Query psy965
Match_columns 214
No_of_seqs 138 out of 1186
Neff 5.7
Searched_HMMs 29240
Date Sat Aug 17 01:06:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy965.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/965hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eiv_A Deoxyribose-phosphate a 100.0 2E-55 6.8E-60 390.6 17.4 166 40-213 17-190 (297)
2 3r12_A Deoxyribose-phosphate a 100.0 3.5E-53 1.2E-57 371.7 18.5 156 47-213 41-197 (260)
3 3ngj_A Deoxyribose-phosphate a 100.0 4.9E-53 1.7E-57 367.1 18.3 155 48-213 26-181 (239)
4 3ndo_A Deoxyribose-phosphate a 100.0 4.2E-53 1.4E-57 366.0 17.3 155 48-213 12-170 (231)
5 1p1x_A Deoxyribose-phosphate a 100.0 5.5E-52 1.9E-56 364.4 17.1 166 44-213 7-174 (260)
6 3oa3_A Aldolase; structural ge 100.0 3.1E-51 1.1E-55 363.7 18.5 157 46-213 55-212 (288)
7 1vcv_A Probable deoxyribose-ph 100.0 2.5E-51 8.4E-56 353.9 16.7 151 49-213 1-152 (226)
8 2a4a_A Deoxyribose-phosphate a 100.0 3.9E-51 1.3E-55 362.3 15.6 163 46-213 29-196 (281)
9 1ub3_A Aldolase protein; schif 100.0 1.5E-49 5.1E-54 341.4 18.5 155 48-213 2-157 (220)
10 1n7k_A Deoxyribose-phosphate a 100.0 1.7E-46 5.7E-51 325.2 14.2 151 48-213 19-172 (234)
11 1mzh_A Deoxyribose-phosphate a 100.0 1E-36 3.6E-41 260.7 17.4 153 48-213 3-156 (225)
12 1w8s_A FBP aldolase, fructose- 99.9 3.1E-26 1.1E-30 200.1 2.6 142 52-210 22-180 (263)
13 2qjg_A Putative aldolase MJ040 99.5 3.6E-15 1.2E-19 128.6 -0.0 145 49-210 28-187 (273)
14 3glc_A Aldolase LSRF; TIM barr 99.2 4.3E-11 1.5E-15 106.4 8.3 78 128-209 128-209 (295)
15 1qap_A Quinolinic acid phospho 97.9 8.9E-06 3E-10 72.2 4.6 92 98-211 138-237 (296)
16 1yxy_A Putative N-acetylmannos 97.9 3.6E-05 1.2E-09 64.3 7.6 128 59-212 28-164 (234)
17 3c2e_A Nicotinate-nucleotide p 97.3 0.00011 3.8E-09 64.9 3.7 82 117-211 139-228 (294)
18 2jbm_A Nicotinate-nucleotide p 97.3 9.4E-05 3.2E-09 65.5 2.9 82 117-211 137-226 (299)
19 2b7n_A Probable nicotinate-nuc 97.1 0.00011 3.8E-09 64.1 0.7 83 116-211 121-211 (273)
20 1to3_A Putative aldolase YIHT; 96.3 0.0094 3.2E-07 52.6 7.8 138 63-211 46-199 (304)
21 3fok_A Uncharacterized protein 95.5 0.034 1.1E-06 49.6 7.5 145 50-209 46-224 (307)
22 1jub_A Dihydroorotate dehydrog 95.3 0.083 2.8E-06 45.6 9.2 86 122-211 103-194 (311)
23 3b0p_A TRNA-dihydrouridine syn 95.3 0.12 4E-06 46.1 10.3 101 106-211 56-166 (350)
24 3khj_A Inosine-5-monophosphate 94.4 0.27 9.1E-06 44.2 10.4 67 128-209 107-173 (361)
25 2e6f_A Dihydroorotate dehydrog 94.0 0.16 5.5E-06 43.9 7.8 95 107-210 93-196 (314)
26 1ydn_A Hydroxymethylglutaryl-C 93.9 1.4 4.9E-05 37.7 13.7 139 59-212 20-180 (295)
27 3iv3_A Tagatose 1,6-diphosphat 93.2 0.29 9.9E-06 43.9 8.3 134 63-209 51-210 (332)
28 1vrd_A Inosine-5'-monophosphat 92.7 0.43 1.5E-05 44.0 8.9 70 128-211 239-308 (494)
29 3r2g_A Inosine 5'-monophosphat 91.4 0.61 2.1E-05 42.1 8.2 70 128-211 102-171 (361)
30 2ftp_A Hydroxymethylglutaryl-C 90.4 1.3 4.5E-05 38.3 9.1 139 59-212 24-184 (302)
31 3usb_A Inosine-5'-monophosphat 90.4 3.8 0.00013 38.2 12.8 67 128-208 258-324 (511)
32 1ep3_A Dihydroorotate dehydrog 90.3 0.72 2.5E-05 39.3 7.2 91 107-209 98-196 (311)
33 1f76_A Dihydroorotate dehydrog 90.0 2.3 7.8E-05 37.0 10.3 69 136-209 163-245 (336)
34 1rd5_A Tryptophan synthase alp 89.7 1.8 6.1E-05 36.3 9.2 83 119-208 26-124 (262)
35 3hgj_A Chromate reductase; TIM 89.7 1.8 6.2E-05 38.2 9.6 82 129-211 156-261 (349)
36 3ivs_A Homocitrate synthase, m 89.7 1.5 5.2E-05 40.4 9.2 142 50-206 40-197 (423)
37 3f4w_A Putative hexulose 6 pho 88.9 1.1 3.9E-05 35.9 7.0 69 130-212 69-137 (211)
38 2ekc_A AQ_1548, tryptophan syn 88.6 3.2 0.00011 35.2 10.0 83 119-206 25-126 (262)
39 3q58_A N-acetylmannosamine-6-p 88.5 1.9 6.5E-05 36.1 8.4 121 60-208 31-155 (229)
40 3igs_A N-acetylmannosamine-6-p 88.3 1.9 6.6E-05 36.0 8.3 119 62-208 33-155 (232)
41 1f6k_A N-acetylneuraminate lya 88.1 7.8 0.00027 33.3 12.3 91 115-208 13-105 (293)
42 2wkj_A N-acetylneuraminate lya 88.1 4.8 0.00016 34.9 11.0 97 108-208 15-112 (303)
43 3l21_A DHDPS, dihydrodipicolin 88.0 5 0.00017 34.8 11.1 99 107-209 18-117 (304)
44 2cw6_A Hydroxymethylglutaryl-C 87.8 2.6 8.8E-05 36.3 9.0 132 60-206 22-173 (298)
45 1xky_A Dihydrodipicolinate syn 87.4 5.3 0.00018 34.6 10.8 98 107-208 15-113 (301)
46 3cpr_A Dihydrodipicolinate syn 87.4 5.9 0.0002 34.3 11.1 97 108-208 20-117 (304)
47 1y0e_A Putative N-acetylmannos 87.3 5.5 0.00019 32.0 10.3 128 60-210 18-147 (223)
48 2ztj_A Homocitrate synthase; ( 87.0 9.4 0.00032 34.2 12.5 132 60-207 20-162 (382)
49 3ffs_A Inosine-5-monophosphate 86.9 1.4 4.6E-05 40.3 7.0 67 128-209 146-212 (400)
50 3flu_A DHDPS, dihydrodipicolin 86.8 8.5 0.00029 33.1 11.8 91 115-208 17-108 (297)
51 3qze_A DHDPS, dihydrodipicolin 86.6 7.7 0.00026 33.8 11.5 98 107-208 26-124 (314)
52 3b4u_A Dihydrodipicolinate syn 86.4 6.7 0.00023 33.7 10.9 92 115-209 13-105 (294)
53 2v9d_A YAGE; dihydrodipicolini 86.3 5.4 0.00019 35.3 10.5 98 107-208 34-132 (343)
54 4dpp_A DHDPS 2, dihydrodipicol 86.3 8.5 0.00029 34.6 11.8 99 106-208 61-160 (360)
55 1z41_A YQJM, probable NADH-dep 86.1 3.5 0.00012 36.1 9.1 84 127-211 146-251 (338)
56 3a5f_A Dihydrodipicolinate syn 86.0 5.8 0.0002 34.0 10.3 90 115-208 12-102 (291)
57 1nvm_A HOA, 4-hydroxy-2-oxoval 86.0 3.6 0.00012 36.2 9.1 91 106-212 81-174 (345)
58 1eep_A Inosine 5'-monophosphat 85.9 2.6 9E-05 37.8 8.3 68 128-209 155-222 (404)
59 3l5l_A Xenobiotic reductase A; 85.8 1.4 4.6E-05 39.3 6.2 82 129-211 162-268 (363)
60 1ps9_A 2,4-dienoyl-COA reducta 85.8 2.9 9.9E-05 39.7 8.9 86 126-212 142-251 (671)
61 1zfj_A Inosine monophosphate d 85.5 2.4 8.1E-05 38.8 7.9 71 128-212 235-305 (491)
62 3m5v_A DHDPS, dihydrodipicolin 85.5 6.9 0.00024 33.8 10.5 100 108-210 12-111 (301)
63 2yr1_A 3-dehydroquinate dehydr 85.4 12 0.00041 31.7 11.9 89 108-206 20-118 (257)
64 3d0c_A Dihydrodipicolinate syn 85.3 3.8 0.00013 35.7 8.9 98 107-209 14-113 (314)
65 3tak_A DHDPS, dihydrodipicolin 85.3 8.9 0.00031 32.8 11.1 92 115-209 11-103 (291)
66 4avf_A Inosine-5'-monophosphat 85.3 3.7 0.00013 38.1 9.2 68 128-209 231-298 (490)
67 2ehh_A DHDPS, dihydrodipicolin 85.1 6.4 0.00022 33.8 10.1 86 120-208 16-101 (294)
68 3na8_A Putative dihydrodipicol 85.1 8.6 0.00029 33.5 11.0 99 107-209 27-126 (315)
69 1jcn_A Inosine monophosphate d 85.0 3.9 0.00013 37.8 9.2 68 128-210 257-325 (514)
70 2yxg_A DHDPS, dihydrodipicolin 85.0 6.5 0.00022 33.7 10.1 86 120-208 16-101 (289)
71 3dz1_A Dihydrodipicolinate syn 85.0 12 0.0004 32.5 11.8 98 108-210 12-110 (313)
72 2r8w_A AGR_C_1641P; APC7498, d 85.0 5.5 0.00019 35.1 9.8 91 115-208 44-135 (332)
73 3zwt_A Dihydroorotate dehydrog 84.8 19 0.00064 32.2 13.3 78 125-208 163-253 (367)
74 3ble_A Citramalate synthase fr 84.6 2.2 7.5E-05 37.7 7.0 150 50-212 20-194 (337)
75 1mzh_A Deoxyribose-phosphate a 84.6 2.6 8.9E-05 34.9 7.1 85 116-212 123-207 (225)
76 3si9_A DHDPS, dihydrodipicolin 84.4 9.3 0.00032 33.3 10.9 95 110-208 28-123 (315)
77 1o5k_A DHDPS, dihydrodipicolin 84.3 6.3 0.00022 34.1 9.8 87 119-208 27-113 (306)
78 3fkr_A L-2-keto-3-deoxyarabona 84.3 6.4 0.00022 34.2 9.8 97 110-210 14-111 (309)
79 2ojp_A DHDPS, dihydrodipicolin 83.8 7.8 0.00027 33.2 10.0 91 115-208 11-102 (292)
80 3ozy_A Putative mandelate race 83.8 18 0.00063 32.1 12.8 91 108-209 139-229 (389)
81 2gou_A Oxidoreductase, FMN-bin 83.4 2.5 8.6E-05 37.7 6.9 86 125-211 161-272 (365)
82 1ydo_A HMG-COA lyase; TIM-barr 83.2 3.9 0.00013 35.6 7.9 138 61-212 24-182 (307)
83 3gr7_A NADPH dehydrogenase; fl 82.8 5.5 0.00019 35.1 8.8 82 129-211 148-251 (340)
84 4fo4_A Inosine 5'-monophosphat 82.4 3.7 0.00013 36.9 7.7 67 129-209 111-177 (366)
85 2rfg_A Dihydrodipicolinate syn 82.3 4.4 0.00015 35.0 7.9 92 115-209 11-102 (297)
86 4ef8_A Dihydroorotate dehydrog 82.3 6.5 0.00022 35.1 9.2 69 136-208 153-227 (354)
87 3l0g_A Nicotinate-nucleotide p 82.0 2.3 7.8E-05 37.6 5.9 63 128-210 217-280 (300)
88 3s5o_A 4-hydroxy-2-oxoglutarat 81.8 7.2 0.00025 33.8 9.1 91 115-208 24-115 (307)
89 2r14_A Morphinone reductase; H 81.6 2.8 9.7E-05 37.6 6.6 86 125-211 166-277 (377)
90 1xi3_A Thiamine phosphate pyro 81.5 3.5 0.00012 32.7 6.6 81 108-211 15-95 (215)
91 2vc6_A MOSA, dihydrodipicolina 81.4 7.9 0.00027 33.2 9.1 91 115-208 11-101 (292)
92 1eye_A DHPS 1, dihydropteroate 81.0 11 0.00038 32.5 10.0 82 122-212 26-110 (280)
93 1vyr_A Pentaerythritol tetrani 80.9 5.3 0.00018 35.5 8.1 86 125-211 161-273 (364)
94 2h9a_B CO dehydrogenase/acetyl 80.6 2.9 0.0001 36.8 6.2 82 125-211 74-159 (310)
95 3ewb_X 2-isopropylmalate synth 80.6 10 0.00035 32.7 9.6 137 61-212 23-175 (293)
96 3eb2_A Putative dihydrodipicol 79.9 4.8 0.00016 34.8 7.2 90 115-207 14-104 (300)
97 4avf_A Inosine-5'-monophosphat 79.9 7.3 0.00025 36.0 8.9 79 129-213 282-365 (490)
98 3oix_A Putative dihydroorotate 79.9 12 0.00042 33.1 10.1 80 124-209 140-227 (345)
99 4fxs_A Inosine-5'-monophosphat 79.6 7.7 0.00026 36.0 9.0 68 128-209 233-300 (496)
100 2ovl_A Putative racemase; stru 79.5 11 0.00038 33.0 9.7 81 123-210 146-226 (371)
101 1icp_A OPR1, 12-oxophytodienoa 79.5 3.8 0.00013 36.7 6.6 85 126-211 168-278 (376)
102 1wa3_A 2-keto-3-deoxy-6-phosph 79.2 3.2 0.00011 33.0 5.6 58 129-209 74-131 (205)
103 1qop_A Tryptophan synthase alp 79.1 20 0.00069 30.1 10.8 83 119-206 25-126 (268)
104 4ab4_A Xenobiotic reductase B; 79.1 7.4 0.00025 34.8 8.4 83 129-211 157-264 (362)
105 1tx2_A DHPS, dihydropteroate s 79.0 5.7 0.00019 34.8 7.4 97 107-212 39-145 (297)
106 1sfl_A 3-dehydroquinate dehydr 79.0 9.4 0.00032 31.9 8.6 90 108-206 4-101 (238)
107 3h5d_A DHDPS, dihydrodipicolin 78.9 12 0.00041 32.5 9.6 98 107-208 10-109 (311)
108 3e96_A Dihydrodipicolinate syn 78.3 8.4 0.00029 33.5 8.4 98 107-209 14-113 (316)
109 1ypf_A GMP reductase; GUAC, pu 78.2 7.3 0.00025 34.0 8.0 68 129-210 109-178 (336)
110 2cw6_A Hydroxymethylglutaryl-C 78.0 20 0.00068 30.6 10.6 89 115-211 145-234 (298)
111 4fxs_A Inosine-5'-monophosphat 78.0 6.8 0.00023 36.3 8.1 79 129-213 284-367 (496)
112 3gka_A N-ethylmaleimide reduct 77.9 7.9 0.00027 34.6 8.2 83 129-211 165-272 (361)
113 2nuw_A 2-keto-3-deoxygluconate 77.7 22 0.00074 30.4 10.7 86 115-208 9-97 (288)
114 3qfe_A Putative dihydrodipicol 77.3 10 0.00035 33.0 8.7 99 108-210 14-114 (318)
115 1wa3_A 2-keto-3-deoxy-6-phosph 77.3 9.8 0.00034 30.1 7.9 73 124-213 21-93 (205)
116 1f6y_A 5-methyltetrahydrofolat 77.3 7.8 0.00027 33.0 7.7 77 123-212 23-101 (262)
117 2nli_A Lactate oxidase; flavoe 77.2 9.1 0.00031 34.1 8.4 78 123-210 144-258 (368)
118 2r91_A 2-keto-3-deoxy-(6-phosp 77.0 19 0.00065 30.6 10.2 84 120-209 14-97 (286)
119 3ngf_A AP endonuclease, family 77.0 12 0.00042 30.5 8.7 88 108-211 10-115 (269)
120 2c6q_A GMP reductase 2; TIM ba 76.9 12 0.00041 33.1 9.1 70 128-211 120-191 (351)
121 1vzw_A Phosphoribosyl isomeras 76.9 14 0.00048 30.1 8.9 68 130-209 37-104 (244)
122 1gte_A Dihydropyrimidine dehyd 76.9 11 0.00038 37.8 9.8 74 130-209 653-735 (1025)
123 3daq_A DHDPS, dihydrodipicolin 76.2 14 0.00049 31.6 9.2 86 122-210 20-105 (292)
124 1w3i_A EDA, 2-keto-3-deoxy glu 75.5 16 0.00053 31.4 9.2 88 115-208 9-97 (293)
125 3glc_A Aldolase LSRF; TIM barr 75.4 35 0.0012 29.6 11.5 84 106-208 170-256 (295)
126 1xg4_A Probable methylisocitra 75.4 20 0.00069 31.2 10.0 108 93-206 66-184 (295)
127 2y88_A Phosphoribosyl isomeras 75.1 17 0.00057 29.5 8.9 69 129-209 35-103 (244)
128 1mdl_A Mandelate racemase; iso 75.1 21 0.0007 31.0 10.0 84 120-210 141-224 (359)
129 3o1n_A 3-dehydroquinate dehydr 75.0 32 0.0011 29.5 11.0 93 105-206 36-137 (276)
130 4e5t_A Mandelate racemase / mu 75.0 17 0.0006 32.4 9.8 87 121-209 149-242 (404)
131 2hzg_A Mandelate racemase/muco 74.8 37 0.0013 30.0 11.8 95 106-210 132-230 (401)
132 3qja_A IGPS, indole-3-glycerol 74.6 6.7 0.00023 33.6 6.6 63 130-209 127-189 (272)
133 3l5a_A NADH/flavin oxidoreduct 74.5 23 0.00079 32.1 10.5 81 129-211 174-287 (419)
134 3paj_A Nicotinate-nucleotide p 74.2 9 0.00031 34.0 7.4 64 128-210 241-304 (320)
135 2oz8_A MLL7089 protein; struct 74.0 38 0.0013 29.8 11.7 93 107-209 132-226 (389)
136 3rcy_A Mandelate racemase/muco 73.7 43 0.0015 30.3 12.1 100 107-210 125-238 (433)
137 2nql_A AGR_PAT_674P, isomerase 73.4 22 0.00075 31.4 9.9 92 107-210 152-243 (388)
138 1rqb_A Transcarboxylase 5S sub 73.2 41 0.0014 31.7 12.2 80 123-211 115-199 (539)
139 3ro6_B Putative chloromuconate 73.1 27 0.00094 30.4 10.4 83 119-209 136-218 (356)
140 1aj0_A DHPS, dihydropteroate s 72.7 13 0.00043 32.2 7.9 81 123-212 36-120 (282)
141 1ydo_A HMG-COA lyase; TIM-barr 72.7 8.3 0.00028 33.5 6.8 88 115-210 146-234 (307)
142 1tzz_A Hypothetical protein L1 72.6 31 0.0011 30.4 10.7 95 107-209 150-244 (392)
143 4fo4_A Inosine 5'-monophosphat 72.5 12 0.0004 33.6 7.9 80 128-213 160-244 (366)
144 2q02_A Putative cytoplasmic pr 72.3 35 0.0012 27.3 10.3 97 92-193 51-156 (272)
145 3tqv_A Nicotinate-nucleotide p 72.2 10 0.00034 33.2 7.2 62 129-209 209-270 (287)
146 3rmj_A 2-isopropylmalate synth 72.1 23 0.00079 31.6 9.7 131 61-207 30-175 (370)
147 2gdq_A YITF; mandelate racemas 71.8 20 0.00067 31.7 9.2 93 107-209 123-219 (382)
148 2og9_A Mandelate racemase/muco 71.7 26 0.00087 31.0 9.9 80 123-209 162-241 (393)
149 3khj_A Inosine-5-monophosphate 71.3 11 0.00039 33.5 7.5 79 129-213 157-240 (361)
150 3aty_A Tcoye, prostaglandin F2 71.3 16 0.00056 32.6 8.6 82 128-211 177-288 (379)
151 1ydn_A Hydroxymethylglutaryl-C 70.7 14 0.00048 31.4 7.7 102 99-210 127-232 (295)
152 3b8i_A PA4872 oxaloacetate dec 70.3 51 0.0018 28.5 11.3 108 93-206 70-185 (287)
153 2c6q_A GMP reductase 2; TIM ba 70.2 15 0.0005 32.6 7.9 79 128-212 172-255 (351)
154 3lab_A Putative KDPG (2-keto-3 70.1 16 0.00053 30.7 7.6 80 108-209 13-92 (217)
155 1tkk_A Similar to chloromucona 70.1 31 0.0011 29.9 10.0 83 120-209 137-221 (366)
156 3tr9_A Dihydropteroate synthas 70.1 21 0.00071 31.6 8.8 85 122-213 46-136 (314)
157 2pgw_A Muconate cycloisomerase 69.9 32 0.0011 30.2 10.1 80 122-210 146-225 (384)
158 3usb_A Inosine-5'-monophosphat 69.8 13 0.00045 34.5 7.9 79 129-213 309-392 (511)
159 4e38_A Keto-hydroxyglutarate-a 69.7 21 0.00073 30.0 8.5 92 92-209 22-113 (232)
160 1eep_A Inosine 5'-monophosphat 69.6 12 0.00043 33.3 7.4 79 128-212 205-288 (404)
161 2vc6_A MOSA, dihydrodipicolina 69.5 31 0.0011 29.3 9.7 92 106-211 68-165 (292)
162 1vhn_A Putative flavin oxidore 69.5 18 0.00061 31.1 8.2 95 105-209 56-160 (318)
163 3toy_A Mandelate racemase/muco 69.4 60 0.0021 28.7 12.7 99 99-209 148-247 (383)
164 1p0k_A Isopentenyl-diphosphate 69.2 20 0.00067 31.2 8.5 67 136-209 138-209 (349)
165 2qw5_A Xylose isomerase-like T 68.9 15 0.00051 31.1 7.5 107 92-206 65-211 (335)
166 2pp0_A L-talarate/galactarate 68.6 34 0.0012 30.3 10.1 80 123-209 175-254 (398)
167 3ble_A Citramalate synthase fr 68.5 4.9 0.00017 35.4 4.4 87 116-210 159-246 (337)
168 3stp_A Galactonate dehydratase 68.3 62 0.0021 29.0 11.9 106 99-210 158-265 (412)
169 3gd6_A Muconate cycloisomerase 68.3 41 0.0014 29.8 10.6 94 107-209 127-223 (391)
170 1rvk_A Isomerase/lactonizing e 68.1 35 0.0012 29.8 10.0 87 121-209 147-234 (382)
171 4h3d_A 3-dehydroquinate dehydr 67.9 33 0.0011 29.0 9.4 96 105-207 16-118 (258)
172 4e38_A Keto-hydroxyglutarate-a 67.8 7.6 0.00026 32.8 5.3 58 128-208 96-153 (232)
173 1rqb_A Transcarboxylase 5S sub 67.4 16 0.00055 34.6 7.9 81 123-210 173-253 (539)
174 3ffs_A Inosine-5-monophosphate 67.3 14 0.00048 33.6 7.3 80 128-213 195-279 (400)
175 2qiw_A PEP phosphonomutase; st 67.2 29 0.00099 29.5 8.9 105 93-206 68-185 (255)
176 3tva_A Xylose isomerase domain 66.8 28 0.00097 28.4 8.6 93 107-213 10-126 (290)
177 1nu5_A Chloromuconate cycloiso 66.8 58 0.002 28.2 11.1 81 122-209 141-222 (370)
178 2vp8_A Dihydropteroate synthas 66.8 16 0.00055 32.3 7.4 81 123-212 63-147 (318)
179 3u0h_A Xylose isomerase domain 66.7 45 0.0015 26.7 9.7 108 91-206 46-174 (281)
180 3k30_A Histamine dehydrogenase 66.3 28 0.00096 33.0 9.5 81 128-211 159-265 (690)
181 3ngf_A AP endonuclease, family 66.0 51 0.0018 26.6 14.1 136 56-207 17-181 (269)
182 1gox_A (S)-2-hydroxy-acid oxid 66.0 17 0.00057 32.3 7.4 76 125-210 136-254 (370)
183 2yr1_A 3-dehydroquinate dehydr 66.0 21 0.00071 30.2 7.7 74 123-208 98-175 (257)
184 3nav_A Tryptophan synthase alp 65.7 53 0.0018 28.0 10.4 12 194-205 117-128 (271)
185 2qq6_A Mandelate racemase/muco 65.6 41 0.0014 29.8 10.0 85 123-209 149-244 (410)
186 1i4n_A Indole-3-glycerol phosp 64.9 16 0.00054 31.1 6.8 119 58-208 57-177 (251)
187 2ze3_A DFA0005; organic waste 64.8 59 0.002 27.8 10.5 107 94-206 65-185 (275)
188 1vcv_A Probable deoxyribose-ph 64.1 32 0.0011 28.8 8.4 96 107-213 115-224 (226)
189 1k77_A EC1530, hypothetical pr 63.6 36 0.0012 27.1 8.5 107 90-206 38-173 (260)
190 3qxb_A Putative xylose isomera 63.5 27 0.00093 29.2 8.0 109 93-207 71-209 (316)
191 2tps_A Protein (thiamin phosph 63.4 6.9 0.00024 31.4 4.1 80 108-209 18-101 (227)
192 2hsa_B 12-oxophytodienoate red 63.3 14 0.00048 33.3 6.5 85 126-211 172-288 (402)
193 1s2w_A Phosphoenolpyruvate pho 63.0 75 0.0026 27.5 12.9 109 93-207 67-188 (295)
194 2yci_X 5-methyltetrahydrofolat 62.6 22 0.00075 30.4 7.3 76 124-212 33-110 (271)
195 1vhc_A Putative KHG/KDPG aldol 62.4 9.2 0.00031 31.8 4.7 56 129-208 80-136 (224)
196 2dqw_A Dihydropteroate synthas 62.4 19 0.00064 31.5 6.9 77 124-212 51-133 (294)
197 3o1n_A 3-dehydroquinate dehydr 62.1 33 0.0011 29.3 8.4 75 123-208 117-195 (276)
198 2qgy_A Enolase from the enviro 62.1 48 0.0016 29.2 9.7 80 122-209 148-228 (391)
199 2vef_A Dihydropteroate synthas 62.1 29 0.00098 30.4 8.1 81 123-212 31-115 (314)
200 3lab_A Putative KDPG (2-keto-3 62.0 13 0.00045 31.1 5.6 59 128-209 75-139 (217)
201 3kru_A NADH:flavin oxidoreduct 62.0 27 0.00092 30.8 8.0 81 129-211 147-251 (343)
202 2qde_A Mandelate racemase/muco 61.8 43 0.0015 29.6 9.3 90 107-209 134-223 (397)
203 1w8s_A FBP aldolase, fructose- 61.8 71 0.0024 26.8 11.9 85 106-206 137-228 (263)
204 2hjp_A Phosphonopyruvate hydro 61.8 78 0.0027 27.3 11.9 108 93-206 63-183 (290)
205 3iwp_A Copper homeostasis prot 61.7 21 0.00071 31.2 7.0 76 128-208 49-130 (287)
206 3sr7_A Isopentenyl-diphosphate 61.5 50 0.0017 29.4 9.7 74 129-209 158-237 (365)
207 3sgz_A Hydroxyacid oxidase 2; 61.2 26 0.00087 31.3 7.7 76 128-212 228-304 (352)
208 3eeg_A 2-isopropylmalate synth 61.1 15 0.00052 32.1 6.2 79 129-207 81-169 (325)
209 1geq_A Tryptophan synthase alp 61.0 9.9 0.00034 31.1 4.7 49 155-209 64-115 (248)
210 3q45_A Mandelate racemase/muco 60.3 56 0.0019 28.6 9.8 86 116-209 133-218 (368)
211 3rr1_A GALD, putative D-galact 60.0 53 0.0018 29.4 9.7 105 99-210 105-213 (405)
212 3ih1_A Methylisocitrate lyase; 60.0 63 0.0021 28.2 9.9 105 94-206 78-192 (305)
213 2nzl_A Hydroxyacid oxidase 1; 59.6 26 0.00089 31.5 7.6 45 156-210 237-281 (392)
214 3kws_A Putative sugar isomeras 59.6 29 0.00099 28.3 7.4 89 108-212 26-127 (287)
215 2qr6_A IMP dehydrogenase/GMP r 59.4 39 0.0013 29.8 8.6 77 129-212 223-309 (393)
216 3gnn_A Nicotinate-nucleotide p 59.3 30 0.001 30.3 7.7 63 129-210 220-282 (298)
217 2p8b_A Mandelate racemase/muco 59.1 31 0.0011 30.0 7.8 80 121-209 139-220 (369)
218 2rdx_A Mandelate racemase/muco 58.7 40 0.0014 29.5 8.5 80 120-208 142-221 (379)
219 2ftp_A Hydroxymethylglutaryl-C 58.6 29 0.001 29.7 7.4 88 115-210 148-236 (302)
220 3jr2_A Hexulose-6-phosphate sy 58.5 23 0.00078 28.6 6.4 66 130-211 75-141 (218)
221 4af0_A Inosine-5'-monophosphat 58.3 42 0.0014 32.0 8.9 70 128-211 283-352 (556)
222 1vhc_A Putative KHG/KDPG aldol 58.2 59 0.002 26.7 9.1 65 128-209 32-96 (224)
223 2nx9_A Oxaloacetate decarboxyl 57.9 37 0.0013 31.3 8.4 106 93-210 128-234 (464)
224 1tqj_A Ribulose-phosphate 3-ep 57.8 10 0.00036 31.3 4.3 68 128-206 20-89 (230)
225 3vkj_A Isopentenyl-diphosphate 57.4 11 0.00039 33.7 4.7 68 135-209 147-218 (368)
226 2nx9_A Oxaloacetate decarboxyl 57.3 66 0.0023 29.6 10.0 82 122-211 97-182 (464)
227 4adt_A Pyridoxine biosynthetic 57.3 28 0.00094 30.3 7.1 74 129-211 32-109 (297)
228 3ewb_X 2-isopropylmalate synth 57.2 67 0.0023 27.5 9.5 184 16-211 21-231 (293)
229 3sjn_A Mandelate racemase/muco 57.2 53 0.0018 28.8 9.1 81 125-210 148-229 (374)
230 3jva_A Dipeptide epimerase; en 57.1 45 0.0015 29.0 8.5 85 117-209 133-217 (354)
231 1sfl_A 3-dehydroquinate dehydr 57.0 48 0.0016 27.5 8.3 106 93-208 48-161 (238)
232 1k77_A EC1530, hypothetical pr 57.0 57 0.0019 25.9 8.6 77 121-212 14-108 (260)
233 3q58_A N-acetylmannosamine-6-p 57.0 68 0.0023 26.4 9.2 133 43-210 58-211 (229)
234 3lmz_A Putative sugar isomeras 56.7 66 0.0022 25.8 9.0 94 107-211 17-111 (257)
235 3m6y_A 4-hydroxy-2-oxoglutarat 56.0 7.9 0.00027 33.6 3.2 66 131-206 174-239 (275)
236 1vrd_A Inosine-5'-monophosphat 55.9 19 0.00065 32.8 6.1 79 128-212 289-372 (494)
237 3tsm_A IGPS, indole-3-glycerol 55.6 16 0.00054 31.5 5.2 62 130-208 134-195 (272)
238 3m0z_A Putative aldolase; MCSG 55.5 7.9 0.00027 33.2 3.1 66 131-206 151-216 (249)
239 3dx5_A Uncharacterized protein 55.5 33 0.0011 27.9 7.0 89 116-212 9-107 (286)
240 1wbh_A KHG/KDPG aldolase; lyas 55.4 56 0.0019 26.6 8.4 81 107-209 15-95 (214)
241 3b4u_A Dihydrodipicolinate syn 55.1 70 0.0024 27.2 9.3 95 106-211 71-173 (294)
242 1thf_D HISF protein; thermophI 55.1 64 0.0022 26.0 8.7 68 131-209 36-103 (253)
243 1zfj_A Inosine monophosphate d 54.9 39 0.0013 30.6 8.0 78 129-212 286-368 (491)
244 2v82_A 2-dehydro-3-deoxy-6-pho 54.8 41 0.0014 26.6 7.3 82 106-208 5-86 (212)
245 3i4k_A Muconate lactonizing en 54.2 1.1E+02 0.0038 26.8 10.7 83 120-209 145-228 (383)
246 3dx5_A Uncharacterized protein 54.0 48 0.0016 26.8 7.8 106 92-206 48-167 (286)
247 1qap_A Quinolinic acid phospho 54.0 38 0.0013 29.4 7.4 63 129-210 219-281 (296)
248 3bo9_A Putative nitroalkan dio 53.9 1.1E+02 0.0036 26.4 11.4 74 128-212 134-208 (326)
249 2q02_A Putative cytoplasmic pr 53.8 32 0.0011 27.6 6.6 84 119-212 16-108 (272)
250 3d0c_A Dihydrodipicolinate syn 53.8 87 0.003 26.9 9.7 90 106-211 80-171 (314)
251 3rmj_A 2-isopropylmalate synth 53.4 74 0.0025 28.3 9.4 75 121-206 30-104 (370)
252 3bg3_A Pyruvate carboxylase, m 53.2 70 0.0024 31.2 9.8 81 122-210 258-338 (718)
253 1xm3_A Thiazole biosynthesis p 53.2 29 0.00099 29.2 6.4 75 119-206 73-151 (264)
254 2poz_A Putative dehydratase; o 53.1 56 0.0019 28.7 8.6 87 121-209 135-233 (392)
255 3go2_A Putative L-alanine-DL-g 53.1 94 0.0032 27.6 10.1 89 119-209 139-247 (409)
256 2hmc_A AGR_L_411P, dihydrodipi 53.0 92 0.0031 27.3 9.9 88 115-209 36-125 (344)
257 2hk0_A D-psicose 3-epimerase; 53.0 74 0.0025 26.2 8.9 106 92-206 66-198 (309)
258 3eez_A Putative mandelate race 52.7 62 0.0021 28.5 8.8 80 120-208 142-221 (378)
259 3r0u_A Enzyme of enolase super 52.4 99 0.0034 27.2 10.1 83 119-209 138-222 (379)
260 1qpo_A Quinolinate acid phosph 52.2 22 0.00076 30.7 5.6 67 128-210 204-270 (284)
261 1i60_A IOLI protein; beta barr 52.0 54 0.0018 26.1 7.7 81 122-212 14-107 (278)
262 2o56_A Putative mandelate race 51.9 94 0.0032 27.3 9.9 85 123-209 152-249 (407)
263 2fli_A Ribulose-phosphate 3-ep 51.9 17 0.00057 28.9 4.5 70 128-207 19-89 (220)
264 4hb7_A Dihydropteroate synthas 51.7 85 0.0029 27.0 9.2 81 123-212 28-112 (270)
265 3iv3_A Tagatose 1,6-diphosphat 51.6 58 0.002 28.9 8.3 94 106-205 159-274 (332)
266 3vni_A Xylose isomerase domain 51.2 60 0.0021 26.3 8.0 109 91-206 46-179 (294)
267 1h1y_A D-ribulose-5-phosphate 51.2 18 0.00063 29.4 4.7 67 127-206 21-91 (228)
268 4e4u_A Mandalate racemase/muco 51.2 1.1E+02 0.0037 27.3 10.2 87 121-209 142-235 (412)
269 3bjs_A Mandelate racemase/muco 51.1 1.4E+02 0.0046 26.7 12.4 77 125-209 187-263 (428)
270 1wbh_A KHG/KDPG aldolase; lyas 51.0 17 0.00059 29.8 4.5 57 129-208 79-135 (214)
271 3e96_A Dihydrodipicolinate syn 50.8 96 0.0033 26.6 9.5 92 106-211 80-171 (316)
272 1zlp_A PSR132, petal death pro 50.7 1.1E+02 0.0036 26.9 9.8 91 115-206 106-206 (318)
