Query psy9639
Match_columns 321
No_of_seqs 344 out of 1631
Neff 8.3
Searched_HMMs 46136
Date Sat Aug 17 00:49:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9639.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9639hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01251 PH_centaurin_alpha Cen 99.9 1E-25 2.2E-30 175.6 12.9 98 181-278 1-99 (103)
2 cd01233 Unc104 Unc-104 pleckst 99.9 2.5E-22 5.4E-27 155.8 12.2 95 179-278 2-97 (100)
3 cd01264 PH_melted Melted pleck 99.9 1.1E-21 2.3E-26 150.7 11.7 96 181-279 2-101 (101)
4 cd01260 PH_CNK Connector enhan 99.9 1.2E-21 2.6E-26 150.9 12.0 92 180-278 1-96 (96)
5 cd01265 PH_PARIS-1 PARIS-1 ple 99.9 1.2E-21 2.6E-26 150.4 11.5 89 182-278 2-93 (95)
6 cd01238 PH_Tec Tec pleckstrin 99.9 1.8E-21 3.9E-26 152.4 11.9 95 180-277 1-105 (106)
7 cd01235 PH_SETbf Set binding f 99.9 5.2E-21 1.1E-25 148.6 11.9 95 181-279 1-101 (101)
8 cd01236 PH_outspread Outspread 99.9 7.7E-21 1.7E-25 147.3 11.5 91 181-276 1-101 (104)
9 cd01247 PH_GPBP Goodpasture an 99.8 1.6E-20 3.5E-25 142.8 12.4 87 181-277 1-90 (91)
10 cd01257 PH_IRS Insulin recepto 99.8 2.2E-20 4.7E-25 144.2 12.0 89 178-277 1-100 (101)
11 cd01233 Unc104 Unc-104 pleckst 99.8 8.1E-20 1.8E-24 141.7 12.2 92 57-154 2-97 (100)
12 cd01252 PH_cytohesin Cytohesin 99.8 9.1E-20 2E-24 147.2 12.6 114 180-312 1-114 (125)
13 KOG0930|consensus 99.8 4.9E-20 1.1E-24 161.3 11.3 149 140-313 227-377 (395)
14 cd01266 PH_Gab Gab (Grb2-assoc 99.8 1.6E-19 3.6E-24 141.9 10.9 94 181-277 1-106 (108)
15 cd01251 PH_centaurin_alpha Cen 99.8 1.5E-19 3.3E-24 140.8 10.5 91 59-155 1-100 (103)
16 cd01235 PH_SETbf Set binding f 99.8 4.2E-19 9.1E-24 137.8 12.0 96 59-154 1-100 (101)
17 cd01260 PH_CNK Connector enhan 99.8 4E-19 8.7E-24 136.8 11.5 91 58-154 1-96 (96)
18 cd01265 PH_PARIS-1 PARIS-1 ple 99.8 3.6E-19 7.8E-24 136.7 10.9 91 59-155 1-94 (95)
19 cd01246 PH_oxysterol_bp Oxyste 99.8 1.2E-18 2.6E-23 132.2 12.5 88 181-278 1-91 (91)
20 cd01244 PH_RasGAP_CG9209 RAS_G 99.8 1.3E-18 2.9E-23 133.5 12.0 90 183-277 5-97 (98)
21 cd01250 PH_centaurin Centaurin 99.8 1.5E-18 3.2E-23 132.6 12.2 92 181-278 1-94 (94)
22 cd01245 PH_RasGAP_CG5898 RAS G 99.8 5.3E-19 1.2E-23 135.3 9.3 91 181-277 1-97 (98)
23 cd01264 PH_melted Melted pleck 99.8 9.3E-19 2E-23 134.5 10.3 94 59-154 2-100 (101)
24 cd01247 PH_GPBP Goodpasture an 99.8 2.8E-18 6.1E-23 130.5 11.5 87 59-153 1-90 (91)
25 cd01241 PH_Akt Akt pleckstrin 99.8 3.6E-18 7.9E-23 132.8 11.7 93 179-278 1-101 (102)
26 cd01252 PH_cytohesin Cytohesin 99.8 5E-18 1.1E-22 137.1 12.7 96 58-156 1-114 (125)
27 cd01238 PH_Tec Tec pleckstrin 99.8 2.8E-18 6.2E-23 134.3 10.8 90 58-153 1-105 (106)
28 cd01236 PH_outspread Outspread 99.8 5.8E-18 1.3E-22 131.2 11.1 89 59-152 1-101 (104)
29 cd01266 PH_Gab Gab (Grb2-assoc 99.7 9E-18 2E-22 132.0 10.4 93 59-153 1-106 (108)
30 PF00169 PH: PH domain; Inter 99.7 5.5E-17 1.2E-21 124.9 12.2 96 179-279 1-103 (104)
31 cd01257 PH_IRS Insulin recepto 99.7 8.8E-17 1.9E-21 124.1 11.4 86 57-152 2-99 (101)
32 cd01245 PH_RasGAP_CG5898 RAS G 99.7 5.6E-17 1.2E-21 124.1 8.9 92 59-153 1-97 (98)
33 cd01246 PH_oxysterol_bp Oxyste 99.7 2.5E-16 5.4E-21 119.4 11.8 88 59-154 1-91 (91)
34 cd01250 PH_centaurin Centaurin 99.7 2.4E-16 5.3E-21 120.2 11.2 90 59-154 1-94 (94)
35 cd01254 PH_PLD Phospholipase D 99.7 3.5E-16 7.6E-21 125.3 11.4 95 181-278 1-121 (121)
36 KOG0703|consensus 99.7 3.9E-18 8.4E-23 151.9 0.0 171 1-188 81-256 (287)
37 PF15413 PH_11: Pleckstrin hom 99.7 1.5E-15 3.2E-20 120.0 12.3 97 181-278 1-112 (112)
38 cd01219 PH_FGD FGD (faciogenit 99.6 1.7E-15 3.8E-20 117.5 11.6 93 179-279 2-99 (101)
39 cd01241 PH_Akt Akt pleckstrin 99.6 2.1E-15 4.6E-20 117.2 11.4 94 58-154 2-101 (102)
40 cd01263 PH_anillin Anillin Ple 99.6 1.6E-15 3.4E-20 120.7 10.6 93 181-277 3-121 (122)
41 KOG0930|consensus 99.6 1.1E-15 2.3E-20 134.2 9.8 100 53-155 256-375 (395)
42 cd01244 PH_RasGAP_CG9209 RAS_G 99.6 2.4E-15 5.3E-20 115.5 10.6 87 61-153 5-97 (98)
43 PF15409 PH_8: Pleckstrin homo 99.6 3.3E-15 7E-20 111.6 10.8 86 183-278 1-88 (89)
44 cd01220 PH_CDEP Chondrocyte-de 99.6 2.1E-14 4.6E-19 110.6 11.8 93 179-279 2-97 (99)
45 PF00169 PH: PH domain; Inter 99.6 3.4E-14 7.5E-19 109.1 13.0 92 58-154 2-102 (104)
46 cd01237 Unc112 Unc-112 pleckst 99.6 2.1E-14 4.6E-19 110.1 9.8 82 194-279 18-103 (106)
47 cd01256 PH_dynamin Dynamin ple 99.5 6.9E-14 1.5E-18 104.3 10.8 101 179-309 1-103 (110)
48 cd01253 PH_beta_spectrin Beta- 99.5 1.1E-13 2.5E-18 107.9 11.0 80 193-278 20-104 (104)
49 KOG1117|consensus 99.5 1.2E-14 2.6E-19 143.4 6.4 219 51-304 81-312 (1186)
50 smart00233 PH Pleckstrin homol 99.5 3.6E-13 7.9E-18 102.1 13.2 96 180-279 2-101 (102)
51 KOG1117|consensus 99.5 2.1E-13 4.6E-18 134.8 13.5 258 3-278 358-709 (1186)
52 PF15409 PH_8: Pleckstrin homo 99.5 2.9E-13 6.3E-18 101.2 9.8 87 61-155 1-89 (89)
53 cd01219 PH_FGD FGD (faciogenit 99.5 7.4E-13 1.6E-17 102.7 11.5 91 58-155 3-99 (101)
54 cd01263 PH_anillin Anillin Ple 99.4 8.3E-13 1.8E-17 105.1 10.4 93 59-153 3-121 (122)
55 cd01230 PH_EFA6 EFA6 Pleckstri 99.4 1.1E-12 2.3E-17 103.9 10.8 93 181-279 2-111 (117)
56 cd01254 PH_PLD Phospholipase D 99.4 2.3E-12 5.1E-17 103.2 10.7 90 59-154 1-121 (121)
57 PF15413 PH_11: Pleckstrin hom 99.4 1.5E-12 3.2E-17 102.9 9.1 93 59-154 1-112 (112)
58 cd00821 PH Pleckstrin homology 99.4 5.7E-12 1.2E-16 94.5 10.2 92 181-278 1-96 (96)
59 cd01253 PH_beta_spectrin Beta- 99.4 6.8E-12 1.5E-16 97.8 10.1 90 59-153 1-103 (104)
60 cd01237 Unc112 Unc-112 pleckst 99.3 7.1E-12 1.5E-16 96.2 9.0 83 70-154 17-102 (106)
61 cd00900 PH-like Pleckstrin hom 99.3 5.4E-11 1.2E-15 89.7 12.5 91 182-278 2-99 (99)
62 cd01256 PH_dynamin Dynamin ple 99.3 2.1E-11 4.5E-16 91.1 9.4 92 58-152 2-102 (110)
63 smart00233 PH Pleckstrin homol 99.3 8E-11 1.7E-15 89.0 12.1 91 58-154 2-100 (102)
64 cd01220 PH_CDEP Chondrocyte-de 99.3 9.7E-11 2.1E-15 90.3 11.6 90 58-155 3-97 (99)
65 cd00821 PH Pleckstrin homology 99.2 6.7E-11 1.5E-15 88.5 9.3 90 59-153 1-95 (96)
66 KOG1090|consensus 99.2 4.8E-12 1E-16 126.8 2.2 100 175-279 1630-1731(1732)
67 cd01218 PH_phafin2 Phafin2 Pl 99.2 2.8E-10 6.2E-15 88.2 10.8 95 177-280 2-99 (104)
68 cd00900 PH-like Pleckstrin hom 99.2 3.8E-10 8.3E-15 85.0 11.4 92 59-153 1-98 (99)
69 cd01239 PH_PKD Protein kinase 99.2 3.4E-10 7.4E-15 87.5 10.9 80 180-263 1-82 (117)
70 cd01234 PH_CADPS CADPS (Ca2+-d 99.1 9.9E-11 2.1E-15 88.2 6.5 96 180-280 3-111 (117)
71 PF15410 PH_9: Pleckstrin homo 99.1 3.8E-10 8.3E-15 90.1 10.3 92 181-278 2-117 (119)
72 cd01230 PH_EFA6 EFA6 Pleckstri 99.1 6.7E-10 1.4E-14 88.0 11.5 92 59-155 2-111 (117)
73 KOG1090|consensus 99.0 6.7E-11 1.4E-15 118.8 2.5 137 11-154 1587-1730(1732)
74 KOG0690|consensus 99.0 3.4E-10 7.5E-15 102.7 4.8 93 177-277 13-114 (516)
75 smart00105 ArfGap Putative GTP 99.0 2.6E-10 5.6E-15 90.1 3.5 50 1-50 59-108 (112)
76 PF14593 PH_3: PH domain; PDB: 99.0 3.3E-09 7.1E-14 82.0 8.7 87 177-278 11-98 (104)
77 KOG0248|consensus 98.9 9E-10 1.9E-14 107.3 5.9 206 55-279 247-465 (936)
78 KOG0705|consensus 98.9 3.5E-10 7.5E-15 108.4 2.9 49 1-50 569-617 (749)
79 cd01242 PH_ROK Rok (Rho- assoc 98.9 1E-08 2.2E-13 78.9 10.2 96 181-279 2-110 (112)
80 cd01243 PH_MRCK MRCK (myotonic 98.9 4.5E-08 9.7E-13 76.5 11.7 95 180-277 3-117 (122)
81 cd01261 PH_SOS Son of Sevenles 98.9 3.3E-08 7.1E-13 77.6 11.1 94 178-278 3-108 (112)
82 cd01234 PH_CADPS CADPS (Ca2+-d 98.8 9.9E-09 2.2E-13 77.5 6.3 94 58-154 3-109 (117)
83 cd01249 PH_oligophrenin Oligop 98.8 3.2E-08 7E-13 75.9 9.2 89 181-276 1-102 (104)
84 cd01259 PH_Apbb1ip Apbb1ip (Am 98.8 2E-08 4.4E-13 77.3 7.8 94 181-276 2-105 (114)
85 cd01259 PH_Apbb1ip Apbb1ip (Am 98.8 2.8E-08 6.1E-13 76.6 7.9 96 59-156 2-109 (114)
86 KOG3531|consensus 98.7 5.1E-09 1.1E-13 104.2 3.6 209 58-280 751-1020(1036)
87 PF01412 ArfGap: Putative GTPa 98.7 3.8E-09 8.2E-14 83.9 2.1 47 1-48 69-115 (116)
88 KOG2059|consensus 98.7 2E-08 4.3E-13 98.6 6.2 96 179-279 565-664 (800)
89 cd01218 PH_phafin2 Phafin2 Pl 98.7 3.6E-07 7.9E-12 70.8 11.4 93 58-158 5-101 (104)
90 KOG4424|consensus 98.6 1.7E-07 3.7E-12 90.4 9.6 222 53-286 268-602 (623)
91 PF15410 PH_9: Pleckstrin homo 98.6 6.9E-07 1.5E-11 71.3 11.2 91 59-154 2-117 (119)
92 cd01262 PH_PDK1 3-Phosphoinosi 98.6 4.2E-07 9.1E-12 67.6 8.8 85 179-277 1-86 (89)
93 cd01239 PH_PKD Protein kinase 98.5 7.1E-07 1.5E-11 69.2 9.5 76 58-139 1-82 (117)
94 KOG0690|consensus 98.5 1.6E-07 3.5E-12 85.6 5.5 96 56-156 14-117 (516)
95 KOG0521|consensus 98.5 5.5E-08 1.2E-12 99.7 2.1 97 177-279 272-368 (785)
96 PF14593 PH_3: PH domain; PDB: 98.4 2E-06 4.3E-11 66.6 9.5 89 57-157 13-101 (104)
97 cd01242 PH_ROK Rok (Rho- assoc 98.4 5.7E-06 1.2E-10 63.8 11.1 91 59-153 2-108 (112)
98 PLN03119 putative ADP-ribosyla 98.4 2.6E-07 5.5E-12 89.2 3.4 50 1-50 76-125 (648)
99 KOG3640|consensus 98.4 6.5E-07 1.4E-11 90.5 6.4 74 177-252 988-1065(1116)
100 cd01261 PH_SOS Son of Sevenles 98.3 7.2E-06 1.6E-10 64.4 10.4 92 58-154 5-108 (112)
101 cd01258 PH_syntrophin Syntroph 98.3 5.4E-06 1.2E-10 64.4 9.2 95 182-278 2-108 (108)
102 PLN02866 phospholipase D 98.3 1.8E-05 3.9E-10 82.3 15.4 132 179-310 182-356 (1068)
103 KOG2059|consensus 98.3 1.2E-06 2.5E-11 86.5 6.3 93 57-155 565-664 (800)
104 PLN03131 hypothetical protein; 98.3 4.3E-07 9.4E-12 88.4 3.2 50 1-50 76-125 (705)
105 cd01240 PH_beta-ARK Beta adren 98.2 8.9E-07 1.9E-11 67.7 3.5 96 178-279 2-98 (116)
106 PTZ00267 NIMA-related protein 98.2 3.1E-06 6.8E-11 83.4 7.9 98 177-279 375-476 (478)
107 cd01243 PH_MRCK MRCK (myotonic 98.2 3.7E-05 7.9E-10 60.3 10.8 94 58-153 3-117 (122)
108 cd01224 PH_Collybistin Collybi 98.1 0.00012 2.5E-09 56.9 12.2 93 179-277 2-105 (109)
109 KOG3751|consensus 98.0 7.1E-06 1.5E-10 78.6 5.8 98 57-156 317-425 (622)
110 PF12814 Mcp5_PH: Meiotic cell 98.0 0.0001 2.3E-09 59.1 11.7 91 183-276 13-118 (123)
111 cd01222 PH_clg Clg (common-sit 98.0 0.00011 2.4E-09 56.2 11.1 89 178-279 3-95 (97)
112 KOG3640|consensus 98.0 9.2E-06 2E-10 82.4 6.4 97 57-155 990-1106(1116)
113 PLN00188 enhanced disease resi 98.0 4.1E-05 8.9E-10 76.8 10.2 100 178-280 3-110 (719)
114 cd01226 PH_exo84 Exocyst compl 97.9 0.00011 2.3E-09 56.3 9.4 95 179-279 2-98 (100)
115 KOG0932|consensus 97.9 4.1E-06 9E-11 80.7 0.8 102 175-279 502-617 (774)
116 KOG1739|consensus 97.8 3.5E-05 7.5E-10 73.3 6.3 91 177-277 22-114 (611)
117 PF12814 Mcp5_PH: Meiotic cell 97.8 0.00043 9.3E-09 55.5 11.4 93 60-153 12-119 (123)
118 PTZ00283 serine/threonine prot 97.8 5.9E-05 1.3E-09 74.7 7.8 98 179-280 373-490 (496)
119 KOG3751|consensus 97.8 7.7E-05 1.7E-09 71.7 7.7 101 177-278 315-423 (622)
120 KOG0521|consensus 97.7 1.8E-05 4E-10 81.5 2.9 104 55-164 272-377 (785)
121 cd01231 PH_Lnk LNK-family Plec 97.6 0.00037 8E-09 52.8 7.9 82 194-278 19-107 (107)
122 KOG0248|consensus 97.6 2.2E-05 4.8E-10 77.3 1.7 93 177-279 247-341 (936)
123 cd01262 PH_PDK1 3-Phosphoinosi 97.6 0.00051 1.1E-08 51.2 8.4 86 58-154 2-87 (89)
124 cd01249 PH_oligophrenin Oligop 97.6 0.00067 1.5E-08 52.2 9.3 91 59-152 1-102 (104)
125 KOG4424|consensus 97.6 0.0001 2.3E-09 71.6 5.5 97 175-279 268-369 (623)
126 PLN02866 phospholipase D 97.5 0.0006 1.3E-08 71.3 11.0 98 56-156 181-308 (1068)
127 cd01221 PH_ephexin Ephexin Ple 97.5 0.0023 5E-08 51.1 11.8 95 179-275 3-118 (125)
128 cd01240 PH_beta-ARK Beta adren 97.5 0.0001 2.2E-09 56.6 3.6 94 57-155 3-98 (116)
129 PLN00188 enhanced disease resi 97.5 0.00057 1.2E-08 68.9 9.8 100 56-157 3-111 (719)
130 PTZ00267 NIMA-related protein 97.5 0.00033 7.2E-09 69.0 8.1 92 57-154 377-475 (478)
131 KOG3549|consensus 97.5 0.00068 1.5E-08 62.3 9.3 133 135-279 240-386 (505)
132 PF15406 PH_6: Pleckstrin homo 97.5 0.00035 7.5E-09 53.7 6.1 63 204-276 47-110 (112)
133 cd01228 PH_BCR-related BCR (br 97.4 0.00078 1.7E-08 50.6 7.2 83 178-277 2-92 (96)
134 cd01222 PH_clg Clg (common-sit 97.3 0.0052 1.1E-07 47.0 10.7 89 58-155 5-95 (97)
135 cd01221 PH_ephexin Ephexin Ple 97.3 0.0021 4.5E-08 51.4 8.7 78 73-152 27-119 (125)
136 KOG3723|consensus 97.1 0.00018 3.8E-09 69.9 1.1 97 180-279 736-836 (851)
137 cd01224 PH_Collybistin Collybi 97.1 0.014 3E-07 45.4 11.3 93 58-154 3-106 (109)
138 KOG3543|consensus 97.0 0.00016 3.6E-09 70.8 0.2 98 178-280 463-566 (1218)
139 KOG3531|consensus 97.0 0.00017 3.7E-09 72.7 -0.1 91 58-154 925-1018(1036)
140 cd01225 PH_Cool_Pix Cool (clon 97.0 0.0069 1.5E-07 47.0 8.6 78 194-277 26-107 (111)
141 PF15404 PH_4: Pleckstrin homo 96.8 0.004 8.7E-08 53.2 6.9 124 181-309 1-183 (185)
142 PF15404 PH_4: Pleckstrin homo 96.8 0.034 7.4E-07 47.5 12.1 32 59-92 1-32 (185)
143 KOG3551|consensus 96.7 0.0082 1.8E-07 56.1 8.5 140 131-278 247-400 (506)
144 PF15408 PH_7: Pleckstrin homo 96.7 0.0016 3.5E-08 47.7 2.9 92 182-277 1-95 (104)
145 cd01223 PH_Vav Vav pleckstrin 96.6 0.015 3.3E-07 45.7 8.0 93 181-278 6-110 (116)
146 KOG3723|consensus 96.6 0.00086 1.9E-08 65.3 1.2 98 58-157 736-838 (851)
147 KOG4236|consensus 96.5 0.0037 8.1E-08 61.0 5.0 98 177-279 411-523 (888)
148 KOG0818|consensus 96.5 0.0013 2.9E-08 63.0 1.7 45 4-48 67-118 (669)
149 KOG1739|consensus 96.4 0.0041 8.8E-08 59.6 4.8 89 58-155 25-116 (611)
150 KOG1451|consensus 96.3 0.011 2.4E-07 58.0 7.3 96 176-278 262-366 (812)
151 cd01258 PH_syntrophin Syntroph 96.2 0.022 4.9E-07 44.3 7.1 87 61-153 3-107 (108)
152 PTZ00283 serine/threonine prot 96.2 0.012 2.5E-07 58.5 6.9 91 58-154 374-488 (496)
153 cd01225 PH_Cool_Pix Cool (clon 96.2 0.033 7.2E-07 43.3 7.8 75 73-153 28-107 (111)
154 cd01228 PH_BCR-related BCR (br 96.1 0.039 8.5E-07 41.6 7.8 81 58-153 4-92 (96)
155 cd01226 PH_exo84 Exocyst compl 96.1 0.089 1.9E-06 40.3 9.5 90 60-155 5-98 (100)
156 cd01232 PH_TRIO Trio pleckstri 95.8 0.073 1.6E-06 42.0 8.4 75 195-277 23-110 (114)
157 cd01248 PH_PLC Phospholipase C 95.8 0.093 2E-06 41.3 9.1 94 59-153 7-114 (115)
158 cd01248 PH_PLC Phospholipase C 95.8 0.094 2E-06 41.3 9.1 76 197-276 22-113 (115)
159 KOG3543|consensus 95.7 0.0032 6.9E-08 62.0 0.3 97 56-154 463-564 (1218)
160 cd01227 PH_Dbs Dbs (DBL's big 95.3 0.19 4.1E-06 40.7 9.4 75 197-279 30-115 (133)
161 COG5347 GTPase-activating prot 95.1 0.018 4E-07 53.4 3.2 50 1-50 76-126 (319)
162 KOG1737|consensus 95.1 0.017 3.7E-07 59.4 3.1 88 179-278 77-167 (799)
163 KOG1737|consensus 95.0 0.014 3.1E-07 59.9 2.4 94 56-159 76-172 (799)
164 PF15406 PH_6: Pleckstrin homo 94.9 0.086 1.9E-06 40.7 6.0 61 84-152 48-110 (112)
165 cd01232 PH_TRIO Trio pleckstri 94.2 0.49 1.1E-05 37.3 8.9 77 74-154 25-111 (114)
166 KOG0932|consensus 94.2 0.024 5.1E-07 55.5 1.6 93 56-154 505-616 (774)
167 KOG4807|consensus 93.7 0.00091 2E-08 62.2 -8.4 79 194-279 33-114 (593)
168 cd01231 PH_Lnk LNK-family Plec 93.7 0.29 6.4E-06 37.3 6.4 80 71-153 19-106 (107)
169 PF15408 PH_7: Pleckstrin homo 93.0 0.096 2.1E-06 38.6 2.8 89 60-153 1-95 (104)
170 PF15405 PH_5: Pleckstrin homo 91.9 1.1 2.3E-05 36.5 7.9 33 180-213 2-34 (135)
171 cd01255 PH_TIAM TIAM Pleckstri 91.6 1.6 3.5E-05 35.5 8.4 28 286-313 129-156 (160)
172 KOG1738|consensus 91.2 0.036 7.8E-07 55.0 -1.6 63 56-120 561-627 (638)
173 PF15411 PH_10: Pleckstrin hom 90.6 2.3 4.9E-05 33.6 8.4 78 71-151 19-116 (116)
174 KOG1451|consensus 90.0 0.9 2E-05 45.1 6.7 97 55-154 263-366 (812)
175 cd01223 PH_Vav Vav pleckstrin 88.8 5.4 0.00012 31.5 9.1 92 60-155 7-111 (116)
176 KOG0705|consensus 88.6 0.41 8.9E-06 47.3 3.3 38 246-283 445-483 (749)
177 KOG1738|consensus 88.6 0.063 1.4E-06 53.3 -2.2 47 180-226 563-611 (638)
178 cd01227 PH_Dbs Dbs (DBL's big 87.0 6.5 0.00014 31.8 8.9 77 74-156 30-116 (133)
179 KOG0592|consensus 86.5 0.51 1.1E-05 46.6 2.6 85 179-278 451-536 (604)
180 PF15411 PH_10: Pleckstrin hom 85.6 5.6 0.00012 31.4 7.7 75 194-275 19-116 (116)
181 KOG2070|consensus 85.4 1.4 3.1E-05 42.9 4.9 75 196-277 325-404 (661)
182 PF15405 PH_5: Pleckstrin homo 84.3 13 0.00028 30.1 9.6 94 59-154 3-134 (135)
183 KOG1170|consensus 84.2 0.059 1.3E-06 54.9 -5.1 92 180-280 3-95 (1099)
184 KOG0517|consensus 83.9 0.052 1.1E-06 59.7 -5.8 128 180-319 2300-2441(2473)
185 PF08458 PH_2: Plant pleckstri 83.4 10 0.00022 29.5 8.1 32 245-276 69-100 (110)
186 KOG3523|consensus 82.1 4.4 9.5E-05 40.6 6.8 82 195-277 498-592 (695)
187 KOG4807|consensus 80.4 0.028 6E-07 52.6 -8.3 78 70-154 32-113 (593)
188 KOG4236|consensus 77.4 5.5 0.00012 39.7 5.8 92 58-156 414-524 (888)
189 KOG3551|consensus 71.9 5.3 0.00012 37.9 4.1 95 58-154 293-400 (506)
190 PF08458 PH_2: Plant pleckstri 68.2 6.9 0.00015 30.5 3.4 33 281-313 73-105 (110)
191 KOG4047|consensus 62.0 4.5 9.9E-05 39.1 1.7 97 177-278 6-116 (429)
192 cd05135 RasGAP_RASAL Ras GTPas 61.2 2.4 5.2E-05 39.9 -0.4 28 177-204 301-333 (333)
193 cd05394 RasGAP_RASA2 RASA2 (or 60.5 2.1 4.5E-05 39.8 -0.9 29 53-81 279-312 (313)
194 cd05394 RasGAP_RASA2 RASA2 (or 60.5 1.8 3.8E-05 40.3 -1.4 30 176-205 280-313 (313)
195 KOG1264|consensus 58.9 15 0.00033 38.3 4.8 36 244-279 872-910 (1267)
196 KOG3523|consensus 58.9 13 0.00029 37.3 4.3 94 57-152 469-591 (695)
197 cd05134 RasGAP_RASA3 RASA3 (or 57.7 2.7 5.9E-05 39.0 -0.6 29 177-205 278-310 (310)
198 cd05128 RasGAP_GAP1_like The G 56.5 3.1 6.8E-05 38.8 -0.4 26 56-81 285-315 (315)
199 KOG3727|consensus 54.1 2.5 5.3E-05 41.9 -1.6 80 194-279 373-458 (664)
200 KOG0702|consensus 53.7 12 0.00026 36.6 3.0 48 2-50 82-130 (524)
201 cd05128 RasGAP_GAP1_like The G 53.6 3.3 7.2E-05 38.6 -0.8 28 177-204 284-315 (315)
202 KOG4407|consensus 53.5 0.89 1.9E-05 49.0 -4.9 108 170-279 914-1041(1973)
203 cd05134 RasGAP_RASA3 RASA3 (or 52.7 3.9 8.5E-05 38.0 -0.4 26 56-81 279-309 (310)
204 PF02829 3H: 3H domain; Inter 49.0 81 0.0018 24.1 6.3 50 260-309 41-93 (98)
205 cd05135 RasGAP_RASAL Ras GTPas 44.0 6.8 0.00015 36.9 -0.3 26 56-81 302-333 (333)
206 KOG2070|consensus 43.5 32 0.0007 33.9 4.1 74 74-153 326-404 (661)
207 KOG4471|consensus 43.4 69 0.0015 32.5 6.4 76 201-279 59-136 (717)
208 PF08671 SinI: Anti-repressor 42.8 9.5 0.00021 22.4 0.3 19 301-319 3-21 (30)
209 KOG1264|consensus 41.5 36 0.00078 35.7 4.3 35 178-213 474-508 (1267)
210 PLN02958 diacylglycerol kinase 41.3 1.1E+02 0.0024 30.4 7.6 56 255-311 81-139 (481)
211 PF06017 Myosin_TH1: Myosin ta 39.6 2.1E+02 0.0046 24.5 8.4 87 178-274 49-141 (199)
212 PF04714 BCL_N: BCL7, N-termin 35.4 27 0.00059 23.1 1.6 19 194-212 28-46 (52)
213 KOG0976|consensus 33.4 33 0.00071 35.8 2.6 123 131-279 788-919 (1265)
214 KOG3727|consensus 32.9 11 0.00024 37.5 -0.7 81 71-154 373-457 (664)
215 KOG3508|consensus 32.1 0.54 1.2E-05 49.2 -10.3 119 34-155 337-460 (932)
216 KOG2996|consensus 30.9 1.6E+02 0.0036 29.8 6.8 126 180-310 407-547 (865)
217 KOG3520|consensus 30.2 78 0.0017 34.6 4.8 56 98-156 667-722 (1167)
218 PF14470 bPH_3: Bacterial PH d 29.1 2.2E+02 0.0049 20.5 9.4 76 195-277 20-96 (96)
219 KOG3549|consensus 29.1 2.7E+02 0.0059 26.4 7.5 114 31-157 247-388 (505)
220 PF15277 Sec3-PIP2_bind: Exocy 28.5 1.2E+02 0.0027 22.6 4.4 31 246-277 56-86 (91)
221 PF12989 DUF3873: Domain of un 23.2 24 0.00052 24.9 -0.3 19 22-40 50-68 (69)
222 cd01255 PH_TIAM TIAM Pleckstri 22.5 98 0.0021 25.4 3.0 54 222-280 94-155 (160)
223 PF14261 DUF4351: Domain of un 22.4 95 0.0021 21.2 2.6 28 261-304 32-59 (59)
224 PF00377 Prion: Prion/Doppel a 22.0 58 0.0013 25.6 1.6 37 3-39 7-46 (117)
225 PLN03114 ADP-ribosylation fact 20.4 1.3E+02 0.0028 28.7 3.7 50 1-50 78-129 (395)
226 KOG1329|consensus 20.1 82 0.0018 33.4 2.7 93 180-279 176-269 (887)
No 1
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.93 E-value=1e-25 Score=175.57 Aligned_cols=98 Identities=49% Similarity=0.964 Sum_probs=75.2
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCC-CCCCCceEEEEeCCeEEE
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG-AKDQGFTFTLKTPQRWYQ 259 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~-~~~~~~~F~i~t~~r~~~ 259 (321)
|+|||.|+|+...+.||+|||+|+++.|+||+++.+..|+|.|+|+.+..+++|....+.+ .....++|.|.|++|+|+
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i~t~~Rty~ 80 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLDDRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTLVTPERKFL 80 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEeCCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEEEeCCeEEE
Confidence 5899999998744899999999999999999999999999999999887778887654433 222345999999999999
Q ss_pred EEcCCHHHHHHHHHHHhhc
Q psy9639 260 FSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 260 f~A~s~~e~~~Wv~aL~~a 278 (321)
|+|+|++||++||+||+++
T Consensus 81 l~a~s~~e~~~Wi~ai~~v 99 (103)
T cd01251 81 FACETEQDRREWIAAFQNV 99 (103)
T ss_pred EECCCHHHHHHHHHHHHHH
Confidence 4444444444444444443
No 2
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.88 E-value=2.5e-22 Score=155.77 Aligned_cols=95 Identities=21% Similarity=0.264 Sum_probs=78.0
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC-CCCCCCceEEEEeCCeE
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-GAKDQGFTFTLKTPQRW 257 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~~~~~~~~F~i~t~~r~ 257 (321)
++|+|||.|+|+.. +.|++|||+|+++.|+||+++.+..|.|.|+|.. +.|...... ...+++++|.|.+++|+
T Consensus 2 v~k~G~L~Kkg~~~-k~WkkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~----~~v~~~~~~~~~~~~~~~F~I~t~~rt 76 (100)
T cd01233 2 VSKKGYLNFPEETN-SGWTRRFVVVRRPYLHIYRSDKDPVERGVINLST----ARVEHSEDQAAMVKGPNTFAVCTKHRG 76 (100)
T ss_pred cceeEEEEeeCCCC-CCcEEEEEEEECCEEEEEccCCCccEeeEEEecc----cEEEEccchhhhcCCCcEEEEECCCCE
Confidence 57899999999987 8999999999999999999999999999999964 344432211 11235789999999999
Q ss_pred EEEEcCCHHHHHHHHHHHhhc
Q psy9639 258 YQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 258 ~~f~A~s~~e~~~Wv~aL~~a 278 (321)
|+|+|+|++|+++||+||+..
T Consensus 77 ~~~~A~s~~e~~~Wi~ai~~~ 97 (100)
T cd01233 77 YLFQALSDKEMIDWLYALNPL 97 (100)
T ss_pred EEEEcCCHHHHHHHHHHhhhh
Confidence 998888888888888888664
No 3
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.87 E-value=1.1e-21 Score=150.73 Aligned_cols=96 Identities=19% Similarity=0.316 Sum_probs=75.2
Q ss_pred eEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCCCCcc-eeEEcccccCceEEecCCC-CCCCCCCceEEEEeCCe
Q psy9639 181 REGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAYPK-GEIFLGHCSDGYTVRLGVP-PGAKDQGFTFTLKTPQR 256 (321)
Q Consensus 181 k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~-g~i~L~~~~~~~~V~~~~~-~~~~~~~~~F~i~t~~r 256 (321)
.+|||.|+|+. ..+.|++|||+|+++.|+||++.....|. |+|+|+.+. +|..+.. ......+++|+|.||+|
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~~~~L~y~K~~~~~~~~~g~IdL~~~~---sVk~~~~~~~~~~~~~~Fei~tp~r 78 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDPDDCSIDLSKIR---SVKAVAKKRRDRSLPKAFEIFTADK 78 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEeCCEEEEEeccCccCCCCceEEcccce---EEeeccccccccccCcEEEEEcCCc
Confidence 48999999993 34899999999999999999998665565 999998763 4554321 11123469999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 257 WYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 257 ~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|+|+|+|++++++||++|+.|+
T Consensus 79 t~~l~A~se~e~e~WI~~i~~a~ 101 (101)
T cd01264 79 TYILKAKDEKNAEEWLQCLNIAV 101 (101)
T ss_pred eEEEEeCCHHHHHHHHHHHHhhC
Confidence 99988888888888888887663
No 4
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.87 E-value=1.2e-21 Score=150.88 Aligned_cols=92 Identities=25% Similarity=0.566 Sum_probs=77.3
Q ss_pred ceEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-
Q psy9639 180 GREGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ- 255 (321)
Q Consensus 180 ~k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~- 255 (321)
+++|||.|++... .+.|++|||+|+++.|+||+++.+..|.|.|+|.. +.|.... . ..++++|.|.+++
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~----~~v~~~~-~--~~k~~~F~I~~~~~ 73 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLKGTTLYWYRSKQDEKAEGLIFLSG----FTIESAK-E--VKKKYAFKVCHPVY 73 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEECCEEEEECCCCCCccceEEEccC----CEEEEch-h--cCCceEEEECCCCC
Confidence 3689999997653 24899999999999999999999999999999954 5555432 1 2367999999998
Q ss_pred eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 256 RWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 256 r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
|+|+|+|+|++++++||.||++|
T Consensus 74 ~~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 74 KSFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred cEEEEEeCCHHHHHHHHHHHHhC
Confidence 99999999999999999999875
No 5
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.87 E-value=1.2e-21 Score=150.41 Aligned_cols=89 Identities=27% Similarity=0.426 Sum_probs=72.9
Q ss_pred EEEEEEeCCCC-CCCcceEEEEEeC--CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639 182 EGWLWKTGPKN-ADAYRKRWFTLDY--RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY 258 (321)
Q Consensus 182 ~G~L~K~g~~~-~~~WkkRwfvL~~--~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~ 258 (321)
+|||.|+|+++ .++|++|||||++ ..|+||+++.+..|+|.|+|..+ .+.. .+. ..+++|.|.|++|+|
T Consensus 2 ~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~----~~~~-~~~---~~~~~F~i~t~~r~y 73 (95)
T cd01265 2 CGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGA----AFTY-DPR---EEKGRFEIHSNNEVI 73 (95)
T ss_pred cccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCcc----EEEc-CCC---CCCCEEEEEcCCcEE
Confidence 79999998752 4899999999984 57999999999999999999653 2322 111 236799999999999
Q ss_pred EEEcCCHHHHHHHHHHHhhc
Q psy9639 259 QFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 259 ~f~A~s~~e~~~Wv~aL~~a 278 (321)
+|+|+|++||++||+||+.+
T Consensus 74 ~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 74 ALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred EEECCCHHHHHHHHHHHHhh
Confidence 99999988888888888875
No 6
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.87 E-value=1.8e-21 Score=152.44 Aligned_cols=95 Identities=24% Similarity=0.284 Sum_probs=72.6
Q ss_pred ceEEEEEEeCCCC----CCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCC----CCCCceE
Q psy9639 180 GREGWLWKTGPKN----ADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGA----KDQGFTF 249 (321)
Q Consensus 180 ~k~G~L~K~g~~~----~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~----~~~~~~F 249 (321)
+++|+|+|++... .++||+|||+|+++.|+||+++.+ ..++|.|+|..+.. |..+.+... ....++|
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~~~~L~Yyk~~~~~~~~~kG~I~L~~~~~---ve~~~~~~~~~~~~~~~~~F 77 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLTKSKLSYYEGDFEKRGSKKGSIDLSKIKC---VETVKPEKNPPIPERFKYPF 77 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEcCCEEEEECCCcccccCcceeEECCcceE---EEEecCCcCcccccccCccE
Confidence 5799999997443 249999999999999999999876 37999999987533 332221111 1246899
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 250 TLKTPQRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 250 ~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
+|++++|+|++.|+|++|+++||+||++
T Consensus 78 ~i~t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 78 QVVHDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred EEEeCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 9999999999777777777777777765
No 7
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.86 E-value=5.2e-21 Score=148.55 Aligned_cols=95 Identities=31% Similarity=0.505 Sum_probs=75.5
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC----CCCCCCceEEEEeC
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP----GAKDQGFTFTLKTP 254 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~----~~~~~~~~F~i~t~ 254 (321)
++|||.|+|... +.|++|||+|+ ++.|.||+++.+..|+|.|+|..+. .|....+. ......++|.|.++
T Consensus 1 ~~G~L~K~g~~~-k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~---~v~~~~~~~~~~~~~~~~~~f~i~t~ 76 (101)
T cd01235 1 CEGYLYKRGALL-KGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEVK---SVNLAQPGMGAPKHTSRKGFFDLKTS 76 (101)
T ss_pred CeEEEEEcCCCC-CCccceEEEEECCCCEEEEecCCCCCccceEEEcceeE---EEeecCCCCCCCCCCCCceEEEEEeC
Confidence 489999999887 89999999999 4599999999999999999998652 33321111 11124578999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 255 QRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 255 ~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|+|+|.|+|++|+++||.||+++|
T Consensus 77 ~r~~~~~a~s~~e~~~Wi~ai~~~i 101 (101)
T cd01235 77 KRTYNFLAENINEAQRWKEKIQQCI 101 (101)
T ss_pred CceEEEECCCHHHHHHHHHHHHhhC
Confidence 9999988888888888888888765
No 8
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.85 E-value=7.7e-21 Score=147.27 Aligned_cols=91 Identities=22% Similarity=0.417 Sum_probs=70.9
Q ss_pred eEEEEEEeCCC--------CCCCcceEEEEEe-CCeeEeeeCC-CCCCcceeEEcccccCceEEecCCCCCCCCCCceEE
Q psy9639 181 REGWLWKTGPK--------NADAYRKRWFTLD-YRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFT 250 (321)
Q Consensus 181 k~G~L~K~g~~--------~~~~WkkRwfvL~-~~~L~Yyk~~-~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~ 250 (321)
++|||.|.++. ..+.||||||||+ ++.|+||++. .+..|+|+|+|..+ ++|..+. +..+++++|.
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~~~~~L~y~~d~~~~~~p~G~IdL~~~---~~V~~~~--~~~~~~~~f~ 75 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILYDHGLLTYALDEMPTTLPQGTIDMNQC---TDVVDAE--ARTGQKFSIC 75 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEeCCCEEEEeeCCCCCcccceEEEccce---EEEeecc--cccCCccEEE
Confidence 47999998764 2479999999998 5677787665 57789999999754 5555432 2234578999
Q ss_pred EEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639 251 LKTPQRWYQFSALSAPDRDQWIQAVQ 276 (321)
Q Consensus 251 i~t~~r~~~f~A~s~~e~~~Wv~aL~ 276 (321)
|+||+|+|+|.|+|++|+++||.+|+
T Consensus 76 I~tp~R~f~l~Aete~E~~~Wi~~l~ 101 (104)
T cd01236 76 ILTPDKEHFIKAETKEEISWWLNMLM 101 (104)
T ss_pred EECCCceEEEEeCCHHHHHHHHHHHH
Confidence 99999999988888888888888775
No 9
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.85 E-value=1.6e-20 Score=142.80 Aligned_cols=87 Identities=20% Similarity=0.266 Sum_probs=71.9
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eE
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RW 257 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~ 257 (321)
++|||.|.|... ++|++|||||+++.|+||+++.+ ..|+|.|+|.. +.+... . ..++.|.|.+++ |+
T Consensus 1 ~~G~L~K~~~~~-k~Wk~RwFvL~~g~L~Yyk~~~~~~~~~~G~I~L~~----~~i~~~---~--~~~~~F~i~~~~~r~ 70 (91)
T cd01247 1 TNGVLSKWTNYI-NGWQDRYFVLKEGNLSYYKSEAEKSHGCRGSIFLKK----AIIAAH---E--FDENRFDISVNENVV 70 (91)
T ss_pred CceEEEEecccc-CCCceEEEEEECCEEEEEecCccCcCCCcEEEECcc----cEEEcC---C--CCCCEEEEEeCCCeE
Confidence 379999999988 89999999999999999999876 34799999965 334321 1 245789997665 99
Q ss_pred EEEEcCCHHHHHHHHHHHhh
Q psy9639 258 YQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 258 ~~f~A~s~~e~~~Wv~aL~~ 277 (321)
|+|.|+|++|+++||+||+.
T Consensus 71 ~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 71 WYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred EEEEeCCHHHHHHHHHHHhh
Confidence 99999999999999999875
No 10
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.84 E-value=2.2e-20 Score=144.23 Aligned_cols=89 Identities=26% Similarity=0.454 Sum_probs=71.4
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCC------eeEeeeCCCC-----CCcceeEEcccccCceEEecCCCCCCCCCC
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYR------KLMYHEEPLS-----AYPKGEIFLGHCSDGYTVRLGVPPGAKDQG 246 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~------~L~Yyk~~~~-----~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~ 246 (321)
+++++|||.|+ +.|+||||||+++ .|.||+++.. ..|+|+|+|..+. .|... ++ ..++
T Consensus 1 ~v~k~GyL~K~-----K~~kkRwFVLr~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~---~v~~~-~d--~k~~ 69 (101)
T cd01257 1 DVRKSGYLRKQ-----KSMHKRFFVLRAESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCF---NINKR-AD--AKHR 69 (101)
T ss_pred CccEEEEEeEe-----cCcEeEEEEEecCCCCCCceEEEECChhhccccCCCceEEEEccceE---EEeec-cc--cccC
Confidence 47899999997 6899999999977 8999999864 6799999998762 34321 11 2346
Q ss_pred ceEEEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 247 FTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 247 ~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
|+|.|.|++|+|+|.|+|++|+++|+++|..
T Consensus 70 ~~f~i~t~dr~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 70 HLIALYTRDEYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred eEEEEEeCCceEEEEeCCHHHHHHHHHHHhh
Confidence 9999999999999888888888888887753
No 11
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=99.83 E-value=8.1e-20 Score=141.67 Aligned_cols=92 Identities=12% Similarity=0.246 Sum_probs=78.7
Q ss_pred cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCC---CCCCceeEEEEeecCceE
Q psy9639 57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSK---IEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~---~~~~~~~~i~~~~~~~~R 132 (321)
..++|||.|+|+..+.|++|||||. ++.|.||++ ++..|+|.|+|+++.+...++. .+.+++|.| .++.|
T Consensus 2 v~k~G~L~Kkg~~~k~WkkRwfvL~--~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~~~~~~~~~~F~I----~t~~r 75 (100)
T cd01233 2 VSKKGYLNFPEETNSGWTRRFVVVR--RPYLHIYRSDKDPVERGVINLSTARVEHSEDQAAMVKGPNTFAV----CTKHR 75 (100)
T ss_pred cceeEEEEeeCCCCCCcEEEEEEEE--CCEEEEEccCCCccEeeEEEecccEEEEccchhhhcCCCcEEEE----ECCCC
Confidence 4689999999999999999999999 899999999 8899999999998765544332 346777665 45679
Q ss_pred EEEEEeCChHHHHHHHHHHHhh
Q psy9639 133 HIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~a 154 (321)
+|+|+|+|++++.+|+.+|+++
T Consensus 76 t~~~~A~s~~e~~~Wi~ai~~~ 97 (100)
T cd01233 76 GYLFQALSDKEMIDWLYALNPL 97 (100)
T ss_pred EEEEEcCCHHHHHHHHHHhhhh
Confidence 9999999999999999999865
No 12
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.83 E-value=9.1e-20 Score=147.22 Aligned_cols=114 Identities=27% Similarity=0.485 Sum_probs=76.9
Q ss_pred ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEE
Q psy9639 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQ 259 (321)
Q Consensus 180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~ 259 (321)
+++|||.|+|+.. +.|++|||+|.++.|+||+++.+..|.|.|+|.. +.|.... . ..+++||+|.++++.-.
T Consensus 1 ~k~G~L~K~~~~~-~~WkkRwfvL~~~~L~yyk~~~~~~~~g~I~L~~----~~v~~~~-~--~~~~~~F~i~~~~~~~~ 72 (125)
T cd01252 1 DREGWLLKQGGRV-KTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLEN----VSIREVE-D--PSKPFCFELFSPSDKQQ 72 (125)
T ss_pred CcEEEEEEeCCCC-CCeEeEEEEEECCEEEEEcCCCCCCceEEEECCC----cEEEEcc-c--CCCCeeEEEECCccccc
Confidence 4789999999887 8999999999999999999999999999999964 4555432 1 24678999998754111
Q ss_pred EEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHHhhc
Q psy9639 260 FSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLD 312 (321)
Q Consensus 260 f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~ 312 (321)
+.+.. ...-+..+.++++.|.|+|+|++|+++|++||+.++.
T Consensus 73 i~~~~-----------~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 73 IKACK-----------TESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred ccccc-----------ccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 10000 0000122334455555666666666666666666654
No 13
>KOG0930|consensus
Probab=99.82 E-value=4.9e-20 Score=161.26 Aligned_cols=149 Identities=26% Similarity=0.482 Sum_probs=113.8
Q ss_pred ChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCc
Q psy9639 140 ESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYP 219 (321)
Q Consensus 140 s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~ 219 (321)
.++.+..-+++|+...+. +|...++++...+ -+..++|||.|.|+...+.||||||+|++++|+||.-.+|.+|
T Consensus 227 pee~LrnlyeSi~~epFk-----IPeddgndlthtf-fnpdREGWLlKlgg~rvktWKrRWFiLtdNCLYYFe~tTDKEP 300 (395)
T KOG0930|consen 227 PEELLRNLYESIKNEPFK-----IPEDDGNDLTHTF-FNPDREGWLLKLGGNRVKTWKRRWFILTDNCLYYFEYTTDKEP 300 (395)
T ss_pred cHHHHHHHHHHhcCCCCC-----CCcccCCcchhhc-cCccccceeeeecCCcccchhheeEEeecceeeeeeeccCCCC
Confidence 455667777777755443 5766666643322 2457899999999966699999999999999999999999999
Q ss_pred ceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc-ccccccCceEEEEecCCH
Q psy9639 220 KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF-TFTLKTPQRWYQFSALSA 297 (321)
Q Consensus 220 ~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai-~~~l~~~~~~~~l~a~s~ 297 (321)
+|.|+|.+ .+|++++. ..+++||+|..|+ +-=. |+|.++.. +-.+...|.+|.++|.|.
T Consensus 301 rGIIpLeN----lsir~Ved---P~kP~cfEly~ps~~gq~------------IKACKTe~DGRvVEG~H~vYrIsA~~~ 361 (395)
T KOG0930|consen 301 RGIIPLEN----LSIREVED---PKKPNCFELYIPSNKGQV------------IKACKTEADGRVVEGNHSVYRISAPTP 361 (395)
T ss_pred Ccceeccc----cceeeccC---CCCCCeEEEecCCCCcCe------------eeeecccCCceeEeccceEEEeeCCCH
Confidence 99999965 45665432 2478999999763 2222 23333333 577889999999999999
Q ss_pred HHHHHHHHHHHHhhcC
Q psy9639 298 PDRDQWIQAVQTVLDT 313 (321)
Q Consensus 298 ~e~~~Wi~al~~~i~~ 313 (321)
+|+++||++|+++|++
T Consensus 362 Ee~~~Wi~sI~a~is~ 377 (395)
T KOG0930|consen 362 EEKDEWIKSIKAAISR 377 (395)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999999985
No 14
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.81 E-value=1.6e-19 Score=141.95 Aligned_cols=94 Identities=26% Similarity=0.385 Sum_probs=72.1
Q ss_pred eEEEEEEeCCCC---CCCcceEEEEEeCCe-------eEeeeCCCCCCcceeEEcccccCceEEecCCC--CCCCCCCce
Q psy9639 181 REGWLWKTGPKN---ADAYRKRWFTLDYRK-------LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP--PGAKDQGFT 248 (321)
Q Consensus 181 k~G~L~K~g~~~---~~~WkkRwfvL~~~~-------L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~--~~~~~~~~~ 248 (321)
.+|||.|+++.. .+.|++|||+|+++. |.||+++.+..|+|.|+|..+. .|..... .......+.
