Query psy964
Match_columns 154
No_of_seqs 45 out of 47
Neff 2.6
Searched_HMMs 13730
Date Sat Aug 17 00:51:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy964.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/964hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1fova_ c.47.1.1 (A:) Glutared 36.2 9 0.00065 23.1 2.0 35 60-94 16-50 (82)
2 d1a8ya1 c.47.1.3 (A:3-126) Cal 26.8 7.2 0.00053 25.0 0.3 11 74-84 84-94 (124)
3 d1dfup_ b.53.1.1 (P:) Ribosoma 24.1 10 0.00074 24.7 0.6 9 116-124 84-92 (94)
4 d1n2aa1 a.45.1.1 (A:81-201) Cl 23.4 20 0.0015 22.3 2.1 25 47-71 97-121 (121)
5 d1r7ha_ c.47.1.1 (A:) Glutared 20.1 33 0.0024 19.9 2.4 32 59-90 15-46 (74)
6 d1ghsa_ c.1.8.3 (A:) Plant bet 18.4 21 0.0016 26.9 1.5 16 59-75 17-32 (306)
7 d2bz1a1 c.144.1.1 (A:1-174) GT 17.3 25 0.0018 24.8 1.6 19 57-75 129-147 (174)
8 d2zjrs1 b.53.1.1 (S:1-175) Rib 16.7 22 0.0016 25.3 1.2 27 116-142 76-102 (175)
9 d1g7ea_ c.47.1.7 (A:) Endoplas 16.7 12 0.0009 23.9 -0.2 11 74-84 77-87 (122)
10 d2c0ga2 c.47.1.7 (A:1024-1145) 16.4 20 0.0015 22.8 0.8 9 75-83 77-85 (122)
No 1
>d1fova_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase) {Escherichia coli, Grx3 [TaxId: 562]}
Probab=36.19 E-value=9 Score=23.15 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=28.1
Q ss_pred HHHHHHHhhcccccccccccCCchHHHhhhcCCCc
Q psy964 60 VAKQVMKERGLKKIRLGIEGYPTYKEKVKKRAGGR 94 (154)
Q Consensus 60 VakqvLKeRgLKkirlgiEg~pt~kekvk~r~ggr 94 (154)
-||++|+++|++=--+=|..-|...+.+++..|.+
T Consensus 16 ~ak~~L~~~~i~y~~~di~~~~~~~~~~~~~~g~~ 50 (82)
T d1fova_ 16 RAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRT 50 (82)
T ss_dssp HHHHHHHHHTCCCEEEECTTCSHHHHHHHHHHSSC
T ss_pred HHHHHHHHcCCCeEEEeccchHHHHHHHHHHhCCC
Confidence 48899999999877777888888888888876543
No 2
>d1a8ya1 c.47.1.3 (A:3-126) Calsequestrin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=26.78 E-value=7.2 Score=24.99 Aligned_cols=11 Identities=18% Similarity=0.320 Sum_probs=9.1
Q ss_pred ccccccCCchH
Q psy964 74 RLGIEGYPTYK 84 (154)
Q Consensus 74 rlgiEg~pt~k 84 (154)
+.||.||||.+
T Consensus 84 ~~~I~~yPTi~ 94 (124)
T d1a8ya1 84 KLGLTEEDSIY 94 (124)
T ss_dssp TTTCCSTTCEE
T ss_pred ccccccCCcEE
Confidence 47999999973
No 3
>d1dfup_ b.53.1.1 (P:) Ribosomal protein L25 {Escherichia coli [TaxId: 562]}
Probab=24.13 E-value=10 Score=24.67 Aligned_cols=9 Identities=44% Similarity=0.822 Sum_probs=6.8
Q ss_pred ccccceeee
Q psy964 116 AKSRHVDFQ 124 (154)
Q Consensus 116 ~ksrhvdfq 124 (154)
..--|||||
T Consensus 84 ~~i~HvDF~ 92 (94)
T d1dfup_ 84 PKLQHIDFV 92 (94)
T ss_dssp SCEEEEEEE
T ss_pred CCEEEEeee
Confidence 355799998
No 4
>d1n2aa1 a.45.1.1 (A:81-201) Class beta GST {Escherichia coli [TaxId: 562]}
Probab=23.35 E-value=20 Score=22.26 Aligned_cols=25 Identities=20% Similarity=0.440 Sum_probs=22.4
Q ss_pred chhhhhhhhhhhHHHHHHHHhhccc
Q psy964 47 TMYRFFKYIENRDVAKQVMKERGLK 71 (154)
Q Consensus 47 ~LYRFfKYIENRdVakqvLKeRgLK 71 (154)
.+.++++=+++|...+++|++-|||
T Consensus 97 ~l~~w~~ri~~rpav~~~l~~egl~ 121 (121)
T d1n2aa1 97 HIAAFMQRMAERPEVQDALSAEGLK 121 (121)
T ss_dssp HHHHHHHHHHTSHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 4778888889999999999999986
No 5
>d1r7ha_ c.47.1.1 (A:) Glutaredoxin-like NRDH-redoxin {Corynebacterium ammoniagenes [TaxId: 1697]}
Probab=20.07 E-value=33 Score=19.93 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=24.0
Q ss_pred HHHHHHHHhhcccccccccccCCchHHHhhhc
Q psy964 59 DVAKQVMKERGLKKIRLGIEGYPTYKEKVKKR 90 (154)
Q Consensus 59 dVakqvLKeRgLKkirlgiEg~pt~kekvk~r 90 (154)
+-||++|+++|++=.-+=|+.-|...+.++..