273 2o7s_A DHQ-SDH PR, bifunctiona 50.5 78 0.0027 29.1 9.4 86 107-206 4-96 (523)
274 3k13_A 5-methyltetrahydrofolat 50.1 44 0.0015 29.1 7.2 77 123-212 35-116 (300)
275 3oa3_A Aldolase; structural ge 49.9 83 0.0028 27.4 8.9 89 110-212 175-266 (288)
276 2wkj_A N-acetylneuraminate lya 49.6 93 0.0032 26.6 9.2 93 106-211 79-176 (303)
277 1mxs_A KDPG aldolase; 2-keto-3 49.6 15 0.00052 30.4 4.0 57 129-208 89-145 (225)
278 3dz1_A Dihydrodipicolinate syn 49.4 79 0.0027 27.1 8.8 84 120-211 84-174 (313)
279 3obe_A Sugar phosphate isomera 49.3 20 0.0007 30.1 4.9 86 93-183 77-171 (305)
280 2nzl_A Hydroxyacid oxidase 1; 49.0 65 0.0022 28.8 8.4 75 128-211 263-338 (392)
281 3f4w_A Putative hexulose 6 pho 48.9 58 0.002 25.5 7.3 73 128-211 117-189 (211)
282 1f76_A Dihydroorotate dehydrog 48.5 1.2E+02 0.004 25.9 9.7 95 106-212 210-321 (336)
283 1twd_A Copper homeostasis prot 48.1 85 0.0029 26.9 8.6 20 129-148 12-31 (256)
284 3aam_A Endonuclease IV, endoiv 47.8 39 0.0013 27.3 6.2 79 131-212 20-111 (270)
285 1f6k_A N-acetylneuraminate lya 47.8 1E+02 0.0035 26.1 9.1 92 106-211 72-168 (293)
286 3dg3_A Muconate cycloisomerase 47.7 1E+02 0.0035 26.8 9.3 82 120-209 136-219 (367)
287 3vnd_A TSA, tryptophan synthas 47.6 1.3E+02 0.0044 25.5 10.4 14 193-206 114-127 (267)
288 1rpx_A Protein (ribulose-phosp 47.6 29 0.00099 27.9 5.4 72 127-207 25-96 (230)
289 4h3d_A 3-dehydroquinate dehydr 47.5 1.2E+02 0.0043 25.3 9.7 76 123-209 97-176 (258)
290 3igs_A N-acetylmannosamine-6-p 47.5 1.2E+02 0.004 25.0 10.6 134 43-210 58-211 (232)
291 3tva_A Xylose isomerase domain 47.3 47 0.0016 27.0 6.7 106 92-206 51-179 (290)
292 1to3_A Putative aldolase YIHT; 47.2 87 0.003 27.0 8.7 102 93-206 143-251 (304)
293 1tv5_A Dhodehase, dihydroorota 47.1 1.3E+02 0.0046 27.4 10.3 26 183-209 306-331 (443)
294 1nvm_A HOA, 4-hydroxy-2-oxoval 47.0 45 0.0015 29.1 6.8 83 121-210 145-227 (345)
295 3eeg_A 2-isopropylmalate synth 47.0 42 0.0014 29.2 6.6 91 115-210 140-231 (325)
296 1mxs_A KDPG aldolase; 2-keto-3 46.9 1E+02 0.0035 25.3 8.7 65 128-209 41-105 (225)
297 1kbi_A Cytochrome B2, L-LCR; f 46.8 30 0.001 32.2 6.0 41 160-210 332-372 (511)
298 1h7n_A 5-aminolaevulinic acid 46.8 1.2E+02 0.0041 27.1 9.5 132 58-209 18-179 (342)
299 1u83_A Phosphosulfolactate syn 46.7 41 0.0014 29.3 6.3 130 60-208 48-191 (276)
300 1l6s_A Porphobilinogen synthas 46.2 1.1E+02 0.0038 27.2 9.1 112 86-209 28-164 (323)
301 2nli_A Lactate oxidase; flavoe 46.2 71 0.0024 28.2 8.1 74 128-210 240-314 (368)
302 3exr_A RMPD (hexulose-6-phosph 46.1 31 0.001 28.3 5.3 130 52-210 62-197 (221)
303 1qtw_A Endonuclease IV; DNA re 45.9 36 0.0012 27.5 5.7 79 131-212 18-112 (285)
304 1q7z_A 5-methyltetrahydrofolat 45.6 78 0.0027 29.8 8.7 76 124-212 339-416 (566)
305 1o94_A Tmadh, trimethylamine d 45.5 56 0.0019 31.3 7.8 85 126-211 150-259 (729)
306 3cu2_A Ribulose-5-phosphate 3- 45.0 12 0.00039 31.6 2.5 65 129-206 30-96 (237)
307 1gox_A (S)-2-hydroxy-acid oxid 44.9 50 0.0017 29.1 6.9 74 129-211 237-311 (370)
308 3p6l_A Sugar phosphate isomera 44.7 1.2E+02 0.004 24.2 9.5 98 107-211 9-113 (262)
309 3ngj_A Deoxyribose-phosphate a 44.5 41 0.0014 28.5 5.9 89 110-212 144-232 (239)
310 2r91_A 2-keto-3-deoxy-(6-phosp 44.5 1.4E+02 0.0048 25.1 9.4 81 120-211 72-157 (286)
311 2r8w_A AGR_C_1641P; APC7498, d 44.4 90 0.0031 27.2 8.4 92 106-211 102-198 (332)
312 3qc0_A Sugar isomerase; TIM ba 44.0 59 0.002 25.9 6.7 86 91-182 44-143 (275)
313 3r12_A Deoxyribose-phosphate a 43.9 65 0.0022 27.6 7.2 84 117-212 165-248 (260)
314 3vav_A 3-methyl-2-oxobutanoate 43.7 1.6E+02 0.0054 25.4 10.0 10 62-71 16-25 (275)
315 2y5s_A DHPS, dihydropteroate s 43.7 66 0.0023 27.9 7.3 81 123-212 44-127 (294)
316 2hk0_A D-psicose 3-epimerase; 43.5 93 0.0032 25.6 8.0 92 108-210 21-128 (309)
317 2ox4_A Putative mandelate race 43.5 1.1E+02 0.0037 26.9 8.8 85 123-209 146-243 (403)
318 1muw_A Xylose isomerase; atomi 43.4 92 0.0032 27.0 8.3 85 123-212 34-139 (386)
319 1h5y_A HISF; histidine biosynt 43.3 67 0.0023 25.4 6.9 71 128-209 36-106 (253)
320 2gl5_A Putative dehydratase pr 43.3 1.1E+02 0.0036 27.0 8.8 85 123-209 150-252 (410)
321 2hxt_A L-fuconate dehydratase; 43.2 1.3E+02 0.0044 26.9 9.5 93 107-209 184-276 (441)
322 3ctl_A D-allulose-6-phosphate 43.1 22 0.00076 29.5 4.0 65 129-207 17-85 (231)
323 3cqj_A L-ribulose-5-phosphate 43.0 74 0.0025 25.9 7.3 101 106-211 15-130 (295)
324 1kbi_A Cytochrome B2, L-LCR; f 42.8 98 0.0033 28.7 8.8 77 128-211 354-434 (511)
325 3my9_A Muconate cycloisomerase 42.7 82 0.0028 27.6 7.9 81 122-209 145-225 (377)
326 3tdn_A FLR symmetric alpha-bet 42.5 42 0.0014 27.3 5.6 71 129-210 39-109 (247)
327 2zvr_A Uncharacterized protein 42.4 1E+02 0.0035 25.0 8.1 132 63-206 39-197 (290)
328 2z6i_A Trans-2-enoyl-ACP reduc 42.2 48 0.0016 28.5 6.2 73 129-212 121-194 (332)
329 1xla_A D-xylose isomerase; iso 42.2 53 0.0018 28.7 6.6 81 131-212 39-139 (394)
330 3ddm_A Putative mandelate race 42.1 1E+02 0.0035 27.3 8.5 78 125-210 157-234 (392)
331 3r2g_A Inosine 5'-monophosphat 42.1 51 0.0017 29.4 6.4 76 128-213 152-232 (361)
332 3a24_A Alpha-galactosidase; gl 42.0 14 0.00048 35.8 2.9 88 115-208 300-393 (641)
333 2yxg_A DHDPS, dihydrodipicolin 42.0 1.5E+02 0.0051 25.0 9.2 93 106-211 68-165 (289)
334 2ps2_A Putative mandelate race 41.5 74 0.0025 27.6 7.4 88 107-208 135-223 (371)
335 1vli_A Spore coat polysacchari 40.9 29 0.001 31.5 4.7 37 174-210 27-65 (385)
336 2ojp_A DHDPS, dihydrodipicolin 40.9 52 0.0018 27.9 6.2 92 106-211 69-165 (292)
337 3v3w_A Starvation sensing prot 40.5 1.1E+02 0.0038 27.4 8.5 87 122-210 148-261 (424)
338 3i65_A Dihydroorotate dehydrog 40.1 1.5E+02 0.0053 26.9 9.4 71 135-209 208-303 (415)
339 3mwc_A Mandelate racemase/muco 39.7 81 0.0028 28.0 7.5 91 106-209 148-238 (400)
340 3fkr_A L-2-keto-3-deoxyarabona 39.5 1.8E+02 0.0061 24.8 11.3 98 106-211 76-176 (309)
341 1pii_A N-(5'phosphoribosyl)ant 39.5 46 0.0016 30.7 5.9 62 130-208 122-183 (452)
342 1qwg_A PSL synthase;, (2R)-pho 39.4 60 0.002 27.8 6.2 128 60-208 21-167 (251)
343 2z6i_A Trans-2-enoyl-ACP reduc 39.3 85 0.0029 26.9 7.4 87 106-211 11-97 (332)
344 1ypf_A GMP reductase; GUAC, pu 39.2 38 0.0013 29.4 5.1 75 129-213 161-243 (336)
345 2qr6_A IMP dehydrogenase/GMP r 39.2 66 0.0023 28.3 6.7 70 130-211 170-241 (393)
346 1x1o_A Nicotinate-nucleotide p 39.2 97 0.0033 26.6 7.6 64 128-210 206-269 (286)
347 4a3u_A NCR, NADH\:flavin oxido 39.1 1.4E+02 0.0046 26.2 8.7 85 128-212 155-264 (358)
348 2b7n_A Probable nicotinate-nuc 39.0 1E+02 0.0035 26.1 7.7 65 129-210 193-258 (273)
349 2zad_A Muconate cycloisomerase 38.4 1.9E+02 0.0063 24.7 11.5 79 122-209 138-218 (345)
350 3kws_A Putative sugar isomeras 38.4 1.6E+02 0.0053 23.8 11.9 111 90-206 62-193 (287)
351 3s5o_A 4-hydroxy-2-oxoglutarat 38.1 1.9E+02 0.0064 24.7 10.0 97 106-211 82-180 (307)
352 1w5q_A Delta-aminolevulinic ac 37.6 1.9E+02 0.0064 25.8 9.2 111 86-209 36-175 (337)
353 3eb2_A Putative dihydrodipicol 37.6 1.6E+02 0.0055 25.0 8.8 84 120-211 81-168 (300)
354 1xky_A Dihydrodipicolinate syn 37.4 1.9E+02 0.0065 24.5 9.7 92 106-211 80-176 (301)
355 3qc0_A Sugar isomerase; TIM ba 37.4 83 0.0029 25.0 6.6 78 122-212 18-106 (275)
356 2qul_A D-tagatose 3-epimerase; 37.3 1.2E+02 0.0041 24.3 7.7 74 131-210 23-109 (290)
357 3ajx_A 3-hexulose-6-phosphate 37.1 1.1E+02 0.0038 23.7 7.2 68 130-211 69-136 (207)
358 2ocz_A 3-dehydroquinate dehydr 37.0 40 0.0014 28.0 4.7 71 122-208 75-147 (231)
359 3r4e_A Mandelate racemase/muco 37.0 1.6E+02 0.0055 26.2 9.0 105 99-210 123-255 (418)
360 3eoo_A Methylisocitrate lyase; 37.0 2.1E+02 0.007 24.8 10.0 98 105-206 81-188 (298)
361 3cpr_A Dihydrodipicolinate syn 36.8 2E+02 0.0067 24.5 9.4 92 106-211 84-180 (304)
362 3tfx_A Orotidine 5'-phosphate 36.8 1.5E+02 0.005 25.1 8.3 92 65-167 144-236 (259)
363 1yad_A Regulatory protein TENI 36.7 60 0.002 25.8 5.6 74 128-212 120-195 (221)
364 3tji_A Mandelate racemase/muco 36.5 1.3E+02 0.0045 26.9 8.4 86 122-209 153-256 (422)
365 3hv8_A Protein FIMX; EAL phosp 36.3 52 0.0018 26.9 5.3 96 91-207 152-248 (268)
366 3sbf_A Mandelate racemase / mu 35.9 1.2E+02 0.0042 26.7 8.0 87 122-210 132-236 (401)
367 1bxb_A Xylose isomerase; xylos 35.8 1.2E+02 0.0041 26.3 7.9 86 121-211 32-138 (387)
368 3ayv_A Putative uncharacterize 35.8 1.2E+02 0.0041 24.0 7.3 71 131-212 16-99 (254)
369 1y0e_A Putative N-acetylmannos 35.7 1.6E+02 0.0054 23.1 8.4 73 128-210 129-205 (223)
370 1o5k_A DHDPS, dihydrodipicolin 35.6 2.1E+02 0.007 24.4 9.3 93 106-211 80-177 (306)
371 1vcf_A Isopentenyl-diphosphate 35.5 33 0.0011 29.6 4.1 65 138-210 145-213 (332)
372 3sgz_A Hydroxyacid oxidase 2; 35.1 60 0.002 28.9 5.7 41 159-209 205-245 (352)
373 3p3b_A Mandelate racemase/muco 35.0 1.1E+02 0.0038 26.8 7.6 83 125-209 150-235 (392)
374 1yx1_A Hypothetical protein PA 34.9 80 0.0027 25.4 6.2 74 130-212 28-107 (264)
375 2yw3_A 4-hydroxy-2-oxoglutarat 34.7 1.1E+02 0.0038 24.5 6.9 78 108-209 13-90 (207)
376 1xm3_A Thiazole biosynthesis p 34.7 13 0.00043 31.5 1.2 26 90-120 22-47 (264)
377 1ka9_F Imidazole glycerol phos 34.7 1.3E+02 0.0043 24.2 7.3 70 130-210 36-105 (252)
378 3mkc_A Racemase; metabolic pro 34.6 2.1E+02 0.0073 25.1 9.4 79 127-210 161-241 (394)
379 3dip_A Enolase; structural gen 34.5 1.8E+02 0.0061 25.8 8.9 79 129-209 162-247 (410)
380 3vcn_A Mannonate dehydratase; 34.4 1.1E+02 0.0039 27.3 7.6 87 122-210 149-262 (425)
381 2bmb_A Folic acid synthesis pr 34.3 1.1E+02 0.0038 28.9 7.7 100 106-212 223-341 (545)
382 3kts_A Glycerol uptake operon 34.2 24 0.00083 28.9 2.8 94 88-211 88-181 (192)
383 1qgu_B Protein (nitrogenase mo 34.1 93 0.0032 28.8 7.1 127 57-212 267-393 (519)
384 3bw2_A 2-nitropropane dioxygen 33.9 76 0.0026 27.7 6.2 74 129-212 156-240 (369)
385 3ugv_A Enolase; enzyme functio 33.9 2.4E+02 0.0083 24.7 9.7 81 122-209 170-253 (390)
386 3i6e_A Muconate cycloisomerase 33.8 2.1E+02 0.0072 25.0 9.2 80 122-209 147-226 (385)
387 3ktc_A Xylose isomerase; putat 33.7 39 0.0013 28.6 4.2 23 190-212 108-130 (333)
388 3qfe_A Putative dihydrodipicol 33.6 2.3E+02 0.0078 24.3 11.0 97 106-211 79-179 (318)
389 2p0o_A Hypothetical protein DU 33.5 70 0.0024 28.8 5.9 62 117-183 10-71 (372)
390 3ru6_A Orotidine 5'-phosphate 33.4 1.2E+02 0.0042 26.3 7.4 108 90-210 178-286 (303)
391 3iix_A Biotin synthetase, puta 33.4 2.1E+02 0.0073 23.9 9.1 74 122-208 84-158 (348)
392 4dbe_A Orotidine 5'-phosphate 33.2 85 0.0029 25.8 6.1 67 91-172 146-216 (222)
393 3jr2_A Hexulose-6-phosphate sy 33.0 38 0.0013 27.2 3.8 74 129-211 123-196 (218)
394 4h1z_A Enolase Q92ZS5; dehydra 33.0 2.6E+02 0.0088 24.7 11.3 85 115-209 182-266 (412)
395 2pcq_A Putative dihydrodipicol 32.9 49 0.0017 28.0 4.6 85 115-208 8-94 (283)
396 3aal_A Probable endonuclease 4 32.7 82 0.0028 25.9 6.0 96 109-212 7-117 (303)
397 2yzr_A Pyridoxal biosynthesis 32.7 75 0.0026 28.3 5.9 18 128-146 27-44 (330)
398 3daq_A DHDPS, dihydrodipicolin 31.7 2.3E+02 0.0079 23.8 10.9 93 106-211 70-166 (292)
399 1pv8_A Delta-aminolevulinic ac 31.6 1.3E+02 0.0043 26.8 7.1 133 57-209 6-168 (330)
400 1vs1_A 3-deoxy-7-phosphoheptul 31.5 57 0.0019 28.0 4.8 35 175-209 38-72 (276)
401 2qul_A D-tagatose 3-epimerase; 31.4 52 0.0018 26.5 4.4 107 92-205 47-179 (290)
402 3ivs_A Homocitrate synthase, m 31.4 1.2E+02 0.0042 27.6 7.3 79 123-210 178-256 (423)
403 1w1z_A Delta-aminolevulinic ac 31.3 2.1E+02 0.007 25.5 8.4 110 86-209 34-170 (328)
404 2x7v_A Probable endonuclease 4 31.2 85 0.0029 25.2 5.7 79 131-212 18-112 (287)
405 2nv1_A Pyridoxal biosynthesis 31.1 1.4E+02 0.0047 25.2 7.3 69 129-207 32-105 (305)
406 3tsm_A IGPS, indole-3-glycerol 31.0 95 0.0033 26.5 6.2 70 129-209 180-249 (272)
407 3tjl_A NADPH dehydrogenase; OL 31.0 1.8E+02 0.0063 26.2 8.4 82 130-211 173-288 (407)
408 3qze_A DHDPS, dihydrodipicolin 30.8 2.5E+02 0.0087 24.0 10.5 92 106-211 91-187 (314)
409 3ceu_A Thiamine phosphate pyro 30.7 68 0.0023 25.6 5.0 17 129-145 17-33 (210)
410 1lxj_A YBL001C, hypothetical 1 30.7 23 0.0008 26.1 1.9 54 116-171 12-68 (104)
411 1tv5_A Dhodehase, dihydroorota 30.6 1.7E+02 0.0057 26.8 8.1 81 124-212 310-405 (443)
412 1vc4_A Indole-3-glycerol phosp 30.2 88 0.003 26.1 5.8 61 130-208 120-180 (254)
413 3tj4_A Mandelate racemase; eno 29.4 2.8E+02 0.0096 24.0 10.7 80 123-209 151-231 (372)
414 2qdd_A Mandelate racemase/muco 29.3 1.6E+02 0.0054 25.5 7.5 87 107-207 134-220 (378)
415 2zds_A Putative DNA-binding pr 29.2 46 0.0016 27.7 3.8 24 189-212 111-134 (340)
416 2qf7_A Pyruvate carboxylase pr 29.2 1.1E+02 0.0039 31.3 7.3 81 121-210 705-785 (1165)
417 1vr6_A Phospho-2-dehydro-3-deo 29.1 86 0.0029 27.9 5.7 124 57-210 16-141 (350)
418 3qja_A IGPS, indole-3-glycerol 28.9 2.6E+02 0.0089 23.5 9.7 64 130-207 77-140 (272)
419 1chr_A Chloromuconate cycloiso 28.9 2.4E+02 0.0084 24.3 8.7 80 123-209 142-222 (370)
420 1sjd_A N-acylamino acid racema 28.8 1.5E+02 0.0052 25.5 7.2 76 123-209 141-216 (368)
421 1zco_A 2-dehydro-3-deoxyphosph 28.7 76 0.0026 26.8 5.1 35 176-210 24-58 (262)
422 1lxn_A Hypothetical protein MT 28.7 35 0.0012 24.8 2.6 76 116-193 8-93 (99)
423 1qo2_A Molecule: N-((5-phospho 28.6 1.4E+02 0.0047 23.9 6.6 69 130-210 35-103 (241)
424 2jbm_A Nicotinate-nucleotide p 28.5 1.6E+02 0.0053 25.4 7.2 65 129-210 208-273 (299)
425 1p0k_A Isopentenyl-diphosphate 28.4 1.8E+02 0.0062 24.9 7.7 91 106-212 177-283 (349)
426 3ih1_A Methylisocitrate lyase; 28.2 1.4E+02 0.0049 25.9 6.9 86 115-207 64-162 (305)
427 3fa4_A 2,3-dimethylmalate lyas 28.1 2.9E+02 0.01 23.9 9.6 91 115-206 85-187 (302)
428 1ujp_A Tryptophan synthase alp 28.1 2.7E+02 0.0091 23.4 8.5 71 115-205 48-122 (271)
429 3m5v_A DHDPS, dihydrodipicolin 27.9 2.8E+02 0.0094 23.5 11.6 92 107-211 77-173 (301)
430 3vni_A Xylose isomerase domain 27.7 2.3E+02 0.0077 22.7 7.8 84 115-208 9-107 (294)
431 3t7v_A Methylornithine synthas 27.7 1.6E+02 0.0056 24.9 7.2 77 122-207 91-167 (350)
432 3gk0_A PNP synthase, pyridoxin 27.7 3E+02 0.01 23.8 9.4 87 90-192 140-229 (278)
433 3noy_A 4-hydroxy-3-methylbut-2 27.7 1.4E+02 0.0048 26.9 6.8 70 97-185 75-145 (366)
434 2ehh_A DHDPS, dihydrodipicolin 27.6 2.7E+02 0.0094 23.3 10.0 93 106-211 68-165 (294)
435 3i65_A Dihydroorotate dehydrog 27.6 44 0.0015 30.5 3.6 80 125-212 283-377 (415)
436 1o4u_A Type II quinolic acid p 27.4 53 0.0018 28.4 3.9 40 159-207 179-218 (285)
437 4dwd_A Mandelate racemase/muco 27.3 3.2E+02 0.011 24.0 12.3 88 121-210 137-226 (393)
438 1zlp_A PSR132, petal death pro 27.2 1.6E+02 0.0055 25.7 7.1 50 156-207 85-134 (318)
439 3hq1_A 2-isopropylmalate synth 26.9 3.3E+02 0.011 26.2 9.7 91 107-209 71-173 (644)
440 2qjg_A Putative aldolase MJ040 26.8 2.6E+02 0.0087 22.7 9.1 88 107-211 145-239 (273)
441 2zbt_A Pyridoxal biosynthesis 26.7 1.4E+02 0.0049 24.8 6.5 70 128-206 31-104 (297)
442 3l21_A DHDPS, dihydrodipicolin 26.5 2.9E+02 0.01 23.4 8.6 92 106-211 83-179 (304)
443 3hbl_A Pyruvate carboxylase; T 26.4 1.1E+02 0.0039 31.3 6.7 80 122-210 689-768 (1150)
444 1me8_A Inosine-5'-monophosphat 26.2 1.6E+02 0.0055 26.9 7.2 68 130-210 246-313 (503)
445 1me8_A Inosine-5'-monophosphat 26.1 84 0.0029 28.8 5.3 80 128-212 295-384 (503)
446 2rfg_A Dihydrodipicolinate syn 26.1 3E+02 0.01 23.2 10.2 92 106-211 68-164 (297)
447 1yqh_A DUF77, IG hypothetical 26.1 40 0.0014 25.1 2.5 54 116-171 14-69 (109)
448 3fok_A Uncharacterized protein 25.9 87 0.003 27.6 5.1 84 106-206 175-270 (307)
449 1i60_A IOLI protein; beta barr 25.9 2.4E+02 0.0082 22.1 10.2 109 92-206 46-169 (278)
450 3mqt_A Mandelate racemase/muco 25.9 3.3E+02 0.011 23.8 12.7 79 127-210 156-236 (394)
451 3cqj_A L-ribulose-5-phosphate 25.6 1.2E+02 0.004 24.7 5.6 106 93-206 67-191 (295)
452 3obk_A Delta-aminolevulinic ac 25.5 3.7E+02 0.013 24.1 9.3 113 86-209 44-183 (356)
453 1vcf_A Isopentenyl-diphosphate 25.4 1.5E+02 0.0052 25.3 6.6 97 98-212 174-288 (332)
454 2o7s_A DHQ-SDH PR, bifunctiona 25.2 1.8E+02 0.0062 26.6 7.4 74 123-208 77-153 (523)
455 3t6c_A RSPA, putative MAND fam 25.1 3.3E+02 0.011 24.4 9.0 87 121-209 153-274 (440)
456 4a35_A Mitochondrial enolase s 24.9 3.8E+02 0.013 24.0 15.2 133 49-210 147-280 (441)
457 3bg3_A Pyruvate carboxylase, m 24.8 4.8E+02 0.017 25.3 10.6 154 43-212 94-286 (718)
458 3lye_A Oxaloacetate acetyl hyd 24.7 3.4E+02 0.012 23.5 11.0 110 93-206 74-195 (307)
459 1xim_A D-xylose isomerase; iso 24.6 2.7E+02 0.0092 24.1 8.1 85 121-211 32-138 (393)
460 2pge_A MENC; OSBS, NYSGXRC, PS 24.5 3.4E+02 0.012 23.4 9.1 80 123-209 162-242 (377)
461 2v9d_A YAGE; dihydrodipicolini 24.4 3.5E+02 0.012 23.5 9.8 93 106-211 99-196 (343)
462 3qfw_A Ribulose-1,5-bisphospha 24.4 55 0.0019 29.6 3.6 65 138-208 96-165 (378)
463 3hvb_A Protein FIMX; EAL phosp 24.4 1E+02 0.0034 27.0 5.3 98 90-207 320-417 (437)
464 3eoo_A Methylisocitrate lyase; 24.2 1.8E+02 0.0061 25.2 6.8 32 175-207 85-116 (298)
465 3hl2_A O-phosphoseryl-tRNA(SEC 24.1 31 0.0011 32.4 1.9 78 128-210 202-282 (501)
466 3l9c_A 3-dehydroquinate dehydr 24.1 1.9E+02 0.0067 24.3 6.8 86 107-206 34-127 (259)
467 3o6c_A PNP synthase, pyridoxin 24.0 1.7E+02 0.0057 25.2 6.3 155 16-192 7-221 (260)
468 2f6u_A GGGPS, (S)-3-O-geranylg 23.9 1.7E+02 0.0058 24.3 6.4 67 115-206 14-81 (234)
469 2yyu_A Orotidine 5'-phosphate 23.7 2.4E+02 0.0081 23.0 7.2 32 176-207 56-87 (246)
470 3fa4_A 2,3-dimethylmalate lyas 23.5 1.5E+02 0.005 25.8 6.1 48 158-207 66-113 (302)
471 2gjl_A Hypothetical protein PA 23.3 1.3E+02 0.0044 25.6 5.6 74 129-212 129-204 (328)
472 3fk4_A Rubisco-like protein; s 23.1 59 0.002 29.7 3.5 67 139-208 106-175 (414)
473 3dxi_A Putative aldolase; TIM 23.1 75 0.0026 27.7 4.1 73 128-210 147-219 (320)
474 2w6r_A Imidazole glycerol phos 23.0 1.7E+02 0.0059 23.6 6.2 71 130-211 35-105 (266)
475 3m47_A Orotidine 5'-phosphate 22.8 1.4E+02 0.0049 24.3 5.6 31 133-165 190-220 (228)
476 2epi_A UPF0045 protein MJ1052; 22.6 44 0.0015 24.3 2.2 74 116-191 13-93 (100)
477 1jcn_A Inosine monophosphate d 22.4 2.2E+02 0.0075 25.9 7.3 75 129-212 308-390 (514)
478 3zwt_A Dihydroorotate dehydrog 22.4 96 0.0033 27.5 4.7 80 125-212 234-330 (367)
479 3flu_A DHDPS, dihydrodipicolin 22.2 3.5E+02 0.012 22.7 9.9 92 106-211 75-171 (297)
480 2bdq_A Copper homeostasis prot 21.8 1.6E+02 0.0055 24.6 5.7 71 131-206 14-93 (224)
481 3lmz_A Putative sugar isomeras 21.7 1.8E+02 0.0061 23.1 6.0 74 92-183 61-134 (257)
482 3u7q_B Nitrogenase molybdenum- 21.6 1.6E+02 0.0055 27.3 6.3 125 59-212 273-397 (523)
483 3kdn_A Rubisco, ribulose bisph 21.6 67 0.0023 29.7 3.6 66 139-208 121-190 (444)
484 2d73_A Alpha-glucosidase SUSB; 21.6 1.2E+02 0.0043 29.8 5.6 90 115-208 362-468 (738)
485 4a29_A Engineered retro-aldol 21.3 1.1E+02 0.0038 26.2 4.7 61 129-206 117-177 (258)
486 4hpn_A Putative uncharacterize 21.1 3.9E+02 0.013 22.9 11.5 93 108-209 129-222 (378)
487 3cyj_A Mandelate racemase/muco 21.0 4E+02 0.014 22.9 12.3 92 107-209 131-223 (372)
488 4ggj_A Mitochondrial cardiolip 21.0 38 0.0013 27.0 1.6 76 115-205 39-114 (196)
489 3ve9_A Orotidine-5'-phosphate 20.8 2.5E+02 0.0084 22.9 6.7 80 65-164 115-197 (215)
490 1vkf_A Glycerol uptake operon 20.6 80 0.0027 25.8 3.5 28 178-210 151-178 (188)
491 3nwr_A A rubisco-like protein; 20.5 66 0.0023 29.6 3.3 66 139-208 127-196 (432)
492 1yx1_A Hypothetical protein PA 20.4 2.2E+02 0.0077 22.6 6.3 21 161-183 142-165 (264)
493 3qxb_A Putative xylose isomera 20.4 2.4E+02 0.0082 23.1 6.7 76 132-211 42-136 (316)
494 2w6r_A Imidazole glycerol phos 20.3 2.1E+02 0.0072 23.0 6.2 71 130-212 161-232 (266)
495 3l0g_A Nicotinate-nucleotide p 20.2 1.3E+02 0.0045 26.3 5.0 39 159-207 194-232 (300)
496 3fcp_A L-Ala-D/L-Glu epimerase 20.1 4.3E+02 0.015 22.9 9.9 80 123-209 147-227 (381)
No 1
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=100.00 E-value=2e-55 Score=390.62 Aligned_cols=166 Identities=20% Similarity=0.232 Sum_probs=154.6
Q ss_pred HhHHHHHHHhhhhhcccCCCCCCCHHHHHHHHHHhh-cc-CchhhhccccccCcccHHHHHHhhhcCC---CCCCeEEEe
Q psy965 40 KNKKSLLLKIIEFIDLTTLSGDDTEAVVETLTLKAI-QP-LSEELKEKVLRGFVSTVWHGSDNLKTKL---VYQPCLSQP 114 (214)
Q Consensus 40 ~~~~~~l~~~~~~ID~TlL~~~~T~~~I~~lc~eA~-~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~g---s~v~vatV~ 114 (214)
-.|..|.++++++||||+|+|++|+++|+++|++|+ +| |. .+|+||+||+.+++.|++.+ ++++||+|
T Consensus 17 ~~~~~~~~~la~~IDhTlL~p~~T~e~I~~lc~eA~~~~~~a------aVCV~P~~V~~a~~~L~~~~~~~s~v~V~tV- 89 (297)
T 4eiv_A 17 IYKQFTSRTLLNFFEVAALTDGETNESVAAVCKIAAKDPAIV------GVSVRPAFVRFIRQELVKSAPEVAGIKVCAA- 89 (297)
T ss_dssp HHHHHHHHHHHTTEEEEECSTTCCHHHHHHHHHHHHSSSCCS------EEEECGGGHHHHHHTGGGTCGGGGGSEEEEE-
T ss_pred ehhhhhHHHHHHhcCccCCCCCCCHHHHHHHHHHHHhhcCcE------EEEECHHHHHHHHHHhcccCcCCCCCeEEEE-
Confidence 346788899999999999999999999999999999 55 54 67999999999999998322 68999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhc---CChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHH
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN---NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENI 191 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s---g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i 191 (214)
+|||+|++++++|++|+++|+++||+|||||||++++++ |+|+++++||++++++|++ .+||||||||+|+++|+|
T Consensus 90 igFP~G~~~~e~K~~Ea~~Av~~GAdEIDmVinig~lk~~~~g~~~~V~~eI~~v~~a~~~-~~lKVIlEt~~Lt~~e~i 168 (297)
T 4eiv_A 90 VNFPEGTGTPDTVSLEAVGALKDGADEIECLIDWRRMNENVADGESRIRLLVSEVKKVVGP-KTLKVVLSGGELQGGDII 168 (297)
T ss_dssp ESTTTCCCCHHHHHHHHHHHHHTTCSEEEEECCTHHHHHCHHHHHHHHHHHHHHHHHHHTT-SEEEEECCSSCCCCHHHH
T ss_pred ecCCCCCCCHHHHHHHHHHHHHcCCCEEEeeeeHHHHhcccCCcHHHHHHHHHHHHHHhcC-CceEEEEecccCCcHHHH
Confidence 799999999999999999999999999999999999999 9999999999999999986 899999999999666668
Q ss_pred HHHHHHHHHcCCCEEEcCCCCC
Q psy965 192 YCASMTAMFAGSDFIKTSGSIQ 213 (214)
Q Consensus 192 ~~A~~ia~~aGaDFIKTSTGf~ 213 (214)
++||++|+++|||||||||||.
T Consensus 169 ~~A~~ia~~AGADFVKTSTGf~ 190 (297)
T 4eiv_A 169 SRAAVAALEGGADFLQTSSGLG 190 (297)
T ss_dssp HHHHHHHHHHTCSEEECCCSSS
T ss_pred HHHHHHHHHhCCCEEEcCCCCC
Confidence 9999999999999999999995
No 2
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=100.00 E-value=3.5e-53 Score=371.69 Aligned_cols=156 Identities=22% Similarity=0.293 Sum_probs=149.6
Q ss_pred HHhhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHH
Q psy965 47 LKIIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLE 125 (214)
Q Consensus 47 ~~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~ 125 (214)
.+++++||||+|+|++|+++|+++|++|+++ |. .+|+||+||+.+++.|+ |++++||+| +|||+|+++++
T Consensus 41 ~~la~~IDhTlL~p~~t~~~I~~lc~eA~~~~~a------aVCV~p~~V~~a~~~L~--gs~v~v~tV-igFP~G~~~~~ 111 (260)
T 3r12_A 41 EDVKSAIEHTNLKPFATPDDIKKLCLEARENRFH------GVCVNPCYVKLAREELE--GTDVKVVTV-VGFPLGANETR 111 (260)
T ss_dssp HHHHHHEEEEECCTTCCHHHHHHHHHHHHHTTCS------EEEECGGGHHHHHHHHT--TSCCEEEEE-ESTTTCCSCHH
T ss_pred HHHHHhcCcccCCCCCCHHHHHHHHHHHHhcCCc------EEEECHHHHHHHHHHhc--CCCCeEEEE-ecCCCCCCcHH
Confidence 4679999999999999999999999999975 65 67999999999999998 899999999 79999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCE
Q psy965 126 TRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 126 ~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDF 205 (214)
+|+.|+++|+++||||||||||+|++++|+|+++++||++++++|++ .+||||||||+| |+++|.+||++|+++||||
T Consensus 112 ~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-t~eei~~A~~ia~eaGADf 189 (260)
T 3r12_A 112 TKAHEAIFAVESGADEIDMVINVGMLKAKEWEYVYEDIRSVVESVKG-KVVKVIIETCYL-DTEEKIAACVISKLAGAHF 189 (260)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHcCCCEEEEEeehhhhccccHHHHHHHHHHHHHhcCC-CcEEEEEeCCCC-CHHHHHHHHHHHHHhCcCE
Confidence 99999999999999999999999999999999999999999999986 899999999999 8899999999999999999
Q ss_pred EEcCCCCC
Q psy965 206 IKTSGSIQ 213 (214)
Q Consensus 206 IKTSTGf~ 213 (214)
|||||||.