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~---~v~~~~~~~~~~~~~~~~ 77 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLHCGDRERNLFALEYYKTSRKFKLEFVIDLESCS---QVDPGLLCTAGNCIFGYG 77 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEeccccCCCcceEEEECCCCCCccceEEECCccE---EEcccccccccCcccceE
Confidence 379999998843 259999999999876 5999999999999999997642 2221110 111123578
Q ss_pred EEEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 249 FTLKTPQRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 249 F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
|.|.++.|+|+|.|+|++||++||.+|++
T Consensus 78 f~i~t~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 78 FDIETIVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred EEEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence 99999999999888888888888888865
No 15
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=99.81 E-value=1.5e-19 Score=140.78 Aligned_cols=91 Identities=20% Similarity=0.337 Sum_probs=72.6
Q ss_pred eeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEE--Ee----ccCCCC-CCceeEEEEeecC
Q psy9639 59 MDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNV--VI----APSKIE-HPHSLQLTFMKDG 129 (321)
Q Consensus 59 ~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~--~~----~~~~~~-~~~~~~i~~~~~~ 129 (321)
|+|||.|+|+. .++|++|||||. ++.|.||++ .+..|+|.|+|..+.. .+ .+...+ +.++|+| .+
T Consensus 1 KeG~L~K~g~~~~k~wkkRwFvL~--~~~L~Yyk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~~~~~F~i----~t 74 (103)
T cd01251 1 KEGFMEKTGPKHTEGFKKRWFTLD--DRRLMYFKDPLDAFAKGEVFLGSQEDGYEVREGLPPGTQGNHWYGVTL----VT 74 (103)
T ss_pred CceeEEecCCCCCCCceeEEEEEe--CCEEEEECCCCCcCcCcEEEeeccccceeEeccCCccccccccceEEE----Ee
Confidence 68999999987 589999999999 999999999 8999999999986531 11 111112 2235554 45
Q ss_pred ceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 130 STRHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 130 ~~R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
+.|+|+|.|+|++|+.+|+++|+.+.
T Consensus 75 ~~Rty~l~a~s~~e~~~Wi~ai~~v~ 100 (103)
T cd01251 75 PERKFLFACETEQDRREWIAAFQNVL 100 (103)
T ss_pred CCeEEEEECCCHHHHHHHHHHHHHHh
Confidence 68999999999999999999998763
No 16
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=99.81 E-value=4.2e-19 Score=137.79 Aligned_cols=96 Identities=26% Similarity=0.433 Sum_probs=74.1
Q ss_pred eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec-cCCCCCC-c-eeEEEEeecCceEEE
Q psy9639 59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA-PSKIEHP-H-SLQLTFMKDGSTRHI 134 (321)
Q Consensus 59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~-~~~~~~~-~-~~~i~~~~~~~~R~~ 134 (321)
.+|||.|+|+..++|++|||||...++.|.||++ .+..|+|+|+|+.+..+.. ....+.+ + .-...|.+.++.|+|
T Consensus 1 ~~G~L~K~g~~~k~WkkRwFvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~v~~~~~~~~~~~~~~~~~~f~i~t~~r~~ 80 (101)
T cd01235 1 CEGYLYKRGALLKGWKPRWFVLDPDKHQLRYYDDFEDTAEKGCIDLAEVKSVNLAQPGMGAPKHTSRKGFFDLKTSKRTY 80 (101)
T ss_pred CeEEEEEcCCCCCCccceEEEEECCCCEEEEecCCCCCccceEEEcceeEEEeecCCCCCCCCCCCCceEEEEEeCCceE
Confidence 4899999999999999999999844569999999 8899999999999865432 1111111 0 111224445677999
Q ss_pred EEEeCChHHHHHHHHHHHhh
Q psy9639 135 YVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 135 ~l~a~s~~e~~~W~~aLr~a 154 (321)
+|+|+|++++.+|+.+|+++
T Consensus 81 ~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 81 NFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred EEECCCHHHHHHHHHHHHhh
Confidence 99999999999999999864
No 17
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=99.80 E-value=4e-19 Score=136.77 Aligned_cols=91 Identities=22% Similarity=0.438 Sum_probs=75.8
Q ss_pred ceeeEEEeecCCCC----CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639 58 HMDGFLMKRGKESG----KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 58 ~~~G~L~K~g~~~~----~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R 132 (321)
.++|||+|+++..+ .|++|||||. ++.|.||++ .+..|.|+|+|++..+.... ...++++|+|. ....|
T Consensus 1 ~~~GwL~kk~~~~g~~~k~WkkrwfvL~--~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~-~~~k~~~F~I~---~~~~~ 74 (96)
T cd01260 1 DCDGWLWKRKKPGGFMGQKWARRWFVLK--GTTLYWYRSKQDEKAEGLIFLSGFTIESAK-EVKKKYAFKVC---HPVYK 74 (96)
T ss_pred CceeEEEEecCCCCccccCceeEEEEEE--CCEEEEECCCCCCccceEEEccCCEEEEch-hcCCceEEEEC---CCCCc
Confidence 36999999987766 9999999999 999999999 88999999999998554332 23467777764 22239
Q ss_pred EEEEEeCChHHHHHHHHHHHhh
Q psy9639 133 HIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~a 154 (321)
+|+|+|+|++++.+|+.+|++|
T Consensus 75 ~~~f~a~s~~e~~~Wi~ai~~~ 96 (96)
T cd01260 75 SFYFAAETLDDLSQWVNHLITA 96 (96)
T ss_pred EEEEEeCCHHHHHHHHHHHHhC
Confidence 9999999999999999999864
No 18
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.80 E-value=3.6e-19 Score=136.68 Aligned_cols=91 Identities=16% Similarity=0.339 Sum_probs=74.1
Q ss_pred eeeEEEeecCC--CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639 59 MDGFLMKRGKE--SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY 135 (321)
Q Consensus 59 ~~G~L~K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~ 135 (321)
++|||.|+|+. .++|++|||||..+.+.|.||++ .+..|+|+|+|.++..+..+. ..++.|+| .+++|+|+
T Consensus 1 l~GyL~K~g~~~~~K~WkkRWFvL~~~~~~L~Yyk~~~d~~p~G~I~L~~~~~~~~~~--~~~~~F~i----~t~~r~y~ 74 (95)
T cd01265 1 LCGYLHKIEGKGPLRGRRSRWFALDDRTCYLYYYKDSQDAKPLGRVDLSGAAFTYDPR--EEKGRFEI----HSNNEVIA 74 (95)
T ss_pred CcccEEEecCCCCCcCceeEEEEEcCCCcEEEEECCCCcccccceEECCccEEEcCCC--CCCCEEEE----EcCCcEEE
Confidence 37999999874 58999999999843468999999 899999999999986544332 23566665 35679999
Q ss_pred EEeCChHHHHHHHHHHHhhh
Q psy9639 136 VYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 136 l~a~s~~e~~~W~~aLr~a~ 155 (321)
|.|+|++++.+|+++|+.++
T Consensus 75 l~A~s~~e~~~Wi~al~~~~ 94 (95)
T cd01265 75 LKASSDKQMNYWLQALQSKR 94 (95)
T ss_pred EECCCHHHHHHHHHHHHhhc
Confidence 99999999999999998654
No 19
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.79 E-value=1.2e-18 Score=132.18 Aligned_cols=88 Identities=30% Similarity=0.504 Sum_probs=75.1
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC--CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eE
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA--YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RW 257 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~--~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~ 257 (321)
++|||.|+++.. +.|++|||+|+++.|+||+++.+. .|.|.|+|.. +.+.... ..+++|.|.+++ ++
T Consensus 1 ~~G~L~k~~~~~-~~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~----~~~~~~~-----~~~~~F~i~~~~~~~ 70 (91)
T cd01246 1 VEGWLLKWTNYL-KGWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSG----AVISEDD-----SDDKCFTIDTGGDKT 70 (91)
T ss_pred CeEEEEEecccC-CCceeeEEEEECCEEEEEecCccCCCCceEEEEece----EEEEECC-----CCCcEEEEEcCCCCE
Confidence 489999999887 899999999999999999999887 8999999965 4444321 236899999887 99
Q ss_pred EEEEcCCHHHHHHHHHHHhhc
Q psy9639 258 YQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 258 ~~f~A~s~~e~~~Wv~aL~~a 278 (321)
|+|+|+|.+|+++||.||++|
T Consensus 71 ~~~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 71 LHLRANSEEERQRWVDALELA 91 (91)
T ss_pred EEEECCCHHHHHHHHHHHHhC
Confidence 999999999999999998875
No 20
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.79 E-value=1.3e-18 Score=133.51 Aligned_cols=90 Identities=13% Similarity=0.076 Sum_probs=67.8
Q ss_pred EEEEEeC---CCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEE
Q psy9639 183 GWLWKTG---PKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQ 259 (321)
Q Consensus 183 G~L~K~g---~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~ 259 (321)
|.|.|++ +...++||+|||+|+++.|+||+++. ..|+|+|+|..+ ..|..+. ......+++|+|++++|+|+
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt~~~L~Y~k~~~-~~~~g~I~L~~i---~~ve~v~-~~~~~~~~~fqivt~~r~~y 79 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLTTTHLSWAKDVQ-CKKSALIKLAAI---KGTEPLS-DKSFVNVDIITIVCEDDTMQ 79 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEECCCEEEEECCCC-CceeeeEEccce---EEEEEcC-CcccCCCceEEEEeCCCeEE
Confidence 4455544 23347899999999999999999987 479999999876 3344333 22234568999999999999
Q ss_pred EEcCCHHHHHHHHHHHhh
Q psy9639 260 FSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 260 f~A~s~~e~~~Wv~aL~~ 277 (321)
|+|+|++|+++||.||+.
T Consensus 80 i~a~s~~E~~~Wi~al~k 97 (98)
T cd01244 80 LQFEAPVEATDWLNALEK 97 (98)
T ss_pred EECCCHHHHHHHHHHHhc
Confidence 777777777777777765
No 21
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.79 E-value=1.5e-18 Score=132.56 Aligned_cols=92 Identities=34% Similarity=0.607 Sum_probs=74.9
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY 258 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~ 258 (321)
++|||.|+++...+.|++|||+|+++.|.||+++.+ ..+.+.|+|.. ++|.... .. ..++++|.|.+++++|
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~----~~v~~~~-~~-~~~~~~f~i~~~~~~~ 74 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRR----CTVRHNG-KQ-PDRRFCFEVISPTKTW 74 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEeCCeEEEEcCCcccccccceEEeccc----eEEecCc-cc-cCCceEEEEEcCCcEE
Confidence 589999998763379999999999999999999876 56889999953 4454322 11 1367899999999999
Q ss_pred EEEcCCHHHHHHHHHHHhhc
Q psy9639 259 QFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 259 ~f~A~s~~e~~~Wv~aL~~a 278 (321)
+|+|+|++++++||.||+++
T Consensus 75 ~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 75 HFQADSEEERDDWISAIQES 94 (94)
T ss_pred EEECCCHHHHHHHHHHHhcC
Confidence 99999999999999999764
No 22
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.79 E-value=5.3e-19 Score=135.28 Aligned_cols=91 Identities=20% Similarity=0.240 Sum_probs=72.3
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeC----CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDY----RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR 256 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~----~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r 256 (321)
+.|||.|+|+...+.||+|||+|.+ +.|+||+++.+..|+|.|+|..+ .|.++. ++..+++|||+|+++.+
T Consensus 1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~----~V~~v~-ds~~~r~~cFel~~~~~ 75 (98)
T cd01245 1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDA----YLYPVH-DSLFGRPNCFQIVERAL 75 (98)
T ss_pred CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeecccc----EEEEcc-ccccCCCeEEEEecCCC
Confidence 3699999998724899999999986 99999999999999999999653 455433 23346789999999875
Q ss_pred --EEEEEcCCHHHHHHHHHHHhh
Q psy9639 257 --WYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 257 --~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
+|+++|++ +|+++||++|+.
T Consensus 76 ~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 76 PTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CeEEEEeCCH-HHHHHHHHHHhc
Confidence 89977666 777777777654
No 23
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.79 E-value=9.3e-19 Score=134.45 Aligned_cols=94 Identities=17% Similarity=0.317 Sum_probs=73.5
Q ss_pred eeeEEEeecC---CCCCceeeEEEEeccCCeEEeecC-CCCCce-eEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639 59 MDGFLMKRGK---ESGKYHPRRFVLNEINDTIKYYVK-EKKEPK-ATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH 133 (321)
Q Consensus 59 ~~G~L~K~g~---~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pk-g~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~ 133 (321)
.+|||.|+|+ ..++|++|||||. ++.|.||++ ....|. |+|+|+++..+-..+..........+|.+.++.|+
T Consensus 2 ~~G~l~k~~g~~r~~K~WkrRwF~L~--~~~L~y~K~~~~~~~~~g~IdL~~~~sVk~~~~~~~~~~~~~~Fei~tp~rt 79 (101)
T cd01264 2 IEGQLKEKKGRWRFIKRWKTRYFTLS--GAQLLFQKGKSKDDPDDCSIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADKT 79 (101)
T ss_pred cceEEeecCccceeeecceeEEEEEe--CCEEEEEeccCccCCCCceEEcccceEEeeccccccccccCcEEEEEcCCce
Confidence 4899999999 7899999999999 999999999 565666 99999999765432211111112233455577899
Q ss_pred EEEEeCChHHHHHHHHHHHhh
Q psy9639 134 IYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 134 ~~l~a~s~~e~~~W~~aLr~a 154 (321)
|||+|+|++++.+|+++|..|
T Consensus 80 ~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 80 YILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred EEEEeCCHHHHHHHHHHHHhh
Confidence 999999999999999999765
No 24
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=99.78 E-value=2.8e-18 Score=130.48 Aligned_cols=87 Identities=17% Similarity=0.312 Sum_probs=71.3
Q ss_pred eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639 59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY 135 (321)
Q Consensus 59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~ 135 (321)
++|||.|+|...++|++|||||. ++.|.||++ .+ ..|+|+|+|+.+.....+ ..++.|.|. .++.|+|+
T Consensus 1 ~~G~L~K~~~~~k~Wk~RwFvL~--~g~L~Yyk~~~~~~~~~~G~I~L~~~~i~~~~---~~~~~F~i~---~~~~r~~~ 72 (91)
T cd01247 1 TNGVLSKWTNYINGWQDRYFVLK--EGNLSYYKSEAEKSHGCRGSIFLKKAIIAAHE---FDENRFDIS---VNENVVWY 72 (91)
T ss_pred CceEEEEeccccCCCceEEEEEE--CCEEEEEecCccCcCCCcEEEECcccEEEcCC---CCCCEEEEE---eCCCeEEE
Confidence 47999999999999999999998 999999999 55 458999999998543221 335666653 23349999
Q ss_pred EEeCChHHHHHHHHHHHh
Q psy9639 136 VYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 136 l~a~s~~e~~~W~~aLr~ 153 (321)
|.|+|++++.+|+++|..
T Consensus 73 L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 73 LRAENSQSRLLWMDSVVR 90 (91)
T ss_pred EEeCCHHHHHHHHHHHhh
Confidence 999999999999999974
No 25
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.77 E-value=3.6e-18 Score=132.82 Aligned_cols=93 Identities=25% Similarity=0.344 Sum_probs=65.6
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC-CCCCCCceEEEE----
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-GAKDQGFTFTLK---- 252 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~~~~~~~~F~i~---- 252 (321)
++++|||.|+|+.. +.|++|||+|+ ++.|.||++.....+.|.|+|+. ++|..+.+. ....++++|.|.
T Consensus 1 v~k~G~L~K~g~~~-~~Wk~R~f~L~~~~~l~~yk~~~~~~~~~~i~l~~----~~v~~~~~~~~~~~~~~~F~i~~~~~ 75 (102)
T cd01241 1 VVKEGWLHKRGEYI-KTWRPRYFLLKSDGSFIGYKEKPEDGDPFLPPLNN----FSVAECQLMKTERPRPNTFIIRCLQW 75 (102)
T ss_pred CcEEEEEEeecCCC-CCCeeEEEEEeCCCeEEEEecCCCccCccccccCC----eEEeeeeeeeccCCCcceEEEEeccC
Confidence 47999999999987 89999999999 78888888765544567888844 444333221 112456789997
Q ss_pred --eCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 253 --TPQRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 253 --t~~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
+++|+| +|+|++|+++||+||+.+
T Consensus 76 ~~~~~r~f--~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 76 TTVIERTF--HVESPEEREEWIHAIQTV 101 (102)
T ss_pred CcccCEEE--EeCCHHHHHHHHHHHHhh
Confidence 346765 467777777777777654
No 26
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.77 E-value=5e-18 Score=137.06 Aligned_cols=96 Identities=18% Similarity=0.424 Sum_probs=79.3
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeec--------
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKD-------- 128 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~-------- 128 (321)
.++|||+|+|+..+.|++|||||. ++.|.||++ ++..|+|+|+|+++.+...+ ..+.+++|+|....+
T Consensus 1 ~k~G~L~K~~~~~~~WkkRwfvL~--~~~L~yyk~~~~~~~~g~I~L~~~~v~~~~-~~~~~~~F~i~~~~~~~~i~~~~ 77 (125)
T cd01252 1 DREGWLLKQGGRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENVSIREVE-DPSKPFCFELFSPSDKQQIKACK 77 (125)
T ss_pred CcEEEEEEeCCCCCCeEeEEEEEE--CCEEEEEcCCCCCCceEEEECCCcEEEEcc-cCCCCeeEEEECCcccccccccc
Confidence 378999999999999999999999 899999999 88999999999987654432 235678887743222
Q ss_pred ---------CceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639 129 ---------GSTRHIYVYHEESQSIMNWYHAIRNAKF 156 (321)
Q Consensus 129 ---------~~~R~~~l~a~s~~e~~~W~~aLr~a~~ 156 (321)
+..+.|+|+|+|++++.+|+.+|+.+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 78 TESDGRVVEGNHSVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred ccccccccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 2347888999999999999999987754
No 27
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=99.77 E-value=2.8e-18 Score=134.32 Aligned_cols=90 Identities=20% Similarity=0.429 Sum_probs=70.9
Q ss_pred ceeeEEEeecCCCC-----CceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEe-ccCCC------CCCceeE
Q psy9639 58 HMDGFLMKRGKESG-----KYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVI-APSKI------EHPHSLQ 122 (321)
Q Consensus 58 ~~~G~L~K~g~~~~-----~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~-~~~~~------~~~~~~~ 122 (321)
+++|+|+|+++..+ +|++|||||. +++|.||++ .+ ..|+|.|+|..+..+- .++.. ...++|+
T Consensus 1 ~k~g~l~Kr~~~~~~~~~~nwKkRwFvL~--~~~L~Yyk~~~~~~~~~kG~I~L~~~~~ve~~~~~~~~~~~~~~~~~F~ 78 (106)
T cd01238 1 ILESILVKRSQQKKKTSPLNYKERLFVLT--KSKLSYYEGDFEKRGSKKGSIDLSKIKCVETVKPEKNPPIPERFKYPFQ 78 (106)
T ss_pred CcceeeeeeccCCCCCCCCCceeEEEEEc--CCEEEEECCCcccccCcceeEECCcceEEEEecCCcCcccccccCccEE
Confidence 47999999986543 8999999998 999999999 54 5899999999985542 11111 2345555
Q ss_pred EEEeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
|. ++.|+||+.|+|++|+.+|+.+|++
T Consensus 79 i~----t~~r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 79 VV----HDEGTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred EE----eCCCeEEEEcCCHHHHHHHHHHHHh
Confidence 53 4569999999999999999999985
No 28
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.76 E-value=5.8e-18 Score=131.18 Aligned_cols=89 Identities=16% Similarity=0.334 Sum_probs=70.7
Q ss_pred eeeEEEeecCC---------CCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccC-CCCCCceeEEEEe
Q psy9639 59 MDGFLMKRGKE---------SGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPS-KIEHPHSLQLTFM 126 (321)
Q Consensus 59 ~~G~L~K~g~~---------~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~-~~~~~~~~~i~~~ 126 (321)
++|||.|.++. .++||||||||. +++.|.||++ .+..|+|+|+|+.+..+...+ ..+++++|.|
T Consensus 1 ~~g~l~~~~~~~~~~~~~~~~K~WkrRWFvL~-~~~~L~y~~d~~~~~~p~G~IdL~~~~~V~~~~~~~~~~~~f~I--- 76 (104)
T cd01236 1 YCGWLLVAPDGTDFDNPVHRSKRWQRRWFILY-DHGLLTYALDEMPTTLPQGTIDMNQCTDVVDAEARTGQKFSICI--- 76 (104)
T ss_pred CcceeEEcCCCCcccccceeeccccceEEEEe-CCCEEEEeeCCCCCcccceEEEccceEEEeecccccCCccEEEE---
Confidence 47999998765 467999999998 2567777766 478999999999987665332 3455667665
Q ss_pred ecCceEEEEEEeCChHHHHHHHHHHH
Q psy9639 127 KDGSTRHIYVYHEESQSIMNWYHAIR 152 (321)
Q Consensus 127 ~~~~~R~~~l~a~s~~e~~~W~~aLr 152 (321)
.++.|+|||.|+|++|+.+|+++|.
T Consensus 77 -~tp~R~f~l~Aete~E~~~Wi~~l~ 101 (104)
T cd01236 77 -LTPDKEHFIKAETKEEISWWLNMLM 101 (104)
T ss_pred -ECCCceEEEEeCCHHHHHHHHHHHH
Confidence 4667999999999999999999986
No 29
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=99.75 E-value=9e-18 Score=132.04 Aligned_cols=93 Identities=18% Similarity=0.293 Sum_probs=71.1
Q ss_pred eeeEEEeecCCC----CCceeeEEEEeccCCe-------EEeecC-CCCCceeEEeccceEEEecc-CCCCCCceeEEEE
Q psy9639 59 MDGFLMKRGKES----GKYHPRRFVLNEINDT-------IKYYVK-EKKEPKATLRISELNVVIAP-SKIEHPHSLQLTF 125 (321)
Q Consensus 59 ~~G~L~K~g~~~----~~wk~R~fvL~~~~~~-------L~Yy~~-~~~~pkg~I~l~~~~~~~~~-~~~~~~~~~~i~~ 125 (321)
.+|||.|+|+.. ++|++|||||. ++. |.||++ .+..|+|+|+|+.+..+-.. .....+..+++.|
T Consensus 1 ~eGwL~K~~~~~~~~~~~WkrRwFvL~--~~~l~~~~~~L~Yyk~~~~~k~~g~I~L~~~~~v~~~~~~~~~~~~~~~~f 78 (108)
T cd01266 1 LEGWLKKSPPYKLLFRTKWVRRYFVLH--CGDRERNLFALEYYKTSRKFKLEFVIDLESCSQVDPGLLCTAGNCIFGYGF 78 (108)
T ss_pred CceeeeeCCccccccccCcEEEEEEEe--ccccCCCcceEEEECCCCCCccceEEECCccEEEcccccccccCcccceEE
Confidence 489999999854 49999999998 554 699999 88999999999997553211 0011122333445
Q ss_pred eecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 126 MKDGSTRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
.+.++.|+|||.|+|++++.+|+.+|++
T Consensus 79 ~i~t~~r~y~l~A~s~ee~~~Wi~~I~~ 106 (108)
T cd01266 79 DIETIVRDLYLVAKNEEEMTLWVNCICK 106 (108)
T ss_pred EEEeCCccEEEEECCHHHHHHHHHHHHh
Confidence 5556789999999999999999999975
No 30
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.73 E-value=5.5e-17 Score=124.87 Aligned_cols=96 Identities=35% Similarity=0.585 Sum_probs=76.4
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC---CCCcceeEEcccccCceEEecCCCCC---CCCCCceEEEE
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRLGVPPG---AKDQGFTFTLK 252 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~---~~~~~g~i~L~~~~~~~~V~~~~~~~---~~~~~~~F~i~ 252 (321)
++++|||.+++... +.|++|||+|.++.|+||+++. +..+.+.|+|.. +.|....... ....+++|.|.
T Consensus 1 ~~~~G~L~~~~~~~-~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~----~~v~~~~~~~~~~~~~~~~~f~i~ 75 (104)
T PF00169_consen 1 CIKEGWLLKKSSSR-KKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDD----CTVRPDPSSDFLSNKKRKNCFEIT 75 (104)
T ss_dssp EEEEEEEEEEESSS-SSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTT----EEEEEETSSTSTSTSSSSSEEEEE
T ss_pred CEEEEEEEEECCCC-CCeEEEEEEEECCEEEEEecCccccceeeeEEEEecC----ceEEEcCccccccccCCCcEEEEE
Confidence 46899999999665 7999999999999999999998 678999999954 5565533221 23567999999
Q ss_pred eCCe-EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 253 TPQR-WYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 253 t~~r-~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
++++ +|+|+|+|++++..|+++|+.++
T Consensus 76 ~~~~~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 76 TPNGKSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp ETTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred eCCCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 9875 99977777777777777777654
No 31
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=99.71 E-value=8.8e-17 Score=124.10 Aligned_cols=86 Identities=24% Similarity=0.412 Sum_probs=69.4
Q ss_pred cceeeEEEeecCCCCCceeeEEEEeccCC------eEEeecC-CC-----CCceeEEeccceEEEeccCCCCCCceeEEE
Q psy9639 57 GHMDGFLMKRGKESGKYHPRRFVLNEIND------TIKYYVK-EK-----KEPKATLRISELNVVIAPSKIEHPHSLQLT 124 (321)
Q Consensus 57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~------~L~Yy~~-~~-----~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~ 124 (321)
..++|||.|+ +.|+||||||. ++ .|.||++ .+ ..|+|+|.|.++..+.......+.|+|.|
T Consensus 2 v~k~GyL~K~----K~~kkRwFVLr--~~~~~~p~~Leyyk~ek~~~~~~~~p~~vI~L~~c~~v~~~~d~k~~~~f~i- 74 (101)
T cd01257 2 VRKSGYLRKQ----KSMHKRFFVLR--AESSGGPARLEYYENEKKFLQKGSAPKRVIPLESCFNINKRADAKHRHLIAL- 74 (101)
T ss_pred ccEEEEEeEe----cCcEeEEEEEe--cCCCCCCceEEEECChhhccccCCCceEEEEccceEEEeeccccccCeEEEE-
Confidence 4689999998 78999999998 45 7999999 43 78999999999976543323334466555
Q ss_pred EeecCceEEEEEEeCChHHHHHHHHHHH
Q psy9639 125 FMKDGSTRHIYVYHEESQSIMNWYHAIR 152 (321)
Q Consensus 125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr 152 (321)
.++.|+|+|.|+|++|+.+|+.+|.
T Consensus 75 ---~t~dr~f~l~aese~E~~~Wi~~i~ 99 (101)
T cd01257 75 ---YTRDEYFAVAAENEAEQDSWYQALL 99 (101)
T ss_pred ---EeCCceEEEEeCCHHHHHHHHHHHh
Confidence 3466999999999999999999985
No 32
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.70 E-value=5.6e-17 Score=124.14 Aligned_cols=92 Identities=16% Similarity=0.227 Sum_probs=74.5
Q ss_pred eeeEEEeecCC-CCCceeeEEEEec--cCCeEEeecC-CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEeecCceEE
Q psy9639 59 MDGFLMKRGKE-SGKYHPRRFVLNE--INDTIKYYVK-EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMKDGSTRH 133 (321)
Q Consensus 59 ~~G~L~K~g~~-~~~wk~R~fvL~~--~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~~~~~R~ 133 (321)
+.|||.|+|+. .+.||+|||+|.. .++.|.||++ .+.+|+|.|+|+++.+.. +....+.||+|++..... .++
T Consensus 1 ~~G~l~K~g~~~~K~wK~rwF~l~~~~s~~~l~yf~~~~~~~p~gli~l~~~~V~~v~ds~~~r~~cFel~~~~~--~~~ 78 (98)
T cd01245 1 KKGNLLKRTKSVTKLWKTLYFALILDGSRSHESLLSSPKKTKPIGLIDLSDAYLYPVHDSLFGRPNCFQIVERAL--PTV 78 (98)
T ss_pred CCCccccCCCCcccccceeEEEEecCCCCceEEEEcCCCCCCccceeeccccEEEEccccccCCCeEEEEecCCC--CeE
Confidence 36999999998 8999999999971 1399999999 999999999999994432 233568899999853211 258
Q ss_pred EEEEeCChHHHHHHHHHHHh
Q psy9639 134 IYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 134 ~~l~a~s~~e~~~W~~aLr~ 153 (321)
||++|++ +|+++||++|+.
T Consensus 79 y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 79 YYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred EEEeCCH-HHHHHHHHHHhc
Confidence 8999999 999999999974
No 33
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.70 E-value=2.5e-16 Score=119.42 Aligned_cols=88 Identities=19% Similarity=0.397 Sum_probs=73.5
Q ss_pred eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC--CceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639 59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK--EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY 135 (321)
Q Consensus 59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~--~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~ 135 (321)
++|||+|+++..+.|++|||||. ++.|.||++ .+. .|.|.|.|+.+.+...+ ..++.|+|.. ..+++++
T Consensus 1 ~~G~L~k~~~~~~~W~~r~~vl~--~~~L~~~~~~~~~~~~~~~~i~l~~~~~~~~~---~~~~~F~i~~---~~~~~~~ 72 (91)
T cd01246 1 VEGWLLKWTNYLKGWQKRWFVLD--NGLLSYYKNKSSMRGKPRGTILLSGAVISEDD---SDDKCFTIDT---GGDKTLH 72 (91)
T ss_pred CeEEEEEecccCCCceeeEEEEE--CCEEEEEecCccCCCCceEEEEeceEEEEECC---CCCcEEEEEc---CCCCEEE
Confidence 58999999998899999999999 999999999 666 89999999998543322 3467777642 2239999
Q ss_pred EEeCChHHHHHHHHHHHhh
Q psy9639 136 VYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 136 l~a~s~~e~~~W~~aLr~a 154 (321)
|+|+|.+++.+|+.+|+.|
T Consensus 73 ~~a~s~~e~~~Wi~al~~a 91 (91)
T cd01246 73 LRANSEEERQRWVDALELA 91 (91)
T ss_pred EECCCHHHHHHHHHHHHhC
Confidence 9999999999999999864
No 34
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.69 E-value=2.4e-16 Score=120.19 Aligned_cols=90 Identities=17% Similarity=0.345 Sum_probs=73.0
Q ss_pred eeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639 59 MDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI 134 (321)
Q Consensus 59 ~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~ 134 (321)
++|||.|+++. .+.|++|||||. ++.|.||++ .+ ..|.+.|+|..+.+...+.....+++|+|. .+.++|
T Consensus 1 k~G~L~kk~~~~~~~W~kr~~~L~--~~~l~~y~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~----~~~~~~ 74 (94)
T cd01250 1 KQGYLYKRSSKSNKEWKKRWFVLK--NGQLTYHHRLKDYDNAHVKEIDLRRCTVRHNGKQPDRRFCFEVI----SPTKTW 74 (94)
T ss_pred CcceEEEECCCcCCCceEEEEEEe--CCeEEEEcCCcccccccceEEeccceEEecCccccCCceEEEEE----cCCcEE
Confidence 58999999876 789999999999 999999998 54 788899999987554444322356677764 344999
Q ss_pred EEEeCChHHHHHHHHHHHhh
Q psy9639 135 YVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 135 ~l~a~s~~e~~~W~~aLr~a 154 (321)
+|+|+|.+++.+|+.+|+++
T Consensus 75 ~f~a~s~~~~~~Wi~al~~~ 94 (94)
T cd01250 75 HFQADSEEERDDWISAIQES 94 (94)
T ss_pred EEECCCHHHHHHHHHHHhcC
Confidence 99999999999999999753
No 35
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.68 E-value=3.5e-16 Score=125.34 Aligned_cols=95 Identities=21% Similarity=0.407 Sum_probs=75.8
Q ss_pred eEEEEEEeCCCCC-----------------CCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC---
Q psy9639 181 REGWLWKTGPKNA-----------------DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP--- 240 (321)
Q Consensus 181 k~G~L~K~g~~~~-----------------~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~--- 240 (321)
|+|||.|+++... ..|++|||+|+++.|.||+++.+..++|+|.+. .++.|......
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr~s~L~Y~~~~~~~~~~~vil~D---~~f~v~~~~~~~~~ 77 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVKESFLAYMDDPSSAQILDVILFD---VDFKVNGGGKEDIS 77 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEeCCEEEEEcCCCCCceeeEEEEc---CCccEEeCCccccc
Confidence 5899998765421 169999999999999999999999999999995 45777654322
Q ss_pred ------CCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 241 ------GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 241 ------~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
+.....++|.|.+++|+|.|.|+|+.++++||++|+.|
T Consensus 78 ~~~~~~~~~~~~~~~~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 78 LAVELKDITGLRHGLKITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred ccccccccCCCceEEEEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 11245689999999999998888888888888888764
No 36
>KOG0703|consensus
Probab=99.68 E-value=3.9e-18 Score=151.92 Aligned_cols=171 Identities=30% Similarity=0.493 Sum_probs=124.4
Q ss_pred CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC-Cccccccce-eeE--EEeecCCCCCceee
Q psy9639 1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE-ALTYITGHM-DGF--LMKRGKESGKYHPR 76 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~-~~~~~~~~~-~G~--L~K~g~~~~~wk~R 76 (321)
|..+||.+||++||++||..|++|++++ ++|+|||+|||+++|+.++ +.++..+.+ +++ ++|.++...+-..|
T Consensus 81 m~~~GN~~an~~~ea~~p~~~~~p~~d~---~~e~FIR~KYE~kkf~~~~~~~~s~~~~~~~~~k~~~~~~~~~~~s~s~ 157 (287)
T KOG0703|consen 81 MISMGNAKANSYYEAKLPDPFRRPGPDD---LVEQFIRDKYERKKFLDPEEDITSKPGSRDEESKRSDKRSRKLSSSLSR 157 (287)
T ss_pred HHHHcchhhhhhccccCCccccCCChHH---HHHHHHHHHHhhhhhccchhhcccCCCcccccccccccCccccccchhh
Confidence 7889999999999999999999999998 8899999999999999986 555544444 344 68888888888888
Q ss_pred EEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 77 RFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 77 ~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
-|+...+.+.++|+.. .. ........+.+. +++.++.+..+ ..++.++.+- +..+...|.. .+...
T Consensus 158 ~~~~~~r~~~~~~~~~~~s-------~~~~~~~~~~~~-~~~i~~~~~~~-~~~s~~n~~~---~~~~~~~~~~-~~~~~ 224 (287)
T KOG0703|consen 158 SFVKSAREDQLKYFLPKTS-------QPVDDLATFQGP-IASPHNLQTTY-SLNSTLNIFG---SGKEAADSFT-LRAAR 224 (287)
T ss_pred hhhhhccccccccccccCC-------CCchhhhhccCc-cccccchheee-cccccccccc---CccccCCCcc-ccccc
Confidence 8887666888888888 44 222222334444 67778888777 7776776654 7777888888 77666
Q ss_pred hhhccccCCCCChhhhhhhhCCCcceEEEEEEe
Q psy9639 156 FHRLQVAFPSANDSELVKLLTRDFGREGWLWKT 188 (321)
Q Consensus 156 ~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~ 188 (321)
+.....+.++.. .++.+........+++..+.
T Consensus 225 ~~~~~~~~~~~~-~~~~~~~~~~s~~~~f~~~~ 256 (287)
T KOG0703|consen 225 FAPLAVAFSTVT-EDLVPFLQRNSLSEGFMEKT 256 (287)
T ss_pred ccccccccccCc-cccccccccccccccccCcc
Confidence 666655566665 55555444455555555554
No 37
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.66 E-value=1.5e-15 Score=120.02 Aligned_cols=97 Identities=29% Similarity=0.497 Sum_probs=53.8
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCCC-------------CCCcceeEEcccccCceE-EecCCCCCCCCC
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEPL-------------SAYPKGEIFLGHCSDGYT-VRLGVPPGAKDQ 245 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~~-------------~~~~~g~i~L~~~~~~~~-V~~~~~~~~~~~ 245 (321)
++|||+|.++...++||+|||+|. ++.|.||+.+. .....|.+.......... +....+.+ ...
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 79 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRKDGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFG-EIH 79 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE-TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--S-S-S
T ss_pred CCceEEEecCCCCcCccccEEEEEeCCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCccc-CcC
Confidence 689999999983389999999999 99999999942 222334443322111111 11001111 123
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 246 GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 246 ~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
...|.|.||.|+|.|.|++.+|+..||+||+.|
T Consensus 80 ~~~~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 80 LKVFSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp SEEEEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCCcEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 467889999999997777777777777777654
No 38
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.65 E-value=1.7e-15 Score=117.53 Aligned_cols=93 Identities=19% Similarity=0.296 Sum_probs=69.7
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCC-----CCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPL-----SAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT 253 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~-----~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t 253 (321)
++++|||.|.+... +.|+.|||.|-++.|.|++... ...+++.|+|. ++.|.... ....+|+|.|.+
T Consensus 2 ~ikeG~L~K~~~~~-~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~----~~~v~~~~---~~~~~~~F~I~~ 73 (101)
T cd01219 2 LLKEGSVLKISSTT-EKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVS----GMQVCEGD---NLERPHSFLVSG 73 (101)
T ss_pred cccceEEEEEecCC-CCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecc----cEEEEeCC---CCCcCceEEEec
Confidence 57999999999887 7999999999999999998532 22456788884 45665421 234679999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 254 PQRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 254 ~~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
++|+|+|+|+|++|+++||+||+.+|
T Consensus 74 ~~rsf~l~A~s~eEk~~W~~ai~~~i 99 (101)
T cd01219 74 KQRCLELQARTQKEKNDWVQAIFSII 99 (101)
T ss_pred CCcEEEEEcCCHHHHHHHHHHHHHHh
Confidence 99999966666666666666666554
No 39
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.64 E-value=2.1e-15 Score=117.24 Aligned_cols=94 Identities=19% Similarity=0.352 Sum_probs=68.3
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEE---EeccCCCCCCceeEEEEeec--Cce
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNV---VIAPSKIEHPHSLQLTFMKD--GST 131 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~---~~~~~~~~~~~~~~i~~~~~--~~~ 131 (321)
.++|||.|+|+..+.|++|||||.. ++.|.||++ ....+.+.|+|.+..+ ........++++|.|.+... ...
T Consensus 2 ~k~G~L~K~g~~~~~Wk~R~f~L~~-~~~l~~yk~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~F~i~~~~~~~~~~ 80 (102)
T cd01241 2 VKEGWLHKRGEYIKTWRPRYFLLKS-DGSFIGYKEKPEDGDPFLPPLNNFSVAECQLMKTERPRPNTFIIRCLQWTTVIE 80 (102)
T ss_pred cEEEEEEeecCCCCCCeeEEEEEeC-CCeEEEEecCCCccCccccccCCeEEeeeeeeeccCCCcceEEEEeccCCcccC
Confidence 5899999999999999999999983 678998888 4444457888877643 12122234567787753321 234
Q ss_pred EEEEEEeCChHHHHHHHHHHHhh
Q psy9639 132 RHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 132 R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
|+| +|+|++++.+|+.+|+.+
T Consensus 81 r~f--~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 81 RTF--HVESPEEREEWIHAIQTV 101 (102)
T ss_pred EEE--EeCCHHHHHHHHHHHHhh
Confidence 644 689999999999999854
No 40
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.64 E-value=1.6e-15 Score=120.71 Aligned_cols=93 Identities=26% Similarity=0.438 Sum_probs=62.9
Q ss_pred eEEEEEE-eCCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecC--CCCCCCCCCceEEEEe-
Q psy9639 181 REGWLWK-TGPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLG--VPPGAKDQGFTFTLKT- 253 (321)
Q Consensus 181 k~G~L~K-~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~--~~~~~~~~~~~F~i~t- 253 (321)
-.|||.- +...+.+.|++|||+|+|+.|+||+.+.+ ..|.|.|+|..+ .+... .+.....+++.|.|..
T Consensus 3 ~~GfL~~~q~~~~~k~W~RRWFvL~g~~L~y~k~p~d~~~~~Plg~I~L~~c----~~~~v~~~~r~~c~Rp~tF~i~~~ 78 (122)
T cd01263 3 YHGFLTMFEDTSGFGAWHRRWCALEGGEIKYWKYPDDEKRKGPTGLIDLSTC----TSSEGASAVRDICARPNTFHLDVW 78 (122)
T ss_pred cceeEEEEeccCCCCCceEEEEEEeCCEEEEEcCCCccccCCceEEEEhhhC----cccccccCChhhcCCCCeEEEEEe
Confidence 4799984 54444589999999999999999998776 679999999764 23222 2333446788898853
Q ss_pred -CC-----------------eEE-EEEcCCHHHHHHHHHHHhh
Q psy9639 254 -PQ-----------------RWY-QFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 254 -~~-----------------r~~-~f~A~s~~e~~~Wv~aL~~ 277 (321)
+. |+| +|+|+|.+|+++||.||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~ 121 (122)
T cd01263 79 RPKMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNS 121 (122)
T ss_pred cccccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhc
Confidence 21 333 4555555555555555554
No 41
>KOG0930|consensus
Probab=99.63 E-value=1.1e-15 Score=134.18 Aligned_cols=100 Identities=19% Similarity=0.432 Sum_probs=81.1
Q ss_pred cccccceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEe----
Q psy9639 53 TYITGHMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFM---- 126 (321)
Q Consensus 53 ~~~~~~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~---- 126 (321)
.+.+..++|||.|.|+ ..++||||||+|. +++|.||.- .|++|+|.|+|.+++. ...+...+|++|.+...
T Consensus 256 tffnpdREGWLlKlgg~rvktWKrRWFiLt--dNCLYYFe~tTDKEPrGIIpLeNlsi-r~VedP~kP~cfEly~ps~~g 332 (395)
T KOG0930|consen 256 TFFNPDREGWLLKLGGNRVKTWKRRWFILT--DNCLYYFEYTTDKEPRGIIPLENLSI-REVEDPKKPNCFELYIPSNKG 332 (395)
T ss_pred hccCccccceeeeecCCcccchhheeEEee--cceeeeeeeccCCCCCcceeccccce-eeccCCCCCCeEEEecCCCCc
Confidence 3446789999999998 5689999999999 999999999 9999999999999854 22234467888876221
Q ss_pred --------------ecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 127 --------------KDGSTRHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 127 --------------~~~~~R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
.+|..-.|.++|.+.+++++|+++|+++.
T Consensus 333 q~IKACKTe~DGRvVEG~H~vYrIsA~~~Ee~~~Wi~sI~a~i 375 (395)
T KOG0930|consen 333 QVIKACKTEADGRVVEGNHSVYRISAPTPEEKDEWIKSIKAAI 375 (395)
T ss_pred CeeeeecccCCceeEeccceEEEeeCCCHHHHHHHHHHHHHHh
Confidence 12445568899999999999999998764
No 42
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.63 E-value=2.4e-15 Score=115.45 Aligned_cols=87 Identities=9% Similarity=0.188 Sum_probs=68.9
Q ss_pred eEEEeecCC----CCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEec--cCCCCCCceeEEEEeecCceEEE
Q psy9639 61 GFLMKRGKE----SGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIA--PSKIEHPHSLQLTFMKDGSTRHI 134 (321)
Q Consensus 61 G~L~K~g~~----~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~R~~ 134 (321)
|.|.|+.+. ..+||+|||+|. ++.|.||++....|+|+|+|..+..+.. ....+.+++|+|.. +.|+|
T Consensus 5 ~~~~kr~~~~~~~~~n~KkRwF~Lt--~~~L~Y~k~~~~~~~g~I~L~~i~~ve~v~~~~~~~~~~fqivt----~~r~~ 78 (98)
T cd01244 5 LQQVDRSRLAWKKVLHFKKRYFQLT--TTHLSWAKDVQCKKSALIKLAAIKGTEPLSDKSFVNVDIITIVC----EDDTM 78 (98)
T ss_pred cEEEEcccCCCccCcCCceeEEEEC--CCEEEEECCCCCceeeeEEccceEEEEEcCCcccCCCceEEEEe----CCCeE
Confidence 445565422 368999999999 8999999995579999999999977642 22345567787753 45899
Q ss_pred EEEeCChHHHHHHHHHHHh
Q psy9639 135 YVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 135 ~l~a~s~~e~~~W~~aLr~ 153 (321)
|+.|+|++|+.+|+.+|+.
T Consensus 79 yi~a~s~~E~~~Wi~al~k 97 (98)
T cd01244 79 QLQFEAPVEATDWLNALEK 97 (98)
T ss_pred EEECCCHHHHHHHHHHHhc
Confidence 9999999999999999974
No 43
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.63 E-value=3.3e-15 Score=111.65 Aligned_cols=86 Identities=23% Similarity=0.438 Sum_probs=71.9
Q ss_pred EEEEEeCCCCCCCcceEEEEE--eCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEE
Q psy9639 183 GWLWKTGPKNADAYRKRWFTL--DYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQF 260 (321)
Q Consensus 183 G~L~K~g~~~~~~WkkRwfvL--~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f 260 (321)
|||.|+..+..++|++|||+| ..+.|.||.++.+....|.|+|+.. .|+.. .+...|.|.+...+|+|
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a----~is~~------~~~~~I~idsg~~i~hL 70 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLA----VISAN------KKSRRIDIDSGDEIWHL 70 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccce----EEEec------CCCCEEEEEcCCeEEEE
Confidence 899998776669999999999 7999999999988889999999653 33321 23457999999999999
Q ss_pred EcCCHHHHHHHHHHHhhc
Q psy9639 261 SALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 261 ~A~s~~e~~~Wv~aL~~a 278 (321)
.|.|+++.+.||.||+.|
T Consensus 71 Ka~s~~~f~~Wv~aL~~a 88 (89)
T PF15409_consen 71 KAKSQEDFQRWVSALQKA 88 (89)
T ss_pred EcCCHHHHHHHHHHHHhc
Confidence 999999999999998865
No 44
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.59 E-value=2.1e-14 Score=110.63 Aligned_cols=93 Identities=18% Similarity=0.243 Sum_probs=64.6
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ 255 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~ 255 (321)
++++|+|.|.+++. .|+|+||.+.+..|++.....+. .+.|.|+|. ++.|++.. +....+|+|+|.++.
T Consensus 2 ~ikEG~L~K~~~k~--~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~----~~~V~~~~--~~~~~~~~F~I~~~~ 73 (99)
T cd01220 2 FIRQGCLLKLSKKG--LQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLR----GMLTEESE--HEWGVPHCFTIFGGQ 73 (99)
T ss_pred eeeEEEEEEEeCCC--CceEEEEEccceEEEEEeecCCCceEEEEEEEEcC----ceEEeecc--CCcCCceeEEEEcCC
Confidence 58999999998754 56655555555445444444433 478999994 45676533 222457899999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 256 RWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 256 r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
++|.|+|+|++|+++||++|+.||
T Consensus 74 ks~~l~A~s~~Ek~~Wi~~i~~aI 97 (99)
T cd01220 74 CAITVAASTRAEKEKWLADLSKAI 97 (99)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHh
Confidence 999977777777777777777765
No 45
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=99.59 E-value=3.4e-14 Score=109.13 Aligned_cols=92 Identities=23% Similarity=0.453 Sum_probs=78.0
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEEEeccCC-----CCCCceeEEEEeec
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNVVIAPSK-----IEHPHSLQLTFMKD 128 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~~~~~~~-----~~~~~~~~i~~~~~ 128 (321)
.++|||.|++...+.|++|||||. ++.|.||++ . +..|.+.|+|.++.+...+.. ...+++|.|.+.
T Consensus 2 ~~~G~L~~~~~~~~~wk~r~~vL~--~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~~~~f~i~~~-- 77 (104)
T PF00169_consen 2 IKEGWLLKKSSSRKKWKKRYFVLR--DSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSDFLSNKKRKNCFEITTP-- 77 (104)
T ss_dssp EEEEEEEEEESSSSSEEEEEEEEE--TTEEEEESSTTTTTESSESEEEEGTTEEEEEETSSTSTSTSSSSSEEEEEET--
T ss_pred EEEEEEEEECCCCCCeEEEEEEEE--CCEEEEEecCccccceeeeEEEEecCceEEEcCccccccccCCCcEEEEEeC--
Confidence 579999999988899999999999 999999999 6 689999999999966544333 457788887642
Q ss_pred CceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 129 GSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 129 ~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
..+.++|+|+|++++..|+.+|+.+
T Consensus 78 -~~~~~~~~~~s~~~~~~W~~~i~~~ 102 (104)
T PF00169_consen 78 -NGKSYLFSAESEEERKRWIQAIQKA 102 (104)
T ss_dssp -TSEEEEEEESSHHHHHHHHHHHHHH
T ss_pred -CCcEEEEEcCCHHHHHHHHHHHHHH
Confidence 2268999999999999999999865
No 46
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.56 E-value=2.1e-14 Score=110.14 Aligned_cols=82 Identities=18% Similarity=0.270 Sum_probs=63.8
Q ss_pred CCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC----eEEEEEcCCHHHHH
Q psy9639 194 DAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ----RWYQFSALSAPDRD 269 (321)
Q Consensus 194 ~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~----r~~~f~A~s~~e~~ 269 (321)
++||+|||+|+++.|+||++..+..+.|+|.|.. .||.|.... ....+.|+|.+.+|. |+|+|.|+|++++.
T Consensus 18 K~~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl--~gcev~~dv--~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya 93 (106)
T cd01237 18 KGYKQYWFTFRDTSISYYKSKEDSNGAPIGQLNL--KGCEVTPDV--NVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYA 93 (106)
T ss_pred hhheeEEEEEeCCEEEEEccchhcCCCCeEEEec--CceEEcccc--cccccceEEEEecCCccCCeEEEEECCCHHHHH
Confidence 6899999999999999999988766777776654 577776533 222456999999886 99998887777777
Q ss_pred HHHHHHhhcc
Q psy9639 270 QWIQAVQTGF 279 (321)
Q Consensus 270 ~Wv~aL~~ai 279 (321)
+||.|++.|.
