Your job contains 1 sequence.
>psy9642
MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA
ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK
TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ
FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGYKKYLLIYLIVY
GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT
KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD
GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET
GSSKPGGRVMEVENSIY
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy9642
(437 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-7660 - symbol:cops3 "COP9 constituti... 1123 7.3e-114 1
UNIPROTKB|A6H7B5 - symbol:COPS3 "COP9 signalosome complex... 1119 1.9e-113 1
UNIPROTKB|E2RD70 - symbol:COPS3 "Uncharacterized protein"... 1119 1.9e-113 1
UNIPROTKB|Q9UNS2 - symbol:COPS3 "COP9 signalosome complex... 1118 2.5e-113 1
MGI|MGI:1349409 - symbol:Cops3 "COP9 (constitutive photom... 1118 2.5e-113 1
RGD|1303002 - symbol:Cops3 "COP9 signalosome subunit 3" s... 1117 3.2e-113 1
UNIPROTKB|Q5ZJF1 - symbol:COPS3 "COP9 signalosome complex... 1114 6.6e-113 1
UNIPROTKB|F1SB16 - symbol:COPS3 "Uncharacterized protein"... 1104 7.6e-112 1
FB|FBgn0027055 - symbol:CSN3 "COP9 complex homolog subuni... 1003 3.8e-101 1
DICTYBASE|DDB_G0291848 - symbol:csn3 "proteasome componen... 604 7.3e-59 1
TAIR|locus:2145638 - symbol:COP13 "AT5G14250" species:370... 555 1.1e-53 1
UNIPROTKB|J3QKR0 - symbol:COPS3 "COP9 signalosome complex... 265 1.2e-22 1
ASPGD|ASPL0000007455 - symbol:csnC species:162425 "Emeric... 204 6.8e-22 2
WB|WBGene00000815 - symbol:csn-3 species:6239 "Caenorhabd... 173 9.6e-12 2
UNIPROTKB|G4NAX6 - symbol:MGG_00687 "Uncharacterized prot... 115 3.3e-11 3
UNIPROTKB|G4NDR0 - symbol:MGG_00884 "26S proteasome non-A... 135 1.0e-05 1
DICTYBASE|DDB_G0288621 - symbol:psmD3 "26S proteasome non... 134 1.1e-05 1
UNIPROTKB|B4DT72 - symbol:PSMD3 "26S proteasome non-ATPas... 122 0.00013 1
ZFIN|ZDB-GENE-040426-1444 - symbol:psmd3 "proteasome (pro... 123 0.00018 1
MGI|MGI:98858 - symbol:Psmd3 "proteasome (prosome, macrop... 122 0.00025 1
RGD|1311470 - symbol:Psmd3 "proteasome (prosome, macropai... 122 0.00025 1
UNIPROTKB|Q2KJ46 - symbol:PSMD3 "26S proteasome non-ATPas... 122 0.00025 1
UNIPROTKB|E2QUY7 - symbol:PSMD3 "Uncharacterized protein"... 122 0.00025 1
UNIPROTKB|O43242 - symbol:PSMD3 "26S proteasome non-ATPas... 122 0.00025 1
UNIPROTKB|F1RXA7 - symbol:LOC100512253 "Uncharacterized p... 122 0.00025 1
>ZFIN|ZDB-GENE-030131-7660 [details] [associations]
symbol:cops3 "COP9 constitutive photomorphogenic
homolog subunit 3" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 ZFIN:ZDB-GENE-030131-7660 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180
HOGENOM:HOG000030451 KO:K12177 CTD:8533 HOVERGEN:HBG051135
EMBL:BC045415 EMBL:BC064288 IPI:IPI00484908 RefSeq:NP_955979.1
UniGene:Dr.120979 ProteinModelPortal:Q6P2U9 PRIDE:Q6P2U9
GeneID:335720 KEGG:dre:335720 InParanoid:Q6P2U9 NextBio:20810996
Bgee:Q6P2U9 Uniprot:Q6P2U9
Length = 423
Score = 1123 (400.4 bits), Expect = 7.3e-114, P = 7.3e-114
Identities = 220/422 (52%), Positives = 298/422 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVNNVRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNNVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDIQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ + + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPNIPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q + +QLTS+H+DLCQLCLLA+ FKPA+ FL++D+ I E
Sbjct: 116 QPLRGISILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPAVPFLELDMMDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D K+FL Y+YYGGMIY LKN+ERALYFFE ITTPA+AVSHIMLE ++
Sbjct: 176 YDAKHFLCYYYYGGMIYTGLKNFERALYFFEQAITTPAMAVSHIMLEAYKKYILVSLILH 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L +Y NN EL+ L+ K+++ F+RD NTGL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQIYATNNPAELRALVNKHSETFTRDNNTGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EIYA+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIYASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP +I+ + C+ LD K ++M++EI VNP +V+K+ +++
Sbjct: 356 GMVCFHDNPEKYNNPAMLHKIDQEMLKCIELDEKLKSMDQEITVNPQFVQKSMGTQEDDV 415
Query: 421 GS 422
GS
Sbjct: 416 GS 417
>UNIPROTKB|A6H7B5 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0010388 "cullin deneddylation" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF EMBL:BC146183
IPI:IPI00695994 RefSeq:NP_001092374.1 UniGene:Bt.3232
ProteinModelPortal:A6H7B5 STRING:A6H7B5 PRIDE:A6H7B5
Ensembl:ENSBTAT00000025255 GeneID:507932 KEGG:bta:507932 CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 InParanoid:A6H7B5
OrthoDB:EOG49KFQJ NextBio:20868278 Uniprot:A6H7B5
Length = 423
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 220/425 (51%), Positives = 301/425 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSVPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q + +QLTS+H+DLCQLCLLA+ FKPAL +LDVD+ I E
