176 LQFLIRYHRFISFALYLAGFCMFVLSLVKKHYRLQFYMFAWTHVTLLITVTQSHLVIQNL 235
Query: 226 YNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLA 285
+ G++WF++P+S ++ ND AYL GF+FGRTPLIKLSPKKTWEGFIGG TV+ + A
Sbjct: 236 FEGMIWFLVPISSVICNDITAYLFGFFFGRTPLIKLSPKKTWEGFIGGFFSTVIFGFIAA 295
Query: 286 FYLTKFDYFVCPVQFTDGKYSYV--CEVGYIYRQQLYT-------VFNKEFYT-YPILFH 335
+ L+K+ YFVCPV++ S+V CE +++ Q Y+ V ++E + YP H
Sbjct: 296 YVLSKYQYFVCPVEYRSDVNSFVTECEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQIH 355
Query: 336 TIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIY 395
+I +S FASLIGPFGGFFASGFKRAF IKDF++ IPGHGG++DRFDCQ+LM+TFV+VYI
Sbjct: 356 SIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYIT 415
Query: 396 TFIYRNTIQGLLDNIYMLKPEQQLQLYYNLKQDLIARDILQNT 438
+FI +L + +L+PEQQL +Y LK L + ILQ T
Sbjct: 416 SFIRGPNPSKVLQQLLVLQPEQQLNIYRTLKIHLTEKGILQPT 458
>sp|Q99L43|CDS2_MOUSE Phosphatidate cytidylyltransferase 2 OS=Mus musculus GN=Cds2 PE=1
SV=1
Length = 444
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 277/449 (61%), Gaps = 22/449 (4%)
Query: 1 MSELKHRHIDTNAASGDASATPSTEANKPASSSSSDVDNDDVAAVDLSKQIKQGTNKVPG 60
M+EL+ R + +A D + +EA ++S + A + S + P
Sbjct: 1 MTELRQRVVREDAPPEDKES--ESEAKLDGETASDSESRAETAPLPTS------VDDTPE 52
Query: 61 FIAQYIQ--SEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICVQVICFREIMTIG 118
+ + + S ++N +R I T+ M+ F+ +I+LG + +++ ++CVQ+ CF EI+TIG
Sbjct: 53 VLNRALSNLSSRWKNWWVRGILTLAMIAFFFIIIYLGPMVLMMIVMCVQIKCFHEIITIG 112
Query: 119 LTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAALSFLVRYNTFISF 178
VY Y LPW R +++++L NYF Y V + F +++ L L +Y+ FISF
Sbjct: 113 YNVYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQREE--PLRILSKYHRFISF 170
Query: 179 CLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLVWFILPVSM 238
LY GF FVLSL K Y QF +F WTHV+LLI+VTQ H +I N++ G++WFI+P+S
Sbjct: 171 ALYLTGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISC 230
Query: 239 IVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPV 298
++ ND MAY+ GF+FGRTPLIKLSPKKTWEGFIGG TV+ +LL++ ++ + FVCPV
Sbjct: 231 VICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPV 290
Query: 299 QFTDGKYSYV--CEVGYIYRQQLYTVFN--------KEFYTYPILFHTIVISIFASLIGP 348
++ + S+ CE ++R Q Y + K YP H+I +S FASLIGP
Sbjct: 291 EYNNDTNSFTVDCEPSDLFRLQEYNIPGVIQSAIGWKTVRMYPFQIHSIALSTFASLIGP 350
Query: 349 FGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIYRNTIQGLLD 408
FGGFFASGFKRAF IKDF++ IPGHGG++DRFDCQ+LM+TFV VYI +FI L+
Sbjct: 351 FGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKLIQ 410
Query: 409 NIYMLKPEQQLQLYYNLKQDLIARDILQN 437
L+P+QQL ++ LK L + IL +
Sbjct: 411 QFLTLRPDQQLHIFNTLKSHLTDKGILTS 439
>sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens GN=CDS2 PE=1
SV=1
Length = 445
Score = 376 bits (965), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/452 (42%), Positives = 280/452 (61%), Gaps = 25/452 (5%)
Query: 1 MSELKHR--HIDTNAASGDASATPSTEANKPASSSSSDVDNDD--VAAVDLSKQIKQGTN 56
M+EL+ R H S + + + AS S S ++ V+A D + + + +
Sbjct: 1 MTELRQRVAHEPVAPPEDKESESEAKVDGETASDSESRAESAPLPVSADDTPEVLNRALS 60
Query: 57 KVPGFIAQYIQSEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICVQVICFREIMT 116
+ S ++N +R I T+ M+ F+ +I+LG + +++ ++CVQ+ CF EI+T
Sbjct: 61 NL---------SSRWKNWWVRGILTLAMIAFFFIIIYLGPMVLMIIVMCVQIKCFHEIIT 111
Query: 117 IGLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAALSFLVRYNTFI 176
IG VY Y LPW R +++++L NYF Y V + F +++ L L +Y+ FI
Sbjct: 112 IGYNVYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQR--EEPLRILSKYHRFI 169
Query: 177 SFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLVWFILPV 236
SF LY +GF FVLSL K Y QF +F WTHV+LLI+VTQ H +I N++ G++WFI+P+
Sbjct: 170 SFTLYLIGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPI 229
Query: 237 SMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVC 296
S ++ ND MAY+ GF+FGRTPLIKLSPKKTWEGFIGG TV+ +LL++ ++ + FVC
Sbjct: 230 SCVICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVC 289
Query: 297 PVQFTDGKYSYV--CEVGYIYRQQLYTVFN--------KEFYTYPILFHTIVISIFASLI 346
PV++ + S+ CE ++R Q Y + K YP H+I +S FASLI
Sbjct: 290 PVEYNNDTNSFTVDCEPSDLFRLQEYNIPGVIQSVIGWKTVRMYPFQIHSIALSTFASLI 349
Query: 347 GPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIYRNTIQGL 406
GPFGGFFASGFKRAF IKDF++ IPGHGG++DRFDCQ+LM+TFV VYI +FI L
Sbjct: 350 GPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKL 409
Query: 407 LDNIYMLKPEQQLQLYYNLKQDLIARDILQNT 438
+ L+P+QQL ++ L+ LI + +L +T
Sbjct: 410 IQQFLTLRPDQQLHIFNTLRSHLIDKGMLTST 441
>sp|A0JNC1|CDS2_BOVIN Phosphatidate cytidylyltransferase 2 OS=Bos taurus GN=CDS2 PE=1
SV=1
Length = 445
Score = 375 bits (963), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/447 (42%), Positives = 277/447 (61%), Gaps = 21/447 (4%)
Query: 1 MSELKHRHIDTNAASGDASATPSTEANKPASSSSSDVDNDDVAAVDLSKQIKQGTNKVPG 60
M+EL+ R + + A P + ++ + + + +D + V+ Q + P
Sbjct: 1 MTELRQR------VAREPEAPPEDKESESEAKADGETASDSESRVEAVTQ-PPSADDTPE 53
Query: 61 FIAQYIQ--SEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICVQVICFREIMTIG 118
+ + + S ++N +R I T+ M+ F+ +I+LG + +++ ++CVQ+ CF EI+TIG
Sbjct: 54 VLNRALSNLSSRWKNWWVRGILTLAMIAFFFIIIYLGPMVLMMIVMCVQIKCFHEIITIG 113
Query: 119 LTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAALSFLVRYNTFISF 178
VY Y LPW R +++++L NYF Y V + F +++ L L +Y+ FISF
Sbjct: 114 YNVYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQR--EEPLRILSKYHRFISF 171