T Consensus 94 ~Wmaa~rlas 103 (106)
T cd01237 94 KWMAACRLAS 103 (106)
T ss_pred HHHHHHHHhh
Confidence 7777776653
No 47
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.55 E-value=6.9e-14 Score=104.27 Aligned_cols=101 Identities=20% Similarity=0.275 Sum_probs=72.2
Q ss_pred cceEEEEEEeCCCC-CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-e
Q psy9639 179 FGREGWLWKTGPKN-ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-R 256 (321)
Q Consensus 179 ~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r 256 (321)
+++.|||.-..... .++=|+|||||+..+|+||++..+.+++|.|+| ++..++..+ .+...++|+|.|..|+ |
T Consensus 1 virkgwl~~~n~~~m~ggsK~~WFVLt~~~L~wykd~eeKE~kyilpL----dnLk~Rdve-~gf~sk~~~FeLfnpd~r 75 (110)
T cd01256 1 VIRKGWLSISNVGIMKGGSKDYWFVLTSESLSWYKDDEEKEKKYMLPL----DGLKLRDIE-GGFMSRNHKFALFYPDGR 75 (110)
T ss_pred CeeeeeEEeeccceecCCCcceEEEEecceeeeecccccccccceeec----cccEEEeec-ccccCCCcEEEEEcCccc
Confidence 47899998765433 245899999999999999999999999999999 456676654 4445678999999763 3
Q ss_pred EEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHH
Q psy9639 257 WYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 309 (321)
Q Consensus 257 ~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~ 309 (321)
..| ..|+...|+|+|.+|.+.|...+-.
T Consensus 76 nvy-------------------------kd~k~lel~~~~~e~vdswkasflr 103 (110)
T cd01256 76 NVY-------------------------KDYKQLELGCETLEEVDSWKASFLR 103 (110)
T ss_pred ccc-------------------------cchheeeecCCCHHHHHHHHHHHHh
Confidence 222 2344444666666666666655543
No 48
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.52 E-value=1.1e-13 Score=107.86 Aligned_cols=80 Identities=16% Similarity=0.297 Sum_probs=58.9
Q ss_pred CCCcceEEEEEeCCeeEeeeCCCCC--Ccce--eEEcccccCceEEecCCCCCCCCCCceEEEEeC-CeEEEEEcCCHHH
Q psy9639 193 ADAYRKRWFTLDYRKLMYHEEPLSA--YPKG--EIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-QRWYQFSALSAPD 267 (321)
Q Consensus 193 ~~~WkkRwfvL~~~~L~Yyk~~~~~--~~~g--~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e 267 (321)
.+.|++|||+|+++.|+||+++... ...+ .|++. ++.|.... +...++++|.|.++ +++|+|+|+|+++
T Consensus 20 ~~~Wk~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~----~~~i~~~~--~~~k~~~~F~l~~~~~~~~~f~a~s~e~ 93 (104)
T cd01253 20 NRSWDNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLT----GAQCEVAS--DYTKKKHVFRLRLPDGAEFLFQAPDEEE 93 (104)
T ss_pred CCCcceEEEEEeCCEEEEEecCcccccCCCCCCcEecc----CCEEEecC--CcccCceEEEEEecCCCEEEEECCCHHH
Confidence 3689999999999999999988643 3344 44442 34443322 22246789999855 5999999999999
Q ss_pred HHHHHHHHhhc
Q psy9639 268 RDQWIQAVQTG 278 (321)
Q Consensus 268 ~~~Wv~aL~~a 278 (321)
|.+||.||+.+
T Consensus 94 ~~~Wi~aL~~~ 104 (104)
T cd01253 94 MSSWVRALKSA 104 (104)
T ss_pred HHHHHHHHhcC
Confidence 99999999764
No 49
>KOG1117|consensus
Probab=99.52 E-value=1.2e-14 Score=143.40 Aligned_cols=219 Identities=20% Similarity=0.278 Sum_probs=160.3
Q ss_pred CccccccceeeEEEeecCCCC-CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeec
Q psy9639 51 ALTYITGHMDGFLMKRGKESG-KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKD 128 (321)
Q Consensus 51 ~~~~~~~~~~G~L~K~g~~~~-~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~ 128 (321)
..|.+...+.|||.|...... -+.+||.-+. +..|.||.+ .+..++|.|++..++.+.. . .++.|+ ..
T Consensus 81 s~~isp~~~~gwldk~~pqg~~~~qkr~vkf~--~~s~~yf~~~k~py~k~~i~va~is~v~~---~-gd~kfe----vi 150 (1186)
T KOG1117|consen 81 STPISPVIKSGWLDKLSPQGEYPFQKRWVKFD--GSSLEYFLSPKDPYSKGPIPVAAISAVRN---F-GDNKFE----VI 150 (1186)
T ss_pred CCccCchhhcchhhccCcCcccccCccceecC--CCCccccCCCCCCCCCCceeeehhhhhhh---c-cCceEE----EE
Confidence 335556789999999887654 5999999998 999999999 9999999999999866432 1 233343 34
Q ss_pred CceEEEEEEeCChHHHHHHHHHHHhhhhhh-ccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCe
Q psy9639 129 GSTRHIYVYHEESQSIMNWYHAIRNAKFHR-LQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRK 207 (321)
Q Consensus 129 ~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~-l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~ 207 (321)
++.|++.|.++++.+...|+..++++-... +..+.| +..+..+.|||.-+|.+. |-|.+|.++.
T Consensus 151 tn~r~fvfr~e~~~~r~~w~s~l~s~~~~Q~l~~ap~----------pp~pP~raG~lelrg~ka-----k~f~~vsp~~ 215 (1186)
T KOG1117|consen 151 TNQRTFVFRQESEGERFIWVSPLQSALKEQRLRSAPP----------PPVPPPRAGWLELRGFKA-----KLFVAVSPER 215 (1186)
T ss_pred ecceEEEEecCCcccceeeechhhhcchhhhhccCCC----------CCCCCCCccchhcccccc-----ceeEEecCce
Confidence 567999999999999999999988764322 222211 123467899999887665 5678899999
Q ss_pred eEeeeCCCCCCcce--eEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhcccccccc
Q psy9639 208 LMYHEEPLSAYPKG--EIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFTFTLKT 285 (321)
Q Consensus 208 L~Yyk~~~~~~~~g--~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~ 285 (321)
+..|++.++- +.| .-++.. +++.|.+. ....|.+.||.|.|.|.|+++.+++.|+.|++.+|..++++
T Consensus 216 vqL~knlq~f-~lgigit~I~m--~~~nvk~v-------dr~sfdl~Tp~r~fsftaese~erq~w~ea~q~siAeTlSd 285 (1186)
T KOG1117|consen 216 VQLYKNLQSF-PLGIGITFIYM--EVSNVKEV-------DRRSFDLNTPYREFSFTAESETERQIWGEAPQPSIAETLSD 285 (1186)
T ss_pred eeeecccccc-cCCceeEEEec--cccccccc-------ccceeccCCceeeeeeeeccchhhhhhhhccCcccccccCh
Confidence 9999998773 433 222211 33444332 23679999999999999999999999999999999877776
Q ss_pred C--------ceEEEEecCCHHHHHHHH
Q psy9639 286 P--------QRWYQFSALSAPDRDQWI 304 (321)
Q Consensus 286 ~--------~~~~~l~a~s~~e~~~Wi 304 (321)
. ....+.||+...-+-+|.
T Consensus 286 ~evaeriW~ne~nr~cadC~ssrPdwa 312 (1186)
T KOG1117|consen 286 YEVAERIWLNEENRECADCGSSRPDWA 312 (1186)
T ss_pred HHHHHHHHhccccccccccCCCCCccc
Confidence 4 223456666666666664
No 50
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.52 E-value=3.6e-13 Score=102.06 Aligned_cols=96 Identities=31% Similarity=0.570 Sum_probs=73.9
Q ss_pred ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR 256 (321)
Q Consensus 180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r 256 (321)
+++|||.+++......|++|||+|.++.|.||+++.+ ..+.+.|+|.. +.|............++|.|.++.+
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~----~~v~~~~~~~~~~~~~~f~l~~~~~ 77 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSG----ITVREAPDPDSAKKPHCFEIKTADR 77 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEECCEEEEEeCCCccccCCCceEEECCc----CEEEeCCCCccCCCceEEEEEecCC
Confidence 5799999988722368999999999999999998865 46789999965 3444332111123578999998877
Q ss_pred -EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 257 -WYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 257 -~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|+|+|+|+++++.|+.+|+.++
T Consensus 78 ~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 78 RSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred ceEEEEcCCHHHHHHHHHHHHHhh
Confidence 99988888888888888887754
No 51
>KOG1117|consensus
Probab=99.50 E-value=2.1e-13 Score=134.78 Aligned_cols=258 Identities=18% Similarity=0.291 Sum_probs=165.6
Q ss_pred cccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC--------------------------------
Q psy9639 3 QIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE-------------------------------- 50 (321)
Q Consensus 3 ~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~-------------------------------- 50 (321)
.+||.++|..|-.++|++- --.++.+-.-|.+||.+||....|-.+-
T Consensus 358 vlgn~~an~Fwa~nl~~~e-~lh~dssp~~r~~fi~~Kykeg~fRk~~~~~~~~sel~kalcaaV~~pdl~etma~l~sg 436 (1186)
T KOG1117|consen 358 VLGNPRANRFWAGNLPPNE-HLHPDSSPSTRRQFIKEKYKEGKFRKEHPVEICSSELPKALCAAVNVPDLLETMALLFSG 436 (1186)
T ss_pred eecCcccccccccCCCCcc-ccCCCCCcchhhhHHHHHhhccccccccccccccccCChhheeeeeCCchhhHHHHhhcc
Confidence 4799999999999999863 2345666678899999999988886322
Q ss_pred ------------Ccccccc-------------------------cee------------eEEEeecCCC----------C
Q psy9639 51 ------------ALTYITG-------------------------HMD------------GFLMKRGKES----------G 71 (321)
Q Consensus 51 ------------~~~~~~~-------------------------~~~------------G~L~K~g~~~----------~ 71 (321)
..||+.+ .++ |+|++.-... .
T Consensus 437 a~v~~f~gd~~~~tp~~~a~~aGqslqmefl~~n~~s~~p~~ds~kel~~~~s~s~~~~~fLyc~~sa~~kl~~drr~~E 516 (1186)
T KOG1117|consen 437 ADVMCFTGDPVHSTPYLLAKKAGQSLQMEFLYHNKFSDFPQHDSHKELSQEYSQSTFLCGFLYCAPSAASKLSSDRRLRE 516 (1186)
T ss_pred ccceeecCCCCCCCCcchhhccccchhheeeeccccccCCCccccchhhhhccccccccceeeechhhccCCCChhhhcc
Confidence 0033322 223 7777754433 2
Q ss_pred CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEee-cCceEEEEEEeCChHHHHHHH
Q psy9639 72 KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMK-DGSTRHIYVYHEESQSIMNWY 148 (321)
Q Consensus 72 ~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~-~~~~R~~~l~a~s~~e~~~W~ 148 (321)
...++||||. ++.|.||.+ ....|.|.|.+.++.+.. .|.......||-+.|+. -.+.|.+.|.+++++++..|.
T Consensus 517 e~nr~wcVlg--~g~ls~fen~~S~tP~~lI~~~Eivclav~~pd~~pn~~~~f~fE~~l~~er~~~fgle~ad~l~~wt 594 (1186)
T KOG1117|consen 517 ETNRKWCVLG--GGFLSYFENEKSTTPNGLININEIVCLAVHPPDTYPNTGFIFIFEIYLPGERVFLFGLETADALRKWT 594 (1186)
T ss_pred cCCCceEEcC--cchhhhhhhcCCCCCCceeeccceEEEeecCCCCCCCcCceeEEEEeecccceEEeecccHHHHHHHH
Confidence 3668999998 899999999 999999999999985543 34333344578777776 345699999999999999999
Q ss_pred HHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccc
Q psy9639 149 HAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHC 228 (321)
Q Consensus 149 ~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~ 228 (321)
.+|...- .|... ...+..+...-|-|.-+.......|++-||.++|..|..--.... .+...+.|...
T Consensus 595 ~aiaKhf-------vp~~~----e~l~a~~~~llg~l~~kd~~~~~~~r~gwfsl~gssl~~~~~~~~-ve~d~~hlrrl 662 (1186)
T KOG1117|consen 595 EAIAKHF-------VPLFA----ENLLAADYDLLGRLFYKDCHALDQARKGWFSLDGSSLHFCLQMQP-VEEDRMHLRRL 662 (1186)
T ss_pred HHHHHhc-------CchHH----HHhccchhhhhhhhhhcChhhhhhccccceecCCCeeEEecCCCc-CchhHHHHHHH
Confidence 9986431 12211 112334555667776665555578999999999999876433211 11111223222
Q ss_pred cCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 229 SDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 229 ~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
.+ .++.... ....+.-.|.|+..+||.|++.++.-+..-|..||..|
T Consensus 663 qE-lsi~s~~--~n~~K~~~l~lve~grTLYI~g~~rldft~W~~AIeka 709 (1186)
T KOG1117|consen 663 QE-LSISSMV--QNGEKLDVLVLVEKGRTLYIQGETRLDFTVWHTAIEKA 709 (1186)
T ss_pred HH-Hhhhhcc--CCcccccceEEEeeccEEEEecCCcchHHHHHHHHHHH
Confidence 12 1111111 11123446999999999994444444444444444443
No 52
>PF15409 PH_8: Pleckstrin homology domain
Probab=99.48 E-value=2.9e-13 Score=101.15 Aligned_cols=87 Identities=21% Similarity=0.365 Sum_probs=68.6
Q ss_pred eEEEee-cCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEe
Q psy9639 61 GFLMKR-GKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYH 138 (321)
Q Consensus 61 G~L~K~-g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a 138 (321)
|||.|+ ....++|++|||||+...|.|.||.+ .+..+.|.|+|....+...+ .... +.++++...+++.|
T Consensus 1 G~llKkrr~~lqG~~kRyFvL~~~~G~LsYy~~~~~~~~rGsi~v~~a~is~~~----~~~~----I~idsg~~i~hLKa 72 (89)
T PF15409_consen 1 GWLLKKRRKPLQGWHKRYFVLDFEKGTLSYYRNQNSGKLRGSIDVSLAVISANK----KSRR----IDIDSGDEIWHLKA 72 (89)
T ss_pred CcceeeccccCCCceeEEEEEEcCCcEEEEEecCCCCeeEeEEEccceEEEecC----CCCE----EEEEcCCeEEEEEc
Confidence 788877 45568899999999434999999999 77789999999988443321 2222 34567789999999
Q ss_pred CChHHHHHHHHHHHhhh
Q psy9639 139 EESQSIMNWYHAIRNAK 155 (321)
Q Consensus 139 ~s~~e~~~W~~aLr~a~ 155 (321)
.|+++...|+++|+.++
T Consensus 73 ~s~~~f~~Wv~aL~~a~ 89 (89)
T PF15409_consen 73 KSQEDFQRWVSALQKAK 89 (89)
T ss_pred CCHHHHHHHHHHHHhcC
Confidence 99999999999998763
No 53
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.47 E-value=7.4e-13 Score=102.73 Aligned_cols=91 Identities=24% Similarity=0.387 Sum_probs=73.5
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C-----CCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E-----KKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST 131 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~-----~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 131 (321)
.++|||.|.|+..+.|+.|||.|. ++.|.|++. . .-.+++.|+|.++.+. .+.....+|+|+|. +..
T Consensus 3 ikeG~L~K~~~~~~~~k~RyffLF--nd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~-~~~~~~~~~~F~I~----~~~ 75 (101)
T cd01219 3 LKEGSVLKISSTTEKTEERYLFLF--NDLLLYCVPRKMIGGSKFKVRARIDVSGMQVC-EGDNLERPHSFLVS----GKQ 75 (101)
T ss_pred ccceEEEEEecCCCCceeEEEEEe--CCEEEEEEcccccCCCcEEEEEEEecccEEEE-eCCCCCcCceEEEe----cCC
Confidence 579999999999999999999999 779999985 2 1256788999998553 33233467887763 566
Q ss_pred EEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 132 RHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 132 R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
|+++++|+|++|+.+|+.+|..+.
T Consensus 76 rsf~l~A~s~eEk~~W~~ai~~~i 99 (101)
T cd01219 76 RCLELQARTQKEKNDWVQAIFSII 99 (101)
T ss_pred cEEEEEcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999998763
No 54
>cd01263 PH_anillin Anillin Pleckstrin homology (PH) domain. Anillin Pleckstrin homology (PH) domain. Anillin is an actin binding protein involved in cytokinesis. It has a C-terminal PH domain, which has been shown to be necessary, but not sufficient for targetting of anillin to ectopic septin containing foci . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.44 E-value=8.3e-13 Score=105.11 Aligned_cols=93 Identities=19% Similarity=0.386 Sum_probs=70.0
Q ss_pred eeeEEEe-e-cCCCCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEec---c-CCCCCCceeEEEEeec
Q psy9639 59 MDGFLMK-R-GKESGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIA---P-SKIEHPHSLQLTFMKD 128 (321)
Q Consensus 59 ~~G~L~K-~-g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~---~-~~~~~~~~~~i~~~~~ 128 (321)
..|||.- + .+..++|+||||||. ++.|.||+. ++ ..|.|.|+|.++...-. | +....+|.|.|.....
T Consensus 3 ~~GfL~~~q~~~~~k~W~RRWFvL~--g~~L~y~k~p~d~~~~~Plg~I~L~~c~~~~v~~~~r~~c~Rp~tF~i~~~~~ 80 (122)
T cd01263 3 YHGFLTMFEDTSGFGAWHRRWCALE--GGEIKYWKYPDDEKRKGPTGLIDLSTCTSSEGASAVRDICARPNTFHLDVWRP 80 (122)
T ss_pred cceeEEEEeccCCCCCceEEEEEEe--CCEEEEEcCCCccccCCceEEEEhhhCcccccccCChhhcCCCCeEEEEEecc
Confidence 4799984 3 345689999999999 999999997 44 78999999999854321 1 2456888888864321
Q ss_pred ---------------CceEE-EEEEeCChHHHHHHHHHHHh
Q psy9639 129 ---------------GSTRH-IYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 129 ---------------~~~R~-~~l~a~s~~e~~~W~~aLr~ 153 (321)
.-.|+ ++|.|||.+++.+|+.+|..
T Consensus 81 ~~~~~~~~~~~~~~~~~~r~~~~lsaDt~eer~~W~~ain~ 121 (122)
T cd01263 81 KMETDDETLVSQCRRGIERLRVMLSADTKEERQTWLSLLNS 121 (122)
T ss_pred cccccccceeeccCCceeEEEEEEecCCHHHHHHHHHHHhc
Confidence 11244 46889999999999999975
No 55
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.44 E-value=1.1e-12 Score=103.94 Aligned_cols=93 Identities=17% Similarity=0.234 Sum_probs=67.2
Q ss_pred eEEEEEEe------CCC---CCCCcceEEEEEeCCeeEeeeCCCC-------CCcceeEEcccccCceEEecCCCCCCCC
Q psy9639 181 REGWLWKT------GPK---NADAYRKRWFTLDYRKLMYHEEPLS-------AYPKGEIFLGHCSDGYTVRLGVPPGAKD 244 (321)
Q Consensus 181 k~G~L~K~------g~~---~~~~WkkRwfvL~~~~L~Yyk~~~~-------~~~~g~i~L~~~~~~~~V~~~~~~~~~~ 244 (321)
|+|+|..+ |.+ +.+.|+++||||+|+.|+.|+++.. ......|.|..+ .+.... ....
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a----~~~ia~--dy~K 75 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHA----LATRAS--DYSK 75 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEECCEEEEEccCcccccccccccccceEEeccc----eeEeec--cccC
Confidence 57888643 111 2379999999999999999999854 234456777542 222221 2235
Q ss_pred CCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 245 QGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 245 ~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+++.|.|.+++ +.|.|+|.+.+||+.||.+|+.++
T Consensus 76 r~~VF~L~~~~g~~~lfqA~~~ee~~~Wi~~I~~~~ 111 (117)
T cd01230 76 KPHVFRLRTADWREFLFQTSSLKELQSWIERINVVA 111 (117)
T ss_pred CCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 78999999975 999988888888888888888765
No 56
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.40 E-value=2.3e-12 Score=103.20 Aligned_cols=90 Identities=18% Similarity=0.300 Sum_probs=68.9
Q ss_pred eeeEEEeecCCC------C------------CceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEecc-------
Q psy9639 59 MDGFLMKRGKES------G------------KYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAP------- 112 (321)
Q Consensus 59 ~~G~L~K~g~~~------~------------~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~------- 112 (321)
||||++|+++.. . .|++|||||+ ++.|.||++ .+..|+|+|.|...-.+-..
T Consensus 1 keG~i~kr~g~~~~~~~~~~~~~~~~~~~~~~w~kRWFvlr--~s~L~Y~~~~~~~~~~~vil~D~~f~v~~~~~~~~~~ 78 (121)
T cd01254 1 KEGYIMKRSGGKRSGSDDCSFGCCCFCRMCDRWQKRWFIVK--ESFLAYMDDPSSAQILDVILFDVDFKVNGGGKEDISL 78 (121)
T ss_pred CCceEEeCCCCCcCCcccccccccCCcccccCCcceeEEEe--CCEEEEEcCCCCCceeeEEEEcCCccEEeCCcccccc
Confidence 589999986541 1 6999999999 999999999 88999999999654222111
Q ss_pred -----CCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 113 -----SKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 113 -----~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
+..+..++| .+.++.|+|.|.|+|+.++.+|+++|+.|
T Consensus 79 ~~~~~~~~~~~~~~----~i~t~~R~~~l~a~s~~~~~~Wi~~i~~a 121 (121)
T cd01254 79 AVELKDITGLRHGL----KITNSNRSLKLKCKSSRKLKQWMASIEDA 121 (121)
T ss_pred cccccccCCCceEE----EEEcCCcEEEEEeCCHHHHHHHHHHHHhC
Confidence 112334444 44678899999999999999999999753
No 57
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=99.40 E-value=1.5e-12 Score=102.94 Aligned_cols=93 Identities=22% Similarity=0.397 Sum_probs=52.3
Q ss_pred eeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCC--------CceeEEeccceEEEeccC---------CCCCCc
Q psy9639 59 MDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKK--------EPKATLRISELNVVIAPS---------KIEHPH 119 (321)
Q Consensus 59 ~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~--------~pkg~I~l~~~~~~~~~~---------~~~~~~ 119 (321)
++|||.|.+.. .++|++|||+|.. ++.|.||+. .+. .+..++...+........ ..+..+
T Consensus 1 k~G~l~K~~~~~~kgWk~RwFiL~k-~~~L~YyK~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (112)
T PF15413_consen 1 KEGYLYKWGNKFGKGWKKRWFILRK-DGVLSYYKIPRDKKDVRIIGEESSRVIRKGDWSISRRSSRIQGIKDKNPFGEIH 79 (112)
T ss_dssp EEEEEEE--TTS-S--EEEEEEEE--TTEEEEESS-------------TT-SB-SEEEE---GGGT-EEEES-T--SS-S
T ss_pred CCceEEEecCCCCcCccccEEEEEe-CCEEEEeecccccccccccccchhceEeecccCcccccccccccccCCcccCcC
Confidence 68999999998 8999999999986 899999998 221 122222222221111100 011111
Q ss_pred eeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 120 SLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 120 ~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
... +.+.+++|+|+|++++.+|+.+|+++|+.|
T Consensus 80 ~~~--~~i~T~~kt~~l~~~t~~d~~~Wi~aL~~~ 112 (112)
T PF15413_consen 80 LKV--FSIFTPTKTFHLRCETREDRYDWIEALQEA 112 (112)
T ss_dssp SEE--EEEE-SS-EEEEEESSHHHHHHHHHHHHH-
T ss_pred CCC--cEEECCCcEEEEEECCHHHHHHHHHHHHhC
Confidence 111 234577899999999999999999999864
No 58
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.37 E-value=5.7e-12 Score=94.45 Aligned_cols=92 Identities=33% Similarity=0.554 Sum_probs=71.6
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-e
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-R 256 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r 256 (321)
++|||.++.......|++|||+|.++.|.+|+...+ ..+.+.|+|.. +.|.... ......++|.|.+.. +
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~----~~v~~~~--~~~~~~~~f~i~~~~~~ 74 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSG----AEVEESP--DDSGRKNCFEIRTPDGR 74 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCC----CEEEECC--CcCCCCcEEEEecCCCc
Confidence 379998876542258999999999999999998876 67899999964 4454432 211357899999876 9
Q ss_pred EEEEEcCCHHHHHHHHHHHhhc
Q psy9639 257 WYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 257 ~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
.|+|+|+|++++..|+.+|+.+
T Consensus 75 ~~~~~~~s~~~~~~W~~~l~~~ 96 (96)
T cd00821 75 SYLLQAESEEEREEWIEALQSA 96 (96)
T ss_pred EEEEEeCCHHHHHHHHHHHhcC
Confidence 9998888888888888888764
No 59
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.35 E-value=6.8e-12 Score=97.79 Aligned_cols=90 Identities=14% Similarity=0.343 Sum_probs=65.8
Q ss_pred eeeEEEee------cC--CCCCceeeEEEEeccCCeEEeecC-CCC--Ccee--EEeccceEEEeccCCCCCCceeEEEE
Q psy9639 59 MDGFLMKR------GK--ESGKYHPRRFVLNEINDTIKYYVK-EKK--EPKA--TLRISELNVVIAPSKIEHPHSLQLTF 125 (321)
Q Consensus 59 ~~G~L~K~------g~--~~~~wk~R~fvL~~~~~~L~Yy~~-~~~--~pkg--~I~l~~~~~~~~~~~~~~~~~~~i~~ 125 (321)
++|+|..+ |+ ..+.|++|||||. ++.|.||++ ... .+.+ .|+|.++.+.+.++...+++.|.|..
T Consensus 1 ~~g~l~rk~~~~~~g~~~~~~~Wk~r~~vL~--~~~L~~ykd~~~~~~~~~~~~~i~l~~~~i~~~~~~~k~~~~F~l~~ 78 (104)
T cd01253 1 MEGSLERKHELESGGKKASNRSWDNVYGVLC--GQSLSFYKDEKMAAENVHGEPPVDLTGAQCEVASDYTKKKHVFRLRL 78 (104)
T ss_pred CCceEeEEEEeecCCcccCCCCcceEEEEEe--CCEEEEEecCcccccCCCCCCcEeccCCEEEecCCcccCceEEEEEe
Confidence 46777732 21 3578999999999 999999998 432 3445 67776665555544445678888753
Q ss_pred eecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 126 MKDGSTRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
...+.|+|+|+|.+++.+|+.+|+.
T Consensus 79 ---~~~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 79 ---PDGAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred ---cCCCEEEEECCCHHHHHHHHHHHhc
Confidence 2348899999999999999999975
No 60
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.33 E-value=7.1e-12 Score=96.25 Aligned_cols=83 Identities=14% Similarity=0.301 Sum_probs=60.4
Q ss_pred CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCC--CCCCceeEEEEeecCceEEEEEEeCChHHHHH
Q psy9639 70 SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSK--IEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN 146 (321)
Q Consensus 70 ~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~--~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~ 146 (321)
.++||+|||+|. ++.|.||++ ++..+.|+|.|....+++.|+. ....+++.+....+.+.|.|+|.++|++++.+
T Consensus 17 ~K~~KrrwF~lk--~~~L~YyK~kee~~~~p~i~lnl~gcev~~dv~~~~~kf~I~l~~ps~~~~r~y~l~cdsEeqya~ 94 (106)
T cd01237 17 LKGYKQYWFTFR--DTSISYYKSKEDSNGAPIGQLNLKGCEVTPDVNVAQQKFHIKLLIPTAEGMNEVWLRCDNEKQYAK 94 (106)
T ss_pred hhhheeEEEEEe--CCEEEEEccchhcCCCCeEEEecCceEEcccccccccceEEEEecCCccCCeEEEEECCCHHHHHH
Confidence 366999999999 999999999 6655666666665555555553 12234444422224456999999999999999
Q ss_pred HHHHHHhh
Q psy9639 147 WYHAIRNA 154 (321)
Q Consensus 147 W~~aLr~a 154 (321)
||.++|.|
T Consensus 95 Wmaa~rla 102 (106)
T cd01237 95 WMAACRLA 102 (106)
T ss_pred HHHHHHHh
Confidence 99999865
No 61
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.31 E-value=5.4e-11 Score=89.69 Aligned_cols=91 Identities=27% Similarity=0.462 Sum_probs=71.4
Q ss_pred EEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCCCcc-eeEEcccccCceEEecCCCCCCCCCCceEEEEeC---
Q psy9639 182 EGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSAYPK-GEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--- 254 (321)
Q Consensus 182 ~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~~~~-g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--- 254 (321)
+|||.+++... ...|++|||+|.++.|.||+.+.+..+. +.+++..+ .|.... ...+.+++|.|.+.
T Consensus 2 ~g~l~~~~~~~~~~~~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~----~v~~~~--~~~~~~~~F~i~~~~~~ 75 (99)
T cd00900 2 EGYLLKLGSDDVSKGKRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEI----SVEEDP--DGSDDPNCFAIVTKDRG 75 (99)
T ss_pred ccEEEEeCCCccccccCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccce----EEEECC--CCCCCCceEEEECCCCC
Confidence 68999887663 2689999999999999999999877666 78888654 243322 11145789999987
Q ss_pred CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 255 QRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 255 ~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
.+.++|+|+|+++++.|+.+|+++
T Consensus 76 ~~~~~~~~~~~~~~~~W~~al~~~ 99 (99)
T cd00900 76 RRVFVFQADSEEEAQEWVEALQQA 99 (99)
T ss_pred cEEEEEEcCCHHHHHHHHHHHhcC
Confidence 799998888888888888888764
No 62
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.30 E-value=2.1e-11 Score=91.12 Aligned_cols=92 Identities=23% Similarity=0.386 Sum_probs=69.5
Q ss_pred ceeeEEEeecCC--CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEE-eccCCCCCCceeEEEEeecC----
Q psy9639 58 HMDGFLMKRGKE--SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVV-IAPSKIEHPHSLQLTFMKDG---- 129 (321)
Q Consensus 58 ~~~G~L~K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~-~~~~~~~~~~~~~i~~~~~~---- 129 (321)
++.|||.-.... .++-|+|||||. +++|.||++ ++++|+++|+|.++..- +...-.+.+|+|.+ |..++
T Consensus 2 irkgwl~~~n~~~m~ggsK~~WFVLt--~~~L~wykd~eeKE~kyilpLdnLk~Rdve~gf~sk~~~FeL-fnpd~rnvy 78 (110)
T cd01256 2 IRKGWLSISNVGIMKGGSKDYWFVLT--SESLSWYKDDEEKEKKYMLPLDGLKLRDIEGGFMSRNHKFAL-FYPDGRNVY 78 (110)
T ss_pred eeeeeEEeeccceecCCCcceEEEEe--cceeeeecccccccccceeeccccEEEeecccccCCCcEEEE-EcCcccccc
Confidence 567998865533 356899999999 999999999 99999999999998542 22223567788887 44332
Q ss_pred -ceEEEEEEeCChHHHHHHHHHHH
Q psy9639 130 -STRHIYVYHEESQSIMNWYHAIR 152 (321)
Q Consensus 130 -~~R~~~l~a~s~~e~~~W~~aLr 152 (321)
..+++-+.|++.++++.|-.++-
T Consensus 79 kd~k~lel~~~~~e~vdswkasfl 102 (110)
T cd01256 79 KDYKQLELGCETLEEVDSWKASFL 102 (110)
T ss_pred cchheeeecCCCHHHHHHHHHHHH
Confidence 12445599999999999987653
No 63
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=99.28 E-value=8e-11 Score=88.99 Aligned_cols=91 Identities=27% Similarity=0.510 Sum_probs=72.5
Q ss_pred ceeeEEEeecC-CCCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEeccCCC--CCCceeEEEEeecCc
Q psy9639 58 HMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIAPSKI--EHPHSLQLTFMKDGS 130 (321)
Q Consensus 58 ~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~~~~~--~~~~~~~i~~~~~~~ 130 (321)
.++|||.+++. ....|++|||+|. ++.|.||++ .+ ..+.+.|+|.++.+...+... +.+++|.|.. .
T Consensus 2 ~~~G~l~~~~~~~~~~~~~~~~~L~--~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~~~f~l~~----~ 75 (102)
T smart00233 2 IKEGWLYKKSGGKKKSWKKRYFVLF--NSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPDSAKKPHCFEIKT----A 75 (102)
T ss_pred ceeEEEEEeCCCccCCceEEEEEEE--CCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCccCCCceEEEEEe----c
Confidence 47999999997 6688999999999 899999998 44 688999999999554433221 3556666542 2
Q ss_pred e-EEEEEEeCChHHHHHHHHHHHhh
Q psy9639 131 T-RHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 131 ~-R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
+ .+++|.++|++++.+|+.+|+.+
T Consensus 76 ~~~~~~f~~~s~~~~~~W~~~i~~~ 100 (102)
T smart00233 76 DRRSYLLQAESEEEREEWVDALRKA 100 (102)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHHh
Confidence 3 48999999999999999999865
No 64
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.26 E-value=9.7e-11 Score=90.27 Aligned_cols=90 Identities=21% Similarity=0.278 Sum_probs=67.1
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCC---CceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKK---EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~---~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R 132 (321)
.+||+|+|.++. +.|. |+|.|. ++.|.|+.. .+. .+.|.|+|.++.+.-.++..+.+|+|+|. ++.+
T Consensus 3 ikEG~L~K~~~k-~~~~-R~~FLF--nD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~~~~~~~~~~~F~I~----~~~k 74 (99)
T cd01220 3 IRQGCLLKLSKK-GLQQ-RMFFLF--SDLLLYTSKSPTDQNSFRILGHLPLRGMLTEESEHEWGVPHCFTIF----GGQC 74 (99)
T ss_pred eeEEEEEEEeCC-CCce-EEEEEc--cceEEEEEeecCCCceEEEEEEEEcCceEEeeccCCcCCceeEEEE----cCCe
Confidence 579999999875 3455 555555 577888765 333 58899999999643322223457888774 6779
Q ss_pred EEEEEeCChHHHHHHHHHHHhhh
Q psy9639 133 HIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
.+.|+|.|++|+.+|+.+|..+.
T Consensus 75 s~~l~A~s~~Ek~~Wi~~i~~aI 97 (99)
T cd01220 75 AITVAASTRAEKEKWLADLSKAI 97 (99)
T ss_pred EEEEECCCHHHHHHHHHHHHHHh
Confidence 99999999999999999998763
No 65
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.23 E-value=6.7e-11 Score=88.52 Aligned_cols=90 Identities=23% Similarity=0.434 Sum_probs=72.8
Q ss_pred eeeEEEeecCCC-CCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639 59 MDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH 133 (321)
Q Consensus 59 ~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~ 133 (321)
++|||.+++... ..|++|||+|. ++.|.+|.. .+ ..|.+.|+|.+......+...+.+++|.|... +++.
T Consensus 1 ~~G~l~~~~~~~~~~w~~~~~~L~--~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~~~~~~f~i~~~---~~~~ 75 (96)
T cd00821 1 KEGYLLKKTGKLRKGWKRRWFVLF--NDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDDSGRKNCFEIRTP---DGRS 75 (96)
T ss_pred CcchhhhhhChhhCCccEEEEEEE--CCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCcCCCCcEEEEecC---CCcE
Confidence 479999988776 88999999999 899999988 54 79999999999765544433335778877532 2288
Q ss_pred EEEEeCChHHHHHHHHHHHh
Q psy9639 134 IYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 134 ~~l~a~s~~e~~~W~~aLr~ 153 (321)
++|+++|++++.+|+.+|+.
T Consensus 76 ~~~~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 76 YLLQAESEEEREEWIEALQS 95 (96)
T ss_pred EEEEeCCHHHHHHHHHHHhc
Confidence 99999999999999999975
No 66
>KOG1090|consensus
Probab=99.20 E-value=4.8e-12 Score=126.78 Aligned_cols=100 Identities=34% Similarity=0.520 Sum_probs=79.4
Q ss_pred hCCCcceEEEEEEeCCCCCCCcceEEEEEe--CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639 175 LTRDFGREGWLWKTGPKNADAYRKRWFTLD--YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK 252 (321)
Q Consensus 175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~--~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~ 252 (321)
.+.+-+.+|+|+|+|... |.||.|||||+ ...|.||++..+..|+|.|+|..... |....++.. +.+--|++.
T Consensus 1630 ~teNr~~eG~LyKrGA~l-K~Wk~RwFVLd~~khqlrYYd~~edt~pkG~IdLaeves---v~~~~~k~v-dekgffdlk 1704 (1732)
T KOG1090|consen 1630 PTENRIPEGYLYKRGAKL-KLWKPRWFVLDPDKHQLRYYDDFEDTKPKGCIDLAEVES---VALIGPKTV-DEKGFFDLK 1704 (1732)
T ss_pred cccccCcccchhhcchhh-cccccceeEecCCccceeeecccccccccchhhhhhhhh---hcccCcccc-Cccceeeee
Confidence 345567799999999998 99999999998 67899999999999999999976532 333333333 334469999
Q ss_pred eCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 253 TPQRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 253 t~~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
|..|+|.|+|.+-..+++|++.|++|+
T Consensus 1705 tt~rvynf~a~nin~AqqWve~iqscl 1731 (1732)
T KOG1090|consen 1705 TTNRVYNFCAQNINLAQQWVECIQSCL 1731 (1732)
T ss_pred hhhHHHHHHhccchHHHHHHHHHHHhh
Confidence 999999988888888888887777765
No 67
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.18 E-value=2.8e-10 Score=88.18 Aligned_cols=95 Identities=20% Similarity=0.195 Sum_probs=67.0
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC---CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP---LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT 253 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~---~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t 253 (321)
+.++++|-|.|... +.-+.|+|.|-++.|.|-+-. ......+.|+|. ++.|.... +....+++|.|.+
T Consensus 2 R~li~eG~L~K~~r---k~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~----~~~v~~~~--d~~~~~n~f~I~~ 72 (104)
T cd01218 2 RVLVGEGVLTKMCR---KKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLE----GVQVESIE--DDGIERNGWIIKT 72 (104)
T ss_pred CEEEecCcEEEeec---CCCceEEEEEecCEEEEEEeecCCceeeEeeEEEcc----ceEEEecC--CcccccceEEEec
Confidence 35689999999984 467889999999999996432 122346788984 45565432 2223578999999
Q ss_pred CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639 254 PQRWYQFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 254 ~~r~~~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
+.++|.++|+|++|+.+||++|+.||.
T Consensus 73 ~~kSf~v~A~s~~eK~eWl~~i~~ai~ 99 (104)
T cd01218 73 PTKSFAVYAATETEKREWMLHINKCVT 99 (104)
T ss_pred CCeEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 999999666666666666666666653
No 68
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=99.18 E-value=3.8e-10 Score=84.97 Aligned_cols=92 Identities=24% Similarity=0.491 Sum_probs=72.7
Q ss_pred eeeEEEeecCCC----CCceeeEEEEeccCCeEEeecC-CCCCce-eEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639 59 MDGFLMKRGKES----GKYHPRRFVLNEINDTIKYYVK-EKKEPK-ATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 59 ~~G~L~K~g~~~----~~wk~R~fvL~~~~~~L~Yy~~-~~~~pk-g~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R 132 (321)
.+|||.+++... +.|++|||+|. ++.|.||.. .+..+. +.+++..+.+...+...+.+++|+|... ++..+
T Consensus 1 ~~g~l~~~~~~~~~~~~~w~~~~~~l~--~~~l~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~~~~F~i~~~-~~~~~ 77 (99)
T cd00900 1 KEGYLLKLGSDDVSKGKRWKRRWFFLF--DDGLLLYKSDDKKEIKPGSIPLSEISVEEDPDGSDDPNCFAIVTK-DRGRR 77 (99)
T ss_pred CccEEEEeCCCccccccCceeeEEEEE--CCEEEEEEcCCCCcCCCCEEEccceEEEECCCCCCCCceEEEECC-CCCcE
Confidence 379999999875 78999999999 899999999 666666 7999999873333322356788877532 11368
Q ss_pred EEEEEeCChHHHHHHHHHHHh
Q psy9639 133 HIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~ 153 (321)
.++|++++.+++..|+.+|+.
T Consensus 78 ~~~~~~~~~~~~~~W~~al~~ 98 (99)
T cd00900 78 VFVFQADSEEEAQEWVEALQQ 98 (99)
T ss_pred EEEEEcCCHHHHHHHHHHHhc
Confidence 999999999999999999975
No 69
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.18 E-value=3.4e-10 Score=87.48 Aligned_cols=80 Identities=20% Similarity=0.267 Sum_probs=64.8
Q ss_pred ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCC--CCCCCCceEEEEeCCeE
Q psy9639 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP--GAKDQGFTFTLKTPQRW 257 (321)
Q Consensus 180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~--~~~~~~~~F~i~t~~r~ 257 (321)
+++|||..-..+- +.|||+|++|+...|.+|+++.+..+-..|+|+.+ .+|+.+... ..+...|||+|.|...+
T Consensus 1 lkEGWmVHyT~~d-~~rKRhYWrLDsK~Itlf~~e~~skyyKeIPLsEI---l~V~~~~~~~~~~~~~~hcFEi~T~~~v 76 (117)
T cd01239 1 LKEGWMVHYTSSD-NRRKKHYWRLDSKAITLYQEESGSRYYKEIPLAEI---LSVSSNNGDSVLAKHPPHCFEIRTTTNV 76 (117)
T ss_pred CccceEEEEecCc-cceeeeEEEecCCeEEEEEcCCCCeeeEEeehHHh---eEEeccCCCcCCCCCCCcEEEEEecCEE
Confidence 4799998776666 78999999999999999999999999999999876 556543211 11346799999999999
Q ss_pred EEEEcC
Q psy9639 258 YQFSAL 263 (321)
Q Consensus 258 ~~f~A~ 263 (321)
|++.++
T Consensus 77 Y~VG~~ 82 (117)
T cd01239 77 YFVGGE 82 (117)
T ss_pred EEeccc
Confidence 998664
No 70
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.14 E-value=9.9e-11 Score=88.24 Aligned_cols=96 Identities=24% Similarity=0.312 Sum_probs=69.7
Q ss_pred ceEEEEEEeCCCCCCCcceEEEEEeCCeeE-----eeeCCCCCCcceeEEcccccCceEEecCCCCCC--------CCCC
Q psy9639 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLM-----YHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGA--------KDQG 246 (321)
Q Consensus 180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~-----Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~--------~~~~ 246 (321)
.++|||.|.|+...+.||||||+|.+-.-+ -|.. +.+.|.-.|.| +||+|.-+++... .+..
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~qvsQYtfamcsy~e-kks~P~e~~ql----dGyTvDy~~~~~~~~~~~~~~~gg~ 77 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLVQVSQYTFAMCSYRE-KKAEPTEFIQL----DGYTVDYMPESDPDPNSELSLQGGR 77 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEEchhHHHHHHHhhhh-hcCCchhheee----cceEEeccCCCCCCcccccccccch
Confidence 489999999996669999999999965433 2333 33468888888 7899876654431 1234
Q ss_pred ceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639 247 FTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 247 ~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
+-|..+-.+.+..|+.+++.|+.-||+||-.|.+
T Consensus 78 ~ff~avkegd~~~fa~~de~~r~lwvqa~yratg 111 (117)
T cd01234 78 HFFNAVKEGDELKFATDDENERHLWVQAMYRATG 111 (117)
T ss_pred hhhheeccCcEEEEeccchHHHHHHHHHHHHHcC
Confidence 6677777778888888888888888888877654
No 71
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=99.14 E-value=3.8e-10 Score=90.13 Aligned_cols=92 Identities=23% Similarity=0.416 Sum_probs=57.1
Q ss_pred eEEEEEEe------CCC---CCCCcceEEEEEeCCeeEeeeCCC--------------CCCcceeEEcccccCceEEecC
Q psy9639 181 REGWLWKT------GPK---NADAYRKRWFTLDYRKLMYHEEPL--------------SAYPKGEIFLGHCSDGYTVRLG 237 (321)
Q Consensus 181 k~G~L~K~------g~~---~~~~WkkRwfvL~~~~L~Yyk~~~--------------~~~~~g~i~L~~~~~~~~V~~~ 237 (321)
|+|+|..+ |.+ ..++|+.-|+||+|..|++|++.. ...|.+.|.|.. +.+...
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~----a~a~~a 77 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQGGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHH----ALAEIA 77 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEETTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-----EEEEE
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEECCEEEEEccCcccccCCcccccccccCcceeEEEecc----eEEEeC
Confidence 68999853 111 347899999999999999999831 123455688854 233322
Q ss_pred CCCCCCCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 238 VPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 238 ~~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
.+-..++|+|.|.++ +..|.|+|.|+++|++||++|+-+
T Consensus 78 --~dY~Kr~~VFrL~~~dg~e~Lfqa~~~~~m~~Wi~~IN~~ 117 (119)
T PF15410_consen 78 --SDYTKRKNVFRLRTADGSEYLFQASDEEEMNEWIDAINYA 117 (119)
T ss_dssp --TTBTTCSSEEEEE-TTS-EEEEE-SSHHHHHHHHHHHHHH
T ss_pred --cccccCCeEEEEEeCCCCEEEEECCCHHHHHHHHHHHhhh
Confidence 122347899999987 589998888888888888888764
No 72
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.14 E-value=6.7e-10 Score=88.02 Aligned_cols=92 Identities=16% Similarity=0.221 Sum_probs=72.8
Q ss_pred eeeEEEee------cCC----CCCceeeEEEEeccCCeEEeecC-CC-------CCceeEEeccceEEEeccCCCCCCce
Q psy9639 59 MDGFLMKR------GKE----SGKYHPRRFVLNEINDTIKYYVK-EK-------KEPKATLRISELNVVIAPSKIEHPHS 120 (321)
Q Consensus 59 ~~G~L~K~------g~~----~~~wk~R~fvL~~~~~~L~Yy~~-~~-------~~pkg~I~l~~~~~~~~~~~~~~~~~ 120 (321)
++|+|..+ |+. ...|+++||||. ++.|..|++ .. ..+...|.|.++.+.++++...++|.
T Consensus 2 ~~g~l~RK~~~~~~~kk~~~~~R~Wk~~y~vL~--g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~ia~dy~Kr~~V 79 (117)
T cd01230 2 KHGALMRKVHADPDCRKTPFGKRSWKMFYGILR--GLVLYLQKDEHKPGKSLSETELKNAISIHHALATRASDYSKKPHV 79 (117)
T ss_pred CCcEEEEEEEecCCCccCCCCCCcceEEEEEEE--CCEEEEEccCcccccccccccccceEEeccceeEeeccccCCCcE
Confidence 67888753 222 357999999999 999999999 43 35568999999876777776778888
Q ss_pred eEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 121 LQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 121 ~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
|.|. . ...+.|.|+|.+.+|+..|+++|+.+.
T Consensus 80 F~L~-~--~~g~~~lfqA~~~ee~~~Wi~~I~~~~ 111 (117)
T cd01230 80 FRLR-T--ADWREFLFQTSSLKELQSWIERINVVA 111 (117)
T ss_pred EEEE-c--CCCCEEEEECCCHHHHHHHHHHHHHHH
Confidence 8774 2 234889999999999999999998764
No 73
>KOG1090|consensus
Probab=99.05 E-value=6.7e-11 Score=118.77 Aligned_cols=137 Identities=20% Similarity=0.380 Sum_probs=95.8
Q ss_pred HhhhccCCCCCCCCCCCCC--hHHHHHHHHHh--hhhcccccCCCccccccceeeEEEeecCCCCCceeeEEEEeccCCe
Q psy9639 11 LKYEMRVPASYKVPTSSCP--QVLLKEWIRSK--YEREEFRHPEALTYITGHMDGFLMKRGKESGKYHPRRFVLNEINDT 86 (321)
Q Consensus 11 ~~~e~~~p~~~~~p~~~~~--~~~~e~~ir~k--y~~~~f~~~~~~~~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~ 86 (321)
..|-|.=|++...|+.+.. ..--|+=.|.- --.++|+.+. -.+.+.+|+|.|||...+.|+.|||||..+...
T Consensus 1587 ~~~~a~~~~~i~ms~g~~~s~ts~a~~~arss~~tly~qf~s~~---teNr~~eG~LyKrGA~lK~Wk~RwFVLd~~khq 1663 (1732)
T KOG1090|consen 1587 HTWDAKPFEDIKMSSGAIQSGTSQAEKMARSSNNTLYRQFMSPP---TENRIPEGYLYKRGAKLKLWKPRWFVLDPDKHQ 1663 (1732)
T ss_pred eccccCCccccccCccccccccchHHHhhcCCcchhhhhhcCCc---ccccCcccchhhcchhhcccccceeEecCCccc
Confidence 4566666667776643321 11112222221 1123555543 224566999999999999999999999988999
Q ss_pred EEeecC-CCCCceeEEeccceEEEe--ccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 87 IKYYVK-EKKEPKATLRISELNVVI--APSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 87 L~Yy~~-~~~~pkg~I~l~~~~~~~--~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
|+||.+ +|+.|+|.|+|.++..+- .|...+. .|| |...+..|+|.|+|.+.....+|++.|.++
T Consensus 1664 lrYYd~~edt~pkG~IdLaevesv~~~~~k~vde-kgf---fdlktt~rvynf~a~nin~AqqWve~iqsc 1730 (1732)
T KOG1090|consen 1664 LRYYDDFEDTKPKGCIDLAEVESVALIGPKTVDE-KGF---FDLKTTNRVYNFCAQNINLAQQWVECIQSC 1730 (1732)
T ss_pred eeeecccccccccchhhhhhhhhhcccCccccCc-cce---eeeehhhHHHHHHhccchHHHHHHHHHHHh
Confidence 999999 999999999999986542 2333332 343 444567799999999999999999999765
No 74
>KOG0690|consensus
Probab=99.00 E-value=3.4e-10 Score=102.73 Aligned_cols=93 Identities=28% Similarity=0.434 Sum_probs=57.3
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCC-CCCCcceeEEcccccCceEEecCCCCC-CCCCCceEEEEe
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVRLGVPPG-AKDQGFTFTLKT 253 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~-~~~~~~g~i~L~~~~~~~~V~~~~~~~-~~~~~~~F~i~t 253 (321)
.+++++|||+|+|... ++|+.|||+|. ++.|.-|++. .+..+. .-+| +.++|..|..-. .+.+++.|-|.+
T Consensus 13 ~~vvkEgWlhKrGE~I-knWRpRYF~l~~DG~~~Gyr~kP~~~~~~-p~pL----NnF~v~~cq~m~~erPrPntFiiRc 86 (516)
T KOG0690|consen 13 EDVVKEGWLHKRGEHI-KNWRPRYFLLFNDGTLLGYRSKPKEVQPT-PEPL----NNFMVRDCQTMKTERPRPNTFIIRC 86 (516)
T ss_pred hhhHHhhhHhhcchhh-hcccceEEEEeeCCceEeeccCCccCCCC-cccc----cchhhhhhhhhhccCCCCceEEEEe
Confidence 4689999999999998 89999999996 6677766654 443222 2344 235555442111 234678888865
Q ss_pred C------CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 254 P------QRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 254 ~------~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
- +|||+ ++|++++++|+.||+.