Sbjct: 116 QPLRGIGVLRQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMVDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D K+FL Y+YYGGM+Y LKN+ERALYF+E ITTPA+AVSHIMLE +
Sbjct: 176 YDAKHFLCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILL 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L VY+ NN +EL+ L+ K++++F+RD N GL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRSLVTKHSEIFTRDNNMGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EI+A+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP I+ + C+ LD + +AM++EI VNP +V+K+ ++++
Sbjct: 356 GMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDS 415
Query: 421 GSSKP 425
G+ KP
Sbjct: 416 GN-KP 419
>UNIPROTKB|E2RD70 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:AAEX03003732 RefSeq:XP_864801.2
ProteinModelPortal:E2RD70 Ensembl:ENSCAFT00000029331 GeneID:479528
KEGG:cfa:479528 NextBio:20854700 Uniprot:E2RD70
Length = 423
Score = 1119 (399.0 bits), Expect = 1.9e-113, P = 1.9e-113
Identities = 221/425 (52%), Positives = 301/425 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSVPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q + +QLTS+H+DLCQLCLLA+ FKPAL +LDVD+ I E
Sbjct: 116 QPLRGISILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D K+FL Y+YYGGMIY LKN+ERALYF+E ITTPA+AVSHIMLE +
Sbjct: 176 YDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILL 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L VY+ NN +EL++L+ K+++ F+RD N GL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EI+A+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP I+ + C+ LD + +AM++EI VNP +V+K+ ++++
Sbjct: 356 GMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDS 415
Query: 421 GSSKP 425
G+ KP
Sbjct: 416 GN-KP 419
>UNIPROTKB|Q9UNS2 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome" evidence=IDA] [GO:0010388
"cullin deneddylation" evidence=IDA] [GO:0009416 "response to light
stimulus" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 GO:GO:0007165 GO:GO:0001701
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009416 EMBL:CH471196
GO:GO:0008180 CleanEx:HS_CSN3 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF031647 EMBL:AF098109
EMBL:AK312476 EMBL:AK302304 EMBL:AK316400 EMBL:AC055811
EMBL:BC001891 IPI:IPI00025721 RefSeq:NP_001186054.1
RefSeq:NP_003644.2 UniGene:Hs.6076 ProteinModelPortal:Q9UNS2
DIP:DIP-32478N IntAct:Q9UNS2 MINT:MINT-129190 STRING:Q9UNS2
PhosphoSite:Q9UNS2 DMDM:55976621 PaxDb:Q9UNS2 PeptideAtlas:Q9UNS2
PRIDE:Q9UNS2 DNASU:8533 Ensembl:ENST00000268717
Ensembl:ENST00000539941 GeneID:8533 KEGG:hsa:8533 UCSC:uc002grd.3
GeneCards:GC17M017151 HGNC:HGNC:2239 HPA:HPA021997 MIM:604665
neXtProt:NX_Q9UNS2 PharmGKB:PA26755 InParanoid:Q9UNS2
PhylomeDB:Q9UNS2 ChiTaRS:COPS3 GenomeRNAi:8533 NextBio:31960
ArrayExpress:Q9UNS2 Bgee:Q9UNS2 CleanEx:HS_COPS3
Genevestigator:Q9UNS2 GermOnline:ENSG00000141030 Uniprot:Q9UNS2
Length = 423
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 221/425 (52%), Positives = 301/425 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSVPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q + +QLTS+H+DLCQLCLLA+ FKPAL +LDVD+ I E
Sbjct: 116 QPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D K+FL Y+YYGGMIY LKN+ERALYF+E ITTPA+AVSHIMLE +
Sbjct: 176 YDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILL 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L VY+ NN +EL++L+ K+++ F+RD N GL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EI+A+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP I+ + C+ LD + +AM++EI VNP +V+K+ ++++
Sbjct: 356 GMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDS 415
Query: 421 GSSKP 425
G+ KP
Sbjct: 416 GN-KP 419
>MGI|MGI:1349409 [details] [associations]
symbol:Cops3 "COP9 (constitutive photomorphogenic) homolog,
subunit 3 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180
"signalosome" evidence=ISO;IDA] [GO:0010388 "cullin deneddylation"
evidence=ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1349409 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 CleanEx:MM_CSN3 GO:GO:0010388
eggNOG:NOG249849 HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF
CTD:8533 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AF071313
EMBL:BC068179 IPI:IPI00131870 RefSeq:NP_036121.1 UniGene:Mm.40
ProteinModelPortal:O88543 IntAct:O88543 STRING:O88543
PhosphoSite:O88543 PaxDb:O88543 PRIDE:O88543
Ensembl:ENSMUST00000019517 GeneID:26572 KEGG:mmu:26572
InParanoid:O88543 NextBio:304659 Bgee:O88543 Genevestigator:O88543
GermOnline:ENSMUSG00000019373 Uniprot:O88543
Length = 423
Score = 1118 (398.6 bits), Expect = 2.5e-113, P = 2.5e-113
Identities = 221/425 (52%), Positives = 301/425 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSVPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q + +QLTS+H+DLCQLCLLA+ FKPAL +LDVD+ I E
Sbjct: 116 QPLRGIGILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D K+FL Y+YYGGMIY LKN+ERALYF+E ITTPA+AVSHIMLE +