Query: 179 CLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLVWFILPVSM 238
LY GF FVLSL K Y QF +F WTHV+LLI+VTQ H +I N++ G++WFI+P+S
Sbjct: 172 TLYLTGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISC 231
Query: 239 IVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPV 298
++ ND MAY+ GF+FGRTPLIKLSPKKTWEGFIGG TV+ +LL++ ++ + FVCPV
Sbjct: 232 VICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPV 291
Query: 299 QFTDGKYSYV--CEVGYIYRQQLYTVFN--------KEFYTYPILFHTIVISIFASLIGP 348
++ + S+ CE ++R Q Y + K YP H+I +S FASLIGP
Sbjct: 292 EYNNDTNSFTVDCEPSGLFRLQEYNIPGVIQSIIGWKTVRMYPFQIHSIALSTFASLIGP 351
Query: 349 FGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIYRNTIQGLLD 408
FGGFFASGFKRAF IKDF++ IPGHGG++DRFDCQ+LM+TFV VYI +FI L+
Sbjct: 352 FGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKLVQ 411
Query: 409 NIYMLKPEQQLQLYYNLKQDLIARDIL 435
L+P+QQL ++ LK L + +L
Sbjct: 412 QFLTLRPDQQLHIFNTLKSHLTDKGML 438
>sp|Q91XU8|CDS2_RAT Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2
PE=2 SV=1
Length = 443
Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/449 (42%), Positives = 275/449 (61%), Gaps = 23/449 (5%)
Query: 1 MSELKHRHIDTNAASGDASATPSTEANKPASSSSSDVDNDDVAAVDLSKQIKQGTNKVPG 60
M+EL+ R + +A D + +EA ++S + A S + P
Sbjct: 1 MTELRQRAVREDAPPEDKES--ESEAKLDGETASDSESRAETAPPPTS------IDDTPE 52
Query: 61 FIAQYIQ--SEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICVQVICFREIMTIG 118
+ + + S ++N +R I T+ M+ F+ +I+LG + +++ ++CVQ+ CF EI+TIG
Sbjct: 53 VLNRALSNLSSRWKNWWVRGILTMAMIAFFFIIIYLGPMVLMMIVMCVQIKCFHEIITIG 112
Query: 119 LTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAALSFLVRYNTFISF 178
VY Y LPW R +++++L NYF Y V + F +++ L L +Y+ FISF
Sbjct: 113 YNVYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQR--EEPLRILSKYHRFISF 170
Query: 179 CLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLVWFILPVSM 238
LY GF FVLSL K Y QF +F WTHV+LLI+VTQ H +I N++ G++WFI+P+S
Sbjct: 171 TLYLTGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISC 230
Query: 239 IVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPV 298
++ ND MAY+ GF+FGRTPLIKLSPKKTWEGFIGG TV+ +LL++ ++ + FVCPV
Sbjct: 231 VICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPV 290
Query: 299 QFTDGKYSYV--CEVGYIYRQQLYTVFN--------KEFYTYPILFHTIVISIFASLIGP 348
++ + S+ CE ++R Q Y + K YP H+ +S FASLIGP
Sbjct: 291 EYNNDTNSFTVDCEPSDLFRLQEYNIPGVIQSLVGWKTMRMYPFQIHS-ALSTFASLIGP 349
Query: 349 FGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIYRNTIQGLLD 408
FGGFFASGFKRAF IKDF++ IPGHGG++DRFDCQ+LM+TFV VYI +FI L+
Sbjct: 350 FGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKLIQ 409
Query: 409 NIYMLKPEQQLQLYYNLKQDLIARDILQN 437
L+P+QQL ++ LK L + IL +
Sbjct: 410 QFLTLRPDQQLHIFNTLKSHLTDKGILMS 438
>sp|P53439|CDSA_CAEEL Probable phosphatidate cytidylyltransferase OS=Caenorhabditis
elegans GN=C33H5.18 PE=2 SV=1
Length = 455
Score = 361 bits (926), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 191/446 (42%), Positives = 280/446 (62%), Gaps = 24/446 (5%)
Query: 2 SELKHRHIDTNAASGDASATPSTEANKPASSSS--SDVDNDDVAAVDLSKQIKQGTNKVP 59
++++ R + + A P+ + +P S S + D+ L++ I Q +
Sbjct: 10 ADVRQRRAPESPVTERLRA-PARDDARPTSDESDMEGILQDEDRLERLTQAIPQDKGSLG 68
Query: 60 GFIAQYIQS--EAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICVQVICFREIMTI 117
F +++ ++N ++R +F+I+M+ + ++ G ++ + +Q CF+EI++I
Sbjct: 69 VFADSMLEALPPRWRNWVVRGLFSIIMISTFTFIVTRGATWLMFLVFLIQFKCFQEIISI 128
Query: 118 GLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAALSFLVRYNTFIS 177
GL VY+ Y PW RA+++++L T NYF + + + L+K N L FLV Y+ +S
Sbjct: 129 GLAVYRLYDFPWFRALSWYFLLTSNYFFFGESLIDYWGIVLKKDNF--LHFLVAYHRLVS 186
Query: 178 FCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLVWFILPVS 237
F LY +GF++FVLSL+ YMRQFSLFAWTH++LL+IV+Q F+IQNI+ GL+WF+ PV+
Sbjct: 187 FALYCIGFVSFVLSLRKGYYMRQFSLFAWTHLTLLLIVSQSFFIIQNIFQGLIWFLAPVA 246
Query: 238 MIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCP 297
MI+ D M+Y+ GF++G+TPLIKLSPKKTWEGFIGGA TV+ ILL+ L +FVCP
Sbjct: 247 MIICCDIMSYMFGFFWGKTPLIKLSPKKTWEGFIGGAFSTVVFGILLSLALYNRPFFVCP 306
Query: 298 VQF--TDGKYSYVCEVGYIYRQQLYTVFNKEFYTY------------PILFHTIVISIFA 343
VQ TD S C + ++ Q Y V + Y P +FH+I +S+FA
Sbjct: 307 VQHYQTD---SSNCTIPLAFQLQDYPVPRPFSFVYKILRKEPIIQLCPFVFHSIALSLFA 363
Query: 344 SLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIYRNTI 403
S++GPFGGFFASGFKRAF IKDF D+IPGHGGL+DRFDCQ LM TFV VYI++FI
Sbjct: 364 SILGPFGGFFASGFKRAFKIKDFGDVIPGHGGLMDRFDCQLLMGTFVMVYIHSFIRVPDA 423
Query: 404 QGLLDNIYMLKPEQQLQLYYNLKQDL 429
LL I L+P+ QL ++ L+ +L
Sbjct: 424 SKLLKQIMTLEPQDQLNIFNLLQSEL 449
>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC13A2.03 PE=1 SV=1
Length = 439
Score = 298 bits (763), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 246/422 (58%), Gaps = 19/422 (4%)
Query: 27 NKPASSSSSDVDNDDVAAVDLSKQIKQGTNKVPGFIAQY--IQSEAYQNALIRVIFTILM 84
+ ++SD +N +V V T + P + ++ + + QN + R I+T L+
Sbjct: 4 KRTNKRNNSDKENGNVGVVQNKDSASSKTTE-PARLTKHKSLARKPSQNFITRTIWTFLL 62
Query: 85 LGFYVTLIWLGHIAIIVCIICVQVICFREIMTIGLTVYKGYSLPWIRAIAYHYLFTYNYF 144
LG + T + +GH +++ + VQ+ ++E++ I + LPW R I +++L T Y+
Sbjct: 63 LGIFFTALAMGHFWVVLLVTIVQIGVYKEVIAIASVPSREKDLPWTRFINWYFLMTTLYY 122
Query: 145 LYSAHVFAFIFHALRKPNTAALSFLVRYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLF 204
Y ++A+ FH L ++ L LV ++ FISF LY +GF+ FV SLK Y QFS F
Sbjct: 123 AYGESIYAY-FHHLFIMDSFMLP-LVLHHRFISFMLYIIGFVLFVASLKKGNYKFQFSQF 180