T Consensus 87 LQWTTVIERTF~--ves~~eRq~W~~AIq~ 114 (516)
T KOG0690|consen 87 LQWTTVIERTFY--VESAEERQEWIEAIQA 114 (516)
T ss_pred eeeeeeeeeeee--cCCHHHHHHHHHHHHH
Confidence 3 47665 4444444444444444
No 75
>smart00105 ArfGap Putative GTP-ase activating proteins for the small GTPase, ARF. Putative zinc fingers with GTPase activating proteins (GAPs) towards the small GTPase, Arf. The GAP of ARD1 stimulates GTPase hydrolysis for ARD1 but not ARFs.
Probab=98.99 E-value=2.6e-10 Score=90.06 Aligned_cols=50 Identities=26% Similarity=0.339 Sum_probs=45.4
Q ss_pred CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639 1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE 50 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~ 50 (321)
|...||..||++||+++|....+|...+....+|+|||+||++++|+.++
T Consensus 59 ~~~~GN~~~n~~~e~~~~~~~~~~~~~~~~~~~~~fI~~KY~~k~f~~~~ 108 (112)
T smart00105 59 LQKGGNENANSIWESNLDDFSLKPPDSDDQQKYESFIAAKYEEKLFVPPE 108 (112)
T ss_pred HHHhhhHHHHHHHHhhCCccccCCCCCchHHHHHHHHHHHHHhhhccccc
Confidence 56789999999999999998888877778899999999999999998864
No 76
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.97 E-value=3.3e-09 Score=82.04 Aligned_cols=87 Identities=24% Similarity=0.325 Sum_probs=59.2
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCC-eeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYR-KLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ 255 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~-~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~ 255 (321)
..++++|++.|+.+.. .|+|+|+|+++ .|+|++.... ..+|.|+++.. ..|... ..-.|.|.||+
T Consensus 11 e~Il~~g~v~K~kgl~---~kkR~liLTd~PrL~Yvdp~~~-~~KGeI~~~~~---l~v~~k-------~~~~F~I~tp~ 76 (104)
T PF14593_consen 11 ELILKQGYVKKRKGLF---AKKRQLILTDGPRLFYVDPKKM-VLKGEIPWSKE---LSVEVK-------SFKTFFIHTPK 76 (104)
T ss_dssp --EEEEEEEEEEETTE---EEEEEEEEETTTEEEEEETTTT-EEEEEE--STT----EEEEC-------SSSEEEEEETT
T ss_pred CeEEEEEEEEEeeceE---EEEEEEEEccCCEEEEEECCCC-eECcEEecCCc---eEEEEc-------cCCEEEEECCC
Confidence 4679999999997654 89999999977 8888777655 67899999753 344331 22369999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 256 RWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 256 r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
|+|+|.. .+..+.+|+++|+..
T Consensus 77 RtY~l~d-~~~~A~~W~~~I~~~ 98 (104)
T PF14593_consen 77 RTYYLED-PEGNAQQWVEAIEEV 98 (104)
T ss_dssp EEEEEE--TTS-HHHHHHHHHHH
T ss_pred cEEEEEC-CCCCHHHHHHHHHHH
Confidence 9999665 334455566666553
No 77
>KOG0248|consensus
Probab=98.95 E-value=9e-10 Score=107.28 Aligned_cols=206 Identities=17% Similarity=0.224 Sum_probs=142.3
Q ss_pred cccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce
Q psy9639 55 ITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST 131 (321)
Q Consensus 55 ~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 131 (321)
..-.++|++.+.+...+.|+|||||++ .+.+.||.. .+.+|++.|++........ .+...-|| ....+
T Consensus 247 e~~ekSgy~~~~~s~~k~lkrr~~v~k--~gqi~~y~~~~~~~~~p~s~~d~~s~~~~~~---~~~s~~fq----li~~t 317 (936)
T KOG0248|consen 247 ETMEKSGYWTQLTSRIKSLKRRYVVFK--NGQISFYRKHNNRDEEPASKIDIRSVTKLEQ---QGAAYAFQ----LITST 317 (936)
T ss_pred chhhcccchhcchHHHHHHHhHheeec--cceEEEEEcCCCccccccCcccccccceeec---cchhHHhh----hhhhc
Confidence 345789999999999999999999999 999999987 5689999998776543222 12222333 34556
Q ss_pred EEEEEEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEee
Q psy9639 132 RHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYH 211 (321)
Q Consensus 132 R~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yy 211 (321)
..+++-+++.--..+|++.|..+... ++.. |.+. +. -.-+..-+|||.+.+... =++-|+.|.+-+++||
T Consensus 318 ~~~~~~~~s~~lt~dw~~iL~~~iKv-~~~~-~~a~---~~--~p~~~~~~GwlT~vk~g~---skkv~~alv~~~~~~~ 387 (936)
T KOG0248|consen 318 DKMNFMTESERTTHDWVTILSAAIKA-TTLR-EMAS---RV--TPIDASISGWLTRVKCGL---SKKVFAALVNQKLMFF 387 (936)
T ss_pred eeEEEeccChhhhhhhHHHHHHHHHH-Hhcc-chhh---hc--CCCCCCcCcceeeecccc---ceeeeeeeeeeeeEEe
Confidence 78999999999999999998766432 1111 1110 00 011234589999887543 4788999999999999
Q ss_pred eCCCCCCcceeEEcccccCceEEecCCCCC----CC----CCCceEEEEe--CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 212 EEPLSAYPKGEIFLGHCSDGYTVRLGVPPG----AK----DQGFTFTLKT--PQRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 212 k~~~~~~~~g~i~L~~~~~~~~V~~~~~~~----~~----~~~~~F~i~t--~~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
++..+..|.|..++...-.+-.+..+..+. .+ ...++.-|+. .+-+++|--.+.++.+.|+.-|..|.
T Consensus 388 k~~~d~rp~g~l~~~~~h~~ee~~s~~sde~~e~~~~r~l~~~~~~l~~~~~~~~p~yLi~~t~e~k~~wly~l~~A~ 465 (936)
T KOG0248|consen 388 KNSNDLVPNGFLCLQEKHNGTEEYSGSSDEQLETTKEHPQRKNNDSLCVQIANEDPVYLILRTSEDKEKWLYYLKSAS 465 (936)
T ss_pred ecccccccccccchhhhhcceeeccCCchhhhhhhcCccccccCceEEeccCCCCCEEEEeeeccccceeeeeehhhc
Confidence 999999999998875432221111111000 11 1246666664 36788888889999999999888875
No 78
>KOG0705|consensus
Probab=98.94 E-value=3.5e-10 Score=108.38 Aligned_cols=49 Identities=29% Similarity=0.518 Sum_probs=45.8
Q ss_pred CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639 1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE 50 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~ 50 (321)
|.++||..||++||.. -.++.||++++++++||.|||+|||.|.|.+|-
T Consensus 569 m~aiGN~~AN~vWE~~-~~G~~KPs~~s~REEkErwIr~KYeqklFLaPl 617 (749)
T KOG0705|consen 569 MSAIGNDLANSVWEGS-SQGQTKPSPDSSREEKERWIRAKYEQKLFLAPL 617 (749)
T ss_pred HHHhhhhHHHHHhhhh-ccCCcCCCccccHHHHHHHHHHHHHHHhhcCCC
Confidence 7789999999999994 588999999999999999999999999999864
No 79
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.94 E-value=1e-08 Score=78.90 Aligned_cols=96 Identities=18% Similarity=0.324 Sum_probs=66.6
Q ss_pred eEEEEEEeCCCC---CCCcceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCC-----CCCCCCCCceE
Q psy9639 181 REGWLWKTGPKN---ADAYRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGV-----PPGAKDQGFTF 249 (321)
Q Consensus 181 k~G~L~K~g~~~---~~~WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~-----~~~~~~~~~~F 249 (321)
.+|||.-....+ .++|+++|+||.+..|++|..+.+. .|..++++.. .++|+.+. ..+..+-++-|
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~~~Kl~lYd~e~~~~~~~p~~vldl~~---~fhv~~V~asDVi~a~~kDiP~IF 78 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVSSRKILFYNDEQDKENSTPSMILDIDK---LFHVRPVTQGDVYRADAKEIPKIF 78 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEeCCEEEEEecCccccCCCcEEEEEccc---eeeeecccHHHeeecCcccCCeEE
Confidence 489997543322 2589999999999999999987653 3667777754 24444321 11123457889
Q ss_pred EEEeCC--eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 250 TLKTPQ--RWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 250 ~i~t~~--r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|..++ ++.+|-|+|+.|.+.||.+|..-|
T Consensus 79 ~I~~~~~~~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 79 QILYANEARDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred EEEeCCccceEEEEeCCchHHHHHHHHHHHhc
Confidence 998754 899988888888888887776543
No 80
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.87 E-value=4.5e-08 Score=76.51 Aligned_cols=95 Identities=14% Similarity=0.158 Sum_probs=61.7
Q ss_pred ceEEEEEE--eCCCCCCCcceEEEEEeCCeeEeeeCCCCC--C----cceeEEcccccCceEEecCC-----CCCCCCCC
Q psy9639 180 GREGWLWK--TGPKNADAYRKRWFTLDYRKLMYHEEPLSA--Y----PKGEIFLGHCSDGYTVRLGV-----PPGAKDQG 246 (321)
Q Consensus 180 ~k~G~L~K--~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~--~----~~g~i~L~~~~~~~~V~~~~-----~~~~~~~~ 246 (321)
..+|||.- .++.. ++|+++|++|.+..|++|..+.+. . +.-.|++.. ..++|+.+. ..+..+-+
T Consensus 3 ~~EGwvkvP~~~~~k-rGW~r~~vVv~~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD--~~fsV~~VtasDvi~a~~kDiP 79 (122)
T cd01243 3 AYEGHVKIPKPGGVK-KGWQRALVVVCDFKLFLYDIAEDRASQPSVVISQVLDMRD--PEFSVSSVLESDVIHASKKDIP 79 (122)
T ss_pred cceeeEeccCCCCcc-cCceEEEEEEeCCEEEEEeCCccccCCccCceeEEEEcCC--CCEEEEEecHHHccccCcccCC
Confidence 35899974 33334 799999999999999999977653 2 233455532 235555422 11223457
Q ss_pred ceEEEEeC-------CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 247 FTFTLKTP-------QRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 247 ~~F~i~t~-------~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
+-|+|.+. ..+.+|-|+|+.|+++||.||..
T Consensus 80 ~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~ 117 (122)
T cd01243 80 CIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE 117 (122)
T ss_pred eEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence 88998763 37777777777777777776653
No 81
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.87 E-value=3.3e-08 Score=77.58 Aligned_cols=94 Identities=20% Similarity=0.272 Sum_probs=62.7
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC-----------CCcceeEEcccccCceEEecCCCCCCCCCC
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS-----------AYPKGEIFLGHCSDGYTVRLGVPPGAKDQG 246 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-----------~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~ 246 (321)
.++++|-|.|-+... +..+.|+|.|-++.|.|-+.... ...++.++|.. +.|... + +...-+
T Consensus 3 elI~EG~L~ki~~~~-~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~----~~V~d~-~-d~~~~k 75 (112)
T cd01261 3 EFIMEGTLTRVGPSK-KAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRK----VDINDK-P-DSSEYK 75 (112)
T ss_pred cccccCcEEEEeccc-CCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeee----eEEEEc-C-CCcccC
Confidence 468899999998766 68999999999999999885432 12345577743 444432 2 222347
Q ss_pred ceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 247 FTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 247 ~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
+.|.|.+. ++.|.|+|.|+++.++||++|..+
T Consensus 76 naF~I~~~~~~s~~l~Akt~eeK~~Wm~~l~~~ 108 (112)
T cd01261 76 NAFEIILKDGNSVIFSAKNAEEKNNWMAALISV 108 (112)
T ss_pred ceEEEEcCCCCEEEEEECCHHHHHHHHHHHHHH
Confidence 89999984 788995555555555555544443
No 82
>cd01234 PH_CADPS CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS (Ca2+-dependent activator protein) Pleckstrin homology (PH) domain. CADPS is a calcium-dependent activator involved in secretion. It contains a central PH domain that binds to phosphoinositide 4,5 bisphosphate containing liposomes. However, membrane association may also be mediated by binding to phosphatidlyserine via general electrostatic interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.82 E-value=9.9e-09 Score=77.52 Aligned_cols=94 Identities=23% Similarity=0.357 Sum_probs=62.4
Q ss_pred ceeeEEEeecC-CCCCceeeEEEEeccCCeEEe------ecCCCCCceeEEeccceEEEeccCCCCCCc-ee-----EEE
Q psy9639 58 HMDGFLMKRGK-ESGKYHPRRFVLNEINDTIKY------YVKEKKEPKATLRISELNVVIAPSKIEHPH-SL-----QLT 124 (321)
Q Consensus 58 ~~~G~L~K~g~-~~~~wk~R~fvL~~~~~~L~Y------y~~~~~~pkg~I~l~~~~~~~~~~~~~~~~-~~-----~i~ 124 (321)
.++|||+|.|+ ..+.||||||||. + .-.| |.....+|...|.|.+.++-.-+...++|+ |+ .+.
T Consensus 3 k~sGyL~k~Gg~~~KkWKKRwFvL~--q-vsQYtfamcsy~ekks~P~e~~qldGyTvDy~~~~~~~~~~~~~~~gg~~f 79 (117)
T cd01234 3 KHCGYLYAIGKNVWKKWKKRFFVLV--Q-VSQYTFAMCSYREKKAEPTEFIQLDGYTVDYMPESDPDPNSELSLQGGRHF 79 (117)
T ss_pred ceeEEEEeccchhhhhhheeEEEEE--c-hhHHHHHHHhhhhhcCCchhheeecceEEeccCCCCCCcccccccccchhh
Confidence 47999999999 6799999999997 2 2222 222567899999999986543222222222 11 111
Q ss_pred EeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 125 FMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
|......-.+.|.++++.|+.-|++++-.|
T Consensus 80 f~avkegd~~~fa~~de~~r~lwvqa~yra 109 (117)
T cd01234 80 FNAVKEGDELKFATDDENERHLWVQAMYRA 109 (117)
T ss_pred hheeccCcEEEEeccchHHHHHHHHHHHHH
Confidence 221112256889999999999999998654
No 83
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.82 E-value=3.2e-08 Score=75.88 Aligned_cols=89 Identities=20% Similarity=0.401 Sum_probs=54.3
Q ss_pred eEEEEEEeCCCCC-CCcceEEEEEeC-CeeE----eeeC-CCCC--Ccc--eeEEcccccCceEEecCCCCCCCCCCceE
Q psy9639 181 REGWLWKTGPKNA-DAYRKRWFTLDY-RKLM----YHEE-PLSA--YPK--GEIFLGHCSDGYTVRLGVPPGAKDQGFTF 249 (321)
Q Consensus 181 k~G~L~K~g~~~~-~~WkkRwfvL~~-~~L~----Yyk~-~~~~--~~~--g~i~L~~~~~~~~V~~~~~~~~~~~~~~F 249 (321)
++|||+.+..+.. -.|.+.||.... +.++ +... ..+. ... -.|.|.+ |++... ...+++|||
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~s----c~~r~~---~~~dRRFCF 73 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKS----CSRRKT---ESIDKRFCF 73 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeee----cccccc---CCccceeeE
Confidence 5899998765442 379999998874 3332 2221 1110 011 1233322 445443 223688999
Q ss_pred EEEeCCe--EEEEEcCCHHHHHHHHHHHh
Q psy9639 250 TLKTPQR--WYQFSALSAPDRDQWIQAVQ 276 (321)
Q Consensus 250 ~i~t~~r--~~~f~A~s~~e~~~Wv~aL~ 276 (321)
+|.++.+ ++.|+|+|+.++..||.|+.
T Consensus 74 ei~~~~~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 74 DVEVEEKPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred eeeecCCCCeEEEEecCHHHHHHHHHhhc
Confidence 9998876 89988888888888877764
No 84
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.81 E-value=2e-08 Score=77.35 Aligned_cols=94 Identities=19% Similarity=0.252 Sum_probs=56.2
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcce---eEEcccccCceEEecCCCCCCCCCCceEEEEeCC--
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKG---EIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-- 255 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g---~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-- 255 (321)
.+|+|+-+.... ++||||||+|+..-|+|.-......++. ...+... ++|......-.-....+|+|-|..+.
T Consensus 2 ~~g~LylK~~gk-KsWKk~~f~LR~SGLYy~~Kgksk~srdL~cl~~f~~~-nvY~~~~~kKk~kAPTd~~F~~K~~~~q 79 (114)
T cd01259 2 MEGPLYLKADGK-KSWKKYYFVLRSSGLYYFPKEKTKNTRDLACLNLLHGH-NVYTGLGWRKKYKSPTDYCFGFKAVGDQ 79 (114)
T ss_pred ccceEEEccCCC-ccceEEEEEEeCCeeEEccCCCcCCHHHHHHHHhcccC-cEEEEechhhccCCCCCceEEEeccccC
Confidence 479999887665 7999999999999999987766655542 2233222 34544321111111246888887542
Q ss_pred -----eEEEEEcCCHHHHHHHHHHHh
Q psy9639 256 -----RWYQFSALSAPDRDQWIQAVQ 276 (321)
Q Consensus 256 -----r~~~f~A~s~~e~~~Wv~aL~ 276 (321)
-.-+|+|++++.++.||.||+
T Consensus 80 ~~~s~~ik~lCaeDe~t~~~W~ta~R 105 (114)
T cd01259 80 SKGSQSIKYLCAEDLPTLDRWLTAIR 105 (114)
T ss_pred cccchhheeeccCCHHHHHHHHHHHH
Confidence 234555555555555555554
No 85
>cd01259 PH_Apbb1ip Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip (Amyloid beta (A4) Precursor protein-Binding, family B, member 1 Interacting Protein) pleckstrin homology (PH) domain. Apbb1ip consists of a Ras-associated domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.78 E-value=2.8e-08 Score=76.60 Aligned_cols=96 Identities=22% Similarity=0.380 Sum_probs=65.2
Q ss_pred eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCcee---EEeccceEE--Eec-cCCCCC--CceeEEEEee-c
Q psy9639 59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKA---TLRISELNV--VIA-PSKIEH--PHSLQLTFMK-D 128 (321)
Q Consensus 59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg---~I~l~~~~~--~~~-~~~~~~--~~~~~i~~~~-~ 128 (321)
.+|+|+-+....+.||||||+|+ ...|.|..+ +.++|+. ...+.+.++ .+. -.+.+. ++||.|--.. .
T Consensus 2 ~~g~LylK~~gkKsWKk~~f~LR--~SGLYy~~Kgksk~srdL~cl~~f~~~nvY~~~~~kKk~kAPTd~~F~~K~~~~q 79 (114)
T cd01259 2 MEGPLYLKADGKKSWKKYYFVLR--SSGLYYFPKEKTKNTRDLACLNLLHGHNVYTGLGWRKKYKSPTDYCFGFKAVGDQ 79 (114)
T ss_pred ccceEEEccCCCccceEEEEEEe--CCeeEEccCCCcCCHHHHHHHHhcccCcEEEEechhhccCCCCCceEEEeccccC
Confidence 58999988877799999999999 889988887 6677764 344444432 111 112233 4454442121 1
Q ss_pred C-ceEEE-EEEeCChHHHHHHHHHHHhhhh
Q psy9639 129 G-STRHI-YVYHEESQSIMNWYHAIRNAKF 156 (321)
Q Consensus 129 ~-~~R~~-~l~a~s~~e~~~W~~aLr~a~~ 156 (321)
+ ..|.+ +|+|+|++.+..|+.+||-++.
T Consensus 80 ~~~s~~ik~lCaeDe~t~~~W~ta~Ri~Ky 109 (114)
T cd01259 80 SKGSQSIKYLCAEDLPTLDRWLTAIRIAKY 109 (114)
T ss_pred cccchhheeeccCCHHHHHHHHHHHHHHhh
Confidence 2 13554 8999999999999999998765
No 86
>KOG3531|consensus
Probab=98.75 E-value=5.1e-09 Score=104.17 Aligned_cols=209 Identities=21% Similarity=0.346 Sum_probs=143.9
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecCC-CC----CceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKE-KK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~-~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R 132 (321)
+.+|-|.|-.+ ++-++|-|.|. .+.|.|-.+. +. ...|-|++. +.+.=+...-+-||+|.| .+...
T Consensus 751 ir~g~llK~sk--kgLqqrmfFLf--sdillytsk~~~~~~~fri~g~lP~~-l~~en~en~~s~p~~~ti----~~~qk 821 (1036)
T KOG3531|consen 751 IRSGCLLKLSK--KGLQQRMFFLF--SDILLYTSKGPDVQKCFRINGDLPLT-LTMENSENEWSVPHCFTI----SGAQK 821 (1036)
T ss_pred hhcCCchhhcc--ccchhhhhhhh--hhhheeccCCCChhheeEeccCCceE-eeeecccccccCCceEEE----eccce
Confidence 56788888764 45788888887 6677666552 21 234666666 322112223455677654 46678
Q ss_pred EEEEEeCChHHHHHHHHHHHhhhhhhcc--------------ccCCCCChhhhh------------h-hh--------C-
Q psy9639 133 HIYVYHEESQSIMNWYHAIRNAKFHRLQ--------------VAFPSANDSELV------------K-LL--------T- 176 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~a~~~~l~--------------~~~p~~~~~~l~------------~-~~--------~- 176 (321)
.+++.|.+-.+...|...++.+..-..+ ...|..++++.+ . .+ +
T Consensus 822 ~i~vsast~~~sk~~~~~r~~~i~~~~k~~~~~pg~~~~~l~t~~p~sp~~~sle~~~~~~d~s~~rt~~~rt~p~R~nt 901 (1036)
T KOG3531|consen 822 QIYVSASTRRESKKWEFDRRKAIDLAPKKSSPAPGLFSAQLHTIPPTSPDEDSLEYQESEDDLSVIRTSLERTDPHRQNT 901 (1036)
T ss_pred EEEEeccchhhhhhhhhccchhhhhccccCCCCCCccccccccCCCCCCchhhhcccchhhhHHHHHHhhcccCcccCCc
Confidence 8999999999999999766655432111 111212221110 0 00 0
Q ss_pred --------------------CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEec
Q psy9639 177 --------------------RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRL 236 (321)
Q Consensus 177 --------------------~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~ 236 (321)
-.-...|||..+-... .+|+|-|.|...-+|++||+.+|..+..+++| .||+|..
T Consensus 902 ~vhvcw~r~~sv~~~d~s~a~e~qLsg~Llrkfkns-sgwqkLwvvft~fcl~fyKS~qD~~~laslPl----Lgysvs~ 976 (1036)
T KOG3531|consen 902 PVHVCWHRNTSVSTADHSIAVENQLSGYLLRKFKNS-SGWQKLWVVFTNFCLFFYKSHQDSEPLASLPL----LGYSVSI 976 (1036)
T ss_pred ceEEeecCCCccccCCcchHHHhhhhHHHHHHhhcc-ccceeeeeeecceeeEeecccccccccccccc----cccccCC
Confidence 0014578887665444 59999999999999999999999999999998 6788877
Q ss_pred CCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639 237 GVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 237 ~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
..+.....+.+.|.+...+.+|+|+|++.-.-++|++.|+.+-.
T Consensus 977 P~~~d~i~K~~vfkl~fk~hvyffraes~yt~~rw~evi~~a~~ 1020 (1036)
T KOG3531|consen 977 PAEPDPIQKDYVFKLKFKSHVYFFRAESYYTFERWMEVITDAPS 1020 (1036)
T ss_pred CCCCCCcchhheeeeehhhhHHHHhhhhhhhhhhHHHHhhcCCc
Confidence 54444445779999999999999999999999999999988753
No 87
>PF01412 ArfGap: Putative GTPase activating protein for Arf; InterPro: IPR001164 This entry describes a family of small GTPase activating proteins, for example ARF1-directed GTPase-activating protein, the cycle control GTPase activating protein (GAP) GCS1 which is important for the regulation of the ADP ribosylation factor ARF, a member of the Ras superfamily of GTP-binding proteins []. The GTP-bound form of ARF is essential for the maintenance of normal Golgi morphology, it participates in recruitment of coat proteins which are required for budding and fission of membranes. Before the fusion with an acceptor compartment the membrane must be uncoated. This step required the hydrolysis of GTP associated to ARF. These proteins contain a characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) which displays some similarity to the C4-type GATA zinc finger. The ARFGAP domain display no obvious similarity to other GAP proteins. The 3D structure of the ARFGAP domain of the PYK2-associated protein beta has been solved []. It consists of a three-stranded beta-sheet surrounded by 5 alpha helices. The domain is organised around a central zinc atom which is coordinated by 4 cysteines. The ARFGAP domain is clearly unrelated to the other GAP proteins structures which are exclusively helical. Classical GAP proteins accelerate GTPase activity by supplying an arginine finger to the active site. The crystal structure of ARFGAP bound to ARF revealed that the ARFGAP domain does not supply an arginine to the active site which suggests a more indirect role of the ARFGAP domain in the GTPase hydrolysis []. The Rev protein of human immunodeficiency virus type 1 (HIV-1) facilitates nuclear export of unspliced and partly-spliced viral RNAs []. Rev contains an RNA-binding domain and an effector domain; the latter is believed to interact with a cellular cofactor required for the Rev response and hence HIV-1 replication. Human Rev interacting protein (hRIP) specifically interacts with the Rev effector. The amino acid sequence of hRIP is characterised by an N-terminal, C-4 class zinc finger motif.; GO: 0008060 ARF GTPase activator activity, 0008270 zinc ion binding, 0032312 regulation of ARF GTPase activity; PDB: 2P57_A 2CRR_A 2OWA_B 3O47_B 3DWD_A 1DCQ_A 2CRW_A 3MDB_D 3FEH_A 3LJU_X ....
Probab=98.74 E-value=3.8e-09 Score=83.94 Aligned_cols=47 Identities=28% Similarity=0.395 Sum_probs=41.9
Q ss_pred CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhccccc
Q psy9639 1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRH 48 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~ 48 (321)
|.+.||..||++||++ +....+|.+++....+++|||+||+.+.|+.
T Consensus 69 ~~~~GN~~~n~~~e~~-~~~~~~~~~~~~~~~~~~fI~~KY~~k~f~~ 115 (116)
T PF01412_consen 69 MREGGNKRANSIWEAN-SPPPKKPPPSSDQEKREQFIRAKYVEKAFIS 115 (116)
T ss_dssp HHHSHHHHHHHHHTTT-STTTTTHCTTSHHHHHHHHHHHHHTTHTTS-
T ss_pred HHHHChHHHHHHHHcC-CCCCCCCCCCCcHHHHHHHHHHHHHhhhhcc
Confidence 5678999999999999 5567888899999999999999999999975
No 88
>KOG2059|consensus
Probab=98.71 E-value=2e-08 Score=98.61 Aligned_cols=96 Identities=20% Similarity=0.262 Sum_probs=75.3
Q ss_pred cceEEEEEEeCC----CCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639 179 FGREGWLWKTGP----KNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP 254 (321)
Q Consensus 179 ~~k~G~L~K~g~----~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~ 254 (321)
+.++|.|.|+.. .+++.+|||||.|++..|.|.|++.. .|.+.|+|.++ ..|+..+..+. +.+|+|+|++.
T Consensus 565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT~~~Ls~~Ksp~~-q~~~~Ipl~nI---~avEklee~sF-~~knv~qVV~~ 639 (800)
T KOG2059|consen 565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLTTEELSYAKSPGK-QPIYTIPLSNI---RAVEKLEEKSF-KMKNVFQVVHT 639 (800)
T ss_pred eecccceEeccccccchhhhhhhheEEEeccceeEEecCCcc-CcccceeHHHH---HHHHHhhhhcc-CCCceEEEEec
Confidence 445555555322 22367999999999999999999977 69999999876 33554443343 45789999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 255 QRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 255 ~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|+.||+|.+-.|.++|+++|....
T Consensus 640 drtly~Q~~n~vEandWldaL~kvs 664 (800)
T KOG2059|consen 640 DRTLYVQAKNCVEANDWLDALRKVS 664 (800)
T ss_pred CcceeEecCCchHHHHHHHHHHHHh
Confidence 9999999999999999999999854
No 89
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.68 E-value=3.6e-07 Score=70.85 Aligned_cols=93 Identities=19% Similarity=0.195 Sum_probs=69.4
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRH 133 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~ 133 (321)
.++|-|+|-. .+.-+.|+|.|. ++.|.|=.. .. -...+.|+|.++.+.-.++..+-+|+|+|. +..+.
T Consensus 5 i~eG~L~K~~--rk~~~~R~ffLF--nD~LvY~~~~~~~~~~~~~~~i~L~~~~v~~~~d~~~~~n~f~I~----~~~kS 76 (104)
T cd01218 5 VGEGVLTKMC--RKKPKQRQFFLF--NDILVYGNIVISKKKYNKQHILPLEGVQVESIEDDGIERNGWIIK----TPTKS 76 (104)
T ss_pred EecCcEEEee--cCCCceEEEEEe--cCEEEEEEeecCCceeeEeeEEEccceEEEecCCcccccceEEEe----cCCeE
Confidence 4689999988 355678999999 889998543 22 244688999998543222223456888774 56799
Q ss_pred EEEEeCChHHHHHHHHHHHhhhhhh
Q psy9639 134 IYVYHEESQSIMNWYHAIRNAKFHR 158 (321)
Q Consensus 134 ~~l~a~s~~e~~~W~~aLr~a~~~~ 158 (321)
+.++|+|+++..+|+++|..+.-..
T Consensus 77 f~v~A~s~~eK~eWl~~i~~ai~~~ 101 (104)
T cd01218 77 FAVYAATETEKREWMLHINKCVTDL 101 (104)
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998876543
No 90
>KOG4424|consensus
Probab=98.62 E-value=1.7e-07 Score=90.45 Aligned_cols=222 Identities=20% Similarity=0.208 Sum_probs=141.2
Q ss_pred cccccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-C-----CCCceeEEeccceEEEeccCCCCCCceeEEEEe
Q psy9639 53 TYITGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-E-----KKEPKATLRISELNVVIAPSKIEHPHSLQLTFM 126 (321)
Q Consensus 53 ~~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~-----~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~ 126 (321)
|-..-.|||-|.|....+++-..||++|. ++.|.|-+. . .-++...+++.+..+. ......-++.|.+
T Consensus 268 PsreLiKEG~l~Kis~k~~~~qeRylfLF--Nd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~-~~~~~~~~~tF~~--- 341 (623)
T KOG4424|consen 268 PSRELIKEGQLQKISAKNGTTQERYLFLF--NDILLYCKPRKRLPGSKYEVRARCSISHMQVQ-EDDNEELPHTFIL--- 341 (623)
T ss_pred cHHHHhhccceeeeeccCCCcceeEEEEe--hhHHHhhhhhhhcccceeccceeeccCcchhc-ccccccCCceEEE---
Confidence 43345899999999999999999999999 777777665 2 2233344444444221 1112223555554
Q ss_pred ecCceEEEEEEeCChHHHHHHHHHHHhhhhhhcc---------cc------CCC-------------CC--hh-------
Q psy9639 127 KDGSTRHIYVYHEESQSIMNWYHAIRNAKFHRLQ---------VA------FPS-------------AN--DS------- 169 (321)
Q Consensus 127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~~l~---------~~------~p~-------------~~--~~------- 169 (321)
.|..|.+-|.|.|.++..+|+++|+.+.....+ .+ .++ +. ++
T Consensus 342 -~G~~r~vel~a~t~~ek~eWv~~I~~~Id~~kq~~eTfr~~s~t~~~~~d~~s~~~~~~l~~r~~~~~r~~~k~~~c~~ 420 (623)
T KOG4424|consen 342 -TGKKRGVELQARTEQEKKEWVQAIQDAIDKHKQCRETFRKDSRTPISDNDMKSFSSDYVLGKRKRKAPRRDNKVTSCDS 420 (623)
T ss_pred -ecccceEEeecCchhhHHHHHHHHHHHHHHHHHHHHHHHhccCCchhhccccccccccccccccccCcccccccccchh
Confidence 467899999999999999999999887431100 00 000 00 00
Q ss_pred ---------------------------hhhhhh----------------------------------------CCCcceE
Q psy9639 170 ---------------------------ELVKLL----------------------------------------TRDFGRE 182 (321)
Q Consensus 170 ---------------------------~l~~~~----------------------------------------~~~~~k~ 182 (321)
+....+ +..-.-+
T Consensus 421 c~e~~~s~t~~R~~~k~~~~vlc~~cs~~~~~l~~~~s~ssrv~~~~~~~~~~a~~s~~~rr~~~l~~~~a~~s~~~~~~ 500 (623)
T KOG4424|consen 421 CEETFNSITFRRHRCKAKGAVLCDKCSDFMAKLSYDNSRSSRVCMDRYLTPSGAPGSPPKRRQSILEIELATVSKENVIC 500 (623)
T ss_pred hcCchhhHHHhhhhhhhccceeeccccchhhhhcccccchhhhhhhhccCCCCCCCCchhcccccccccccccCCCceeh
Confidence 000000 0011122
Q ss_pred EEEEEeCCCCCCCcceEEEEEe---CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEE
Q psy9639 183 GWLWKTGPKNADAYRKRWFTLD---YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQ 259 (321)
Q Consensus 183 G~L~K~g~~~~~~WkkRwfvL~---~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~ 259 (321)
+.|.+....+ ..|+.-|++.- ...++-|..+.|......|+| .||.|...+.....+..+.|.++.....++
T Consensus 501 s~l~~~~~~~-~~g~~a~~~vP~~d~~~~~~Yg~~qDv~a~~~iPl----~~~~v~~pe~~~~~D~~~~~k~~~s~~~~~ 575 (623)
T KOG4424|consen 501 SHLKYMEAAG-KTGILAWSVVPKSDPLVDYSYGSPQDVRAQATIPL----PGVEVTIPEFVRREDLFHVFKLVQSHLSWH 575 (623)
T ss_pred hhHHHHhhcC-ccceeeeeeccCCCCccccccCCcccccccccccc----CccccCCCcccccchhcchhhhhhhcceee
Confidence 2222222223 68999999874 567778999999888999999 445554322222234457788887788999
Q ss_pred EEcCCHHHHHHHHHHHhhccccccccC
Q psy9639 260 FSALSAPDRDQWIQAVQTGFTFTLKTP 286 (321)
Q Consensus 260 f~A~s~~e~~~Wv~aL~~ai~~~l~~~ 286 (321)
|.|++++-.++|++.|..|++-++..+
T Consensus 576 ~~a~~~q~qq~wl~~l~~A~~~d~~~~ 602 (623)
T KOG4424|consen 576 LAADDEQLQQRWLEVLLLAVSGDLKEK 602 (623)
T ss_pred eccCCHHHHHHHHHHHHhhhcccccCC
Confidence 999999999999999999997555443
No 91
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=98.60 E-value=6.9e-07 Score=71.32 Aligned_cols=91 Identities=19% Similarity=0.384 Sum_probs=61.9
Q ss_pred eeeEEEee------cC----CCCCceeeEEEEeccCCeEEeecC-CC--------------CCceeEEeccceEEEeccC
Q psy9639 59 MDGFLMKR------GK----ESGKYHPRRFVLNEINDTIKYYVK-EK--------------KEPKATLRISELNVVIAPS 113 (321)
Q Consensus 59 ~~G~L~K~------g~----~~~~wk~R~fvL~~~~~~L~Yy~~-~~--------------~~pkg~I~l~~~~~~~~~~ 113 (321)
++|||..+ |+ ....|+.-|+||. ++.|..|++ .. ..|.+.|+|.++.+..+++
T Consensus 2 keG~l~RK~~~~~~gkk~~~~~R~Wk~~y~vL~--g~~L~~~k~~~~~~~~~~~~~~~~~~~~p~~~i~L~~a~a~~a~d 79 (119)
T PF15410_consen 2 KEGILMRKHELESGGKKASRSKRSWKQVYAVLQ--GGQLYFYKDEKSPASSTPPDIQSVENAKPDSSISLHHALAEIASD 79 (119)
T ss_dssp -EEEEEEEEEEECTTCC---S---EEEEEEEEE--TTEEEEESSHHHHCCT-BS---SS--E-----EE-TT-EEEEETT
T ss_pred ceEEEEEEEEEcCCCCCcCCCCCCccEEeEEEE--CCEEEEEccCcccccCCcccccccccCcceeEEEecceEEEeCcc
Confidence 68998863 22 3467999999999 999999998 21 1344669999988777776
Q ss_pred CCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 114 KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 114 ~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
-..++|-|.+. ..+ .+.|.|.|.|.++|.+|+.+|..+
T Consensus 80 Y~Kr~~VFrL~-~~d--g~e~Lfqa~~~~~m~~Wi~~IN~~ 117 (119)
T PF15410_consen 80 YTKRKNVFRLR-TAD--GSEYLFQASDEEEMNEWIDAINYA 117 (119)
T ss_dssp BTTCSSEEEEE--TT--S-EEEEE-SSHHHHHHHHHHHHHH
T ss_pred cccCCeEEEEE-eCC--CCEEEEECCCHHHHHHHHHHHhhh
Confidence 55688998875 223 478999999999999999999754
No 92
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.58 E-value=4.2e-07 Score=67.56 Aligned_cols=85 Identities=24% Similarity=0.318 Sum_probs=58.4
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeC-CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeE
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDY-RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRW 257 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~-~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~ 257 (321)
+++.|.+.|+.+. .+++|=++|++ ..|.|.+.. ....+|.|+++.. ...|+.. ....|.|+||+|+
T Consensus 1 Il~~g~v~Kr~gl---f~kkR~LiLTd~PrL~yvdp~-~~~~KgeIp~s~~--~l~v~~~-------~~~~F~I~Tp~rt 67 (89)
T cd01262 1 ILKIGAVKKRKGL---FAKKRQLILTNGPRLIYVDPV-KKVVKGEIPWSDV--ELRVEVK-------NSSHFFVHTPNKV 67 (89)
T ss_pred Cceeeeeeehhcc---ccceeeEEEecCceEEEEcCC-cCeEEeEeccccc--ceEEEEe-------cCccEEEECCCce
Confidence 3578999998875 47999999985 566565544 5578999999762 1334331 2246999999999
Q ss_pred EEEEcCCHHHHHHHHHHHhh
Q psy9639 258 YQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 258 ~~f~A~s~~e~~~Wv~aL~~ 277 (321)
|+|. +......+|+++|..
T Consensus 68 y~le-D~~~~a~~W~~~I~~ 86 (89)
T cd01262 68 YSFE-DPKGRASQWKKAIED 86 (89)
T ss_pred EEEE-CCCCCHHHHHHHHHH
Confidence 9964 333555556666544
No 93
>cd01239 PH_PKD Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain. PKD consists of 2 C1 domains, followed by a PH domain and a kinase domain. While the PKD PH domain has not been shown to bind phosphorylated inositol lipids and is not required for membrane translocation, it is required for nuclear export. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.55 E-value=7.1e-07 Score=69.21 Aligned_cols=76 Identities=14% Similarity=0.277 Sum_probs=60.6
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC-----CCCCCceeEEEEeecCce
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS-----KIEHPHSLQLTFMKDGST 131 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~-----~~~~~~~~~i~~~~~~~~ 131 (321)
.+|||+.--....+.|||+|++|. ..+|.+|.+ .+..+-..|+|+++..+-... ....+|+|.|. +.+
T Consensus 1 lkEGWmVHyT~~d~~rKRhYWrLD--sK~Itlf~~e~~skyyKeIPLsEIl~V~~~~~~~~~~~~~~hcFEi~----T~~ 74 (117)
T cd01239 1 LKEGWMVHYTSSDNRRKKHYWRLD--SKAITLYQEESGSRYYKEIPLAEILSVSSNNGDSVLAKHPPHCFEIR----TTT 74 (117)
T ss_pred CccceEEEEecCccceeeeEEEec--CCeEEEEEcCCCCeeeEEeehHHheEEeccCCCcCCCCCCCcEEEEE----ecC
Confidence 379999998888899999999998 999999999 889999999999986543211 12467777664 466
Q ss_pred EEEEEEeC
Q psy9639 132 RHIYVYHE 139 (321)
Q Consensus 132 R~~~l~a~ 139 (321)
++||+..+
T Consensus 75 ~vY~VG~~ 82 (117)
T cd01239 75 NVYFVGGE 82 (117)
T ss_pred EEEEeccc
Confidence 88998664
No 94
>KOG0690|consensus
Probab=98.50 E-value=1.6e-07 Score=85.64 Aligned_cols=96 Identities=21% Similarity=0.392 Sum_probs=63.6
Q ss_pred ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCC----CceeEEeccceEEEeccCCCCCCceeEEEEeecC
Q psy9639 56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDG 129 (321)
Q Consensus 56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 129 (321)
...++|||+|+|...++|+.|||+|.. +|.|.=|+. .+. .|..-..+.++..+. .....||-|-|....-+
T Consensus 14 ~vvkEgWlhKrGE~IknWRpRYF~l~~-DG~~~Gyr~kP~~~~~~p~pLNnF~v~~cq~m~--~erPrPntFiiRcLQWT 90 (516)
T KOG0690|consen 14 DVVKEGWLHKRGEHIKNWRPRYFLLFN-DGTLLGYRSKPKEVQPTPEPLNNFMVRDCQTMK--TERPRPNTFIIRCLQWT 90 (516)
T ss_pred hhHHhhhHhhcchhhhcccceEEEEee-CCceEeeccCCccCCCCcccccchhhhhhhhhh--ccCCCCceEEEEeeeee
Confidence 468999999999999999999999996 666665554 332 333444444442211 12345666655333211
Q ss_pred --ceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639 130 --STRHIYVYHEESQSIMNWYHAIRNAKF 156 (321)
Q Consensus 130 --~~R~~~l~a~s~~e~~~W~~aLr~a~~ 156 (321)
-.|+ |+++|++++.+|+.||++..-
T Consensus 91 TVIERT--F~ves~~eRq~W~~AIq~vsn 117 (516)
T KOG0690|consen 91 TVIERT--FYVESAEERQEWIEAIQAVSN 117 (516)
T ss_pred eeeeee--eecCCHHHHHHHHHHHHHHhh
Confidence 1255 578999999999999987643
No 95
>KOG0521|consensus
Probab=98.47 E-value=5.5e-08 Score=99.73 Aligned_cols=97 Identities=25% Similarity=0.452 Sum_probs=78.7
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR 256 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r 256 (321)
......|+|+|+.....+.|+||||...++.+.|+..-.+.......+| ..|+|..+. ....+.+||+|+++.|
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q~~~l~~~~r~~~~~~~~~~dL----~~csvk~~~--~~~drr~CF~iiS~tk 345 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQDGQLGYQHRGADAENVLIEDL----RTCSVKPDA--EQRDRRFCFEIISPTK 345 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhhccccccccccccccccccccc----hhccccCCc--ccccceeeEEEecCCc
Confidence 3456789999887776689999999999999999888777654555566 346676543 2225789999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 257 WYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 257 ~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|.|+|+|+.+.+.||.+|++.|
T Consensus 346 s~~lQAes~~d~~~Wi~~i~nsi 368 (785)
T KOG0521|consen 346 SYLLQAESEKDCQDWISALQNSI 368 (785)
T ss_pred ceEEecCchhHHHHHHHHHHHHH
Confidence 99999999999999999999987
No 96
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=98.44 E-value=2e-06 Score=66.58 Aligned_cols=89 Identities=19% Similarity=0.185 Sum_probs=60.7
Q ss_pred cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEE
Q psy9639 57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYV 136 (321)
Q Consensus 57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l 136 (321)
..++|++.|+.+.. .++|+|+|. ++..|.|+.......||.|+++....+-. .....|. +.+++|+|+|
T Consensus 13 Il~~g~v~K~kgl~--~kkR~liLT-d~PrL~Yvdp~~~~~KGeI~~~~~l~v~~----k~~~~F~----I~tp~RtY~l 81 (104)
T PF14593_consen 13 ILKQGYVKKRKGLF--AKKRQLILT-DGPRLFYVDPKKMVLKGEIPWSKELSVEV----KSFKTFF----IHTPKRTYYL 81 (104)
T ss_dssp EEEEEEEEEEETTE--EEEEEEEEE-TTTEEEEEETTTTEEEEEE--STT-EEEE----CSSSEEE----EEETTEEEEE
T ss_pred EEEEEEEEEeeceE--EEEEEEEEc-cCCEEEEEECCCCeECcEEecCCceEEEE----ccCCEEE----EECCCcEEEE
Confidence 46899999998776 999999999 24477777777778899999996532211 1223443 4456799998
Q ss_pred EeCChHHHHHHHHHHHhhhhh
Q psy9639 137 YHEESQSIMNWYHAIRNAKFH 157 (321)
Q Consensus 137 ~a~s~~e~~~W~~aLr~a~~~ 157 (321)
...+ .....|+++|......
T Consensus 82 ~d~~-~~A~~W~~~I~~~~~~ 101 (104)
T PF14593_consen 82 EDPE-GNAQQWVEAIEEVKKQ 101 (104)
T ss_dssp E-TT-S-HHHHHHHHHHHHHH
T ss_pred ECCC-CCHHHHHHHHHHHHHH
Confidence 8744 4567899999876543
No 97
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.40 E-value=5.7e-06 Score=63.84 Aligned_cols=91 Identities=19% Similarity=0.395 Sum_probs=65.0
Q ss_pred eeeEEE--eecCC--CCCceeeEEEEeccCCeEEeecC-CC---CCceeEEeccceEE---E-----eccCCCCCCceeE
Q psy9639 59 MDGFLM--KRGKE--SGKYHPRRFVLNEINDTIKYYVK-EK---KEPKATLRISELNV---V-----IAPSKIEHPHSLQ 122 (321)
Q Consensus 59 ~~G~L~--K~g~~--~~~wk~R~fvL~~~~~~L~Yy~~-~~---~~pkg~I~l~~~~~---~-----~~~~~~~~~~~~~ 122 (321)
+||||- +.|+. ..+|+++|.||. +..|..|.. .+ ..|-.+++|.+.-- + ++.....-|.=|+
T Consensus 2 lEGwlsvP~~~~~~~k~gW~r~yvVv~--~~Kl~lYd~e~~~~~~~p~~vldl~~~fhv~~V~asDVi~a~~kDiP~IF~ 79 (112)
T cd01242 2 MEGWLSLPNRTNKSRKPGWKKQYVVVS--SRKILFYNDEQDKENSTPSMILDIDKLFHVRPVTQGDVYRADAKEIPKIFQ 79 (112)
T ss_pred cceeEEccCCCCccccCCceEEEEEEe--CCEEEEEecCccccCCCcEEEEEccceeeeecccHHHeeecCcccCCeEEE
Confidence 589996 34333 358999999999 899999987 33 45777888765211 1 1122334555677
Q ss_pred EEEeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 123 LTFMKDGSTRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 123 i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
|.+. +..|++++-|+++.|...|+.+|+.
T Consensus 80 I~~~--~~~~~lllLA~s~~ek~kWV~~L~~ 108 (112)
T cd01242 80 ILYA--NEARDLLLLAPQTDEQNKWVSRLVK 108 (112)
T ss_pred EEeC--CccceEEEEeCCchHHHHHHHHHHH
Confidence 7764 3459999999999999999999974
No 98
>PLN03119 putative ADP-ribosylation factor GTPase-activating protein AGD14; Provisional
Probab=98.36 E-value=2.6e-07 Score=89.22 Aligned_cols=50 Identities=12% Similarity=0.213 Sum_probs=41.3
Q ss_pred CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639 1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE 50 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~ 50 (321)
|..+||.+||++||+++|....+|..++....++.|||+||++|+|+...
T Consensus 76 Mk~gGN~~AN~iyeanw~~~~~~~P~~sD~e~lr~FIR~KYVeKRF~~~~ 125 (648)
T PLN03119 76 LQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKKYAGAN 125 (648)
T ss_pred HHHhchHHHHHHHHhhcccccCCCCCCccHHHHHHHHHHHHhhhhccCcC
Confidence 56789999999999999887656545555666788999999999999764
No 99
>KOG3640|consensus
Probab=98.35 E-value=6.5e-07 Score=90.53 Aligned_cols=74 Identities=19% Similarity=0.313 Sum_probs=51.5
Q ss_pred CCcceEEEEEEe-CCCCCCCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639 177 RDFGREGWLWKT-GPKNADAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK 252 (321)
Q Consensus 177 ~~~~k~G~L~K~-g~~~~~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~ 252 (321)
.++.-.|||+.- ...+.+.|+||||+|.++.+.|++.|.| +.|.|.|+|+.|+. -.|.+. +...-.+.+.|.|.
T Consensus 988 idVEYrGFLtmfed~sgfGaWhRyWc~L~gg~I~fWk~PdDEkrK~Pig~IDLt~CTs-q~ie~a-~rdicar~ntFhie 1065 (1116)
T KOG3640|consen 988 IDVEYRGFLTMFEDGSGFGAWHRYWCALHGGEIKFWKYPDDEKRKVPIGQIDLTKCTS-QSIEEA-RRDICARPNTFHIE 1065 (1116)
T ss_pred cceeeeeeeeeeeccCCCchhhhhhHHhcCCeeeeecCcchhcccCcceeeehhhhhc-cccccc-hhhhccCCceeEEE
Confidence 345667999752 2222368999999999999999998755 45889999988744 233332 22334567888887
No 100
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.33 E-value=7.2e-06 Score=64.36 Aligned_cols=92 Identities=14% Similarity=0.221 Sum_probs=70.4
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC-----------CCceeEEeccceEEEeccCCCCCCceeEEEE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK-----------KEPKATLRISELNVVIAPSKIEHPHSLQLTF 125 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~-----------~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~ 125 (321)
++||-|.|-+...+..+.|+|.|. ++.|.|=+. .. =..++.++|..+.+.-.|....-+|+|+|.