T Consensus 190 VKTSTGf~ 197 (260)
T 3r12_A 190 VKTSTGFG 197 (260)
T ss_dssp EECCCSSS
T ss_pred EEcCCCCC
Confidence 99999995
No 3
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=100.00 E-value=4.9e-53 Score=367.09 Aligned_cols=155 Identities=25% Similarity=0.290 Sum_probs=149.1
Q ss_pred HhhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHH
Q psy965 48 KIIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLET 126 (214)
Q Consensus 48 ~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~ 126 (214)
+++++||||+|+|++|+++|+++|++|+++ |. .+|+||+||+.+++.|+ |++++||+| +|||+|++++++
T Consensus 26 ~l~~~IDhTlL~p~~t~~~i~~lc~eA~~~~~~------aVcV~p~~v~~a~~~L~--~s~v~v~tV-igFP~G~~~~~~ 96 (239)
T 3ngj_A 26 TLAKYIDHTLLKADATEEQIRKLCSEAAEYKFA------SVCVNPTWVPLCAELLK--GTGVKVCTV-IGFPLGATPSEV 96 (239)
T ss_dssp HHHTTEEEEECCTTCCHHHHHHHHHHHHHHTCS------EEEECGGGHHHHHHHHT--TSSCEEEEE-ESTTTCCSCHHH
T ss_pred HHHhhcCcccCCCCCCHHHHHHHHHHHHhcCCc------EEEECHHHHHHHHHHhC--CCCCeEEEE-eccCCCCCchHH
Confidence 579999999999999999999999999974 65 67999999999999998 899999999 799999999999
Q ss_pred HHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 127 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
|+.|+++|+++||||||||||+|++++|+|+++++||++++++|++ .+||||||||+| ++++|++||++|+++|||||
T Consensus 97 Kv~Ea~~Ai~~GAdEIDmViNig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L-t~eei~~a~~ia~~aGADfV 174 (239)
T 3ngj_A 97 KAYETKVAVEQGAEEVDMVINIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYL-TNEEKVEVCKRCVAAGAEYV 174 (239)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGS-CHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHcCCCEEEEEeehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCC-CHHHHHHHHHHHHHHCcCEE
Confidence 9999999999999999999999999999999999999999999987 799999999999 88999999999999999999
Q ss_pred EcCCCCC
Q psy965 207 KTSGSIQ 213 (214)
Q Consensus 207 KTSTGf~ 213 (214)
||||||.
T Consensus 175 KTSTGf~ 181 (239)
T 3ngj_A 175 KTSTGFG 181 (239)
T ss_dssp ECCCSSS
T ss_pred ECCCCCC
Confidence 9999995
No 4
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=100.00 E-value=4.2e-53 Score=365.98 Aligned_cols=155 Identities=21% Similarity=0.241 Sum_probs=148.2
Q ss_pred HhhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHH
Q psy965 48 KIIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLET 126 (214)
Q Consensus 48 ~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~ 126 (214)
+++++||||+|+|++|+++|+++|++|+++ |. .+|+||+||+.++ .|+ |++++||+| +|||+|++++++
T Consensus 12 ~l~~~IDhTlL~p~~t~~~i~~lc~eA~~~~~~------aVcV~p~~v~~a~-~l~--~~~v~v~tV-igFP~G~~~~~~ 81 (231)
T 3ndo_A 12 QVAALVDHTLLKPEATPSDVTALVDEAADLGVF------AVCVSPPLVSVAA-GVA--PSGLAIAAV-AGFPSGKHVPGI 81 (231)
T ss_dssp HHHTTEEEECCCTTCCHHHHHHHHHHHHHHTCS------EEEECGGGHHHHH-HHC--CTTCEEEEE-ESTTTCCSCHHH
T ss_pred HHHHhcCcccCCCCCCHHHHHHHHHHHHHhCCc------EEEECHHHHHHHH-Hhc--CCCCeEEEE-ecCCCCCCcHHH
Confidence 579999999999999999999999999974 65 6799999999999 897 899999999 799999999999
Q ss_pred HHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC---CCHHHHHHHHHHHHHcCC
Q psy965 127 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL---KTSENIYCASMTAMFAGS 203 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L---~t~e~i~~A~~ia~~aGa 203 (214)
|+.|+++|+++||||||||||+|++|+|+|+++++||++++++|++ .+||||||||+| .|+++|++||++|+++||
T Consensus 82 K~~E~~~Ai~~GAdEIDmVinig~lk~g~~~~v~~ei~~v~~a~~~-~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGA 160 (231)
T 3ndo_A 82 KATEAELAVAAGATEIDMVIDVGAALAGDLDAVSADITAVRKAVRA-ATLKVIVESAALLEFSGEPLLADVCRVARDAGA 160 (231)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCCEEEEEeehHhhhcccHHHHHHHHHHHHHHccC-CceEEEEECcccCCCCCHHHHHHHHHHHHHHCc
Confidence 9999999999999999999999999999999999999999999986 899999999999 578999999999999999
Q ss_pred CEEEcCCCCC
Q psy965 204 DFIKTSGSIQ 213 (214)
Q Consensus 204 DFIKTSTGf~ 213 (214)
|||||||||.
T Consensus 161 DfVKTSTGf~ 170 (231)
T 3ndo_A 161 DFVKTSTGFH 170 (231)
T ss_dssp SEEECCCSCC
T ss_pred CEEEcCCCCC
Confidence 9999999995
No 5
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=100.00 E-value=5.5e-52 Score=364.43 Aligned_cols=166 Identities=29% Similarity=0.349 Sum_probs=149.7
Q ss_pred HHHHHhhhhhcccCCCCCCCHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCC-CCCeEEEecCCCCCCC
Q psy965 44 SLLLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLV-YQPCLSQPAGFPSGQY 122 (214)
Q Consensus 44 ~~l~~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs-~v~vatV~igFP~G~~ 122 (214)
++.++++++||||+|+|++|+++|+++|++|+++++.. ..+|+||+||+.+++.|++.|+ .++||+| +|||+|++
T Consensus 7 ~~~~~l~~~IDhTlL~p~~t~~~i~~lc~eA~~~~~~~---~aVcV~p~~v~~a~~~L~~~g~~~v~v~tV-igFP~G~~ 82 (260)
T 1p1x_A 7 ASSLRALKLMDLTTLNDDDTDEKVIALCHQAKTPVGNT---AAICIYPRFIPIARKTLKEQGTPEIRIATV-TNFPHGND 82 (260)
T ss_dssp HHHHHHHTTEEEECCCTTCCHHHHHHHHHHTEETTEEC---SEEECCGGGHHHHHHHHHHTTCTTSEEEEE-ESTTTCCS
T ss_pred HHHHHHHHHhchhcCCCCCCHHHHHHHHHHHHhccCCc---eEEEECHHHHHHHHHHhhhcCCCCceEEEE-eCCCCCCC
Confidence 34467899999999999999999999999999752100 2679999999999999973346 7999999 79999999
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC-CceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
++++|++|+++|+++||||||||||+|++++|+|+++++||++++++|++ +.++||||||++|++.|.|++||++|+++
T Consensus 83 ~~~~Kv~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~~ia~ea 162 (260)
T 1p1x_A 83 DIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIKA 162 (260)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHcCCCEEEEeccHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999973 47999999999995544489999999999
Q ss_pred CCCEEEcCCCCC
Q psy965 202 GSDFIKTSGSIQ 213 (214)
Q Consensus 202 GaDFIKTSTGf~ 213 (214)
|||||||||||.
T Consensus 163 GADfVKTSTGf~ 174 (260)
T 1p1x_A 163 GADFIKTSTGKV 174 (260)
T ss_dssp TCSEEECCCSCS
T ss_pred CCCEEEeCCCCC
Confidence 999999999996
No 6
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=100.00 E-value=3.1e-51 Score=363.73 Aligned_cols=157 Identities=20% Similarity=0.337 Sum_probs=149.8
Q ss_pred HHHhhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCH
Q psy965 46 LLKIIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLL 124 (214)
Q Consensus 46 l~~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~ 124 (214)
..+++++||||+|+|++|.++|+++|++|+++ |. .+|++|+||+.+++.|+ +++++||+| +|||+|++++
T Consensus 55 ~~~la~~IDhTlL~p~~T~~dI~~lc~eA~~~g~a------aVCV~P~~V~~a~~~L~--~s~V~V~tV-igFP~G~~~~ 125 (288)
T 3oa3_A 55 VVSIAQIIDHTQLSLSATGSQIDVLCAEAKEYGFA------TVCVRPDYVSRAVQYLQ--GTQVGVTCV-IGFHEGTYST 125 (288)
T ss_dssp GGGGGGGEEEECCCTTCCHHHHHHHHHHHHHHTCS------EEEECGGGHHHHHHHTT--TSSCEEEEE-ESTTTSCSCH
T ss_pred HHHHHHhcCcccCCCCCCHHHHHHHHHHHHhcCCc------EEEECHHHHHHHHHHcC--CCCCeEEEE-eCCCCCCCcH
Confidence 45689999999999999999999999999974 65 67999999999999998 799999999 8999999999
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCC
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 204 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaD 204 (214)
+.|+.|+++|+++||||||||||+|++++|+|+++++||++++++|++ .+||||||+|+| ++++|++||++|+++|||
T Consensus 126 ~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g~~~~v~~eI~~V~~a~~~-~~lKVIlEt~~L-t~eei~~A~~ia~eaGAD 203 (288)
T 3oa3_A 126 DQKVSEAKRAMQNGASELDMVMNYPWLSEKRYTDVFQDIRAVRLAAKD-AILKVILETSQL-TADEIIAGCVLSSLAGAD 203 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHcCCCEEEEEeehhhhcCCcHHHHHHHHHHHHHHhcC-CCceEEEECCCC-CHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999987 589999999999 889999999999999999
Q ss_pred EEEcCCCCC
Q psy965 205 FIKTSGSIQ 213 (214)
Q Consensus 205 FIKTSTGf~ 213 (214)
||||||||.
T Consensus 204 fVKTSTGf~ 212 (288)
T 3oa3_A 204 YVKTSTGFN 212 (288)
T ss_dssp EEECCCSSS
T ss_pred EEEcCCCCC
Confidence 999999995
No 7
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=100.00 E-value=2.5e-51 Score=353.90 Aligned_cols=151 Identities=21% Similarity=0.174 Sum_probs=144.5
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHH
Q psy965 49 IIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETR 127 (214)
Q Consensus 49 ~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K 127 (214)
++++||||+|+|++|.++|+++|++|+++ |. .+|+||+||+.+++.|+ | +++|+| +|||+|++++++|
T Consensus 1 ~~~~iDht~L~p~~t~~~i~~l~~~A~~~~~~------aVcv~p~~v~~a~~~l~--g--v~v~tv-igFP~G~~~~~~k 69 (226)
T 1vcv_A 1 MIHLVDYALLKPYLTVDEAVAGARKAEELGVA------AYCVNPIYAPVVRPLLR--K--VKLCVV-ADFPFGALPTASR 69 (226)
T ss_dssp CGGGEEEECCCTTCCHHHHHHHHHHHHHHTCS------EEEECGGGHHHHGGGCS--S--SEEEEE-ESTTTCCSCHHHH
T ss_pred CcceeeeecCCCCCCHHHHHHHHHHHHHhCCC------EEEECHHHHHHHHHHhC--C--CeEEEE-eCCCCCCCchHHH
Confidence 47899999999999999999999999975 54 67999999999999997 5 999999 7999999999999
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.|+++ +++||||||||||+|++++|+|+++++||++++++|++ .+|||||||++| ++++|++||++|+++||||||
T Consensus 70 ~~E~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~L-t~eei~~a~~ia~eaGADfVK 146 (226)
T 1vcv_A 70 IALVSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYL-RDEERYTLYDIIAEAGAHFIK 146 (226)
T ss_dssp HHHHHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGC-CHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCC-CHHHHHHHHHHHHHcCCCEEE
Confidence 999999 99999999999999999999999999999999999987 799999999999 789999999999999999999
Q ss_pred cCCCCC
Q psy965 208 TSGSIQ 213 (214)
Q Consensus 208 TSTGf~ 213 (214)
|||||.
T Consensus 147 TSTGf~ 152 (226)
T 1vcv_A 147 SSTGFA 152 (226)
T ss_dssp CCCSCC
T ss_pred eCCCCC
Confidence 999996
No 8
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=100.00 E-value=3.9e-51 Score=362.30 Aligned_cols=163 Identities=23% Similarity=0.274 Sum_probs=149.0
Q ss_pred HHHhhhhhcccCCCCCCCHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCC--CCCeEEEecCCCCCCCC
Q psy965 46 LLKIIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLV--YQPCLSQPAGFPSGQYL 123 (214)
Q Consensus 46 l~~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs--~v~vatV~igFP~G~~~ 123 (214)
.++++++||||+|+|++|+++|+++|++|+++++.. ..+|+||+||+.+++.|++.|+ .++||+| +|||+|+.+
T Consensus 29 ~~~l~~~IDhTlL~p~~T~~dI~~lc~eA~~~~~~~---aaVCV~p~~V~~a~~~L~~~gs~~~v~v~tV-igFP~G~~~ 104 (281)
T 2a4a_A 29 AWSVICLTDHTFLDENGTEDDIRELCNESVKTCPFA---AAVCVYPKFVKFINEKIKQEINPFKPKIACV-INFPYGTDS 104 (281)
T ss_dssp HHHHHTTEEEECCCTTCCHHHHHHHHHHHHSSSSCC---SEEEECGGGHHHHHHHHHHHSSSCCSEEEEE-ESTTTCCSC
T ss_pred HHHHHHHcchhcCCCCCCHHHHHHHHHHHHhccCCc---cEEEECHHHHHHHHHHhhccCCCCCceEEEE-eCCCCCCCC
Confidence 357899999999999999999999999999763200 2679999999999999973246 7999999 799999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecChhHhhcCChh---HHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 124 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWP---ELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 124 ~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~---~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
+++|+.|+++|+++||||||||||+|++++|+|+ ++++||++++++|++ .++||||||++|++.|.|++||++|++
T Consensus 105 ~~~Kv~E~~~Av~~GAdEIDmVinig~lksg~~~~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~L~d~e~i~~A~~ia~e 183 (281)
T 2a4a_A 105 MEKVLNDTEKALDDGADEIDLVINYKKIIENTDEGLKEATKLTQSVKKLLTN-KILKVIIEVGELKTEDLIIKTTLAVLN 183 (281)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECCHHHHHHSHHHHHHHHHHHHHHHHTTCTT-SEEEEECCHHHHCSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEEecchHhhhCCChhHHHHHHHHHHHHHHHhcC-CceEEEEecccCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999 999999999999987 899999999999655558999999999
Q ss_pred cCCCEEEcCCCCC
Q psy965 201 AGSDFIKTSGSIQ 213 (214)
Q Consensus 201 aGaDFIKTSTGf~ 213 (214)
+|||||||||||.
T Consensus 184 aGADfVKTSTGf~ 196 (281)
T 2a4a_A 184 GNADFIKTSTGKV 196 (281)
T ss_dssp TTCSEEECCCSCS
T ss_pred hCCCEEEeCCCCC
Confidence 9999999999996
No 9
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=100.00 E-value=1.5e-49 Score=341.36 Aligned_cols=155 Identities=25% Similarity=0.231 Sum_probs=148.1
Q ss_pred HhhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHH
Q psy965 48 KIIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLET 126 (214)
Q Consensus 48 ~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~ 126 (214)
+++++||||+|+|++|.++|+++|++|.++ |. .+|++|.|++.+++.|+ ++++++++| +|||+|++++++
T Consensus 2 ~~~~~iDht~L~p~~t~~~i~~l~~~a~~~~~~------aVcv~p~~v~~~~~~l~--~~~v~v~~v-igFP~G~~~~~~ 72 (220)
T 1ub3_A 2 DLAAHIDHTLLKPTATLEEVAKAAEEALEYGFY------GLCIPPSYVAWVRARYP--HAPFRLVTV-VGFPLGYQEKEV 72 (220)
T ss_dssp CGGGGEEEECCCTTCCHHHHHHHHHHHHHHTCS------EEECCGGGHHHHHHHCT--TCSSEEEEE-ESTTTCCSCHHH
T ss_pred ChHHhcceeccCCCCCHHHHHHHHHHHHHhCCC------EEEECHHHHHHHHHHhC--CCCceEEEE-ecCCCCCCchHH
Confidence 368999999999999999999999999975 55 67999999999999998 789999999 799999999999
Q ss_pred HHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 127 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
|+.|+++|+++||||||||+|+|++++|+|+++++||.+++++|++ .+|||||||++| ++++|.+||++|+++|||||
T Consensus 73 k~~e~~~Ai~~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~-~~lkvIlet~~l-~~e~i~~a~~ia~eaGADfV 150 (220)
T 1ub3_A 73 KALEAALACARGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQ-AVLKVILETGYF-SPEEIARLAEAAIRGGADFL 150 (220)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTT-SEEEEECCGGGS-CHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHcCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcC-CCceEEEecCCC-CHHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999999999999999999999999999999987 699999999999 78999999999999999999
Q ss_pred EcCCCCC
Q psy965 207 KTSGSIQ 213 (214)
Q Consensus 207 KTSTGf~ 213 (214)
||||||.
T Consensus 151 KTsTGf~ 157 (220)
T 1ub3_A 151 KTSTGFG 157 (220)
T ss_dssp ECCCSSS
T ss_pred EeCCCCC
Confidence 9999996
No 10
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=100.00 E-value=1.7e-46 Score=325.21 Aligned_cols=151 Identities=25% Similarity=0.191 Sum_probs=142.6
Q ss_pred HhhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCC-CCCeEEEecCCCCCCCCHH
Q psy965 48 KIIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLV-YQPCLSQPAGFPSGQYLLE 125 (214)
Q Consensus 48 ~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs-~v~vatV~igFP~G~~~~~ 125 (214)
+++.+||||+|+|++|.++|+++|++|.++ |. .+|++|.|+ .+++.|+ |+ ++++|+| +|||+|+++++
T Consensus 19 ~l~~~iDht~L~p~~t~~~i~~l~~~a~~~~~~------aVcv~p~~v-~a~~~l~--~~~~v~v~tv-igFP~G~~~~~ 88 (234)
T 1n7k_A 19 DLASRIDSTLLSPRATEEDVRNLVREASDYGFR------CAVLTPVYT-VKISGLA--EKLGVKLCSV-IGFPLGQAPLE 88 (234)
T ss_dssp HHHTTEEEECCCTTCCHHHHHHHHHHHHHHTCS------EEEECHHHH-HHHHHHH--HHHTCCEEEE-ESTTTCCSCHH
T ss_pred HHHHHhceeccCCCCCHHHHHHHHHHHHHhCCC------EEEEchHHh-eeehHhC--CCCCceEEEE-eCCCCCCCcHH
Confidence 479999999999999999999999999975 55 679999999 9999998 67 8999999 79999999999
Q ss_pred HHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC-CceEEEEEeccCCCCHHHHHHHHHHHHHcCCC
Q psy965 126 TRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTAMFAGSD 204 (214)
Q Consensus 126 ~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaD 204 (214)
+|+.|+++|+++||||||||+|+|++++ ++++||.+++++|++ +.++||||||++| ++++|.+||++|+++|||
T Consensus 89 ~k~~e~~~Av~~GAdEID~vinig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L-~~e~i~~a~ria~eaGAD 163 (234)
T 1n7k_A 89 VKLVEAQTVLEAGATELDVVPHLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLW-DDKTLSLLVDSSRRAGAD 163 (234)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGS-CHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCEEEEeccchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCC-CHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999998 999999999999964 3799999999999 789999999999999999
Q ss_pred EEEcCCCCC
Q psy965 205 FIKTSGSIQ 213 (214)
Q Consensus 205 FIKTSTGf~ 213 (214)
||||||||.
T Consensus 164 fVKTsTG~~ 172 (234)
T 1n7k_A 164 IVKTSTGVY 172 (234)
T ss_dssp EEESCCSSS
T ss_pred EEEeCCCCC
Confidence 999999995
No 11
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=100.00 E-value=1e-36 Score=260.72 Aligned_cols=153 Identities=24% Similarity=0.231 Sum_probs=143.6
Q ss_pred HhhhhhcccCCCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHH
Q psy965 48 KIIEFIDLTTLSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLET 126 (214)
Q Consensus 48 ~~~~~ID~TlL~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~ 126 (214)
+++++||||+|+|++|.++++++|++|+++ |. .+|++|.|++.+++.|. ++++++| +|||+|.+..+.
T Consensus 3 ~~~~~iDht~l~p~~t~~~i~~l~~~a~~~g~~------~v~v~~~~v~~~~~~l~----~v~v~~v-~~~P~g~~~~~~ 71 (225)
T 1mzh_A 3 DVRKYIDNAALKPHLSEKEIEEFVLKSEELGIY------AVCVNPYHVKLASSIAK----KVKVCCV-IGFPLGLNKTSV 71 (225)
T ss_dssp CGGGGEEEEECCTTCCHHHHHHHHHHHHHTTCS------EEEECGGGHHHHHHHCS----SSEEEEE-ESTTTCCSCHHH
T ss_pred chHhhccccccCCCCCHHHHHHHHHHHHHhCCe------EEEECHHHHHHHHHHhc----CCceeeE-ecCCCCccchhh
Confidence 368999999999999999999999999974 54 67999999999998874 6899999 799999999999
Q ss_pred HHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 127 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
|..|+++|+++|||+||||+|+|.+++|+|+.+++|+++++++|++ ..+|+|+|++.| +++++.++++++.++|+|||
T Consensus 72 k~~~~~~A~~~Gad~Id~viN~g~~~~~~~~~~~~~i~~v~~a~~p-v~vKvi~e~~~l-~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 72 KVKEAVEAVRDGAQELDIVWNLSAFKSEKYDFVVEELKEIFRETPS-AVHKVIVETPYL-NEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp HHHHHHHHHHTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHTCTT-SEEEEECCGGGC-CHHHHHHHHHHHHHHTCSEE
T ss_pred hHHHHHHHHHcCCCEEEEEecHHHHhcCChHHHHHHHHHHHHHhcC-ceEEEEEeCCCC-CHHHHHHHHHHHHHhCCCEE
Confidence 9999999999999999999999999999999999999999999984 899999999999 78899999999999999999
Q ss_pred EcCCCCC
Q psy965 207 KTSGSIQ 213 (214)
Q Consensus 207 KTSTGf~ 213 (214)
||||||.
T Consensus 150 ~tstg~~ 156 (225)
T 1mzh_A 150 KTSTGFA 156 (225)
T ss_dssp ECCCSCS
T ss_pred EECCCCC
Confidence 9999983
No 12
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=99.92 E-value=3.1e-26 Score=200.12 Aligned_cols=142 Identities=13% Similarity=-0.023 Sum_probs=127.9
Q ss_pred hhcccC-CCCCC-----CHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCC--CCeEEEecCCCCCCC
Q psy965 52 FIDLTT-LSGDD-----TEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVY--QPCLSQPAGFPSGQY 122 (214)
Q Consensus 52 ~ID~Tl-L~~~~-----T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~--v~vatV~igFP~G~~ 122 (214)
-||||+ |+|.+ |.++++++|++|.++ |. .+|++|.|++.+. ++ +++ ++++++ ++|| |..
T Consensus 22 aiDh~~~~gp~~~~~~~~~~di~~~~~~a~~~~~~------av~v~~~~v~~~~--~~--~~~liv~~~~~-~~~~-g~~ 89 (263)
T 1w8s_A 22 AYDHGIEHGPADFMDNPDSADPEYILRLARDAGFD------GVVFQRGIAEKYY--DG--SVPLILKLNGK-TTLY-NGE 89 (263)
T ss_dssp ECCHHHHTCGGGGSSSGGGGCHHHHHHHHHHHTCS------EEEECHHHHHHHC--CS--SSCEEEECEEC-CTTC-CSS
T ss_pred ECCCCcCcCccccccCcchhhHHHHHHHHHhhCCC------EEEECHHHHHHhh--cC--CCcEEEEEeCC-CCcC-CCC
Confidence 489999 99999 999999999999975 55 6799999999987 55 567 789999 8999 889
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC--------CCHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL--------KTSENIYCA 194 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L--------~t~e~i~~A 194 (214)
+++.|+.++++|++.||++|||++|++ +++++++++|+++++++|+. ..+++|+| +++ .+.+++.++
T Consensus 90 ~~~~~~~~ve~Ai~~Ga~~v~~~~nig---~~~~~~~~~~~~~v~~~~~~-~~~~vIi~-~~~~G~~~~~~~s~~~i~~a 164 (263)
T 1w8s_A 90 PVSVANCSVEEAVSLGASAVGYTIYPG---SGFEWKMFEELARIKRDAVK-FDLPLVVE-SFPRGGKVVNETAPEIVAYA 164 (263)
T ss_dssp CCCEESSCHHHHHHTTCSEEEEEECTT---STTHHHHHHHHHHHHHHHHH-HTCCEEEE-ECCCSTTCCCTTCHHHHHHH
T ss_pred ccchHHHHHHHHHHCCCCEEEEEEecC---CcCHHHHHHHHHHHHHHHHH-cCCeEEEE-eeCCCCccccCCCHHHHHHH
Confidence 999999999999999999999999998 89999999999999999976 56889998 566 166899999
Q ss_pred HHHHHHcCCCEEEcCC
Q psy965 195 SMTAMFAGSDFIKTSG 210 (214)
Q Consensus 195 ~~ia~~aGaDFIKTST 210 (214)
|++|.++|||||||||
T Consensus 165 ~~~a~~~GAD~vkt~~ 180 (263)
T 1w8s_A 165 ARIALELGADAMKIKY 180 (263)
T ss_dssp HHHHHHHTCSEEEEEC
T ss_pred HHHHHHcCCCEEEEcC
Confidence 9999999999999997
No 13
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.47 E-value=3.6e-15 Score=128.56 Aligned_cols=145 Identities=17% Similarity=0.098 Sum_probs=114.0
Q ss_pred hhhhhcccC-CCCCCCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCC----
Q psy965 49 IIEFIDLTT-LSGDDTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQY---- 122 (214)
Q Consensus 49 ~~~~ID~Tl-L~~~~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~---- 122 (214)
++..|||++ |.|..+.+++.++|+.+.++ +. ..|+.|.+++.+++.+. + .+..+ ++||+|..
T Consensus 28 ~~~~id~~~~l~p~~~~~~~~~~~~~~~~~g~~------~i~~~~~~~~~~~~~~~--~---~~~~~-v~~~~~~~~~~d 95 (273)
T 2qjg_A 28 VIVPMDHGVSNGPIKGLIDIRKTVNDVAEGGAN------AVLLHKGIVRHGHRGYG--K---DVGLI-IHLSGGTAISPN 95 (273)
T ss_dssp EEEECCHHHHHCSCTTSSSHHHHHHHHHHHTCS------EEEECHHHHHSCCCSSS--C---CCEEE-EECEECCTTSSS
T ss_pred EEEEcccccccCCCcchhhHHHHHHHHHhcCCC------EEEeCHHHHHHHHHhhc--C---CCCEE-EEEcCCCcCCCC
Confidence 467899999 99999999999999999863 32 45777766654433332 2 45666 79999983
Q ss_pred -CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc--------CCCCHHHHHH
Q psy965 123 -LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG--------ELKTSENIYC 193 (214)
Q Consensus 123 -~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~--------~L~t~e~i~~ 193 (214)
.++.+..++++|++.||+.||+++|.+ +.+++++.+++++++++|+. ..+++|+|++ .+ +.+++..
T Consensus 96 ~~~~~~~~~v~~a~~~Ga~~v~~~l~~~---~~~~~~~~~~~~~v~~~~~~-~g~~viv~~~~~G~~l~~~~-~~~~~~~ 170 (273)
T 2qjg_A 96 PLKKVIVTTVEEAIRMGADAVSIHVNVG---SDEDWEAYRDLGMIAETCEY-WGMPLIAMMYPRGKHIQNER-DPELVAH 170 (273)
T ss_dssp TTCCEECSCHHHHHHTTCSEEEEEEEET---STTHHHHHHHHHHHHHHHHH-HTCCEEEEEEECSTTCSCTT-CHHHHHH
T ss_pred cccchHHHHHHHHHHcCCCEEEEEEecC---CCCHHHHHHHHHHHHHHHHH-cCCCEEEEeCCCCcccCCCC-CHhHHHH
Confidence 234568899999999999999999986 55889999999999999975 4567888872 24 5678888
Q ss_pred HHHHHHHcCCCEEEcCC
Q psy965 194 ASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 194 A~~ia~~aGaDFIKTST 210 (214)
+++.+.++|+|||||+-
T Consensus 171 ~a~~a~~~Gad~i~~~~ 187 (273)
T 2qjg_A 171 AARLGAELGADIVKTSY 187 (273)
T ss_dssp HHHHHHHTTCSEEEECC
T ss_pred HHHHHHHcCCCEEEECC
Confidence 99999999999999983
No 14
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=99.18 E-value=4.3e-11 Score=106.39 Aligned_cols=78 Identities=14% Similarity=0.112 Sum_probs=68.5
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccC----CCCHHHHHHHHHHHHHcCC
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE----LKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~----L~t~e~i~~A~~ia~~aGa 203 (214)
..++++|++.|||+|++++|++ ++++.+..+|+.++++.|+. .-+++|+|+.. ..+.+.+..++++|.++||
T Consensus 128 ~~~ve~Av~~GAdaV~~~i~~G---s~~~~~~l~~i~~v~~~a~~-~GlpvIie~~~G~~~~~d~e~i~~aariA~elGA 203 (295)
T 3glc_A 128 ALSMDDAVRLNSCAVAAQVYIG---SEYEHQSIKNIIQLVDAGMK-VGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGA 203 (295)
T ss_dssp CSCHHHHHHTTCSEEEEEECTT---STTHHHHHHHHHHHHHHHHT-TTCCEEEEECC----CCSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHCCCCEEEEEEECC---CCcHHHHHHHHHHHHHHHHH-cCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCC
Confidence 3589999999999999999998 89999999999999999986 45899999854 1244557789999999999
Q ss_pred CEEEcC
Q psy965 204 DFIKTS 209 (214)
Q Consensus 204 DFIKTS 209 (214)
|||||+
T Consensus 204 D~VKt~ 209 (295)
T 3glc_A 204 QIIKTY 209 (295)
T ss_dssp SEEEEE
T ss_pred CEEEeC
Confidence 999998
No 15
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.88 E-value=8.9e-06 Score=72.15 Aligned_cols=92 Identities=15% Similarity=0.013 Sum_probs=72.3
Q ss_pred HHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCC-----EEEEecChhHhhcCChhH---HHHHHHHHHHH
Q psy965 98 SDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPE---LFSEVKQMKEK 169 (214)
Q Consensus 98 ~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAd-----EID~Vin~~~l~sg~~~~---v~~Ei~~v~~a 169 (214)
++.++ |++++++++ +..+...|..|.+.+...|++ +.|+|+ +|++.+.. +.+.++++++.
T Consensus 138 v~~~~--gt~v~i~~t------Rkt~P~~r~~e~~Av~~GG~~~hr~~l~d~vl----ikdnhi~~~Gti~~ai~~~r~~ 205 (296)
T 1qap_A 138 VGLLA--GTQTQLLDT------RKTLPGLRTALKYAVLCGGGANHRLGLTDAFL----IKENHIIASGSVRQAVEKAFWL 205 (296)
T ss_dssp HHTTT--TSSCEEECC------SCCCTTCHHHHHHHHHHHTCBCCCSSSSSCEE----ECHHHHHHHSSHHHHHHHHHHH
T ss_pred HHHhC--CCCeEEEEe------CCCCcccHHHHHHHHHHCCchhhccccccEEE----EEcCCeeccCCHHHHHHHHHHh
Confidence 34444 677655544 888899999999999999999 999998 44444444 78999999998
Q ss_pred hcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 170 CGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 170 ~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+++ . |+++|+..| +++.+| .++|+|||+++++
T Consensus 206 ~~~--~-kI~vev~tl---ee~~eA----~~aGaD~I~ld~~ 237 (296)
T 1qap_A 206 HPD--V-PVEVEVENL---DELDDA----LKAGADIIMLDNF 237 (296)
T ss_dssp STT--S-CEEEEESSH---HHHHHH----HHTTCSEEEESSC
T ss_pred CCC--C-cEEEEeCCH---HHHHHH----HHcCCCEEEECCC
Confidence 875 4 999999866 677665 4789999999885
No 16
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.85 E-value=3.6e-05 Score=64.29 Aligned_cols=128 Identities=16% Similarity=0.220 Sum_probs=83.8
Q ss_pred CCCCCHH--HHHHHHHHhhcc-Cchhhhcccccc-CcccHHHHHHhhhcCCCCCCeEEEec--CCCCCCCCHHHHHHHHH
Q psy965 59 SGDDTEA--VVETLTLKAIQP-LSEELKEKVLRG-FVSTVWHGSDNLKTKLVYQPCLSQPA--GFPSGQYLLETRLHEIE 132 (214)
Q Consensus 59 ~~~~T~~--~I~~lc~eA~~~-f~~~~~~~~~cv-~P~~V~~a~~~L~~~gs~v~vatV~i--gFP~G~~~~~~K~~E~~ 132 (214)
.|..+++ ++.++++.+.+. .. ..++ .|.+++.+++. +++++..+ + +||.+.........+++
T Consensus 28 ~p~~~~~~~~~~~~a~~~~~~G~~------~i~~~~~~~i~~i~~~-----~~~p~i~~-~~~~~~~~~~~i~~~~~~i~ 95 (234)
T 1yxy_A 28 EPLYSETGGIMPLMAKAAQEAGAV------GIRANSVRDIKEIQAI-----TDLPIIGI-IKKDYPPQEPFITATMTEVD 95 (234)
T ss_dssp STTCCTTCCSHHHHHHHHHHHTCS------EEEEESHHHHHHHHTT-----CCSCEEEE-CBCCCTTSCCCBSCSHHHHH
T ss_pred CCCcCCccchHHHHHHHHHHCCCc------EeecCCHHHHHHHHHh-----CCCCEEee-EcCCCCccccccCChHHHHH
Confidence 4566677 888888887752 22 2233 46666666543 56787665 4 79977665555678899
Q ss_pred HHHHCCCCEEEEecChhHhhcCCh--hHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE-EcC
Q psy965 133 LLAKQKVDEVDIVIQRSLVLNNQW--PELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI-KTS 209 (214)
Q Consensus 133 ~Ai~~GAdEID~Vin~~~l~sg~~--~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI-KTS 209 (214)
.+++.|||.|.+=. . ..++. +.+.+.++.+++.+++ ++++++.. +.++ +..+.++|+||| +|.