Query: 205 AWTHVSLLIIVTQCHFMIQNIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPK 264
WTH++LL++V Q HFMI N++ GL WF +PV +V ND AYLCG FG+ PLI++SPK
Sbjct: 181 CWTHMTLLLVVGQSHFMINNLFEGLFWFFVPVCYVVCNDVFAYLCGKMFGKHPLIQVSPK 240
Query: 265 KTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ-FTDGKYSYV-CEVGYIYRQQLYTV 322
KT EGF+GG I TV++ L+++ L F YF+CP + + +S + C ++ YT+
Sbjct: 241 KTVEGFLGGWICTVVIGSLISYVLMHFKYFICPTRDLSTSAFSGLNCTPNSVFLPHTYTI 300
Query: 323 ---------FNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGH 373
+ PI FH + + F+SLI PFGGFFASG KRAF IKDF IPGH
Sbjct: 301 PAVFVDTFRLPETITLAPIYFHLAIFATFSSLIAPFGGFFASGLKRAFKIKDFGASIPGH 360
Query: 374 GGLIDRFDCQFLMSTFVYVYIYTFIYRN--TIQGLLDN-IYMLKPEQQLQLYYNLKQDLI 430
GGL DR DCQFL FVY+Y +FI ++ LLD +Y L QQ+QL +L+ LI
Sbjct: 361 GGLTDRMDCQFLNGVFVYMYFQSFIAEKSTSVADLLDTAVYSLTTTQQVQLVEDLQNYLI 420
Query: 431 AR 432
+
Sbjct: 421 SH 422
>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabidopsis thaliana GN=CDS1
PE=2 SV=1
Length = 421
Score = 282 bits (722), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 248/433 (57%), Gaps = 41/433 (9%)
Query: 17 DASATPSTEANKPASSSSSDVDNDDVAAVDLSKQIKQGTNKVPGFIAQYIQSEAYQNALI 76
+ +++PST ++ S+ D V+ S + NK Y++ ++
Sbjct: 5 NVTSSPSTPVHRLRHRRRSNEVVTDGDKVNASPLLVNDRNK-------------YKSFMV 51
Query: 77 RVIFTILMLGFYVTLIWLGHIAIIVCIICVQVICFREIMTIGLTVYKGYSLPWIRAIAYH 136
R T+ M+G +V ++++GH+ I ++ +Q+ +E+ + + LP+I+ + +H
Sbjct: 52 RTYSTLWMIGGFVLVVYMGHLYITAMVVVIQIFMAKELFNLLRKAPEDKCLPYIKQLNWH 111
Query: 137 YLFTYNYFLYSAHVFAFIFHALRKPNTAA--------LSFLVRYNTFISFCLYTLGFITF 188
+ FT F+Y + + R NT +S L++Y+ I + LY +GF+ F
Sbjct: 112 FFFTAMLFVYGRIL------SQRLANTMTADQFFYRLVSGLIKYHMAICYLLYIIGFMWF 165
Query: 189 VLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLVWFILPVSMIVINDCMAYL 248
+L+LK K Y QF +AWTH+ L+++ TQ F + NI+ G+ WF+LP S+I+IND AY+
Sbjct: 166 ILTLKKKMYKYQFGQYAWTHMILIVVFTQSSFTVANIFEGIFWFLLPASLIIINDIFAYI 225
Query: 249 CGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFTDGKYSYV 308
GF+FGRTPLIKLSPKKTWEGFIG ++ T++ + +LA L +F + CP Q D ++
Sbjct: 226 FGFFFGRTPLIKLSPKKTWEGFIGASVTTIISAFVLANILGRFPWLTCPRQ--DLSTGWL 283
Query: 309 -CEVGYIYRQQLYTVFN--------KEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
C+ +++ + + + KE P+ +H + + +FAS+I PFGGFFASGFKR
Sbjct: 284 QCDADPLFKPEPFALPAWIPEWFPWKEMTILPVQWHALCLGLFASIIAPFGGFFASGFKR 343
Query: 360 AFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIYRN--TIQGLLDNIYM-LKPE 416
AF IKDF D IPGHGG+ DR DCQ +M+ F Y+Y+ +FI ++ +LD I L E
Sbjct: 344 AFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFIVSQSVSVDKILDQILTNLTFE 403
Query: 417 QQLQLYYNLKQDL 429
+Q L+ L Q L
Sbjct: 404 EQQALFVKLGQML 416
>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum tuberosum GN=CDS1
PE=2 SV=1
Length = 424
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/406 (38%), Positives = 239/406 (58%), Gaps = 35/406 (8%)
Query: 54 GTNKVPGFIAQ-------YIQSEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICV 106
G+N+VP + + Y++ LIR ++ M+G + +I++GH+ I ++ +
Sbjct: 22 GSNEVPPEVVKANGNHLLVNDRSKYKSMLIRAYSSVWMIGGFAFIIYMGHLYIWAMVVVI 81
Query: 107 QVICFREIMTIGLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAAL 166
Q+ +E+ + ++ LP R + +H+ FT F+Y + + R NT L
Sbjct: 82 QIFMAKELFNLLRRAHEDRHLPGFRLLNWHFFFTAMLFVYGRML------SQRLVNTVTL 135
Query: 167 -SFL-------VRYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQC 218
FL V+Y+ + Y GF+ F+L+LK K Y QFS +AWTH+ L+++ TQ
Sbjct: 136 DKFLYKLVGRFVKYHMVTCYFFYIAGFMWFILTLKKKMYKYQFSQYAWTHMILIVVFTQS 195
Query: 219 HFMIQNIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTV 278
F + NI+ G+ WF+LP S+IVIND AY GF+FGRTPLIKLSPKKTWEGFIG +I T+
Sbjct: 196 AFTVANIFEGIFWFLLPASLIVINDIAAYFFGFFFGRTPLIKLSPKKTWEGFIGASITTI 255
Query: 279 LLSILLAFYLTKFDYFVCPVQFTDGKYSYV-CEVGYIYRQQLYTV--------FNKEFYT 329
+ + LLA +F + CP + D ++ C+ G +++ + +T+ ++E
Sbjct: 256 ISAFLLANMFGRFQWLTCPRK--DLSTGWLDCDPGPLFKPEYFTLPEWFPAWFLSREIAV 313
Query: 330 YPILFHTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTF 389
P+ +H +++ +FAS+I PFGGFFASGFKRAF IKDF D IPGHGG+ DR DCQ +M+ F
Sbjct: 314 LPVQWHALLLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVF 373
Query: 390 VYVYIYTFIYRN--TIQGLLDNIYM-LKPEQQLQLYYNLKQDLIAR 432
Y+Y +FI +I+ +LD I + L E+QL +Y L Q + R
Sbjct: 374 AYIYHQSFIVPQNLSIEMILDQIILNLTFEEQLAVYKKLGQIIQER 419
>sp|P38221|CDS1_YEAST Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDS1 PE=1 SV=1
Length = 457
Score = 258 bits (659), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 231/421 (54%), Gaps = 41/421 (9%)
Query: 14 ASGDASATPSTEANKPASSSSSDVDNDDVAAVDLSKQIKQGTNKVPGFIAQYIQSEAYQN 73
A+ A E +K AS S + V + AA S++ N
Sbjct: 23 ATSKAIDKLQEELHKDASESVTPVTKESTAATKESRK---------------------YN 61
Query: 74 ALIRVIFTILML-GFYVTLIWLGHIAIIVCIICVQVICFREIMTIGLTVYKGYSLPWIRA 132
IR ++T +M+ GF++TL GH IV I+ Q+ F+E + + + +LP +
Sbjct: 62 FFIRTVWTFVMISGFFITLAS-GHAWCIVLILGCQIATFKECIAVTSASGREKNLPLTKT 120
Query: 133 IAYHYLFTYNYFLYSAHVFAFIFHAL--RKPNTAALSFLVRYNTFISFCLYTLGFITFVL 190
+ ++ LFT Y+L +F F F A P L+F+V + FI +CLY +GF+ FV
Sbjct: 121 LNWYLLFTTIYYLDGKSLFKF-FQATFYEYP---VLNFIVTNHKFICYCLYLMGFVLFVC 176
Query: 191 SLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLVWFILPVSMIVINDCMAYLCG 250
SL+ QF TH+ LL++V Q H +I+N+ NGL WF+LP ++++ND AYLCG
Sbjct: 177 SLRKGFLKFQFGSLCVTHMVLLLVVFQAHLIIKNVLNGLFWFLLPCGLVIVNDIFAYLCG 236
