BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy964
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5R585|BTBDA_PONAB BTB/POZ domain-containing protein 10 OS=Pongo abelii GN=BTBD10 PE=2
SV=1
Length = 475
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 78/90 (86%), Gaps = 3/90 (3%)
Query: 36 YKEKIYRSTSTTMYRFFKYIENRDVAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRS 95
Y + IY ST +YRFFKYIENRDVAK V+KERGLKKIRLGIEGYPTYKEKVKKR GGR
Sbjct: 333 YSQIIY---STKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGRP 389
Query: 96 DVIYNYVQRPFIHMSWEKEEAKSRHVDFQA 125
+VIYNYVQRPFI MSWEKEE KSRHVDFQ
Sbjct: 390 EVIYNYVQRPFIRMSWEKEEGKSRHVDFQC 419
>sp|Q9BSF8|BTBDA_HUMAN BTB/POZ domain-containing protein 10 OS=Homo sapiens GN=BTBD10 PE=1
SV=2
Length = 475
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 78/90 (86%), Gaps = 3/90 (3%)
Query: 36 YKEKIYRSTSTTMYRFFKYIENRDVAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRS 95
Y + IY ST +YRFFKYIENRDVAK V+KERGLKKIRLGIEGYPTYKEKVKKR GGR
Sbjct: 333 YSQIIY---STKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGRP 389
Query: 96 DVIYNYVQRPFIHMSWEKEEAKSRHVDFQA 125
+VIYNYVQRPFI MSWEKEE KSRHVDFQ
Sbjct: 390 EVIYNYVQRPFIRMSWEKEEGKSRHVDFQC 419
>sp|Q80X66|BTBDA_MOUSE BTB/POZ domain-containing protein 10 OS=Mus musculus GN=Btbd10 PE=1
SV=1
Length = 475
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 78/90 (86%), Gaps = 3/90 (3%)
Query: 36 YKEKIYRSTSTTMYRFFKYIENRDVAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRS 95
Y + IY ST +YRFFKYIENRDVAK V+KERGLKKIRLGIEGYPTYKEKVKKR GGR
Sbjct: 333 YSQIIY---STKLYRFFKYIENRDVAKSVLKERGLKKIRLGIEGYPTYKEKVKKRPGGRP 389
Query: 96 DVIYNYVQRPFIHMSWEKEEAKSRHVDFQA 125
+VIYNYVQRPFI MSWEKEE KSRHVDFQ
Sbjct: 390 EVIYNYVQRPFIRMSWEKEEGKSRHVDFQC 419
>sp|Q7Z5Y7|KCD20_HUMAN BTB/POZ domain-containing protein KCTD20 OS=Homo sapiens GN=KCTD20
PE=1 SV=1
Length = 419
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 73/81 (90%)
Query: 45 STTMYRFFKYIENRDVAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRSDVIYNYVQR 104
S+ +YRFFKYIENRDVAK V+KERGLK IR+GIEGYPT KEK+K+R GGRS+VIYNYVQR
Sbjct: 289 SSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGYPTCKEKIKRRPGGRSEVIYNYVQR 348
Query: 105 PFIHMSWEKEEAKSRHVDFQA 125
PFI MSWEKEE KSRHVDFQ
Sbjct: 349 PFIQMSWEKEEGKSRHVDFQC 369
>sp|Q8CDD8|KCD20_MOUSE BTB/POZ domain-containing protein KCTD20 OS=Mus musculus GN=Kctd20
PE=2 SV=1
Length = 419
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 73/81 (90%)
Query: 45 STTMYRFFKYIENRDVAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRSDVIYNYVQR 104