T Consensus 96 ~~~~~Gad~V~l~~--~--~~~~~~~~~~~~~i~~i~~~~~~---~~v~~~~~---t~~e----a~~a~~~Gad~i~~~v 161 (234)
T 1yxy_A 96 QLAALNIAVIAMDC--T--KRDRHDGLDIASFIRQVKEKYPN---QLLMADIS---TFDE----GLVAHQAGIDFVGTTL 161 (234)
T ss_dssp HHHTTTCSEEEEEC--C--SSCCTTCCCHHHHHHHHHHHCTT---CEEEEECS---SHHH----HHHHHHTTCSEEECTT
T ss_pred HHHHcCCCEEEEcc--c--ccCCCCCccHHHHHHHHHHhCCC---CeEEEeCC---CHHH----HHHHHHcCCCEEeeec
Confidence 99999999874422 2 22222 3566778888877643 46777765 4455 456788999999 445
Q ss_pred CCC
Q psy965 210 GSI 212 (214)
Q Consensus 210 TGf 212 (214)
.|+
T Consensus 162 ~g~ 164 (234)
T 1yxy_A 162 SGY 164 (234)
T ss_dssp TTS
T ss_pred ccc
Confidence 543
No 17
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.34 E-value=0.00011 Score=64.92 Aligned_cols=82 Identities=18% Similarity=0.097 Sum_probs=67.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCC-----EEEEecChhHhhcCChhH---HHHHHHHHHHHhcCCceEEEEEeccCCCCH
Q psy965 117 FPSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPE---LFSEVKQMKEKCGEKIHMKTILAVGELKTS 188 (214)
Q Consensus 117 FP~G~~~~~~K~~E~~~Ai~~GAd-----EID~Vin~~~l~sg~~~~---v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~ 188 (214)
|..=..+...|..|.+.+...|++ +.|+|+ ++.+++.. +.+.++++++.+++ .+|+++|+..+
T Consensus 139 ~~tRkt~p~~r~~e~~A~~~GG~~~hr~~l~d~vl----ik~nh~~~~g~i~~ai~~~r~~~~~--~~~i~vev~tl--- 209 (294)
T 3c2e_A 139 AGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVM----LKDNHIWATGSITNAVKNARAVCGF--AVKIEVECLSE--- 209 (294)
T ss_dssp ECCSCCCTTCHHHHHHHHHHTTCBCCCCSTTTSEE----ECHHHHHHHSSHHHHHHHHHHHHCT--TSCEEEECSSS---
T ss_pred EecCCCChhHHHHHHHHHHhCCCCceecCccceEE----eecchhhhcCCHHHHHHHHHHhcCc--CCeEEEecCCH---
Confidence 455677789999999999999999 999998 66666666 78899999988874 57999999976
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCC
Q psy965 189 ENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+++.+|+ ++|+|||+++|+
T Consensus 210 ee~~~A~----~aGaD~I~ld~~ 228 (294)
T 3c2e_A 210 DEATEAI----EAGADVIMLDNF 228 (294)
T ss_dssp HHHHHHH----HHTCSEEECCC-
T ss_pred HHHHHHH----HcCCCEEEECCC
Confidence 6776665 479999999884
No 18
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.31 E-value=9.4e-05 Score=65.51 Aligned_cols=82 Identities=17% Similarity=0.078 Sum_probs=65.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCC-----EEEEecChhHhhcCChhHH---HHHHHHHHHHhcCCceEEEEEeccCCCCH
Q psy965 117 FPSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPEL---FSEVKQMKEKCGEKIHMKTILAVGELKTS 188 (214)
Q Consensus 117 FP~G~~~~~~K~~E~~~Ai~~GAd-----EID~Vin~~~l~sg~~~~v---~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~ 188 (214)
|-.=..+...|..|.+.+...|++ +.|+|+ ++.+++..+ .+.++++++.+++ ..|+++|+..+
T Consensus 137 ~~tRkt~p~~r~~e~~A~~~GG~~~hr~~l~d~vl----ik~~Hi~~~g~~~~ai~~~r~~~~~--~~~i~vev~tl--- 207 (299)
T 2jbm_A 137 AGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVM----VKDNHVVAAGGVEKAVRAARQAADF--ALKVEVECSSL--- 207 (299)
T ss_dssp ECCSCCCTTCHHHHHHHHHHTTCBCCCCSTTSSEE----ECHHHHHHHTSHHHHHHHHHHHHTT--TSCEEEEESSH---
T ss_pred eecCCCChhhHHHHHHHHHHCCCCceecCccceEE----ecccHHHHcCCHHHHHHHHHHhCCc--CCeEEEecCCH---
Confidence 344566678999999999999999 999998 566666554 7889999988874 57999999865
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCC
Q psy965 189 ENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+++.+|+ ++|+|||+++|+
T Consensus 208 ee~~~A~----~aGaD~I~ld~~ 226 (299)
T 2jbm_A 208 QEAVQAA----EAGADLVLLDNF 226 (299)
T ss_dssp HHHHHHH----HTTCSEEEEESC
T ss_pred HHHHHHH----HcCCCEEEECCC
Confidence 7776665 589999999884
No 19
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.06 E-value=0.00011 Score=64.13 Aligned_cols=83 Identities=12% Similarity=0.046 Sum_probs=64.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCC-----EEEEecChhHhhcCChhHH---HHHHHHHHHHhcCCceEEEEEeccCCCC
Q psy965 116 GFPSGQYLLETRLHEIELLAKQKVD-----EVDIVIQRSLVLNNQWPEL---FSEVKQMKEKCGEKIHMKTILAVGELKT 187 (214)
Q Consensus 116 gFP~G~~~~~~K~~E~~~Ai~~GAd-----EID~Vin~~~l~sg~~~~v---~~Ei~~v~~a~~~~~~lKvIlEt~~L~t 187 (214)
-|-.=..+...|..|.+.+...|++ +.|+|+ ++.+++..+ .+.++++++.+++ .+|+++|+..+
T Consensus 121 ~~~tRkt~p~~r~~~~~A~~~gG~~~hr~~l~d~vl----ik~~Hi~~~g~~~~ai~~~r~~~~~--~~~i~vev~tl-- 192 (273)
T 2b7n_A 121 LLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALM----LKDTHLRHVKDLKSFLTHARKNLPF--TAKIEIECESF-- 192 (273)
T ss_dssp EECCSCCCTTCHHHHHHHHHTTTCCCCCSSTTTCEE----ECHHHHTTCSSHHHHHHHHGGGSCT--TCCEEEEESSH--
T ss_pred EEEcCCCChhhHHHHHHHHHhCCCcceEcCccceEE----eeCCHHHHhCCHHHHHHHHHHhCCC--CceEEEEcCCH--
Confidence 3556677789999999999999999 999998 455555443 7788888877663 57999999855
Q ss_pred HHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 188 SENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 188 ~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+++.+|. ++|+|||+++|+
T Consensus 193 -ee~~~A~----~aGaD~I~ld~~ 211 (273)
T 2b7n_A 193 -EEAKNAM----NAGADIVMCDNL 211 (273)
T ss_dssp -HHHHHHH----HHTCSEEEEETC
T ss_pred -HHHHHHH----HcCCCEEEECCC
Confidence 7776665 579999999884
No 20
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=96.34 E-value=0.0094 Score=52.59 Aligned_cols=138 Identities=9% Similarity=-0.004 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCC---HHH--H---HHHHHHH
Q psy965 63 TEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYL---LET--R---LHEIELL 134 (214)
Q Consensus 63 T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~---~~~--K---~~E~~~A 134 (214)
-..++++++.++..+-. ..+-..|-+...+...-.....++. -+ +..|.+..- +.. - -.+++.|
T Consensus 46 ~l~~~k~lv~~~~~~~~-----~avl~~~g~~~~a~~~~~~~~~~~g--li-l~l~~~~~l~~~~~~~~l~~~~~~ve~a 117 (304)
T 1to3_A 46 VLTDFKVNAAKILSPYA-----SAVLLDQQFCYRQAVEQNAVAKSCA--MI-VAADDFIPGNGIPVDNVVLDKKINAQAV 117 (304)
T ss_dssp HHHHHHHHHHHHHGGGC-----SEEEECTTTTHHHHHHTTCSCTTSE--EE-EECEEEEEETTEEEEEEEECSSCCHHHH
T ss_pred hhhhHHHHHHHHHhcCC-----CEEEeCHHHHHHHhhcccccCCCCc--EE-EEECCCCCCCCCccchhhccCchhHHHH
Confidence 35889999999986411 1123356777654431100012222 22 233221110 001 1 2688999
Q ss_pred HHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc----CCC---CH-HHHHHHHHHHHHcCCCEE
Q psy965 135 AKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG----ELK---TS-ENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 135 i~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~----~L~---t~-e~i~~A~~ia~~aGaDFI 206 (214)
++.|||-+=+-++++ ...+-..-++++.++.+.|+. .-+.+|+|.- .+. +. +.+..+.+.+.+.|+|||
T Consensus 118 ~~~GAdaV~vlv~~~--~d~~~~~~~~~i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~i 194 (304)
T 1to3_A 118 KRDGAKALKLLVLWR--SDEDAQQRLNMVKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLY 194 (304)
T ss_dssp HHTTCCEEEEEEEEC--TTSCHHHHHHHHHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEE
T ss_pred HHcCCCEEEEEEEcC--CCccHHHHHHHHHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEE
Confidence 999999998888888 333357888999999999976 4577888863 232 23 678888999999999999
Q ss_pred EcCCC
Q psy965 207 KTSGS 211 (214)
Q Consensus 207 KTSTG 211 (214)
|+..+
T Consensus 195 Kv~~~ 199 (304)
T 1to3_A 195 KVEMP 199 (304)
T ss_dssp EECCG
T ss_pred EeCCC
Confidence 98763
No 21
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=95.50 E-value=0.034 Score=49.57 Aligned_cols=145 Identities=13% Similarity=0.121 Sum_probs=92.4
Q ss_pred hhhhccc-------CCCCC---CCHHHHHHHHHHhhcc-CchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecC--
Q psy965 50 IEFIDLT-------TLSGD---DTEAVVETLTLKAIQP-LSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAG-- 116 (214)
Q Consensus 50 ~~~ID~T-------lL~~~---~T~~~I~~lc~eA~~~-f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~ig-- 116 (214)
+=-+||- ...|. .-.+.++++|....++ .. .+...|-.++.. -+|.....++.+++..-|
T Consensus 46 Iva~DH~arg~lgv~~~p~~m~~~~~~l~~~~~~~~~~Gvd------avl~~~gi~~d~-~Li~~L~~~tv~gs~~~ggl 118 (307)
T 3fok_A 46 IVAADHPARGALAVGDNETAMANRYELLERMAIALSRPGVD------GVLGTPDIIDDL-AALGLLDDKIVVGSMNRGGL 118 (307)
T ss_dssp EEECCSGGGTCCCSSSSSSSSSCHHHHHHHHHHHHHSTTCC------EEEECHHHHHHH-HHTTCCTTCEEEEECCCCSC
T ss_pred EEECCCCccccCccCCCccccccHHHHHHHHHHHHhccCCC------EEEECcchhhcc-cceEEecCcccccccCcccc
Confidence 4447993 23333 5678899999988765 22 223355555443 233322233333333111
Q ss_pred ----CCCCCCCHHHHHHHHHHHHHCCCCEEE--EecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe--c------
Q psy965 117 ----FPSGQYLLETRLHEIELLAKQKVDEVD--IVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA--V------ 182 (214)
Q Consensus 117 ----FP~G~~~~~~K~~E~~~Ai~~GAdEID--~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE--t------ 182 (214)
||.-...+. ..+++|++.|||-+= +-+|+| +..-..-.+++.++++.|+. .-+=+++| .
T Consensus 119 ~g~~~~~d~~~~~---~sVe~AvrlGADaV~~l~~i~~G---s~~e~~~l~~la~vv~ea~~-~GlP~~~ep~~y~r~gg 191 (307)
T 3fok_A 119 RGASFEMDDRYTG---YNVSSMVDRGVDFAKTLVRINLS---DAGTAPTLEATAHAVNEAAA-AQLPIMLEPFMSNWVNG 191 (307)
T ss_dssp TTCTTTTSCCCCS---CCHHHHHHHTCCEEEEEEEECTT---CTTHHHHHHHHHHHHHHHHH-TTCCEEEEEEEEEEETT
T ss_pred ccCCCCccccccc---cCHHHHHHCCCCEEEEEEEECCC---ChhHHHHHHHHHHHHHHHHH-cCCcEEEEeeccccCCC
Confidence 665443333 278899999999988 447776 33446777899999998864 33455555 1
Q ss_pred ---cCCCCHHHHHHHHHHHHHcCCC----EEEcC
Q psy965 183 ---GELKTSENIYCASMTAMFAGSD----FIKTS 209 (214)
Q Consensus 183 ---~~L~t~e~i~~A~~ia~~aGaD----FIKTS 209 (214)
... +.+.+..+++++.+.||| +|||.
T Consensus 192 ~v~~~~-dp~~Va~aaRiAaELGADs~~tivK~~ 224 (307)
T 3fok_A 192 KVVNDL-STDAVIQSVAIAAGLGNDSSYTWMKLP 224 (307)
T ss_dssp EEEECC-SHHHHHHHHHHHHTCSSCCSSEEEEEE
T ss_pred CcCCCC-CHHHHHHHHHHHHHhCCCcCCCEEEeC
Confidence 123 678999999999999999 99983
No 22
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=95.29 E-value=0.083 Score=45.63 Aligned_cols=86 Identities=5% Similarity=-0.026 Sum_probs=60.4
Q ss_pred CCHHHHHHHHHHHHHCCCC-EEEEecChhH-----hhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQKVD-EVDIVIQRSL-----VLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCAS 195 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAd-EID~Vin~~~-----l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~ 195 (214)
...+.=..-++.+.+.|+| -|++=++-.. -..++.+.+.+-+++++++++-+..+|+ .+.+ +.+++.+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi---~~~~-~~~~~~~~a 178 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKL---PPYF-DLVHFDIMA 178 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEE---CCCC-SHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEE---CCCC-CHHHHHHHH
Confidence 3455556667777789999 7777442111 1234778888888888887653356775 3446 778888889
Q ss_pred HHHHHcCCCEEEcCCC
Q psy965 196 MTAMFAGSDFIKTSGS 211 (214)
Q Consensus 196 ~ia~~aGaDFIKTSTG 211 (214)
+.+.++|+|+|..+..
T Consensus 179 ~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 179 EILNQFPLTYVNSVNS 194 (311)
T ss_dssp HHHTTSCCCEEEECCC
T ss_pred HHHHHcCCcEEEecCC
Confidence 9999999999987643
No 23
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=95.25 E-value=0.12 Score=46.14 Aligned_cols=101 Identities=14% Similarity=0.073 Sum_probs=66.5
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecC----------hhHhhcCChhHHHHHHHHHHHHhcCCce
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQ----------RSLVLNNQWPELFSEVKQMKEKCGEKIH 175 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin----------~~~l~sg~~~~v~~Ei~~v~~a~~~~~~ 175 (214)
.+.+++.- ++ |..+ +.=..-++.+.+.|+|+||+-.. +|.-+..+.+.+.+-+++++++++-+..
T Consensus 56 ~~~p~~vQ-L~---g~~p-~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~ 130 (350)
T 3b0p_A 56 EEHPIALQ-LA---GSDP-KSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVT 130 (350)
T ss_dssp GGCSEEEE-EE---CSCH-HHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEE
T ss_pred CCCeEEEE-eC---CCCH-HHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceE
Confidence 34566666 33 4443 44444566777899999998752 2445567888999999999998853344
Q ss_pred EEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 176 MKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 176 lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+|+=+-.....+.++....++.+.++|+|+|..+.+
T Consensus 131 vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 131 VKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp EEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred EEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecC
Confidence 444322222224456777888899999999987653
No 24
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.43 E-value=0.27 Score=44.24 Aligned_cols=67 Identities=22% Similarity=0.331 Sum_probs=48.7
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++.+++.|+|-| ++|.+ .|+.+.+.+.++.+++..+ ++||+-+. .|.++ ++.+.++|+|||+
T Consensus 107 ~e~a~~l~eaGad~I--~ld~a---~G~~~~~~~~i~~i~~~~~----~~Vivg~v--~t~e~----A~~l~~aGaD~I~ 171 (361)
T 3khj_A 107 IERAKLLVEAGVDVI--VLDSA---HGHSLNIIRTLKEIKSKMN----IDVIVGNV--VTEEA----TKELIENGADGIK 171 (361)
T ss_dssp HHHHHHHHHTTCSEE--EECCS---CCSBHHHHHHHHHHHHHCC----CEEEEEEE--CSHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCcCeE--EEeCC---CCCcHHHHHHHHHHHHhcC----CcEEEccC--CCHHH----HHHHHHcCcCEEE
Confidence 667889999999975 45644 3677888888999888653 56676322 35444 4567789999999
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
.+
T Consensus 172 VG 173 (361)
T 3khj_A 172 VG 173 (361)
T ss_dssp EC
T ss_pred Ee
Confidence 85
No 25
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.01 E-value=0.16 Score=43.88 Aligned_cols=95 Identities=12% Similarity=0.112 Sum_probs=64.4
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCC---EEEEecChhHh-----hcCChhHHHHHHHHHHHHhcCCceEEE
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVD---EVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGEKIHMKT 178 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAd---EID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~~~~lKv 178 (214)
+.++..- ++ | ...+.=..-++.+.+.|+| .|++=+.-... ..++.+.+.+-+++++++++-+..+|+
T Consensus 93 ~~p~~~~-i~---g-~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~ 167 (314)
T 2e6f_A 93 KKPLFLS-IS---G-LSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM 167 (314)
T ss_dssp TCCEEEE-EC---C-SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CCcEEEE-eC---C-CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 5666655 22 3 3445555566667778888 77764321122 234778888999999998853466775
Q ss_pred EEeccCCCCHHHHHHHHHHHHHcC-CCEEEcCC
Q psy965 179 ILAVGELKTSENIYCASMTAMFAG-SDFIKTSG 210 (214)
Q Consensus 179 IlEt~~L~t~e~i~~A~~ia~~aG-aDFIKTST 210 (214)
.+.+ +.+++.+.++.+.++| +|||..+.
T Consensus 168 ---~~~~-~~~~~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 168 ---PPYF-DIAHFDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp ---CCCC-CHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred ---CCCC-CHHHHHHHHHHHHhcCCceEEEEeC
Confidence 4446 6788888899999999 99998664
No 26
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.89 E-value=1.4 Score=37.71 Aligned_cols=139 Identities=12% Similarity=-0.044 Sum_probs=86.2
Q ss_pred CCCCCHHHHHHHHHHhhc-cCchhhhccccccCcccHH---HHH---HhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHH
Q psy965 59 SGDDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVW---HGS---DNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEI 131 (214)
Q Consensus 59 ~~~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~---~a~---~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~ 131 (214)
....+.++..++++...+ .+..- .....+.|.|+| ... +.+.+ ..++++++. + |. ...+
T Consensus 20 ~~~~~~e~k~~i~~~L~~~Gv~~I--E~g~~~~~~~~p~~~~~~e~~~~i~~-~~~~~v~~l-~--~n--------~~~i 85 (295)
T 1ydn_A 20 KRFVPTADKIALINRLSDCGYARI--EATSFVSPKWVPQLADSREVMAGIRR-ADGVRYSVL-V--PN--------MKGY 85 (295)
T ss_dssp SSCCCHHHHHHHHHHHTTTTCSEE--EEEECSCTTTCGGGTTHHHHHHHSCC-CSSSEEEEE-C--SS--------HHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCcCEE--EEccCcCccccccccCHHHHHHHHHh-CCCCEEEEE-e--CC--------HHHH
Confidence 335788999999998875 23200 000122355444 223 33332 246787766 3 32 4678
Q ss_pred HHHHHCCCCEEEEecChhH--h---hcCChhHHHHHHHHHHHHhcCCceEEEEEeccC--------CCCHHHHHHHHHHH
Q psy965 132 ELLAKQKVDEVDIVIQRSL--V---LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE--------LKTSENIYCASMTA 198 (214)
Q Consensus 132 ~~Ai~~GAdEID~Vin~~~--l---~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~--------L~t~e~i~~A~~ia 198 (214)
+.|++.|+++|-+.+..+. . +....++..+.++.+++.++. .-++|-.+.+. -.+.+.+.+.++.+
T Consensus 86 ~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~ 164 (295)
T 1ydn_A 86 EAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAIN-DGLAIRGYVSCVVECPYDGPVTPQAVASVTEQL 164 (295)
T ss_dssp HHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECSSEETTTEECCHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH-cCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHH
Confidence 8999999999988754331 1 134667777888887777764 33455433222 33788899999999
Q ss_pred HHcCCCEE--EcCCCC
Q psy965 199 MFAGSDFI--KTSGSI 212 (214)
Q Consensus 199 ~~aGaDFI--KTSTGf 212 (214)
.+.|+|.| +++.|.
T Consensus 165 ~~~G~d~i~l~Dt~G~ 180 (295)
T 1ydn_A 165 FSLGCHEVSLGDTIGR 180 (295)
T ss_dssp HHHTCSEEEEEETTSC
T ss_pred HhcCCCEEEecCCCCC
Confidence 99999985 555664
No 27
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=93.21 E-value=0.29 Score=43.88 Aligned_cols=134 Identities=11% Similarity=0.044 Sum_probs=77.5
Q ss_pred CHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEec------CCCCCCCCHHHHHHHHHHHHH
Q psy965 63 TEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPA------GFPSGQYLLETRLHEIELLAK 136 (214)
Q Consensus 63 T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~i------gFP~G~~~~~~K~~E~~~Ai~ 136 (214)
.-.++++++.++..+.. ..+-+.|.|-..+.... ..+..+..- . +|+.|..+-..-.--+++|++
T Consensus 51 ~l~~~K~lv~~~~~~~a-----saILlD~~~G~~a~~~~---~~~~GLii~-~E~~G~~~~~~gr~p~~l~~~sve~a~~ 121 (332)
T 3iv3_A 51 QMEELKVLVSEELTPYA-----SSILLDPEYGLPAAQAR---DREAGLLLA-YEKTGYDANTTSRLPDCLVDWSIKRLKE 121 (332)
T ss_dssp HHHHHHHHHHHHHGGGS-----SEEEECTTTCHHHHHTS---CTTCEEEEE-CBCCCCCTTSSCCCCCBCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCC-----cEEEEchhhCHHHhccc---cCCCcEEEE-eccCCCCcCCCCCCCccccccCHHHHHH
Confidence 45667788888876422 11233454433233222 122222111 1 455564432222345899999
Q ss_pred CCCCEEEEecChhHhhcCChh----HHHHHHHHHHHHhcCCceEEEEEec---cC----CCC-------HHHHHHHHHHH
Q psy965 137 QKVDEVDIVIQRSLVLNNQWP----ELFSEVKQMKEKCGEKIHMKTILAV---GE----LKT-------SENIYCASMTA 198 (214)
Q Consensus 137 ~GAdEID~Vin~~~l~sg~~~----~v~~Ei~~v~~a~~~~~~lKvIlEt---~~----L~t-------~e~i~~A~~ia 198 (214)
.|||-+=+-+|++. .+-. .-.+.+..+.+.|.. --+=+++|. +. -.+ ++.+..+++++
T Consensus 122 ~GADAVk~lv~~g~---d~~~e~~~~q~~~l~rv~~ec~~-~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~ 197 (332)
T 3iv3_A 122 AGADAVKFLLYYDV---DGDPQVNVQKQAYIERIGSECQA-EDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVF 197 (332)
T ss_dssp TTCSEEEEEEEECT---TSCHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHH
T ss_pred cCCCEEEEEEEcCC---CchHHHHHHHHHHHHHHHHHHHH-cCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHH
Confidence 99999999999974 2222 345677888888864 223444544 21 112 34488899999
Q ss_pred --HHcCCCEEEcC
Q psy965 199 --MFAGSDFIKTS 209 (214)
Q Consensus 199 --~~aGaDFIKTS 209 (214)
.+.|+|.+||.
T Consensus 198 ~~~elGaDv~Kve 210 (332)
T 3iv3_A 198 SAERFGIDVLKVE 210 (332)
T ss_dssp TSGGGCCSEEEEC
T ss_pred hhcCcCCcEEEEe
Confidence 66799999996
No 28
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=92.72 E-value=0.43 Score=43.96 Aligned_cols=70 Identities=19% Similarity=0.234 Sum_probs=51.2
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++++++.|++-|.+-.+ .|++....+.|+.+++.+++ +.||+..+ + +.++. +.+.++|+|||+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~-----~G~~~~~~e~i~~i~~~~p~---~pvi~g~~-~-t~e~a----~~l~~~G~d~I~ 304 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTA-----HGHSRRVIETLEMIKADYPD---LPVVAGNV-A-TPEGT----EALIKAGADAVK 304 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCS-----CCSSHHHHHHHHHHHHHCTT---SCEEEEEE-C-SHHHH----HHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCEEEEEec-----CCchHHHHHHHHHHHHHCCC---ceEEeCCc-C-CHHHH----HHHHHcCCCEEE
Confidence 34788899999999777544 36777888999999998864 34555433 3 65554 566789999999
Q ss_pred cCCC
Q psy965 208 TSGS 211 (214)
Q Consensus 208 TSTG 211 (214)
.|.|
T Consensus 305 v~~~ 308 (494)
T 1vrd_A 305 VGVG 308 (494)
T ss_dssp ECSS
T ss_pred EcCC
Confidence 8664
No 29
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=91.44 E-value=0.61 Score=42.11 Aligned_cols=70 Identities=16% Similarity=0.104 Sum_probs=47.1
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++.+++.|+|-|.+ |... |..+.+.+.|+.+++..++ ++||.-+ ..|.++ ++.++++|+|+|+
T Consensus 102 ~e~~~~a~~aGvdvI~i--d~a~---G~~~~~~e~I~~ir~~~~~---~~Vi~G~--V~T~e~----A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCV--DVAH---AHAKYVGKTLKSLRQLLGS---RCIMAGN--VATYAG----ADYLASCGADIIK 167 (361)
T ss_dssp HHHHHHHHHTTCCEEEE--ECSC---CSSHHHHHHHHHHHHHHTT---CEEEEEE--ECSHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEE--eCCC---CCcHhHHHHHHHHHHhcCC---CeEEEcC--cCCHHH----HHHHHHcCCCEEE
Confidence 44688899999995433 3221 4456677889999987754 5666632 125444 5677899999999
Q ss_pred cCCC
Q psy965 208 TSGS 211 (214)
Q Consensus 208 TSTG 211 (214)
.|.|
T Consensus 168 Vg~g 171 (361)
T 3r2g_A 168 AGIG 171 (361)
T ss_dssp ECCS
T ss_pred EcCC
Confidence 7643
No 30
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=90.44 E-value=1.3 Score=38.34 Aligned_cols=139 Identities=12% Similarity=-0.059 Sum_probs=86.4
Q ss_pred CCCCCHHHHHHHHHHhhc-cCchhhhccccccCcccHHH------HHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHH
Q psy965 59 SGDDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVWH------GSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEI 131 (214)
Q Consensus 59 ~~~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~~------a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~ 131 (214)
.-..+.++..++++...+ .++. ......++|.+++. ..+.+.+ ..+++++.. + | ....+
T Consensus 24 ~~~~~~e~k~~i~~~L~~~Gv~~--IE~g~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~~~l-~--~--------~~~~i 89 (302)
T 2ftp_A 24 KQPIEVADKIRLVDDLSAAGLDY--IEVGSFVSPKWVPQMAGSAEVFAGIRQ-RPGVTYAAL-A--P--------NLKGF 89 (302)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCSE--EEEEECSCTTTCGGGTTHHHHHHHSCC-CTTSEEEEE-C--C--------SHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCcCE--EEECCCcCccccccccCHHHHHHHhhh-cCCCEEEEE-e--C--------CHHHH
Confidence 335677888887777664 2220 00001223432222 2233332 356777766 3 3 24689
Q ss_pred HHHHHCCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcCCceEEEEEeccC--------CCCHHHHHHHHHHH
Q psy965 132 ELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE--------LKTSENIYCASMTA 198 (214)
Q Consensus 132 ~~Ai~~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~--------L~t~e~i~~A~~ia 198 (214)
+.|++.|++.|-+....+.+ +...+++..+.++.+++.++. .-++|-.|.+. ..+.+.+.+.++.+
T Consensus 90 ~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~-~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~ 168 (302)
T 2ftp_A 90 EAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ-HQVRVRGYISCVLGCPYDGDVDPRQVAWVAREL 168 (302)
T ss_dssp HHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH-TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHH
T ss_pred HHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH-CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHH
Confidence 99999999999987666443 345788888999999888864 23455433332 23678888999999
Q ss_pred HHcCCCEE--EcCCCC
Q psy965 199 MFAGSDFI--KTSGSI 212 (214)
Q Consensus 199 ~~aGaDFI--KTSTGf 212 (214)
.++|+|-| +++.|.
T Consensus 169 ~~~G~d~i~l~DT~G~ 184 (302)
T 2ftp_A 169 QQMGCYEVSLGDTIGV 184 (302)
T ss_dssp HHTTCSEEEEEESSSC
T ss_pred HHcCCCEEEEeCCCCC
Confidence 99999974 555554
No 31
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=90.42 E-value=3.8 Score=38.25 Aligned_cols=67 Identities=22% Similarity=0.391 Sum_probs=48.3
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++..++.|++-|.+-.. .|+...+.+-|+.+++..++ +.+|. +...+.+. ++.+.++|+|+|+
T Consensus 258 ~era~aLveaGvd~I~Id~a-----~g~~~~v~~~i~~i~~~~~~---~~vi~--g~v~t~e~----a~~~~~aGad~i~ 323 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTA-----HGHSQGVIDKVKEVRAKYPS---LNIIA--GNVATAEA----TKALIEAGANVVK 323 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECS-----CTTSHHHHHHHHHHHHHCTT---SEEEE--EEECSHHH----HHHHHHHTCSEEE
T ss_pred HHHHHHHHhhccceEEeccc-----ccchhhhhhHHHHHHHhCCC---ceEEe--eeeccHHH----HHHHHHhCCCEEE
Confidence 56678889999998776654 46788899999999987754 34443 22335433 5677889999999
Q ss_pred c
Q psy965 208 T 208 (214)
Q Consensus 208 T 208 (214)
-
T Consensus 324 v 324 (511)
T 3usb_A 324 V 324 (511)
T ss_dssp E
T ss_pred E
Confidence 5
No 32
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=90.29 E-value=0.72 Score=39.28 Aligned_cols=91 Identities=13% Similarity=0.024 Sum_probs=55.2
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHH--CCCCEEEEecChhHh------hcCChhHHHHHHHHHHHHhcCCceEEE
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAK--QKVDEVDIVIQRSLV------LNNQWPELFSEVKQMKEKCGEKIHMKT 178 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~--~GAdEID~Vin~~~l------~sg~~~~v~~Ei~~v~~a~~~~~~lKv 178 (214)
+.++..- ++-+ ..+ ...++...+. .|+|.|++-++.... ..++.+.+.+-++++++.++-+..+|+
T Consensus 98 ~~p~~v~-l~~~----~~~-~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~ 171 (311)
T 1ep3_A 98 ELPIIAN-VAGS----EEA-DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKL 171 (311)
T ss_dssp TSCEEEE-ECCS----SHH-HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEE
T ss_pred CCcEEEE-EcCC----CHH-HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 5666655 3322 233 3444444444 899988875543222 224677888888999987753355665
Q ss_pred EEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 179 ILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 179 IlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.. .+.+ +...++.+.++|+|+|..+
T Consensus 172 ~~---~~~~---~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 172 SP---NVTD---IVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp CS---CSSC---SHHHHHHHHHTTCSEEEEC
T ss_pred CC---ChHH---HHHHHHHHHHcCCCEEEEe
Confidence 42 2323 3344667889999999974
No 33
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=89.96 E-value=2.3 Score=36.98 Aligned_cols=69 Identities=16% Similarity=0.060 Sum_probs=47.3
Q ss_pred HCCCCEEEEec---Ch--hHhhcCChhHHHHHHHHHHHHh---------cCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 136 KQKVDEVDIVI---QR--SLVLNNQWPELFSEVKQMKEKC---------GEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 136 ~~GAdEID~Vi---n~--~~l~sg~~~~v~~Ei~~v~~a~---------~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
..|+|-|++=+ |. .... .+.+.+.+-++++++++ +-+..+|+ ++.+ +.+++...++.+.++
T Consensus 163 ~~g~d~iein~~sP~~~g~~~~-~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi---~~~~-~~~~~~~~a~~l~~~ 237 (336)
T 1f76_A 163 YAYAGYIAINISSPNTPGLRTL-QYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI---APDL-SEEELIQVADSLVRH 237 (336)
T ss_dssp GGGCSEEEEECCCSSSTTGGGG-GSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEEC---CSCC-CHHHHHHHHHHHHHT
T ss_pred hccCCEEEEEccCCCCCCcccc-cCHHHHHHHHHHHHHHHHhhhhcccccCceEEEe---cCCC-CHHHHHHHHHHHHHc
Confidence 35899887744 21 1122 24666777888888887 22356673 4556 677888899999999
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|+|+|.-|
T Consensus 238 Gvd~i~vs 245 (336)
T 1f76_A 238 NIDGVIAT 245 (336)
T ss_dssp TCSEEEEC
T ss_pred CCcEEEEe
Confidence 99999854
No 34
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=89.74 E-value=1.8 Score=36.28 Aligned_cols=83 Identities=12% Similarity=0.103 Sum_probs=49.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecChh---------------HhhcC-ChhHHHHHHHHHHHHhcCCceEEEEEec
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQRS---------------LVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAV 182 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~---------------~l~sg-~~~~v~~Ei~~v~~a~~~~~~lKvIlEt 182 (214)
.|....+.....++.+.+.|||-|.+-++.+ ++..| +.+...+.++++++..+ .+ +++-
T Consensus 26 ~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~--~P--v~~m- 100 (262)
T 1rd5_A 26 AGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELS--CP--VVLL- 100 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCS--SC--EEEE-
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC--CC--EEEE-
Confidence 3444467888889999999999988866543 12222 45667888888887533 34 4442
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 183 GELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 183 ~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.+. +.... ...+.+.++|+|.|=.
T Consensus 101 ~~~-~~~~~-~~~~~a~~aGadgv~v 124 (262)
T 1rd5_A 101 SYY-KPIMF-RSLAKMKEAGVHGLIV 124 (262)
T ss_dssp CCS-HHHHS-CCTHHHHHTTCCEEEC
T ss_pred ecC-cHHHH-HHHHHHHHcCCCEEEE
Confidence 233 21110 0112288899997643
No 35
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=89.68 E-value=1.8 Score=38.23 Aligned_cols=82 Identities=7% Similarity=0.099 Sum_probs=55.8
Q ss_pred HHHHHHHHCCCCEEEEecChhHhh----cC---------------ChhHHHHHHHHHHHHhcCCceEEEEEecc-----C
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVL----NN---------------QWPELFSEVKQMKEKCGEKIHMKTILAVG-----E 184 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~----sg---------------~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~-----~ 184 (214)
.-++.|.+.|.|-|++=.--|+|+ |- +...+.+=+++|++++++..++-|=|-.. -
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 346778889999999877665553 11 12345667788999987534444333321 2
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 185 LKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+ +.++....++...++|+|||--|.|
T Consensus 236 ~-~~~~~~~la~~L~~~Gvd~i~vs~g 261 (349)
T 3hgj_A 236 W-SLEDTLAFARRLKELGVDLLDCSSG 261 (349)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEEecC
Confidence 4 5677778888889999999998854
No 36
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=89.67 E-value=1.5 Score=40.36 Aligned_cols=142 Identities=8% Similarity=-0.028 Sum_probs=86.2
Q ss_pred hhhhcccC------CCCCCCHHHHHHHHHHhhc-cCchhhhccccccCcccHHH---HHHhhhcCCCCCCeEEEecCCCC
Q psy965 50 IEFIDLTT------LSGDDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVWH---GSDNLKTKLVYQPCLSQPAGFPS 119 (214)
Q Consensus 50 ~~~ID~Tl------L~~~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~~---a~~~L~~~gs~v~vatV~igFP~ 119 (214)
+..+|-|+ +....|.++-.++.+.-.. .+. ..-..+|.+.+. +.+.+.+.+...++++.+ -|
T Consensus 40 V~I~DtTLRDG~Q~~~~~~s~eeKl~Ia~~L~~~Gv~-----~IEvG~P~asp~d~~~~~~i~~~~~~~~v~~~~--r~- 111 (423)
T 3ivs_A 40 FSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVD-----YIELTSPVASEQSRQDCEAICKLGLKCKILTHI--RC- 111 (423)
T ss_dssp CEEEECTTTGGGGSTTCCCCHHHHHHHHHHHHHHTCS-----EEEECCTTSCHHHHHHHHHHHTSCCSSEEEEEE--ES-
T ss_pred EEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHcCCC-----EEEEeecccCHHHHHHHHHHHhcCCCCEEEEee--cc-
Confidence 44566664 3445677777777666443 222 111345665554 233343223344444431 11
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcC-CceEEEEEeccCCCCHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~L~t~e~i~~ 193 (214)
....++.|++.|+++|-+++..+.. +..+.+++.+.+..+++.+.. +..+-+-+|.+.-.+.+.+.+
T Consensus 112 -------~~~di~~A~~aG~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~ 184 (423)
T 3ivs_A 112 -------HMDDARVAVETGVDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLS 184 (423)
T ss_dssp -------CHHHHHHHHHTTCSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHH
T ss_pred -------ChhhHHHHHHcCCCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHH
Confidence 1345788999999999999876653 345677888888888877754 345666678877667788889
Q ss_pred HHHHHHHcCCCEE
Q psy965 194 ASMTAMFAGSDFI 206 (214)
Q Consensus 194 A~~ia~~aGaDFI 206 (214)
.++.+.++|+|-|
T Consensus 185 v~~~~~~~Ga~~i 197 (423)
T 3ivs_A 185 LYKAVDKIGVNRV 197 (423)
T ss_dssp HHHHHHHHCCSEE
T ss_pred HHHHHHHhCCCcc
Confidence 9999999999975
No 37
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=88.85 E-value=1.1 Score=35.86 Aligned_cols=69 Identities=13% Similarity=0.087 Sum_probs=42.6
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.++.+.+.|||-+=+-. . .+ .+.+..+.+.++. ..+++++|.--..|. ....+.+.+.|+|||.+.