Sbjct: 176 YDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILL 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L VY+ NN +EL++L+ K+++ F+RD N GL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVSKHSETFTRDNNMGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EI+A+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP I+ + C+ LD + +AM++EI VNP +V+K+ ++++
Sbjct: 356 GMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDS 415
Query: 421 GSSKP 425
G+ KP
Sbjct: 416 GN-KP 419
>RGD|1303002 [details] [associations]
symbol:Cops3 "COP9 signalosome subunit 3" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation"
evidence=IEA;ISO] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
RGD:1303002 GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849
HOGENOM:HOG000030451 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ
EMBL:BC079143 IPI:IPI00200828 RefSeq:NP_001004200.1 UniGene:Rn.3963
ProteinModelPortal:Q68FW9 STRING:Q68FW9 PhosphoSite:Q68FW9
PRIDE:Q68FW9 Ensembl:ENSRNOT00000004438 GeneID:287367
KEGG:rno:287367 UCSC:RGD:1303002 InParanoid:Q68FW9 NextBio:625967
Genevestigator:Q68FW9 Uniprot:Q68FW9
Length = 423
Score = 1117 (398.3 bits), Expect = 3.2e-113, P = 3.2e-113
Identities = 221/425 (52%), Positives = 301/425 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSVPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q + +QLTS+H+DLCQLCLLA+ FKPAL +LDVD+ I E
Sbjct: 116 QPLRGIGILKQAIDKMQMNTNQLTSVHADLCQLCLLAKCFKPALPYLDVDMMDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D K+FL Y+YYGGMIY LKN+ERALYF+E ITTPA+AVSHIMLE +
Sbjct: 176 YDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILL 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L VY+ NN +EL++L+ K+++ F+RD N GL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EI+A+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP I+ + C+ LD + +AM++EI VNP +V+K+ ++++
Sbjct: 356 GMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDS 415
Query: 421 GSSKP 425
G+ KP
Sbjct: 416 GN-KP 419
>UNIPROTKB|Q5ZJF1 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9031 "Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 eggNOG:NOG249849 HOGENOM:HOG000030451
KO:K12177 OMA:DRALYFF CTD:8533 GeneTree:ENSGT00490000043408
HOVERGEN:HBG051135 OrthoDB:EOG49KFQJ EMBL:AJ720483 IPI:IPI00599251
RefSeq:NP_001006163.1 UniGene:Gga.31710 ProteinModelPortal:Q5ZJF1
STRING:Q5ZJF1 PRIDE:Q5ZJF1 Ensembl:ENSGALT00000007721 GeneID:416504
KEGG:gga:416504 InParanoid:Q5ZJF1 NextBio:20819948 Uniprot:Q5ZJF1
Length = 423
Score = 1114 (397.2 bits), Expect = 6.6e-113, P = 6.6e-113
Identities = 220/425 (51%), Positives = 300/425 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSIPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q + +QLTS+H+DLCQLCLLA+ FKPAL +LDVD+ I E
Sbjct: 116 QPLRGISILRQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D K+FL Y+YYGGMIY LKN+ERALYF+E ITTPA+AVSHIMLE +
Sbjct: 176 YDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILL 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L VY+ N +EL++L+ K+++ F+RD N GL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNKPSELRNLVNKHSETFTRDNNMGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EI+A+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP I+ + C+ LD + +AM++EI VNP +V+K+ ++++
Sbjct: 356 GMVCFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDS 415
Query: 421 GSSKP 425
G+ KP
Sbjct: 416 GT-KP 419
>UNIPROTKB|F1SB16 [details] [associations]
symbol:COPS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005737 GO:GO:0001701 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 KO:K12177 OMA:DRALYFF CTD:8533
GeneTree:ENSGT00490000043408 EMBL:CU927962 RefSeq:NP_001231078.1
UniGene:Ssc.11099 Ensembl:ENSSSCT00000019646 GeneID:100512312
KEGG:ssc:100512312 Uniprot:F1SB16
Length = 423
Score = 1104 (393.7 bits), Expect = 7.6e-112, P = 7.6e-112
Identities = 219/425 (51%), Positives = 299/425 (70%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S+ + E LFSQ Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSAPDF-----ETLFSQAQLFISACNGEHIRYATDTFAGLCHQLTNALVERK 115
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ 180
P RGI +++ AI K+Q S +QLTS+H+DLCQLCLLA+ FKPAL +LDVD+ I E
Sbjct: 116 QPLRGIGVLKQAIDKMQMSANQLTSVHADLCQLCLLAKCFKPALPYLDVDMVDICKENGA 175
Query: 181 FDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVY 240
+D ++FL Y+YYGGM+Y LKN+ERALYF+E ITTPA+AVSHIMLE +
Sbjct: 176 YDARHFLCYYYYGGMVYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILL 235
Query: 241 GKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
GK LPK SQ + R+IKPLS Y +L VY+ N+ +EL+ L+ K+++ F RD N GL
Sbjct: 236 GKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNSPSELRTLVNKHSETFVRDSNMGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ ++SLYK NI+RLTKTFLTLSL D+ASRVQL P +AE Y+L MI EI+A+IN+KD
Sbjct: 296 KQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEET 420
GMV F+DNP+++NNP I+ + C+ LD + +AM++EI VNP +V+K+ ++++
Sbjct: 356 GMVSFHDNPEKYNNPAMLQSIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDS 415