Query: 251 FYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ--FTDGKYSYV 308
FG+T LI++SPKKT EGF+G FT L SI+L L+ + Y CPV+ T+ +
Sbjct: 237 ITFGKTKLIEISPKKTLEGFLGAWFFTALASIILTRILSPYTYLTCPVEDLHTNFFSNLT 296
Query: 309 CEVGYIYRQQLYTV----FNK----EFYTYPILFHTIVISIFASLIGPFGGFFASGFKRA 360
CE+ ++ Q+Y + F+K PI FH + ++ FASL PFGGFFASG KR
Sbjct: 297 CELNPVFLPQVYRLPPIFFDKVQINSITVKPIYFHALNLATFASLFAPFGGFFASGLKRT 356
Query: 361 FNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFI--YRNTIQGLLDNIYMLKPEQQ 418
F +KDF IPGHGG+ DR DCQF+M +F +Y TFI +R T+ +L I M ++Q
Sbjct: 357 FKVKDFGHSIPGHGGITDRVDCQFIMGSFANLYYETFISEHRITVDTVLSTILMNLNDKQ 416
Query: 419 L 419
+
Sbjct: 417 I 417
>sp|Q55D90|CDSA_DICDI Probable phosphatidate cytidylyltransferase OS=Dictyostelium
discoideum GN=cdsA PE=3 SV=1
Length = 479
Score = 253 bits (645), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 224/399 (56%), Gaps = 24/399 (6%)
Query: 51 IKQGTNKVPGFIAQYIQSEAYQNALIRVIFTILMLGFYVTLIWLGHIAIIVCIICVQVIC 110
I N A S Y+ IR + M+GF+ ++ H + + +I +Q++
Sbjct: 76 IDSSVNNADNLKATDPPSAKYKKLAIRSVMGAFMIGFFTIVLSTDHFIVALFVIALQLLV 135
Query: 111 FREIMTIGLTVYKGYSLPWIRAIAYHYLFTYNYFLYSAHVFAFIFHALRKPNTAALSFLV 170
F+E++ + K +P R + + +LFT +F Y+ + I A P+ V
Sbjct: 136 FKEMIALRYIEAKEKKIPHFRTLNWFFLFTSFFFFYAKPIL--ITLANYYPDI--FQHFV 191
Query: 171 RYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGLV 230
RY+ + SF LY +GF+ F+L+L+ Y QFS WT + L+++V Q +F+I NIY GL+
Sbjct: 192 RYHLWHSFSLYCIGFVLFILTLRKGVYRYQFSQLTWTLMILMMVVVQSNFLISNIYQGLI 251
Query: 231 WFILPVSMIVINDCMAYLCGFYFGRT----PLIKLSPKKTWEGFIGGAIFTVLLSILLAF 286
WFILPVS+IV ND AY GF+ G+ PL+K+SP KTWEGFIG +T+L +
Sbjct: 252 WFILPVSIIVCNDIFAYFNGFFLGKKFINRPLMKISPNKTWEGFIGATGWTLLFAYYFCG 311
Query: 287 YLTKFDYFVCPVQFTDGKYSYVC-------EVGYIYRQQLYTVFNKEF------YTY-PI 332
+L K+D+ VCP T S C E +I+ ++ T+ K +TY PI
Sbjct: 312 FLLKYDWIVCPKGNTGFMESLHCTRDPVFLEKEFIFPPEITTIAFKYLGITLLPFTYIPI 371
Query: 333 LFHTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYV 392
FH +V+++F SLI PFGGFFASG KRA+ +KDF I PGHGG+ DR DCQF+M F++V
Sbjct: 372 QFHALVLALFGSLIAPFGGFFASGIKRAYKVKDFDTIFPGHGGVTDRTDCQFIMGLFIHV 431
Query: 393 YIYTFIYRNTIQG--LLDNIYMLKPEQQLQLYYNLKQDL 429
Y TFI I + NI ML E+++ +Y LKQ +
Sbjct: 432 YYNTFIKTLEIDPTFIWQNIMMLSMEEKMVIYEKLKQSI 470
>sp|Q95ZE3|CDS1_ENCCU Phosphatidate cytidylyltransferase OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDS1 PE=3 SV=1
Length = 393
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 81/230 (35%), Positives = 109/230 (47%), Gaps = 12/230 (5%)
Query: 170 VRYNTFISFCLYTLGFITFVLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFMIQNIYNGL 229
+R +F+ F Y F+ FV SL+ Q LFA H+S + I N+ G
Sbjct: 138 LRRLSFVCFYSYVAAFMCFVASLRKGRLKPQLGLFALIHLSTYTMAIAAKCAIFNLNKGR 197
Query: 230 VWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLT 289
WF+ P +++ ND AY+ G G+ PL +LSPKKT EGFIG IFT + L
Sbjct: 198 FWFVFPALLVISNDISAYVVGKSIGKRPLYRLSPKKTLEGFIGAFIFTTAVGFALGHL-- 255
Query: 290 KFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPF 349
+ + + + +TVF I H I AS + PF
Sbjct: 256 ----------HVNSGFLRDADSEQFQKFMKFTVFGANVRVQSIYIHIIPFIFVASFVAPF 305
Query: 350 GGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTFIY 399
GF AS KRA+ KDF + I GHGG+ DR DCQ L++ F YI +FIY
Sbjct: 306 SGFLASALKRAYKKKDFGEAISGHGGIADRMDCQVLIAIFASTYISSFIY 355
>sp|P75160|CDSA_MYCPN Putative phosphatidate cytidylyltransferase OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=cdsA PE=3 SV=1
Length = 395
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 234 LPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVL-LSILLAFYLTKFD 292
L +++ V D AYL G FG+ PLIK+SP KTWEG G TVL +SI+ Y +
Sbjct: 206 LLIAIGVCTDTFAYLFGKRFGKNPLIKISPSKTWEGAFFGVTGTVLTISIICVLYSIP-N 264
Query: 293 YFVCPVQFTDGKYSYVCEVGYIYRQQLYTVF-------NKEFYTYPILFHTIVISIFASL 345
Y P K + Y + VF FY Y + T+ + AS+
Sbjct: 265 YVRQPSIKDASKTALQTPQNYDVHNLITNVFLISFISGGSTFYIYWWV-STLALIFTASI 323
Query: 346 IGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
G F S KR IKDFS ++ HGG++DRFD
Sbjct: 324 FAIGGDLFFSYIKRLTKIKDFSKLLGKHGGILDRFD 359
>sp|Q4L5W3|CDSA_STAHJ Phosphatidate cytidylyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=cdsA PE=3 SV=1
Length = 260
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AY+ G G+ L +SP KT EGFIGG I ++++ I++ F
Sbjct: 142 LTDTGAYIFGRLMGKHKLWPVISPNKTIEGFIGGLICSLIVPIVMLF------------- 188
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
F D FN + +L TI++SIF G G SGFKR
Sbjct: 189 FVD--------------------FNLNIWL--LLLVTIILSIF----GQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q92I31|CDSA_RICCN Phosphatidate cytidylyltransferase OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=cdsA PE=3 SV=1
Length = 230
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 66/151 (43%), Gaps = 34/151 (22%)
Query: 243 DCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFT 301
D A + G F L KLSPKKTW G + G + L+++L++F
Sbjct: 108 DTFAMIGGKTFKGAKLAPKLSPKKTWSGLVTGVLSAGLVAVLVSFIPN------------ 155
Query: 302 DGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAF 361
F+ E Y + + +IS +LI F S FKR F
Sbjct: 156 ---------------------FHIENYYFSNKIYLFIISCILALIAQLSDLFISYFKRKF 194
Query: 362 NIKDFSDIIPGHGGLIDRFDCQFLMSTFVYV 392
NIKD IIPGHGG++DRFD L + +++
Sbjct: 195 NIKDSGHIIPGHGGVLDRFDSIILTTLILFL 225
>sp|Q68WV5|CDSA_RICTY Phosphatidate cytidylyltransferase OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=cdsA PE=3 SV=1