S+ +YRFFKYIENRDVAK V+KERGLK IR+GIEGYPT KEK+K+R GGRS+VIYNYVQR
Sbjct: 289 SSKLYRFFKYIENRDVAKTVLKERGLKNIRIGIEGYPTCKEKIKRRPGGRSEVIYNYVQR 348
Query: 105 PFIHMSWEKEEAKSRHVDFQA 125
PFI MSWEKEE KSRHVDFQ
Sbjct: 349 PFIQMSWEKEEGKSRHVDFQC 369
>sp|Q9FR35|PRX2C_ORYSJ Peroxiredoxin-2C OS=Oryza sativa subsp. japonica GN=PRXIIC PE=1
SV=1
Length = 162
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 77 IEGYPTYKEKVKKRAGGRSDVIYNYVQRPFIHMSWEKEEAKSRHVDFQA 125
+ G+ E++K + G D++ V PF+ +W K +++HV F A
Sbjct: 56 VPGFINQAEQLKAK--GVDDILLVSVNDPFVMKAWAKSYPENKHVKFLA 102
>sp|B4SAG7|ISPD_PELPB 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 /
BU-1) GN=ispD PE=3 SV=1
Length = 243
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 15/155 (9%)
Query: 8 IENRDVAKQVMKERGLKKIRLGIEGYPT--YKEKIYRSTSTTMYRFFKY-IENRDVAKQV 64
I + K++ G K L + G+P + K ++ S+ + +ENR + +++
Sbjct: 7 IAASGIGKRMQLREGESKQLLEVGGFPVIYHTLKAFQMASSVKAIYIATRLENRSILEEL 66
Query: 65 MKERGLKKIRLGIEGYPTYKEKV----------KKRAGGRSDVIYNY-VQRPFIHMSWEK 113
G K++ IEG ++ V K+ G +++I + RPFI S E
Sbjct: 67 AAASGFSKLKAIIEGGKERQDSVYNCIRAIEEEKRLTGASAEIILVHDGARPFIR-SEEI 125
Query: 114 EEAKSRHVDFQATLPLDWISDNIEFNLRGYKFITE 148
+E + + A +P + D I++ +F E
Sbjct: 126 DEIARLSMQYGACVPANRPKDTIKYVGENPEFFGE 160
>sp|Q9Z1Q9|SYVC_MOUSE Valine--tRNA ligase OS=Mus musculus GN=Vars PE=2 SV=1
Length = 1263
Score = 30.8 bits (68), Expect = 3.2, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 60 VAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRSDVIYNYVQRPFIHMSWEK 113
V K++ KERGL + +LG E + E+V K + D IY+ +++ + W++
Sbjct: 391 VEKKLWKERGLNRHQLGREA---FLEEVWKWKAEKGDRIYHQLKKLGSSLDWDR 441
>sp|Q8D2R3|PURT_WIGBR Phosphoribosylglycinamide formyltransferase 2 OS=Wigglesworthia
glossinidia brevipalpis GN=purT PE=3 SV=1
Length = 392
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 72 KIRLGIEGYPTYKEKVKKRAGGRSDVIYNYVQRPFIHMSWEKEEAKSR----HVDFQATL 127
KI+ + GYP + + +G VIYN ++ H SWEK + R V + +
Sbjct: 142 KIKTKVIGYPCLIKPIMSSSGKGQSVIYN--EKELRH-SWEKSQTYGRTSLGEVIIEKII 198
Query: 128 PLDW-ISDNIEFNLRGYKFITEIG 150
P D+ I+ + ++ G F IG
Sbjct: 199 PFDFEITLLVVNSVDGMHFCLPIG 222
>sp|Q8CC88|VWA8_MOUSE von Willebrand factor A domain-containing protein 8 OS=Mus musculus
GN=Vwa8 PE=2 SV=2
Length = 1905
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 6 KYIENRDVAKQVMKERGLKKIRLGIEGYPTYKEKIYRSTSTTMYRFFKYIENRDVAKQVM 65
K I+ K + K RG + +LG + ++ S +MYRF V +++
Sbjct: 1683 KIIDGLAGEKSIYKRRGDLEPQLGSPQQKPKRLRLVVDVSGSMYRF------NGVDRRL- 1735
Query: 66 KERGLKKIRLGIEGYPTYKEKVKKRAGGRSDVIYN 100
ER ++ + + +E + Y+EK K G S YN