Query: 421 GSSKP 425
G+ KP
Sbjct: 416 GN-KP 419
>FB|FBgn0027055 [details] [associations]
symbol:CSN3 "COP9 complex homolog subunit 3" species:7227
"Drosophila melanogaster" [GO:0008180 "signalosome"
evidence=ISS;NAS] [GO:0050821 "protein stabilization" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0007275 GO:GO:0005737
GO:GO:0007095 GO:GO:0050821 EMBL:AE014296 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
CTD:1448 GO:GO:0000338 GO:GO:0019781 eggNOG:NOG249849 KO:K12177
OMA:DRALYFF GeneTree:ENSGT00490000043408 EMBL:AF129081
EMBL:AY071575 RefSeq:NP_524190.2 UniGene:Dm.5855
ProteinModelPortal:Q8SYG2 IntAct:Q8SYG2 MINT:MINT-278777
STRING:Q8SYG2 PaxDb:Q8SYG2 EnsemblMetazoa:FBtr0078269 GeneID:40308
KEGG:dme:Dmel_CG18332 FlyBase:FBgn0027055 InParanoid:Q8SYG2
OrthoDB:EOG4JQ2CW PhylomeDB:Q8SYG2 GenomeRNAi:40308 NextBio:818125
Bgee:Q8SYG2 GermOnline:CG18332 Uniprot:Q8SYG2
Length = 445
Score = 1003 (358.1 bits), Expect = 3.8e-101, P = 3.8e-101
Identities = 214/440 (48%), Positives = 291/440 (66%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
M +ALE +VN VR LSA GS+REL E + +S+ +L + LDNVLETL+ QHSLG+L
Sbjct: 1 MGSALENYVNQVRTLSASGSYRELAEELPESLSLLARNWSILDNVLETLDMQQHSLGVLY 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L AKL S++T + +L +++F+ N +Q+R+A + E H +T+ V+
Sbjct: 61 VLLAKL---HSASTANPEPVQLIQLMRDFVQRNNNEQLRYAVCAFYETCHLFTEFVVQKN 117
Query: 121 TPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDIT---TIANE 177
GI +I AI +I+ ++QLT +H+DLC L L A+NF L +LD DIT T+A E
Sbjct: 118 LSILGIRIISRAIDQIRQLETQLTPIHADLCLLSLKAKNFSVVLPYLDADITDISTVAAE 177
Query: 178 ------------GPQFDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIM 225
D KYFL YFYYGGMIY A+KNYERALYFFEV ITTPA+A+SHIM
Sbjct: 178 CKTQQQQQSQHADANNDAKYFLLYFYYGGMIYTAVKNYERALYFFEVCITTPAMAMSHIM 237
Query: 226 LEGXXXXXXXXXXVYGKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLL 285
LE V GK +PKN +Q I R++KP++ Y DLV+VY N++S EL+ ++L
Sbjct: 238 LEAYKKFLMVSLIVEGKIAYIPKN-TQVIGRFMKPMANHYHDLVNVYANSSSEELRIIIL 296
Query: 286 KYADVFSRDENTGLTKQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILK 345
KY++ F+RD N GL KQ+ SLYK NI+RLTKTFLTLSL+DVASRVQL + V+AE YIL
Sbjct: 297 KYSEAFTRDNNMGLAKQVATSLYKRNIQRLTKTFLTLSLSDVASRVQLASAVEAERYILN 356
Query: 346 MISQNEIYATINKKDGMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVN 405
MI EIYA+IN+KDGMV+F D+P+++N+P F +++NI + + MEEEI++N
Sbjct: 357 MIKSGEIYASINQKDGMVLFKDDPEKYNSPEMFLNVQNNITHVLDQVRQINKMEEEIILN 416
Query: 406 PLYVKKAASPSDEETGSSKP 425
P+YVKKA D++ S P
Sbjct: 417 PMYVKKALGSQDDDLTSQHP 436
>DICTYBASE|DDB_G0291848 [details] [associations]
symbol:csn3 "proteasome component region PCI (PINT)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
dictyBase:DDB_G0291848 GO:GO:0005737 GenomeReviews:CM000155_GR
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0008180 eggNOG:NOG249849
KO:K12177 OMA:DRALYFF EMBL:DQ309431 EMBL:AAFI02000185
RefSeq:XP_629934.1 ProteinModelPortal:Q54E53 STRING:Q54E53
EnsemblProtists:DDB0233101 GeneID:8628339 KEGG:ddi:DDB_G0291848
ProtClustDB:CLSZ2497092 Uniprot:Q54E53
Length = 418
Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
Identities = 135/379 (35%), Positives = 213/379 (56%)
Query: 40 QH--LDNVLETLETFQHSLGILAILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQ 97
QH LDN+L L+ HSLG L +L AK S+ G + Q F CN +Q
Sbjct: 29 QHVSLDNILGALDVRNHSLGQLLVLKAK-----GSDQGKN-RSVFIDQCNNFFRNCNVEQ 82
Query: 98 IRHAGDLYAELSHQYTKTVMDLKTPQRGIPLIQTAIKKIQTSD--SQLTSLHSDLCQLCL 155
+R A ++LS YT+ + +LK P RG+ +++ A+ + + + LT +H+D QLC+
Sbjct: 83 VRLAPAQLSQLSKFYTEALYELKQPIRGVAVLKDALNILSDNKPTTTLTPIHTDFLQLCI 142
Query: 156 LAQNFKPALEFLDVDITTIANEGPQFDTKYFLQYFYYGGMIYLALKNYERALYFFEVIIT 215
L++ + AL ++ +IT I E K L YFYY G+I+ A K Y++A+ F+ +IT
Sbjct: 143 LSKCYHQALPLIESNITHINPEQSSIAIKDILCYFYYSGIIFTAFKKYKKAIEAFKFVIT 202
Query: 216 TPALAVSHIMLEGXXXXXXXXXXVYGKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNN 275
PA A+S I +E +G + PK + R IK +PY + V ++N
Sbjct: 203 APASALSAITVEAYKKYLIVYLIQFGSVQHFPKCTPAVVQRNIKSHCKPYTEFVQSFSNG 262
Query: 276 NSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGT 335
N ++ + A+ F +D N GL K + S Y+ NIK+LT+TF+TLS+ D+A +V L
Sbjct: 263 NINDIMNKASSGAEFFQKDSNWGLVKLSIKSTYRRNIKKLTQTFMTLSINDIAEKVSL-P 321
Query: 336 PVQAEIYILKMISQNEIYATINKKDGMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKF 395
+AE ++LKMI + EI+ATIN+KDGMV F++ + F+ P ++ NI + L+ K
Sbjct: 322 KAKAEQFVLKMIEEGEIFATINQKDGMVTFDECFEDFSGPTILNDLDRNINNIVGLESKI 381
Query: 396 QAMEEEILVNPLYVKKAAS 414
+ M+E+I ++ Y+KK AS
Sbjct: 382 KEMDEKISLSNNYLKKLAS 400
>TAIR|locus:2145638 [details] [associations]
symbol:COP13 "AT5G14250" species:3702 "Arabidopsis
thaliana" [GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006396 "RNA processing" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0016571 "histone methylation"
evidence=RCA] [GO:0016579 "protein deubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051604