Length = 228
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 243 DCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFT 301
D A + G F T L K+SPKKTW G I G I L+++L++
Sbjct: 106 DTFAMIGGKTFKGTKLAPKISPKKTWTGLIIGTISAGLIAVLVSL--------------- 150
Query: 302 DGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAF 361
+ Y + + Y F+ + Y + +IS +LI F S FKR F
Sbjct: 151 ---------IPYYHIENYY--FSNKIYLF-------IISCILALIAQSSDLFISYFKRKF 192
Query: 362 NIKDFSDIIPGHGGLIDRFDCQFLMS 387
NIKD IIPGHGG++DRFD L +
Sbjct: 193 NIKDSGHIIPGHGGVLDRFDSIILTA 218
>sp|P0ABG3|CDSA_SHIFL Phosphatidate cytidylyltransferase OS=Shigella flexneri GN=cdsA
PE=3 SV=2
Length = 285
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 40/160 (25%)
Query: 223 QNIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLS 281
+N Y+G +W + + ++ D AY+ G FG+ L K+SP KTW+GFIGG ++S
Sbjct: 145 ENHYSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVIS 204
Query: 282 ILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISI 341
+ D V PV ++ SI
Sbjct: 205 WGYGMW-ANLD--VAPVTL------------------------------------LICSI 225
Query: 342 FASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
A+L G S FKR IKD +IPGHGG++DR D
Sbjct: 226 VAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRID 265
>sp|P0ABG1|CDSA_ECOLI Phosphatidate cytidylyltransferase OS=Escherichia coli (strain K12)
GN=cdsA PE=1 SV=2
Length = 285
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 40/160 (25%)
Query: 223 QNIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLS 281
+N Y+G +W + + ++ D AY+ G FG+ L K+SP KTW+GFIGG ++S
Sbjct: 145 ENHYSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVIS 204
Query: 282 ILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISI 341
+ D V PV ++ SI
Sbjct: 205 WGYGMW-ANLD--VAPVTL------------------------------------LICSI 225
Query: 342 FASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
A+L G S FKR IKD +IPGHGG++DR D
Sbjct: 226 VAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRID 265
>sp|P0ABG2|CDSA_ECO57 Phosphatidate cytidylyltransferase OS=Escherichia coli O157:H7
GN=cdsA PE=3 SV=2
Length = 285
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 40/160 (25%)
Query: 223 QNIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLS 281
+N Y+G +W + + ++ D AY+ G FG+ L K+SP KTW+GFIGG ++S
Sbjct: 145 ENHYSGAIWLLYVMILVWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVIS 204
Query: 282 ILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISI 341
+ D V PV ++ SI
Sbjct: 205 WGYGMW-ANLD--VAPVTL------------------------------------LICSI 225
Query: 342 FASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
A+L G S FKR IKD +IPGHGG++DR D
Sbjct: 226 VAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRID 265
>sp|Q1RII7|CDSA_RICBR Phosphatidate cytidylyltransferase OS=Rickettsia bellii (strain
RML369-C) GN=cdsA PE=3 SV=1
Length = 231
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 66/150 (44%), Gaps = 34/150 (22%)
Query: 243 DCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFT 301
D A + G G L K+SPKKTW G I G + L++ L++F P +
Sbjct: 108 DIFAMIGGKTLGGAKLAPKISPKKTWSGLITGILSAGLVATLISF---------IPSFYI 158
Query: 302 DGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAF 361
+ Y F+ Y + +IS +L F S FKR F
Sbjct: 159 ENYY-----------------FSNRIYLF-------IISCTLALTAQLSDLFISYFKRKF 194
Query: 362 NIKDFSDIIPGHGGLIDRFDCQFLMSTFVY 391
NIKD +IIPGHGG++DRFD L + ++
Sbjct: 195 NIKDSGNIIPGHGGVLDRFDSIILTAPILF 224
>sp|Q9ZDA8|CDSA_RICPR Phosphatidate cytidylyltransferase OS=Rickettsia prowazekii (strain
Madrid E) GN=cdsA PE=3 SV=1
Length = 228
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 34/146 (23%)
Query: 243 DCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFT 301
D A + G F L K+SPKKTW G I G + L+S+L++
Sbjct: 106 DTFAMIGGKTFKGIKLAPKISPKKTWTGLITGTVSAGLVSVLVS---------------- 149
Query: 302 DGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAF 361
L ++ E Y + + +IS +LI F S FKR F
Sbjct: 150 -----------------LIPNYHIEHYYFSNKIYLFIISCILALIAQSSDLFISYFKRKF 192
Query: 362 NIKDFSDIIPGHGGLIDRFDCQFLMS 387
NIKD IIPGHGG++DRFD L +
Sbjct: 193 NIKDSGHIIPGHGGVLDRFDSIILTA 218
>sp|Q8CST9|CDSA_STAES Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=cdsA PE=3 SV=1
Length = 260
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 40/157 (25%)
Query: 227 NGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLA 285
GL + + ++ + D AY+ G G+ L +SP KT EGF GG + ++L+ +++
Sbjct: 128 EGLRYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQ 187
Query: 286 FYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASL 345
++ + + +L TIV+S+F
Sbjct: 188 MFV-----------------------------------DLHMNIWLLLLVTIVLSMF--- 209
Query: 346 IGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDC 382
G G SGFKR F +KD I+PGHGG++DRFD
Sbjct: 210 -GQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDS 245
>sp|Q5HPT0|CDSA_STAEQ Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=cdsA PE=3 SV=1
Length = 260
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 40/157 (25%)
Query: 227 NGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLA 285
GL + + ++ + D AY+ G G+ L +SP KT EGF GG + ++L+ +++
Sbjct: 128 EGLRYILFAFLIVWLTDTGAYIFGRLMGKHKLWPVISPNKTIEGFFGGILCSILVPLVMQ 187
Query: 286 FYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASL 345
++ + + +L TIV+S+F