Sbjct: 1736 -ERSMEAVCMVMEAFENYEEKFKYDIAGHSGDGYN 1769
>sp|Q9Z4P0|FRD2_SHEFN Fumarate reductase flavoprotein subunit OS=Shewanella frigidimarina
(strain NCIMB 400) GN=ifcA PE=1 SV=1
Length = 588
Score = 30.4 bits (67), Expect = 4.5, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 3 RFFKYIENRDVAKQVMKERGLKKIRLGIEGYPTYKEKIYRSTSTTMYRFFKYIE---NRD 59
RF + RD A + ++ G + + ++Y+ M R + ++E D
Sbjct: 411 RFISELTTRDKASDAILKQP------GQFAWIIFDNQLYKKAK--MVRGYDHLEMLYKGD 462
Query: 60 VAKQVMKERGLKKIRLG--IEGYPTYKEKVKKRAGGRSDVIYNYVQRPF 106
+Q+ K G+K L + Y Y K A GR+D+ N Q P+
Sbjct: 463 TVEQLAKSTGMKVADLAKTVSDYNGYVASGKDTAFGRADMPLNMTQSPY 511
>sp|Q9U308|JAC1_CAEEL Juxtamembrane domain-associated catenin OS=Caenorhabditis elegans
GN=jac-1 PE=1 SV=2
Length = 1254
Score = 30.0 bits (66), Expect = 6.6, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 15 KQVMKERGLKKIRLGIEGYPTYKEKIYRSTSTTMYRFFKYIENRDVAKQVMKERGLKK 72
K V + +G K+R YPTY ++ + S +Y +++ E D K GLK+
Sbjct: 1100 KDVHELKGTDKLRALSRSYPTYSHRVCKYASQVLYVMWQHKELHD----GFKRSGLKE 1153
>sp|Q54WT4|DRG2_DICDI Developmentally-regulated GTP-binding protein 2 homolog
OS=Dictyostelium discoideum GN=drg2 PE=3 SV=1
Length = 364
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 60 VAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRSDVIYNYVQRPFIHMSWEKEEAKSR 119
+AK ++ E + L I PT E + G RS + YV HMS E + SR
Sbjct: 202 LAKSILHEYKIFNCDLVIRCDPTVDELIDAIEGRRSYIRCLYVYNKMDHMSMEDVDRLSR 261
Query: 120 H-----VDFQATLPLDWISDNI 136
+ L LD++ D I
Sbjct: 262 QPNSVVISCNMNLNLDFLLDKI 283
>sp|Q04462|SYVC_RAT Valine--tRNA ligase OS=Rattus norvegicus GN=Vars PE=2 SV=2
Length = 1264
Score = 29.6 bits (65), Expect = 7.7, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 60 VAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGRSDVIYNYVQRPFIHMSWEK 113
V K++ KERGL + +LG E + ++V K + D IY+ +++ + W++
Sbjct: 392 VEKKLWKERGLNRHQLGREA---FLQEVWKWKAEKGDRIYHQLKKLGSSLDWDR 442
>sp|Q8CG14|CS1A_MOUSE Complement C1s-A subcomponent OS=Mus musculus GN=C1sa PE=2 SV=2
Length = 688
Score = 29.6 bits (65), Expect = 8.3, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 101 YVQRPFIHMSWEKEEAKSRHVDFQATLPLDWISDNIE 137
Y +R FIH SW+KE+ + +F + L + D ++
Sbjct: 504 YSKRVFIHPSWKKEDDPNTRTNFDNDIALVQLKDPVK 540
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,699,358
Number of Sequences: 539616
Number of extensions: 2385464
Number of successful extensions: 5384
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 5363
Number of HSP's gapped (non-prelim): 45
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)