T Consensus 5 I~EG~L~ki~~~~~~~q~R~~FLF--d~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~~~~knaF~I~- 81 (112)
T cd01261 5 IMEGTLTRVGPSKKAKHERHVFLF--DGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDSSEYKNAFEII- 81 (112)
T ss_pred cccCcEEEEecccCCcceEEEEEe--cCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCCcccCceEEEE-
Confidence 578999999988888999999999 999988776 22 234567888887655444433457888874
Q ss_pred eecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 126 MKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 126 ~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
...++.+.|+|.++++..+|+.+|-.+
T Consensus 82 --~~~~~s~~l~Akt~eeK~~Wm~~l~~~ 108 (112)
T cd01261 82 --LKDGNSVIFSAKNAEEKNNWMAALISV 108 (112)
T ss_pred --cCCCCEEEEEECCHHHHHHHHHHHHHH
Confidence 112478999999999999999998754
No 101
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.31 E-value=5.4e-06 Score=64.37 Aligned_cols=95 Identities=17% Similarity=0.248 Sum_probs=64.2
Q ss_pred EEEEEEeCCC---CCCCcceEEEEEeCCeeEeeeCCCC-----CCcceeEEcccccCceE-EecCCC-CCCCCCCceEEE
Q psy9639 182 EGWLWKTGPK---NADAYRKRWFTLDYRKLMYHEEPLS-----AYPKGEIFLGHCSDGYT-VRLGVP-PGAKDQGFTFTL 251 (321)
Q Consensus 182 ~G~L~K~g~~---~~~~WkkRwfvL~~~~L~Yyk~~~~-----~~~~g~i~L~~~~~~~~-V~~~~~-~~~~~~~~~F~i 251 (321)
-|||..+-.. ..+.||.||++|++..|+.|+++.- ..|.-..+|-.+ .+. |+.... +...+.++||.|
T Consensus 2 mGW~~E~~~~~~~~~~~wrP~F~aL~~~dl~ly~s~P~s~e~w~~p~~~y~L~~~--atrvv~~~~~~~~~~~~~~~F~i 79 (108)
T cd01258 2 IGWVNEQLSGDDESSQRWRPRFLALKGSEFLFFETPPLSVEDWSRPLYVYKLYDV--ATRLVKNSSTRRLNDQRDNCFLI 79 (108)
T ss_pred ceecccccCCCCccccccceEEEEEcCCcEEEEeCCCCCHHHHhChhhhChhHHh--hhheeccCCccCcCCCCceEEEE
Confidence 3888766322 2378999999999999999998754 235555555211 011 221111 111246789999
Q ss_pred EeCC--eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 252 KTPQ--RWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 252 ~t~~--r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
.+.. .+++|+.|+..|+..|..||+++
T Consensus 80 rtg~~vesh~fsVEt~~dL~~W~raiv~g 108 (108)
T cd01258 80 RTGTQVENHYLRVETHRDLASWERALVRG 108 (108)
T ss_pred EcCCceeeEEEEecCHHHHHHHHHHHhcC
Confidence 9875 79999999999999999999764
No 102
>PLN02866 phospholipase D
Probab=98.30 E-value=1.8e-05 Score=82.32 Aligned_cols=132 Identities=17% Similarity=0.221 Sum_probs=89.6
Q ss_pred cceEEEEEEeC-----C-C--C-----------CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEccccc-----CceEE
Q psy9639 179 FGREGWLWKTG-----P-K--N-----------ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCS-----DGYTV 234 (321)
Q Consensus 179 ~~k~G~L~K~g-----~-~--~-----------~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~-----~~~~V 234 (321)
-.++||+.|+. + . . ...|+||||+|+++.|.|.+++.+..+..+|.+...- ....+
T Consensus 182 K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k~~~l~~~~~p~~~~~~~v~lfD~~~~~~~~~~~~~ 261 (1068)
T PLN02866 182 KLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLKPGFLALLEDPFDAKPLDIIVFDVLPASNGNGEGQI 261 (1068)
T ss_pred CcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEeccEEEEEecCCCCceeEEEEEecccccccCCCcce
Confidence 46899999981 1 0 0 2469999999999999999999888888877664211 00111
Q ss_pred ecCCC-CCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhcc--------------ccccccC----ceEEEEecC
Q psy9639 235 RLGVP-PGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGF--------------TFTLKTP----QRWYQFSAL 295 (321)
Q Consensus 235 ~~~~~-~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai--------------~~~l~~~----~~~~~l~a~ 295 (321)
..... .......+.|.|.+.+|+..|.+.|...+..|+.+|+.+. +|....+ .....+..+
T Consensus 262 ~~~~~~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~~~~~~~~~~hRF~SFAP~r~~~~~gN~vk~LvD 341 (1068)
T PLN02866 262 SLAKEIKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTEDGSQAQWFID 341 (1068)
T ss_pred eecccccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHhccCccccccCcCCCcCCCccccCCCCEEEEEeC
Confidence 11110 1111346899999999999999999999999999999986 1222221 123455556
Q ss_pred CHHHHHHHHHHHHHh
Q psy9639 296 SAPDRDQWIQAVQTV 310 (321)
Q Consensus 296 s~~e~~~Wi~al~~~ 310 (321)
-++-+..=++||..|
T Consensus 342 G~dyF~AL~eAIe~A 356 (1068)
T PLN02866 342 GHAAFEAIASAIENA 356 (1068)
T ss_pred HHHHHHHHHHHHHhc
Confidence 666666666666665
No 103
>KOG2059|consensus
Probab=98.29 E-value=1.2e-06 Score=86.48 Aligned_cols=93 Identities=20% Similarity=0.433 Sum_probs=73.5
Q ss_pred cceeeEEEeecCCC-----CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEE--eccCCCCCCceeEEEEeecC
Q psy9639 57 GHMDGFLMKRGKES-----GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVV--IAPSKIEHPHSLQLTFMKDG 129 (321)
Q Consensus 57 ~~~~G~L~K~g~~~-----~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~--~~~~~~~~~~~~~i~~~~~~ 129 (321)
..++|.+.|+.+.. .+||+|||.|. ...|.|-++....|.+.|+|+++..+ +.....+..|.||+.+..
T Consensus 565 v~k~glm~kr~~gr~~~~~~~FKKryf~LT--~~~Ls~~Ksp~~q~~~~Ipl~nI~avEklee~sF~~knv~qVV~~d-- 640 (800)
T KOG2059|consen 565 VLKEGLMIKRAQGRGRFGKKNFKKRYFRLT--TEELSYAKSPGKQPIYTIPLSNIRAVEKLEEKSFKMKNVFQVVHTD-- 640 (800)
T ss_pred eecccceEeccccccchhhhhhhheEEEec--cceeEEecCCccCcccceeHHHHHHHHHhhhhccCCCceEEEEecC--
Confidence 35566666654332 57999999999 89999999988889999999998543 122346788899987543
Q ss_pred ceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 130 STRHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 130 ~~R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
|++|+.|.+..|..+|+++|+...
T Consensus 641 --rtly~Q~~n~vEandWldaL~kvs 664 (800)
T KOG2059|consen 641 --RTLYVQAKNCVEANDWLDALRKVS 664 (800)
T ss_pred --cceeEecCCchHHHHHHHHHHHHh
Confidence 899999999999999999997654
No 104
>PLN03131 hypothetical protein; Provisional
Probab=98.28 E-value=4.3e-07 Score=88.39 Aligned_cols=50 Identities=12% Similarity=0.181 Sum_probs=40.7
Q ss_pred CccccchHHHHhhhccCCCCCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639 1 MKQIGNNVSKLKYEMRVPASYKVPTSSCPQVLLKEWIRSKYEREEFRHPE 50 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~ 50 (321)
|...||.+||++||++++....++..++....++.|||+|||+|+|+.+.
T Consensus 76 Mk~gGN~~AN~iyeanwd~~r~~lP~~sd~ekrr~FIR~KYVeKRFa~~~ 125 (705)
T PLN03131 76 LQNGGNQRAREIYLKDWDQQRQRLPDNSKVDKIREFIKDIYVDKKYAGGK 125 (705)
T ss_pred HHHhccHHHHHHHHhhcccccCCCCCCccHHHHHHHHHHHHhhhhhhcCC
Confidence 56789999999999999876555444555566788999999999999754
No 105
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=98.25 E-value=8.9e-07 Score=67.67 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=70.4
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-CCe
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT-PQR 256 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t-~~r 256 (321)
+++..||+.|.|+-+...|++|||-|-.++|.+|....+ .....|.+..+.+++ ... ... ....|+.|.. .++
T Consensus 2 DcIvhGyi~KLGGPFls~WQ~Ry~~LfPNRLE~~~~~~~-~~~eLi~M~~i~~V~---~e~-~~i-K~~~CI~ik~k~~~ 75 (116)
T cd01240 2 DCIVHGYIKKLGGPFLSQWQTRYFKLYPNRLELYGESEA-NKPELITMDQIEDVS---VEF-QQI-KEENCILLKIRDEK 75 (116)
T ss_pred ceEEeeehhhhCCHHHHHHHHHHheeCcceeeecccccc-cCCcEEEeehhhhcc---hhh-eee-ccCceEEEEEcCCc
Confidence 678899999999887789999999999999999755444 334456665543321 110 111 2346888886 478
Q ss_pred EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 257 WYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 257 ~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
.|++.++++-+..+|...|++|-
T Consensus 76 k~vlt~~d~i~l~qW~~elr~a~ 98 (116)
T cd01240 76 KIVLTNSDEIELKQWKKELRDAH 98 (116)
T ss_pred eEEEecCCcHHHHHHHHHHHHHH
Confidence 89999999999999999988764
No 106
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=98.22 E-value=3.1e-06 Score=83.38 Aligned_cols=98 Identities=22% Similarity=0.282 Sum_probs=62.6
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEee-eCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYH-EEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT 253 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yy-k~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t 253 (321)
.++...|||.|.+... .|++|||.+.++.+... ....+ ......+.+..+..++.|-. ......+++|.|.+
T Consensus 375 sDv~~~G~l~k~~~~~--~wk~ry~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~---~~~~~~~~~~~i~~ 449 (478)
T PTZ00267 375 SDVTHGGYLYKYSSDM--RWKKRYFYIGNGQLRISLSENPENDGVAPKSVNLETVNDVFPVPE---VYSQKHPNQLVLWF 449 (478)
T ss_pred CCcccceEEeccCCCc--chhhheEEecCCceEEEeccccccCCCCCccccHHHhcccccccH---HhcCCCCceEEEEe
Confidence 4678899999998765 59999999997766653 32211 12223344443333332211 11234678999986
Q ss_pred -CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 254 -PQRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 254 -~~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
.++.++|.|+|++++++||.+|++++
T Consensus 450 ~~~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 450 NNGQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred cCCcEEEEecCChHHHHHHHHHHHHHh
Confidence 57788877777777777777777765
No 107
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.15 E-value=3.7e-05 Score=60.31 Aligned_cols=94 Identities=16% Similarity=0.235 Sum_probs=63.8
Q ss_pred ceeeEEE--eecCCCCCceeeEEEEeccCCeEEeecC-CC--C----CceeEEeccceEE----Eec-----cCCCCCCc
Q psy9639 58 HMDGFLM--KRGKESGKYHPRRFVLNEINDTIKYYVK-EK--K----EPKATLRISELNV----VIA-----PSKIEHPH 119 (321)
Q Consensus 58 ~~~G~L~--K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~--~----~pkg~I~l~~~~~----~~~-----~~~~~~~~ 119 (321)
..||||. |.|+..++|.|+|.||. +..|..|.. .+ . .|--+|+|.+-.. +.+ ..+..-|.
T Consensus 3 ~~EGwvkvP~~~~~krGW~r~~vVv~--~~Kl~lYd~e~~k~~~p~~~~~~vLdlrD~~fsV~~VtasDvi~a~~kDiP~ 80 (122)
T cd01243 3 AYEGHVKIPKPGGVKKGWQRALVVVC--DFKLFLYDIAEDRASQPSVVISQVLDMRDPEFSVSSVLESDVIHASKKDIPC 80 (122)
T ss_pred cceeeEeccCCCCcccCceEEEEEEe--CCEEEEEeCCccccCCccCceeEEEEcCCCCEEEEEecHHHccccCcccCCe
Confidence 4699997 55555679999999999 999999987 32 2 3445677743211 112 22233444
Q ss_pred eeEEEEee---cCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 120 SLQLTFMK---DGSTRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 120 ~~~i~~~~---~~~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
=|+|+-.. -.+.+++++-|+|+.|..+|+.+|..
T Consensus 81 If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~ 117 (122)
T cd01243 81 IFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSE 117 (122)
T ss_pred EEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHH
Confidence 55654322 12458899999999999999999864
No 108
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.07 E-value=0.00012 Score=56.92 Aligned_cols=93 Identities=19% Similarity=0.226 Sum_probs=64.0
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC---C-CCCcceeEEcccccCceEEecCCCCCC-----CCCCceE
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP---L-SAYPKGEIFLGHCSDGYTVRLGVPPGA-----KDQGFTF 249 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~---~-~~~~~g~i~L~~~~~~~~V~~~~~~~~-----~~~~~~F 249 (321)
++++|-|.+.+... +.=+.|+|.|-++.|.|-|.. . .-.-+|.|+|.. +.|.... ++. ..-.+.|
T Consensus 2 li~~Gel~~~s~~~-g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~----~~I~d~~-Dg~~~~~~~~~knaf 75 (109)
T cd01224 2 LFLQGEATRQKQNK-GWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDR----CEVVNIR-DGKMFSSGHTIKNSL 75 (109)
T ss_pred ceEeeeEEEEeccc-CCcccEEEEEecceEEEEecccccCCcEEEEEEEEccc----EEEEECC-CCccccCCceeEEEE
Confidence 47899999887542 234579999999999999853 2 223589999954 5565432 221 1126889
Q ss_pred EEEeC--CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 250 TLKTP--QRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 250 ~i~t~--~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
.|+.. +..|.|+|.|+++.+.||+||..
T Consensus 76 kl~~~~~~~~~~f~~Kt~e~K~~Wm~a~~~ 105 (109)
T cd01224 76 KIYSESTDEWYLFSFKSAERKHRWLSAFAL 105 (109)
T ss_pred EEEEcCCCeEEEEEECCHHHHHHHHHHHHH
Confidence 99965 47799777777777777777753
No 109
>KOG3751|consensus
Probab=98.04 E-value=7.1e-06 Score=78.59 Aligned_cols=98 Identities=26% Similarity=0.374 Sum_probs=71.0
Q ss_pred cceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccce---EE--Eec---cCCCCCCceeEEEEee
Q psy9639 57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISEL---NV--VIA---PSKIEHPHSLQLTFMK 127 (321)
Q Consensus 57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~---~~--~~~---~~~~~~~~~~~i~~~~ 127 (321)
..++|||+-++-..+.|||-||||+ ...|.|+.+ +.++|+.--.|.++ ++ .+. .-+...++||.|.-..
T Consensus 317 pei~GfL~~K~dgkKsWKk~yf~LR--~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~~ 394 (622)
T KOG3751|consen 317 PEIQGFLYLKEDGKKSWKKHYFVLR--RSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPNK 394 (622)
T ss_pred ccccceeeecccccccceeEEEEEe--cCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeecc
Confidence 3679999999988899999999999 889999988 88888764444332 21 121 0122245676665444
Q ss_pred cCce-EEE-EEEeCChHHHHHHHHHHHhhhh
Q psy9639 128 DGST-RHI-YVYHEESQSIMNWYHAIRNAKF 156 (321)
Q Consensus 128 ~~~~-R~~-~l~a~s~~e~~~W~~aLr~a~~ 156 (321)
..+. |.+ +++|+++..+..|+.|||-+++
T Consensus 395 ~~~~~r~lk~lCAEDe~t~~~WltAiRl~Ky 425 (622)
T KOG3751|consen 395 LRNKRRFLKMLCAEDEQTRTCWLTAIRLLKY 425 (622)
T ss_pred ccCcccceeeeecccchhHHHHHHHHHHHHH
Confidence 3333 556 8999999999999999998875
No 110
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=98.03 E-value=0.0001 Score=59.07 Aligned_cols=91 Identities=23% Similarity=0.379 Sum_probs=51.9
Q ss_pred EEEEEeCCCC----CCCcceEEEEEeC--CeeEeeeCCC-CCC----cceeEEcccccCceEEecCCCCCCCC----CCc
Q psy9639 183 GWLWKTGPKN----ADAYRKRWFTLDY--RKLMYHEEPL-SAY----PKGEIFLGHCSDGYTVRLGVPPGAKD----QGF 247 (321)
Q Consensus 183 G~L~K~g~~~----~~~WkkRwfvL~~--~~L~Yyk~~~-~~~----~~g~i~L~~~~~~~~V~~~~~~~~~~----~~~ 247 (321)
.||+|-+..+ .+..++|||-|+. ..|++..... ... ..+.+.|.++ ..|.+..+..... ..+
T Consensus 13 ~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v---~~V~~~~~~~~~~~~~~~~~ 89 (123)
T PF12814_consen 13 EWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESV---TEVKDGNPSPPGLKKPDHNK 89 (123)
T ss_pred cEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeee---EEecCCCCCCccccccccce
Confidence 5788855443 2478999999985 5566655332 111 2345777554 2333322222111 357
Q ss_pred eEEEEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639 248 TFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276 (321)
Q Consensus 248 ~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~ 276 (321)
+|.|.+++|+.-|.|++.++.+-|+.+|+
T Consensus 90 si~i~t~~R~L~l~a~s~~~~~~W~~aL~ 118 (123)
T PF12814_consen 90 SIIIVTPDRSLDLTAPSRERHEIWFNALR 118 (123)
T ss_pred EEEEEcCCeEEEEEeCCHHHHHHHHHHHH
Confidence 78888999999955555555555555543
No 111
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.02 E-value=0.00011 Score=56.20 Aligned_cols=89 Identities=16% Similarity=0.139 Sum_probs=59.4
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC-CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP-- 254 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~-~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~-- 254 (321)
..+++|.|...+. =+.|++.|-+..|.|-|...+. ..+..|.++. ..|.+.. .+.+++|.|...
T Consensus 3 eLlleg~l~~~~~-----~~eR~vFLFe~~ll~~K~~~~~y~~K~~i~~~~----l~i~e~~----~~d~~~F~v~~~~~ 69 (97)
T cd01222 3 DLLLEGRFREHGG-----GKPRLLFLFQTMLLIAKPRGDKYQFKAYIPCKN----LMLVEHL----PGEPLCFRVIPFDD 69 (97)
T ss_pred ceeeeceEEeecC-----CCceEEEEecccEEEEEecCCeeEEEEEEEecc----eEEecCC----CCCCcEEEEEecCC
Confidence 4577888874433 3469999999999998865443 2356676643 4444422 134789999754
Q ss_pred -CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 255 -QRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 255 -~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
.+.|.|+|.|.++++.||++|+.++
T Consensus 70 p~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 70 PKGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred CceEEEEEecCHHHHHHHHHHHHHHh
Confidence 3789977777777777777776654
No 112
>KOG3640|consensus
Probab=98.02 E-value=9.2e-06 Score=82.43 Aligned_cols=97 Identities=19% Similarity=0.430 Sum_probs=71.6
Q ss_pred cceeeEEEe--ecCCCCCceeeEEEEeccCCeEEeecC-C---CCCceeEEeccceEEE-eccCC---CCCCceeEEE--
Q psy9639 57 GHMDGFLMK--RGKESGKYHPRRFVLNEINDTIKYYVK-E---KKEPKATLRISELNVV-IAPSK---IEHPHSLQLT-- 124 (321)
Q Consensus 57 ~~~~G~L~K--~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~---~~~pkg~I~l~~~~~~-~~~~~---~~~~~~~~i~-- 124 (321)
....|||.- -+..++.|+||||+|. +|++.|.+. + .+.|.|.|+|+.|+.. +.+.. -+.+|.|.|.
T Consensus 990 VEYrGFLtmfed~sgfGaWhRyWc~L~--gg~I~fWk~PdDEkrK~Pig~IDLt~CTsq~ie~a~rdicar~ntFhie~~ 1067 (1116)
T KOG3640|consen 990 VEYRGFLTMFEDGSGFGAWHRYWCALH--GGEIKFWKYPDDEKRKVPIGQIDLTKCTSQSIEEARRDICARPNTFHIEVW 1067 (1116)
T ss_pred eeeeeeeeeeeccCCCchhhhhhHHhc--CCeeeeecCcchhcccCcceeeehhhhhccccccchhhhccCCceeEEEee
Confidence 355799875 5666788999999999 999999987 3 4788999999988442 22221 3577888875
Q ss_pred --EeecC-----ceE-EEEEEeCChHHHHHHHHHHHhhh
Q psy9639 125 --FMKDG-----STR-HIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 125 --~~~~~-----~~R-~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
.+.+. ..| ...|.||+.+++..|+++|...-
T Consensus 1068 rPl~~Dqep~~ie~r~Rv~LaADTkeel~~Wls~iN~tL 1106 (1116)
T KOG3640|consen 1068 RPLEDDQEPLLIEKRLRVMLAADTKEELQSWLSAINDTL 1106 (1116)
T ss_pred cccccccCcchhhhcceeeeecccHHHHHHHHHHHHHHH
Confidence 22221 123 46799999999999999998663
No 113
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.98 E-value=4.1e-05 Score=76.83 Aligned_cols=100 Identities=14% Similarity=0.274 Sum_probs=66.3
Q ss_pred CcceEEEEEEeCCCC--CCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCC-CceEEEE
Q psy9639 178 DFGREGWLWKTGPKN--ADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQ-GFTFTLK 252 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~--~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~-~~~F~i~ 252 (321)
.+.++|||+.-|... ..-.++|||||.++.|.|||.... ..|..+..+.. .|.|++.--+...++ -|.|.|.
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~~~~~~~yK~~P~~~~~pirs~~id~---~~rVed~Gr~~~~g~~~yvl~~Y 79 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLESRLLAYYKKKPQDNQVPIKTLLIDG---NCRVEDRGLKTHHGHMVYVLSVY 79 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEecchhhhcccCCccccccceeeccCC---CceEeecCceEEcCceEEEEEEe
Confidence 457899999877643 235789999999999999997432 33444444432 245544211111111 2667776
Q ss_pred eC---CeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639 253 TP---QRWYQFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 253 t~---~r~~~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
.. .+...|.|-+.+|..+|++||+.|+.
T Consensus 80 n~~~~~~~~~~~a~~~eea~~W~~a~~~a~~ 110 (719)
T PLN00188 80 NKKEKYHRITMAAFNIQEALIWKEKIESVID 110 (719)
T ss_pred cCCCccccEEEecCCHHHHHHHHHHHHHHHh
Confidence 43 57888888888888888888888885
No 114
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.92 E-value=0.00011 Score=56.25 Aligned_cols=95 Identities=11% Similarity=-0.005 Sum_probs=62.4
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeC--CCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCe
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEE--PLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQR 256 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~--~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r 256 (321)
++.+|=|..-+....+.=++..|.|-++.|.|-.- .........++|.+ ..|... .+.+.-+++|.|.++.+
T Consensus 2 ~i~~G~l~e~~~~~~kp~~rv~~FLfND~Lvva~~~~~~ky~~~~~~~L~~----i~V~ni--~D~~~~kNafki~t~~~ 75 (100)
T cd01226 2 VILYGELEEFDVETKKPVQRVMLFLLNDRLIVGNINAAGKYVMESTYSLNS----VAVVNV--KDRENAKKVLKLLIFPE 75 (100)
T ss_pred EEEcCcEEEechhhCCccceEEEEEeccEEEEEEecccceEEEEEEEehHH----eEEEec--CCCcCcCceEEEEeCCc
Confidence 45677777766555334455657777777777543 22233467788854 334332 22234578999999999
Q ss_pred EEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 257 WYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 257 ~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
++.++|+|+++..+|+..|.+|.
T Consensus 76 s~i~qaes~~~K~eWl~~le~a~ 98 (100)
T cd01226 76 SRIYQCESARIKTEWFEELEQAK 98 (100)
T ss_pred cEEEEeCCHHHHHHHHHHHHHHh
Confidence 99988888888888888777764
No 115
>KOG0932|consensus
Probab=97.86 E-value=4.1e-06 Score=80.70 Aligned_cols=102 Identities=18% Similarity=0.291 Sum_probs=68.6
Q ss_pred hCCCcceEEEEEE---------eCCCCCCCcceEEEEEeCCeeEeeeCCCC-CCcceeEEcccccCceEEecCC--CC-C
Q psy9639 175 LTRDFGREGWLWK---------TGPKNADAYRKRWFTLDYRKLMYHEEPLS-AYPKGEIFLGHCSDGYTVRLGV--PP-G 241 (321)
Q Consensus 175 ~~~~~~k~G~L~K---------~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~-~~~~g~i~L~~~~~~~~V~~~~--~~-~ 241 (321)
++...-+.|+|.. +.+.+.++||.-|-+|+|..||+-+++-. .+.+-.-.|. +..+|+... +. +
T Consensus 502 psa~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~LkG~vLYlqkDey~p~kalse~~lk---navsvHHALAt~Atd 578 (774)
T KOG0932|consen 502 PSAATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLKGMVLYLQKDEYKPGKALSESDLK---NAVSVHHALATPATD 578 (774)
T ss_pred CCchhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHhhheEEeeccccCcccchhhhhhh---hhhhhhhhhcCCCcc
Confidence 3445678999964 34455679999999999999988776521 1111111122 222333321 11 1
Q ss_pred CCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 242 AKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 242 ~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
-..++|+|.|.|.+ |.|.|+|+|.+||+.||.-|+-+.
T Consensus 579 Y~KKp~Vf~lrtAdwrv~LFQaps~eEmqsWi~rIN~vA 617 (774)
T KOG0932|consen 579 YSKKPHVFKLRTADWRVFLFQAPSQEEMQSWIERINLVA 617 (774)
T ss_pred cccCCceEEEEeccceeEEEeCCCHHHHHHHHHHHHHHH
Confidence 23467999999875 999999999999999999999854
No 116
>KOG1739|consensus
Probab=97.82 E-value=3.5e-05 Score=73.26 Aligned_cols=91 Identities=20% Similarity=0.214 Sum_probs=73.5
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC--CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP--LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP 254 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~--~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~ 254 (321)
..+..+|+|.|-.... .+|+-|||+|+.+.|.||+++ .+--++|.|.|.....++ .....+.|.|.+.
T Consensus 22 gw~e~~G~lskwtnyi-~gwqdRyv~lk~g~Lsyykse~E~~hGcRgsi~l~ka~i~a---------hEfDe~rfdIsvn 91 (611)
T KOG1739|consen 22 GWVERCGVLSKWTNYI-HGWQDRYVVLKNGALSYYKSEDETEHGCRGSICLSKAVITA---------HEFDECRFDISVN 91 (611)
T ss_pred Cchhhcceeeeeeccc-ccccceEEEEcccchhhhhhhhhhhcccceeeEeccCCccc---------ccchhheeeeEec
Confidence 3456789998887766 799999999999999999986 444589999997642221 1123467999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 255 QRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 255 ~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
.-..++.|.+.+.++.|+++|..
T Consensus 92 ~nv~~lra~~~~hr~~w~d~L~w 114 (611)
T KOG1739|consen 92 DNVWYLRAQDPDHRQQWIDALEW 114 (611)
T ss_pred cceeeehhcCcHHHHHHHHHHHH
Confidence 99999999999999999999987
No 117
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.80 E-value=0.00043 Score=55.49 Aligned_cols=93 Identities=17% Similarity=0.280 Sum_probs=66.4
Q ss_pred eeEEEeecCCC-----CCceeeEEEEeccCCeEEeecC-C-CCCc----eeEEeccceEEEeccC--CCCC--CceeEEE
Q psy9639 60 DGFLMKRGKES-----GKYHPRRFVLNEINDTIKYYVK-E-KKEP----KATLRISELNVVIAPS--KIEH--PHSLQLT 124 (321)
Q Consensus 60 ~G~L~K~g~~~-----~~wk~R~fvL~~~~~~L~Yy~~-~-~~~p----kg~I~l~~~~~~~~~~--~~~~--~~~~~i~ 124 (321)
-.||+|-++.. +.-++|||-|.....+|.+... . ...+ .+.|.|.++..+.... ..+. +. +...
T Consensus 12 G~~l~Ky~r~~~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~~~-~~~s 90 (123)
T PF12814_consen 12 GEWLYKYTRKGRSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKKPD-HNKS 90 (123)
T ss_pred ccEEEEEcccccCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccccc-cceE
Confidence 46899977665 6799999999988889988875 2 1222 2468888886654321 1111 11 3444
Q ss_pred EeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 125 FMKDGSTRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
+.+.+..|++.|-|.+.++.+-|+++|+.
T Consensus 91 i~i~t~~R~L~l~a~s~~~~~~W~~aL~~ 119 (123)
T PF12814_consen 91 IIIVTPDRSLDLTAPSRERHEIWFNALRY 119 (123)
T ss_pred EEEEcCCeEEEEEeCCHHHHHHHHHHHHH
Confidence 55667789999999999999999999974
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=97.79 E-value=5.9e-05 Score=74.74 Aligned_cols=98 Identities=20% Similarity=0.279 Sum_probs=62.2
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcc-----------------eeE--EcccccCceEEecCCC
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPK-----------------GEI--FLGHCSDGYTVRLGVP 239 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~-----------------g~i--~L~~~~~~~~V~~~~~ 239 (321)
.+..|.+.+.+... .||+||+.+.+..+--.....+..|+ -.| ++...+.+|.|-....
T Consensus 373 ~~~~g~~~~~~~~~--~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (496)
T PTZ00283 373 TLYEGIVKKQSSDL--SWKRRYLCIRGELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKYT 450 (496)
T ss_pred eeeeeEEecccCCc--ccceeEEEEeeecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHhh
Confidence 46789998877665 69999999974322211111111111 112 4444444454432211
Q ss_pred CCCCCCCceEEEEe-CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639 240 PGAKDQGFTFTLKT-PQRWYQFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 240 ~~~~~~~~~F~i~t-~~r~~~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
. .+.+|.|.|.+ ++|.+.|+|.++++++.||.+||++++
T Consensus 451 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (496)
T PTZ00283 451 G--SNAAHVFAVAFKTGRRLLFQARSDPERDAWMQKIQSVLG 490 (496)
T ss_pred C--CCCCcEEEEEecCCcEEEEecCCchhHHHHHHHHHHhcC
Confidence 1 13579999984 689999999999999999999998875
No 119
>KOG3751|consensus
Probab=97.77 E-value=7.7e-05 Score=71.67 Aligned_cols=101 Identities=22% Similarity=0.316 Sum_probs=66.7
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcc--cccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLG--HCSDGYTVRLGVPPGAKDQGFTFTLKTP 254 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~--~~~~~~~V~~~~~~~~~~~~~~F~i~t~ 254 (321)
....++|+|+-++... |+|||-||+|+..-|||+-..+...|+..-.|. ...++|+.--..-.-....+++|-|...
T Consensus 315 ~~pei~GfL~~K~dgk-KsWKk~yf~LR~SGLYys~K~tsk~~r~Lq~l~~~~~snVYt~i~~rKkyksPTd~~f~~K~~ 393 (622)
T KOG3751|consen 315 SPPEIQGFLYLKEDGK-KSWKKHYFVLRRSGLYYSTKGTSKEPRHLQCLADLHSSNVYTGIGGRKKYKSPTDYGFCIKPN 393 (622)
T ss_pred CCccccceeeeccccc-ccceeEEEEEecCcceEccCCCCCCchhhHHHHhcccCceEEeecchhccCCCCCceEEeeec
Confidence 3457899999887666 899999999999999998877776665322221 1224454432110000112466666632
Q ss_pred ----C-e-EEEEEcCCHHHHHHHHHHHhhc
Q psy9639 255 ----Q-R-WYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 255 ----~-r-~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
. | -=+|+||++..+..|+.||+-+
T Consensus 394 ~~~~~~r~lk~lCAEDe~t~~~WltAiRl~ 423 (622)
T KOG3751|consen 394 KLRNKRRFLKMLCAEDEQTRTCWLTAIRLL 423 (622)
T ss_pred cccCcccceeeeecccchhHHHHHHHHHHH
Confidence 1 2 3368999999999999999874
No 120
>KOG0521|consensus
Probab=97.72 E-value=1.8e-05 Score=81.45 Aligned_cols=104 Identities=17% Similarity=0.328 Sum_probs=77.0
Q ss_pred cccceeeEEEeecCC-CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639 55 ITGHMDGFLMKRGKE-SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 55 ~~~~~~G~L~K~g~~-~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R 132 (321)
....++|+|.|+... .+.|.||||-.. ++.|.|+.. .+......++|-.+.+...+.......+|+| .+.++
T Consensus 272 ~~~~~~~~l~~k~~~~~~tw~r~~f~~q--~~~l~~~~r~~~~~~~~~~dL~~csvk~~~~~~drr~CF~i----iS~tk 345 (785)
T KOG0521|consen 272 LGYRMEGYLRKKASNASKTWKRRWFSIQ--DGQLGYQHRGADAENVLIEDLRTCSVKPDAEQRDRRFCFEI----ISPTK 345 (785)
T ss_pred chhhhhhhhhhhcccchhhHHhhhhhhh--ccccccccccccccccccccchhccccCCcccccceeeEEE----ecCCc
Confidence 355778999988766 688999999998 899999998 5555455555555543322322345556554 34789
Q ss_pred EEEEEeCChHHHHHHHHHHHhhhhhhccccCC
Q psy9639 133 HIYVYHEESQSIMNWYHAIRNAKFHRLQVAFP 164 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p 164 (321)
++.++|+|+.+..+|+.+|+.+....+...+|
T Consensus 346 s~~lQAes~~d~~~Wi~~i~nsi~s~l~~~~~ 377 (785)
T KOG0521|consen 346 SYLLQAESEKDCQDWISALQNSILSALNSAFL 377 (785)
T ss_pred ceEEecCchhHHHHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999988766655544
No 121
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=97.62 E-value=0.00037 Score=52.76 Aligned_cols=82 Identities=20% Similarity=0.231 Sum_probs=60.4
Q ss_pred CCcceEEEEEe----CCeeEeeeC--CCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-CCeEEEEEcCCHH
Q psy9639 194 DAYRKRWFTLD----YRKLMYHEE--PLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT-PQRWYQFSALSAP 266 (321)
Q Consensus 194 ~~WkkRwfvL~----~~~L~Yyk~--~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t-~~r~~~f~A~s~~ 266 (321)
..|+|.=.+|. |..|.+|-. ++...|+-.|+...+.+ |+.+.+-...++.+.|.|.. ++--|.|.|.+++
T Consensus 19 ~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~E---vR~tt~LEmPD~~nTFvLK~~~~~eyI~Ea~d~~ 95 (107)
T cd01231 19 ARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISE---VRECTRLEMPDNLYTFVLKVDDNTDIIFEVGDEQ 95 (107)
T ss_pred cccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhh---hhhcccccccCcccEEEEEecCCceEEEEcCCHH
Confidence 47888666665 445555555 78888988888877654 45554444456778999985 4578999999999
Q ss_pred HHHHHHHHHhhc
Q psy9639 267 DRDQWIQAVQTG 278 (321)
Q Consensus 267 e~~~Wv~aL~~a 278 (321)
+|++|+..|+.|
T Consensus 96 q~~SWla~Ir~C 107 (107)
T cd01231 96 QLNSWLAELRYC 107 (107)
T ss_pred HHHHHHHHHhcC
Confidence 999999999864
No 122
>KOG0248|consensus
Probab=97.62 E-value=2.2e-05 Score=77.33 Aligned_cols=93 Identities=11% Similarity=0.284 Sum_probs=74.3
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP 254 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~ 254 (321)
....++||+.+.+.+. +.|+||||+++.+.+.||+.+.+ .+|+|.|++.+. +.+.. .+....|++++.
T Consensus 247 e~~ekSgy~~~~~s~~-k~lkrr~~v~k~gqi~~y~~~~~~~~~p~s~~d~~s~---~~~~~------~~~s~~fqli~~ 316 (936)
T KOG0248|consen 247 ETMEKSGYWTQLTSRI-KSLKRRYVVFKNGQISFYRKHNNRDEEPASKIDIRSV---TKLEQ------QGAAYAFQLITS 316 (936)
T ss_pred chhhcccchhcchHHH-HHHHhHheeeccceEEEEEcCCCccccccCccccccc---ceeec------cchhHHhhhhhh
Confidence 3457899999999777 89999999999999999998754 568888887542 33221 123467999999
Q ss_pred CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 255 QRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 255 ~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
..+|+|-++|+.-..+|+..|+.+|
T Consensus 317 t~~~~~~~~s~~lt~dw~~iL~~~i 341 (936)
T KOG0248|consen 317 TDKMNFMTESERTTHDWVTILSAAI 341 (936)
T ss_pred ceeEEEeccChhhhhhhHHHHHHHH
Confidence 9999999999999999999888766
No 123
>cd01262 PH_PDK1 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. 3-Phosphoinositide dependent protein kinase 1 (PDK1) pleckstrin homology (PH) domain. PDK1 contains an N-terminal serine/threonine kinase domain followed by a PH domain. Following binding of the PH domain to PtdIns(3,4,5)P3 and PtdIns(3,4)P2, PDK1 activates kinases such as Akt (PKB). PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.60 E-value=0.00051 Score=51.19 Aligned_cols=86 Identities=15% Similarity=0.175 Sum_probs=61.3
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVY 137 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~ 137 (321)
.+.|.+.|+.+. .+++|-++|. +..-|.|........||.|+++.++..+.. -.++.| .+.+++|+|+|.
T Consensus 2 l~~g~v~Kr~gl--f~kkR~LiLT-d~PrL~yvdp~~~~~KgeIp~s~~~l~v~~---~~~~~F----~I~Tp~rty~le 71 (89)
T cd01262 2 LKIGAVKKRKGL--FAKKRQLILT-NGPRLIYVDPVKKVVKGEIPWSDVELRVEV---KNSSHF----FVHTPNKVYSFE 71 (89)
T ss_pred ceeeeeeehhcc--ccceeeEEEe-cCceEEEEcCCcCeEEeEecccccceEEEE---ecCccE----EEECCCceEEEE
Confidence 368999998875 5799999999 356666666688899999999994333221 122344 345778999996
Q ss_pred eCChHHHHHHHHHHHhh
Q psy9639 138 HEESQSIMNWYHAIRNA 154 (321)
Q Consensus 138 a~s~~e~~~W~~aLr~a 154 (321)
|.......|+.+|..+
T Consensus 72 -D~~~~a~~W~~~I~~~ 87 (89)
T cd01262 72 -DPKGRASQWKKAIEDL 87 (89)
T ss_pred -CCCCCHHHHHHHHHHH
Confidence 4456778899998643
No 124
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.60 E-value=0.00067 Score=52.23 Aligned_cols=91 Identities=11% Similarity=0.149 Sum_probs=53.7
Q ss_pred eeeEEEeecCCC--CCceeeEEEEeccCCeEEeecC---C--C--CCce--eEEeccceEEEeccCCCCCCceeEEEEee
Q psy9639 59 MDGFLMKRGKES--GKYHPRRFVLNEINDTIKYYVK---E--K--KEPK--ATLRISELNVVIAPSKIEHPHSLQLTFMK 127 (321)
Q Consensus 59 ~~G~L~K~g~~~--~~wk~R~fvL~~~~~~L~Yy~~---~--~--~~pk--g~I~l~~~~~~~~~~~~~~~~~~~i~~~~ 127 (321)
|+|||..+.+.. ..|.+.||.....++.+.+-.- . + .... ..|.|..+++ -..+.+...++|+|+...
T Consensus 1 k~GYLy~~~k~~~~~~Wvk~y~~~~~~~~~f~m~~~~q~s~~~~~g~v~~~e~~~l~sc~~-r~~~~~dRRFCFei~~~~ 79 (104)
T cd01249 1 KEGYLYMQEKSKFGGSWTKYYCTYSKETRIFTMVPFNQKTKTDMKGAVAQDETLTLKSCSR-RKTESIDKRFCFDVEVEE 79 (104)
T ss_pred CCceEEEEcCCCCCCeEEEEEEEEEcCCcEEEEEecccccccccCcccccceEEeeeeccc-cccCCccceeeEeeeecC
Confidence 589999876543 3699888888742334322211 1 1 1111 1334433322 223345667777764322
Q ss_pred cCceEEEEEEeCChHHHHHHHHHHH
Q psy9639 128 DGSTRHIYVYHEESQSIMNWYHAIR 152 (321)
Q Consensus 128 ~~~~R~~~l~a~s~~e~~~W~~aLr 152 (321)
...++.|+|+|++++..|+.|+.
T Consensus 80 --~~~~~~lQA~Se~~~~~Wi~A~d 102 (104)
T cd01249 80 --KPGVITMQALSEKDRRLWIEAMD 102 (104)
T ss_pred --CCCeEEEEecCHHHHHHHHHhhc
Confidence 22479999999999999999874
No 125
>KOG4424|consensus
Probab=97.57 E-value=0.0001 Score=71.61 Aligned_cols=97 Identities=22% Similarity=0.331 Sum_probs=71.5
Q ss_pred hCCCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC----C-CcceeEEcccccCceEEecCCCCCCCCCCceE
Q psy9639 175 LTRDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS----A-YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTF 249 (321)
Q Consensus 175 ~~~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~----~-~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F 249 (321)
.++..+|+|-|.|.+.+. ..-+.||++|-++.|.|-+.... . .+.-.+.+. ++.|.. ......++.|
T Consensus 268 PsreLiKEG~l~Kis~k~-~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~----~~~v~~---~~~~~~~~tF 339 (623)
T KOG4424|consen 268 PSRELIKEGQLQKISAKN-GTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSIS----HMQVQE---DDNEELPHTF 339 (623)
T ss_pred cHHHHhhccceeeeeccC-CCcceeEEEEehhHHHhhhhhhhcccceeccceeeccC----cchhcc---cccccCCceE
Confidence 456779999999999886 78999999999999888765431 1 111122221 122222 1222357889
Q ss_pred EEEeCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 250 TLKTPQRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 250 ~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
.+..++|...|+|.|.++..+||++|+.+|
T Consensus 340 ~~~G~~r~vel~a~t~~ek~eWv~~I~~~I 369 (623)
T KOG4424|consen 340 ILTGKKRGVELQARTEQEKKEWVQAIQDAI 369 (623)
T ss_pred EEecccceEEeecCchhhHHHHHHHHHHHH
Confidence 999999999999999999999999999998
No 126
>PLN02866 phospholipase D
Probab=97.55 E-value=0.0006 Score=71.34 Aligned_cols=98 Identities=17% Similarity=0.314 Sum_probs=68.1
Q ss_pred ccceeeEEEee------cCC--------------CCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceE-------
Q psy9639 56 TGHMDGFLMKR------GKE--------------SGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELN------- 107 (321)
Q Consensus 56 ~~~~~G~L~K~------g~~--------------~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~------- 107 (321)
.-.+||+++|| |+. ...|.+|||||+ ++.|.|..+ .+..|..+|-+...-
T Consensus 181 ~K~~Eg~v~~r~~~~~~g~~~~~~~~~~~~~~~~~~~w~k~w~v~k--~~~l~~~~~p~~~~~~~v~lfD~~~~~~~~~~ 258 (1068)
T PLN02866 181 PKLKEGYVMVKHLPKIPKSDDSRGCFPCCCFSCCNDNWQKVWAVLK--PGFLALLEDPFDAKPLDIIVFDVLPASNGNGE 258 (1068)
T ss_pred CCcceeEEEEeccCCCCCCCccCCccccccCCeecCchheeEEEEe--ccEEEEEecCCCCceeEEEEEecccccccCCC
Confidence 34789999999 211 135999999999 999999988 777787777665211
Q ss_pred --EEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639 108 --VVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF 156 (321)
Q Consensus 108 --~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~ 156 (321)
..++.. +...+++...|.+.+++|++.|.+.|...+.+|+.+|+.+..
T Consensus 259 ~~~~~~~~-~k~~~~~~~~~~i~~~~r~l~l~~~s~~~~~~w~~ai~~~~~ 308 (1068)
T PLN02866 259 GQISLAKE-IKERNPLRFGFKVTCGNRSIRLRTKSSAKVKDWVAAINDAGL 308 (1068)
T ss_pred cceeeccc-ccccCCCcceEEEecCceEEEEEECCHHHHHHHHHHHHHHHh
Confidence 111111 111123333344557789999999999999999999988753
No 127
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.53 E-value=0.0023 Score=51.09 Aligned_cols=95 Identities=19% Similarity=0.120 Sum_probs=52.6
Q ss_pred cceEEEEEEeCCCC-------CCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCC--------C
Q psy9639 179 FGREGWLWKTGPKN-------ADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGA--------K 243 (321)
Q Consensus 179 ~~k~G~L~K~g~~~-------~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~--------~ 243 (321)
.+|.|.|......+ ...-+.+|+.|-.+.|.|-+...+.. --+++-... .-..|..+.+... .
T Consensus 3 LvK~GEL~~l~~~~~~~~~~~k~~~~~vylfLFnDlLl~tkkK~~~~-f~V~dy~~r-~~l~V~~~e~~~~~~~~~~~~~ 80 (125)
T cd01221 3 LVKRGELTQLEERGSSNILRKKLKARTIYLFLFNDLLLITKKKLGST-FVVFDYAPR-SFLRVEKIEPDNQKIPLGSNLV 80 (125)
T ss_pred eEEEeeEEEEeccCCcchhcccccCCcEEEEEecceEEEEEecCCCe-EEEEeeccc-cceEEeeccccccccccccccc
Confidence 35777776543221 11345689999999999987543211 111111110 0122332221111 0
Q ss_pred CCCceEEEEe------CCeEEEEEcCCHHHHHHHHHHH
Q psy9639 244 DQGFTFTLKT------PQRWYQFSALSAPDRDQWIQAV 275 (321)
Q Consensus 244 ~~~~~F~i~t------~~r~~~f~A~s~~e~~~Wv~aL 275 (321)
..++.|.|.. ..+.+.|+|+|++|+.+||.||
T Consensus 81 ~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al 118 (125)
T cd01221 81 GRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSAL 118 (125)
T ss_pred CCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhc
Confidence 2467888862 2378998888888888888887
No 128
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=97.51 E-value=0.0001 Score=56.58 Aligned_cols=94 Identities=16% Similarity=0.374 Sum_probs=65.5
Q ss_pred cceeeEEEeecCCC-CCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEecc-CCCCCCceeEEEEeecCceEEE
Q psy9639 57 GHMDGFLMKRGKES-GKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAP-SKIEHPHSLQLTFMKDGSTRHI 134 (321)
Q Consensus 57 ~~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~-~~~~~~~~~~i~~~~~~~~R~~ 134 (321)
.+..|++.|-|+-+ .+|++|||-|- .+-|.+|.........-|.+.++..+.+. ..+...+|+++... + .+.+
T Consensus 3 cIvhGyi~KLGGPFls~WQ~Ry~~Lf--PNRLE~~~~~~~~~~eLi~M~~i~~V~~e~~~iK~~~CI~ik~k-~--~~k~ 77 (116)
T cd01240 3 CIVHGYIKKLGGPFLSQWQTRYFKLY--PNRLELYGESEANKPELITMDQIEDVSVEFQQIKEENCILLKIR-D--EKKI 77 (116)
T ss_pred eEEeeehhhhCCHHHHHHHHHHheeC--cceeeecccccccCCcEEEeehhhhcchhheeeccCceEEEEEc-C--CceE
Confidence 56799999999876 67999999999 78888876622233334555554332211 12345678777532 2 3668
Q ss_pred EEEeCChHHHHHHHHHHHhhh
Q psy9639 135 YVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 135 ~l~a~s~~e~~~W~~aLr~a~ 155 (321)
++.++|+-++.+|...||.+-
T Consensus 78 vlt~~d~i~l~qW~~elr~a~ 98 (116)
T cd01240 78 VLTNSDEIELKQWKKELRDAH 98 (116)
T ss_pred EEecCCcHHHHHHHHHHHHHH
Confidence 999999999999999998763
No 129
>PLN00188 enhanced disease resistance protein (EDR2); Provisional
Probab=97.50 E-value=0.00057 Score=68.86 Aligned_cols=100 Identities=21% Similarity=0.287 Sum_probs=66.6
Q ss_pred ccceeeEEEeecCCC---CCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEE---Ee
Q psy9639 56 TGHMDGFLMKRGKES---GKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLT---FM 126 (321)
Q Consensus 56 ~~~~~G~L~K~g~~~---~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~---~~ 126 (321)
.+.+||||.--|... ...++|||||. +..|.||+. ....|..+..|.....+-......+..+.-.+ |.
T Consensus 3 ~~~~eGW~y~~g~~kig~~~~~~Ry~vl~--~~~~~~yK~~P~~~~~pirs~~id~~~rVed~Gr~~~~g~~~yvl~~Yn 80 (719)
T PLN00188 3 KVVYEGWMVRYGRRKIGRSYIHMRYFVLE--SRLLAYYKKKPQDNQVPIKTLLIDGNCRVEDRGLKTHHGHMVYVLSVYN 80 (719)
T ss_pred cceEeeEEEEEcccccccccceeEEEEEe--cchhhhcccCCccccccceeeccCCCceEeecCceEEcCceEEEEEEec
Confidence 467899999988653 35889999999 999999998 33455555555444332111111122222222 33
Q ss_pred ecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639 127 KDGSTRHIYVYHEESQSIMNWYHAIRNAKFH 157 (321)
Q Consensus 127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~ 157 (321)
...+.+.+-+.|.+.+|...|+.+|..++.+
T Consensus 81 ~~~~~~~~~~~a~~~eea~~W~~a~~~a~~q 111 (719)
T PLN00188 81 KKEKYHRITMAAFNIQEALIWKEKIESVIDQ 111 (719)
T ss_pred CCCccccEEEecCCHHHHHHHHHHHHHHHhh
Confidence 3445677889999999999999999888653
No 130
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=97.49 E-value=0.00033 Score=69.04 Aligned_cols=92 Identities=21% Similarity=0.400 Sum_probs=58.8
Q ss_pred cceeeEEEeecCCCCCceeeEEEEeccCCeEE-eec-C-C-CCCceeEEeccceEEEec-cC--CCCCCceeEEEEeecC
Q psy9639 57 GHMDGFLMKRGKESGKYHPRRFVLNEINDTIK-YYV-K-E-KKEPKATLRISELNVVIA-PS--KIEHPHSLQLTFMKDG 129 (321)
Q Consensus 57 ~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~-Yy~-~-~-~~~pkg~I~l~~~~~~~~-~~--~~~~~~~~~i~~~~~~ 129 (321)
...+|||.|.+...+ |++|||.+. ++.+. .+. . + +..+...+.+..+..++. |. ...+++.|.+.+. +
T Consensus 377 v~~~G~l~k~~~~~~-wk~ry~~l~--~~~l~~~~~~~~~~~~~~~~~~~l~~~~~v~pv~~~~~~~~~~~~~i~~~--~ 451 (478)
T PTZ00267 377 VTHGGYLYKYSSDMR-WKKRYFYIG--NGQLRISLSENPENDGVAPKSVNLETVNDVFPVPEVYSQKHPNQLVLWFN--N 451 (478)
T ss_pred cccceEEeccCCCcc-hhhheEEec--CCceEEEeccccccCCCCCccccHHHhcccccccHHhcCCCCceEEEEec--C
Confidence 467999999998765 999999998 44444 333 2 2 122223444544433331 11 2346777776322 2
Q ss_pred ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 130 STRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 130 ~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
.+.+++.++|++++.+|+.+|+.+
T Consensus 452 -~~~~~~~~~~~~~~~~W~~~~~~~ 475 (478)
T PTZ00267 452 -GQKIIAYAKTAEDRDQWISKFQRA 475 (478)
T ss_pred -CcEEEEecCChHHHHHHHHHHHHH
Confidence 245677779999999999999865
No 131
>KOG3549|consensus
Probab=97.49 E-value=0.00068 Score=62.26 Aligned_cols=133 Identities=14% Similarity=0.232 Sum_probs=87.2
Q ss_pred EEEeCChHHHHHHHHHHHhhhhh----hccccCCCCChhhhhhhhCCCcceEEEEEEe--CCCCCCCcceEEEEEeCCee
Q psy9639 135 YVYHEESQSIMNWYHAIRNAKFH----RLQVAFPSANDSELVKLLTRDFGREGWLWKT--GPKNADAYRKRWFTLDYRKL 208 (321)
Q Consensus 135 ~l~a~s~~e~~~W~~aLr~a~~~----~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~--g~~~~~~WkkRwfvL~~~~L 208 (321)
.+..++.++..+|+.+|...... .++...-..+ ....++.-||.... +......++.||..|+|..+
T Consensus 240 ii~c~~a~d~~dWL~ait~Ni~~LT~~nmK~~Nrnf~-------v~~qivyMGWvne~~q~~~s~q~y~P~FLaLkG~~~ 312 (505)
T KOG3549|consen 240 IIHCDEAADLSDWLKAITDNIVGLTHLNMKLYNRNFA-------VGEQIVYMGWVNEGVQNNISWQSYKPRFLALKGTEV 312 (505)
T ss_pred eeEEhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-------ccceEEEeeeccccccCcccccccCceeEEecCcEE
Confidence 45667889999999998654321 1111111111 23356788999753 33334677899999999999
Q ss_pred EeeeCCCCCCcceeEEcccccCceE-------EecCCCCCCCCCCceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 209 MYHEEPLSAYPKGEIFLGHCSDGYT-------VRLGVPPGAKDQGFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 209 ~Yyk~~~~~~~~g~i~L~~~~~~~~-------V~~~~~~~~~~~~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+.|..|.- .+.+.......|. |.. +.+-...+++||.|... +...||+.+..+|+-+|-++.+.|+
T Consensus 313 y~F~tPPv----~t~dw~rAe~ty~vye~mfki~K-dsd~~D~R~~CF~~qs~~ge~~yfsVEl~seLa~wE~sfq~At 386 (505)
T KOG3549|consen 313 YLFETPPV----NTADWSRAEVTYKVYETMFKIVK-DSDTVDSRQHCFLLQSSGGEPRYFSVELRSELARWENSFQAAT 386 (505)
T ss_pred EEEcCCCc----chhhhhhhhhhHHHHHHHHHHhc-cccccccccceEEEEcCCCCceEEEEehhhHHHHHHHHHhhHH
Confidence 99998743 2222222222222 211 11122356899999964 6899999999999999999999987
No 132
>PF15406 PH_6: Pleckstrin homology domain
Probab=97.47 E-value=0.00035 Score=53.68 Aligned_cols=63 Identities=27% Similarity=0.411 Sum_probs=43.0
Q ss_pred eCCeeEee-eCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639 204 DYRKLMYH-EEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276 (321)
Q Consensus 204 ~~~~L~Yy-k~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~ 276 (321)
+|.-|.+| +.+....|.|+|+|..+++ ..+ +..+-|.+...+....|.|.|..|++.||.+|+
T Consensus 47 TGKGLLF~~K~~dka~P~GiinLadase------~~~----~g~~kF~f~~~G~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 47 TGKGLLFFSKAEDKASPSGIINLADASE------PEK----DGSNKFHFKIKGHKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred cCceEEEEeccccccCCcceEehhhccc------ccc----CCCceEEEEeCCceeeeecCCHHHhccHHHHhh
Confidence 44444444 4445567999999965432 111 123346666688889989999999999998886
No 133
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.41 E-value=0.00078 Score=50.64 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=55.8
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCC-------CCCCcceeEEcccccCceEEecCCCCCCCCCCceEE
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEP-------LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFT 250 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~-------~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~ 250 (321)
..+++|+|.|.... .=|.|=|.|-++.|.|-+-. .....+-.|||..+ .+... .|.