"protein maturation" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0007275 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000085 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0009585 EMBL:AL163817 GO:GO:0008180
GO:GO:0010388 EMBL:AF361759 EMBL:AF361760 EMBL:AF395059
EMBL:AF419585 EMBL:AY113041 EMBL:AY084910 IPI:IPI00524958
PIR:T48598 RefSeq:NP_568296.1 UniGene:At.5163
ProteinModelPortal:Q8W575 SMR:Q8W575 IntAct:Q8W575 STRING:Q8W575
PaxDb:Q8W575 PRIDE:Q8W575 DNASU:831275 EnsemblPlants:AT5G14250.1
GeneID:831275 KEGG:ath:AT5G14250 TAIR:At5g14250 eggNOG:NOG249849
HOGENOM:HOG000030451 InParanoid:Q8W575 KO:K12177 OMA:DRALYFF
PhylomeDB:Q8W575 ProtClustDB:CLSN2689667 Genevestigator:Q8W575
Uniprot:Q8W575
Length = 429
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 142/411 (34%), Positives = 224/411 (54%)
Query: 4 ALEQFVNNVRQLSAQGS-FRELTEIIQKSMDVL-TKYGQHLDNVLETLETFQHSLGILAI 61
++E + +++ LS L ++++ + D L + G + + L+ L+ +HSLG L
Sbjct: 7 SVEAVITSIQGLSGSPEDLSALHDLLRGAQDSLRAEPGVNF-STLDQLDASKHSLGYLYF 65
Query: 62 LSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLKT 121
L LT S + Y+ + I F+N C+ QIR A + L V+ L
Sbjct: 66 LEV-LTCGPVSKEKAAYEIPI---IARFINSCDAGQIRLASYKFVSLCKILKDHVIALGD 121
Query: 122 PQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQF 181
P RG+ + A++K+Q S +LT+LH D+ QLCL A+++K L DI I + P+
Sbjct: 122 PLRGVGPLLNAVQKLQVSSKRLTALHPDVLQLCLQAKSYKSGFSILSDDIVEI--DQPR- 178
Query: 182 DTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVYG 241
+FL Y YYGGMI + LK +++AL ++T P V+ I LE G
Sbjct: 179 --DFFL-YSYYGGMICIGLKRFQKALELLYNVVTAPMHQVNAIALEAYKKYILVSLIHNG 235
Query: 242 KAPN-LPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLT 300
+ N LPK S A R K + PY++L + Y + EL+ L++ F D+N GL
Sbjct: 236 QFTNTLPKCASTAAQRSFKNYTGPYIELGNCYNDGKIGELEALVVARNAEFEEDKNLGLV 295
Query: 301 KQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKD 360
KQ V+SLYK NI RLT+ +LTLSL D+A+ VQLG +AE+++L+MI +I+A IN+KD
Sbjct: 296 KQAVSSLYKRNILRLTQKYLTLSLQDIANMVQLGNAKEAEMHVLQMIQDGQIHALINQKD 355
Query: 361 GMVVFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPLYVKK 411
GMV F ++P+++ + ++S I+ + L AM+E + +PLY+ K
Sbjct: 356 GMVRFLEDPEQYKSSEMIEIMDSVIQRTIGLSKNLLAMDESLSCDPLYLGK 406
>UNIPROTKB|J3QKR0 [details] [associations]
symbol:COPS3 "COP9 signalosome complex subunit 3"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
EMBL:AC055811 HGNC:HGNC:2239 ChiTaRS:COPS3 Ensembl:ENST00000477299
Uniprot:J3QKR0
Length = 116
Score = 265 (98.3 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 58/120 (48%), Positives = 80/120 (66%)
Query: 1 MATALEQFVNNVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILA 60
MA+ALEQFVN+VRQLSAQG +L E+I KS ++L K HLD VL L+ +HSLG+LA
Sbjct: 1 MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLA 60
Query: 61 ILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLK 120
+L K ++ S + E LFSQ+Q F++ CN + IR+A D +A L HQ T +++ K
Sbjct: 61 VLFVKFSMPSVPDF-----ETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK 115
>ASPGD|ASPL0000007455 [details] [associations]
symbol:csnC species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IPI] [GO:0003674 "molecular_function"
evidence=ND] GO:GO:0005737 EMBL:BN001301 EMBL:AACD01000100
GO:GO:0008180 eggNOG:NOG249849 KO:K12177 RefSeq:XP_663402.1
STRING:Q5B0Y2 EnsemblFungi:CADANIAT00007250 GeneID:2870947
KEGG:ani:AN5798.2 HOGENOM:HOG000213404 OMA:YATINQR
OrthoDB:EOG42859W Uniprot:Q5B0Y2
Length = 496
Score = 204 (76.9 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 56/224 (25%), Positives = 112/224 (50%)
Query: 187 LQYFYYGGMIYLALKNYERALYFFEVIITTP-ALAVSHIMLEGXXXXXXXXXXVYGKAPN 245
LQ++ Y GM+Y+ALK +++A + ++I+ P A +VS IM+E +GK +
Sbjct: 225 LQFYMYSGMVYMALKKWDQASHCLGIVISAPTANSVSKIMVEAYKKWVLANLLGHGKLFS 284
Query: 246 LPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVA 305
+P V+ + R + LS+PY+ L + + L+ + ++ D+N+GL Q+
Sbjct: 285 VPNLVAPHVTRVYQSLSKPYISLAEAFEKRDFQRLRTEISLGQTIWRADKNSGLVYQVFE 344
Query: 306 SLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEI--YILKMISQNEIYATINKKDGMV 363
+ K I +L KTF L++ DV R + +I +++ ++ E+ A ++ G
Sbjct: 345 AYDKFLIIKLGKTFSALTMPDVLQRASSCSKGSRDIEEFVVSLVMTKELRAKLSHSPG-- 402
Query: 364 VFNDNPQRFNNPLTFAQIESNIRACMHLDGKFQAMEEEILVNPL 407
N+ PL+ +S+ H+ +F+ +++E +N +
Sbjct: 403 --NETTTMLRFPLSS---QSHALREEHI--RFRLIQKEAALNTI 439
Score = 122 (48.0 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 36/132 (27%), Positives = 64/132 (48%)
Query: 42 LDNVLETLETFQHSLGILAILSAKLTLLSSSNT-G--SEYQE--ELFSQIQEFLNMCNPD 96
++ LE + HSL L +L ++ L G ++ Q L++Q +FL +P
Sbjct: 49 INGYLEAISPAVHSLSYLYLLRIRIQQLQEKTAVGVPNDLQPGGTLWNQTVKFLRSFDPI 108
Query: 97 QIRHAGDLYAELSHQYTKTVMDLKTPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLL 156
QIR+ G + EL + + P + +I+ A++++ T+ TSLH L +L LL
Sbjct: 109 QIRYVGHEWRELVDSVANAALSVSKPILAVKMIRDALERLNTA-GVFTSLHLMLVKLALL 167
Query: 157 AQNFKPALEFLD 168
+ ++ L LD
Sbjct: 168 SSSYTYVLPVLD 179
>WB|WBGene00000815 [details] [associations]
symbol:csn-3 species:6239 "Caenorhabditis elegans"
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP;IDA]