T Consensus 69 ~~~~~~~~Gad~v~v~~-~----~~-----~~~~~~~~~~~~~-~g~~~~v~~~~~~t~---~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLG-V----TD-----VLTIQSCIRAAKE-AGKQVVVDMICVDDL---PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEET-T----SC-----HHHHHHHHHHHHH-HTCEEEEECTTCSSH---HHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEeC-C----CC-----hhHHHHHHHHHHH-cCCeEEEEecCCCCH---HHHHHHHHHcCCCEEEEc
Confidence 58999999998754421 1 11 2344555555543 347888873223232 233456778899999988
Q ss_pred CCC
Q psy965 210 GSI 212 (214)
Q Consensus 210 TGf 212 (214)
+||
T Consensus 135 ~g~ 137 (211)
T 3f4w_A 135 TGT 137 (211)
T ss_dssp CCH
T ss_pred CCC
Confidence 875
No 38
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=88.58 E-value=3.2 Score=35.16 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=47.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecChh---------------HhhcC-ChhHHHHHHHHHHHHhcCCceEEEEEec
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQRS---------------LVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAV 182 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~---------------~l~sg-~~~~v~~Ei~~v~~a~~~~~~lKvIlEt 182 (214)
.|....+..+.-++...+.|+|.|.+=++.+ ++..| +.+.+.+-++++++..++ .++ ++ .
T Consensus 25 ~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~-~Pi--~~-m 100 (262)
T 2ekc_A 25 VGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPD-IPF--LL-M 100 (262)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTT-SCE--EE-E
T ss_pred CCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCC-CCE--EE-E
Confidence 4555566667667777777788777766554 24444 235566677777766533 333 33 2
Q ss_pred cCCCCHHH---HHHHHHHHHHcCCCEE
Q psy965 183 GELKTSEN---IYCASMTAMFAGSDFI 206 (214)
Q Consensus 183 ~~L~t~e~---i~~A~~ia~~aGaDFI 206 (214)
+++ +.-. +.+-++.|.++|+|.+
T Consensus 101 ~y~-n~v~~~g~~~f~~~~~~aG~dgv 126 (262)
T 2ekc_A 101 TYY-NPIFRIGLEKFCRLSREKGIDGF 126 (262)
T ss_dssp CCH-HHHHHHCHHHHHHHHHHTTCCEE
T ss_pred ecC-cHHHHhhHHHHHHHHHHcCCCEE
Confidence 444 2111 1355667778888854
No 39
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=88.49 E-value=1.9 Score=36.09 Aligned_cols=121 Identities=12% Similarity=0.135 Sum_probs=66.9
Q ss_pred CCCCHHHHHHHHHHhhccCchhhhcccc---ccCcccHHHHHHhhhcCCCCCCeEEEe-cCCCCCCCCHHHHHHHHHHHH
Q psy965 60 GDDTEAVVETLTLKAIQPLSEELKEKVL---RGFVSTVWHGSDNLKTKLVYQPCLSQP-AGFPSGQYLLETRLHEIELLA 135 (214)
Q Consensus 60 ~~~T~~~I~~lc~eA~~~f~~~~~~~~~---cv~P~~V~~a~~~L~~~gs~v~vatV~-igFP~G~~~~~~K~~E~~~Ai 135 (214)
|-.++.++.++...+.+. +.. +..|.++..+++ ..++||-.+. -+||.-......-..++++++
T Consensus 31 pl~~~~~~~~~A~a~~~~-------Ga~~i~~~~~~~i~~ir~-----~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~ 98 (229)
T 3q58_A 31 PMDKPEIVAAMAQAAASA-------GAVAVRIEGIENLRTVRP-----HLSVPIIGIIKRDLTGSPVRITPYLQDVDALA 98 (229)
T ss_dssp TTCSHHHHHHHHHHHHHT-------TCSEEEEESHHHHHHHGG-----GCCSCEEEECBCCCSSCCCCBSCSHHHHHHHH
T ss_pred CCCCcchHHHHHHHHHHC-------CCcEEEECCHHHHHHHHH-----hcCCCEEEEEeecCCCCceEeCccHHHHHHHH
Confidence 334567777777666642 122 335555555554 3567765431 244431111111245788899
Q ss_pred HCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 136 KQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 136 ~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
+.|||-| +++....++. +.+.+-++.+++ .-+.++.+.. |.++.. .+.++|+|||-|
T Consensus 99 ~aGad~I--~l~~~~~~~p--~~l~~~i~~~~~-----~g~~v~~~v~---t~eea~----~a~~~Gad~Ig~ 155 (229)
T 3q58_A 99 QAGADII--AFDASFRSRP--VDIDSLLTRIRL-----HGLLAMADCS---TVNEGI----SCHQKGIEFIGT 155 (229)
T ss_dssp HHTCSEE--EEECCSSCCS--SCHHHHHHHHHH-----TTCEEEEECS---SHHHHH----HHHHTTCSEEEC
T ss_pred HcCCCEE--EECccccCCh--HHHHHHHHHHHH-----CCCEEEEecC---CHHHHH----HHHhCCCCEEEe
Confidence 9999965 4455443322 334444444443 2367777765 556653 456899999974
No 40
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=88.29 E-value=1.9 Score=36.05 Aligned_cols=119 Identities=14% Similarity=0.189 Sum_probs=65.5
Q ss_pred CCHHHHHHHHHHhhccCchhhhcccc---ccCcccHHHHHHhhhcCCCCCCeEEE-ecCCCCCCCCHHHHHHHHHHHHHC
Q psy965 62 DTEAVVETLTLKAIQPLSEELKEKVL---RGFVSTVWHGSDNLKTKLVYQPCLSQ-PAGFPSGQYLLETRLHEIELLAKQ 137 (214)
Q Consensus 62 ~T~~~I~~lc~eA~~~f~~~~~~~~~---cv~P~~V~~a~~~L~~~gs~v~vatV-~igFP~G~~~~~~K~~E~~~Ai~~ 137 (214)
.++.++.++...+.+. +.. +..|.+++.+++ ..++||-.+ -.+||.-......-..+++++++.
T Consensus 33 ~~~~~~~~~A~a~~~~-------Ga~~i~~~~~~~i~~ir~-----~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~ 100 (232)
T 3igs_A 33 DKPEIVAAMALAAEQA-------GAVAVRIEGIDNLRMTRS-----LVSVPIIGIIKRDLDESPVRITPFLDDVDALAQA 100 (232)
T ss_dssp CSHHHHHHHHHHHHHT-------TCSEEEEESHHHHHHHHT-----TCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHC-------CCeEEEECCHHHHHHHHH-----hcCCCEEEEEeecCCCcceEeCccHHHHHHHHHc
Confidence 3566777776666642 111 335666665554 356776542 123443111111124578889999
Q ss_pred CCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 138 KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 138 GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
|||-| +++-...++. +.+.+-++.+++ ..+.++.+.. +.++.. .+.++|+|||-+
T Consensus 101 Gad~V--~l~~~~~~~p--~~l~~~i~~~~~-----~g~~v~~~v~---t~eea~----~a~~~Gad~Ig~ 155 (232)
T 3igs_A 101 GAAII--AVDGTARQRP--VAVEALLARIHH-----HHLLTMADCS---SVDDGL----ACQRLGADIIGT 155 (232)
T ss_dssp TCSEE--EEECCSSCCS--SCHHHHHHHHHH-----TTCEEEEECC---SHHHHH----HHHHTTCSEEEC
T ss_pred CCCEE--EECccccCCH--HHHHHHHHHHHH-----CCCEEEEeCC---CHHHHH----HHHhCCCCEEEE
Confidence 99964 4455443322 334444444443 2367777765 556553 457899999974
No 41
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=88.11 E-value=7.8 Score=33.26 Aligned_cols=91 Identities=15% Similarity=0.062 Sum_probs=66.4
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHH-CCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIY 192 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~-~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~ 192 (214)
+=| +.|.-..+.=..-+++.++ .|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|-.++ ++..
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai 89 (293)
T 1f6k_A 13 VSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKD--QIALIAQVGSVNL-KEAV 89 (293)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCH-HHHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCCCCH-HHHH
Confidence 566 5677778877788999999 999985444444444444555555556666676664 5799999999955 5566
Q ss_pred HHHHHHHHcCCCEEEc
Q psy965 193 CASMTAMFAGSDFIKT 208 (214)
Q Consensus 193 ~A~~ia~~aGaDFIKT 208 (214)
+.++.|.++|+|.+=-
T Consensus 90 ~la~~a~~~Gadavlv 105 (293)
T 1f6k_A 90 ELGKYATELGYDCLSA 105 (293)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCEEEE
Confidence 8888999999998743
No 42
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=88.10 E-value=4.8 Score=34.89 Aligned_cols=97 Identities=13% Similarity=0.044 Sum_probs=68.6
Q ss_pred CCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 108 QPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 108 v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
+-++.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..+
T Consensus 15 v~~a~v-TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~~ 91 (303)
T 2wkj_A 15 VMAALL-TPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKG--KIKLIAHVGCVS 91 (303)
T ss_dssp EEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSS
T ss_pred eEEeeE-cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCC
Confidence 333444 566 5677778877788999999999985444444444443455555556666676664 479999999985
Q ss_pred CHHHHHHHHHHHHHcCCCEEEc
Q psy965 187 TSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKT 208 (214)
+ ++..+.++.|.++|+|.+=-
T Consensus 92 t-~~ai~la~~A~~~Gadavlv 112 (303)
T 2wkj_A 92 T-AESQQLAASAKRYGFDAVSA 112 (303)
T ss_dssp H-HHHHHHHHHHHHHTCSEEEE
T ss_pred H-HHHHHHHHHHHhCCCCEEEe
Confidence 5 55668888999999998743
No 43
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=88.03 E-value=5 Score=34.80 Aligned_cols=99 Identities=13% Similarity=0.053 Sum_probs=70.8
Q ss_pred CCCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 107 YQPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
++-.+.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|-.
T Consensus 18 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~ 94 (304)
T 3l21_A 18 TLLTAMV-TPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGD--RARVIAGAGTY 94 (304)
T ss_dssp SEEEECC-CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCCS
T ss_pred ceEEEEE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCC
Confidence 3444444 667 6788888888889999999999986444344444433455555556666666664 47999999999
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 186 KTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++ ++..+.++.|.++|+|.|=-.
T Consensus 95 ~t-~~ai~la~~a~~~Gadavlv~ 117 (304)
T 3l21_A 95 DT-AHSIRLAKACAAEGAHGLLVV 117 (304)
T ss_dssp CH-HHHHHHHHHHHHHTCSEEEEE
T ss_pred CH-HHHHHHHHHHHHcCCCEEEEC
Confidence 55 666688899999999987543
No 44
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=87.85 E-value=2.6 Score=36.31 Aligned_cols=132 Identities=14% Similarity=0.027 Sum_probs=81.0
Q ss_pred CCCCHHHHHHHHHHhhc-cCchhhhccccccCcccHH------HHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHH
Q psy965 60 GDDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVW------HGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIE 132 (214)
Q Consensus 60 ~~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~------~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~ 132 (214)
...|.++..++++.... ++..- .....++|.++| ...+.+.+ ..++++++. + |. ...++
T Consensus 22 ~~~~~e~k~~i~~~L~~~Gv~~I--E~g~~~~~~~~p~~~d~~~~~~~~~~-~~~~~~~~l-~--~~--------~~~i~ 87 (298)
T 2cw6_A 22 NIVSTPVKIKLIDMLSEAGLSVI--ETTSFVSPKWVPQMGDHTEVLKGIQK-FPGINYPVL-T--PN--------LKGFE 87 (298)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEE--CCEECCCTTTCGGGTTHHHHHHHSCC-CTTCBCCEE-C--CS--------HHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCcCEE--EECCCcCcccccccCCHHHHHHHHhh-CCCCEEEEE-c--CC--------HHhHH
Confidence 34677777777777654 23200 000123343222 23334432 235565555 3 31 45789
Q ss_pred HHHHCCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcC-CceEEEEEecc-------CCCCHHHHHHHHHHHH
Q psy965 133 LLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAVG-------ELKTSENIYCASMTAM 199 (214)
Q Consensus 133 ~Ai~~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~-------~L~t~e~i~~A~~ia~ 199 (214)
.|++.|++.|-+.+..+.. +....++..+.+..+.+.+.. +..+-+-+.+. .- +.+.+.+.++.+.
T Consensus 88 ~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 166 (298)
T 2cw6_A 88 AAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKI-SPAKVAEVTKKFY 166 (298)
T ss_dssp HHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSC-CHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCC-CHHHHHHHHHHHH
Confidence 9999999999999877644 345677888888888877753 23444434322 22 6788999999999
Q ss_pred HcCCCEE
Q psy965 200 FAGSDFI 206 (214)
Q Consensus 200 ~aGaDFI 206 (214)
++|+|.|
T Consensus 167 ~~Ga~~i 173 (298)
T 2cw6_A 167 SMGCYEI 173 (298)
T ss_dssp HTTCSEE
T ss_pred HcCCCEE
Confidence 9999985
No 45
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=87.42 E-value=5.3 Score=34.57 Aligned_cols=98 Identities=10% Similarity=0.009 Sum_probs=68.8
Q ss_pred CCCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 107 YQPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
++-++.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..
T Consensus 15 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--rvpViaGvg~~ 91 (301)
T 1xky_A 15 TIATAMV-TPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDK--RVPVIAGTGSN 91 (301)
T ss_dssp SEEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCS
T ss_pred ceEEeeE-CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CceEEeCCCCC
Confidence 3333444 556 4677778877788999999999986544444444443455555556666666664 47899999998
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEc
Q psy965 186 KTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
+| ++..+.++.|.++|+|.+=-
T Consensus 92 ~t-~~ai~la~~A~~~Gadavlv 113 (301)
T 1xky_A 92 NT-HASIDLTKKATEVGVDAVML 113 (301)
T ss_dssp CH-HHHHHHHHHHHHTTCSEEEE
T ss_pred CH-HHHHHHHHHHHhcCCCEEEE
Confidence 55 55668888999999998743
No 46
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.36 E-value=5.9 Score=34.28 Aligned_cols=97 Identities=19% Similarity=0.154 Sum_probs=67.5
Q ss_pred CCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 108 QPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 108 v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
+-.+.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .++||.-+|..+
T Consensus 20 v~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~s 96 (304)
T 3cpr_A 20 VGVAMV-TPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGD--RAKLIAGVGTNN 96 (304)
T ss_dssp EEEECC-CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTT--TSEEEEECCCSC
T ss_pred eEEeee-ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEecCCCCC
Confidence 433444 667 5688888888889999999999985443333333333444555555666666654 478999999985
Q ss_pred CHHHHHHHHHHHHHcCCCEEEc
Q psy965 187 TSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKT 208 (214)
+ ++..+.++.|.++|+|.+=-
T Consensus 97 t-~~ai~la~~A~~~Gadavlv 117 (304)
T 3cpr_A 97 T-RTSVELAEAAASAGADGLLV 117 (304)
T ss_dssp H-HHHHHHHHHHHHTTCSEEEE
T ss_pred H-HHHHHHHHHHHhcCCCEEEE
Confidence 5 55668888999999998743
No 47
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=87.35 E-value=5.5 Score=32.04 Aligned_cols=128 Identities=13% Similarity=0.176 Sum_probs=65.7
Q ss_pred CCCCHHHHHHHHHHhhc-cCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEE-ecCCCCCCCCHHHHHHHHHHHHHC
Q psy965 60 GDDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQ-PAGFPSGQYLLETRLHEIELLAKQ 137 (214)
Q Consensus 60 ~~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV-~igFP~G~~~~~~K~~E~~~Ai~~ 137 (214)
|-...+...++.+.+.+ ... ....-.|..++..++. +++++..+ --.||.+......-..+++.+++.
T Consensus 18 p~~~~~~~~~~a~~~~~~Ga~-----~i~~~~~~~i~~i~~~-----~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~ 87 (223)
T 1y0e_A 18 PLHSSFIMSKMALAAYEGGAV-----GIRANTKEDILAIKET-----VDLPVIGIVKRDYDHSDVFITATSKEVDELIES 87 (223)
T ss_dssp TTCCHHHHHHHHHHHHHHTCS-----EEEEESHHHHHHHHHH-----CCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHCCCe-----eeccCCHHHHHHHHHh-----cCCCEEeeeccCCCccccccCCcHHHHHHHHhC
Confidence 33455666666666553 111 0112245455544442 45665332 123443322111124567888999
Q ss_pred CCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 138 KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 138 GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
||+-+- +......+.+ +.+.+-++.+++.+++ ++++++.. |.++.. .+.++|+|||.++.
T Consensus 88 Gad~v~--l~~~~~~~p~-~~~~~~i~~~~~~~~~---~~v~~~~~---t~~e~~----~~~~~G~d~i~~~~ 147 (223)
T 1y0e_A 88 QCEVIA--LDATLQQRPK-ETLDELVSYIRTHAPN---VEIMADIA---TVEEAK----NAARLGFDYIGTTL 147 (223)
T ss_dssp TCSEEE--EECSCSCCSS-SCHHHHHHHHHHHCTT---SEEEEECS---SHHHHH----HHHHTTCSEEECTT
T ss_pred CCCEEE--EeeecccCcc-cCHHHHHHHHHHhCCC---ceEEecCC---CHHHHH----HHHHcCCCEEEeCC
Confidence 998653 3333322221 2344556666766643 34555443 556543 36789999999864
No 48
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=86.98 E-value=9.4 Score=34.16 Aligned_cols=132 Identities=8% Similarity=0.032 Sum_probs=79.4
Q ss_pred CCCCHHHHHHHHHHhhc-cCchhhhccccccCcccHHHH---HHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHH
Q psy965 60 GDDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVWHG---SDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLA 135 (214)
Q Consensus 60 ~~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~~a---~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai 135 (214)
...+.++..++++.-.+ ++. ..-+.+|.+.+.- .+.+.+.+...++++..-+ ....++.|+
T Consensus 20 ~~~~~~~k~~ia~~L~~~Gv~-----~IE~g~p~~~~~~~~~~~~i~~~~~~~~v~~~~r~----------~~~di~~a~ 84 (382)
T 2ztj_A 20 ANFSTQDKVEIAKALDEFGIE-----YIEVTTPVASPQSRKDAEVLASLGLKAKVVTHIQC----------RLDAAKVAV 84 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHTCS-----EEEECCTTSCHHHHHHHHHHHTSCCSSEEEEEEES----------CHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCcC-----EEEEcCCcCCHHHHHHHHHHHhcCCCcEEEEEccc----------ChhhHHHHH
Confidence 45677777777766553 222 1125566655543 3334432334444443111 123478899
Q ss_pred HCCCCEEEEecChhHh----hcCChhHHHHHHHHHHHHhcC-C--ceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 136 KQKVDEVDIVIQRSLV----LNNQWPELFSEVKQMKEKCGE-K--IHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 136 ~~GAdEID~Vin~~~l----~sg~~~~v~~Ei~~v~~a~~~-~--~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.|+++|.+++..+.+ +..+.+++.+.+...++.+.. + ..+-+=+|.+.-.+.+.+.+.++.+.++ +|-|-
T Consensus 85 ~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~ 162 (382)
T 2ztj_A 85 ETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVG 162 (382)
T ss_dssp HTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEE
T ss_pred HcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEE
Confidence 9999999998776542 223456666666666665532 2 4556666888776788889999999999 98753
No 49
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=86.95 E-value=1.4 Score=40.35 Aligned_cols=67 Identities=22% Similarity=0.335 Sum_probs=46.2
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++.+++.|++-| +++.+ .|+.+.+.+.|+.+++.. .++||.-+. .|.++ ++.++++|+|||+
T Consensus 146 ~e~~~~lveaGvdvI--vldta---~G~~~~~~e~I~~ik~~~----~i~Vi~g~V--~t~e~----A~~a~~aGAD~I~ 210 (400)
T 3ffs_A 146 IERAKLLVEAGVDVI--VLDSA---HGHSLNIIRTLKEIKSKM----NIDVIVGNV--VTEEA----TKELIENGADGIK 210 (400)
T ss_dssp CHHHHHHHHHTCSEE--EECCS---CCSBHHHHHHHHHHHTTC----CCEEEEEEE--CSHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCEE--EEeCC---CCCcccHHHHHHHHHhcC----CCeEEEeec--CCHHH----HHHHHHcCCCEEE
Confidence 567889999999975 44543 356677788888887654 256665222 35444 4567789999999
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
.+
T Consensus 211 vG 212 (400)
T 3ffs_A 211 VG 212 (400)
T ss_dssp EC
T ss_pred Ee
Confidence 84
No 50
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=86.76 E-value=8.5 Score=33.11 Aligned_cols=91 Identities=15% Similarity=0.114 Sum_probs=66.4
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..++ ++..+
T Consensus 17 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~ 93 (297)
T 3flu_A 17 TPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAK--RVPVIAGTGANNT-VEAIA 93 (297)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-HHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCcCH-HHHHH
Confidence 566 5677778888888999999999986544444444444455555556666666664 4889999999855 56668
Q ss_pred HHHHHHHcCCCEEEc
Q psy965 194 ASMTAMFAGSDFIKT 208 (214)
Q Consensus 194 A~~ia~~aGaDFIKT 208 (214)
.++.|.++|+|.+=-
T Consensus 94 la~~a~~~Gadavlv 108 (297)
T 3flu_A 94 LSQAAEKAGADYTLS 108 (297)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 888999999998743
No 51
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=86.60 E-value=7.7 Score=33.82 Aligned_cols=98 Identities=10% Similarity=0.073 Sum_probs=70.0
Q ss_pred CCCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 107 YQPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
++-.+.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..
T Consensus 26 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~ 102 (314)
T 3qze_A 26 GSMVALV-TPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKG--RIPVIAGTGAN 102 (314)
T ss_dssp EEEEECC-CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCS
T ss_pred eeEEeeE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCc
Confidence 3433444 667 6788888888888999999999997443344444444455555556666676665 48899999998
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEc
Q psy965 186 KTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
++ ++..+.++.|.++|+|.+=-
T Consensus 103 st-~eai~la~~A~~~Gadavlv 124 (314)
T 3qze_A 103 ST-REAVALTEAAKSGGADACLL 124 (314)
T ss_dssp SH-HHHHHHHHHHHHTTCSEEEE
T ss_pred CH-HHHHHHHHHHHHcCCCEEEE
Confidence 55 55668888999999998743
No 52
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=86.41 E-value=6.7 Score=33.74 Aligned_cols=92 Identities=13% Similarity=0.002 Sum_probs=65.1
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .++||.-+|..++ ++..+
T Consensus 13 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~ 89 (294)
T 3b4u_A 13 TPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIA--PSRIVTGVLVDSI-EDAAD 89 (294)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCC--GGGEEEEECCSSH-HHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCccH-HHHHH
Confidence 566 5677788887888999999999985444444444333445555555556666654 4789999999855 55668
Q ss_pred HHHHHHHcCCCEEEcC
Q psy965 194 ASMTAMFAGSDFIKTS 209 (214)
Q Consensus 194 A~~ia~~aGaDFIKTS 209 (214)
.++.|.++|+|.+=-.
T Consensus 90 la~~A~~~Gadavlv~ 105 (294)
T 3b4u_A 90 QSAEALNAGARNILLA 105 (294)
T ss_dssp HHHHHHHTTCSEEEEC
T ss_pred HHHHHHhcCCCEEEEc
Confidence 8889999999987543
No 53
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=86.29 E-value=5.4 Score=35.30 Aligned_cols=98 Identities=16% Similarity=0.011 Sum_probs=69.9
Q ss_pred CCCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 107 YQPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
++-++.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..
T Consensus 34 Gv~~alv-TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~ 110 (343)
T 2v9d_A 34 GIIPPVS-TIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDR--RVPVLIGTGGT 110 (343)
T ss_dssp EECCEEC-CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCSS
T ss_pred CeEEeeE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCC
Confidence 3444555 667 5788888888889999999999985444444444433455555556666666664 47899999998
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEc
Q psy965 186 KTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
+| ++..+.++.|.++|+|.|=-
T Consensus 111 st-~eai~la~~A~~~Gadavlv 132 (343)
T 2v9d_A 111 NA-RETIELSQHAQQAGADGIVV 132 (343)
T ss_dssp CH-HHHHHHHHHHHHHTCSEEEE
T ss_pred CH-HHHHHHHHHHHhcCCCEEEE
Confidence 55 55668888999999998743
No 54
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=86.25 E-value=8.5 Score=34.58 Aligned_cols=99 Identities=14% Similarity=0.113 Sum_probs=70.1
Q ss_pred CCCCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccC
Q psy965 106 VYQPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 184 (214)
Q Consensus 106 s~v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~ 184 (214)
.++-++.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|.
T Consensus 61 ~Gi~~alv-TPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~ 137 (360)
T 4dpp_A 61 LRVITAIK-TPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGG--SIKVIGNTGS 137 (360)
T ss_dssp CCEEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--TSEEEEECCC
T ss_pred CCeEEEEe-CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCC--CCeEEEecCC
Confidence 45544555 777 6788888888888999999999986443344433333445544455666666654 4789999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 185 LKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.++ ++..+.++.|.++|+|.+=-
T Consensus 138 ~st-~eai~la~~A~~~Gadavlv 160 (360)
T 4dpp_A 138 NST-REAIHATEQGFAVGMHAALH 160 (360)
T ss_dssp SSH-HHHHHHHHHHHHTTCSEEEE
T ss_pred CCH-HHHHHHHHHHHHcCCCEEEE
Confidence 855 56668889999999998754
No 55
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.12 E-value=3.5 Score=36.11 Aligned_cols=84 Identities=12% Similarity=0.102 Sum_probs=55.2
Q ss_pred HHHHHHHHHHCCCCEEEEecChhHhhc-------------------CChhHHHHHHHHHHHHhcCCceEEEEEe---ccC
Q psy965 127 RLHEIELLAKQKVDEVDIVIQRSLVLN-------------------NQWPELFSEVKQMKEKCGEKIHMKTILA---VGE 184 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~Vin~~~l~s-------------------g~~~~v~~Ei~~v~~a~~~~~~lKvIlE---t~~ 184 (214)
=..-++.|.+.|.|-||+=..-|+|++ ++...+.+=+++|+++++-+..+|+=.. .+-
T Consensus 146 ~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g 225 (338)
T 1z41_A 146 FKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKG 225 (338)
T ss_dssp HHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTS
T ss_pred HHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCC
Confidence 345678888999999998665444431 1224456667778887732344554332 112
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 185 LKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+ +.++....++.+.++|+|||--|.|
T Consensus 226 ~-~~~~~~~~a~~l~~~Gvd~i~v~~~ 251 (338)
T 1z41_A 226 L-DIADHIGFAKWMKEQGVDLIDCSSG 251 (338)
T ss_dssp C-CHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred C-CHHHHHHHHHHHHHcCCCEEEEecC
Confidence 4 5677778888889999999997765
No 56
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=86.04 E-value=5.8 Score=34.04 Aligned_cols=90 Identities=19% Similarity=0.108 Sum_probs=64.8
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.| -..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .++||.-+|..++ ++..+
T Consensus 12 TPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pvi~Gvg~~~t-~~ai~ 87 (291)
T 3a5f_A 12 TPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNK--RIPVIAGTGSNNT-AASIA 87 (291)
T ss_dssp CCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-HHHHH
T ss_pred cCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccH-HHHHH
Confidence 556 567 777777788999999999985444444444444455555556666676664 4789999999855 55668
Q ss_pred HHHHHHHcCCCEEEc
Q psy965 194 ASMTAMFAGSDFIKT 208 (214)
Q Consensus 194 A~~ia~~aGaDFIKT 208 (214)
.++.|.++|+|.+=-
T Consensus 88 la~~a~~~Gadavlv 102 (291)
T 3a5f_A 88 MSKWAESIGVDGLLV 102 (291)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 888999999998743
No 57
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=85.98 E-value=3.6 Score=36.24 Aligned_cols=91 Identities=14% Similarity=0.097 Sum_probs=60.6
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC-CceEEEEEeccC
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGE 184 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~ 184 (214)
.+++++.. ++| |... ...++.|.+.|++.+-+....+.+ + ++..+++.+.. +..+-+-+|.+.
T Consensus 81 ~~~~i~~l--~~p-~~~~----~~~i~~a~~aGvd~v~I~~~~s~~-----~----~~~~~i~~ak~~G~~v~~~~~~a~ 144 (345)
T 1nvm_A 81 SHAQIATL--LLP-GIGS----VHDLKNAYQAGARVVRVATHCTEA-----D----VSKQHIEYARNLGMDTVGFLMMSH 144 (345)
T ss_dssp SSSEEEEE--ECB-TTBC----HHHHHHHHHHTCCEEEEEEETTCG-----G----GGHHHHHHHHHHTCEEEEEEESTT
T ss_pred CCCEEEEE--ecC-Cccc----HHHHHHHHhCCcCEEEEEEeccHH-----H----HHHHHHHHHHHCCCEEEEEEEeCC
Confidence 46676655 467 4433 346888999999999887655432 2 33334443322 245667777787
Q ss_pred CCCHHHHHHHHHHHHHcCCCEE--EcCCCC
Q psy965 185 LKTSENIYCASMTAMFAGSDFI--KTSGSI 212 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFI--KTSTGf 212 (214)
-.+.+.+.+.++.+.++|++.| +=+||.
T Consensus 145 ~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~ 174 (345)
T 1nvm_A 145 MIPAEKLAEQGKLMESYGATCIYMADSGGA 174 (345)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEECTTCC
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCc
Confidence 7678889999999999999986 445654
No 58
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=85.93 E-value=2.6 Score=37.75 Aligned_cols=68 Identities=22% Similarity=0.357 Sum_probs=46.8
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++.+++.|++-|.+ |.+ .|+.+.+.+-|+.+++.+++ ++||+.. ..+.++ ++.+.++|+|||.
T Consensus 155 ~~~a~~~~~~G~d~i~i--~~~---~g~~~~~~e~i~~ir~~~~~---~pviv~~--v~~~~~----a~~a~~~Gad~I~ 220 (404)
T 1eep_A 155 IERVEELVKAHVDILVI--DSA---HGHSTRIIELIKKIKTKYPN---LDLIAGN--IVTKEA----ALDLISVGADCLK 220 (404)
T ss_dssp HHHHHHHHHTTCSEEEE--CCS---CCSSHHHHHHHHHHHHHCTT---CEEEEEE--ECSHHH----HHHHHTTTCSEEE
T ss_pred HHHHHHHHHCCCCEEEE--eCC---CCChHHHHHHHHHHHHHCCC---CeEEEcC--CCcHHH----HHHHHhcCCCEEE
Confidence 44567788999998766 543 26667788888999987753 4566632 224333 4566789999998
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
.+
T Consensus 221 vg 222 (404)
T 1eep_A 221 VG 222 (404)
T ss_dssp EC
T ss_pred EC
Confidence 83
No 59
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=85.77 E-value=1.4 Score=39.34 Aligned_cols=82 Identities=12% Similarity=0.095 Sum_probs=53.8
Q ss_pred HHHHHHHHCCCCEEEEecChhHhh----c-------C--------ChhHHHHHHHHHHHHhcCCceEEEEEeccC-----
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVL----N-------N--------QWPELFSEVKQMKEKCGEKIHMKTILAVGE----- 184 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~----s-------g--------~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~----- 184 (214)
.-++.|.+.|.|-|++=.--|+|+ | . +...+.+=+++|++++++..++-|=|-..+
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 346778889999999876555443 1 1 123455667788888875333433332221
Q ss_pred -CCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 185 -LKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 185 -L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+ +.++....++...++|+|||-.|.|
T Consensus 242 ~~-~~~~~~~la~~L~~~Gvd~i~vs~g 268 (363)
T 3l5l_A 242 EQ-TLEESIELARRFKAGGLDLLSVSVG 268 (363)
T ss_dssp HH-HHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CC-CHHHHHHHHHHHHHcCCCEEEEecC
Confidence 3 4567777888889999999998765
No 60
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=85.76 E-value=2.9 Score=39.68 Aligned_cols=86 Identities=14% Similarity=0.122 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHCCCCEEEEecChhHhh----c---------------CChhHHHHHHHHHHHHhcCCceE--EEEEec--
Q psy965 126 TRLHEIELLAKQKVDEVDIVIQRSLVL----N---------------NQWPELFSEVKQMKEKCGEKIHM--KTILAV-- 182 (214)
Q Consensus 126 ~K~~E~~~Ai~~GAdEID~Vin~~~l~----s---------------g~~~~v~~Ei~~v~~a~~~~~~l--KvIlEt-- 182 (214)
.=..-++.|.+.|.|-|++=.--|+|+ + ++...+.+=++++++++++..++ |+=...
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~ 221 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLV 221 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccC
Confidence 344567888999999999754444332 1 12344666678888888753444 443321
Q ss_pred -cCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 183 -GELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 183 -~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+-+ +.++....++.+.++|+|||-.|.|+
T Consensus 222 ~~g~-~~~~~~~~a~~l~~~g~d~i~v~~~~ 251 (671)
T 1ps9_A 222 EDGG-TFAETVELAQAIEAAGATIINTGIGW 251 (671)
T ss_dssp TTCC-CHHHHHHHHHHHHHHTCSEEEEEECB
T ss_pred CCCC-CHHHHHHHHHHHHhcCCCEEEcCCCc
Confidence 124 56677777888889999999876543
No 61
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=85.55 E-value=2.4 Score=38.79 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=50.1
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
..+++++++.|+|.|=+-.+ .|+++.+.+.+..+++..++ . .+| .|...+. ..+..+.++|+|+|+
T Consensus 235 ~~~a~~l~~~G~d~ivi~~a-----~g~~~~~~~~i~~l~~~~p~-~--pvi--~G~v~t~----~~a~~~~~~Gad~I~ 300 (491)
T 1zfj_A 235 FERAEALFEAGADAIVIDTA-----HGHSAGVLRKIAEIRAHFPN-R--TLI--AGNIATA----EGARALYDAGVDVVK 300 (491)
T ss_dssp HHHHHHHHHHTCSEEEECCS-----CTTCHHHHHHHHHHHHHCSS-S--CEE--EEEECSH----HHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHcCCCeEEEeee-----cCcchhHHHHHHHHHHHCCC-C--cEe--CCCccCH----HHHHHHHHcCCCEEE
Confidence 46889999999998554332 36777788889999887743 2 334 5555454 334467789999999
Q ss_pred cCCCC
Q psy965 208 TSGSI 212 (214)
Q Consensus 208 TSTGf 212 (214)
.|.|.