T Consensus 2 ~Lv~eg~lvel~~~---~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl----~~~~~----------~~~ 64 (96)
T cd01228 2 QLVKDSFLVELVEG---SRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADL----SFPSE----------PFR 64 (96)
T ss_pred cccccceeeeehhC---CCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHh----eecch----------hhh
Confidence 35789999988743 45778888999988885421 22234567888543 22211 144
Q ss_pred EE-eCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 251 LK-TPQRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 251 i~-t~~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
+. +++++|.|.|.|+.|+.+|+.+|+.
T Consensus 65 ~~~~~~KSf~~~asS~~Er~eW~~hI~~ 92 (96)
T cd01228 65 IHNKNGKSYTFLLSSDYERSEWRESIQK 92 (96)
T ss_pred ccccCCceEEEEecCHHHHHHHHHHHHH
Confidence 44 6889999888888888888887754
No 134
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.28 E-value=0.0052 Score=47.03 Aligned_cols=89 Identities=15% Similarity=0.167 Sum_probs=64.0
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CC-CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EK-KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY 135 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~-~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~ 135 (321)
.++|-|.-.+. =+.|+.-|. +..|.|=+. ++ =..|..|.++++..+=.+ .+.|++|.+. ..+.+.+.+-
T Consensus 5 lleg~l~~~~~----~~eR~vFLF--e~~ll~~K~~~~~y~~K~~i~~~~l~i~e~~--~~d~~~F~v~-~~~~p~~~~~ 75 (97)
T cd01222 5 LLEGRFREHGG----GKPRLLFLF--QTMLLIAKPRGDKYQFKAYIPCKNLMLVEHL--PGEPLCFRVI-PFDDPKGALQ 75 (97)
T ss_pred eeeceEEeecC----CCceEEEEe--cccEEEEEecCCeeEEEEEEEecceEEecCC--CCCCcEEEEE-ecCCCceEEE
Confidence 35676664332 235888888 888888877 43 456778888888543222 2568999884 3345568899
Q ss_pred EEeCChHHHHHHHHHHHhhh
Q psy9639 136 VYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 136 l~a~s~~e~~~W~~aLr~a~ 155 (321)
++|.|.++...|+.+|+.+.
T Consensus 76 l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 76 LTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred EEecCHHHHHHHHHHHHHHh
Confidence 99999999999999998764
No 135
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.28 E-value=0.0021 Score=51.39 Aligned_cols=78 Identities=18% Similarity=0.296 Sum_probs=52.5
Q ss_pred ceeeEEEEeccCCeEEeecC-CC-------CCceeEEeccceEEEec--cC---CCCCCceeEEEEee--cCceEEEEEE
Q psy9639 73 YHPRRFVLNEINDTIKYYVK-EK-------KEPKATLRISELNVVIA--PS---KIEHPHSLQLTFMK--DGSTRHIYVY 137 (321)
Q Consensus 73 wk~R~fvL~~~~~~L~Yy~~-~~-------~~pkg~I~l~~~~~~~~--~~---~~~~~~~~~i~~~~--~~~~R~~~l~ 137 (321)
.+.+|+.|. ++.|.|=+. .+ --|...+.+.++..... |. ....+|.|++++.. +|.++.+.++
T Consensus 27 ~~~vylfLF--nDlLl~tkkK~~~~f~V~dy~~r~~l~V~~~e~~~~~~~~~~~~~~~~~~F~ltLl~N~~gk~~el~L~ 104 (125)
T cd01221 27 ARTIYLFLF--NDLLLITKKKLGSTFVVFDYAPRSFLRVEKIEPDNQKIPLGSNLVGRPNLFLLTLLRNADDKQAELLLS 104 (125)
T ss_pred CCcEEEEEe--cceEEEEEecCCCeEEEEeeccccceEEeecccccccccccccccCCCceEEEEeeccCCCCEEEEEEE
Confidence 456899998 889988766 22 12344455544422110 00 11357888887766 4777889999
Q ss_pred eCChHHHHHHHHHHH
Q psy9639 138 HEESQSIMNWYHAIR 152 (321)
Q Consensus 138 a~s~~e~~~W~~aLr 152 (321)
|+|+.|+.+|+.||+
T Consensus 105 a~S~sdr~rWi~Al~ 119 (125)
T cd01221 105 ADSQSDRERWLSALA 119 (125)
T ss_pred CCCHHHHHHHHHhcC
Confidence 999999999999985
No 136
>KOG3723|consensus
Probab=97.09 E-value=0.00018 Score=69.89 Aligned_cols=97 Identities=20% Similarity=0.260 Sum_probs=65.7
Q ss_pred ceEEEEE-EeCCC-CCCCcceEEEEEeCCeeEeeeCC--CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC
Q psy9639 180 GREGWLW-KTGPK-NADAYRKRWFTLDYRKLMYHEEP--LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ 255 (321)
Q Consensus 180 ~k~G~L~-K~g~~-~~~~WkkRwfvL~~~~L~Yyk~~--~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~ 255 (321)
+.+|-|. |+|.. ..+.|+-|||+|.|..|.|-+.. .|.. .-.|+|..+..+-+|.. .+..+.-+-.|+|.|.+
T Consensus 736 ~iEGQLKEKKGrWRf~kRW~TrYFTLSgA~L~~~kg~s~~dS~-~~~IDl~~IRSVk~v~~--kr~~rslpKAFEIFTAD 812 (851)
T KOG3723|consen 736 LIEGQLKEKKGRWRFIKRWKTRYFTLSGAQLLFQKGKSKDDSD-DCPIDLSKIRSVKAVAK--KRRDRSLPKAFEIFTAD 812 (851)
T ss_pred hhcchhhhhccchhhhhhhccceEEecchhhhcccCCCCCCCC-CCCccHHHhhhHHHHHh--hhhhcccchhhheeecC
Confidence 5688886 44442 24789999999999999996643 2221 24588876532211211 11122234679999999
Q ss_pred eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 256 RWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 256 r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
.||.|.|.++.-.++|++-|+-|+
T Consensus 813 ~T~ILKaKDeKNAEEWlqCL~Iav 836 (851)
T KOG3723|consen 813 KTYILKAKDEKNAEEWLQCLNIAV 836 (851)
T ss_pred ceEEeecccccCHHHHHHHHHHHH
Confidence 999988888888888888887755
No 137
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.09 E-value=0.014 Score=45.43 Aligned_cols=93 Identities=13% Similarity=0.166 Sum_probs=66.3
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-----CCCCceeEEeccceEEEeccCCC----C--CCceeEEEEe
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-----EKKEPKATLRISELNVVIAPSKI----E--HPHSLQLTFM 126 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-----~~~~pkg~I~l~~~~~~~~~~~~----~--~~~~~~i~~~ 126 (321)
.++|=|.+.+...+.=+.|.|.|. |+.|.|=+. ..-..||.|.|..+.++-.++.. | -.|+|.|.-
T Consensus 3 i~~Gel~~~s~~~g~~q~R~~FLF--D~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~~~knafkl~~- 79 (109)
T cd01224 3 FLQGEATRQKQNKGWNSSRVLFLF--DHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGHTIKNSLKIYS- 79 (109)
T ss_pred eEeeeEEEEecccCCcccEEEEEe--cceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCceeEEEEEEEE-
Confidence 357888888865455568999999 999999885 22356899999998765433311 1 245666632
Q ss_pred ecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 127 KDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
......+.|+|.++++...|++||...
T Consensus 80 -~~~~~~~~f~~Kt~e~K~~Wm~a~~~e 106 (109)
T cd01224 80 -ESTDEWYLFSFKSAERKHRWLSAFALE 106 (109)
T ss_pred -cCCCeEEEEEECCHHHHHHHHHHHHHh
Confidence 233456899999999999999998654
No 138
>KOG3543|consensus
Probab=97.03 E-value=0.00016 Score=70.77 Aligned_cols=98 Identities=26% Similarity=0.369 Sum_probs=73.4
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCCeeE-----eeeCCCCCCcceeEEcccccCceEEecCCCC-CCCCCCceEEE
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLM-----YHEEPLSAYPKGEIFLGHCSDGYTVRLGVPP-GAKDQGFTFTL 251 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~-----Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~-~~~~~~~~F~i 251 (321)
+.-.+|||+--|.+..+.||+|||+|-.-.-+ -|. +....|.-.|.| +||+|.-..|. +..+..+-|.-
T Consensus 463 nmkhsgylyaig~nvwkrwkkrffvlvqvsqytfamcsyr-ekkaepqel~ql----dgytvdytdp~pglqgg~~ffna 537 (1218)
T KOG3543|consen 463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQVSQYTFAMCSYR-EKKAEPQELIQL----DGYTVDYTDPSPGLQGGKHFFNA 537 (1218)
T ss_pred ccccceeehhhhhHHHHHhHhhEEEEEEhhhhhhHhhhhh-hcccChHHHhhc----cCeeeccCCCCCccccchHHHHH
Confidence 45679999999988888999999999744332 232 233467778888 78888654332 22334466777
Q ss_pred EeCCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639 252 KTPQRWYQFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 252 ~t~~r~~~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
+-.+.+..|..+++.++.-||+|+-.|.+
T Consensus 538 vkegdtvifasddeqdr~lwvqamyratg 566 (1218)
T KOG3543|consen 538 VKEGDTVIFASDDEQDRHLWVQAMYRATG 566 (1218)
T ss_pred hccCceEEeccCchhhhhHHHHHHHHhhC
Confidence 77788999999999999999999999874
No 139
>KOG3531|consensus
Probab=96.98 E-value=0.00017 Score=72.70 Aligned_cols=91 Identities=23% Similarity=0.436 Sum_probs=75.6
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEec--cCCCCCCceeEEEEeecCceEEE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIA--PSKIEHPHSLQLTFMKDGSTRHI 134 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~--~~~~~~~~~~~i~~~~~~~~R~~ 134 (321)
..+|+|..+-++...|+|-|.|.. .-+|.+|++ .|..|..+++|-+.++.+. ++.+.+++-|.+.|.. -.|
T Consensus 925 qLsg~LlrkfknssgwqkLwvvft--~fcl~fyKS~qD~~~laslPlLgysvs~P~~~d~i~K~~vfkl~fk~----hvy 998 (1036)
T KOG3531|consen 925 QLSGYLLRKFKNSSGWQKLWVVFT--NFCLFFYKSHQDSEPLASLPLLGYSVSIPAEPDPIQKDYVFKLKFKS----HVY 998 (1036)
T ss_pred hhhHHHHHHhhccccceeeeeeec--ceeeEeecccccccccccccccccccCCCCCCCCcchhheeeeehhh----hHH
Confidence 568999998888899999999999 899999999 9999999999999866542 3345566666665533 458
Q ss_pred EEEeCChHHHHHHHHHHHhh
Q psy9639 135 YVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 135 ~l~a~s~~e~~~W~~aLr~a 154 (321)
||.|++.-....|+++|+.+
T Consensus 999 ffraes~yt~~rw~evi~~a 1018 (1036)
T KOG3531|consen 999 FFRAESYYTFERWMEVITDA 1018 (1036)
T ss_pred HHhhhhhhhhhhHHHHhhcC
Confidence 99999999999999999865
No 140
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.96 E-value=0.0069 Score=46.98 Aligned_cols=78 Identities=15% Similarity=0.231 Sum_probs=48.4
Q ss_pred CCcceEEEEEeCCeeEeeeCCC---CCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eEEEEEcCCHHHHH
Q psy9639 194 DAYRKRWFTLDYRKLMYHEEPL---SAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRD 269 (321)
Q Consensus 194 ~~WkkRwfvL~~~~L~Yyk~~~---~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~ 269 (321)
..=..||++|-...|...+... +-.-+|.+||+ +.+|...+ +..+.++.|+|..+. -+..+.+.|.+|.+
T Consensus 26 qe~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~----~i~v~~lE--d~e~~~~aFeI~G~li~~i~v~C~~~~e~~ 99 (111)
T cd01225 26 EEKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLT----GIIVTRLE--DTEALKNAFEISGPLIERIVVVCNNPQDAQ 99 (111)
T ss_pred cccceeEEEEcCceEEEEEcCCCccceEEeeeeccc----ccEEechH--hccCccceEEEeccCcCcEEEEeCCHHHHH
Confidence 3456899999999988776532 23458999995 45565322 223567899999763 45564444444444
Q ss_pred HHHHHHhh
Q psy9639 270 QWIQAVQT 277 (321)
Q Consensus 270 ~Wv~aL~~ 277 (321)
+|+..|+.
T Consensus 100 ~Wl~hL~~ 107 (111)
T cd01225 100 EWVELLNA 107 (111)
T ss_pred HHHHHHHh
Confidence 44444443
No 141
>PF15404 PH_4: Pleckstrin homology domain
Probab=96.82 E-value=0.004 Score=53.19 Aligned_cols=124 Identities=21% Similarity=0.208 Sum_probs=72.7
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC-----C------cceeEEcccccCceEEecC-----------C
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA-----Y------PKGEIFLGHCSDGYTVRLG-----------V 238 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~-----~------~~g~i~L~~~~~~~~V~~~-----------~ 238 (321)
++|.|+.+..+. ..|++++++|..+.|..|+.-... . -.-+|+|..+ -+|+-... +
T Consensus 1 ~sG~LY~K~~kh-s~F~~~~vvL~~G~Li~f~~~~Rs~tG~~~~~~~~~~~~tI~L~dc-YvYSG~lt~~DLl~~~~~~d 78 (185)
T PF15404_consen 1 MSGYLYQKPRKH-STFKKYFVVLIPGFLILFQLFKRSRTGFAKPTVHYEHYLTIPLRDC-YVYSGLLTELDLLYRNQTFD 78 (185)
T ss_pred CCceeeecCCCC-CCceEEEEEEeCCEEEEEEEEeeccCCcccceEEeEeeeeeccCCc-eEEeccchhhhhhhcccccc
Confidence 479999888877 699999999999999988763211 1 1245666543 11210000 0
Q ss_pred ---C------C--------CCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHH-------------H-----Hhhcc--cc
Q psy9639 239 ---P------P--------GAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQ-------------A-----VQTGF--TF 281 (321)
Q Consensus 239 ---~------~--------~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~-------------a-----L~~ai--~~ 281 (321)
| . ...+...||.|..+.+.-.+.++.. ..+.. + -...+ ..
T Consensus 79 ~~~Pg~~~lPRvY~DGw~S~d~d~~~~FvlW~~~kr~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 155 (185)
T PF15404_consen 79 SNNPGHHSLPRVYQDGWKSSDEDEDRCFVLWFGKKRSISRANEN---SSHHGSNDNPSESQADTSATNQGKNPNKIKMVS 155 (185)
T ss_pred CCCCCCCccccccCCCCeecCccccEEEEEEECCcccCCchhhc---ccccccccccccccccccccccccCcCcceecc
Confidence 0 0 0011236788876654333333222 22210 0 00011 24
Q ss_pred ccccCceEEEEecCCHHHHHHHHHHHHH
Q psy9639 282 TLKTPQRWYQFSALSAPDRDQWIQAVQT 309 (321)
Q Consensus 282 ~l~~~~~~~~l~a~s~~e~~~Wi~al~~ 309 (321)
.|..+.++..|.|.|..|++.|+-+|..
T Consensus 156 ~Lg~~gks~VF~ARSRqERD~WV~~I~~ 183 (185)
T PF15404_consen 156 RLGVSGKSMVFMARSRQERDLWVLAINT 183 (185)
T ss_pred ccCCCCcEEEEEeccHHHHHHHHHHHHh
Confidence 5556788999999999999999999974
No 142
>PF15404 PH_4: Pleckstrin homology domain
Probab=96.75 E-value=0.034 Score=47.53 Aligned_cols=32 Identities=16% Similarity=0.325 Sum_probs=28.4
Q ss_pred eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC
Q psy9639 59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK 92 (321)
Q Consensus 59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~ 92 (321)
++|.|..+.+.-..|+++++||. .|.|.-|..
T Consensus 1 ~sG~LY~K~~khs~F~~~~vvL~--~G~Li~f~~ 32 (185)
T PF15404_consen 1 MSGYLYQKPRKHSTFKKYFVVLI--PGFLILFQL 32 (185)
T ss_pred CCceeeecCCCCCCceEEEEEEe--CCEEEEEEE
Confidence 57999999988899999999999 788887765
No 143
>KOG3551|consensus
Probab=96.70 E-value=0.0082 Score=56.07 Aligned_cols=140 Identities=18% Similarity=0.288 Sum_probs=89.4
Q ss_pred eEEEEEEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhh--CCCcceEEEEEEeCCCC-CCCcceEEEEEeCCe
Q psy9639 131 TRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLL--TRDFGREGWLWKTGPKN-ADAYRKRWFTLDYRK 207 (321)
Q Consensus 131 ~R~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~--~~~~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~ 207 (321)
.-++++.+.|..+...|+++|..+....+..+. .++...| +..+-+-|||.++-+.. .+.|+.-+.+|+...
T Consensus 247 ~~tliLR~kdsa~A~~Wf~AiHa~v~~ll~rvl-----aE~n~~Lg~t~evkHiGWLaeq~~~~G~~~w~P~l~~lTeke 321 (506)
T KOG3551|consen 247 RHTLILRAKDSAEADSWFEAIHANVNTLLTRVL-----AEVNAMLGNTSEVKHIGWLAEQVSGGGISQWKPKLMALTEKE 321 (506)
T ss_pred cceEEEEccCcHHHHHHHHHHHHHHhhHHHHHH-----HHHHHHhhcccchhhhhhHHhhccCCChhhhhhheeeechhh
Confidence 356789999999999999999876543221110 1111111 22566789998764332 357999999999999
Q ss_pred eEeeeCCCC-----CCcceeEEcccccCceEEecCCCCC--CCCCCceEEEEeCC----eEEEEEcCCHHHHHHHHHHHh
Q psy9639 208 LMYHEEPLS-----AYPKGEIFLGHCSDGYTVRLGVPPG--AKDQGFTFTLKTPQ----RWYQFSALSAPDRDQWIQAVQ 276 (321)
Q Consensus 208 L~Yyk~~~~-----~~~~g~i~L~~~~~~~~V~~~~~~~--~~~~~~~F~i~t~~----r~~~f~A~s~~e~~~Wv~aL~ 276 (321)
|..|.+-.. ..|.-+.+|-.. . -|+...... ..+....|.+.|.. +++.|++|+..|+..|...|-
T Consensus 322 lliYes~P~~keaws~P~~~ypLvaT-R--Lvhsg~~~~s~~~g~~lsFa~RtGTrqGV~thlfrvEThrdLa~WtRslV 398 (506)
T KOG3551|consen 322 LLIYESMPWTKEAWSRPRHTYPLVAT-R--LVHSGSGKGSVIKGLTLSFATRTGTRQGVETHLFRVETHRELAAWTRSLV 398 (506)
T ss_pred hhhhhcChhhHHHhcChhhhhhhhhh-h--heecCCCCCCCcCCceEEEEEecccccceEEEEEEeccHHHHHHHHHHHH
Confidence 888876432 345556665321 1 122211111 11223567777642 899999999999999999998
Q ss_pred hc
Q psy9639 277 TG 278 (321)
Q Consensus 277 ~a 278 (321)
++
T Consensus 399 qG 400 (506)
T KOG3551|consen 399 QG 400 (506)
T ss_pred HH
Confidence 74
No 144
>PF15408 PH_7: Pleckstrin homology domain
Probab=96.66 E-value=0.0016 Score=47.69 Aligned_cols=92 Identities=18% Similarity=0.218 Sum_probs=52.3
Q ss_pred EEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCC--CCCCCceEEEEeCC-eEE
Q psy9639 182 EGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG--AKDQGFTFTLKTPQ-RWY 258 (321)
Q Consensus 182 ~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~--~~~~~~~F~i~t~~-r~~ 258 (321)
+|||+.... ..-+|||.+|++..|.+|.+.... ...++.|.+..-.....+..... .+-..|.|-...++ |..
T Consensus 1 EGYLY~~E~---~si~rRF~~L~~K~~~~~~~KGG~-~L~sF~L~~s~~s~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~~ 76 (104)
T PF15408_consen 1 EGYLYRDED---SSIQRRFVMLRSKQFNMYEDKGGQ-YLCSFQLSSSVVSHPMVNFSQAVPNLGINAFGFLMYSPSRRHV 76 (104)
T ss_pred CCeEEEecc---chHHHHHHhhhhceeEEecccCCc-eeeeeehhhhhhhcccccccccCCCCCeeEEEEEEecCCcchh
Confidence 589987643 357899999999999999887653 33445554321110000000000 01112445555554 566
Q ss_pred EEEcCCHHHHHHHHHHHhh
Q psy9639 259 QFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 259 ~f~A~s~~e~~~Wv~aL~~ 277 (321)
-+-|+|.+.|+.|+++++.
T Consensus 77 ~~FA~S~~~~~~Wi~~mN~ 95 (104)
T PF15408_consen 77 QCFASSKKVCQSWIQVMNS 95 (104)
T ss_pred hhhhhHHHHHHHHHHHhcC
Confidence 6667777777777777765
No 145
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.57 E-value=0.015 Score=45.68 Aligned_cols=93 Identities=14% Similarity=0.179 Sum_probs=49.9
Q ss_pred eEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCC------CcceeEEcccccCceEEecCCCCCCC----CCCceEE
Q psy9639 181 REGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSA------YPKGEIFLGHCSDGYTVRLGVPPGAK----DQGFTFT 250 (321)
Q Consensus 181 k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~------~~~g~i~L~~~~~~~~V~~~~~~~~~----~~~~~F~ 250 (321)
.-|.|.-+.... ..=+.||..|-+..|..-|...+. .-+-.+.|.. +.|......+.. .-.++|.
T Consensus 6 ~DGelk~k~~~~-~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~----~~I~~~~~~d~~~~~~~~~~~f~ 80 (116)
T cd01223 6 LDGEVRIKASED-QKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLAD----YKIENNPSRDTEGRDTRWKYGFY 80 (116)
T ss_pred cCCceEEeEecc-CCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhhe----eeeEecCccCcccCCcceEEEEE
Confidence 345555444332 345689999999988888855442 2234455532 444443211211 2357888
Q ss_pred EEeCC--eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 251 LKTPQ--RWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 251 i~t~~--r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
|...+ -.|.|.|.|++++..||+||..|
T Consensus 81 L~~~~~~~~~~f~~Ktee~K~kWm~al~~a 110 (116)
T cd01223 81 LAHKQGKTGFTFYFKTEHLRKKWLKALEMA 110 (116)
T ss_pred EEecCCCccEEEEeCCHHHHHHHHHHHHHH
Confidence 88643 46674444444444444444443
No 146
>KOG3723|consensus
Probab=96.57 E-value=0.00086 Score=65.27 Aligned_cols=98 Identities=17% Similarity=0.303 Sum_probs=65.4
Q ss_pred ceeeEEE-eecC--CCCCceeeEEEEeccCCeEEeecC--CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639 58 HMDGFLM-KRGK--ESGKYHPRRFVLNEINDTIKYYVK--EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 58 ~~~G~L~-K~g~--~~~~wk~R~fvL~~~~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R 132 (321)
..||-|. |+|+ -.+.|+-|||+|+ +..|.|-+. .+..-...|+|..+..+-+-.+......+.-.|++-+...
T Consensus 736 ~iEGQLKEKKGrWRf~kRW~TrYFTLS--gA~L~~~kg~s~~dS~~~~IDl~~IRSVk~v~~kr~~rslpKAFEIFTAD~ 813 (851)
T KOG3723|consen 736 LIEGQLKEKKGRWRFIKRWKTRYFTLS--GAQLLFQKGKSKDDSDDCPIDLSKIRSVKAVAKKRRDRSLPKAFEIFTADK 813 (851)
T ss_pred hhcchhhhhccchhhhhhhccceEEec--chhhhcccCCCCCCCCCCCccHHHhhhHHHHHhhhhhcccchhhheeecCc
Confidence 4577776 5664 3578999999999 899999776 3333346788888754432221112222222344445557
Q ss_pred EEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639 133 HIYVYHEESQSIMNWYHAIRNAKFH 157 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~a~~~ 157 (321)
++.+.|.|++...+|++.|..+..+
T Consensus 814 T~ILKaKDeKNAEEWlqCL~IavAH 838 (851)
T KOG3723|consen 814 TYILKAKDEKNAEEWLQCLNIAVAH 838 (851)
T ss_pred eEEeecccccCHHHHHHHHHHHHHH
Confidence 7999999999999999988766443
No 147
>KOG4236|consensus
Probab=96.50 E-value=0.0037 Score=61.01 Aligned_cols=98 Identities=17% Similarity=0.257 Sum_probs=70.7
Q ss_pred CCcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCC---CCCCCCCceEEEEe
Q psy9639 177 RDFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVP---PGAKDQGFTFTLKT 253 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~---~~~~~~~~~F~i~t 253 (321)
....++||+..-..+. ..-||.|..|+..++..|.++....--..|+|+.+ .+|+.... -..+..+|||+|.|
T Consensus 411 st~~kEGWmvHyt~~d-~lRkrHYWrldsk~itlfqn~s~~ryYkeIPLsEI---l~v~~~~~~~~vp~~~~phcFEI~T 486 (888)
T KOG4236|consen 411 STKLKEGWMVHYTSKD-NLRKRHYWRLDSKCITLFQNESTNRYYKEIPLSEI---LSVSSNNGFSLVPAGTNPHCFEIRT 486 (888)
T ss_pred hhhhhcceEEEEechh-hhhhhhhheeccceeEeeecCCCceeEEeecHHHh---heeeccCCcccCCCCCCCceEEEEe
Confidence 4568999998655443 24566788999999999999887777788999876 33443220 12234689999999
Q ss_pred CCeEEEEEcCC------------HHHHHHHHHHHhhcc
Q psy9639 254 PQRWYQFSALS------------APDRDQWIQAVQTGF 279 (321)
Q Consensus 254 ~~r~~~f~A~s------------~~e~~~Wv~aL~~ai 279 (321)
..-+ ||-.++ .+..+.|-.||+.|.
T Consensus 487 ~~~v-yfVge~p~~~~~~~~g~g~d~a~~w~~ai~~al 523 (888)
T KOG4236|consen 487 ATTV-YFVGENPSSTPGGESGVGLDAAQGWETAIQQAL 523 (888)
T ss_pred eeEE-EEecCCCCCCccccccccchhhccCchhhhhcc
Confidence 8844 455555 345899999999986
No 148
>KOG0818|consensus
Probab=96.45 E-value=0.0013 Score=63.02 Aligned_cols=45 Identities=22% Similarity=0.270 Sum_probs=39.6
Q ss_pred ccchHHHHhhhccC------CCCCCCCCCCCChH-HHHHHHHHhhhhccccc
Q psy9639 4 IGNNVSKLKYEMRV------PASYKVPTSSCPQV-LLKEWIRSKYEREEFRH 48 (321)
Q Consensus 4 ~gn~~~~~~~e~~~------p~~~~~p~~~~~~~-~~e~~ir~ky~~~~f~~ 48 (321)
+.|..||.+||..| -.+++||+|.|... .+++||||||+...|+.
T Consensus 67 Ln~~gaNsIWEh~Lld~st~~sg~rk~~pqD~~Hp~K~eFIkaKy~~LtFv~ 118 (669)
T KOG0818|consen 67 LNNNGANSIWEHSLLDPATIMSGRRKANPQDKVHPNKAEFIRAKYQMLAFVH 118 (669)
T ss_pred HHhcCcchhhhhhccCchhhhcccCCCCCcCCCCccHHHHHHHHHHheeeec
Confidence 46778999999977 23789999999887 99999999999999997
No 149
>KOG1739|consensus
Probab=96.44 E-value=0.0041 Score=59.57 Aligned_cols=89 Identities=16% Similarity=0.253 Sum_probs=63.6
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEE
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHI 134 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~ 134 (321)
...|+|-|--.-...|..|||||. +|.|.||++ ++-...|.|.|+.....-+. .....|.|. .+.-+.
T Consensus 25 e~~G~lskwtnyi~gwqdRyv~lk--~g~Lsyykse~E~~hGcRgsi~l~ka~i~ahE---fDe~rfdIs----vn~nv~ 95 (611)
T KOG1739|consen 25 ERCGVLSKWTNYIHGWQDRYVVLK--NGALSYYKSEDETEHGCRGSICLSKAVITAHE---FDECRFDIS----VNDNVW 95 (611)
T ss_pred hhcceeeeeecccccccceEEEEc--ccchhhhhhhhhhhcccceeeEeccCCccccc---chhheeeeE----ecccee
Confidence 346777777766778999999999 999999999 45578899999877322111 112233332 123456
Q ss_pred EEEeCChHHHHHHHHHHHhhh
Q psy9639 135 YVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 135 ~l~a~s~~e~~~W~~aLr~a~ 155 (321)
++.+.+.+.+..|+.+|.-.+
T Consensus 96 ~lra~~~~hr~~w~d~L~wmk 116 (611)
T KOG1739|consen 96 YLRAQDPDHRQQWIDALEWMK 116 (611)
T ss_pred eehhcCcHHHHHHHHHHHHHh
Confidence 888999999999999986554
No 150
>KOG1451|consensus
Probab=96.35 E-value=0.011 Score=57.95 Aligned_cols=96 Identities=20% Similarity=0.326 Sum_probs=62.8
Q ss_pred CCCcceEEEEEEeCC-CCCCCcceEEEEEeCCe--eEe--eeC--CCCCCcceeEEcccccCceEEecCCCCCCCCCCce
Q psy9639 176 TRDFGREGWLWKTGP-KNADAYRKRWFTLDYRK--LMY--HEE--PLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFT 248 (321)
Q Consensus 176 ~~~~~k~G~L~K~g~-~~~~~WkkRwfvL~~~~--L~Y--yk~--~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~ 248 (321)
..+..++|||+-+.. ...+.|-|.||+-.... +.. +.. ..+..+...+.|.+|++ +.. ++ .+++||
T Consensus 262 p~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~R----Rkt--dS-IdKRFC 334 (812)
T KOG1451|consen 262 PTPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSR----RKT--DS-IDKRFC 334 (812)
T ss_pred CCCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhcc----Ccc--cc-ccccee
Confidence 346789999997533 22379999999986332 222 111 12222344566655322 221 12 357899
Q ss_pred EEEEeCC--eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 249 FTLKTPQ--RWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 249 F~i~t~~--r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
|.|.+.+ .+..++|-|+.++..||+|+--+
T Consensus 335 FDve~~erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 335 FDVEVEERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred eeeeecccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 9999875 58999999999999999998764
No 151
>cd01258 PH_syntrophin Syntrophin pleckstrin homology (PH) domain. Syntrophin pleckstrin homology (PH) domain. Syntrophins are peripheral membrane proteins, which associate with the Duchenne muscular dystrophy protein dystrophin and other proteins to form the dystrophin glycoprotein complex (DGC). There are five syntrophin isoforms, alpha1, beta1, beta2, gamma1, and gamma2. They all contain two PH domains, with the N-teminal PH domain interupted by a PDZ domain. The N-terminal PH domain of alpha1syntrophin binds phosphatidylinositol 4,5-bisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.22 E-value=0.022 Score=44.29 Aligned_cols=87 Identities=13% Similarity=0.358 Sum_probs=56.1
Q ss_pred eEEEeecC----CCCCceeeEEEEeccCCeEEeecC-CC-----CCceeEEeccceEE-Eec--cCCC---CCCceeEEE
Q psy9639 61 GFLMKRGK----ESGKYHPRRFVLNEINDTIKYYVK-EK-----KEPKATLRISELNV-VIA--PSKI---EHPHSLQLT 124 (321)
Q Consensus 61 G~L~K~g~----~~~~wk~R~fvL~~~~~~L~Yy~~-~~-----~~pkg~I~l~~~~~-~~~--~~~~---~~~~~~~i~ 124 (321)
|||..+-. ....|+.|+++|. +..|..|+. .- ..|...-+|-++-. +++ +... +.+++|
T Consensus 3 GW~~E~~~~~~~~~~~wrP~F~aL~--~~dl~ly~s~P~s~e~w~~p~~~y~L~~~atrvv~~~~~~~~~~~~~~~F--- 77 (108)
T cd01258 3 GWVNEQLSGDDESSQRWRPRFLALK--GSEFLFFETPPLSVEDWSRPLYVYKLYDVATRLVKNSSTRRLNDQRDNCF--- 77 (108)
T ss_pred eecccccCCCCccccccceEEEEEc--CCcEEEEeCCCCCHHHHhChhhhChhHHhhhheeccCCccCcCCCCceEE---
Confidence 78887633 2368999999999 888888887 21 35555555553311 111 1122 344444
Q ss_pred EeecCce--EEEEEEeCChHHHHHHHHHHHh
Q psy9639 125 FMKDGST--RHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 125 ~~~~~~~--R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
...+++ ..-+|..++..|+..|..+|.+
T Consensus 78 -~irtg~~vesh~fsVEt~~dL~~W~raiv~ 107 (108)
T cd01258 78 -LIRTGTQVENHYLRVETHRDLASWERALVR 107 (108)
T ss_pred -EEEcCCceeeEEEEecCHHHHHHHHHHHhc
Confidence 333333 5678999999999999999863
No 152
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=96.20 E-value=0.012 Score=58.49 Aligned_cols=91 Identities=19% Similarity=0.319 Sum_probs=56.3
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCcee-------------------EEeccceEEEe-ccCCC-
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKA-------------------TLRISELNVVI-APSKI- 115 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg-------------------~I~l~~~~~~~-~~~~~- 115 (321)
..+|.+.|.++... ||+||+++.. ..+.=+.. .+..|+. .++++++..+| .|++.
T Consensus 374 ~~~g~~~~~~~~~~-w~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (496)
T PTZ00283 374 LYEGIVKKQSSDLS-WKRRYLCIRG--ELEKGETLTVDVAPKFKSLDLVLAVSKDTLEQQCISTPFSDLEDVFPVPSKYT 450 (496)
T ss_pred eeeeEEecccCCcc-cceeEEEEee--ecccCceeecCCCccchhhhhhhhhhhhhhhhhcccCchhhhcccccccHHhh
Confidence 56788888876655 9999999972 21111111 2222221 12455554444 23322
Q ss_pred --CCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 116 --EHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 116 --~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
+.+|-|.+.| ..+|.+.|.|.+.+++..|+.+|+.+
T Consensus 451 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (496)
T PTZ00283 451 GSNAAHVFAVAF---KTGRRLLFQARSDPERDAWMQKIQSV 488 (496)
T ss_pred CCCCCcEEEEEe---cCCcEEEEecCCchhHHHHHHHHHHh
Confidence 2456665543 23488999999999999999999864
No 153
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.19 E-value=0.033 Score=43.25 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=54.3
Q ss_pred ceeeEEEEeccCCeEEeecC----CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce-EEEEEEeCChHHHHHH
Q psy9639 73 YHPRRFVLNEINDTIKYYVK----EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST-RHIYVYHEESQSIMNW 147 (321)
Q Consensus 73 wk~R~fvL~~~~~~L~Yy~~----~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-R~~~l~a~s~~e~~~W 147 (321)
=..||+||. .+.|....- .+=..+|-++|++++++-..+..+.++.|+|. |+. -.+.+.+.+.+|+.+|
T Consensus 28 ~~eRyLvLF--p~~LlilS~s~r~sGf~yqGkLPL~~i~v~~lEd~e~~~~aFeI~----G~li~~i~v~C~~~~e~~~W 101 (111)
T cd01225 28 KRERYLVLF--PNVLLMLSASPRMSGFIYQGKLPLTGIIVTRLEDTEALKNAFEIS----GPLIERIVVVCNNPQDAQEW 101 (111)
T ss_pred cceeEEEEc--CceEEEEEcCCCccceEEeeeecccccEEechHhccCccceEEEe----ccCcCcEEEEeCCHHHHHHH
Confidence 467999999 778776654 33456899999999765333344667887764 322 3467788899999999
Q ss_pred HHHHHh
Q psy9639 148 YHAIRN 153 (321)
Q Consensus 148 ~~aLr~ 153 (321)
+..|.+
T Consensus 102 l~hL~~ 107 (111)
T cd01225 102 VELLNA 107 (111)
T ss_pred HHHHHh
Confidence 998864
No 154
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=96.14 E-value=0.039 Score=41.57 Aligned_cols=81 Identities=16% Similarity=0.249 Sum_probs=56.0
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC----CCC----CceeEEeccceEEEeccCCCCCCceeEEEEeecC
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK----EKK----EPKATLRISELNVVIAPSKIEHPHSLQLTFMKDG 129 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~----~~~----~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 129 (321)
.++|+|.|-. .+.=|.|-|-|. ++.|.|-+- ..+ ..+-.|+|.++.....| |.+. ..
T Consensus 4 v~eg~lvel~--~~~rK~R~~FLF--nDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~~~--------~~~~---~~ 68 (96)
T cd01228 4 VKDSFLVELV--EGSRKLRHLFLF--TDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPSEP--------FRIH---NK 68 (96)
T ss_pred cccceeeeeh--hCCCcceEEEee--ccEEEEEEeeeccCccccccceeEEEEhHHheecchh--------hhcc---cc
Confidence 4689999876 344577888888 788877542 111 33458999998542221 2221 23
Q ss_pred ceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 130 STRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 130 ~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
++.+|.|+|.|..|..+|+.+|+.
T Consensus 69 ~~KSf~~~asS~~Er~eW~~hI~~ 92 (96)
T cd01228 69 NGKSYTFLLSSDYERSEWRESIQK 92 (96)
T ss_pred CCceEEEEecCHHHHHHHHHHHHH
Confidence 468899999999999999999964
No 155
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=96.06 E-value=0.089 Score=40.33 Aligned_cols=90 Identities=18% Similarity=0.116 Sum_probs=58.2
Q ss_pred eeEEEeecCCCCCce-eeEEEEeccCCeEEeecC-CC--CCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEE
Q psy9639 60 DGFLMKRGKESGKYH-PRRFVLNEINDTIKYYVK-EK--KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIY 135 (321)
Q Consensus 60 ~G~L~K~g~~~~~wk-~R~fvL~~~~~~L~Yy~~-~~--~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~ 135 (321)
+|=|..-......=+ +..|-|. ++.|.|-.- .. -.....++|.++.++-.++..+-.|+|.|. +..+...
T Consensus 5 ~G~l~e~~~~~~kp~~rv~~FLf--ND~Lvva~~~~~~ky~~~~~~~L~~i~V~ni~D~~~~kNafki~----t~~~s~i 78 (100)
T cd01226 5 YGELEEFDVETKKPVQRVMLFLL--NDRLIVGNINAAGKYVMESTYSLNSVAVVNVKDRENAKKVLKLL----IFPESRI 78 (100)
T ss_pred cCcEEEechhhCCccceEEEEEe--ccEEEEEEecccceEEEEEEEehHHeEEEecCCCcCcCceEEEE----eCCccEE
Confidence 344444333333333 3435665 788887755 22 233568888888554445545667888764 3446677
Q ss_pred EEeCChHHHHHHHHHHHhhh
Q psy9639 136 VYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 136 l~a~s~~e~~~W~~aLr~a~ 155 (321)
++|+++++..+|+..|..++
T Consensus 79 ~qaes~~~K~eWl~~le~a~ 98 (100)
T cd01226 79 YQCESARIKTEWFEELEQAK 98 (100)
T ss_pred EEeCCHHHHHHHHHHHHHHh
Confidence 89999999999999998775
No 156
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.81 E-value=0.073 Score=41.99 Aligned_cols=75 Identities=15% Similarity=0.251 Sum_probs=43.8
Q ss_pred CcceEEEEEeCCeeEeeeCCCCC----Cc----ceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--C---eEEEEE
Q psy9639 195 AYRKRWFTLDYRKLMYHEEPLSA----YP----KGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--Q---RWYQFS 261 (321)
Q Consensus 195 ~WkkRwfvL~~~~L~Yyk~~~~~----~~----~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--~---r~~~f~ 261 (321)
.=+.|-+.|-...|.|-+...+. .| +..|.++. ..+.+. ..+.++.|.|... . .+|.++
T Consensus 23 K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~----l~l~e~----v~gd~~kF~i~~~~~~~~~~~~ilq 94 (114)
T cd01232 23 KGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQVSK----MGLTEH----VEGDPCRFALWSGDPPISDNRIILK 94 (114)
T ss_pred CCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceeeee----eEeEEc----cCCCCceEEEEeCCCCCCceEEEEE
Confidence 34567777888888887653221 12 45666643 223332 2245677888743 3 688866
Q ss_pred cCCHHHHHHHHHHHhh
Q psy9639 262 ALSAPDRDQWIQAVQT 277 (321)
Q Consensus 262 A~s~~e~~~Wv~aL~~ 277 (321)
|.|.++.+.|+..|+.
T Consensus 95 A~s~e~K~~W~~~I~~ 110 (114)
T cd01232 95 ANSQETKQEWVKKIRE 110 (114)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 6666666666666654
No 157
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.81 E-value=0.093 Score=41.32 Aligned_cols=94 Identities=16% Similarity=0.262 Sum_probs=59.1
Q ss_pred eeeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEec---cC--------C---CCCCceeEEE
Q psy9639 59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIA---PS--------K---IEHPHSLQLT 124 (321)
Q Consensus 59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~---~~--------~---~~~~~~~~i~ 124 (321)
..|-.+-+-...+.=++|.|.|.++++.|.|....+. ..+.|+|.++..+.. +. . ...+.+|.|.
T Consensus 7 ~~G~~~~K~~~~~~~~~~~f~ld~~~~~l~W~~~~~~-~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIi 85 (115)
T cd01248 7 QRGSVFIKWDDTSRERRRLFRLDEKGFFLYWKDEGKK-EKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIV 85 (115)
T ss_pred hCCCEEEEEcCCCceeeEEEEEcCCCcEEEEeCCCCc-cccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEE
Confidence 3444443332323335677999865555655544222 566788888765421 10 0 1334577887
Q ss_pred EeecCceEEEEEEeCChHHHHHHHHHHHh
Q psy9639 125 FMKDGSTRHIYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 125 ~~~~~~~R~~~l~a~s~~e~~~W~~aLr~ 153 (321)
|..+.+-.+++|.|+|.++...|+..|+.
T Consensus 86 y~~~~~~k~L~lVA~s~~~a~~W~~gL~~ 114 (115)
T cd01248 86 YGTDLNLKSLDLVAPSEEEAKTWVSGLRK 114 (115)
T ss_pred ECCCCCeeEEEEEECCHHHHHHHHHHHhh
Confidence 76654467899999999999999999873
No 158
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.78 E-value=0.094 Score=41.29 Aligned_cols=76 Identities=20% Similarity=0.346 Sum_probs=43.2
Q ss_pred ceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCC--------C---CCCCceEEEEeCC----eEEEE
Q psy9639 197 RKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPG--------A---KDQGFTFTLKTPQ----RWYQF 260 (321)
Q Consensus 197 kkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~--------~---~~~~~~F~i~t~~----r~~~f 260 (321)
++|.|.|+ ++...|+.+.... ..+.|+|..+.+ |+.+.... . .....||.|+... ++..|
T Consensus 22 ~~~~f~ld~~~~~l~W~~~~~~-~~~~l~i~~Ike---IR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L~l 97 (115)
T cd01248 22 RRRLFRLDEKGFFLYWKDEGKK-EKKVLDISSIKE---IRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSLDL 97 (115)
T ss_pred eeEEEEEcCCCcEEEEeCCCCc-cccEEEehhhhh---hhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEEEE
Confidence 46788886 3444455544321 456788876644 33322110 0 1234788888542 57777
Q ss_pred EcCCHHHHHHHHHHHh
Q psy9639 261 SALSAPDRDQWIQAVQ 276 (321)
Q Consensus 261 ~A~s~~e~~~Wv~aL~ 276 (321)
.|+|.++++.|+..|+
T Consensus 98 VA~s~~~a~~W~~gL~ 113 (115)
T cd01248 98 VAPSEEEAKTWVSGLR 113 (115)
T ss_pred EECCHHHHHHHHHHHh
Confidence 7777777777766664
No 159
>KOG3543|consensus
Probab=95.67 E-value=0.0032 Score=62.05 Aligned_cols=97 Identities=18% Similarity=0.282 Sum_probs=62.8
Q ss_pred ccceeeEEEeecCCC-CCceeeEEEEeccCCe----EEeecCCCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCc
Q psy9639 56 TGHMDGFLMKRGKES-GKYHPRRFVLNEINDT----IKYYVKEKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS 130 (321)
Q Consensus 56 ~~~~~G~L~K~g~~~-~~wk~R~fvL~~~~~~----L~Yy~~~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 130 (321)
+-..+|||+--|+.. +.||+|||||-. -.. +.-|..++.+|...|.|.+.++-..+...|-..|-.+ |.....
T Consensus 463 nmkhsgylyaig~nvwkrwkkrffvlvq-vsqytfamcsyrekkaepqel~qldgytvdytdp~pglqgg~~f-fnavke 540 (1218)
T KOG3543|consen 463 NMKHSGYLYAIGRNVWKRWKKRFFVLVQ-VSQYTFAMCSYREKKAEPQELIQLDGYTVDYTDPSPGLQGGKHF-FNAVKE 540 (1218)
T ss_pred ccccceeehhhhhHHHHHhHhhEEEEEE-hhhhhhHhhhhhhcccChHHHhhccCeeeccCCCCCccccchHH-HHHhcc
Confidence 346689999999875 789999999962 111 1112225678999999999865443322222222222 221122
Q ss_pred eEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 131 TRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 131 ~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
+-++.|..|+++++.-|++|+-.+
T Consensus 541 gdtvifasddeqdr~lwvqamyra 564 (1218)
T KOG3543|consen 541 GDTVIFASDDEQDRHLWVQAMYRA 564 (1218)
T ss_pred CceEEeccCchhhhhHHHHHHHHh
Confidence 256889999999999999998555
No 160
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.33 E-value=0.19 Score=40.69 Aligned_cols=75 Identities=11% Similarity=0.198 Sum_probs=47.7
Q ss_pred ceEEEEEeCCeeEeeeCCCC-----CC----cceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--CeEEEEEcCCH
Q psy9639 197 RKRWFTLDYRKLMYHEEPLS-----AY----PKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--QRWYQFSALSA 265 (321)
Q Consensus 197 kkRwfvL~~~~L~Yyk~~~~-----~~----~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--~r~~~f~A~s~ 265 (321)
+.|.+.|-+..+.+-|-..+ .. -+..|.++.. .+. .+..+.++.|+|.+. ..+|.|+|.|.
T Consensus 30 ~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~l----glt----e~v~gd~~kFeiw~~~~~~~yilqA~t~ 101 (133)
T cd01227 30 MQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKMTAV----GIT----ENVKGDTKKFEIWYNAREEVYILQAPTP 101 (133)
T ss_pred ceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEeecc----ccc----ccCCCCccEEEEEeCCCCcEEEEEcCCH
Confidence 56888888888887764421 11 2455655331 122 233345778999864 46888777777
Q ss_pred HHHHHHHHHHhhcc
Q psy9639 266 PDRDQWIQAVQTGF 279 (321)
Q Consensus 266 ~e~~~Wv~aL~~ai 279 (321)
+..+.|++.|+.-+
T Consensus 102 e~K~~Wv~~I~~iL 115 (133)
T cd01227 102 EIKAAWVNEIRKVL 115 (133)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777644
No 161
>COG5347 GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport [Intracellular trafficking and secretion]
Probab=95.07 E-value=0.018 Score=53.43 Aligned_cols=50 Identities=24% Similarity=0.299 Sum_probs=38.9
Q ss_pred CccccchHHHHhhhccCCCC-CCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639 1 MKQIGNNVSKLKYEMRVPAS-YKVPTSSCPQVLLKEWIRSKYEREEFRHPE 50 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~-~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~ 50 (321)
|...||..||.+||++.=.. -...........+++||+.||+.+.|+..+
T Consensus 76 m~~gGN~~a~~~~e~~~~~~~~~~~k~~yd~~v~~~y~~~ky~~~~~~~~~ 126 (319)
T COG5347 76 MEVGGNSNANRFYEKNLLDQLLLPIKAKYDSSVAKKYIRKKYELKKFIDDS 126 (319)
T ss_pred HHHhcchhhhhHhccCCCcccccccccccCHHHHHHHHHHHHHhhhccccc
Confidence 56679999999999975331 244455666678999999999999998854
No 162
>KOG1737|consensus
Probab=95.06 E-value=0.017 Score=59.42 Aligned_cols=88 Identities=19% Similarity=0.211 Sum_probs=63.9
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCC--CCcceeEEcccccCceEEecCCCCCCCCCCceEEEE-eCC
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLS--AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK-TPQ 255 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~--~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~-t~~ 255 (321)
.-.+|||.|..... ++|.+|||+|.++.|.||.+... ..+.|.|++... .+. . +....+.+. ...