Sbjct: 188 MFV-----------------------------------DLHMNIWLLLLVTIVLSMF--- 209
Query: 346 IGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDC 382
G G SGFKR F +KD I+PGHGG++DRFD
Sbjct: 210 -GQLGDLVESGFKRHFGVKDSGRILPGHGGILDRFDS 245
>sp|Q49433|CDSA_MYCGE Putative phosphatidate cytidylyltransferase OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=cdsA PE=3 SV=1
Length = 305
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 234 LPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDY 293
L +S+ V D +L G FG+ PLIK+SP KTWEG G I T+++ LL L +
Sbjct: 112 LLMSLAVSVDTFPFLFGKRFGKNPLIKISPSKTWEGAFFGIISTIVVVALLC-VLYSIPF 170
Query: 294 FVCPVQF--TDGKYSYVCEVGYIYRQQLYTVF-------NKEFYTYPILFHTIVISIFAS 344
FV F T+G + Y + +F FY Y + T+ + S
Sbjct: 171 FVAKPTFNQTNG-IALNTPQNYDSHNLITNIFLIAFISGGSSFYIYWWV-STLALIFTGS 228
Query: 345 LIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDR 379
+ G F S KR +IKDFS ++ HGG++DR
Sbjct: 229 VFAIGGDLFFSYIKRLISIKDFSKVLGKHGGVLDR 263
>sp|O67292|CDSA_AQUAE Phosphatidate cytidylyltransferase OS=Aquifex aeolicus (strain VF5)
GN=cdsA PE=3 SV=1
Length = 259
Score = 62.4 bits (150), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 62/145 (42%), Gaps = 45/145 (31%)
Query: 239 IVINDCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCP 297
I IND AY G FG+TPL K+SPKKT EGF+GG +F L F LT
Sbjct: 138 IWINDVFAYYIGKNFGKTPLFPKISPKKTVEGFLGGVLFGSLF-----FALT-------- 184
Query: 298 VQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGF 357
Y IL ++ ++ F +G G +F S
Sbjct: 185 ------------------------------LPYGIL-NSFLLGTFVLTVGVAGDYFKSFI 213
Query: 358 KRAFNIKDFSDIIPGHGGLIDRFDC 382
KR IKDFS++ HGG DRFD
Sbjct: 214 KRQVGIKDFSNVFGEHGGFTDRFDA 238
>sp|P63758|CDSA_MYCTU Phosphatidate cytidylyltransferase OS=Mycobacterium tuberculosis
GN=cdsA PE=3 SV=1
Length = 306
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 43/167 (25%)
Query: 218 CHFMIQNIY--NGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGA 274
C F +Y NG W + ++ +D Y G FG+ P++ +SPKK+WEGF G
Sbjct: 163 CSFGAMLVYPENGSGWVFCMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSL 222
Query: 275 IFTVLLSILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILF 334
+ + +I+ A +L GK ++
Sbjct: 223 VCGITATIITATFLV-------------GKTPWIGA------------------------ 245
Query: 335 HTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
++ + L G S KR IKD ++PGHGGL+DR D
Sbjct: 246 ---LLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLD 289
>sp|P63759|CDSA_MYCBO Phosphatidate cytidylyltransferase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cdsA PE=3 SV=1
Length = 306
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 66/167 (39%), Gaps = 43/167 (25%)
Query: 218 CHFMIQNIY--NGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGA 274
C F +Y NG W + ++ +D Y G FG+ P++ +SPKK+WEGF G
Sbjct: 163 CSFGAMLVYPENGSGWVFCMMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEGFAGSL 222
Query: 275 IFTVLLSILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILF 334
+ + +I+ A +L GK ++
Sbjct: 223 VCGITATIITATFLV-------------GKTPWIGA------------------------ 245
Query: 335 HTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
++ + L G S KR IKD ++PGHGGL+DR D
Sbjct: 246 ---LLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLD 289
>sp|Q7A121|CDSA_STAAW Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MW2) GN=cdsA PE=3 SV=1
Length = 260
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AYL G G+ L +SP KT EGFIGG +F L+ L Y F+ V
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGG-LFCSLIVPLAMLYFVDFNMNV---- 196
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
+ +L T+++S+F G G SGFKR
Sbjct: 197 ------------------------------WILLGVTLILSLF----GQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q6G9V2|CDSA_STAAS Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=cdsA PE=3 SV=1
Length = 260
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AYL G G+ L +SP KT EGFIGG +F L+ L Y F+ V
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGG-LFCSLIVPLAMLYFVDFNMNV---- 196
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
+ +L T+++S+F G G SGFKR
Sbjct: 197 ------------------------------WILLGVTLILSLF----GQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q6GHH4|CDSA_STAAR Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=cdsA PE=3 SV=1
Length = 260
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AYL G G+ L +SP KT EGFIGG +F L+ L Y F+ V
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGG-LFCSLIVPLAMLYFVDFNMNV---- 196
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
+ +L T+++S+F G G SGFKR
Sbjct: 197 ------------------------------WILLGVTLILSLF----GQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q7A5Y4|CDSA_STAAN Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
N315) GN=cdsA PE=3 SV=1
Length = 260
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AYL G G+ L +SP KT EGFIGG +F L+ L Y F+ V
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGG-LFCSLIVPLAMLYFVDFNMNV---- 196
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
+ +L T+++S+F G G SGFKR
Sbjct: 197 ------------------------------WILLGVTLILSLF----GQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q99UL1|CDSA_STAAM Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=cdsA PE=3 SV=1
Length = 260
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AYL G G+ L +SP KT EGFIGG +F L+ L Y F+ V