[GO:0040001 "establishment of mitotic spindle localization"
evidence=IMP] [GO:0008180 "signalosome" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000717 Pfam:PF01399
GO:GO:0007275 GO:GO:0005737 GO:GO:0030154 GO:GO:0048477
GO:GO:0000910 GO:GO:0006511 GO:GO:0008180 GO:GO:0040001
eggNOG:NOG249849 KO:K12177 GeneTree:ENSGT00490000043408
EMBL:FO081257 RefSeq:NP_499878.3 ProteinModelPortal:Q9N425
IntAct:Q9N425 MINT:MINT-1115499 STRING:Q9N425 PaxDb:Q9N425
EnsemblMetazoa:Y38C1AA.2 GeneID:176834 KEGG:cel:CELE_Y38C1AA.2
UCSC:Y38C1AA.2 CTD:176834 WormBase:Y38C1AA.2 InParanoid:Q9N425
OMA:YASVEPF NextBio:894218 Uniprot:Q9N425
Length = 501
Score = 173 (66.0 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 54/219 (24%), Positives = 96/219 (43%)
Query: 179 PQFDTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXX 238
P KY L Y Y G I + LK +E AL+ E+ + PA +V L+
Sbjct: 252 PHLHPKYVLDYLYNGACILIELKRFEDALFLLEICVGMPAFSVQDQHLDSFKKYVLISLI 311
Query: 239 VYGKAPNLPKNVSQAICRYIKPLSQPYLDLVSVY---TNNNSTELQHLLLKYADVFSRDE 295
+ GK ++ +N ++ R+ K S Y + ++N + ++ L+ D +D
Sbjct: 312 LKGKV-DVTENGDKSAIRHFKTKSPEYKQFSEIRFSRSSNTHSAVESLVKSAKDRLRKDG 370
Query: 296 NTGLTKQIVASLYKNNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYAT 355
NT + K +V + K I LT+ F ++ ++++ L + Q I +++ + I
Sbjct: 371 NTEIAKYLVVEMKKKTIMSLTRMFTSIRISEIEELAFLKSRDQVTELIGQLVEEQRITVR 430
Query: 356 INKKDGMVVF--NDNPQRFNNPLTFAQIESNIRACMHLD 392
I DG +VF +P N +E+ IR HL+
Sbjct: 431 I---DGDMVFWTELSPVPSKN-----DVENKIRIVDHLN 461
Score = 59 (25.8 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 37/179 (20%), Positives = 75/179 (41%)
Query: 6 EQFVN-NVRQLSAQGSFRELTEIIQKSMDVLTKYGQHLDNVLETLETFQHSLGILAILSA 64
E+ V+ NV +L+A G R+ E+ +K + + + H + + G+ +A
Sbjct: 42 EKHVSENVGELAA-GIVRKNKELFEKKSNDVEAFLLHCSPNVGSAAMVAAIKGMFDTSAA 100
Query: 65 KLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLKT-PQ 123
K ++ TG++ EL + + N ++ ++ L ++ K P+
Sbjct: 101 K-----NNETGTDRAVELLNHYVDENNFVG-GHLKLVPEIIFPLLRDVGLYCLEKKNKPE 154
Query: 124 RGIPLIQTAIKKI-----QTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANE 177
G +I A+ + + + LTS H L L +++ F+D+ + IANE
Sbjct: 155 IGQRIIMKALGSMFPRNGSNAPNVLTSAHGVLFACALETKDYASVEPFIDLHVDEIANE 213
>UNIPROTKB|G4NAX6 [details] [associations]
symbol:MGG_00687 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CM001235 KO:K12177 RefSeq:XP_003718322.1
EnsemblFungi:MGG_00687T0 GeneID:2675030 KEGG:mgr:MGG_00687
Uniprot:G4NAX6
Length = 497
Score = 115 (45.5 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 40/169 (23%), Positives = 79/169 (46%)
Query: 187 LQYFYYGGMIYLALKNYERALYFFEVIITTPAL--AVSHIMLEGXXXXXXXXXXVYGK-- 242
L+Y + G++Y A +++ A F + P+ VS +MLE G+
Sbjct: 218 LEYDWLVGLLYCAARDWPAAQAAFARTASHPSRDSGVSKVMLEAFKKWVLVSLLAEGRIT 277
Query: 243 APN-LPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTK 301
P +SQA R +++PY + + + ++ L+ + + F+ D N GL
Sbjct: 278 TPGGFAPYISQASARTFGIMARPYAAVAKRFESADADALRLAVEVSSQQFAEDGNEGLVA 337
Query: 302 QIVASLYKNNIKRLTKTFLTLSLADVASRVQ---LGTPVQAEIYILKMI 347
+++ S K I RL + + +SLA++ ++ + G PV +E + ++I
Sbjct: 338 EVLESHQKWQIVRLREVYSKVSLAEINAKTKSAVTGAPVGSEEDMTQLI 386
Score = 114 (45.2 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 34/123 (27%), Positives = 57/123 (46%)
Query: 43 DNVLETLETFQHSLGILAILSAKLTLLSSSNTGSEYQEELFSQIQEFLNMCNPDQIRHAG 102
DN + L+ ++ L+ L LL +EY +E ++ F +P QIR+ G
Sbjct: 48 DNAYKLLDLLNPAINSLSYLYLLAALLPQGTKNAEYDKEFAERVILFFRRFDPRQIRYMG 107
Query: 103 DLYAEL-SHQYTKTVMDLKTPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFK 161
+++L S + VM P +P++ A+ ++ S S LTS H L +L +
Sbjct: 108 VAFSDLFSATGRRNVMP---PTIAVPILADALLRLDPSGSVLTSNHIFLMKLAYNSNFIG 164
Query: 162 PAL 164
PAL
Sbjct: 165 PAL 167
Score = 42 (19.8 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 10/55 (18%), Positives = 24/55 (43%)
Query: 380 QIESNIRACMHLDGKFQAMEEEILVNPLYVKKAASPSDEETGSSKPGGRVMEVEN 434
+I ++ L + A +E + + Y++ A E ++ GG ++E+
Sbjct: 433 RIAQSVERIKQLGAVYNATKERLATSREYIRHAVKDQKREK-DNREGGFETQIED 486
>UNIPROTKB|G4NDR0 [details] [associations]
symbol:MGG_00884 "26S proteasome non-ATPase regulatory
subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 EMBL:CM001235
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 KO:K03033
RefSeq:XP_003718082.1 EnsemblFungi:MGG_00884T0 GeneID:2674538
KEGG:mgr:MGG_00884 Uniprot:G4NDR0
Length = 557
Score = 135 (52.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 72/356 (20%), Positives = 136/356 (38%)
Query: 75 GSEYQEELFSQIQEFLNMCNPDQIRHAGDLYAELSHQYTKTVMDLKTPQR-GIPLIQTAI 133
G+E+ + L +I LN D + + +Y S + K +PQ + + T +
Sbjct: 193 GAEFSQHLCERIHS-LNRRTLDSL--SAKVYFYYSLFFEKLAPLPPSPQSPSVSIRPTLL 249
Query: 134 KKIQTSDSQLTSLHSDLCQLCLLAQNFKPALEFLDVDITTIANEGPQ-FDTKYFLQYFYY 192
++T+ + + + + LL +N+ D+ + P+ +Y YY
Sbjct: 250 AALRTAVLR-KDIDTQASVIVLLLRNYLATSHINQADLLVSHTQFPENAANNQVARYLYY 308
Query: 193 GGMIYLALKNYERALYFFEVIITTPALAVSHIMLEGXXXXXXXXXXVYGKAP-NLPKNVS 251
G I Y A E + A S G V ++P
Sbjct: 309 LGRIRAIQLRYTEA---HEHLTAATRKAPSSNCAVGFSQTATKLLLVVELLMGDIP---D 362