T Consensus 77 ~~~~g~l~k~~n~~-~~~~~r~f~l~~g~ls~~~~~~~~~~~~~~~~~~~~a----~i~-----~--~~~~~~~~~~~~~ 144 (799)
T KOG1737|consen 77 ASLEGILLKWRNYS-KGPSSRWFVLSGGLLSYYFDNSFSKTTCGGGINLVTA----WIQ-----N--GERMDICSVDGSC 144 (799)
T ss_pred ccccceeecccccc-CCcccceEEecCcceeeeccCCccccCCCCccccccc----ccc-----c--CCCcccchhhccc
Confidence 34589999998887 89999999999999999977643 456778877331 111 1 111112222 225
Q ss_pred eEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 256 RWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 256 r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
++|+..+.+..+.+.|+.++..+
T Consensus 145 q~~~~~~~~~~~~~~~~~~~~l~ 167 (799)
T KOG1737|consen 145 QIYLVELSKKLQRQGWLHALELA 167 (799)
T ss_pred chhhhhhhHHHhhcchhhhhhhc
Confidence 78889999999999999999987
No 163
>KOG1737|consensus
Probab=94.98 E-value=0.014 Score=59.90 Aligned_cols=94 Identities=20% Similarity=0.324 Sum_probs=68.3
Q ss_pred ccceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceE
Q psy9639 56 TGHMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTR 132 (321)
Q Consensus 56 ~~~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R 132 (321)
....+|||.|--...++|.+|||+|. +|.|.||.+ ....+.|.|.+..... +..-++.++ ..+++.+
T Consensus 76 ~~~~~g~l~k~~n~~~~~~~r~f~l~--~g~ls~~~~~~~~~~~~~~~~~~~~a~i-------~~~~~~~~~-~~~~~~q 145 (799)
T KOG1737|consen 76 GASLEGILLKWRNYSKGPSSRWFVLS--GGLLSYYFDNSFSKTTCGGGINLVTAWI-------QNGERMDIC-SVDGSCQ 145 (799)
T ss_pred cccccceeeccccccCCcccceEEec--CcceeeeccCCccccCCCCccccccccc-------ccCCCcccc-hhhcccc
Confidence 34678999999999999999999999 899999976 5667778887755422 111222222 2233467
Q ss_pred EEEEEeCChHHHHHHHHHHHhhhhhhc
Q psy9639 133 HIYVYHEESQSIMNWYHAIRNAKFHRL 159 (321)
Q Consensus 133 ~~~l~a~s~~e~~~W~~aLr~a~~~~l 159 (321)
++++.+.+..+...|+.+++.+.+...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~l~~~~~~ 172 (799)
T KOG1737|consen 146 IYLVELSKKLQRQGWLHALELAPLIAV 172 (799)
T ss_pred hhhhhhhHHHhhcchhhhhhhccchhh
Confidence 788888888999999999987755433
No 164
>PF15406 PH_6: Pleckstrin homology domain
Probab=94.95 E-value=0.086 Score=40.71 Aligned_cols=61 Identities=10% Similarity=0.297 Sum_probs=43.7
Q ss_pred CCeEEeecC--CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHH
Q psy9639 84 NDTIKYYVK--EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIR 152 (321)
Q Consensus 84 ~~~L~Yy~~--~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr 152 (321)
+..|.+|.. +...|-|+|.|.+++.+ . .+.++.|.|. ..| ..--|.|.|..|++.|+.+|.
T Consensus 48 GKGLLF~~K~~dka~P~GiinLadase~-~---~~g~~kF~f~--~~G--~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 48 GKGLLFFSKAEDKASPSGIINLADASEP-E---KDGSNKFHFK--IKG--HKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred CceEEEEeccccccCCcceEehhhcccc-c---cCCCceEEEE--eCC--ceeeeecCCHHHhccHHHHhh
Confidence 566776764 67899999999998542 2 2345666654 344 334579999999999998875
No 165
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.19 E-value=0.49 Score=37.29 Aligned_cols=77 Identities=21% Similarity=0.318 Sum_probs=52.1
Q ss_pred eeeEEEEeccCCeEEeecC-CC----CCc----eeEEeccceEEEeccCCCCCCceeEEEEeecC-ceEEEEEEeCChHH
Q psy9639 74 HPRRFVLNEINDTIKYYVK-EK----KEP----KATLRISELNVVIAPSKIEHPHSLQLTFMKDG-STRHIYVYHEESQS 143 (321)
Q Consensus 74 k~R~fvL~~~~~~L~Yy~~-~~----~~p----kg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~R~~~l~a~s~~e 143 (321)
+.|.+-|. +..|.|-+. .+ ..| |..|+++++..+=.. .|.+..|.|.+.... +..+|.++|.|.++
T Consensus 25 ~eR~vFLF--e~~lvfsk~~~~~~~~~~~~Y~yK~~ikls~l~l~e~v--~gd~~kF~i~~~~~~~~~~~~ilqA~s~e~ 100 (114)
T cd01232 25 RERRVFLF--EQSIIFAKEVKKKKQFGNPKYIYKSKLQVSKMGLTEHV--EGDPCRFALWSGDPPISDNRIILKANSQET 100 (114)
T ss_pred ceeEEEEe--eceEEEEEEeccCCCCCceeEEEecceeeeeeEeEEcc--CCCCceEEEEeCCCCCCceEEEEECCCHHH
Confidence 45667776 667766665 22 233 578888888553222 356667776544332 34788999999999
Q ss_pred HHHHHHHHHhh
Q psy9639 144 IMNWYHAIRNA 154 (321)
Q Consensus 144 ~~~W~~aLr~a 154 (321)
...|+..|+..
T Consensus 101 K~~W~~~I~~i 111 (114)
T cd01232 101 KQEWVKKIREI 111 (114)
T ss_pred HHHHHHHHHHH
Confidence 99999999854
No 166
>KOG0932|consensus
Probab=94.16 E-value=0.024 Score=55.49 Aligned_cols=93 Identities=16% Similarity=0.253 Sum_probs=61.2
Q ss_pred ccceeeEEEeecC------C----CCCceeeEEEEeccCCeEEeecCCCC---------CceeEEeccceEEEeccCCCC
Q psy9639 56 TGHMDGFLMKRGK------E----SGKYHPRRFVLNEINDTIKYYVKEKK---------EPKATLRISELNVVIAPSKIE 116 (321)
Q Consensus 56 ~~~~~G~L~K~g~------~----~~~wk~R~fvL~~~~~~L~Yy~~~~~---------~pkg~I~l~~~~~~~~~~~~~ 116 (321)
...+.|+|..+-. . ..+||.=|-||+ |.+.||.++.- ..+-.|.|-+.-++-++.-..
T Consensus 505 ~~Yk~G~L~RK~had~DgkKTPrGkRgWk~fya~Lk---G~vLYlqkDey~p~kalse~~lknavsvHHALAt~AtdY~K 581 (774)
T KOG0932|consen 505 ATYKSGFLARKYHADMDGKKTPRGKRGWKMFYAVLK---GMVLYLQKDEYKPGKALSESDLKNAVSVHHALATPATDYSK 581 (774)
T ss_pred hhhhhhhhhhhhhccccCCcCCccchhHHHHHHHHh---hheEEeeccccCcccchhhhhhhhhhhhhhhhcCCCccccc
Confidence 4578899886421 1 246998888996 67777766111 233344444443333454455
Q ss_pred CCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 117 HPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 117 ~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
++|-|++. ....|.|.|+|.+.++|..|+..|.-.
T Consensus 582 Kp~Vf~lr---tAdwrv~LFQaps~eEmqsWi~rIN~v 616 (774)
T KOG0932|consen 582 KPHVFKLR---TADWRVFLFQAPSQEEMQSWIERINLV 616 (774)
T ss_pred CCceEEEE---eccceeEEEeCCCHHHHHHHHHHHHHH
Confidence 77877764 234499999999999999999988644
No 167
>KOG4807|consensus
Probab=93.74 E-value=0.00091 Score=62.24 Aligned_cols=79 Identities=27% Similarity=0.532 Sum_probs=64.1
Q ss_pred CCcceEEEEEeCCeeEeeeCCCC---CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHH
Q psy9639 194 DAYRKRWFTLDYRKLMYHEEPLS---AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQ 270 (321)
Q Consensus 194 ~~WkkRwfvL~~~~L~Yyk~~~~---~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~ 270 (321)
..|++-||+|.+..+.||.+... ....|.|+|.+|+.+..+.. ...+.|.|.+.+-+|.|.|-+..-...
T Consensus 33 ~~~~k~~~~~~~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e~a~-------q~nY~~~i~~~~~~~tL~~~~s~Ir~~ 105 (593)
T KOG4807|consen 33 SQWKKHWFVLTDSSLKYYRDSTAEEADELDGEIDLRSCTDVTEYAV-------QRNYGFQIHTKDAVYTLSAMTSGIRRN 105 (593)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcccCCccccHHHHHHHHHHHH-------HhccceeecccchhhhhHHHHHHHHHH
Confidence 47999999999999999987633 24578999988765432211 356889999999999999999999999
Q ss_pred HHHHHhhcc
Q psy9639 271 WIQAVQTGF 279 (321)
Q Consensus 271 Wv~aL~~ai 279 (321)
|+.|+.+.+
T Consensus 106 ~~~A~~kT~ 114 (593)
T KOG4807|consen 106 WIEALRKTV 114 (593)
T ss_pred HHHHHHhcc
Confidence 999999854
No 168
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=93.68 E-value=0.29 Score=37.28 Aligned_cols=80 Identities=18% Similarity=0.340 Sum_probs=50.8
Q ss_pred CCceeeEEEEecc--CCeEEeecC---CCCCceeEEeccceEEEeccC---CCCCCceeEEEEeecCceEEEEEEeCChH
Q psy9639 71 GKYHPRRFVLNEI--NDTIKYYVK---EKKEPKATLRISELNVVIAPS---KIEHPHSLQLTFMKDGSTRHIYVYHEESQ 142 (321)
Q Consensus 71 ~~wk~R~fvL~~~--~~~L~Yy~~---~~~~pkg~I~l~~~~~~~~~~---~~~~~~~~~i~~~~~~~~R~~~l~a~s~~ 142 (321)
..|.|...+|... +..|.+|.. +...||-.|....+..+.... -..+.|-|.+ ..+++ --|.|-|.|++
T Consensus 19 ~~WqkcRl~L~~~~gg~~le~~~~~pPKssrpk~~v~C~~I~EvR~tt~LEmPD~~nTFvL--K~~~~-~eyI~Ea~d~~ 95 (107)
T cd01231 19 ARWQRGRLVLRKAVGGYMLEFYLPLPPKSSKPKLQVACSSISEVRECTRLEMPDNLYTFVL--KVDDN-TDIIFEVGDEQ 95 (107)
T ss_pred cccceeeEEEEecCCCceEEEEccCCCCCCCCccccchhhhhhhhhcccccccCcccEEEE--EecCC-ceEEEEcCCHH
Confidence 4699988888653 345554443 667788777666554332211 1234455544 23332 35888999999
Q ss_pred HHHHHHHHHHh
Q psy9639 143 SIMNWYHAIRN 153 (321)
Q Consensus 143 e~~~W~~aLr~ 153 (321)
++..|+..||.
T Consensus 96 q~~SWla~Ir~ 106 (107)
T cd01231 96 QLNSWLAELRY 106 (107)
T ss_pred HHHHHHHHHhc
Confidence 99999999974
No 169
>PF15408 PH_7: Pleckstrin homology domain
Probab=92.98 E-value=0.096 Score=38.56 Aligned_cols=89 Identities=17% Similarity=0.370 Sum_probs=51.7
Q ss_pred eeEEEeecCCCCCceeeEEEEeccCCeEEeecCCCCCceeEEeccceEEEeccC---CCCCCc-eeEE-EE-eecCceEE
Q psy9639 60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVKEKKEPKATLRISELNVVIAPS---KIEHPH-SLQL-TF-MKDGSTRH 133 (321)
Q Consensus 60 ~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~~~~~pkg~I~l~~~~~~~~~~---~~~~~~-~~~i-~~-~~~~~~R~ 133 (321)
||||..... +.-+||+.+|+ +..|-+|.++...-..+..|...... +|- +...+| |+.- -| +...+.|.
T Consensus 1 EGYLY~~E~--~si~rRF~~L~--~K~~~~~~~KGG~~L~sF~L~~s~~s-~Pm~~~~~A~~N~Gi~A~G~L~~~~~~~~ 75 (104)
T PF15408_consen 1 EGYLYRDED--SSIQRRFVMLR--SKQFNMYEDKGGQYLCSFQLSSSVVS-HPMVNFSQAVPNLGINAFGFLMYSPSRRH 75 (104)
T ss_pred CCeEEEecc--chHHHHHHhhh--hceeEEecccCCceeeeeehhhhhhh-cccccccccCCCCCeeEEEEEEecCCcch
Confidence 578876542 45778888998 77777777732223344444432111 111 111223 3321 11 22334478
Q ss_pred EEEEeCChHHHHHHHHHHHh
Q psy9639 134 IYVYHEESQSIMNWYHAIRN 153 (321)
Q Consensus 134 ~~l~a~s~~e~~~W~~aLr~ 153 (321)
+-+.|+|.+.+..|++++..
T Consensus 76 ~~~FA~S~~~~~~Wi~~mN~ 95 (104)
T PF15408_consen 76 VQCFASSKKVCQSWIQVMNS 95 (104)
T ss_pred hhhhhhHHHHHHHHHHHhcC
Confidence 88889999999999999853
No 170
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=91.87 E-value=1.1 Score=36.51 Aligned_cols=33 Identities=15% Similarity=0.027 Sum_probs=12.7
Q ss_pred ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeC
Q psy9639 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEE 213 (321)
Q Consensus 180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~ 213 (321)
+.+|-|.+++... ..|-.=.+.|-++.|..-|.
T Consensus 2 i~~G~L~Rk~~~~-~~~~di~~~LFDh~Lll~K~ 34 (135)
T PF15405_consen 2 IYKGDLKRKGDNS-FNWVDIHVYLFDHYLLLTKP 34 (135)
T ss_dssp ----------------S-EEEEEEESSEEEEEEE
T ss_pred ccccccccccccc-cccceeEEEeeccEEEEEEE
Confidence 5678888888776 57878778888887776654
No 171
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=91.64 E-value=1.6 Score=35.48 Aligned_cols=28 Identities=14% Similarity=0.541 Sum_probs=20.8
Q ss_pred CceEEEEecCCHHHHHHHHHHHHHhhcC
Q psy9639 286 PQRWYQFSALSAPDRDQWIQAVQTVLDT 313 (321)
Q Consensus 286 ~~~~~~l~a~s~~e~~~Wi~al~~~i~~ 313 (321)
|.++|+|||-+++.+.+.++.|+.+|.+
T Consensus 129 pE~vfqLCcS~~E~k~~flK~Irsilre 156 (160)
T cd01255 129 PEKVFVLCCSTAESRNAFLKTIRSILRE 156 (160)
T ss_pred CcceEEEecCCHHHHHHHHHHHHHHHHH
Confidence 5556668888888888888888877653
No 172
>KOG1738|consensus
Probab=91.17 E-value=0.036 Score=55.01 Aligned_cols=63 Identities=17% Similarity=0.384 Sum_probs=51.5
Q ss_pred ccceeeEEEeecCCC---CCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccCCCCCCce
Q psy9639 56 TGHMDGFLMKRGKES---GKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPSKIEHPHS 120 (321)
Q Consensus 56 ~~~~~G~L~K~g~~~---~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~~~~~~~~ 120 (321)
.|..+|||++++... ..|++=||||. ++.|..|.+ .++.+.++|.|...+...+.+..++++-
T Consensus 561 ~G~~qg~~~r~k~~~~~~~kW~k~~~~l~--~~~l~~y~n~~~~~~e~~i~l~~~~i~~a~e~~~~~~~ 627 (638)
T KOG1738|consen 561 RGDRQGWLTRLKLNHLTQEKWRKIWMVLN--DDPLLNYRNHRVRAAESVIKLPLFTISVAEEVLGKPEL 627 (638)
T ss_pred cchhhccchhhccchHHHHHhhhheeeec--CchhhhhhhhhhhchhheeeccchhhhhHHHhccCHhh
Confidence 578899999988663 45999999999 999999999 9999999999998866666655555543
No 173
>PF15411 PH_10: Pleckstrin homology domain
Probab=90.57 E-value=2.3 Score=33.61 Aligned_cols=78 Identities=17% Similarity=0.220 Sum_probs=56.5
Q ss_pred CCceeeEEEEeccCCeEEeecC-CC-------------------CCceeEEeccceEEEeccCCCCCCceeEEEEeecCc
Q psy9639 71 GKYHPRRFVLNEINDTIKYYVK-EK-------------------KEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGS 130 (321)
Q Consensus 71 ~~wk~R~fvL~~~~~~L~Yy~~-~~-------------------~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 130 (321)
..|+...+-|. +..|..++. .. -..||.|-|.++..+..... ...+.++|....+..
T Consensus 19 ~~erE~~vYLF--e~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~v~~~s~-~g~~~L~i~w~~d~e 95 (116)
T PF15411_consen 19 DSEREYEVYLF--EKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITEVSSSSK-PGSYSLQISWKGDPE 95 (116)
T ss_pred Ccceeeeeeee--eeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeeeeeccCC-CCceEEEEEEcCCCC
Confidence 55888888887 677777765 11 13478899998866554432 345778887755555
Q ss_pred eEEEEEEeCChHHHHHHHHHH
Q psy9639 131 TRHIYVYHEESQSIMNWYHAI 151 (321)
Q Consensus 131 ~R~~~l~a~s~~e~~~W~~aL 151 (321)
.-++.++-.+++++..|-.+|
T Consensus 96 ~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 96 LENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred CceEEEEeCCHHHHHHHHhhC
Confidence 678999999999999998764
No 174
>KOG1451|consensus
Probab=89.97 E-value=0.9 Score=45.09 Aligned_cols=97 Identities=12% Similarity=0.148 Sum_probs=63.6
Q ss_pred cccceeeEEEeecC--CCCCceeeEEEEeccCCeEEe--ecC---CCCCceeEEeccceEEEeccCCCCCCceeEEEEee
Q psy9639 55 ITGHMDGFLMKRGK--ESGKYHPRRFVLNEINDTIKY--YVK---EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMK 127 (321)
Q Consensus 55 ~~~~~~G~L~K~g~--~~~~wk~R~fvL~~~~~~L~Y--y~~---~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~ 127 (321)
....++|||+-+-+ ....|-+-||+-..+...+.. +.. .+-.+..++.|..|.. ...+.+.+.+||.+.-.
T Consensus 263 ~p~t~eGYlY~QEK~~~g~sWvKyYC~Y~retk~~TMvp~~qk~g~k~g~~~~~~lKsC~R-RktdSIdKRFCFDve~~- 340 (812)
T KOG1451|consen 263 TPSTKEGYLYMQEKSKIGKSWVKYYCVYSRETKIFTMVPANQKTGTKMGQTATFKLKSCSR-RKTDSIDKRFCFDVEVE- 340 (812)
T ss_pred CCcccceeeeehhhhhccchhhhheeEeecccceEEEeecccCCCCcCCCcceEEehhhcc-Ccccccccceeeeeeec-
Confidence 45689999997654 357899999999842222221 111 2334445566666632 23446778888887533
Q ss_pred cCceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 128 DGSTRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 128 ~~~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
...-++-++|-|++++..|++|+-.+
T Consensus 341 -erpgviTmQALSE~drrlWmeAMDG~ 366 (812)
T KOG1451|consen 341 -ERPGVITMQALSEKDRRLWMEAMDGA 366 (812)
T ss_pred -ccCCeeehHhhhhhHHHHHHHHhcCC
Confidence 23356889999999999999998544
No 175
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=88.79 E-value=5.4 Score=31.46 Aligned_cols=92 Identities=16% Similarity=0.215 Sum_probs=54.6
Q ss_pred eeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCC------CceeEEeccceEEEecc--CCCC----CCceeEEEEe
Q psy9639 60 DGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKK------EPKATLRISELNVVIAP--SKIE----HPHSLQLTFM 126 (321)
Q Consensus 60 ~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~------~pkg~I~l~~~~~~~~~--~~~~----~~~~~~i~~~ 126 (321)
.|-|.-+......=+.|+.-|. +..|..=+. .+. ..|..+.|.+..++..+ ...+ ..|+|-|.-
T Consensus 7 DGelk~k~~~~~k~k~RyiFLF--Dk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d~~~~~~~~~~~f~L~~- 83 (116)
T cd01223 7 DGEVRIKASEDQKTKLRYIFLF--DKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRDTEGRDTRWKYGFYLAH- 83 (116)
T ss_pred CCceEEeEeccCCCceeEEEEe--cceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccCcccCCcceEEEEEEEe-
Confidence 3444444433344568998887 677766565 332 44667777776554332 1222 234444431
Q ss_pred ecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 127 KDGSTRHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 127 ~~~~~R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
.++ .-.+-|++.++++...|+.+|..|.
T Consensus 84 ~~~-~~~~~f~~Ktee~K~kWm~al~~a~ 111 (116)
T cd01223 84 KQG-KTGFTFYFKTEHLRKKWLKALEMAM 111 (116)
T ss_pred cCC-CccEEEEeCCHHHHHHHHHHHHHHH
Confidence 222 2448899999999999999987653
No 176
>KOG0705|consensus
Probab=88.61 E-value=0.41 Score=47.30 Aligned_cols=38 Identities=26% Similarity=0.503 Sum_probs=32.8
Q ss_pred CceEEEEeC-CeEEEEEcCCHHHHHHHHHHHhhcccccc
Q psy9639 246 GFTFTLKTP-QRWYQFSALSAPDRDQWIQAVQTGFTFTL 283 (321)
Q Consensus 246 ~~~F~i~t~-~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l 283 (321)
.+||.|+.. +.++.|.|-+-+|++.||+||+.-|...|
T Consensus 445 de~F~IVs~tgqtWhFeAtt~EERdaWvQai~sqIlaSl 483 (749)
T KOG0705|consen 445 DECFEIVSNTGQTWHFEATTYEERDAWVQAIQSQILASL 483 (749)
T ss_pred cceEEEeccccchhhhhhcchhhHHHHHHHHHHHHHHHH
Confidence 469999965 78999999999999999999999885443
No 177
>KOG1738|consensus
Probab=88.61 E-value=0.063 Score=53.34 Aligned_cols=47 Identities=23% Similarity=0.410 Sum_probs=40.2
Q ss_pred ceEEEEEEeCCC--CCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcc
Q psy9639 180 GREGWLWKTGPK--NADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLG 226 (321)
Q Consensus 180 ~k~G~L~K~g~~--~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~ 226 (321)
..+|||++.+.. ....|++-||+|.+..|+.|.++.+..+.++|.|.
T Consensus 563 ~~qg~~~r~k~~~~~~~kW~k~~~~l~~~~l~~y~n~~~~~~e~~i~l~ 611 (638)
T KOG1738|consen 563 DRQGWLTRLKLNHLTQEKWRKIWMVLNDDPLLNYRNHRVRAAESVIKLP 611 (638)
T ss_pred hhhccchhhccchHHHHHhhhheeeecCchhhhhhhhhhhchhheeecc
Confidence 568999876543 24579999999999999999999999999999984
No 178
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=87.00 E-value=6.5 Score=31.85 Aligned_cols=77 Identities=14% Similarity=0.308 Sum_probs=50.9
Q ss_pred eeeEEEEeccCCeEEeecC-CC-----CCc----eeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHH
Q psy9639 74 HPRRFVLNEINDTIKYYVK-EK-----KEP----KATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQS 143 (321)
Q Consensus 74 k~R~fvL~~~~~~L~Yy~~-~~-----~~p----kg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e 143 (321)
+.|..-|. +..+..=+. .+ ..| |..|.++++..+ ....|.+..|.|.+. ++...|.++|.|.+.
T Consensus 30 ~eRhVFLF--E~~viF~K~~~~~~~~~~~p~Y~yK~~ikls~lglt--e~v~gd~~kFeiw~~--~~~~~yilqA~t~e~ 103 (133)
T cd01227 30 MQRHIFLH--EKAVLFCKKREENGEGEKAPSYSFKQSLKMTAVGIT--ENVKGDTKKFEIWYN--AREEVYILQAPTPEI 103 (133)
T ss_pred ceeEEEEe--cceEEEEEEeccCCCCCcceeEEEeeeEEeeccccc--ccCCCCccEEEEEeC--CCCcEEEEEcCCHHH
Confidence 35777776 555555443 21 223 678888777442 222355667877654 345789999999999
Q ss_pred HHHHHHHHHhhhh
Q psy9639 144 IMNWYHAIRNAKF 156 (321)
Q Consensus 144 ~~~W~~aLr~a~~ 156 (321)
...|+..|+..-.
T Consensus 104 K~~Wv~~I~~iL~ 116 (133)
T cd01227 104 KAAWVNEIRKVLT 116 (133)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999986643
No 179
>KOG0592|consensus
Probab=86.54 E-value=0.51 Score=46.61 Aligned_cols=85 Identities=29% Similarity=0.372 Sum_probs=60.6
Q ss_pred cceEEEEEEeCCCCCCCcceEEEEEe-CCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeE
Q psy9639 179 FGREGWLWKTGPKNADAYRKRWFTLD-YRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRW 257 (321)
Q Consensus 179 ~~k~G~L~K~g~~~~~~WkkRwfvL~-~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~ 257 (321)
+.+.|.|.|+.+.. =++|.|+|+ +..|.|+. +.....+|.|++..+ +.+.. .....|-|.||.|+
T Consensus 451 i~k~~~l~k~~~lf---~rkr~lllTn~~rll~~~-~~~~~lk~eip~~~~---~~~e~-------~n~~~~~i~TP~k~ 516 (604)
T KOG0592|consen 451 ILKEGALEKRQGLF---ARKRMLLLTNGPRLLYVD-PQNLVLKGEIPWSPD---LRVEL-------KNSSTFFIHTPNKV 516 (604)
T ss_pred HHhHHHHHhhhhhh---hceeEEEecCCCeEEEEe-cccceeccccccCcc---cceee-------ccCcceEEECCccc
Confidence 45778887775443 367999998 66777776 555578899999763 22222 23346999999999
Q ss_pred EEEEcCCHHHHHHHHHHHhhc
Q psy9639 258 YQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 258 ~~f~A~s~~e~~~Wv~aL~~a 278 (321)
|+|-- -+.....|..||.+.
T Consensus 517 ~~l~d-~~~~as~w~~ai~~~ 536 (604)
T KOG0592|consen 517 YYLED-PEQRASVWCKAIETV 536 (604)
T ss_pred eeccC-cccchhHHHHhhhhh
Confidence 99765 556778999999886
No 180
>PF15411 PH_10: Pleckstrin homology domain
Probab=85.64 E-value=5.6 Score=31.39 Aligned_cols=75 Identities=19% Similarity=0.290 Sum_probs=48.6
Q ss_pred CCcceEEEEEeCCeeEeeeCCCCC-------------------CcceeEEcccccCceEEecCCCCCCCCCCceEEEEe-
Q psy9639 194 DAYRKRWFTLDYRKLMYHEEPLSA-------------------YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT- 253 (321)
Q Consensus 194 ~~WkkRwfvL~~~~L~Yyk~~~~~-------------------~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t- 253 (321)
..|+...+-|-...|.+.+..... ..+|.|.+.++.+ |.. .+ ....+.++|.-
T Consensus 19 ~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~i~~---v~~---~s-~~g~~~L~i~w~ 91 (116)
T PF15411_consen 19 DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISNITE---VSS---SS-KPGSYSLQISWK 91 (116)
T ss_pred CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEeeee---eec---cC-CCCceEEEEEEc
Confidence 579999999999998888753211 1368888876533 322 11 13456788874
Q ss_pred --C-CeEEEEEcCCHHHHHHHHHHH
Q psy9639 254 --P-QRWYQFSALSAPDRDQWIQAV 275 (321)
Q Consensus 254 --~-~r~~~f~A~s~~e~~~Wv~aL 275 (321)
+ .-.|.|.-.++++|+.|-.+|
T Consensus 92 ~d~e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 92 GDPELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred CCCCCceEEEEeCCHHHHHHHHhhC
Confidence 2 268887777777777776654
No 181
>KOG2070|consensus
Probab=85.42 E-value=1.4 Score=42.85 Aligned_cols=75 Identities=15% Similarity=0.247 Sum_probs=51.3
Q ss_pred cceEEEEEeCCeeEeeeCCCCC---CcceeEEcccccCceEEecCCCCCCCCCCceEEEEeC--CeEEEEEcCCHHHHHH
Q psy9639 196 YRKRWFTLDYRKLMYHEEPLSA---YPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTP--QRWYQFSALSAPDRDQ 270 (321)
Q Consensus 196 WkkRwfvL~~~~L~Yyk~~~~~---~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~--~r~~~f~A~s~~e~~~ 270 (321)
=+.|||+|-.+.|.++.-..+. .-.|-+++ .|..|...+ ++....+.|+|..+ +| ....+..+.+.+.
T Consensus 325 ~~dRy~~LF~~~llflsvs~rMs~fIyegKlp~----tG~iV~klE--dte~~~nafeis~~ti~r-Iv~~c~~~~~l~~ 397 (661)
T KOG2070|consen 325 EKDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPT----TGMIVTKLE--DTENHRNAFEISGSTIER-IVVSCNNQQDLQE 397 (661)
T ss_pred hhhheeeeccceeeeeEeccccchhhhcccccc----ceeEEeehh--hhhcccccccccccchhh-eeeccCChHHHHH
Confidence 4589999999999888755432 23566777 456666533 33456678999865 45 4556777888888
Q ss_pred HHHHHhh
Q psy9639 271 WIQAVQT 277 (321)
Q Consensus 271 Wv~aL~~ 277 (321)
|+++|+.
T Consensus 398 wve~ln~ 404 (661)
T KOG2070|consen 398 WVEHLNK 404 (661)
T ss_pred HHHHhhh
Confidence 8888875
No 182
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=84.35 E-value=13 Score=30.11 Aligned_cols=94 Identities=16% Similarity=0.213 Sum_probs=39.6
Q ss_pred eeeEEEeecCCCCCceeeEEEEeccCCeEEeecC--CCC-----CceeEEeccceEEEe---------------------
Q psy9639 59 MDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK--EKK-----EPKATLRISELNVVI--------------------- 110 (321)
Q Consensus 59 ~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~--~~~-----~pkg~I~l~~~~~~~--------------------- 110 (321)
.+|=|.++|.....|-.=.+.|. |+.|..=+. ..+ ..+.-|+|.-+....
T Consensus 3 ~~G~L~Rk~~~~~~~~di~~~LF--Dh~Lll~K~k~~~k~e~ykV~r~PIPLeLL~l~~~~d~~~~~~~~~r~s~s~~~~ 80 (135)
T PF15405_consen 3 YKGDLKRKGDNSFNWVDIHVYLF--DHYLLLTKPKKVNKREQYKVYRRPIPLELLVLESMDDPPPQRSIAKRPSSSLISS 80 (135)
T ss_dssp --------------S-EEEEEEE--SSEEEEEEEEEETTEEEEEESS--EEGGG-EEEE--TTTS---------S-----
T ss_pred cccccccccccccccceeEEEee--ccEEEEEEEEecCCeEEEEEEECCcCHHHeeeecccCCCcccCcccccccCccCC
Confidence 56888888888777877777776 666654433 111 111233333321110
Q ss_pred c---------cCCCCCCceeEEEEeecC-ceEEEEEEeCChHHHHHHHHHHHhh
Q psy9639 111 A---------PSKIEHPHSLQLTFMKDG-STRHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 111 ~---------~~~~~~~~~~~i~~~~~~-~~R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
. +.......++.|+|.--| ....|-|+|+|+.++.+|++.|..+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~q 134 (135)
T PF15405_consen 81 SSSNSNSPSNPNSSDSKSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEEQ 134 (135)
T ss_dssp --SHHHH--------TSSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHHH
T ss_pred ccCCCCccceeeeccCCCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHhc
Confidence 0 001123456677665544 3466899999999999999998754
No 183
>KOG1170|consensus
Probab=84.16 E-value=0.059 Score=54.92 Aligned_cols=92 Identities=14% Similarity=0.129 Sum_probs=61.6
Q ss_pred ceEEEEEEeCCCCCCCcceEEEEEeCCe-eEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639 180 GREGWLWKTGPKNADAYRKRWFTLDYRK-LMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY 258 (321)
Q Consensus 180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~-L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~ 258 (321)
++.|...+..... ..|+.|++.+++.. +.|-+...... --.+.+.. .+|.+ .++...++.|.|+++-|+.
T Consensus 3 ~~rgl~~~~~ne~-Ea~k~r~~~~k~~~~~~vakTa~g~~-~~~~d~t~----a~~~e---Ss~~n~~~sf~vi~~~rk~ 73 (1099)
T KOG1170|consen 3 VTRGLDNDVDNER-EAWKQSILRAKDRMPEKVAKTASGPL-FALLDLTS----AHVAE---SSTNNPRPSFCVITPVRKH 73 (1099)
T ss_pred cccccccccccHH-HHHHHHHHHHHHHHHHHHHhccCCcc-HHHHhccc----ccccc---cccCCCCCCeeEecccHHh
Confidence 4556666665555 68999999999887 44444443311 11222322 12222 2233456789999999999
Q ss_pred EEEcCCHHHHHHHHHHHhhccc
Q psy9639 259 QFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 259 ~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
.++|++..+|..|+.++++-..
T Consensus 74 r~~adn~ke~e~wi~~~kt~q~ 95 (1099)
T KOG1170|consen 74 RLCADNRKEMEKWINQSKTPQH 95 (1099)
T ss_pred hhhccchhHHHHhhccccchhh
Confidence 9999999999999999998653
No 184
>KOG0517|consensus
Probab=83.93 E-value=0.052 Score=59.65 Aligned_cols=128 Identities=16% Similarity=0.297 Sum_probs=88.7
Q ss_pred ceEEEEEEeC-------CCCCCCcceEEEEEeCCeeEeeeCCCCCCc------ceeEEcccccCceEEecCCCCCCCCCC
Q psy9639 180 GREGWLWKTG-------PKNADAYRKRWFTLDYRKLMYHEEPLSAYP------KGEIFLGHCSDGYTVRLGVPPGAKDQG 246 (321)
Q Consensus 180 ~k~G~L~K~g-------~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~------~g~i~L~~~~~~~~V~~~~~~~~~~~~ 246 (321)
..+|+|+.+- ...++.|..-||++..+.|.+|++...... .|..+|.-. .+.|.... ....++
T Consensus 2300 ~~eG~L~Rk~~~~A~e~k~~nRsw~~vy~~i~e~el~fykD~k~~~a~ve~~~r~e~~lel~--~a~i~~a~--dy~kkk 2375 (2473)
T KOG0517|consen 2300 QLEGFLYRKHLLGALEIKASNRSWDNVYCRIREKELGFYKDAKKDLASVELLVRGEPPLELD--MAAIEVAS--DYHKKK 2375 (2473)
T ss_pred HHHhHHHHHHHHhhhhhhhhcccHHHHHHHHHhccchhhcccCcccccchhhccCCcchhcc--hhHHHHHH--HHHHHh
Confidence 4577775321 112478999999999999999998754322 233333221 11121111 112356
Q ss_pred ceEEEEe-CCeEEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHHHHHHHhhcCCCCCCC
Q psy9639 247 FTFTLKT-PQRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDTPLTPQD 319 (321)
Q Consensus 247 ~~F~i~t-~~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~~~l~~~~ 319 (321)
+.|.+.. ++.-|.|+|.++++|+.|+.++...+...+. + .+..++...|..+..+-.++.++|..
T Consensus 2376 ~v~~l~~~~gae~llq~k~ee~m~sWL~~~a~~~~~~lk-------~-~~~~~e~~~~a~~~~a~~~~t~pp~~ 2441 (2473)
T KOG0517|consen 2376 HVFLLQLPPGAEHLLQAKDEEEMESWLRALAVKRAEALK-------L-SDDVKELEVWANAVRASMSQTLPPSS 2441 (2473)
T ss_pred HhhhhcCCchHHHHHhhccHHHHHHHHHHHHHHHHHHhh-------h-hhhHHHhhhhHHHHHHHhhcCCCCCC
Confidence 8898885 5799999999999999999999998876552 2 36678888999999999999888854
No 185
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=83.40 E-value=10 Score=29.54 Aligned_cols=32 Identities=31% Similarity=0.472 Sum_probs=19.6
Q ss_pred CCceEEEEeCCeEEEEEcCCHHHHHHHHHHHh
Q psy9639 245 QGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQ 276 (321)
Q Consensus 245 ~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~ 276 (321)
..+.|.|.|..+...|.++|..+.+.|+++|+
T Consensus 69 ~~~yfgL~T~~G~vEfec~~~~~~k~W~~gI~ 100 (110)
T PF08458_consen 69 ERRYFGLKTAQGVVEFECDSQREYKRWVQGIQ 100 (110)
T ss_pred eEEEEEEEecCcEEEEEeCChhhHHHHHHHHH
Confidence 34778888888888844444444444444443
No 186
>KOG3523|consensus
Probab=82.08 E-value=4.4 Score=40.61 Aligned_cols=82 Identities=20% Similarity=0.274 Sum_probs=46.2
Q ss_pred CcceEEEEEeCCeeEeeeCCCC-------CCcceeEEcccccCceEEecCCCCCCCCCCceEEEEe--C----CeEEEEE
Q psy9639 195 AYRKRWFTLDYRKLMYHEEPLS-------AYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT--P----QRWYQFS 261 (321)
Q Consensus 195 ~WkkRwfvL~~~~L~Yyk~~~~-------~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t--~----~r~~~f~ 261 (321)
..+.-|+.|-++.|..-+.... ..+.+.|.+..+....... ..+......+|.|.+.- + .-.|.|+
T Consensus 498 ~~~~vylfLFnD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp-~~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~ 576 (695)
T KOG3523|consen 498 LSKTVYLFLFNDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLP-GGANSLSSRPHLFLLTLLSNHQGRQTELLLS 576 (695)
T ss_pred ccceeeeeeecceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCC-CCCcccccccceEEEehhhccCCCceeeeec
Confidence 4556688888888777664422 2234444443221000000 00001112346777752 2 2689999
Q ss_pred cCCHHHHHHHHHHHhh
Q psy9639 262 ALSAPDRDQWIQAVQT 277 (321)
Q Consensus 262 A~s~~e~~~Wv~aL~~ 277 (321)
|+|..|+++||.||.-
T Consensus 577 a~s~Sd~~RWi~Al~p 592 (695)
T KOG3523|consen 577 AESQSDRQRWISALRP 592 (695)
T ss_pred CCchHHHHHHHHhcCC
Confidence 9999999999999984
No 187
>KOG4807|consensus
Probab=80.35 E-value=0.028 Score=52.64 Aligned_cols=78 Identities=19% Similarity=0.340 Sum_probs=58.5
Q ss_pred CCCceeeEEEEeccCCeEEeecC----CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHH
Q psy9639 70 SGKYHPRRFVLNEINDTIKYYVK----EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIM 145 (321)
Q Consensus 70 ~~~wk~R~fvL~~~~~~L~Yy~~----~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~ 145 (321)
...|++-||||. +..|.||.+ ...+..|.|+|.+|..+.. ......+||+| .+....|-+.+-+.--..
T Consensus 32 t~~~~k~~~~~~--~~~~~~~~d~~A~~~~~L~~~~~LR~C~~v~e-~a~q~nY~~~i----~~~~~~~tL~~~~s~Ir~ 104 (593)
T KOG4807|consen 32 TSQWKKHWFVLT--DSSLKYYRDSTAEEADELDGEIDLRSCTDVTE-YAVQRNYGFQI----HTKDAVYTLSAMTSGIRR 104 (593)
T ss_pred hHHHHHHHHHHh--HHHHHHHHHHHHHhcccCCccccHHHHHHHHH-HHHHhccceee----cccchhhhhHHHHHHHHH
Confidence 346999999999 899999987 4567789999998854332 12345677766 355566777888888889
Q ss_pred HHHHHHHhh
Q psy9639 146 NWYHAIRNA 154 (321)
Q Consensus 146 ~W~~aLr~a 154 (321)
.|+.+++..
T Consensus 105 ~~~~A~~kT 113 (593)
T KOG4807|consen 105 NWIEALRKT 113 (593)
T ss_pred HHHHHHHhc
Confidence 999999854
No 188
>KOG4236|consensus
Probab=77.37 E-value=5.5 Score=39.73 Aligned_cols=92 Identities=16% Similarity=0.310 Sum_probs=63.0
Q ss_pred ceeeEEEeecCCCCCceeeEEEEeccCCeEEeecC-CCCCceeEEeccceEEEeccC------CCCCCceeEEEEeecCc
Q psy9639 58 HMDGFLMKRGKESGKYHPRRFVLNEINDTIKYYVK-EKKEPKATLRISELNVVIAPS------KIEHPHSLQLTFMKDGS 130 (321)
Q Consensus 58 ~~~G~L~K~g~~~~~wk~R~fvL~~~~~~L~Yy~~-~~~~pkg~I~l~~~~~~~~~~------~~~~~~~~~i~~~~~~~ 130 (321)
.+|||..--.....--||-|..|. ..++..|.+ .....=..|+|+++..+..+. ....||+|.|. +.
T Consensus 414 ~kEGWmvHyt~~d~lRkrHYWrld--sk~itlfqn~s~~ryYkeIPLsEIl~v~~~~~~~~vp~~~~phcFEI~----T~ 487 (888)
T KOG4236|consen 414 LKEGWMVHYTSKDNLRKRHYWRLD--SKCITLFQNESTNRYYKEIPLSEILSVSSNNGFSLVPAGTNPHCFEIR----TA 487 (888)
T ss_pred hhcceEEEEechhhhhhhhhheec--cceeEeeecCCCceeEEeecHHHhheeeccCCcccCCCCCCCceEEEE----ee
Confidence 678998876655555677788888 889999988 666666789999985543211 22467887764 33
Q ss_pred eEEEEEEeCC------------hHHHHHHHHHHHhhhh
Q psy9639 131 TRHIYVYHEE------------SQSIMNWYHAIRNAKF 156 (321)
Q Consensus 131 ~R~~~l~a~s------------~~e~~~W~~aLr~a~~ 156 (321)
+ +.|+..++ .+....|-.+|+++-+
T Consensus 488 ~-~vyfVge~p~~~~~~~~g~g~d~a~~w~~ai~~alM 524 (888)
T KOG4236|consen 488 T-TVYFVGENPSSTPGGESGVGLDAAQGWETAIQQALM 524 (888)
T ss_pred e-EEEEecCCCCCCccccccccchhhccCchhhhhccc
Confidence 3 45666655 3447889999987754
No 189
>KOG3551|consensus
Probab=71.91 E-value=5.3 Score=37.90 Aligned_cols=95 Identities=16% Similarity=0.280 Sum_probs=64.2
Q ss_pred ceeeEEEeecCCC--CCceeeEEEEeccCCeEEeecC-CC-----CCceeEEeccceEEEec-cCCCCCCceeEEEEeec
Q psy9639 58 HMDGFLMKRGKES--GKYHPRRFVLNEINDTIKYYVK-EK-----KEPKATLRISELNVVIA-PSKIEHPHSLQLTFMKD 128 (321)
Q Consensus 58 ~~~G~L~K~g~~~--~~wk~R~fvL~~~~~~L~Yy~~-~~-----~~pkg~I~l~~~~~~~~-~~~~~~~~~~~i~~~~~ 128 (321)
..-|||-+|-+.+ .+|+.-+.+|. +..|..|.+ .- ..|..+-+|.....+-. +.+-....|..+.|...
T Consensus 293 kHiGWLaeq~~~~G~~~w~P~l~~lT--ekelliYes~P~~keaws~P~~~ypLvaTRLvhsg~~~~s~~~g~~lsFa~R 370 (506)
T KOG3551|consen 293 KHIGWLAEQVSGGGISQWKPKLMALT--EKELLIYESMPWTKEAWSRPRHTYPLVATRLVHSGSGKGSVIKGLTLSFATR 370 (506)
T ss_pred hhhhhHHhhccCCChhhhhhheeeec--hhhhhhhhcChhhHHHhcChhhhhhhhhhhheecCCCCCCCcCCceEEEEEe
Confidence 4569999876554 57999999999 777888887 21 35666666554322211 22222345666777665
Q ss_pred Cce----EEEEEEeCChHHHHHHHHHHHhh
Q psy9639 129 GST----RHIYVYHEESQSIMNWYHAIRNA 154 (321)
Q Consensus 129 ~~~----R~~~l~a~s~~e~~~W~~aLr~a 154 (321)
+.+ +++.|..++..|+..|..+|.+-
T Consensus 371 tGTrqGV~thlfrvEThrdLa~WtRslVqG 400 (506)
T KOG3551|consen 371 TGTRQGVETHLFRVETHRELAAWTRSLVQG 400 (506)
T ss_pred cccccceEEEEEEeccHHHHHHHHHHHHHH
Confidence 443 56889999999999999888543
No 190
>PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function.
Probab=68.21 E-value=6.9 Score=30.50 Aligned_cols=33 Identities=33% Similarity=0.560 Sum_probs=29.9
Q ss_pred cccccCceEEEEecCCHHHHHHHHHHHHHhhcC
Q psy9639 281 FTLKTPQRWYQFSALSAPDRDQWIQAVQTVLDT 313 (321)
Q Consensus 281 ~~l~~~~~~~~l~a~s~~e~~~Wi~al~~~i~~ 313 (321)
|.|.|.+....|-|+|..+.+.|.+.|+..+..
T Consensus 73 fgL~T~~G~vEfec~~~~~~k~W~~gI~~mL~~ 105 (110)
T PF08458_consen 73 FGLKTAQGVVEFECDSQREYKRWVQGIQHMLSQ 105 (110)
T ss_pred EEEEecCcEEEEEeCChhhHHHHHHHHHHHHHH
Confidence 578899999999999999999999999988754
No 191
>KOG4047|consensus
Probab=62.00 E-value=4.5 Score=39.14 Aligned_cols=97 Identities=15% Similarity=0.122 Sum_probs=52.5
Q ss_pred CCcceEEEEEEeCCCC-CCCcceEEEEEeCCe------eEeeeCCCCCC---c----ceeEEcccccCceEEecCCCCCC
Q psy9639 177 RDFGREGWLWKTGPKN-ADAYRKRWFTLDYRK------LMYHEEPLSAY---P----KGEIFLGHCSDGYTVRLGVPPGA 242 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~~-~~~WkkRwfvL~~~~------L~Yyk~~~~~~---~----~g~i~L~~~~~~~~V~~~~~~~~ 242 (321)
...+|.|++.-+..+. .+.|.++|++|..+. |..|.+..... + ...+-|+.+ ++|....-...
T Consensus 6 ~~~~k~g~~~~~~~r~~~k~~~~~~~~L~~gs~~g~aRle~~~~~g~~~~~~~~~~~rR~~~ls~~---~S~e~~~~~~~ 82 (429)
T KOG4047|consen 6 SCLVKDGVPDNHRNKFKVKNVRDDGAELGSGSMELTARLEILESRGRESVRWPYRCLRRYGYLSNL---FSFESGRRCQT 82 (429)
T ss_pred CcccccCccchhhhhhccccccccceeeeccccccchhhhhhhccCCcccccchhcceeeEeeccc---eeeeccccccc
Confidence 3567888887665544 358999999998532 33333221111 1 234445433 55554321111
Q ss_pred CCCCceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhc
Q psy9639 243 KDQGFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTG 278 (321)
Q Consensus 243 ~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~a 278 (321)
....+.|-..+... +|-+.++-+...|+++|..-
T Consensus 83 ~~~i~~~f~~~a~e--~~~~~q~l~~~~w~~~i~~~ 116 (429)
T KOG4047|consen 83 GPGITAFFCDRAEE--LFNMLQDLMQANWINAIEEP 116 (429)
T ss_pred CCCceEEEecchHH--HHHHHHHHHhhhhhhhhhhc
Confidence 22233443333333 66677777777888888773
No 192
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=61.22 E-value=2.4 Score=39.90 Aligned_cols=28 Identities=32% Similarity=0.443 Sum_probs=20.5
Q ss_pred CCcceEEEEEEeCC-----CCCCCcceEEEEEe
Q psy9639 177 RDFGREGWLWKTGP-----KNADAYRKRWFTLD 204 (321)
Q Consensus 177 ~~~~k~G~L~K~g~-----~~~~~WkkRwfvL~ 204 (321)
..++++|+|.|+.. ....+||||||.|+
T Consensus 301 ~~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 301 SVTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred CchhhhhHhhhccccCCCCcccccccceeeecC
Confidence 45689999998753 22236999999874
No 193
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=60.49 E-value=2.1 Score=39.82 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=22.3
Q ss_pred cccccceeeEEEeecCCC-----CCceeeEEEEe
Q psy9639 53 TYITGHMDGFLMKRGKES-----GKYHPRRFVLN 81 (321)
Q Consensus 53 ~~~~~~~~G~L~K~g~~~-----~~wk~R~fvL~ 81 (321)
|.+...++|+|.||.... ++||+|||.|.
T Consensus 279 ~~~~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~ 312 (313)
T cd05394 279 SEPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLT 312 (313)
T ss_pred CCchhhHHHHHHhhccCCCccccccchhheeecC
Confidence 344568999999987432 47999999996
No 194
>cd05394 RasGAP_RASA2 RASA2 (or GAP1(m)) is a member of the GAP1 family of Ras GTPase-activating proteins that includes GAP1_IP4BP (or RASA3), CAPRI, and RASAL. In vitro, RASA2 has been shown to bind inositol 1,3,4,5-tetrakisphosphate (IP4), the water soluble inositol head group of the lipid second messenger phosphatidylinositol 3,4,5-trisphosphate (PIP3). In vivo studies also demonstrated that RASA2 binds PIP3, and it is recruited to the plasma membrane following agonist stimulation of PI 3-kinase. Furthermore, the membrane translocation is a consequence of the ability of its pleckstrin homology (PH) domain to bind PIP3.