T Consensus 15 ~~ak~~L~~~~i~~~~~~i~~~~~~~~~~~~~ 46 (74)
T d1r7ha_ 15 TATKKALDRAGLAYNTVDISLDDEARDYVMAL 46 (74)
T ss_dssp HHHHHHHHHTTCCCEEEETTTCHHHHHHHHHT
T ss_pred HHHHHHHHHcCCceEEEEccCCHHHHHHHHHh
Confidence 35788888888887777777777777777543
No 6
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]}
Probab=18.44 E-value=21 Score=26.93 Aligned_cols=16 Identities=31% Similarity=0.775 Sum_probs=13.2
Q ss_pred HHHHHHHHhhccccccc
Q psy964 59 DVAKQVMKERGLKKIRL 75 (154)
Q Consensus 59 dVakqvLKeRgLKkirl 75 (154)
+|+ ++||+.|++.|||
T Consensus 17 ~Vv-~llks~~i~~VRl 32 (306)
T d1ghsa_ 17 DVV-QLYRSKGINGMRI 32 (306)
T ss_dssp HHH-HHHHHHTCCEEEE
T ss_pred HHH-HHHHhCCCCEEEE
Confidence 344 6999999999997
No 7
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]}
Probab=17.25 E-value=25 Score=24.80 Aligned_cols=19 Identities=21% Similarity=0.447 Sum_probs=16.7
Q ss_pred hhHHHHHHHHhhccccccc
Q psy964 57 NRDVAKQVMKERGLKKIRL 75 (154)
Q Consensus 57 NRdVakqvLKeRgLKkirl 75 (154)
+=.++-|.|++-|++||+|
T Consensus 129 ~yGiGAQIL~dLGv~km~L 147 (174)
T d2bz1a1 129 DFTLCADMFKLLGVNEVRL 147 (174)
T ss_dssp CTHHHHHHHHHTTCCSEEE
T ss_pred hhhHHHHHHHHcCCCeEEE
Confidence 4468899999999999997
No 8
>d2zjrs1 b.53.1.1 (S:1-175) Ribosomal protein TL5 (general stress protein CTC) {Deinococcus radiodurans [TaxId: 1299]}
Probab=16.75 E-value=22 Score=25.30 Aligned_cols=27 Identities=19% Similarity=0.186 Sum_probs=18.2
Q ss_pred ccccceeeeeecCccccccceeeccCC
Q psy964 116 AKSRHVDFQATLPLDWISDNIEFNLRG 142 (154)
Q Consensus 116 ~ksrhvdfqcv~~~~~~~~ni~~n~~g 142 (154)
..--|||||-|.....+--+|-..+-|
T Consensus 76 ~~i~HvDF~~v~~~~~i~v~VPi~~~G 102 (175)
T d2zjrs1 76 RAPIHVDFYMVTYGEPVEVSVPVHTTG 102 (175)
T ss_dssp CCEEEEEEECCCSSCCCEEEEECEEES
T ss_pred CceeEEEEEecCCCcEEEEEEEEEeec
Confidence 445799999998777765555444444
No 9
>d1g7ea_ c.47.1.7 (A:) Endoplasmic reticulum protein ERP29, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=16.68 E-value=12 Score=23.89 Aligned_cols=11 Identities=36% Similarity=0.821 Sum_probs=8.3
Q ss_pred ccccccCCchH
Q psy964 74 RLGIEGYPTYK 84 (154)
Q Consensus 74 rlgiEg~pt~k 84 (154)
.+.|+||||.+
T Consensus 77 ~~~I~~yPTi~ 87 (122)
T d1g7ea_ 77 KLDKESYPVFY 87 (122)
T ss_dssp TCSSSSCEEEE
T ss_pred cccccCCCeEE
Confidence 35689999973
No 10
>d2c0ga2 c.47.1.7 (A:1024-1145) Windbeutel, N-terminal domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=16.40 E-value=20 Score=22.80 Aligned_cols=9 Identities=11% Similarity=0.490 Sum_probs=6.6
Q ss_pred cccccCCch
Q psy964 75 LGIEGYPTY 83 (154)
Q Consensus 75 lgiEg~pt~ 83 (154)
+.++||||.
T Consensus 77 i~~~~~PTi 85 (122)
T d2c0ga2 77 VDDKNFPSI 85 (122)
T ss_dssp CCTTSCCEE
T ss_pred cccCCCCcE
Confidence 344789996
Done!