RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9638
         (85 letters)



>g1qd6.1 f.4.2.1 (A:,C:) Outer membrane phospholipase A (OMPLA)
           {Escherichia coli [TaxId: 562]}
          Length = 253

 Score = 22.8 bits (49), Expect = 6.8
 Identities = 6/29 (20%), Positives = 15/29 (51%)

Query: 40  YASYMGHYNMLNLFSINENEAKARVRFNF 68
              YMG+Y +   + + +    A+ ++N+
Sbjct: 172 ITKYMGYYQLKIGYHLGDAVLSAKGQYNW 200


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.135    0.417 

Gapped
Lambda     K      H
   0.267   0.0654    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 328,718
Number of extensions: 12249
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 7
Length of query: 85
Length of database: 2,407,596
Length adjustment: 50
Effective length of query: 35
Effective length of database: 1,721,096
Effective search space: 60238360
Effective search space used: 60238360
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.0 bits)