Query: 252 QAICRY--IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYK 309
+A R ++ PY LV N + + +AD F +D L ++ ++ +
Sbjct: 363 RATFRQPTLEEALHPYFLLVQAVRVGNLDNFETTIADHADTFRKDGTYTLILRLRQNVIR 422
Query: 310 NNIKRLTKTFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMVVFNDNP 369
I+ ++ ++ +SL D+ R+ LG+ AE + K I I AT++++ G + +
Sbjct: 423 TGIRMMSLSYSRISLRDICIRLHLGSEESAEYIVAKAIRDGVIEATLDREHGYMRSKEVG 482
Query: 370 QRFNNPLTFAQIESNIRACMHL-DGKFQAMEEEILVNPLYVKKAASPSDEETGSSK 424
+ IRAC+ L D +AM + + L +K A + E +K
Sbjct: 483 DVYATREPGEAFHDRIRACLALHDESVKAMRFPMNQHRLELKNAQEAREREREMAK 538
>DICTYBASE|DDB_G0288621 [details] [associations]
symbol:psmD3 "26S proteasome non-ATPase regulatory
subunit 3" species:44689 "Dictyostelium discoideum" [GO:0050790
"regulation of catalytic activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 dictyBase:DDB_G0288621 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GenomeReviews:CM000154_GR EMBL:AAFI02000119 GO:GO:0004175
GO:GO:0000502 GO:GO:0006511 InterPro:IPR000082 GO:GO:0042176
InterPro:IPR013143 SMART:SM00753 eggNOG:NOG251646 KO:K03033
OMA:NQSVKAM RefSeq:XP_001134521.1 STRING:Q1ZXD3 PRIDE:Q1ZXD3
EnsemblProtists:DDB0232980 GeneID:8626718 KEGG:ddi:DDB_G0288621
Uniprot:Q1ZXD3
Length = 504
Score = 134 (52.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 61/312 (19%), Positives = 120/312 (38%)
Query: 105 YAELSHQYTKTVMDLKTPQRGIPLIQTAIKKIQTSDSQLTSLHSDLCQLCLLAQNFKPAL 164
Y LS++ T + ++++ + ++TA + + Q T ++ LL +N+
Sbjct: 181 YYSLSYEMTNNLHEVRSTL--LSALRTATLR-HNDEGQATIIN-------LLLRNYLEYN 230
Query: 165 EFLDVDITTIANEGPQF-DTKYFLQYFYYGGMIYLALKNYERALYFFEVIITTPALAVSH 223
F D + P+ + F +YFYY G I Y + F I +
Sbjct: 231 LFEQADKLLANTQFPESASSNQFARYFYYQGRIRAIQLEYAESFKFLTQAIRKAPQNTAG 290
Query: 224 IMLEGXXXXXXXXXXVYGKAPNLPKNVSQAICRYIKPLSQPYLDLVSVYTNNNSTELQHL 283
+ G+ P SQ + +K +PY L +
Sbjct: 291 GFRRTVYKLLSIVQLLMGEIPER-NTFSQ---KQLKIALKPYFHLTEAVRVGDLGSFNQA 346
Query: 284 LLKYADVFSRDENTGLTKQIVASLYKNNIKRLTKTFLTLSLADVASRVQL-GTPVQAEIY 342
L + +D+F D+ L +++ +++ K +K+L + +S D+ ++++ GT
Sbjct: 347 LEQNSDIFKSDQTFTLVQRLRSNVIKAGLKKLNTAYSRISFNDICTKLKFDGTTQDIMFI 406
Query: 343 ILKMISQNEIYATINKKDGMVVFNDNPQRFNNPLTFAQIESNIRACMHL-DGKFQAMEEE 401
I K I I ATIN + G + +N ++ + I C+ + + +AM
Sbjct: 407 IAKTIKDGVIDATINYEGGYLQSRENIDAYSTQEPLHAFSNRIDICLKIHNDSLKAMRFH 466
Query: 402 ILVNPLYVKKAA 413
+N +K A
Sbjct: 467 PDLNKAETEKIA 478
>UNIPROTKB|B4DT72 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR000717 InterPro:IPR013586 Pfam:PF01399
Pfam:PF08375 SMART:SM00088 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
EMBL:AC090844 InterPro:IPR013143 SMART:SM00753 HOVERGEN:HBG000703
UniGene:Hs.12970 HGNC:HGNC:9560 ChiTaRS:PSMD3 EMBL:AK300081
IPI:IPI01014869 STRING:B4DT72 Ensembl:ENST00000541736
Uniprot:B4DT72
Length = 356
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 215 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISL 274
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 275 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYV 320
>ZFIN|ZDB-GENE-040426-1444 [details] [associations]
symbol:psmd3 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 3" species:7955 "Danio rerio" [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
ZFIN:ZDB-GENE-040426-1444 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 InterPro:IPR013143 SMART:SM00753 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
EMBL:FP017234 EMBL:BC056598 EMBL:BC066451 IPI:IPI00507046
RefSeq:NP_956866.1 UniGene:Dr.13797 Ensembl:ENSDART00000027158
GeneID:393544 KEGG:dre:393544 InParanoid:Q6NYV1 NextBio:20814565
Uniprot:Q6NYV1
Length = 503
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 322 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISL 381
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 382 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGFV 427
>MGI|MGI:98858 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 MGI:MGI:98858 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790 EMBL:CH466556
Gene3D:1.25.40.10 GO:GO:0042176 EMBL:AL590963 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703
OMA:NQSVKAM OrthoDB:EOG4VHK6D ChiTaRS:PSMD3 EMBL:M25149
EMBL:AK145488 EMBL:AK164593 EMBL:AK165520 EMBL:AK166683
EMBL:AK166714 EMBL:AK167285 EMBL:AK169690 EMBL:BC003197
IPI:IPI00314439 PIR:I49504 RefSeq:NP_033465.1 UniGene:Mm.12194
ProteinModelPortal:P14685 IntAct:P14685 STRING:P14685
PhosphoSite:P14685 PaxDb:P14685 PRIDE:P14685
Ensembl:ENSMUST00000017365 GeneID:22123 KEGG:mmu:22123
InParanoid:Q3TP95 NextBio:301989 Bgee:P14685 Genevestigator:P14685
GermOnline:ENSMUSG00000017221 Uniprot:P14685
Length = 530
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 349 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISL 408
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 409 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYV 454
>RGD|1311470 [details] [associations]
symbol:Psmd3 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 3" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375