T Consensus 301 vg~g~ 305 (491)
T 1zfj_A 301 VGIGP 305 (491)
T ss_dssp ECSSC
T ss_pred ECccC
Confidence 98754
No 62
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=85.51 E-value=6.9 Score=33.76 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=68.7
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCC
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 187 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t 187 (214)
+-.+.+ +=|+.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ ..+.||.-+|..++
T Consensus 12 v~~a~v-TPf~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-~rvpviaGvg~~~t 89 (301)
T 3m5v_A 12 AMTALI-TPFKNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKG-TKVKVLAGAGSNAT 89 (301)
T ss_dssp EEEECC-CCEETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEEECCCSSH
T ss_pred eeEeee-cCcCCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-CCCeEEEeCCCCCH
Confidence 333444 6777777778887888999999999986433333433333445555555566666653 25899999999855
Q ss_pred HHHHHHHHHHHHHcCCCEEEcCC
Q psy965 188 SENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 188 ~e~i~~A~~ia~~aGaDFIKTST 210 (214)
++..+.++.|.++|+|.+=-.+
T Consensus 90 -~~ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 90 -HEAVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp -HHHHHHHHHHHHTTCSEEEEEC
T ss_pred -HHHHHHHHHHHHcCCCEEEEcC
Confidence 5666888999999999875433
No 63
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=85.44 E-value=12 Score=31.71 Aligned_cols=89 Identities=11% Similarity=0.071 Sum_probs=62.2
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhc-CChhHHHHHHHHHHHHhcCCceEEEEE------
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN-NQWPELFSEVKQMKEKCGEKIHMKTIL------ 180 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s-g~~~~v~~Ei~~v~~a~~~~~~lKvIl------ 180 (214)
.+||+. +.+ .+.+.-+.+++.+.+.|||-|++-+|+- .. .+.+.+.+-+..+++.+++ . .+|+
T Consensus 20 p~Icv~-l~~----~~~~e~~~~~~~~~~~~~D~vElRvD~l--~~~~~~~~v~~~l~~lr~~~~~-~--PiI~T~Rt~~ 89 (257)
T 2yr1_A 20 PCICAP-VVG----EDDRKVLREAEEVCRKQPDLLEWRADFF--RAIDDQERVLATANGLRNIAGE-I--PILFTIRSER 89 (257)
T ss_dssp CEEEEE-ECC----SSHHHHHHHHHHHHHSCCSEEEEEGGGC--TTTTCHHHHHHHHHHHHHHSSS-C--CEEEECCCTT
T ss_pred cEEEEE-ecC----CCHHHHHHHHHHHhhcCCCEEEEEeecc--cccCcHHHHHHHHHHHHHhccC-C--CEEEEEeecc
Confidence 456666 444 3556667889999999999999999972 22 2467788888888887754 2 3343
Q ss_pred eccCC--CCHHHHHHHHHHHHHcC-CCEE
Q psy965 181 AVGEL--KTSENIYCASMTAMFAG-SDFI 206 (214)
Q Consensus 181 Et~~L--~t~e~i~~A~~ia~~aG-aDFI 206 (214)
|-|.. .++++-.+.-+.+++.| +|||
T Consensus 90 eGG~~~~~~~~~~~~ll~~~~~~g~~d~i 118 (257)
T 2yr1_A 90 EGGQPIPLNEAEVRRLIEAICRSGAIDLV 118 (257)
T ss_dssp TTCCCCSSCHHHHHHHHHHHHHHTCCSEE
T ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCCCEE
Confidence 44533 25566667778888888 9998
No 64
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=85.34 E-value=3.8 Score=35.72 Aligned_cols=98 Identities=9% Similarity=0.046 Sum_probs=68.0
Q ss_pred CCCeEEEecCC--CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccC
Q psy965 107 YQPCLSQPAGF--PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 184 (214)
Q Consensus 107 ~v~vatV~igF--P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~ 184 (214)
++-.+.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|.
T Consensus 14 Gv~~a~v-TPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~ 90 (314)
T 3d0c_A 14 TISGINI-VPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNG--RATVVAGIGY 90 (314)
T ss_dssp SEEECCC-CCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECS
T ss_pred ceEEeee-ccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCC--CCeEEecCCc
Confidence 3434444 667 6788888888889999999999884322223333333455555556666666664 4799999999
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 185 LKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++.+ ..+.++.|.++|+|.|=-.
T Consensus 91 -st~~-ai~la~~A~~~Gadavlv~ 113 (314)
T 3d0c_A 91 -SVDT-AIELGKSAIDSGADCVMIH 113 (314)
T ss_dssp -SHHH-HHHHHHHHHHTTCSEEEEC
T ss_pred -CHHH-HHHHHHHHHHcCCCEEEEC
Confidence 7754 5578889999999987543
No 65
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=85.28 E-value=8.9 Score=32.84 Aligned_cols=92 Identities=13% Similarity=0.035 Sum_probs=64.9
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..++ ++..+
T Consensus 11 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~ 87 (291)
T 3tak_A 11 TPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANK--RIPIIAGTGANST-REAIE 87 (291)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-HHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCeEEEeCCCCCH-HHHHH
Confidence 556 5677777887888999999999987333333333333455555555666666664 4889999999855 56668
Q ss_pred HHHHHHHcCCCEEEcC
Q psy965 194 ASMTAMFAGSDFIKTS 209 (214)
Q Consensus 194 A~~ia~~aGaDFIKTS 209 (214)
.++.|.++|+|.+=-.
T Consensus 88 la~~a~~~Gadavlv~ 103 (291)
T 3tak_A 88 LTKAAKDLGADAALLV 103 (291)
T ss_dssp HHHHHHHHTCSEEEEE
T ss_pred HHHHHHhcCCCEEEEc
Confidence 8899999999987543
No 66
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=85.28 E-value=3.7 Score=38.07 Aligned_cols=68 Identities=19% Similarity=0.237 Sum_probs=47.6
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++.+++.|+|-|.+ |.+ .|+...+.+.++.+++..++ +.+|.-+ ..+.++ ++.+.++|+|||+
T Consensus 231 ~~~a~~l~~aG~d~I~i--d~a---~g~~~~~~~~v~~i~~~~p~---~~Vi~g~--v~t~e~----a~~l~~aGaD~I~ 296 (490)
T 4avf_A 231 GERVAALVAAGVDVVVV--DTA---HGHSKGVIERVRWVKQTFPD---VQVIGGN--IATAEA----AKALAEAGADAVK 296 (490)
T ss_dssp HHHHHHHHHTTCSEEEE--ECS---CCSBHHHHHHHHHHHHHCTT---SEEEEEE--ECSHHH----HHHHHHTTCSEEE
T ss_pred HHHHHHHhhcccceEEe--ccc---CCcchhHHHHHHHHHHHCCC---ceEEEee--eCcHHH----HHHHHHcCCCEEE
Confidence 45678888999997654 432 46677888999999987754 3455522 335443 4678899999999
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
-+
T Consensus 297 vg 298 (490)
T 4avf_A 297 VG 298 (490)
T ss_dssp EC
T ss_pred EC
Confidence 63
No 67
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=85.10 E-value=6.4 Score=33.81 Aligned_cols=86 Identities=15% Similarity=0.068 Sum_probs=60.4
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .++||.-+|..++ ++..+.++.|.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~la~~A~ 92 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAG--RIKVIAGTGGNAT-HEAVHLTAHAK 92 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSCH-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCH-HHHHHHHHHHH
Confidence 55566666678899999999985444444444433455555555666666654 4789999999855 55668888999
Q ss_pred HcCCCEEEc
Q psy965 200 FAGSDFIKT 208 (214)
Q Consensus 200 ~aGaDFIKT 208 (214)
++|+|.+=-
T Consensus 93 ~~Gadavlv 101 (294)
T 2ehh_A 93 EVGADGALV 101 (294)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999998743
No 68
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=85.07 E-value=8.6 Score=33.52 Aligned_cols=99 Identities=17% Similarity=0.054 Sum_probs=69.4
Q ss_pred CCCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 107 YQPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
++-.+.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..
T Consensus 27 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~ 103 (315)
T 3na8_A 27 GIIGYTI-TPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAH--RVPTIVSVSDL 103 (315)
T ss_dssp EEEEECC-CCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCS
T ss_pred ceEEEee-CcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCC
Confidence 3433444 667 5788888888889999999999986444333433333455555556666666654 48899999998
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 186 KTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++ ++..+.++.|.++|+|.|=--
T Consensus 104 ~t-~~ai~la~~A~~~Gadavlv~ 126 (315)
T 3na8_A 104 TT-AKTVRRAQFAESLGAEAVMVL 126 (315)
T ss_dssp SH-HHHHHHHHHHHHTTCSEEEEC
T ss_pred CH-HHHHHHHHHHHhcCCCEEEEC
Confidence 55 566688899999999987543
No 69
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=85.04 E-value=3.9 Score=37.81 Aligned_cols=68 Identities=19% Similarity=0.175 Sum_probs=46.8
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-eccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-AVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-Et~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
...++.+++.|++-|.+=.+ .|+.+...+-|+.+++.+++ +.||. +. .+.+. ++.+.++|+|||
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~-----~G~~~~~~~~i~~i~~~~~~---~pvi~~~v---~t~~~----a~~l~~aGad~I 321 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSS-----QGNSVYQIAMVHYIKQKYPH---LQVIGGNV---VTAAQ----AKNLIDAGVDGL 321 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCS-----CCCSHHHHHHHHHHHHHCTT---CEEEEEEE---CSHHH----HHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEeecc-----CCcchhHHHHHHHHHHhCCC---CceEeccc---chHHH----HHHHHHcCCCEE
Confidence 45778899999998665333 25566677888999988853 34443 22 25444 556778999999
Q ss_pred EcCC
Q psy965 207 KTSG 210 (214)
Q Consensus 207 KTST 210 (214)
+-+.
T Consensus 322 ~vg~ 325 (514)
T 1jcn_A 322 RVGM 325 (514)
T ss_dssp EECS
T ss_pred EECC
Confidence 9865
No 70
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=85.03 E-value=6.5 Score=33.68 Aligned_cols=86 Identities=15% Similarity=0.083 Sum_probs=61.1
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..+| ++..+.++.|.
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~la~~a~ 92 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNG--RVQVIAGAGSNCT-EEAIELSVFAE 92 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEECCCSSH-HHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCH-HHHHHHHHHHH
Confidence 55566666678899999999985444444444443455555555666666664 4799999999855 55668888999
Q ss_pred HcCCCEEEc
Q psy965 200 FAGSDFIKT 208 (214)
Q Consensus 200 ~aGaDFIKT 208 (214)
++|+|.+=-
T Consensus 93 ~~Gadavlv 101 (289)
T 2yxg_A 93 DVGADAVLS 101 (289)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 999998743
No 71
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.01 E-value=12 Score=32.51 Aligned_cols=98 Identities=11% Similarity=0.036 Sum_probs=68.0
Q ss_pred CCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 108 QPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 108 v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
+-++.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+ + .+.||.-+|..+
T Consensus 12 v~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-g--rvpViaGvg~~~ 87 (313)
T 3dz1_A 12 TFAIAP-TPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-K--SMQVIVGVSAPG 87 (313)
T ss_dssp EEEECC-CCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-T--TSEEEEECCCSS
T ss_pred EEEEee-CCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-C--CCcEEEecCCCC
Confidence 333444 667 67888888888899999999999863333334333334455555556666666 4 478999999995
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+ ++..+.++.|.++|+|.+=-.+
T Consensus 88 t-~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 88 F-AAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp H-HHHHHHHHHHHHHTCSEEEECC
T ss_pred H-HHHHHHHHHHHHcCCCEEEECC
Confidence 5 5566788999999999885443
No 72
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=84.98 E-value=5.5 Score=35.07 Aligned_cols=91 Identities=18% Similarity=0.151 Sum_probs=66.7
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..++ ++..+
T Consensus 44 TPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~g--rvpViaGvg~~st-~eai~ 120 (332)
T 2r8w_A 44 TPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRG--RRTLMAGIGALRT-DEAVA 120 (332)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECCSSH-HHHHH
T ss_pred CCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCCCH-HHHHH
Confidence 556 5687778877888999999999986544444444444555555666666776664 4789999999855 55668
Q ss_pred HHHHHHHcCCCEEEc
Q psy965 194 ASMTAMFAGSDFIKT 208 (214)
Q Consensus 194 A~~ia~~aGaDFIKT 208 (214)
.++.|.++|+|.|=-
T Consensus 121 la~~A~~~Gadavlv 135 (332)
T 2r8w_A 121 LAKDAEAAGADALLL 135 (332)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 888999999998743
No 73
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=84.76 E-value=19 Score=32.15 Aligned_cols=78 Identities=14% Similarity=-0.010 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChh--Hh----hcCChhHHHHHHHHHHHH-------hcCCceEEEEEeccCCCCHHHH
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRS--LV----LNNQWPELFSEVKQMKEK-------CGEKIHMKTILAVGELKTSENI 191 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~--~l----~sg~~~~v~~Ei~~v~~a-------~~~~~~lKvIlEt~~L~t~e~i 191 (214)
..-..++-+.+..+||.||+ |+| .. .-++.+.+.+=+.+++++ ..-+..+|+ ...+ +++++
T Consensus 163 ~~dy~~~~~~~~~~ad~iel--NisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi---~p~~-~~~~~ 236 (367)
T 3zwt_A 163 AEDYAEGVRVLGPLADYLVV--NVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKI---APDL-TSQDK 236 (367)
T ss_dssp HHHHHHHHHHHGGGCSEEEE--ECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEE---CSCC-CHHHH
T ss_pred HHHHHHHHHHHhhhCCEEEE--ECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEe---CCCC-CHHHH
Confidence 34444555555667999875 432 11 113445566666667665 222356776 3456 67889
Q ss_pred HHHHHHHHHcCCCEEEc
Q psy965 192 YCASMTAMFAGSDFIKT 208 (214)
Q Consensus 192 ~~A~~ia~~aGaDFIKT 208 (214)
...++.+.++|+|+|.-
T Consensus 237 ~~ia~~~~~aGadgi~v 253 (367)
T 3zwt_A 237 EDIASVVKELGIDGLIV 253 (367)
T ss_dssp HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHcCCCEEEE
Confidence 99999999999999983
No 74
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=84.60 E-value=2.2 Score=37.67 Aligned_cols=150 Identities=13% Similarity=0.069 Sum_probs=88.7
Q ss_pred hhhhcccC------CCCCCCHHHHHHHHH-Hhhc-cCchhhhcccccc-Cc---ccHHHHHHhhhc--CCCCCCeEEEec
Q psy965 50 IEFIDLTT------LSGDDTEAVVETLTL-KAIQ-PLSEELKEKVLRG-FV---STVWHGSDNLKT--KLVYQPCLSQPA 115 (214)
Q Consensus 50 ~~~ID~Tl------L~~~~T~~~I~~lc~-eA~~-~f~~~~~~~~~cv-~P---~~V~~a~~~L~~--~gs~v~vatV~i 115 (214)
+..+|-|+ +....+.++..++++ .-.+ ++.. ......+ .| .+++..++..+. .-.++++++.+
T Consensus 20 v~I~DtTlRDG~Q~~~~~~~~~~k~~i~~~~L~~~Gv~~--IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~- 96 (337)
T 3ble_A 20 LEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDR--VEIASARVSKGELETVQKIMEWAATEQLTERIEILGFV- 96 (337)
T ss_dssp CEEEECHHHHHTTSTTCCCCHHHHHHHHHHHHHTTCCSE--EEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEES-
T ss_pred eEEEECCCCCCCCCCCCCcCHHHHHHHHHHHHHHcCCCE--EEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEc-
Confidence 44556553 334578888888877 5443 2220 0000122 35 466666653110 01234444441
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcC-CceEEEEEec---cCCC
Q psy965 116 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAV---GELK 186 (214)
Q Consensus 116 gFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt---~~L~ 186 (214)
.+. | .++.|++.|+++|.+.+..+.. +....++..+.+..+++.+.. +..+-+=+|. +.-.
T Consensus 97 ---~~~-----~--~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~ 166 (337)
T 3ble_A 97 ---DGN-----K--TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRN 166 (337)
T ss_dssp ---STT-----H--HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHH
T ss_pred ---cch-----h--hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcC
Confidence 221 2 7999999999999999866543 234667777788777776643 2455566665 3233
Q ss_pred CHHHHHHHHHHHHHcCCCEE--EcCCCC
Q psy965 187 TSENIYCASMTAMFAGSDFI--KTSGSI 212 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFI--KTSTGf 212 (214)
+.+.+.+.++.+.++|+|.| +-+.|.
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~ 194 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGV 194 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 57888889999999999985 435553
No 75
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=84.57 E-value=2.6 Score=34.93 Aligned_cols=85 Identities=19% Similarity=0.164 Sum_probs=56.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHH
Q psy965 116 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCAS 195 (214)
Q Consensus 116 gFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~ 195 (214)
-++.+..+.+....-++.+.+.|||-| ..|.|....| .-.+.++.+++..++ .+.||.--| ..|.++..+.-
T Consensus 123 i~e~~~l~~~~~~~~a~~a~eaGad~I--~tstg~~~gg---a~~~~i~~v~~~v~~--~ipVia~GG-I~t~~da~~~l 194 (225)
T 1mzh_A 123 IVETPYLNEEEIKKAVEICIEAGADFI--KTSTGFAPRG---TTLEEVRLIKSSAKG--RIKVKASGG-IRDLETAISMI 194 (225)
T ss_dssp ECCGGGCCHHHHHHHHHHHHHHTCSEE--ECCCSCSSSC---CCHHHHHHHHHHHTT--SSEEEEESS-CCSHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHhCCCEE--EECCCCCCCC---CCHHHHHHHHHHhCC--CCcEEEECC-CCCHHHHHHHH
Confidence 456666677777888899999999998 5676543222 122556667776653 355555444 65766654433
Q ss_pred HHHHHcCCCEEEcCCCC
Q psy965 196 MTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 196 ~ia~~aGaDFIKTSTGf 212 (214)
++|||.|=||.|.
T Consensus 195 ----~aGA~~iG~s~~~ 207 (225)
T 1mzh_A 195 ----EAGADRIGTSSGI 207 (225)
T ss_dssp ----HTTCSEEEESCHH
T ss_pred ----HhCchHHHHccHH
Confidence 5899999998764
No 76
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=84.42 E-value=9.3 Score=33.32 Aligned_cols=95 Identities=15% Similarity=0.045 Sum_probs=66.8
Q ss_pred eEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCH
Q psy965 110 CLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTS 188 (214)
Q Consensus 110 vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~ 188 (214)
++.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..++
T Consensus 28 ~alv-TPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~g--rvpViaGvg~~st- 103 (315)
T 3si9_A 28 TALI-TPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAK--RVPVVAGAGSNST- 103 (315)
T ss_dssp EECC-CCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSH-
T ss_pred EeeE-CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCH-
Confidence 3444 667 5688888888888999999999986333333333333455555555666666664 4889999999855
Q ss_pred HHHHHHHHHHHHcCCCEEEc
Q psy965 189 ENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKT 208 (214)
++..+.++.|.++|+|.|=-
T Consensus 104 ~~ai~la~~A~~~Gadavlv 123 (315)
T 3si9_A 104 SEAVELAKHAEKAGADAVLV 123 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEE
Confidence 55668889999999998743
No 77
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=84.34 E-value=6.3 Score=34.14 Aligned_cols=87 Identities=15% Similarity=0.052 Sum_probs=62.5
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..+| ++..+.++.|
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~g--rvpViaGvg~~st-~~ai~la~~A 103 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDG--KIPVIVGAGTNST-EKTLKLVKQA 103 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCH-HHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEcCCCccH-HHHHHHHHHH
Confidence 365666666778899999999986544444444444555555666666776664 4789999999955 5566888899
Q ss_pred HHcCCCEEEc
Q psy965 199 MFAGSDFIKT 208 (214)
Q Consensus 199 ~~aGaDFIKT 208 (214)
.++|+|.+=-
T Consensus 104 ~~~Gadavlv 113 (306)
T 1o5k_A 104 EKLGANGVLV 113 (306)
T ss_dssp HHHTCSEEEE
T ss_pred HhcCCCEEEE
Confidence 9999998743
No 78
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=84.32 E-value=6.4 Score=34.21 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=67.9
Q ss_pred eEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCH
Q psy965 110 CLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTS 188 (214)
Q Consensus 110 vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~ 188 (214)
++.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|-.+|
T Consensus 14 ~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t- 89 (309)
T 3fkr_A 14 PVVP-TTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAG--RVPVIVTTSHYST- 89 (309)
T ss_dssp CBCC-CCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-
T ss_pred Eeee-CCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEecCCchH-
Confidence 3444 556 5688888888888999999999986444344443333445555555566666654 4789999999966
Q ss_pred HHHHHHHHHHHHcCCCEEEcCC
Q psy965 189 ENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKTST 210 (214)
++..+.++.|.++|+|.+=--+
T Consensus 90 ~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 90 QVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEcC
Confidence 5566888899999999875443
No 79
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=83.81 E-value=7.8 Score=33.24 Aligned_cols=91 Identities=11% Similarity=-0.049 Sum_probs=65.3
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .++||.-+|..+| ++..+
T Consensus 11 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~ 87 (292)
T 2ojp_A 11 TPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADG--RIPVIAGTGANAT-AEAIS 87 (292)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSSH-HHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccH-HHHHH
Confidence 556 5677778887888999999999985444444444433455555556666666664 4789999999855 55667
Q ss_pred HHHHHHHcCCCEEEc
Q psy965 194 ASMTAMFAGSDFIKT 208 (214)
Q Consensus 194 A~~ia~~aGaDFIKT 208 (214)
.++.|.++|+|.+=-
T Consensus 88 la~~a~~~Gadavlv 102 (292)
T 2ojp_A 88 LTQRFNDSGIVGCLT 102 (292)
T ss_dssp HHHHTTTSSCSEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 888999999998743
No 80
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=83.78 E-value=18 Score=32.06 Aligned_cols=91 Identities=8% Similarity=0.106 Sum_probs=64.8
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCC
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 187 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t 187 (214)
+++-+.+.|| ..+.+.-..+++.+++.|.+-+.+=+.. +.+.-.+=++++++++++. +.+++....=-+
T Consensus 139 v~~y~~~~~~---~~~~e~~~~~a~~~~~~G~~~iKiKvG~------~~~~d~~~v~avR~a~g~d--~~l~vDan~~~~ 207 (389)
T 3ozy_A 139 VRAYASSIYW---DLTPDQAADELAGWVEQGFTAAKLKVGR------APRKDAANLRAMRQRVGAD--VEILVDANQSLG 207 (389)
T ss_dssp EEEEEEEECS---SCCHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHHHCTT--SEEEEECTTCCC
T ss_pred eeeEEecCCC---CCCHHHHHHHHHHHHHCCCCEEeeccCC------CHHHHHHHHHHHHHHcCCC--ceEEEECCCCcC
Confidence 6665551244 4566777888999999999999875422 5666677788899988752 455666544337
Q ss_pred HHHHHHHHHHHHHcCCCEEEcC
Q psy965 188 SENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 188 ~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.++..+.++...+.|.+||--+
T Consensus 208 ~~~A~~~~~~l~~~~i~~iEqP 229 (389)
T 3ozy_A 208 RHDALAMLRILDEAGCYWFEEP 229 (389)
T ss_dssp HHHHHHHHHHHHHTTCSEEESC
T ss_pred HHHHHHHHHHHHhcCCCEEECC
Confidence 7777777888888999999644
No 81
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=83.39 E-value=2.5 Score=37.70 Aligned_cols=86 Identities=6% Similarity=0.005 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhh-----------cC--------ChhHHHHHHHHHHHHhcC-CceEEEEEec--
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVL-----------NN--------QWPELFSEVKQMKEKCGE-KIHMKTILAV-- 182 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~-----------sg--------~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt-- 182 (214)
+.-+.-++.|.+.|+|-||+=.--|+|+ .. +...+.+=+++|+++++. +..+|+=...
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~ 240 (365)
T 2gou_A 161 ADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTL 240 (365)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCT
T ss_pred HHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEcccccc
Confidence 3445667788999999999855433332 11 123455557888888874 2344443311
Q ss_pred ----cCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 183 ----GELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 183 ----~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+.. +.++....++.+.++|+|||--|.|
T Consensus 241 ~~~~~~~-~~~~~~~~a~~l~~~G~d~i~v~~~ 272 (365)
T 2gou_A 241 NGTVDAD-PILTYTAAAALLNKHRIVYLHIAEV 272 (365)
T ss_dssp TSCCCSS-HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCC-CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 112 4566777888889999999998876
No 82
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=83.17 E-value=3.9 Score=35.64 Aligned_cols=138 Identities=12% Similarity=-0.030 Sum_probs=82.2
Q ss_pred CCCHHHHHHHHHHhhc-cCchhhhccccccCcccHH---H---HHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHH
Q psy965 61 DDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVW---H---GSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIEL 133 (214)
Q Consensus 61 ~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~---~---a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~ 133 (214)
..+.++..++++.... ++.. ....-.++|.++| . ..+.+.+ ..++++++. + |. ...++.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~--IE~g~~~~~~~~p~~~d~~~~~~~~~~-~~~~~~~~l-~--~~--------~~~i~~ 89 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSY--IEITSFVHPKWIPALRDAIDVAKGIDR-EKGVTYAAL-V--PN--------QRGLEN 89 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSE--EEEEECSCTTTCGGGTTHHHHHHHSCC-CTTCEEEEE-C--CS--------HHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCE--EEECCCcCcccccccCCHHHHHHHhhh-cCCCeEEEE-e--CC--------HHhHHH
Confidence 4577777777776654 2320 0000133443333 2 2233332 246666665 3 41 347899
Q ss_pred HHHCCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcC-CceEEEEEeccC------CCCHHHHHHHHHHHHHc
Q psy965 134 LAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGE------LKTSENIYCASMTAMFA 201 (214)
Q Consensus 134 Ai~~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~------L~t~e~i~~A~~ia~~a 201 (214)
|++.|+++|.+++..+.. +....++..+.+..+++.+.. +..+.+-+.+.. -.+.+.+.+.++.+.++
T Consensus 90 a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (307)
T 1ydo_A 90 ALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEF 169 (307)
T ss_dssp HHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHH
T ss_pred HHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhc
Confidence 999999999999877653 234567777788877777653 234443343321 12678889999999999
Q ss_pred CCCEE--EcCCCC
Q psy965 202 GSDFI--KTSGSI 212 (214)
Q Consensus 202 GaDFI--KTSTGf 212 (214)
|+|-| +-+.|.
T Consensus 170 Ga~~i~l~DT~G~ 182 (307)
T 1ydo_A 170 GISELSLGDTIGA 182 (307)
T ss_dssp TCSCEEEECSSCC
T ss_pred CCCEEEEcCCCCC
Confidence 99974 444553
No 83
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=82.79 E-value=5.5 Score=35.09 Aligned_cols=82 Identities=11% Similarity=0.139 Sum_probs=53.6
Q ss_pred HHHHHHHHCCCCEEEEecChhHhh----cC---------------ChhHHHHHHHHHHHHhcCCceEEEEEec---cCCC
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVL----NN---------------QWPELFSEVKQMKEKCGEKIHMKTILAV---GELK 186 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~----sg---------------~~~~v~~Ei~~v~~a~~~~~~lKvIlEt---~~L~ 186 (214)
.-++.|.+.|.|-||+=.--|+|+ |- +...+.+=+++|+++++-+..+|+=... +-.
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~- 226 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGL- 226 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSC-
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC-
Confidence 446778889999999875544433 11 2234556667888888323445543321 113
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+.++....++...++|+|||-.|.|
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g 251 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSG 251 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecC
Confidence 4567778888999999999998865
No 84
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=82.38 E-value=3.7 Score=36.88 Aligned_cols=67 Identities=16% Similarity=0.238 Sum_probs=45.3
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
..++.+++.|++-| ++|.. .|+.+.+.+-|+.+++..++ ++||.-+. . |.++. +.+.++|+|||+.
T Consensus 111 ~~~~~lieaGvd~I--~idta---~G~~~~~~~~I~~ik~~~p~---v~Vi~G~v-~-t~e~A----~~a~~aGAD~I~v 176 (366)
T 4fo4_A 111 ERVKALVEAGVDVL--LIDSS---HGHSEGVLQRIRETRAAYPH---LEIIGGNV-A-TAEGA----RALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHTTCSEE--EEECS---CTTSHHHHHHHHHHHHHCTT---CEEEEEEE-C-SHHHH----HHHHHHTCSEEEE
T ss_pred HHHHHHHhCCCCEE--EEeCC---CCCCHHHHHHHHHHHHhcCC---CceEeeee-C-CHHHH----HHHHHcCCCEEEE
Confidence 45778899999864 44432 24566777788888887644 56666433 2 65554 4567889999998
Q ss_pred C
Q psy965 209 S 209 (214)
Q Consensus 209 S 209 (214)
+
T Consensus 177 G 177 (366)
T 4fo4_A 177 G 177 (366)
T ss_dssp C
T ss_pred e
Confidence 3
No 85
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=82.32 E-value=4.4 Score=34.99 Aligned_cols=92 Identities=15% Similarity=0.015 Sum_probs=64.3
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHH
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 194 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A 194 (214)
+=|+.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..+| ++..+.
T Consensus 11 TPf~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~l 87 (297)
T 2rfg_A 11 TPFINGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQG--RVPVIAGAGSNNP-VEAVRY 87 (297)
T ss_dssp CCEETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSH-HHHHHH
T ss_pred cCcCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCC--CCeEEEccCCCCH-HHHHHH
Confidence 5565576777777788999999999884333333333333455555555666666664 4789999999855 556688
Q ss_pred HHHHHHcCCCEEEcC
Q psy965 195 SMTAMFAGSDFIKTS 209 (214)
Q Consensus 195 ~~ia~~aGaDFIKTS 209 (214)
++.|.++|+|.+=-.
T Consensus 88 a~~A~~~Gadavlv~ 102 (297)
T 2rfg_A 88 AQHAQQAGADAVLCV 102 (297)
T ss_dssp HHHHHHHTCSEEEEC
T ss_pred HHHHHhcCCCEEEEc
Confidence 889999999987543
No 86
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=82.29 E-value=6.5 Score=35.11 Aligned_cols=69 Identities=9% Similarity=-0.005 Sum_probs=49.4
Q ss_pred HCCCCEEEEecC---h--hHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC-CCEEEc
Q psy965 136 KQKVDEVDIVIQ---R--SLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG-SDFIKT 208 (214)
Q Consensus 136 ~~GAdEID~Vin---~--~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG-aDFIKT 208 (214)
+.|+|.||+=+. . +.-+..+.+.+.+=+++++++...+..+|+-. .+ +.+++.++++++.++| +|+|-.
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p---~~-d~~~~~~~a~~~~~~Gg~d~I~~ 227 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPP---YF-DFAHFDAAAEILNEFPKVQFITC 227 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECC---CC-SHHHHHHHHHHHHTCTTEEEEEE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecC---CC-CHHHHHHHHHHHHhCCCccEEEE
Confidence 368999876332 1 11223467888888888988876447788764 35 6788999999999998 999963
No 87
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=82.03 E-value=2.3 Score=37.63 Aligned_cols=63 Identities=22% Similarity=0.320 Sum_probs=41.6
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEec-cCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV-GELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt-~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
+.|+++|++.|||-|-+ =|. .. +++++.++...+ ++++|. |=+ |.+++.. -.+.|+|||
T Consensus 217 l~e~~eAl~aGaDiImL-Dn~--------s~--~~l~~av~~~~~----~v~leaSGGI-t~~~i~~----~A~tGVD~I 276 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILL-DNM--------SI--SEIKKAVDIVNG----KSVLEVSGCV-NIRNVRN----IALTGVDYI 276 (300)
T ss_dssp HHHHHHHHHTTCSEEEE-ESC--------CH--HHHHHHHHHHTT----SSEEEEESSC-CTTTHHH----HHTTTCSEE
T ss_pred HHHHHHHHHcCCCEEEE-CCC--------CH--HHHHHHHHhhcC----ceEEEEECCC-CHHHHHH----HHHcCCCEE
Confidence 48999999999986532 122 22 677777766654 344554 557 7788754 336899999
Q ss_pred EcCC
Q psy965 207 KTSG 210 (214)
Q Consensus 207 KTST 210 (214)
.++.
T Consensus 277 svGa 280 (300)
T 3l0g_A 277 SIGC 280 (300)
T ss_dssp ECGG
T ss_pred EeCc
Confidence 8763
No 88
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=81.84 E-value=7.2 Score=33.78 Aligned_cols=91 Identities=9% Similarity=0.000 Sum_probs=62.9
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..++ ++..+
T Consensus 24 TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~ 100 (307)
T 3s5o_A 24 TPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPK--NRLLLAGSGCEST-QATVE 100 (307)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCT--TSEEEEECCCSSH-HHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCC--CCcEEEecCCCCH-HHHHH
Confidence 556 5677777777778999999998886444333433333344444445555555543 5789999999856 55558
Q ss_pred HHHHHHHcCCCEEEc
Q psy965 194 ASMTAMFAGSDFIKT 208 (214)
Q Consensus 194 A~~ia~~aGaDFIKT 208 (214)
.++.|.++|+|.+=-
T Consensus 101 la~~A~~~Gadavlv 115 (307)
T 3s5o_A 101 MTVSMAQVGADAAMV 115 (307)
T ss_dssp HHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 888999999998754
No 89
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=81.59 E-value=2.8 Score=37.59 Aligned_cols=86 Identities=9% Similarity=0.082 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhh----c---------------CChhHHHHHHHHHHHHhcC-CceEEEEEec--
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVL----N---------------NQWPELFSEVKQMKEKCGE-KIHMKTILAV-- 182 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~----s---------------g~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt-- 182 (214)
+.=+.-++.|.+.|+|-||+=.--|+|+ + ++...+.+=+++|+++++. +..+|+=...
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~ 245 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLEL 245 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEecccccc
Confidence 3445667788899999999855444333 1 1223455667888888874 2344432110
Q ss_pred ----cCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 183 ----GELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 183 ----~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+-. +.++....++.+.++|+|||--|.|
T Consensus 246 ~~~~~~~-~~~~~~~la~~le~~Gvd~i~v~~~ 277 (377)
T 2r14_A 246 FGLTDDE-PEAMAFYLAGELDRRGLAYLHFNEP 277 (377)
T ss_dssp TTCCCSC-HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCCCCC-CHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 112 3466777888889999999998876
No 90
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=81.52 E-value=3.5 Score=32.70 Aligned_cols=81 Identities=9% Similarity=0.068 Sum_probs=52.2
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCC
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 187 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t 187 (214)
.+++.+ +.-. .. .=...++.+.+.|++-|-++. ++.....+.+.++++++.+.. ..+.+++.
T Consensus 15 ~~l~~I-t~~~---~~--~~~~~~~~~~~~G~~~i~l~~-----~~~~~~~~~~~~~~l~~~~~~-~~v~v~v~------ 76 (215)
T 1xi3_A 15 LKLYVI-TDRR---LK--PEVESVREALEGGATAIQMRI-----KNAPTREMYEIGKTLRQLTRE-YDALFFVD------ 76 (215)
T ss_dssp TSEEEE-CCTT---TS--CHHHHHHHHHHTTCSEEEECC-----CSCCHHHHHHHHHHHHHHHHH-TTCEEEEE------
T ss_pred CCEEEE-ECCc---hh--hHHHHHHHHHHCCCCEEEECC-----CCCCHHHHHHHHHHHHHHHHH-cCCeEEEc------
Confidence 467777 5422 22 223567888899999987775 234556667777777776653 34567764
Q ss_pred HHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 188 SENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 188 ~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+.+ +.+.++|+|+|-.+.+
T Consensus 77 -~~~----~~a~~~gad~v~l~~~ 95 (215)
T 1xi3_A 77 -DRV----DVALAVDADGVQLGPE 95 (215)
T ss_dssp -SCH----HHHHHHTCSEEEECTT
T ss_pred -ChH----HHHHHcCCCEEEECCc
Confidence 112 4677889999976543
No 91
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=81.35 E-value=7.9 Score=33.20 Aligned_cols=91 Identities=12% Similarity=-0.054 Sum_probs=64.0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHH
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 194 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A 194 (214)
+=|+.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..+| ++..+.
T Consensus 11 TPf~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~g--r~pviaGvg~~~t-~~ai~l 87 (292)
T 2vc6_A 11 TPFADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANG--RVPVIAGAGSNST-AEAIAF 87 (292)
T ss_dssp CCEETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCBEEECCCSSH-HHHHHH
T ss_pred cCcCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEecCCccH-HHHHHH
Confidence 5565677777777788999999999884333333333333455555556666666654 4789999999855 556688
Q ss_pred HHHHHHcCCCEEEc
Q psy965 195 SMTAMFAGSDFIKT 208 (214)
Q Consensus 195 ~~ia~~aGaDFIKT 208 (214)
++.|.++|+|.+=-
T Consensus 88 a~~A~~~Gadavlv 101 (292)
T 2vc6_A 88 VRHAQNAGADGVLI 101 (292)
T ss_dssp HHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 88999999998743
No 92
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=81.01 E-value=11 Score=32.53 Aligned_cols=82 Identities=11% Similarity=0.014 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhcCC--ceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEK--IHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~~~--~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
...+.=+..+++.++.|||-||+=.--. .-| ..-...+|+..+......- ..+.+-+.|-.- ...+.|
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgest--rpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~-------~va~aA 96 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESS--RPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRA-------DVARAA 96 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC----------------HHHHHHHHHHHHHTTCCEEEECSCH-------HHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccC--CCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCH-------HHHHHH
Confidence 3577778899999999999999974221 001 1112234444443332210 124456666522 345667
Q ss_pred HHcCCCEEEcCCCC
Q psy965 199 MFAGSDFIKTSGSI 212 (214)
Q Consensus 199 ~~aGaDFIKTSTGf 212 (214)
.++|+|.|.--||+
T Consensus 97 l~aGa~iINdvsg~ 110 (280)
T 1eye_A 97 LQNGAQMVNDVSGG 110 (280)
T ss_dssp HHTTCCEEEETTTT
T ss_pred HHcCCCEEEECCCC
Confidence 77899999987775
No 93
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=80.87 E-value=5.3 Score=35.53 Aligned_cols=86 Identities=10% Similarity=0.089 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhhc-------------------CChhHHHHHHHHHHHHhcCC-ceEEEEEec--
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVLN-------------------NQWPELFSEVKQMKEKCGEK-IHMKTILAV-- 182 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~s-------------------g~~~~v~~Ei~~v~~a~~~~-~~lKvIlEt-- 182 (214)
+.-+.-++.|.+.|+|-|++=.--|+|++ ++...+.+=+++|++++++. ..+|+=...