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGG-LFCSLIVPLAMLYFVDFNMNV---- 196
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
+ +L T+++S+F G G SGFKR
Sbjct: 197 ------------------------------WILLGVTLILSLF----GQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q5HGH0|CDSA_STAAC Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
COL) GN=cdsA PE=3 SV=1
Length = 260
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 63/143 (44%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AYL G G+ L +SP KT EGFIGG +F L+ L Y F+ V
Sbjct: 142 LTDTGAYLFGKMMGKHKLWPVISPNKTIEGFIGG-LFCSLIVPLAMLYFVDFNMNV---- 196
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
+ +L T+++S+F G G SGFKR
Sbjct: 197 ------------------------------WILLGVTLILSLF----GQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q4ULR7|CDSA_RICFE Phosphatidate cytidylyltransferase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=cdsA PE=3 SV=1
Length = 227
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 63/150 (42%), Gaps = 34/150 (22%)
Query: 243 DCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFT 301
D A + G F L K+SPKKTW G + G + L+++L +F
Sbjct: 106 DSFAMIGGKTFKGAKLAPKISPKKTWSGLVTGVLSAGLVAVLASFIPN------------ 153
Query: 302 DGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAF 361
F+ E Y + + +IS +LI F S KR F
Sbjct: 154 ---------------------FHIENYYFSNKIYLFIISCILALIAQSSDLFISYLKRKF 192
Query: 362 NIKDFSDIIPGHGGLIDRFDCQFLMSTFVY 391
NIKD IIPGHGG++DRFD L + ++
Sbjct: 193 NIKDSGHIIPGHGGVLDRFDSIILTAPVLF 222
>sp|O31752|CDSA_BACSU Phosphatidate cytidylyltransferase OS=Bacillus subtilis (strain
168) GN=cdsA PE=3 SV=1
Length = 269
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 40/157 (25%)
Query: 242 NDCMAYLCGFYFGRTPL-IKLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQF 300
D AY G G+ L ++SP KT EGF GG + ++L+ + F Q
Sbjct: 151 TDSGAYFVGKSLGKRKLWPEISPNKTVEGFAGGIVIALVLATI----------FQLVAQL 200
Query: 301 TDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRA 360
+ YIY ++I++F S+ G G S KR
Sbjct: 201 ---------PIPYIY--------------------LLLITLFLSVFGQLGDLVESALKRH 231
Query: 361 FNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTF 397
+++KD +I+PGHGG++DRFD + F+Y + F
Sbjct: 232 YDVKDSGNILPGHGGILDRFDSFLFVMPFLYFLLALF 268
>sp|Q9CBU1|CDSA_MYCLE Phosphatidate cytidylyltransferase OS=Mycobacterium leprae (strain
TN) GN=cdsA PE=3 SV=1
Length = 312
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 57/144 (39%), Gaps = 41/144 (28%)
Query: 239 IVINDCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCP 297
+V +D Y G FG+ PL+ ++SP K+WEGF G + +IL A +L
Sbjct: 192 VVASDVGGYTVGVLFGKHPLVPRISPNKSWEGFAGSLVCGTTATILTATFLA-------- 243
Query: 298 VQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGF 357
GK +V ++S L G S
Sbjct: 244 -----GKTPWVGA---------------------------LLSFVLVLTCTLGDLVESQV 271
Query: 358 KRAFNIKDFSDIIPGHGGLIDRFD 381
KR IKD ++PGHGGL+DR D
Sbjct: 272 KRDLGIKDMGRLLPGHGGLMDRLD 295
>sp|P73548|CDSA_SYNY3 Phosphatidate cytidylyltransferase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cdsA PE=3 SV=1
Length = 293
Score = 58.9 bits (141), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 223 QNIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSI 282
+N GL+ IL + I D AY+ G + GRT L +SPKKT EG + G ++L+ +
Sbjct: 151 ENFPTGLLVTILAFACIWAADIGAYIMGKWLGRTRLSDISPKKTVEGSLWGVGGSLLVGV 210
Query: 283 LLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIF 342
L A+YL ++ Y G + + +
Sbjct: 211 LGAWYL---------------QWPYWEITGAL------------------------LGLL 231
Query: 343 ASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVY 391
++ G S KR +KD +IPGHGG++DR D + VY
Sbjct: 232 IGIVSLLGDLTESMMKRDAGVKDSGQLIPGHGGILDRTDSYVFTAPLVY 280
>sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=cdsA PE=3
SV=1
Length = 288
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 36/161 (22%)
Query: 223 QNIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLS 281
+ Y+GL + ++ D AY G FG+ L K+SP K+WEG IGG I ++L+
Sbjct: 147 HDPYHGLFLLLYVFILVWAADSGAYFSGRAFGKRKLAPKVSPGKSWEGVIGGLITALVLA 206
Query: 282 ILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISI 341
+ +I+ V ++ + I++S+
Sbjct: 207 FI-----------------------------FIHFSNNTLVGDRNITGF------IILSV 231
Query: 342 FASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDC 382
I G S FKR +KD S +IPGHGG++DR D
Sbjct: 232 ATVAISVLGDLTESMFKRESGVKDSSQLIPGHGGVLDRIDS 272
>sp|Q9ZML7|CDSA_HELPJ Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
J99) GN=cdsA PE=3 SV=1
Length = 266
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 44/175 (25%)
Query: 229 LVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYL 288
++W ++ ++V +D A+ G G+TP SP KT EG + I VL S+L
Sbjct: 129 IIWLLV---VVVASDVGAFFGGKLLGKTPFTATSPNKTLEGAL---IGVVLASVL----- 177
Query: 289 TKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGP 348
FV + + G + +LF S +L+
Sbjct: 178 ---GSFVGMGKLSGG------------------------FLMALLF-----SFLIALMAV 205
Query: 349 FGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTF-IYRNT 402
FG + S KR +KD I+PGHGG++DR D + ++V +Y I++ T
Sbjct: 206 FGDLYESYLKRKVGVKDSGKILPGHGGVLDRLDSMLFGALSLHVLLYFLEIWKET 260
>sp|Q49X46|CDSA_STAS1 Phosphatidate cytidylyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=cdsA PE=3 SV=1
Length = 260
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 40/143 (27%)
Query: 241 INDCMAYLCGFYFGRTPLIK-LSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQ 299