SMART:SM00088 RGD:1311470 GO:GO:0030234 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0050790 Gene3D:1.25.40.10 GO:GO:0000502
GO:GO:0042176 EMBL:CH473948 InterPro:IPR013143 SMART:SM00753
eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033 CTD:5709
GeneTree:ENSGT00490000043406 HOVERGEN:HBG000703 OMA:NQSVKAM
OrthoDB:EOG4VHK6D EMBL:BC085881 IPI:IPI00370009
RefSeq:NP_001008282.1 UniGene:Rn.101332 IntAct:Q5U2S7 STRING:Q5U2S7
Ensembl:ENSRNOT00000039836 GeneID:287670 KEGG:rno:287670
UCSC:RGD:1311470 InParanoid:Q5U2S7 NextBio:626775
Genevestigator:Q5U2S7 Uniprot:Q5U2S7
Length = 530
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 349 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQTDGTYTLIIRLRHNVIKTGVRMISL 408
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 409 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYV 454
>UNIPROTKB|Q2KJ46 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909 KO:K03033
EMBL:BC105526 IPI:IPI00707518 RefSeq:NP_001039365.1
UniGene:Bt.51586 ProteinModelPortal:Q2KJ46 STRING:Q2KJ46
PRIDE:Q2KJ46 Ensembl:ENSBTAT00000028608 GeneID:504937
KEGG:bta:504937 CTD:5709 GeneTree:ENSGT00490000043406
HOVERGEN:HBG000703 InParanoid:Q2KJ46 OMA:NQSVKAM OrthoDB:EOG4VHK6D
NextBio:20866898 Uniprot:Q2KJ46
Length = 534
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 353 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISL 412
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 413 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYV 458
>UNIPROTKB|E2QUY7 [details] [associations]
symbol:PSMD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
InterPro:IPR000717 InterPro:IPR011990 InterPro:IPR013586
Pfam:PF01399 Pfam:PF08375 SMART:SM00088 GO:GO:0030234
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
Gene3D:1.25.40.10 GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143
SMART:SM00753 KO:K03033 CTD:5709 GeneTree:ENSGT00490000043406
OMA:NQSVKAM EMBL:AAEX03006469 RefSeq:XP_548138.2
Ensembl:ENSCAFT00000025807 GeneID:491018 KEGG:cfa:491018
Uniprot:E2QUY7
Length = 534
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 353 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISL 412
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 413 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYV 458
>UNIPROTKB|O43242 [details] [associations]
symbol:PSMD3 "26S proteasome non-ATPase regulatory subunit
3" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0030234 GO:GO:0005654 GO:GO:0002479
GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 EMBL:CH471152 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 InterPro:IPR013143
SMART:SM00753 GO:GO:0022624 eggNOG:NOG251646 HOGENOM:HOG000193909
KO:K03033 CTD:5709 HOVERGEN:HBG000703 OMA:NQSVKAM OrthoDB:EOG4VHK6D
EMBL:D67025 EMBL:BT007217 EMBL:AK022896 EMBL:BC000074 EMBL:BC004859
EMBL:BC012302 EMBL:BC020518 EMBL:BC025686 IPI:IPI00011603
RefSeq:NP_002800.2 UniGene:Hs.12970 ProteinModelPortal:O43242
DIP:DIP-27571N IntAct:O43242 MINT:MINT-5003834 STRING:O43242
PhosphoSite:O43242 PaxDb:O43242 PeptideAtlas:O43242 PRIDE:O43242
DNASU:5709 Ensembl:ENST00000264639 GeneID:5709 KEGG:hsa:5709
UCSC:uc002htn.1 GeneCards:GC17P038137 HGNC:HGNC:9560 HPA:CAB017038
neXtProt:NX_O43242 PharmGKB:PA38123 InParanoid:O43242
PhylomeDB:O43242 ChiTaRS:PSMD3 GenomeRNAi:5709 NextBio:22182
ArrayExpress:O43242 Bgee:O43242 CleanEx:HS_PSMD3
Genevestigator:O43242 GermOnline:ENSG00000108344 Uniprot:O43242
Length = 534
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 353 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISL 412
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 413 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYV 458
>UNIPROTKB|F1RXA7 [details] [associations]
symbol:LOC100512253 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
InterPro:IPR013586 Pfam:PF01399 Pfam:PF08375 SMART:SM00088
GO:GO:0030234 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 InterPro:IPR013143 SMART:SM00753
GeneTree:ENSGT00490000043406 OMA:NQSVKAM EMBL:CU928026
Ensembl:ENSSSCT00000019042 Uniprot:F1RXA7
Length = 536
Score = 122 (48.0 bits), Expect = 0.00025, P = 0.00025
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 258 IKPLSQPYLDLVSVYTNNNSTELQHLLLKYADVFSRDENTGLTKQIVASLYKNNIKRLTK 317
+K PY L N + +L ++ + F D L ++ ++ K ++ ++
Sbjct: 355 LKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISL 414
Query: 318 TFLTLSLADVASRVQLGTPVQAEIYILKMISQNEIYATINKKDGMV 363
++ +SLAD+A ++QL +P AE + K I I A+IN + G V
Sbjct: 415 SYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYV 460
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 437 427 0.00085 118 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 592 (63 KB)
Total size of DFA: 228 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 37.71u 0.12s 37.83t Elapsed: 00:00:03
Total cpu time: 37.71u 0.12s 37.83t Elapsed: 00:00:03
Start: Thu Aug 15 16:18:45 2013 End: Thu Aug 15 16:18:48 2013