T Consensus 161 ~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~ 240 (364)
T 1vyr_A 161 NDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTF 240 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccc
Confidence 34456677889999999997554443321 11234555578888888752 333333221
Q ss_pred -----cCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 183 -----GELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 183 -----~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+.. +.++....++.+.++|+|||--|.|
T Consensus 241 ~~~~~~~~-~~~~~~~~a~~l~~~G~d~i~v~~~ 273 (364)
T 1vyr_A 241 QNVDNGPN-EEADALYLIEELAKRGIAYLHMSET 273 (364)
T ss_dssp TTBCCCTT-HHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred ccccCCCC-CHHHHHHHHHHHHHhCCCEEEEecC
Confidence 112 4456667788888999999998765
No 94
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=80.61 E-value=2.9 Score=36.84 Aligned_cols=82 Identities=12% Similarity=-0.024 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-eccCCCCHHHHHHHHHHHHHcCC
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-AVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-Et~~L~t~e~i~~A~~ia~~aGa 203 (214)
+.=+..+++.++.|||-||+-.- +.=-.+..-...+|++.+...... .-+-+.| .|| +.|.-.+..+.|.++|+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~-StrP~~~~vs~eee~~vV~~v~~~-~~vplsI~DT~---~~~~~~~V~eaal~aga 148 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLV-SAHPDGQNRSGAELAEVCKAVADA-IDVPLMIIGCG---VEEKDAEIFPVIGEALS 148 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECG-GGCTTTTCCCHHHHHHHHHHHHHH-CSSCEEEECCS---CHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCc-cCCCCCCCCCHHHHHHHHHHHHHh-CCceEEEECCC---CCCCCHHHHHHHHHhCC
Confidence 45566788999999999999764 111112233445555544433322 1244567 776 45666777888999999
Q ss_pred C---EEEcCCC
Q psy965 204 D---FIKTSGS 211 (214)
Q Consensus 204 D---FIKTSTG 211 (214)
| .|..-||
T Consensus 149 ~~k~iINdvs~ 159 (310)
T 2h9a_B 149 GRNCLLSSATK 159 (310)
T ss_dssp TSCCEEEEECT
T ss_pred CCCCEEEECCC
Confidence 8 8876565
No 95
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=80.58 E-value=10 Score=32.72 Aligned_cols=137 Identities=11% Similarity=0.011 Sum_probs=81.7
Q ss_pred CCCHHHHHHHHHHhhc-cCchhhhccccccCcccHHHHH---HhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHH
Q psy965 61 DDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVWHGS---DNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAK 136 (214)
Q Consensus 61 ~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~~a~---~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~ 136 (214)
..+.++..++++.-.+ +|. ..-+.+|.+.+.-. +.+.+...++++++.+ | +. ...++.+++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~-----~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~---~-~~------~~di~~a~~ 87 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGID-----VIEAGFPISSPGDFECVKAIAKAIKHCSVTGLA---R-CV------EGDIDRAEE 87 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCS-----EEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEE---E-SS------HHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCC-----EEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEe---c-CC------HHHHHHHHH
Confidence 4566666666665443 222 11144554443111 1121113466776662 2 11 123455555
Q ss_pred ----CCCCEEEEecChhHhh-----cCChhHHHHHHHHHHHHhcC-CceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 137 ----QKVDEVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 137 ----~GAdEID~Vin~~~l~-----sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
.|+++|.+++..+-.. ....++..+.+..+++.+.. +..+-+=+|.+.-.+.+.+.+.++.+.++|+|-|
T Consensus 88 ~~~~ag~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i 167 (293)
T 3ewb_X 88 ALKDAVSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVI 167 (293)
T ss_dssp HHTTCSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEE
T ss_pred HHhhcCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 6999999998776543 45678888888888887754 2445555665444477888899999999999965
Q ss_pred --EcCCCC
Q psy965 207 --KTSGSI 212 (214)
Q Consensus 207 --KTSTGf 212 (214)
+-++|.
T Consensus 168 ~l~DT~G~ 175 (293)
T 3ewb_X 168 NIPDTVGY 175 (293)
T ss_dssp EEECSSSC
T ss_pred EecCCCCC
Confidence 344443
No 96
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=79.89 E-value=4.8 Score=34.83 Aligned_cols=90 Identities=10% Similarity=-0.020 Sum_probs=63.0
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|-.++ ++..+
T Consensus 14 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~ 90 (300)
T 3eb2_A 14 SPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQR--RVPVVAGVASTSV-ADAVA 90 (300)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTT--SSCBEEEEEESSH-HHHHH
T ss_pred ccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCC--CCcEEEeCCCCCH-HHHHH
Confidence 566 5787788888888999999999885222222333333445555555566666654 4789999999855 55668
Q ss_pred HHHHHHHcCCCEEE
Q psy965 194 ASMTAMFAGSDFIK 207 (214)
Q Consensus 194 A~~ia~~aGaDFIK 207 (214)
.++.|.++|+|.+=
T Consensus 91 la~~a~~~Gadavl 104 (300)
T 3eb2_A 91 QAKLYEKLGADGIL 104 (300)
T ss_dssp HHHHHHHHTCSEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 88999999999874
No 97
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=79.87 E-value=7.3 Score=36.04 Aligned_cols=79 Identities=16% Similarity=0.138 Sum_probs=52.3
Q ss_pred HHHHHHHHCCCCEEEEe-----cChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 129 HEIELLAKQKVDEVDIV-----IQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~V-----in~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
.+++.+.+.|||-|.+- +..+....|--..-.+-+..++++++. ..+-||-.-|- .+.+++.+| +.+||
T Consensus 282 e~a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~-~~iPVIa~GGI-~~~~di~ka----l~~GA 355 (490)
T 4avf_A 282 EAAKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEG-TGVPLIADGGI-RFSGDLAKA----MVAGA 355 (490)
T ss_dssp HHHHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT-TTCCEEEESCC-CSHHHHHHH----HHHTC
T ss_pred HHHHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhcc-CCCcEEEeCCC-CCHHHHHHH----HHcCC
Confidence 57899999999999863 222222333212234556677777754 34677777774 488888765 45699
Q ss_pred CEEEcCCCCC
Q psy965 204 DFIKTSGSIQ 213 (214)
Q Consensus 204 DFIKTSTGf~ 213 (214)
|+|--+|.|.
T Consensus 356 d~V~vGs~~~ 365 (490)
T 4avf_A 356 YCVMMGSMFA 365 (490)
T ss_dssp SEEEECTTTT
T ss_pred CeeeecHHHh
Confidence 9999888764
No 98
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=79.87 E-value=12 Score=33.14 Aligned_cols=80 Identities=9% Similarity=0.001 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHCCCC-EEEEecChh-------HhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHH
Q psy965 124 LETRLHEIELLAKQKVD-EVDIVIQRS-------LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCAS 195 (214)
Q Consensus 124 ~~~K~~E~~~Ai~~GAd-EID~Vin~~-------~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~ 195 (214)
.+.=+.-++..-+.|++ .||+ |++ .-+..+.+.+.+=++++++++..+..+|+=.. + +.+++.+++
T Consensus 140 ~~d~~~~a~~l~~~g~~d~iel--NisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~---~-~~~~~a~~~ 213 (345)
T 3oix_A 140 PEETHTILXMVEASKYQGLVEL--NLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY---F-DIVHFDQAA 213 (345)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEE--ECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC---C-CHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcEEEE--ecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC---C-CHHHHHHHH
Confidence 33333334444446876 7665 544 12234667777777777776654467777543 5 778898888
Q ss_pred HHHHHcCCCEEEcC
Q psy965 196 MTAMFAGSDFIKTS 209 (214)
Q Consensus 196 ~ia~~aGaDFIKTS 209 (214)
+.+-..|.++|.|.
T Consensus 214 ~~aga~~i~~int~ 227 (345)
T 3oix_A 214 AIFNXYPLTFVNCI 227 (345)
T ss_dssp HHHTTSCCSEEEEC
T ss_pred HHhCCCceEEEEee
Confidence 88888888988776
No 99
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=79.60 E-value=7.7 Score=35.99 Aligned_cols=68 Identities=18% Similarity=0.276 Sum_probs=46.9
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++.+++.|+|-|.+ |.. .|+...+.+-++.+++..++ +.||. +-..+.+. ++.+.++|+|+|+
T Consensus 233 ~~~a~~l~~aG~d~I~i--d~a---~g~~~~~~~~i~~ir~~~p~---~~Vi~--g~v~t~e~----a~~l~~aGaD~I~ 298 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLI--DSS---HGHSEGVLQRIRETRAAYPH---LEIIG--GNVATAEG----ARALIEAGVSAVK 298 (496)
T ss_dssp HHHHHHHHHTTCSEEEE--ECS---CTTSHHHHHHHHHHHHHCTT---CCEEE--EEECSHHH----HHHHHHHTCSEEE
T ss_pred HHHHHHHHhccCceEEe--ccc---cccchHHHHHHHHHHHHCCC---ceEEE--cccCcHHH----HHHHHHhCCCEEE
Confidence 44577888899997544 443 36778888999999988754 33444 32335443 4667889999999
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
-+
T Consensus 299 Vg 300 (496)
T 4fxs_A 299 VG 300 (496)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 100
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=79.52 E-value=11 Score=33.02 Aligned_cols=81 Identities=9% Similarity=0.056 Sum_probs=57.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
+.+.-..+++.+.+.|.+-+.+= .|. ++.+...+=++++++++|+.. .+.+....--+.++..+.++...+.|
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik--~g~---~~~~~~~e~v~avr~a~G~d~--~l~vDan~~~~~~~a~~~~~~l~~~~ 218 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMK--VGR---PDLKEDVDRVSALREHLGDSF--PLMVDANMKWTVDGAIRAARALAPFD 218 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE--CCC---SSHHHHHHHHHHHHHHHCTTS--CEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--CCC---CCHHHHHHHHHHHHHHhCCCC--eEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 56667789999999999999853 321 355666777889999887533 34555433226777777777778899
Q ss_pred CCEEEcCC
Q psy965 203 SDFIKTSG 210 (214)
Q Consensus 203 aDFIKTST 210 (214)
.+||--+.
T Consensus 219 i~~iEqP~ 226 (371)
T 2ovl_A 219 LHWIEEPT 226 (371)
T ss_dssp CSEEECCS
T ss_pred CCEEECCC
Confidence 99997554
No 101
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=79.46 E-value=3.8 Score=36.74 Aligned_cols=85 Identities=6% Similarity=-0.031 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHCCCCEEEEecChhHhh----c-------C--------ChhHHHHHHHHHHHHhcC-CceEEEEEe-c--
Q psy965 126 TRLHEIELLAKQKVDEVDIVIQRSLVL----N-------N--------QWPELFSEVKQMKEKCGE-KIHMKTILA-V-- 182 (214)
Q Consensus 126 ~K~~E~~~Ai~~GAdEID~Vin~~~l~----s-------g--------~~~~v~~Ei~~v~~a~~~-~~~lKvIlE-t-- 182 (214)
.=..-++.|.+.|.|-||+=.--|+|+ | . +...+.+=+++|+++++. +..+|+=.. .
T Consensus 168 ~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~ 247 (376)
T 1icp_A 168 EFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYN 247 (376)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTT
T ss_pred HHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccC
Confidence 445567888999999999766544433 1 1 123355667888888875 233443211 0
Q ss_pred ---cCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 183 ---GELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 183 ---~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+.. +.++....++.+.++|+|||--|.|
T Consensus 248 g~~~~~-~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 248 EAGDTN-PTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp TCCCSC-HHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred CCCCCC-CHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 111 3445667788888999999988766
No 102
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=79.15 E-value=3.2 Score=33.04 Aligned_cols=58 Identities=16% Similarity=0.204 Sum_probs=36.3
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.|++.|++.|||-| +..+.. .+ +.+.|+. .-+.+|.+. . |.+++. .+.+.|+|+||.
T Consensus 74 ~~~~~a~~~Gad~i-v~~~~~-----------~~---~~~~~~~-~g~~vi~g~--~-t~~e~~----~a~~~Gad~vk~ 130 (205)
T 1wa3_A 74 EQCRKAVESGAEFI-VSPHLD-----------EE---ISQFCKE-KGVFYMPGV--M-TPTELV----KAMKLGHTILKL 130 (205)
T ss_dssp HHHHHHHHHTCSEE-ECSSCC-----------HH---HHHHHHH-HTCEEECEE--C-SHHHHH----HHHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEE-EcCCCC-----------HH---HHHHHHH-cCCcEECCc--C-CHHHHH----HHHHcCCCEEEE
Confidence 47899999999988 444322 12 2233332 235666643 3 666655 457899999996
Q ss_pred C
Q psy965 209 S 209 (214)
Q Consensus 209 S 209 (214)
.
T Consensus 131 ~ 131 (205)
T 1wa3_A 131 F 131 (205)
T ss_dssp T
T ss_pred c
Confidence 4
No 103
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=79.11 E-value=20 Score=30.11 Aligned_cols=83 Identities=18% Similarity=0.096 Sum_probs=48.1
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecChh---------------HhhcCC-hhHHHHHHHHHHHHhcCCceEEEEEec
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQRS---------------LVLNNQ-WPELFSEVKQMKEKCGEKIHMKTILAV 182 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~---------------~l~sg~-~~~v~~Ei~~v~~a~~~~~~lKvIlEt 182 (214)
.|....+.....++...+.|||.|.+=++.+ ++..|- .+...+-++++++...+ .+ +++-
T Consensus 25 ~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~-~P--v~lm- 100 (268)
T 1qop_A 25 LGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPT-IP--IGLL- 100 (268)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSS-SC--EEEE-
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCC-CC--EEEE-
Confidence 5555566777778888888888777755443 233342 35566778888775222 33 4431
Q ss_pred cCCCCHH---HHHHHHHHHHHcCCCEE
Q psy965 183 GELKTSE---NIYCASMTAMFAGSDFI 206 (214)
Q Consensus 183 ~~L~t~e---~i~~A~~ia~~aGaDFI 206 (214)
++. +.- -..+-++.+.++|+|.|
T Consensus 101 ~y~-n~v~~~g~~~~~~~~~~aGadgi 126 (268)
T 1qop_A 101 MYA-NLVFNNGIDAFYARCEQVGVDSV 126 (268)
T ss_dssp ECH-HHHHTTCHHHHHHHHHHHTCCEE
T ss_pred Ecc-cHHHHhhHHHHHHHHHHcCCCEE
Confidence 222 110 01356677888899854
No 104
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=79.09 E-value=7.4 Score=34.81 Aligned_cols=83 Identities=14% Similarity=0.121 Sum_probs=53.3
Q ss_pred HHHHHHHHCCCCEEEEecChhHhh----cC---------------ChhHHHHHHHHHHHHhcC-CceEEEEEecc--CC-
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVL----NN---------------QWPELFSEVKQMKEKCGE-KIHMKTILAVG--EL- 185 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~----sg---------------~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~--~L- 185 (214)
.-++.|.+.|.|-|++=.--|+|+ |. +...+.+=+++|+++++. +..+|+=.... ..
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 346778899999999977665554 11 223556667888888875 23334322100 01
Q ss_pred --CCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 186 --KTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 186 --~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
.+.++....++.+.++|+|||--|.|
T Consensus 237 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 264 (362)
T 4ab4_A 237 DADRAETFTYVARELGKRGIAFICSRER 264 (362)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCcHHHHHHHHHHHHHhCCCEEEECCC
Confidence 12355677888888999999988766
No 105
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=78.97 E-value=5.7 Score=34.79 Aligned_cols=97 Identities=10% Similarity=0.107 Sum_probs=55.5
Q ss_pred CCCeEEEecC-----CCCCCC--CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHH---HHhcCCceE
Q psy965 107 YQPCLSQPAG-----FPSGQY--LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMK---EKCGEKIHM 176 (214)
Q Consensus 107 ~v~vatV~ig-----FP~G~~--~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~---~a~~~~~~l 176 (214)
...|-.+ ++ |.-|.. ..+.=+..+++.++.|||-||+-.--..-- ...-...+|+..+. ++.....-+
T Consensus 39 ~~~iMgi-lNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPg-a~~v~~~eE~~RvvpvI~~l~~~~~v 116 (297)
T 1tx2_A 39 KTLIMGI-LNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPG-FAKVSVEEEIKRVVPMIQAVSKEVKL 116 (297)
T ss_dssp SCEEEEE-CCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC-----CCCCCHHHHHHHHHHHHHHHHHHSCS
T ss_pred CCEEEEE-EeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCC-CCCCCHHHHHHHHHHHHHHHHhcCCc
Confidence 4555555 44 555543 356667788999999999999985221111 11223456666555 322210124
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 177 KTILAVGELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 177 KvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+.|.|. . -++ .+.|.++|++.|.--+|+
T Consensus 117 piSIDT~---~-~~V---~~aAl~aGa~iINdvsg~ 145 (297)
T 1tx2_A 117 PISIDTY---K-AEV---AKQAIEAGAHIINDIWGA 145 (297)
T ss_dssp CEEEECS---C-HHH---HHHHHHHTCCEEEETTTT
T ss_pred eEEEeCC---C-HHH---HHHHHHcCCCEEEECCCC
Confidence 5677775 2 223 445556699999877775
No 106
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=78.95 E-value=9.4 Score=31.95 Aligned_cols=90 Identities=14% Similarity=0.111 Sum_probs=56.2
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE------e
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL------A 181 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl------E 181 (214)
.+||+.+ .|..+.+.-+.+++.+.+.|||-|++-+|+ +..-+++.+.+-+..+++.+++ +.+|+ |
T Consensus 4 p~Icvpi----~~~~~~~e~~~~~~~~~~~~~D~vElRvD~--l~~~~~~~v~~~~~~lr~~~~~---~PiI~T~R~~~e 74 (238)
T 1sfl_A 4 VEVVATI----TPQLSIEETLIQKINHRIDAIDVLELRIDQ--FENVTVDQVAEMITKLKVMQDS---FKLLVTYRTKLQ 74 (238)
T ss_dssp CEEEEEE----CCCC---CHHHHHHHHTTTTCSEEEEECTT--STTCCHHHHHHHHHHHC---CC---SEEEEECCBGGG
T ss_pred CeEEEEe----cCCCCHHHHHHHHHHhhhcCCCEEEEEecc--cccCCHHHHHHHHHHHHHhccC---CCEEEEeecccc
Confidence 4566664 332344444668888999999999999997 3333577777777777776643 34454 5
Q ss_pred ccCCC-CHHHHHHHHHHHHHc-CCCEE
Q psy965 182 VGELK-TSENIYCASMTAMFA-GSDFI 206 (214)
Q Consensus 182 t~~L~-t~e~i~~A~~ia~~a-GaDFI 206 (214)
-|... ++++-.+.-+.+++. |+|||
T Consensus 75 GG~~~~~~~~~~~ll~~~~~~~~~d~i 101 (238)
T 1sfl_A 75 GGYGQFTNDSYLNLISDLANINGIDMI 101 (238)
T ss_dssp TSCBCCCHHHHHHHHHHGGGCTTCCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 55432 445555677777776 69998
No 107
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=78.88 E-value=12 Score=32.50 Aligned_cols=98 Identities=12% Similarity=-0.016 Sum_probs=69.1
Q ss_pred CCCeEEEecCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 107 YQPCLSQPAGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
++-.+.+ +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|..
T Consensus 10 Gv~~a~v-TPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpViaGvg~~ 86 (311)
T 3h5d_A 10 KIITAFI-TPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNG--RVPLIAGVGTN 86 (311)
T ss_dssp CEEEECC-CCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCS--SSCEEEECCCS
T ss_pred ceEEeee-cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCc
Confidence 3433444 667 6677777777788999999999986555455544444555555556666666654 58899999998
Q ss_pred CCHHHHHHHHHHHHHcCC-CEEEc
Q psy965 186 KTSENIYCASMTAMFAGS-DFIKT 208 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGa-DFIKT 208 (214)
++ ++..+.++.|.++|+ |.|=-
T Consensus 87 ~t-~~ai~la~~A~~~Ga~davlv 109 (311)
T 3h5d_A 87 DT-RDSIEFVKEVAEFGGFAAGLA 109 (311)
T ss_dssp SH-HHHHHHHHHHHHSCCCSEEEE
T ss_pred CH-HHHHHHHHHHHhcCCCcEEEE
Confidence 55 566688889999997 97743
No 108
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=78.32 E-value=8.4 Score=33.52 Aligned_cols=98 Identities=14% Similarity=0.083 Sum_probs=66.6
Q ss_pred CCCeEEEecCC-C-CCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccC
Q psy965 107 YQPCLSQPAGF-P-SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 184 (214)
Q Consensus 107 ~v~vatV~igF-P-~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~ 184 (214)
++-.+.+ +=| + .|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.+++-.+=++.+++.+++ .+.||.-+|.
T Consensus 14 Gv~~a~v-TPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~g--rvpViaGvg~ 90 (316)
T 3e96_A 14 TISGIPI-TPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHG--RALVVAGIGY 90 (316)
T ss_dssp SEEECCC-CCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSEEEEEECS
T ss_pred ceEEeee-CCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCC--CCcEEEEeCc
Confidence 4443444 667 5 687888888888999999999874333233333333445555555666666664 4789999995
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 185 LKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++ ++..+.++.|.++|+|.+=-.
T Consensus 91 -~t-~~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 91 -AT-STAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp -SH-HHHHHHHHHHHHHTCSEEEEC
T ss_pred -CH-HHHHHHHHHHHhcCCCEEEEc
Confidence 55 566688899999999988543
No 109
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=78.18 E-value=7.3 Score=34.04 Aligned_cols=68 Identities=18% Similarity=0.148 Sum_probs=46.5
Q ss_pred HHHHHHHHCC--CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 129 HEIELLAKQK--VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 129 ~E~~~Ai~~G--AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
..++.+++.| ++-|++ |.+ .|+.....+.|+.+++.++....+| -+.. +.+ .++.+.++|+|+|
T Consensus 109 ~~a~~~~~~g~~~~~i~i--~~~---~G~~~~~~~~i~~lr~~~~~~~vi~----G~v~-s~e----~A~~a~~aGad~I 174 (336)
T 1ypf_A 109 EFVQQLAAEHLTPEYITI--DIA---HGHSNAVINMIQHIKKHLPESFVIA----GNVG-TPE----AVRELENAGADAT 174 (336)
T ss_dssp HHHHHHHHTTCCCSEEEE--ECS---SCCSHHHHHHHHHHHHHCTTSEEEE----EEEC-SHH----HHHHHHHHTCSEE
T ss_pred HHHHHHHhcCCCCCEEEE--ECC---CCCcHHHHHHHHHHHHhCCCCEEEE----CCcC-CHH----HHHHHHHcCCCEE
Confidence 4577888899 887654 442 3778888899999999876422232 1123 533 3567789999999
Q ss_pred EcCC
Q psy965 207 KTSG 210 (214)
Q Consensus 207 KTST 210 (214)
..|+
T Consensus 175 vvs~ 178 (336)
T 1ypf_A 175 KVGI 178 (336)
T ss_dssp EECS
T ss_pred EEec
Confidence 9865
No 110
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=78.03 E-value=20 Score=30.62 Aligned_cols=89 Identities=12% Similarity=0.053 Sum_probs=58.0
Q ss_pred cCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igFP~-G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
.|.|. |..+.+.=+.-++.+.+.||++|=+.=-.|. .....+++=++.+++..++ .+ |+.-.=+|...-..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~-~~----i~~H~Hn~~Gla~A 216 (298)
T 2cw6_A 145 LGCPYEGKISPAKVAEVTKKFYSMGCYEISLGDTIGV---GTPGIMKDMLSAVMQEVPL-AA----LAVHCHDTYGQALA 216 (298)
T ss_dssp TCBTTTBSCCHHHHHHHHHHHHHTTCSEEEEEETTSC---CCHHHHHHHHHHHHHHSCG-GG----EEEEEBCTTSCHHH
T ss_pred eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCCC-Ce----EEEEECCCCchHHH
Confidence 45575 4556666666688889999999877744453 4678888888888876643 22 23222222222233
Q ss_pred HHHHHHHcCCCEEEcCCC
Q psy965 194 ASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 194 A~~ia~~aGaDFIKTSTG 211 (214)
-+..|+++|+++|-+|-+
T Consensus 217 n~laA~~aGa~~vd~tv~ 234 (298)
T 2cw6_A 217 NTLMALQMGVSVVDSSVA 234 (298)
T ss_dssp HHHHHHHTTCCEEEEBTT
T ss_pred HHHHHHHhCCCEEEeecc
Confidence 467888999999988643
No 111
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=77.97 E-value=6.8 Score=36.35 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=51.8
Q ss_pred HHHHHHHHCCCCEEEEe-----cChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 129 HEIELLAKQKVDEVDIV-----IQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~V-----in~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
.+++.+++.|||-|.+- +.......|--..-..-+..++++++. ..+-||-.-| ..+.+++.+| +.+||
T Consensus 284 e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~-~~iPVIa~GG-I~~~~di~ka----la~GA 357 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE-YGIPVIADGG-IRFSGDISKA----IAAGA 357 (496)
T ss_dssp HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGG-GTCCEEEESC-CCSHHHHHHH----HHTTC
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhcc-CCCeEEEeCC-CCCHHHHHHH----HHcCC
Confidence 57888999999999864 333333333222334555666666653 3356777767 5588888765 45799
Q ss_pred CEEEcCCCCC
Q psy965 204 DFIKTSGSIQ 213 (214)
Q Consensus 204 DFIKTSTGf~ 213 (214)
|+|--+|-|.
T Consensus 358 d~V~iGs~f~ 367 (496)
T 4fxs_A 358 SCVMVGSMFA 367 (496)
T ss_dssp SEEEESTTTT
T ss_pred CeEEecHHHh
Confidence 9998888764
No 112
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=77.90 E-value=7.9 Score=34.58 Aligned_cols=83 Identities=10% Similarity=-0.002 Sum_probs=54.1
Q ss_pred HHHHHHHHCCCCEEEEecChhHhh----cC---------------ChhHHHHHHHHHHHHhcC-CceEEEEEec---cC-
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVL----NN---------------QWPELFSEVKQMKEKCGE-KIHMKTILAV---GE- 184 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~----sg---------------~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt---~~- 184 (214)
.-++.|.+.|.|-|++=.--|+|+ |. +...+.+=+++|+++++. +..+|+=... +.
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 446778899999999977665544 11 233566777889999875 2333432211 10
Q ss_pred -CCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 185 -LKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 185 -L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
-.+.++....++.+.++|+|||--|.|
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~~~ 272 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFARES 272 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEECCC
Confidence 012355677888888999999998876
No 113
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=77.66 E-value=22 Score=30.38 Aligned_cols=86 Identities=14% Similarity=0.080 Sum_probs=56.8
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHH-HHHHHHHHHHhcCC-ceEEEEEeccCCCCHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPEL-FSEVKQMKEKCGEK-IHMKTILAVGELKTSENI 191 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v-~~Ei~~v~~a~~~~-~~lKvIlEt~~L~t~e~i 191 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=. .|..-.+ .+|-.++.+.+-+. .. ||.-+|..+| ++.
T Consensus 9 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-----TGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t-~~a 80 (288)
T 2nuw_A 9 TPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGT-----TGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNL-NDV 80 (288)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETST-----TTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCH-HHH
T ss_pred cCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcc-----ccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCH-HHH
Confidence 556 567777887778899999999988433222 2333222 23445555544320 11 9999999855 556
Q ss_pred HHHHHHHHHcCCCEEEc
Q psy965 192 YCASMTAMFAGSDFIKT 208 (214)
Q Consensus 192 ~~A~~ia~~aGaDFIKT 208 (214)
.+.++.|.++|+|.+=-
T Consensus 81 i~la~~A~~~Gadavlv 97 (288)
T 2nuw_A 81 MELVKFSNEMDILGVSS 97 (288)
T ss_dssp HHHHHHHHTSCCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE
Confidence 68888999999998743
No 114
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=77.34 E-value=10 Score=33.03 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=68.7
Q ss_pred CCeEEEecCC--CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 108 QPCLSQPAGF--PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 108 v~vatV~igF--P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
+-++.| +=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..
T Consensus 14 v~~a~v-TPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~g--rvpviaGvg~~ 90 (318)
T 3qfe_A 14 IWCPAV-TFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGP--DFPIMAGVGAH 90 (318)
T ss_dssp EEEECC-CCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCT--TSCEEEECCCS
T ss_pred eEEeee-CCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCC--CCcEEEeCCCC
Confidence 333444 667 5677778888888999999999986444444444333455555555666666654 57899999998
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 186 KTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
++ ++..+.++.|.++|+|.+=--+
T Consensus 91 ~t-~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 91 ST-RQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp SH-HHHHHHHHHHHHHTCSEEEECC
T ss_pred CH-HHHHHHHHHHHHcCCCEEEEeC
Confidence 55 5566888899999999875433
No 115
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=77.25 E-value=9.8 Score=30.12 Aligned_cols=73 Identities=15% Similarity=0.201 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 124 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 124 ~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
.+.=...++.+.+.|++-|.+-.... ...+-++.+++.+++..++ ..+...+.++. +.+.++|+
T Consensus 21 ~~~~~~~~~~~~~~G~~~iev~~~~~--------~~~~~i~~ir~~~~~~~~i----g~~~v~~~~~~----~~a~~~Ga 84 (205)
T 1wa3_A 21 VEEAKEKALAVFEGGVHLIEITFTVP--------DADTVIKELSFLKEKGAII----GAGTVTSVEQC----RKAVESGA 84 (205)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEETTST--------THHHHHHHTHHHHHTTCEE----EEESCCSHHHH----HHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCCh--------hHHHHHHHHHHHCCCCcEE----EecccCCHHHH----HHHHHcCC
Confidence 33334456777778999887755421 2234577777766531332 23322365653 45667999
Q ss_pred CEEEcCCCCC
Q psy965 204 DFIKTSGSIQ 213 (214)
Q Consensus 204 DFIKTSTGf~ 213 (214)
||| .+.||.
T Consensus 85 d~i-v~~~~~ 93 (205)
T 1wa3_A 85 EFI-VSPHLD 93 (205)
T ss_dssp SEE-ECSSCC
T ss_pred CEE-EcCCCC
Confidence 999 777764
No 116
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=77.25 E-value=7.8 Score=33.04 Aligned_cols=77 Identities=8% Similarity=-0.007 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc-
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA- 201 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a- 201 (214)
..+.=+..+++.++.|||-||+-... ..-.-.+|+..+.........+.+.|.|. ..+ + .+.|.++
T Consensus 23 ~~~~a~~~a~~~v~~GAdiIDIg~g~------~~v~~~ee~~rvv~~i~~~~~~pisIDT~---~~~-v---~~aAl~a~ 89 (262)
T 1f6y_A 23 DPAPVQEWARRQEEGGARALDLNVGP------AVQDKVSAMEWLVEVTQEVSNLTLCLDST---NIK-A---IEAGLKKC 89 (262)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEBCC----------CHHHHHHHHHHHHHTTCCSEEEEECS---CHH-H---HHHHHHHC
T ss_pred CHHHHHHHHHHHHHCCCcEEEECCCC------CCCChHHHHHHHHHHHHHhCCCeEEEeCC---CHH-H---HHHHHhhC
Confidence 34556678999999999999997621 12235667777776665412355677776 323 3 3344444
Q ss_pred -CCCEEEcCCCC
Q psy965 202 -GSDFIKTSGSI 212 (214)
Q Consensus 202 -GaDFIKTSTGf 212 (214)
|++.|.--+|+
T Consensus 90 ~Ga~iINdvs~~ 101 (262)
T 1f6y_A 90 KNRAMINSTNAE 101 (262)
T ss_dssp SSCEEEEEECSC
T ss_pred CCCCEEEECCCC
Confidence 99999866654
No 117
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=77.18 E-value=9.1 Score=34.13 Aligned_cols=78 Identities=12% Similarity=0.093 Sum_probs=50.4
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhH--------------------hh-----------------cCChhHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSL--------------------VL-----------------NNQWPELFSEVKQ 165 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~--------------------l~-----------------sg~~~~v~~Ei~~ 165 (214)
..+.-...++.|-+.|++-|++-++... +. ..+.....+.|+.
T Consensus 144 d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~d~~~~~~~i~~ 223 (368)
T 2nli_A 144 DDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGASKQKISPRDIEE 223 (368)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTBCSBCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhccCchhhHHHHHH
Confidence 3344455666777788888877776321 10 1133445677999
Q ss_pred HHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 166 MKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 166 v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+++..+.+..+|-+ + +.+. ++.+.++|+|+|.-|.
T Consensus 224 lr~~~~~PvivK~v-----~-~~e~----a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 224 IAGHSGLPVFVKGI-----Q-HPED----ADMAIKRGASGIWVSN 258 (368)
T ss_dssp HHHHSSSCEEEEEE-----C-SHHH----HHHHHHTTCSEEEECC
T ss_pred HHHHcCCCEEEEcC-----C-CHHH----HHHHHHcCCCEEEEcC
Confidence 99887655778854 3 5443 4677899999998864
No 118
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=77.01 E-value=19 Score=30.64 Aligned_cols=84 Identities=14% Similarity=0.107 Sum_probs=54.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ ||.-+|..+| ++..+.++.|.
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g-----vi~Gvg~~~t-~~ai~la~~A~ 87 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR-----VIVQVASLNA-DEAIALAKYAE 87 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS-----EEEECCCSSH-HHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC-----EEEeeCCCCH-HHHHHHHHHHH
Confidence 55556666678889999999885433333333332344444444555555442 9999999855 55668888999
Q ss_pred HcCCCEEEcC
Q psy965 200 FAGSDFIKTS 209 (214)
Q Consensus 200 ~aGaDFIKTS 209 (214)
++|+|.+=-.
T Consensus 88 ~~Gadavlv~ 97 (286)
T 2r91_A 88 SRGAEAVASL 97 (286)
T ss_dssp HTTCSEEEEC
T ss_pred hcCCCEEEEc
Confidence 9999987443
No 119
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=77.01 E-value=12 Score=30.46 Aligned_cols=88 Identities=8% Similarity=0.076 Sum_probs=57.4
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE-EeccC--
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE-- 184 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~~-- 184 (214)
.+.+++ ..+-++..+++..+ +.+.+.|.+-|++..+.+ ++ .+++++..+.. -|++. +-++.
T Consensus 10 ~~~~~~-~~~~f~~~~~~~~l---~~~~~~G~~~vEl~~~~~------~~--~~~~~~~l~~~----gl~~~~~~~~~~~ 73 (269)
T 3ngf_A 10 PRFAAN-LSTMFNEVPFLERF---RLAAEAGFGGVEFLFPYD------FD--ADVIARELKQH----NLTQVLFNMPPGD 73 (269)
T ss_dssp CEEEEE-TTTSCTTSCHHHHH---HHHHHTTCSEEECSCCTT------SC--HHHHHHHHHHT----TCEEEEEECCCSC
T ss_pred cceeee-chhhhccCCHHHHH---HHHHHcCCCEEEecCCcc------CC--HHHHHHHHHHc----CCcEEEEecCCCc
Confidence 356777 78999999988765 456668999999986431 11 34444444433 24554 23321
Q ss_pred CC---------------CHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 185 LK---------------TSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 185 L~---------------t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+. ..+.+.++.++|...|+++|...+|
T Consensus 74 ~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g 115 (269)
T 3ngf_A 74 WAAGERGMAAISGREQEFRDNVDIALHYALALDCRTLHAMSG 115 (269)
T ss_dssp TTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCCEEECCBC
T ss_pred cccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCCEEEEccC
Confidence 10 1245778889999999999998777
No 120
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=76.90 E-value=12 Score=33.10 Aligned_cols=70 Identities=14% Similarity=0.215 Sum_probs=45.2
Q ss_pred HHHHHHHHHC--CCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCE
Q psy965 128 LHEIELLAKQ--KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 128 ~~E~~~Ai~~--GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDF 205 (214)
...++..++. |++-+-+-.+. |+...+.+.|+.+++..++ +.+|+-+. + +.++ ++.+.++|+||
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~-----g~~~~~~~~i~~lr~~~~~---~~vi~g~v-~-t~e~----A~~a~~aGaD~ 185 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVAN-----GYSEHFVEFVKDVRKRFPQ---HTIMAGNV-V-TGEM----VEELILSGADI 185 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSC-----TTBHHHHHHHHHHHHHCTT---SEEEEEEE-C-SHHH----HHHHHHTTCSE
T ss_pred HHHHHHHHhccCCCCEEEEEecC-----CCcHHHHHHHHHHHHhcCC---CeEEEEeC-C-CHHH----HHHHHHhCCCE
Confidence 3456666776 88865433332 5666778889999987643 45554332 3 5443 45778999999
Q ss_pred EEcCCC
Q psy965 206 IKTSGS 211 (214)
Q Consensus 206 IKTSTG 211 (214)
|+.|-|
T Consensus 186 I~v~~g 191 (351)
T 2c6q_A 186 IKVGIG 191 (351)
T ss_dssp EEECSS
T ss_pred EEECCC
Confidence 988753
No 121
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=76.87 E-value=14 Score=30.06 Aligned_cols=68 Identities=9% Similarity=0.151 Sum_probs=44.1
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.++.+.+.||+.|-++. ......|+... +.++++++.++ +.+++.-+ +.+.+++ +.+.++|||.|--.