+ D AY+ G G+ L +SP KT EGF+GG I ++++ +++ ++
Sbjct: 142 LTDTGAYIFGRLMGKHKLWPVISPNKTVEGFVGGLICSLIVPLVMMIFVD---------- 191
Query: 300 FTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKR 359
FN + ++I+I S+ G G SGFKR
Sbjct: 192 -----------------------FNIALWL------LLIITIILSMFGQLGDLVESGFKR 222
Query: 360 AFNIKDFSDIIPGHGGLIDRFDC 382
F +KD I+PGHGG++DRFD
Sbjct: 223 HFGVKDSGRILPGHGGILDRFDS 245
>sp|Q9X1B7|CDSA_THEMA Phosphatidate cytidylyltransferase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=cdsA PE=3
SV=1
Length = 270
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 62/151 (41%), Gaps = 35/151 (23%)
Query: 243 DCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFT 301
D AY G FGRT + + SP+K+ EG IGG + V+ + L
Sbjct: 144 DSFAYFTGLKFGRTRISPRYSPRKSLEGVIGGFLGVVIYTFL------------------ 185
Query: 302 DGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAF 361
Y V L +V F T+ T+ I + FG F S KR +
Sbjct: 186 ---YRLVV-------NDLLSVNVISFRTFLPFAATVAI------MDTFGDIFESALKRHY 229
Query: 362 NIKDFSDIIPGHGGLIDRFDCQFLMSTFVYV 392
+KD +PGHGG++DR D ++ Y+
Sbjct: 230 GVKDSGKTLPGHGGMLDRIDGLLFVAPVSYI 260
>sp|O25004|CDSA_HELPY Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=cdsA PE=3 SV=1
Length = 266
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 44/175 (25%)
Query: 229 LVWFILPVSMIVINDCMAYLCGFYFGRTPLIKLSPKKTWEGFIGGAIFTVLLSILLAFYL 288
++W ++ ++V +D A+ G G+TP SP KT EG L+ ++LA L
Sbjct: 129 IIWLLV---VVVASDVGAFFGGKLLGKTPFTPTSPNKTLEG--------ALIGVVLASVL 177
Query: 289 TKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHTIVISIFASLIGP 348
F V + + G F + S +L+
Sbjct: 178 GSF---VGMGKLSGG-----------------------------FFMALFFSFLIALVAV 205
Query: 349 FGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDCQFLMSTFVYVYIYTF-IYRNT 402
FG + S KR IKD I+PGHGG++DR D + ++ +Y I++ T
Sbjct: 206 FGDLYESYLKRKVGIKDSGKILPGHGGVLDRLDSMLFGALGLHALLYFLEIWKET 260
>sp|P76091|YNBB_ECOLI Uncharacterized protein YnbB OS=Escherichia coli (strain K12)
GN=ynbB PE=3 SV=1
Length = 298
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 87/225 (38%), Gaps = 51/225 (22%)
Query: 168 FLVRYNTFISFCLYT--LGFITF----VLSLKPKCYMRQFSLFAWTHVSLLIIVTQCHFM 221
L+ +N F F L+ GF+ VL P ++ S W + + ++ ++
Sbjct: 96 LLIGFNCFELFLLFIPLAGFLILATGQVLVGDPSGFLHTVSAIFWGWIMTVFALSHAAWL 155
Query: 222 IQ----NIYNGLVWFILPVSMIVINDCMAYLCGFYFGRTPLI-KLSPKKTWEGFIGGAIF 276
+ NI G + + +++ ND YL G GR ++ K+SP KT EG +GG I
Sbjct: 156 LMLPTTNIQGGALLVLFLLALTESNDIAQYLWGKSCGRRKVVPKVSPGKTLEGLMGGVIT 215
Query: 277 TVLLSILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTVFNKEFYTYPILFHT 336
++ S+++ LT +
Sbjct: 216 IMIASLIIGPLLTPLNT----------------------------------------LQA 235
Query: 337 IVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
++ + + G G S KR +KD ++PGHGGL+DR D
Sbjct: 236 LLAGLLIGISGFCGDVVMSAIKRDIGVKDSGKLLPGHGGLLDRID 280
>sp|Q59640|CDSA_PSEAE Phosphatidate cytidylyltransferase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=cdsA PE=3 SV=2
Length = 271
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 75/180 (41%), Gaps = 47/180 (26%)
Query: 209 VSLLIIVTQCHFMI----QNIYNGLVWFILPVSMIVIN-DCMAYLCGFYFGRTPLI-KLS 262
+ LLI++ ++ + NGL I+ V ++V D AY G FG+ L ++S
Sbjct: 113 MGLLILLPAWQGLVLLKQWPLANGL---IIAVMVLVWGADIGAYFSGKAFGKRKLAPRVS 169
Query: 263 PKKTWEGFIGGAIFTVLLSILLAFYLTKFDYFVCPVQFTDGKYSYVCEVGYIYRQQLYTV 322
P K+WEG GG L+I LA VG L +
Sbjct: 170 PGKSWEGVYGG--LAASLAITLA-------------------------VGLYRGWSLGAL 202
Query: 323 FNKEFYTYPILFHTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFDC 382
++F +IV + S+ FKR IKD S+++PGHGG++DR D
Sbjct: 203 LLALLGAALVVFVSIVGDLTESM-----------FKRQSGIKDSSNLLPGHGGVLDRIDS 251
>sp|Q8YHH2|CDSA_BRUME Phosphatidate cytidylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=cdsA PE=3 SV=2
Length = 270
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 331 PILFHTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
P + V+++ S++ G S KR F KD ++PGHGG++DR D
Sbjct: 191 PGGWGVPVLALLLSIVSQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|P0C102|CDSA_BRUAB Phosphatidate cytidylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=cdsA PE=3 SV=1
Length = 270
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 331 PILFHTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
P + V+++ S++ G S KR F KD ++PGHGG++DR D
Sbjct: 191 PGGWGVPVLALLLSIVSQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|Q2YRP9|CDSA_BRUA2 Phosphatidate cytidylyltransferase OS=Brucella abortus (strain
2308) GN=cdsA PE=3 SV=1
Length = 270
Score = 40.4 bits (93), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 331 PILFHTIVISIFASLIGPFGGFFASGFKRAFNIKDFSDIIPGHGGLIDRFD 381
P + V+++ S++ G S KR F KD ++PGHGG++DR D
Sbjct: 191 PGGWGVPVLALLLSIVSQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.145 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 156,897,293
Number of Sequences: 539616
Number of extensions: 6466452
Number of successful extensions: 22896
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 22748
Number of HSP's gapped (non-prelim): 130
length of query: 439
length of database: 191,569,459
effective HSP length: 121
effective length of query: 318
effective length of database: 126,275,923
effective search space: 40155743514
effective search space used: 40155743514
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 63 (28.9 bits)