Probab=60.47 E-value=1.8 Score=40.29 Aligned_cols=30 Identities=27% Similarity=0.534 Sum_probs=22.1
Q ss_pred CCCcceEEEEEEeCCC----CCCCcceEEEEEeC
Q psy9639 176 TRDFGREGWLWKTGPK----NADAYRKRWFTLDY 205 (321)
Q Consensus 176 ~~~~~k~G~L~K~g~~----~~~~WkkRwfvL~~ 205 (321)
...++++|+|.|+... +.+.||||||.|+.
T Consensus 280 ~~~~~~e~~~~~r~~~~~~~~~~~~kkr~~~l~~ 313 (313)
T cd05394 280 EPVHLKEGEMYKRAQGRTRIGKKNFKKRWFCLTS 313 (313)
T ss_pred CchhhHHHHHHhhccCCCccccccchhheeecCC
Confidence 3456899999986532 23579999999863
No 195
>KOG1264|consensus
Probab=58.87 E-value=15 Score=38.29 Aligned_cols=36 Identities=19% Similarity=0.348 Sum_probs=29.1
Q ss_pred CCCceEEEEe---CCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 244 DQGFTFTLKT---PQRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 244 ~~~~~F~i~t---~~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
.+.+.|.|.. ..-.|.|.|++.+++..|+++|+.+.
T Consensus 872 ~~~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t 910 (1267)
T KOG1264|consen 872 QKSFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREIT 910 (1267)
T ss_pred CcceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHH
Confidence 4457777763 35789999999999999999999864
No 196
>KOG3523|consensus
Probab=58.85 E-value=13 Score=37.29 Aligned_cols=94 Identities=22% Similarity=0.350 Sum_probs=55.7
Q ss_pred cceeeEEEeecCCC--------------CCceeeEEEEeccCCeEEeecC--C------CCCceeEEeccceEEEe--c-
Q psy9639 57 GHMDGFLMKRGKES--------------GKYHPRRFVLNEINDTIKYYVK--E------KKEPKATLRISELNVVI--A- 111 (321)
Q Consensus 57 ~~~~G~L~K~g~~~--------------~~wk~R~fvL~~~~~~L~Yy~~--~------~~~pkg~I~l~~~~~~~--~- 111 (321)
.+-+-||.|+|.-. ...+.-|+.|. ++.|..-+. + |--|.+.|.+..+.... .
T Consensus 469 iS~sRwLvk~GELt~l~~~~~s~~l~~k~~~~~vylfLF--nD~Llitk~k~~~~f~V~Dya~r~~l~ve~~e~~~~lp~ 546 (695)
T KOG3523|consen 469 VSQSRWLVKRGELTQLVERRASPLLFSKRLSKTVYLFLF--NDLLLITKKKSEGSFQVFDYAPRSLLQVEKCEPELKLPG 546 (695)
T ss_pred ccchhhhhhccccceeecccccchhhcccccceeeeeee--cceeeEeeecCCCceEEeeccchhhhhhhhcCcccCCCC
Confidence 44467788877541 12444566776 666665544 2 22344555555553211 1
Q ss_pred --cCCCCCCceeEEEEeec--CceEEEEEEeCChHHHHHHHHHHH
Q psy9639 112 --PSKIEHPHSLQLTFMKD--GSTRHIYVYHEESQSIMNWYHAIR 152 (321)
Q Consensus 112 --~~~~~~~~~~~i~~~~~--~~~R~~~l~a~s~~e~~~W~~aLr 152 (321)
+...+.+|-|.++...+ +.+-.+.|.|+|..|+..|+.|++
T Consensus 547 ~~~~~~~~~hlF~ltLl~N~~~~~~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 547 GANSLSSRPHLFLLTLLSNHQGRQTELLLSAESQSDRQRWISALR 591 (695)
T ss_pred CCcccccccceEEEehhhccCCCceeeeecCCchHHHHHHHHhcC
Confidence 11123345677765543 445568899999999999999997
No 197
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=57.70 E-value=2.7 Score=39.05 Aligned_cols=29 Identities=31% Similarity=0.637 Sum_probs=20.9
Q ss_pred CCcceEEEEEEeC--CC--CCCCcceEEEEEeC
Q psy9639 177 RDFGREGWLWKTG--PK--NADAYRKRWFTLDY 205 (321)
Q Consensus 177 ~~~~k~G~L~K~g--~~--~~~~WkkRwfvL~~ 205 (321)
..++++|.|.|+. .. +.+.||||||.|+.
T Consensus 278 ~~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt~ 310 (310)
T cd05134 278 PILLKEGFMIKRAQGRKRFGMKNFKKRWFRLTN 310 (310)
T ss_pred cchhhhhhHHHhcccCCcccccchhheeeecCC
Confidence 3568999999843 22 23579999999863
No 198
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=56.52 E-value=3.1 Score=38.81 Aligned_cols=26 Identities=27% Similarity=0.528 Sum_probs=20.2
Q ss_pred ccceeeEEEeecCC-----CCCceeeEEEEe
Q psy9639 56 TGHMDGFLMKRGKE-----SGKYHPRRFVLN 81 (321)
Q Consensus 56 ~~~~~G~L~K~g~~-----~~~wk~R~fvL~ 81 (321)
...|+|++.|+.+. .++||||||+|.
T Consensus 285 ~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 285 VVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred hhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 56899999987633 247999999984
No 199
>KOG3727|consensus
Probab=54.11 E-value=2.5 Score=41.89 Aligned_cols=80 Identities=14% Similarity=0.117 Sum_probs=51.3
Q ss_pred CCcceEEEEEeC----CeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCC-CCCceEEEEeC-CeEEEEEcCCHHH
Q psy9639 194 DAYRKRWFTLDY----RKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAK-DQGFTFTLKTP-QRWYQFSALSAPD 267 (321)
Q Consensus 194 ~~WkkRwfvL~~----~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~-~~~~~F~i~t~-~r~~~f~A~s~~e 267 (321)
|..+|-||...+ ..+.||++. ..|.+.|.+ .||.|.++++.+.. ...++.....+ .--+++++++++.
T Consensus 373 Kg~kr~f~t~~dl~~~~~~s~~~s~--~ap~~~i~l----~gcev~~dV~~~~~k~~i~l~~~~~~~msEi~LRCd~E~Q 446 (664)
T KOG3727|consen 373 KGYKRYFFTFRDLHLSLYKSSEDSR--GAPAISINL----KGCEVTPDVNLSQQKYAIKLLVPTAEGMSEIWLRCDNEQQ 446 (664)
T ss_pred hhhhhHHHHHHHHHHHHHhhHhhhc--CCCCCchhh----cCcccCCccccccccceEEEEeecCCccceeEEecCCHHH
Confidence 566666666554 445555555 457778888 45666665544321 12223332333 3788999999999
Q ss_pred HHHHHHHHhhcc
Q psy9639 268 RDQWIQAVQTGF 279 (321)
Q Consensus 268 ~~~Wv~aL~~ai 279 (321)
--+||.|.+-|.
T Consensus 447 YA~WMAaCrLAS 458 (664)
T KOG3727|consen 447 YARWMAACRLAS 458 (664)
T ss_pred HHHHHHHhhHhh
Confidence 999999998875
No 200
>KOG0702|consensus
Probab=53.74 E-value=12 Score=36.61 Aligned_cols=48 Identities=25% Similarity=0.365 Sum_probs=36.1
Q ss_pred ccccchHHHHhhhccCCC-CCCCCCCCCChHHHHHHHHHhhhhcccccCC
Q psy9639 2 KQIGNNVSKLKYEMRVPA-SYKVPTSSCPQVLLKEWIRSKYEREEFRHPE 50 (321)
Q Consensus 2 ~~~gn~~~~~~~e~~~p~-~~~~p~~~~~~~~~e~~ir~ky~~~~f~~~~ 50 (321)
...||....++|..-.-. .--.|...++..+|| |||.|||.+.|..+.
T Consensus 82 QshgNq~~k~i~fkl~D~q~S~vPD~rn~~~~ke-f~q~~y~~kr~~v~~ 130 (524)
T KOG0702|consen 82 QSHGNQVCKEIWFKLFDFQRSNVPDSRNPQKVKE-FQQEKYVKKRYYVPK 130 (524)
T ss_pred hhcchhhhhhhhhcchhhhhccCCCcccchhhHH-HHhhhhccceeecCc
Confidence 356999999999875322 223466678888887 999999999987654
No 201
>cd05128 RasGAP_GAP1_like The GAP1 family of Ras GTPase-activating proteins includes GAP1(m) (or RASA2), GAP1_IP4BP (or RASA3), Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), and Ras GTPase activating-like proteins (RASAL) or RASAL1. The members are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin homology domain that is associated with a Bruton's tyrosine kinase motif. While this domain structure is conserved, a small change in the function of each individual domain and the interaction between domains has a marked effect on the regulation of each protein.
Probab=53.56 E-value=3.3 Score=38.65 Aligned_cols=28 Identities=25% Similarity=0.503 Sum_probs=20.9
Q ss_pred CCcceEEEEEEeCCC----CCCCcceEEEEEe
Q psy9639 177 RDFGREGWLWKTGPK----NADAYRKRWFTLD 204 (321)
Q Consensus 177 ~~~~k~G~L~K~g~~----~~~~WkkRwfvL~ 204 (321)
..++|+|+|.|+... +.+.||||||.|+
T Consensus 284 ~~~~k~g~~~~~~~~~~~~~~~~~k~r~~~lt 315 (315)
T cd05128 284 PVVLKEGFMIKRAQGRGRLGRKNFKKRYFRLT 315 (315)
T ss_pred chhhhhhhhHhhcccCCCccccchhheeeecC
Confidence 467899999876422 2358999999984
No 202
>KOG4407|consensus
Probab=53.47 E-value=0.89 Score=49.04 Aligned_cols=108 Identities=17% Similarity=0.190 Sum_probs=68.9
Q ss_pred hhhhhhCCCcceEEEEEE------eC---CCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEccc----------ccC
Q psy9639 170 ELVKLLTRDFGREGWLWK------TG---PKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGH----------CSD 230 (321)
Q Consensus 170 ~l~~~~~~~~~k~G~L~K------~g---~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~----------~~~ 230 (321)
|+...+-.+..++|||+- +| +...+.|+.-|..|.++.|+.+++.....+.-.-.+++ +..
T Consensus 914 D~s~e~Fsd~~megWly~~q~~SkkGk~tGssLr~wk~~y~~l~ghsl~L~ss~re~~~~~aas~as~~~st~tts~c~n 993 (1973)
T KOG4407|consen 914 DHSIELFSDSEMEGWLYVLQSSSKKGKATGSSLREWKLSYTGLHGHSLVLNSSAREHNSQSAASLASSSCSTATTSECLN 993 (1973)
T ss_pred hhhhhhhhhhhhhcceeeeeecccCCcccCcchhhhhhHHHHhccccceecccccccCcchhhhhcccccccccCccccc
Confidence 444445567789999983 22 11236799999999999999998875522211111111 001
Q ss_pred ceEEecCCCCCCCCCCceEEEEeCC-eEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 231 GYTVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 231 ~~~V~~~~~~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|-+.. .-+...+++.|++.+.+ -.+.|+|++.++|-.|++..+...
T Consensus 994 scltdI--~ysetkrn~vfRLTt~d~ce~lfqaeDrddmlgG~~ttq~St 1041 (1973)
T KOG4407|consen 994 SCLTDI--QYSETKRNQVFRLTTNDLCEGLFQAEDRDDMLGGLSTTQSST 1041 (1973)
T ss_pred cchhhh--hhhhhhhhhHHHhHHHHHHhHhhccCccccccchhhhhhhcc
Confidence 222211 11222456788998876 778999999999999999998743
No 203
>cd05134 RasGAP_RASA3 RASA3 (or GAP1_IP4BP) is a member of the GAP1 family and has been shown to specifically bind 1,3,4,5-tetrakisphosphate (IP4). Thus, RASA3 may function as an IP4 receptor. The members of GAP1 family are characterized by a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. Purified RASA3 stimulates GAP activity on Ras with about a five-fold lower potency than p120RasGAP, but shows no GAP-stimulating activity at all against Rac or Rab3A.
Probab=52.67 E-value=3.9 Score=38.01 Aligned_cols=26 Identities=27% Similarity=0.493 Sum_probs=20.0
Q ss_pred ccceeeEEEeecCC-----CCCceeeEEEEe
Q psy9639 56 TGHMDGFLMKRGKE-----SGKYHPRRFVLN 81 (321)
Q Consensus 56 ~~~~~G~L~K~g~~-----~~~wk~R~fvL~ 81 (321)
...++|++.||... .++||||||+|.
T Consensus 279 ~~~~~~~~~~r~~~~~~~~~~~~k~r~~~lt 309 (310)
T cd05134 279 ILLKEGFMIKRAQGRKRFGMKNFKKRWFRLT 309 (310)
T ss_pred chhhhhhHHHhcccCCcccccchhheeeecC
Confidence 56899999985432 246999999996
No 204
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=49.05 E-value=81 Score=24.05 Aligned_cols=50 Identities=18% Similarity=0.228 Sum_probs=39.0
Q ss_pred EEcCCHHHHHHHHHHHhhccc---cccccCceEEEEecCCHHHHHHHHHHHHH
Q psy9639 260 FSALSAPDRDQWIQAVQTGFT---FTLKTPQRWYQFSALSAPDRDQWIQAVQT 309 (321)
Q Consensus 260 f~A~s~~e~~~Wv~aL~~ai~---~~l~~~~~~~~l~a~s~~e~~~Wi~al~~ 309 (321)
|.-.|..|.+.+|+.+++.-. -.|+..-..++++|++++..+.-.++|++
T Consensus 41 L~i~sr~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~ 93 (98)
T PF02829_consen 41 LNISSRRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKK 93 (98)
T ss_dssp EEE-SHHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHH
Confidence 556789999999999998753 44455566778999999999999988875
No 205
>cd05135 RasGAP_RASAL Ras GTPase activating-like protein (RASAL) or RASAL1 is a member of the GAP1 family, and a Ca2+ sensor responding in-phase to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. It contains a conserved domain structure comprising N-terminal tandem C2 domains, a highly conserved central RasGAP domain, and a C-terminal pleckstrin-homology domain that is associated with a Bruton's tyrosine kinase motif. RASAL, like Ca2+ -promoted Ras inactivator (CAPRI, or RASAL4), is a cytosolic protein that undergoes a rapid translocation to the plasma membrane in response to receptor-mediated elevation in the concentration of intracellular free Ca2+, a translocation that activates its ability to function as a RasGAP. However, unlike RASAL4, RASAL undergoes an oscillatory translocation to the plasma membrane that occurs in synchrony with repetitive Ca2+ spikes.
Probab=44.03 E-value=6.8 Score=36.87 Aligned_cols=26 Identities=31% Similarity=0.444 Sum_probs=19.4
Q ss_pred ccceeeEEEeecCC------CCCceeeEEEEe
Q psy9639 56 TGHMDGFLMKRGKE------SGKYHPRRFVLN 81 (321)
Q Consensus 56 ~~~~~G~L~K~g~~------~~~wk~R~fvL~ 81 (321)
...++|++.||... ...||+|||.|.
T Consensus 302 ~~~~eg~~~~r~~~~~~~~~~~~fkk~~f~l~ 333 (333)
T cd05135 302 VTVKEGYLHKRKTEGPQLLTRFAFKKRYFWLS 333 (333)
T ss_pred chhhhhHhhhccccCCCCcccccccceeeecC
Confidence 45789999997632 125999999984
No 206
>KOG2070|consensus
Probab=43.46 E-value=32 Score=33.88 Aligned_cols=74 Identities=16% Similarity=0.270 Sum_probs=45.7
Q ss_pred eeeEEEEeccCCeEEeecC----CCCCceeEEeccceEEEeccCCCCCCceeEEEEeecCce-EEEEEEeCChHHHHHHH
Q psy9639 74 HPRRFVLNEINDTIKYYVK----EKKEPKATLRISELNVVIAPSKIEHPHSLQLTFMKDGST-RHIYVYHEESQSIMNWY 148 (321)
Q Consensus 74 k~R~fvL~~~~~~L~Yy~~----~~~~pkg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-R~~~l~a~s~~e~~~W~ 148 (321)
+.|||+|. .+.|.++.- ..---.|-+++++..+.--.+..++.+.|.| .+++ -.+...+..+.++.+|+
T Consensus 326 ~dRy~~LF--~~~llflsvs~rMs~fIyegKlp~tG~iV~klEdte~~~nafei----s~~ti~rIv~~c~~~~~l~~wv 399 (661)
T KOG2070|consen 326 KDRYLLLF--PNVLLFLSVSPRMSGFIYEGKLPTTGMIVTKLEDTENHRNAFEI----SGSTIERIVVSCNNQQDLQEWV 399 (661)
T ss_pred hhheeeec--cceeeeeEeccccchhhhccccccceeEEeehhhhhcccccccc----cccchhheeeccCChHHHHHHH
Confidence 48999999 778877754 2223346677777644322222344455443 2222 22456778899999999
Q ss_pred HHHHh
Q psy9639 149 HAIRN 153 (321)
Q Consensus 149 ~aLr~ 153 (321)
.++..
T Consensus 400 e~ln~ 404 (661)
T KOG2070|consen 400 EHLNK 404 (661)
T ss_pred HHhhh
Confidence 99874
No 207
>KOG4471|consensus
Probab=43.39 E-value=69 Score=32.47 Aligned_cols=76 Identities=11% Similarity=0.162 Sum_probs=49.5
Q ss_pred EEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCC-eEEEEEcCCHHHHH-HHHHHHhhc
Q psy9639 201 FTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQ-RWYQFSALSAPDRD-QWIQAVQTG 278 (321)
Q Consensus 201 fvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~-r~~~f~A~s~~e~~-~Wv~aL~~a 278 (321)
..|++-+|++-..+.+..+.+.++|+-+.. |+...+...+...+.++|...+ |+..+.-..++..+ .|++.|+.+
T Consensus 59 l~lsNyRl~fks~~t~~~~~~~VPLg~Ie~---vek~~~~~~g~ns~~L~i~CKDmr~lR~~fk~~~q~r~~~~e~L~~~ 135 (717)
T KOG4471|consen 59 LALSNYRLYFKSKETDPPFVLDVPLGVIER---VEKRGGATSGENSFGLEITCKDMRNLRCAFKQEEQCRRDWFERLNRA 135 (717)
T ss_pred EEeeeeEEEEEeccCCCceeEeechhhhhh---hhhcCccccCCcceeEEEEeccccceeeecCcccccHHHHHHHHHHh
Confidence 455666665555566666788888876643 3332222222334666676664 88888877777766 999999998
Q ss_pred c
Q psy9639 279 F 279 (321)
Q Consensus 279 i 279 (321)
+
T Consensus 136 ~ 136 (717)
T KOG4471|consen 136 A 136 (717)
T ss_pred c
Confidence 7
No 208
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=42.79 E-value=9.5 Score=22.44 Aligned_cols=19 Identities=11% Similarity=0.643 Sum_probs=13.9
Q ss_pred HHHHHHHHHhhcCCCCCCC
Q psy9639 301 DQWIQAVQTVLDTPLTPQD 319 (321)
Q Consensus 301 ~~Wi~al~~~i~~~l~~~~ 319 (321)
.+|++-|+.|....||..|
T Consensus 3 ~EW~~Li~eA~~~Gls~ee 21 (30)
T PF08671_consen 3 EEWVELIKEAKESGLSKEE 21 (30)
T ss_dssp HHHHHHHHHHHHTT--HHH
T ss_pred HHHHHHHHHHHHcCCCHHH
Confidence 5799999999988888654
No 209
>KOG1264|consensus
Probab=41.53 E-value=36 Score=35.72 Aligned_cols=35 Identities=26% Similarity=0.565 Sum_probs=31.1
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeC
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEE 213 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~ 213 (321)
+.+|+|.|+-+.+.. +.|-+.||+|.+..|+|-..
T Consensus 474 nsvk~GiLy~kd~vd-heWt~h~fvlt~~kl~ys~e 508 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVD-HEWTRHYFVLTDAKLSYSDE 508 (1267)
T ss_pred hhhhcceEEEecCCC-CceeeeEEEEecceeEeehh
Confidence 357999999999988 89999999999999988753
No 210
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase
Probab=41.26 E-value=1.1e+02 Score=30.41 Aligned_cols=56 Identities=21% Similarity=0.401 Sum_probs=39.7
Q ss_pred CeEEEEEcCCHHHHHHHHHHHhhccccccccCceEEEEec---CCHHHHHHHHHHHHHhh
Q psy9639 255 QRWYQFSALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSA---LSAPDRDQWIQAVQTVL 311 (321)
Q Consensus 255 ~r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a---~s~~e~~~Wi~al~~~i 311 (321)
.+.|.|.+.|++..+.|+++|++.+. .+..|.+.+.+.- -.....+.|.+.++..+
T Consensus 81 ~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~kr~lvIvNP~SGkg~a~k~~~~~v~~~L 139 (481)
T PLN02958 81 RKDFVFEPLSDESRRLWCQKLRDYLD-SLGRPKRLLVFVNPFGGKKSASKIFFDVVKPLL 139 (481)
T ss_pred eeeEEEeCCCHHHHHHHHHHHHHHHh-hccCCcEEEEEEcCCCCCcchhHHHHHHHHHHH
Confidence 37899999999999999999999775 2356777665533 34444566766555443
No 211
>PF06017 Myosin_TH1: Myosin tail; InterPro: IPR010926 These proteins share a region of sequence similarity with the tail of myosin (for example O00159 from SWISSPROT). Myosins act as molecular motors. ; GO: 0003774 motor activity, 0016459 myosin complex
Probab=39.63 E-value=2.1e+02 Score=24.49 Aligned_cols=87 Identities=11% Similarity=0.025 Sum_probs=58.5
Q ss_pred CcceEEEEEEeCCCCCCCcceEEEEEeCCeeEeee-----CCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEE
Q psy9639 178 DFGREGWLWKTGPKNADAYRKRWFTLDYRKLMYHE-----EPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLK 252 (321)
Q Consensus 178 ~~~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk-----~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~ 252 (321)
.++-+....|-...+ .-.+|.++|++..+|-.. ++.....+..|+|..+ .+.+|+.. ...-|.|+
T Consensus 49 ~vlFs~~v~K~nr~~--K~~~R~livT~~~iY~l~~~~~~~~~~~~~kr~i~l~~I-~~IsvS~~-------~D~~~vih 118 (199)
T PF06017_consen 49 KVLFSDRVQKYNRRN--KPQPRILIVTDKAIYLLDQRKVKDPKKYKLKRRIPLSDI-TGISVSPL-------SDNFFVIH 118 (199)
T ss_pred ceEEEEEEEEecCCC--CccceEEEEeCCeEEEEEEeecCCceeeEEEeccCcccc-cEEEEccC-------CCCEEEEE
Confidence 566777788877643 678899999999999886 5566667888999876 33444331 12235555
Q ss_pred e-CCeEEEEEcCCHHHHHHHHHH
Q psy9639 253 T-PQRWYQFSALSAPDRDQWIQA 274 (321)
Q Consensus 253 t-~~r~~~f~A~s~~e~~~Wv~a 274 (321)
. .+..+.|..+...|+-.=+..
T Consensus 119 v~~~~D~il~~~~k~Elv~~L~~ 141 (199)
T PF06017_consen 119 VPGEGDLILESDFKTELVTILCK 141 (199)
T ss_pred ECCCCCEEEEeCcHHHHHHHHHH
Confidence 3 467788888877555443333
No 212
>PF04714 BCL_N: BCL7, N-terminal conserver region; InterPro: IPR006804 The members of this group of sequences contain a conserved N-terminal domain which is found in the BCL7 family. The function of BCL7 proteins is unknown, though they may be involved in early development. Notably, BCL7B is commonly hemizygously deleted in patients with Williams syndrome [].
Probab=35.38 E-value=27 Score=23.08 Aligned_cols=19 Identities=21% Similarity=0.459 Sum_probs=17.3
Q ss_pred CCcceEEEEEeCCeeEeee
Q psy9639 194 DAYRKRWFTLDYRKLMYHE 212 (321)
Q Consensus 194 ~~WkkRwfvL~~~~L~Yyk 212 (321)
+.|.++|+.+.+..|..|+
T Consensus 28 r~wEKKWVtv~dtslriyK 46 (52)
T PF04714_consen 28 RKWEKKWVTVGDTSLRIYK 46 (52)
T ss_pred HHHhhceEEeccceEEEEE
Confidence 5799999999999999887
No 213
>KOG0976|consensus
Probab=33.44 E-value=33 Score=35.85 Aligned_cols=123 Identities=16% Similarity=0.199 Sum_probs=74.9
Q ss_pred eEEEEEEeCChHHHHHHHHHHHhhhhhhccccCCCCChhhhhhhhCCCcceEEEEEEeCCC-CCCCcceEEEEEeCCeeE
Q psy9639 131 TRHIYVYHEESQSIMNWYHAIRNAKFHRLQVAFPSANDSELVKLLTRDFGREGWLWKTGPK-NADAYRKRWFTLDYRKLM 209 (321)
Q Consensus 131 ~R~~~l~a~s~~e~~~W~~aLr~a~~~~l~~~~p~~~~~~l~~~~~~~~~k~G~L~K~g~~-~~~~WkkRwfvL~~~~L~ 209 (321)
+++.++-|.+.....+|+.++-.. -.+.|||.--... ....|---|-.++-....
T Consensus 788 nnTcglpaqcatyyq~w~~a~~gV------------------------grmnGwlRVyRdd~~~stwl~~wammdl~~~~ 843 (1265)
T KOG0976|consen 788 NNTCGLPAQCATYYQRWVTALEGV------------------------GRMNGWLRVYRDDAEASTWLLGWAMMDLEGDD 843 (1265)
T ss_pred CCcccccccccchHHHHHHHhhhh------------------------hhcccceeeeccccchhHHHHHHHHhhhcccc
Confidence 488999999999999999887532 0246777643221 124677777777766566
Q ss_pred eeeCCC-C--CCcceeEEcccccCceEEecCC--CCCCCCC---CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhhcc
Q psy9639 210 YHEEPL-S--AYPKGEIFLGHCSDGYTVRLGV--PPGAKDQ---GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 210 Yyk~~~-~--~~~~g~i~L~~~~~~~~V~~~~--~~~~~~~---~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ai 279 (321)
+|.... + ..|.-.|.+.. .-+..+.+. +-...+. -+.+.|..+.|..++.|+++....+|...|+++-
T Consensus 844 fy~~~gadple~p~f~idlnk--eqw~Lrtgqe~~~~v~dimrvfnvliIK~~~r~l~I~ap~~~saerwA~CLq~aq 919 (1265)
T KOG0976|consen 844 FYDMNGADPLEDPVFLIDLNK--EQWALRTGQESLTHVPDIMRVFNVLIIKDLERLLMIAAPSPKSAERWALCLQDAQ 919 (1265)
T ss_pred hhhccCCccccCceEEeecch--hHHHHHhccccccCCcchhhhheeeeecchhhhheeecCCCccHHHHHHHHHHHH
Confidence 665432 2 23334444432 112222111 0011111 2345556788999999999999999999999963
No 214
>KOG3727|consensus
Probab=32.94 E-value=11 Score=37.47 Aligned_cols=81 Identities=16% Similarity=0.244 Sum_probs=45.7
Q ss_pred CCceeeEEEEeccCCeEEeecC---CCCCceeEEeccceEEEe-ccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHH
Q psy9639 71 GKYHPRRFVLNEINDTIKYYVK---EKKEPKATLRISELNVVI-APSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMN 146 (321)
Q Consensus 71 ~~wk~R~fvL~~~~~~L~Yy~~---~~~~pkg~I~l~~~~~~~-~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~ 146 (321)
+.++|-||... +=.|.+|++ ....|-+.|.+.++.++- .|...++-+-+.+.....+ .--+|+.++++++.-.
T Consensus 373 Kg~kr~f~t~~--dl~~~~~~s~~~s~~ap~~~i~l~gcev~~dV~~~~~k~~i~l~~~~~~~-msEi~LRCd~E~QYA~ 449 (664)
T KOG3727|consen 373 KGYKRYFFTFR--DLHLSLYKSSEDSRGAPAISINLKGCEVTPDVNLSQQKYAIKLLVPTAEG-MSEIWLRCDNEQQYAR 449 (664)
T ss_pred hhhhhHHHHHH--HHHHHHHhhHhhhcCCCCCchhhcCcccCCccccccccceEEEEeecCCc-cceeEEecCCHHHHHH
Confidence 44555555443 333444444 126777888888886542 2221121111222222222 4568999999999999
Q ss_pred HHHHHHhh
Q psy9639 147 WYHAIRNA 154 (321)
Q Consensus 147 W~~aLr~a 154 (321)
||.+-|-|
T Consensus 450 WMAaCrLA 457 (664)
T KOG3727|consen 450 WMAACRLA 457 (664)
T ss_pred HHHHhhHh
Confidence 99886655
No 215
>KOG3508|consensus
Probab=32.05 E-value=0.54 Score=49.16 Aligned_cols=119 Identities=12% Similarity=0.049 Sum_probs=79.8
Q ss_pred HHHHHHhhhhcccccCC--CccccccceeeEEEeecCCCCCceeeEEEEecc--CCeEEeecC-CCCCceeEEeccceEE
Q psy9639 34 KEWIRSKYEREEFRHPE--ALTYITGHMDGFLMKRGKESGKYHPRRFVLNEI--NDTIKYYVK-EKKEPKATLRISELNV 108 (321)
Q Consensus 34 e~~ir~ky~~~~f~~~~--~~~~~~~~~~G~L~K~g~~~~~wk~R~fvL~~~--~~~L~Yy~~-~~~~pkg~I~l~~~~~ 108 (321)
-.+|++=|+--+++..+ .++|.+-.+-|.+.|++ ....|++=++.|... +-.+.|++. ....++|.|+|++..
T Consensus 337 ~eki~~iy~S~e~cevDp~k~~~s~l~~hq~~lK~~-~e~~~~ki~~sl~~~p~el~~vf~s~r~r~~~rgridls~~l- 414 (932)
T KOG3508|consen 337 GEKIKAIYESTENCEVDPSKCSYSSLPKHQALLKKC-CELAWKKIYNSLCVFPSELQLVFSSWRKRCKPRGRIDLSDRL- 414 (932)
T ss_pred HHHHHHHHcccccceeccccccccchhhHHHHHhhh-HHHHHHHHHHHHhhchHHHHHHHHHHHHhhccccchhhhhhh-
Confidence 45899999999888765 66777777778888888 556788877666422 333446666 678999999999982
Q ss_pred EeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhh
Q psy9639 109 VIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAK 155 (321)
Q Consensus 109 ~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~ 155 (321)
++........|++|.-..--.--.-|+...++..+..|+.+|++..
T Consensus 415 -v~aSLFlR~lCpaI~spslF~l~~eYp~~~tsrtLtlIak~lQnla 460 (932)
T KOG3508|consen 415 -VSASLFLRFLCPAILSPSLFNLAQEYPSPTTARTLTLIAKVLQNLA 460 (932)
T ss_pred -hhHhhhcccccHHHhhHHHhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence 2222334455555421000000115788889999999999997753
No 216
>KOG2996|consensus
Probab=30.91 E-value=1.6e+02 Score=29.84 Aligned_cols=126 Identities=13% Similarity=0.135 Sum_probs=74.8
Q ss_pred ceEEEEEEeCCCCCCCcceEEEEEeCCeeEeeeCCCCCC-cceeEEcccccCceEEecCCCCCC--C-----CCCceEEE
Q psy9639 180 GREGWLWKTGPKNADAYRKRWFTLDYRKLMYHEEPLSAY-PKGEIFLGHCSDGYTVRLGVPPGA--K-----DQGFTFTL 251 (321)
Q Consensus 180 ~k~G~L~K~g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~-~~g~i~L~~~~~~~~V~~~~~~~~--~-----~~~~~F~i 251 (321)
-.-|-|.-.+-.. +.=+.||..|-+..+..-|...+.. .+..|.|. .+.++....... + .-.+.|-|
T Consensus 407 kiDGElki~s~~~-~tkqdRyiFLfDkvviVCKrkG~sy~lke~i~l~----~y~m~d~~~~~kd~kk~~~~~ws~~f~l 481 (865)
T KOG2996|consen 407 KIDGELKITSTQA-HTKQDRYIFLFDKVVIVCKRKGDSYELKEIIYLN----AYKMSDDPIDDKDNKKVSTITWSYGFYL 481 (865)
T ss_pred CcCceEEEeehhc-CCccceEEeEecceEEEeeccCcchhHHHHHHHH----hhccccCCCCchhhhhccceeeeeeEEE
Confidence 3457776655443 5678899999999888888775543 34445552 244443211110 1 12467877
Q ss_pred E-eCC-eEEEEEcCCHHHHHHHHHHHhhccccccc----cCceEE-EEecCCHHHHHHHHHHHHHh
Q psy9639 252 K-TPQ-RWYQFSALSAPDRDQWIQAVQTGFTFTLK----TPQRWY-QFSALSAPDRDQWIQAVQTV 310 (321)
Q Consensus 252 ~-t~~-r~~~f~A~s~~e~~~Wv~aL~~ai~~~l~----~~~~~~-~l~a~s~~e~~~Wi~al~~~ 310 (321)
+ +.+ .-|.|...+++-+..||.++..|++-.-. ..+..| -.+.+....|+..--.|+..
T Consensus 482 I~tqg~ngl~fy~Kte~~kkkWmeqfema~SNi~Pdya~an~H~fqmhtF~~~tsCkvC~mllrGt 547 (865)
T KOG2996|consen 482 IHTQGRNGLEFYCKTEDLKKKWMEQFEMAKSNISPDYARANNHDFQMHTFKNTTSCKVCQMLLRGT 547 (865)
T ss_pred EEEcCCcceEEEEecHHHHHHHHHHHHHHHhcCCcccccccCcceEEEeccCCcchHHHHHHhhhh
Confidence 7 444 46778888899999999999998752222 222233 23445555565554444443
No 217
>KOG3520|consensus
Probab=30.15 E-value=78 Score=34.65 Aligned_cols=56 Identities=13% Similarity=0.209 Sum_probs=41.7
Q ss_pred eeEEeccceEEEeccCCCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhh
Q psy9639 98 KATLRISELNVVIAPSKIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKF 156 (321)
Q Consensus 98 kg~I~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~ 156 (321)
-.+|+|..+ . .-+.-....||-|+++.+.....|=+.|.|..|..-|+..|+.+..
T Consensus 667 spVisL~~l-i--vRevAtd~ka~FlIs~s~~~pqmYEL~a~T~serntW~~li~~~v~ 722 (1167)
T KOG3520|consen 667 SPVISLQKL-I--VREVATDEKAFFLISMSDQGPEMYELVAQSKSERNTWIQLIQDAVA 722 (1167)
T ss_pred CCceehHHH-H--HHHHhccccceEEEecCCCCCeeEEEecCCHHHHHHHHHHHHHHHH
Confidence 347888876 2 1122234567877777766778999999999999999999988754
No 218
>PF14470 bPH_3: Bacterial PH domain
Probab=29.10 E-value=2.2e+02 Score=20.54 Aligned_cols=76 Identities=12% Similarity=0.148 Sum_probs=50.7
Q ss_pred CcceEEEEEeCCeeEeeeCC-CCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEEEEEcCCHHHHHHHHH
Q psy9639 195 AYRKRWFTLDYRKLMYHEEP-LSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWYQFSALSAPDRDQWIQ 273 (321)
Q Consensus 195 ~WkkRwfvL~~~~L~Yyk~~-~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~~f~A~s~~e~~~Wv~ 273 (321)
....-++++++.+|.++... ......-.|++..+.. |+... + --...+.|.+++..+.|..=+..+.+.-++
T Consensus 20 ~~~~g~l~~TnkRlif~~~~~~~~~~~~~i~y~~I~~---v~~~~--g--~~~~~i~i~~~~~~~~i~~i~k~~~~~~~~ 92 (96)
T PF14470_consen 20 TSFPGVLVLTNKRLIFYSKGMFGGKKFESIPYDDITS---VSFKK--G--ILGGKITIETNGEKIKIDNIQKGDVKEFYE 92 (96)
T ss_pred cCceeEEEEeCCEEEEEEcccCCCceEEEEEhhheEE---EEEEc--c--ccccEEEEEECCEEEEEEEcCHHHHHHHHH
Confidence 45566889999999988764 3334567788876632 33211 1 122358888999999987777777777777
Q ss_pred HHhh
Q psy9639 274 AVQT 277 (321)
Q Consensus 274 aL~~ 277 (321)
.|++
T Consensus 93 ~i~~ 96 (96)
T PF14470_consen 93 YIKE 96 (96)
T ss_pred HHhC
Confidence 6653
No 219
>KOG3549|consensus
Probab=29.06 E-value=2.7e+02 Score=26.41 Aligned_cols=114 Identities=18% Similarity=0.331 Sum_probs=68.7
Q ss_pred HHHHHHHHH-------------hhhhcccccCCCccccccceeeEEEeecCCC---CCceeeEEEEeccCCeEEeecCCC
Q psy9639 31 VLLKEWIRS-------------KYEREEFRHPEALTYITGHMDGFLMKRGKES---GKYHPRRFVLNEINDTIKYYVKEK 94 (321)
Q Consensus 31 ~~~e~~ir~-------------ky~~~~f~~~~~~~~~~~~~~G~L~K~g~~~---~~wk~R~fvL~~~~~~L~Yy~~~~ 94 (321)
..--+|++| |--.+.|...++. ..-||..-+-..+ ..++.|+..|+ +.++.-|..
T Consensus 247 ~d~~dWL~ait~Ni~~LT~~nmK~~Nrnf~v~~qi-----vyMGWvne~~q~~~s~q~y~P~FLaLk--G~~~y~F~t-- 317 (505)
T KOG3549|consen 247 ADLSDWLKAITDNIVGLTHLNMKLYNRNFAVGEQI-----VYMGWVNEGVQNNISWQSYKPRFLALK--GTEVYLFET-- 317 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccceE-----EEeeeccccccCcccccccCceeEEec--CcEEEEEcC--
Confidence 344568876 4444555444433 3358887655544 34778999998 888887866
Q ss_pred CCceeEEeccceEEEec-----------cC-CCCCCceeEEEEeecCceEEEEEEeCChHHHHHHHHHHHhhhhh
Q psy9639 95 KEPKATLRISELNVVIA-----------PS-KIEHPHSLQLTFMKDGSTRHIYVYHEESQSIMNWYHAIRNAKFH 157 (321)
Q Consensus 95 ~~pkg~I~l~~~~~~~~-----------~~-~~~~~~~~~i~~~~~~~~R~~~l~a~s~~e~~~W~~aLr~a~~~ 157 (321)
.|.-+-+.+....++. .+ ....+++|.+. .++....||..+...|+-.|=++.+.+.+.
T Consensus 318 -PPv~t~dw~rAe~ty~vye~mfki~Kdsd~~D~R~~CF~~q---s~~ge~~yfsVEl~seLa~wE~sfq~Atf~ 388 (505)
T KOG3549|consen 318 -PPVNTADWSRAEVTYKVYETMFKIVKDSDTVDSRQHCFLLQ---SSGGEPRYFSVELRSELARWENSFQAATFT 388 (505)
T ss_pred -CCcchhhhhhhhhhHHHHHHHHHHhccccccccccceEEEE---cCCCCceEEEEehhhHHHHHHHHHhhHHhH
Confidence 1222222222222110 00 12356777653 344566789999999999999998877653
No 220
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=28.47 E-value=1.2e+02 Score=22.59 Aligned_cols=31 Identities=23% Similarity=0.364 Sum_probs=24.0
Q ss_pred CceEEEEeCCeEEEEEcCCHHHHHHHHHHHhh
Q psy9639 246 GFTFTLKTPQRWYQFSALSAPDRDQWIQAVQT 277 (321)
Q Consensus 246 ~~~F~i~t~~r~~~f~A~s~~e~~~Wv~aL~~ 277 (321)
...|.|.. +++|+..|.|.+|+...|..|-.
T Consensus 56 ~~~F~l~~-~k~y~W~a~s~~Ek~~Fi~~L~k 86 (91)
T PF15277_consen 56 TPEFDLTF-DKPYYWEASSAKEKNTFIRSLWK 86 (91)
T ss_dssp TTEEEEES-SSEEEEEESSHHHHHHHHHHHHH
T ss_pred CcCEEEEE-CCCcEEEeCCHHHHHHHHHHHHH
Confidence 45799988 56999888888888888777743
No 221
>PF12989 DUF3873: Domain of unknown function, B. Theta Gene description (DUF3873); InterPro: IPR024356 This entry represents a family of uncharacterised proteins found primarily in Bacteroides species. The Bacteroides thetaiotaomicron gene appears to be upregulated in the presence of host or other bacterial species compared to growth in pure culture [, ].
Probab=23.21 E-value=24 Score=24.94 Aligned_cols=19 Identities=32% Similarity=0.457 Sum_probs=16.7
Q ss_pred CCCCCCCChHHHHHHHHHh
Q psy9639 22 KVPTSSCPQVLLKEWIRSK 40 (321)
Q Consensus 22 ~~p~~~~~~~~~e~~ir~k 40 (321)
..|+-+.|+.+|+.||..|
T Consensus 50 V~~tLeEcRr~rd~WL~~k 68 (69)
T PF12989_consen 50 VAPTLEECRRLRDEWLSKK 68 (69)
T ss_pred hhccHHHHHHHHHHHHhcc
Confidence 5788999999999999875
No 222
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=22.49 E-value=98 Score=25.38 Aligned_cols=54 Identities=15% Similarity=0.333 Sum_probs=38.8
Q ss_pred eEEcccccCceEEecCCCCCCCCCCceEEEEe--------CCeEEEEEcCCHHHHHHHHHHHhhccc
Q psy9639 222 EIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKT--------PQRWYQFSALSAPDRDQWIQAVQTGFT 280 (321)
Q Consensus 222 ~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t--------~~r~~~f~A~s~~e~~~Wv~aL~~ai~ 280 (321)
.||+.. ..|+...+.+. ...+.++|++ |+++|.|+..+++.++..+++|++-+.
T Consensus 94 miP~~a----lQVR~~n~ad~-e~~~vwEliH~kSe~egRpE~vfqLCcS~~E~k~~flK~Irsilr 155 (160)
T cd01255 94 LIPVTA----LQVRASSAADM-ESNFLWELIHLKSELEGRPEKVFVLCCSTAESRNAFLKTIRSILR 155 (160)
T ss_pred eeceee----eeeecCCCcCc-ccceEEEEEeecccccCCCcceEEEecCCHHHHHHHHHHHHHHHH
Confidence 456533 44555443332 3567788874 359999999999999999999988653
No 223
>PF14261 DUF4351: Domain of unknown function (DUF4351)
Probab=22.43 E-value=95 Score=21.22 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=22.3
Q ss_pred EcCCHHHHHHHHHHHhhccccccccCceEEEEecCCHHHHHHHH
Q psy9639 261 SALSAPDRDQWIQAVQTGFTFTLKTPQRWYQFSALSAPDRDQWI 304 (321)
Q Consensus 261 ~A~s~~e~~~Wv~aL~~ai~~~l~~~~~~~~l~a~s~~e~~~Wi 304 (321)
.+-|.+.++.|..+| |-+.|.+|...|+
T Consensus 32 ~~l~~eqLE~l~e~i----------------ldf~~l~dL~~wL 59 (59)
T PF14261_consen 32 QQLSLEQLEALAEAI----------------LDFNSLEDLENWL 59 (59)
T ss_pred HcCCHHHHHHHHHHH----------------hCCCCHHHHHhhC
Confidence 345678888899888 8888888888884
No 224
>PF00377 Prion: Prion/Doppel alpha-helical domain; InterPro: IPR022416 This entry represents the C-terminal beta-ribbon domain found in prion proteins [] and the prion-like Doppel proteins []. This domain has a beta-alpha-beta-alpha(2) structure that contains an antiparallel beta-ribbon. Prion protein (PrP-c) [, , ] is a small glycoprotein found in high quantity in the brain of animals infected with certain degenerative neurological diseases, such as sheep scrapie and bovine spongiform encephalopathy (BSE), and the human dementias Creutzfeldt-Jacob disease (CJD) and Gerstmann-Straussler syndrome (GSS). PrP-c is encoded in the host genome and is expressed both in normal and infected cells. During infection, however, the PrP-c molecule become altered (conformationally rather than at the amino acid level) to an abnormal isoform, PrP-sc. In detergent-treated brain extracts from infected individuals, fibrils composed of polymers of PrP-sc, namely scrapie-associated fibrils or prion rods, can be evidenced by electron microscopy. The precise function of the normal PrP isoform in healthy individuals remains unknown. Several results, mainly obtained in transgenic animals, indicate that PrP-c might play a role in long-term potentiation, in sleep physiology, in oxidative burst compensation (PrP can fix four Cu2+ through its octarepeat domain), in interactions with the extracellular matrix (PrP-c can bind to the precursor of the laminin receptor, LRP), in apoptosis and in signal transduction (costimulation of PrP-c induces a modulation of Fyn kinase phosphorylation) []. The normal isoform, PrP-c, is anchored at the cell membrane, in rafts, through a glycosyl phosphatidyl inositol (GPI); its half-life at the cell surface is 5 h, after which the protein is internalised through a caveolae-dependent mechanism and degraded in the endolysosome compartment. Conversion between PrP-c and PrP-sc occurs likely during the internalisation process. In humans, PrP is a 253 amino acid protein, which has a molecular weight of 35-36 kDa. It has two hexapeptides and repeated octapeptides at the N terminus, a disulphide bond and is associated at the C terminus with a GPI, which enables it to anchor to the external part of the cell membrane. The secondary structure of PrP-c is mainly composed of alpha-helices, whereas PrP-sc is mainly beta-sheets: transconformation of alpha-helices into beta-sheets has been proposed as the structural basis by which PrP acquires pathogenicity in TSEs. The three-dimensional structures shows the protein to be made of a globular domain which includes three alpha-helices and two small antiparallel beta-sheet structures, and a long flexible tail whose conformation depends on the biophysical parameters of the environment. Crystals of the globular domain of PrP have recently been obtained; their analysis suggests a possible dimerisation of the protein through the three-dimensional swapping of the C-terminal helix 3 and rearrangement of the disulphide bond.; GO: 0051260 protein homooligomerization, 0016020 membrane; PDB: 2KU4_A 3HER_A 2LEJ_A 3HES_B 2IV4_A 1E1J_A 1HJM_A 3HJ5_B 2KUN_A 2K1D_A ....
Probab=21.98 E-value=58 Score=25.63 Aligned_cols=37 Identities=19% Similarity=0.201 Sum_probs=27.0
Q ss_pred cccchHHHHhhhcc---CCCCCCCCCCCCChHHHHHHHHH
Q psy9639 3 QIGNNVSKLKYEMR---VPASYKVPTSSCPQVLLKEWIRS 39 (321)
Q Consensus 3 ~~gn~~~~~~~e~~---~p~~~~~p~~~~~~~~~e~~ir~ 39 (321)
..||...|.+||++ .|...+-|.-+...+-+|.|+++
T Consensus 7 ~Fg~~~e~Ryy~~n~~ryPd~VyY~~~~e~~Vt~~~FV~d 46 (117)
T PF00377_consen 7 HFGNEYENRYYEENYWRYPDQVYYRGCSEYNVTKEVFVTD 46 (117)
T ss_dssp ETSSHHHHHHHHHHGGGSTSSEEECTGGCSSSSHHHHHHH
T ss_pred cCCChhhhHHHHHHHHhCCCceecCCccccCcchhhHHHH
Confidence 46999999999994 58855444445545567889986
No 225
>PLN03114 ADP-ribosylation factor GTPase-activating protein AGD10; Provisional
Probab=20.38 E-value=1.3e+02 Score=28.66 Aligned_cols=50 Identities=16% Similarity=-0.021 Sum_probs=31.0
Q ss_pred CccccchHHHHhhhccCCCCCCCC--CCCCChHHHHHHHHHhhhhcccccCC
Q psy9639 1 MKQIGNNVSKLKYEMRVPASYKVP--TSSCPQVLLKEWIRSKYEREEFRHPE 50 (321)
Q Consensus 1 m~~~gn~~~~~~~e~~~p~~~~~p--~~~~~~~~~e~~ir~ky~~~~f~~~~ 50 (321)
|...||..||.+|+.+--..-..+ ..++....+-+=+.+|+..+.+....
T Consensus 78 Mk~GGN~rA~~fF~qhG~~~~~~~~~KY~S~aA~~Yre~L~keVa~~~a~~~ 129 (395)
T PLN03114 78 MIYGGNNRAQVFFKQYGWSDGGKTEAKYTSRAADLYKQILAKEVAKSKAEEE 129 (395)
T ss_pred HHHhcCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHHHHHHHhhhccc
Confidence 567899999999998631111122 33344444444488888888776443
No 226
>KOG1329|consensus
Probab=20.10 E-value=82 Score=33.41 Aligned_cols=93 Identities=15% Similarity=0.146 Sum_probs=61.2
Q ss_pred ceEEEEEEe-CCCCCCCcceEEEEEeCCeeEeeeCCCCCCcceeEEcccccCceEEecCCCCCCCCCCceEEEEeCCeEE
Q psy9639 180 GREGWLWKT-GPKNADAYRKRWFTLDYRKLMYHEEPLSAYPKGEIFLGHCSDGYTVRLGVPPGAKDQGFTFTLKTPQRWY 258 (321)
Q Consensus 180 ~k~G~L~K~-g~~~~~~WkkRwfvL~~~~L~Yyk~~~~~~~~g~i~L~~~~~~~~V~~~~~~~~~~~~~~F~i~t~~r~~ 258 (321)
-++|++.++ +.....+|.+||.+++...+.|.+++.. .+..++-.. ++- .....+....+..|.+....|.+
T Consensus 176 h~~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~~---~~~~~Il~~-d~~---~~~~~~~~~~~~~~~~~~~~~~~ 248 (887)
T KOG1329|consen 176 HKAGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHRI---GGWFPILDN-DGK---PHQKGSNESLRLGFTPMEKDRNL 248 (887)
T ss_pred ccccEEEEeecCCccccceeEEEEeccchhhhhccccc---cceeeeecc-CCc---cccCCcccceEEeeEeechhhhh
Confidence 468999887 3333357999999999999999887422 233333211 110 11111111223567777778999
Q ss_pred EEEcCCHHHHHHHHHHHhhcc
Q psy9639 259 QFSALSAPDRDQWIQAVQTGF 279 (321)
Q Consensus 259 ~f~A~s~~e~~~Wv~aL~~ai 279 (321)
.+...+..+...|..++-...
T Consensus 249 ~~~~~s~~~~r~~~~~~~~~~ 269 (887)
T KOG1329|consen 249 KLGCKSGRSFRGWPGTIFPQR 269 (887)
T ss_pred hheeccccccCCccceeeehh
Confidence 999999999999999887754
Done!