T Consensus 37 ~a~~~~~~Gad~i~v~~-~d~~~~~~~~~--~~i~~i~~~~~----ipv~v~gg-I~~~~~~----~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVD-LDAAFGTGDNR--ALIAEVAQAMD----IKVELSGG-IRDDDTL----AAALATGCTRVNLG 104 (244)
T ss_dssp HHHHHHHTTCSEEEEEE-HHHHHTSCCCH--HHHHHHHHHCS----SEEEEESS-CCSHHHH----HHHHHTTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEec-CchhhcCCChH--HHHHHHHHhcC----CcEEEECC-cCCHHHH----HHHHHcCCCEEEEC
Confidence 45777889999999874 43333455444 77888877553 45666555 4465654 45566899998543
No 122
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=76.86 E-value=11 Score=37.79 Aligned_cols=74 Identities=9% Similarity=0.064 Sum_probs=51.4
Q ss_pred HHHHHHHCCCCEEEEecCh---------hHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 130 EIELLAKQKVDEVDIVIQR---------SLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~---------~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
-++.+.+.|+|.|++=++- |..+..+.+.+.+-+++++++.+-+..+|+. +.+ +++...++.+.+
T Consensus 653 ~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~---~~~---~~~~~~a~~~~~ 726 (1025)
T 1gte_A 653 LSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT---PNV---TDIVSIARAAKE 726 (1025)
T ss_dssp HHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC---SCS---SCHHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC---CCh---HHHHHHHHHHHH
Confidence 3555667999999985442 2223357788888899999877544677773 334 235566788899
Q ss_pred cCCCEEEcC
Q psy965 201 AGSDFIKTS 209 (214)
Q Consensus 201 aGaDFIKTS 209 (214)
+|+|+|-.+
T Consensus 727 ~G~d~i~v~ 735 (1025)
T 1gte_A 727 GGADGVTAT 735 (1025)
T ss_dssp HTCSEEEEC
T ss_pred cCCCEEEEe
Confidence 999999874
No 123
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=76.18 E-value=14 Score=31.56 Aligned_cols=86 Identities=17% Similarity=0.076 Sum_probs=57.2
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.+++ .+.||.-+|..++ ++..+.++.|.++
T Consensus 20 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~g--rvpviaGvg~~~t-~~ai~la~~a~~~ 96 (292)
T 3daq_A 20 VNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDK--RVPVIAGTGTNDT-EKSIQASIQAKAL 96 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTT--SSCEEEECCCSCH-HHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCC--CCcEEEeCCcccH-HHHHHHHHHHHHc
Confidence 334555567888899999986333333333333344444455556666654 5889999999855 5566888999999
Q ss_pred CCCEEEcCC
Q psy965 202 GSDFIKTSG 210 (214)
Q Consensus 202 GaDFIKTST 210 (214)
|+|.+=-.+
T Consensus 97 Gadavlv~~ 105 (292)
T 3daq_A 97 GADAIMLIT 105 (292)
T ss_dssp TCSEEEEEC
T ss_pred CCCEEEECC
Confidence 999875433
No 124
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=75.46 E-value=16 Score=31.37 Aligned_cols=88 Identities=15% Similarity=0.043 Sum_probs=55.7
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=..++-.+=++.+++.++ . ||.-+|-.+| ++..+
T Consensus 9 TPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~--g---viaGvg~~~t-~~ai~ 82 (293)
T 1w3i_A 9 TPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN--K---IIFQVGGLNL-DDAIR 82 (293)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS--C---EEEECCCSCH-HHHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC--C---EEEecCCCCH-HHHHH
Confidence 556 567777777778899999999988433322222222223332222333333332 1 9999999855 55668
Q ss_pred HHHHHHHcCCCEEEc
Q psy965 194 ASMTAMFAGSDFIKT 208 (214)
Q Consensus 194 A~~ia~~aGaDFIKT 208 (214)
.++.|.++|+|.+=-
T Consensus 83 la~~A~~~Gadavlv 97 (293)
T 1w3i_A 83 LAKLSKDFDIVGIAS 97 (293)
T ss_dssp HHHHGGGSCCSEEEE
T ss_pred HHHHHHhcCCCEEEE
Confidence 888999999998743
No 125
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=75.43 E-value=35 Score=29.65 Aligned_cols=84 Identities=11% Similarity=0.082 Sum_probs=55.6
Q ss_pred CCCCeEEEecCCCCCC---CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEec
Q psy965 106 VYQPCLSQPAGFPSGQ---YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV 182 (214)
Q Consensus 106 s~v~vatV~igFP~G~---~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt 182 (214)
.++++... .|.|. ...+.....++.|.+.|||=|=.-.. + +.++++++.|+ +.|+++-
T Consensus 170 ~GlpvIie---~~~G~~~~~d~e~i~~aariA~elGAD~VKt~~t------~------e~~~~vv~~~~----vPVv~~G 230 (295)
T 3glc_A 170 VGMPTMAV---TGVGKDMVRDQRYFSLATRIAAEMGAQIIKTYYV------E------KGFERIVAGCP----VPIVIAG 230 (295)
T ss_dssp TTCCEEEE---ECC----CCSHHHHHHHHHHHHHTTCSEEEEECC------T------TTHHHHHHTCS----SCEEEEC
T ss_pred cCCEEEEE---CCCCCccCCCHHHHHHHHHHHHHhCCCEEEeCCC------H------HHHHHHHHhCC----CcEEEEE
Confidence 45665544 24442 23455567899999999996544321 1 23566776553 4677888
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 183 GELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 183 ~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
|.-.+.++..+..+-++++||+.+-.
T Consensus 231 G~~~~~~~~l~~v~~ai~aGA~Gv~v 256 (295)
T 3glc_A 231 GKKLPEREALEMCWQAIDQGASGVDM 256 (295)
T ss_dssp CSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 86656788888899999999998743
No 126
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=75.35 E-value=20 Score=31.16 Aligned_cols=108 Identities=8% Similarity=-0.003 Sum_probs=65.1
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEecChhHhhcC--------ChhHHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQY-LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN--------QWPELFSEV 163 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~-~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg--------~~~~v~~Ei 163 (214)
++..++..-+ +++.+ .+ ++.|+|+. ..+.-..-++..++.||.-|.+==..+-=+.| .-+...+-|
T Consensus 66 m~~~~~~I~~--~~~~P--vi-aD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I 140 (295)
T 1xg4_A 66 VLTDIRRITD--VCSLP--LL-VDADIGFGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRI 140 (295)
T ss_dssp HHHHHHHHHH--HCCSC--EE-EECTTCSSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHH
T ss_pred HHHHHHHHHh--hCCCC--EE-ecCCcccCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHH
Confidence 3344444333 45555 34 69999986 56666667888889999988753221100111 123556677
Q ss_pred HHHHHHhcCCceEEEEEeccCCC--CHHHHHHHHHHHHHcCCCEE
Q psy965 164 KQMKEKCGEKIHMKTILAVGELK--TSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 164 ~~v~~a~~~~~~lKvIlEt~~L~--t~e~i~~A~~ia~~aGaDFI 206 (214)
++.+++... ..++++-=|..+. ..++..+=++...+||||-|
T Consensus 141 ~Aa~~a~~~-~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i 184 (295)
T 1xg4_A 141 RAAVDAKTD-PDFVIMARTDALAVEGLDAAIERAQAYVEAGAEML 184 (295)
T ss_dssp HHHHHHCSS-TTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHhccC-CCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 888877643 3567776665441 12444455578889999977
No 127
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=75.08 E-value=17 Score=29.47 Aligned_cols=69 Identities=10% Similarity=0.160 Sum_probs=43.7
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
..++.+.+.||+.|-++ +......+.... +.++++++.++ +.+++.-+ +.+.+++ +.+.++|||+|--
T Consensus 35 ~~a~~~~~~Gad~i~v~-~~d~~~~~~~~~--~~i~~i~~~~~----ipv~v~gg-i~~~~~~----~~~l~~Gad~V~l 102 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLV-DLDAAFGRGSNH--ELLAEVVGKLD----VQVELSGG-IRDDESL----AAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHTTCSEEEEE-EHHHHTTSCCCH--HHHHHHHHHCS----SEEEEESS-CCSHHHH----HHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEE-cCcccccCCChH--HHHHHHHHhcC----CcEEEECC-CCCHHHH----HHHHHcCCCEEEE
Confidence 34567788899999987 443333444433 77888877653 45666555 4466654 4455689999854
Q ss_pred C
Q psy965 209 S 209 (214)
Q Consensus 209 S 209 (214)
.
T Consensus 103 g 103 (244)
T 2y88_A 103 G 103 (244)
T ss_dssp C
T ss_pred C
Confidence 3
No 128
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=75.06 E-value=21 Score=31.03 Aligned_cols=84 Identities=8% Similarity=0.058 Sum_probs=59.4
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
|..+.+.-..+++.+.+.|.+-+.+ +.|. ++.+...+=++++++++++. +.+.+....--+.++..+.++...
T Consensus 141 g~~~~~~~~~~a~~~~~~Gf~~iKi--k~g~---~~~~~~~e~v~avr~a~g~~--~~l~vDan~~~~~~~a~~~~~~l~ 213 (359)
T 1mdl_A 141 SLDGVKLATERAVTAAELGFRAVKT--RIGY---PALDQDLAVVRSIRQAVGDD--FGIMVDYNQSLDVPAAIKRSQALQ 213 (359)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEE--ECCC---SSHHHHHHHHHHHHHHHCSS--SEEEEECTTCSCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEE--ecCC---CCHHHHHHHHHHHHHHhCCC--CEEEEECCCCCCHHHHHHHHHHHH
Confidence 3345566678899999999999996 3321 35666777788999988752 445566543336777777777788
Q ss_pred HcCCCEEEcCC
Q psy965 200 FAGSDFIKTSG 210 (214)
Q Consensus 200 ~aGaDFIKTST 210 (214)
+.|.+||--+.
T Consensus 214 ~~~i~~iE~P~ 224 (359)
T 1mdl_A 214 QEGVTWIEEPT 224 (359)
T ss_dssp HHTCSCEECCS
T ss_pred HhCCCeEECCC
Confidence 89999997553
No 129
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=75.01 E-value=32 Score=29.48 Aligned_cols=93 Identities=11% Similarity=0.006 Sum_probs=61.1
Q ss_pred CCCC-CeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE---
Q psy965 105 LVYQ-PCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL--- 180 (214)
Q Consensus 105 gs~v-~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl--- 180 (214)
|.+. ++|.. +-+ .+.+.-..+++.+...|||-|++-+|+-.- ..+.+.+.+-+..+++..++ +.+|+
T Consensus 36 g~g~p~i~v~-l~~----~~~~e~~~~~~~~~~~gaD~VElRvD~l~~-~~~~~~v~~~l~~lr~~~~~---~PiI~T~R 106 (276)
T 3o1n_A 36 GEGAPKIIVS-LMG----KTITDVKSEALAYREADFDILEWRVDHFAN-VTTAESVLEAAGAIREIITD---KPLLFTFR 106 (276)
T ss_dssp TSSSCEEEEE-ECC----SSHHHHHHHHHHHTTSCCSEEEEEGGGCTT-TTCHHHHHHHHHHHHHHCCS---SCEEEECC
T ss_pred CCCCcEEEEE-eCC----CCHHHHHHHHHHHhhCCCCEEEEEeccccc-cCcHHHHHHHHHHHHHhcCC---CCEEEEEE
Confidence 4554 44444 433 346666778888888999999999997321 11236777778888877644 23343
Q ss_pred ---eccCCC-CHHHHHHHHHHHHHcC-CCEE
Q psy965 181 ---AVGELK-TSENIYCASMTAMFAG-SDFI 206 (214)
Q Consensus 181 ---Et~~L~-t~e~i~~A~~ia~~aG-aDFI 206 (214)
|-|... ++++-.+.-+.+++.| +|||
T Consensus 107 t~~eGG~~~~~~~~~~~ll~~~l~~g~~dyI 137 (276)
T 3o1n_A 107 SAKEGGEQALTTGQYIDLNRAAVDSGLVDMI 137 (276)
T ss_dssp BGGGTCSBCCCHHHHHHHHHHHHHHTCCSEE
T ss_pred EhhhCCCCCCCHHHHHHHHHHHHhcCCCCEE
Confidence 445442 4556667788888999 9998
No 130
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=75.00 E-value=17 Score=32.43 Aligned_cols=87 Identities=7% Similarity=-0.031 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhH-hhcC------ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSL-VLNN------QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~-l~sg------~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
..+.+.-+.+++.+++.|.+-+-+=+-... -..| +.+.-.+=++++++++|+ -+.+++....=-+.++-.+
T Consensus 149 ~~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~--d~~l~vDan~~~~~~~A~~ 226 (404)
T 4e5t_A 149 YNDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGT--KADLLFGTHGQFTVSGAKR 226 (404)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGG--GSEEEECCCSCBCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCC--CCeEEEeCCCCcCHHHHHH
Confidence 456788888999999999999887321100 0000 134455567888888875 3566666544337777778
Q ss_pred HHHHHHHcCCCEEEcC
Q psy965 194 ASMTAMFAGSDFIKTS 209 (214)
Q Consensus 194 A~~ia~~aGaDFIKTS 209 (214)
.++...+.|.+||--+
T Consensus 227 ~~~~l~~~~i~~iEeP 242 (404)
T 4e5t_A 227 LARRLEAYDPLWFEEP 242 (404)
T ss_dssp HHHHHGGGCCSEEECC
T ss_pred HHHHHhhcCCcEEECC
Confidence 8888888999999744
No 131
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=74.82 E-value=37 Score=30.03 Aligned_cols=95 Identities=13% Similarity=0.032 Sum_probs=64.0
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEec-ChhHhhcCCh-hHHHHHHHHHHHHhcCCceEEEEEecc
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVI-QRSLVLNNQW-PELFSEVKQMKEKCGEKIHMKTILAVG 183 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vi-n~~~l~sg~~-~~v~~Ei~~v~~a~~~~~~lKvIlEt~ 183 (214)
..+++-+. +++ | .+.+.-..+++.+.+.|.+-+.+=. ++| ++. +...+=++++++++++ -+.+.+...
T Consensus 132 ~~vp~~~~-~~~--~-~~~~~~~~~a~~~~~~Gf~~iKik~spvG----~~~~~~~~e~v~avr~a~G~--d~~l~vDan 201 (401)
T 2hzg_A 132 HGKRPYAS-LLF--G-DTPQETLERARAARRDGFAAVKFGWGPIG----RGTVAADADQIMAAREGLGP--DGDLMVDVG 201 (401)
T ss_dssp CCBEEEEE-EEC--C-SSHHHHHHHHHHHHHTTCSEEEEESTTTT----SSCHHHHHHHHHHHHHHHCS--SSEEEEECT
T ss_pred CceEeeEE-cCC--C-CCHHHHHHHHHHHHHhCCCeEEEcCCCCC----CCHHHHHHHHHHHHHHHhCC--CCeEEEECC
Confidence 35666544 343 2 3567677889999999999999731 022 355 6666778888998875 245666655
Q ss_pred CCC--CHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 184 ELK--TSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 184 ~L~--t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.-- +.++..+.++...+.|.+||--+.
T Consensus 202 ~~~~~~~~~a~~~~~~l~~~~i~~iEqP~ 230 (401)
T 2hzg_A 202 QIFGEDVEAAAARLPTLDAAGVLWLEEPF 230 (401)
T ss_dssp TTTTTCHHHHHTTHHHHHHTTCSEEECCS
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCEEECCC
Confidence 433 556766677777889999997543
No 132
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=74.63 E-value=6.7 Score=33.65 Aligned_cols=63 Identities=19% Similarity=0.228 Sum_probs=41.0
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++++|.+.|||-|=+-.. . ++ .+++..+.+.|+. .-+.+++|+. |.+++.+|. ++|+|+|.+.
T Consensus 127 qv~~A~~~GAD~VlLi~a--~-l~------~~~l~~l~~~a~~-lGl~~lvev~---t~ee~~~A~----~~Gad~IGv~ 189 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVA--A-LE------QSVLVSMLDRTES-LGMTALVEVH---TEQEADRAL----KAGAKVIGVN 189 (272)
T ss_dssp HHHHHHHTTCSEEEEEGG--G-SC------HHHHHHHHHHHHH-TTCEEEEEES---SHHHHHHHH----HHTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEecc--c-CC------HHHHHHHHHHHHH-CCCcEEEEcC---CHHHHHHHH----HCCCCEEEEC
Confidence 567788899988644222 1 11 2456666666654 3477889986 667776554 5699999875
No 133
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=74.52 E-value=23 Score=32.14 Aligned_cols=81 Identities=14% Similarity=0.134 Sum_probs=52.4
Q ss_pred HHHHHHHHCCCCEEEEecChhHhh--------------------cCChhHHHHHHHHHHHHh----cCCce--EEEEEec
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVL--------------------NNQWPELFSEVKQMKEKC----GEKIH--MKTILAV 182 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~--------------------sg~~~~v~~Ei~~v~~a~----~~~~~--lKvIlEt 182 (214)
.-|+.|.+.|.|-||+=.--|+|+ .++...+.+=+++|++++ +...+ +|+=.+.
T Consensus 174 ~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~ 253 (419)
T 3l5a_A 174 DATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEE 253 (419)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCE
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccccc
Confidence 346778899999999965544433 112244556667888877 32223 3432211
Q ss_pred ------cCCCCHHHHHHHHHHHHH-cCCCEEEcCCC
Q psy965 183 ------GELKTSENIYCASMTAMF-AGSDFIKTSGS 211 (214)
Q Consensus 183 ------~~L~t~e~i~~A~~ia~~-aGaDFIKTSTG 211 (214)
| + +.++....++...+ +|+|||--|.|
T Consensus 254 ~~~~~~G-~-~~ed~~~la~~L~~~~Gvd~I~vs~g 287 (419)
T 3l5a_A 254 TRGSDLG-Y-TIDEFNQLIDWVMDVSNIQYLAIASW 287 (419)
T ss_dssp EETTEEE-E-CHHHHHHHHHHHHHHSCCCCEEECCT
T ss_pred ccCCCCC-C-CHHHHHHHHHHHHhhcCCcEEEEeeC
Confidence 2 3 56777778888888 99999998875
No 134
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=74.24 E-value=9 Score=34.04 Aligned_cols=64 Identities=16% Similarity=0.169 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.|+++|++.|||-|-+ =| .+. ++++++++..++ .+++. -+|=+ |.++|.... +.|+|||.
T Consensus 241 ldea~eAl~aGaD~I~L-Dn------~~~----~~l~~av~~l~~--~v~ie-aSGGI-t~~~I~~~a----~tGVD~is 301 (320)
T 3paj_A 241 LAELEEAISAGADIIML-DN------FSL----EMMREAVKINAG--RAALE-NSGNI-TLDNLKECA----ETGVDYIS 301 (320)
T ss_dssp HHHHHHHHHTTCSEEEE-ES------CCH----HHHHHHHHHHTT--SSEEE-EESSC-CHHHHHHHH----TTTCSEEE
T ss_pred HHHHHHHHHcCCCEEEE-CC------CCH----HHHHHHHHHhCC--CCeEE-EECCC-CHHHHHHHH----HcCCCEEE
Confidence 36899999999875433 12 232 455555555543 34433 34558 778875433 58999998
Q ss_pred cCC
Q psy965 208 TSG 210 (214)
Q Consensus 208 TST 210 (214)
+++
T Consensus 302 vGa 304 (320)
T 3paj_A 302 VGA 304 (320)
T ss_dssp CTH
T ss_pred ECc
Confidence 764
No 135
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=74.04 E-value=38 Score=29.83 Aligned_cols=93 Identities=8% Similarity=-0.040 Sum_probs=61.9
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
.+++-+. +|+. ..+.+.-..+++.+++.|.+-+.+=+ |. ++.+...+=++++++++++ -+.+.+....--
T Consensus 132 ~vp~y~~-~~~~--~~~~~~~~~~a~~~~~~Gf~~vKik~--g~---~~~~~~~e~v~avR~a~G~--~~~l~vDan~~~ 201 (389)
T 2oz8_A 132 RVKAYAS-GLDF--HLDDDAFVSLFSHAASIGYSAFKIKV--GH---RDFDRDLRRLELLKTCVPA--GSKVMIDPNEAW 201 (389)
T ss_dssp EEEEEEE-CCBT--TCCHHHHHHHHHHHHHTTCCEEEEEC--CC---SSHHHHHHHHHHHHTTSCT--TCEEEEECTTCB
T ss_pred ceEEEEe-CCCc--CCCHHHHHHHHHHHHHhCCCEEEEcc--CC---CCHHHHHHHHHHHHHhhCC--CCeEEEECCCCC
Confidence 4555444 3442 23667778899999999999988533 21 3556666778888888865 255666654332
Q ss_pred CHHHHHHHHHHHHH--cCCCEEEcC
Q psy965 187 TSENIYCASMTAMF--AGSDFIKTS 209 (214)
Q Consensus 187 t~e~i~~A~~ia~~--aGaDFIKTS 209 (214)
+.++..+.++...+ .|.+||--.
T Consensus 202 ~~~~a~~~~~~l~~~g~~i~~iEqP 226 (389)
T 2oz8_A 202 TSKEALTKLVAIREAGHDLLWVEDP 226 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEESC
T ss_pred CHHHHHHHHHHHHhcCCCceEEeCC
Confidence 66777777777777 788888643
No 136
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=73.66 E-value=43 Score=30.29 Aligned_cols=100 Identities=4% Similarity=-0.055 Sum_probs=66.3
Q ss_pred CCCeEEEecCCCCCC-------CCHHHHHHHHHHHHHCCCCEEEEecChh-HhhcC------ChhHHHHHHHHHHHHhcC
Q psy965 107 YQPCLSQPAGFPSGQ-------YLLETRLHEIELLAKQKVDEVDIVIQRS-LVLNN------QWPELFSEVKQMKEKCGE 172 (214)
Q Consensus 107 ~v~vatV~igFP~G~-------~~~~~K~~E~~~Ai~~GAdEID~Vin~~-~l~sg------~~~~v~~Ei~~v~~a~~~ 172 (214)
.+++-+. .||.|. .+.+.-+.+++.+++.|.+-+-+=+... ..+.| +.+...+=++++++++|+
T Consensus 125 ~v~~y~~--~~~~~g~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~ 202 (433)
T 3rcy_A 125 RIRAYTY--LYPLPHHPITPFWTSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGD 202 (433)
T ss_dssp SEEEEEE--CCCCTTSCHHHHTTCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred eEEEEEE--EcccCCcccccCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCC
Confidence 4554444 477533 6788888999999999999988733211 00112 234455667888888875
Q ss_pred CceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 173 KIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 173 ~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
-+.+++....=-+.++..+.++...+.|.+||--+.
T Consensus 203 --d~~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP~ 238 (433)
T 3rcy_A 203 --KADLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPV 238 (433)
T ss_dssp --SSEEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCS
T ss_pred --CCeEEEeCCCCCCHHHHHHHHHHhhhcCCCEEECCC
Confidence 356667654333777777777778889999997543
No 137
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=73.38 E-value=22 Score=31.35 Aligned_cols=92 Identities=10% Similarity=0.003 Sum_probs=63.0
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
.+++-+. +|+ ..+.+.-..+++.+.+.|.+-+.+ +.|. .+.+. .+=++++++++++. +.+.+....--
T Consensus 152 ~vp~~~~-~g~---~~~~e~~~~~a~~~~~~Gf~~vKi--k~g~---~~~~~-~e~v~avr~a~g~d--~~l~vDan~~~ 219 (388)
T 2nql_A 152 SFPAYVS-GLP---ERTLKARGELAKYWQDRGFNAFKF--ATPV---ADDGP-AAEIANLRQVLGPQ--AKIAADMHWNQ 219 (388)
T ss_dssp EEEEEEE-CCC---CSSHHHHHHHHHHHHHTTCCEEEE--EGGG---CTTCH-HHHHHHHHHHHCTT--SEEEEECCSCS
T ss_pred ceEeeEE-eCC---CCCHHHHHHHHHHHHHhCCCEEEE--eCCC---CChHH-HHHHHHHHHHhCCC--CEEEEECCCCC
Confidence 4555444 332 236677778999999999999995 4442 35667 78889999998752 44555543322
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+.++..+.++...+.|.+||--+.
T Consensus 220 ~~~~a~~~~~~l~~~~i~~iEqP~ 243 (388)
T 2nql_A 220 TPERALELIAEMQPFDPWFAEAPV 243 (388)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECCS
T ss_pred CHHHHHHHHHHHhhcCCCEEECCC
Confidence 677777777777889999997543
No 138
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=73.20 E-value=41 Score=31.74 Aligned_cols=80 Identities=13% Similarity=0.050 Sum_probs=52.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC-CceEEEEE--eccCCCCHHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTIL--AVGELKTSENIYCASMTAM 199 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIl--Et~~L~t~e~i~~A~~ia~ 199 (214)
+-...-..++.+++.|+++|-+....+.+ +.+ ...++.+.. +..+.+.+ |.+.-.+.+...+.++.+.
T Consensus 115 pddv~~~~ve~a~~aGvd~vrIf~s~sd~-----~ni----~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~ 185 (539)
T 1rqb_A 115 NDEVVDRFVDKSAENGMDVFRVFDAMNDP-----RNM----AHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLL 185 (539)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEECCTTCCT-----HHH----HHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHhCCCCEEEEEEehhHH-----HHH----HHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 44556677889999999999988665444 333 333333321 23454445 6666657888889999999
Q ss_pred HcCCCEE--EcCCC
Q psy965 200 FAGSDFI--KTSGS 211 (214)
Q Consensus 200 ~aGaDFI--KTSTG 211 (214)
++|+|.| +-+.|
T Consensus 186 ~~Gad~I~L~DT~G 199 (539)
T 1rqb_A 186 DMGADSIALKDMAA 199 (539)
T ss_dssp HTTCSEEEEEETTC
T ss_pred HcCCCEEEeCCCCC
Confidence 9999975 33444
No 139
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=73.07 E-value=27 Score=30.43 Aligned_cols=83 Identities=11% Similarity=0.096 Sum_probs=61.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
.|..+.+.-+.+++.+++.|.+-+.+=+. .+.+.-.+=+++++++.++ .+++.+....--+.++..+.++..
T Consensus 136 ~~~~~~~~~~~~a~~~~~~G~~~~K~K~G------~~~~~d~~~v~avR~~~g~--~~~l~vDan~~~~~~~a~~~~~~l 207 (356)
T 3ro6_B 136 IGIKPVEETLAEAREHLALGFRVLKVKLC------GDEEQDFERLRRLHETLAG--RAVVRVDPNQSYDRDGLLRLDRLV 207 (356)
T ss_dssp ECSCCHHHHHHHHHHHHHTTCCEEEEECC------SCHHHHHHHHHHHHHHHTT--SSEEEEECTTCCCHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHHHcCCCEEEEEeC------CCHHHHHHHHHHHHHHhCC--CCEEEEeCCCCCCHHHHHHHHHHH
Confidence 35567888888999999999999887542 2555666677888888875 356777765444777777777788
Q ss_pred HHcCCCEEEcC
Q psy965 199 MFAGSDFIKTS 209 (214)
Q Consensus 199 ~~aGaDFIKTS 209 (214)
.+.|.+||--+
T Consensus 208 ~~~~i~~iEqP 218 (356)
T 3ro6_B 208 QELGIEFIEQP 218 (356)
T ss_dssp HHTTCCCEECC
T ss_pred HhcCCCEEECC
Confidence 88999999644
No 140
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=72.72 E-value=13 Score=32.24 Aligned_cols=81 Identities=9% Similarity=0.052 Sum_probs=50.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhcC---CceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGE---KIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~~---~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
..+.=+..+++.++.|||-||+=.--. .-| ..-...+|+..+...... ...+.+-+.|-.- ...+.|
T Consensus 36 ~~~~a~~~a~~~v~~GAdiIDIGgest--rPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~-------~va~aA 106 (282)
T 1aj0_A 36 SLIDAVKHANLMINAGATIIDVGGEST--RPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKP-------EVIRES 106 (282)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESSCC--STTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCH-------HHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC--CCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCH-------HHHHHH
Confidence 366777889999999999999976211 001 122345666555544421 0134566666522 335566
Q ss_pred HHcCCCEEEcCCCC
Q psy965 199 MFAGSDFIKTSGSI 212 (214)
Q Consensus 199 ~~aGaDFIKTSTGf 212 (214)
.++|+|.|.--||+
T Consensus 107 l~aGa~iINdvsg~ 120 (282)
T 1aj0_A 107 AKVGAHIINDIRSL 120 (282)
T ss_dssp HHTTCCEEEETTTT
T ss_pred HHcCCCEEEECCCC
Confidence 77799999987774
No 141
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=72.71 E-value=8.3 Score=33.53 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=58.1
Q ss_pred cCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igFP~-G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
.|.|. |..+.+.=+.-++.+.+.||++|=+.=-.|. .....+++=++.+++..++ +.|+.-.=+|...-..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~-----~~l~~H~Hnd~Gla~A 217 (307)
T 1ydo_A 146 FGCPYEKDVPIEQVIRLSEALFEFGISELSLGDTIGA---ANPAQVETVLEALLARFPA-----NQIALHFHDTRGTALA 217 (307)
T ss_dssp TCBTTTBCCCHHHHHHHHHHHHHHTCSCEEEECSSCC---CCHHHHHHHHHHHHTTSCG-----GGEEEECBGGGSCHHH
T ss_pred ecCCcCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCC---cCHHHHHHHHHHHHHhCCC-----CeEEEEECCCCchHHH
Confidence 45574 5566666666688888999999877644443 4677888888888865532 2344433222233334
Q ss_pred HHHHHHHcCCCEEEcCC
Q psy965 194 ASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 194 A~~ia~~aGaDFIKTST 210 (214)
-+..|+++|++.|-+|-
T Consensus 218 N~laAv~aGa~~vd~tv 234 (307)
T 1ydo_A 218 NMVTALQMGITVFDGSA 234 (307)
T ss_dssp HHHHHHHHTCCEEEEBG
T ss_pred HHHHHHHhCCCEEEEcc
Confidence 56788999999999874
No 142
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=72.62 E-value=31 Score=30.40 Aligned_cols=95 Identities=9% Similarity=-0.075 Sum_probs=61.8
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
.+++-+. .++.+...+.+.-..+++.+++.|.+-+.+=+ |. ++.+.-.+=++++++++++ -+++.+....--
T Consensus 150 ~v~~y~~-~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~--g~---~~~~~~~e~v~avr~a~g~--~~~l~vDan~~~ 221 (392)
T 1tzz_A 150 RVFVYAA-GGYYYPGKGLSMLRGEMRGYLDRGYNVVKMKI--GG---APIEEDRMRIEAVLEEIGK--DAQLAVDANGRF 221 (392)
T ss_dssp EEEEEEE-CCCC----CHHHHHHHHHHHHTTTCSEEEEEC--SS---SCHHHHHHHHHHHHHHHTT--TCEEEEECTTCC
T ss_pred CeeEEEe-CCcccCCCCHHHHHHHHHHHHHcCCCEEEEcC--CC---CCHHHHHHHHHHHHHhcCC--CCeEEEECCCCC
Confidence 4555444 33322123567777889999999999988532 21 3556666778888888875 255566654333
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+.++..+.++...+.|.+||--.
T Consensus 222 ~~~~a~~~~~~l~~~~i~~iEqP 244 (392)
T 1tzz_A 222 NLETGIAYAKMLRDYPLFWYEEV 244 (392)
T ss_dssp CHHHHHHHHHHHTTSCCSEEECC
T ss_pred CHHHHHHHHHHHHHcCCCeecCC
Confidence 67777777777778899998643
No 143
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=72.48 E-value=12 Score=33.59 Aligned_cols=80 Identities=15% Similarity=0.165 Sum_probs=48.1
Q ss_pred HHHHHHHHHCCCCEEEEecC-----hhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 128 LHEIELLAKQKVDEVDIVIQ-----RSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin-----~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
..+++.+.+.|||-|.+-+- .+....|--..-..-+..++++++. ..+.||-.-| +.+.+++.+ ++.+|
T Consensus 160 ~e~A~~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~-~~iPVIA~GG-I~~~~di~k----ala~G 233 (366)
T 4fo4_A 160 AEGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE-YGIPVIADGG-IRFSGDISK----AIAAG 233 (366)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGG-GTCCEEEESC-CCSHHHHHH----HHHTT
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCCCcccccCcccchHHHHHHHHHHHhh-cCCeEEEeCC-CCCHHHHHH----HHHcC
Confidence 35788899999999987211 1112222111223345555555543 3355666655 557777754 45679
Q ss_pred CCEEEcCCCCC
Q psy965 203 SDFIKTSGSIQ 213 (214)
Q Consensus 203 aDFIKTSTGf~ 213 (214)
||+|--+|.|.
T Consensus 234 Ad~V~vGs~f~ 244 (366)
T 4fo4_A 234 ASCVMVGSMFA 244 (366)
T ss_dssp CSEEEESTTTT
T ss_pred CCEEEEChHhh
Confidence 99999888764
No 144
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=72.33 E-value=35 Score=27.28 Aligned_cols=97 Identities=8% Similarity=-0.054 Sum_probs=60.0
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHH---HHHHHHHHHHCCCCEEEEecChhHhhcCChhHH-HHHHHHHH
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLET---RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPEL-FSEVKQMK 167 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~---K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v-~~Ei~~v~ 167 (214)
..+...++.++ ..++++.++-..||.+...-+. =..-++.|-+.||+-|=+. .+..-...|+.+ .+-++.+.
T Consensus 51 ~~~~~~~~~~~--~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~--~g~~~~~~~~~~~~~~l~~l~ 126 (272)
T 2q02_A 51 LNYNQVRNLAE--KYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARALVLC--PLNDGTIVPPEVTVEAIKRLS 126 (272)
T ss_dssp CCHHHHHHHHH--HTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEEEC--CCCSSBCCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHH--HcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEEEc--cCCCchhHHHHHHHHHHHHHH
Confidence 45667777777 4678887764446655433211 1234555667899875432 222122568888 88888888
Q ss_pred HHhcCCceEEEEEecc-----CCCCHHHHHH
Q psy965 168 EKCGEKIHMKTILAVG-----ELKTSENIYC 193 (214)
Q Consensus 168 ~a~~~~~~lKvIlEt~-----~L~t~e~i~~ 193 (214)
+.+.. .-+++-+|+- .+.+.++..+
T Consensus 127 ~~a~~-~gv~l~~E~~~~~~~~~~~~~~~~~ 156 (272)
T 2q02_A 127 DLFAR-YDIQGLVEPLGFRVSSLRSAVWAQQ 156 (272)
T ss_dssp HHHHT-TTCEEEECCCCSTTCSCCCHHHHHH
T ss_pred HHHHH-cCCEEEEEecCCCcccccCHHHHHH
Confidence 87765 4589999984 4445555443
No 145
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=72.24 E-value=10 Score=33.19 Aligned_cols=62 Identities=18% Similarity=0.195 Sum_probs=40.2
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.|+++|++.|||-|-+ =|.+ . ++++++++..++ .+++. -+|=+ |.+++.. -.+.|+|||.+
T Consensus 209 ~ea~eAl~aGaD~I~L-Dn~~--------~--~~l~~av~~~~~--~v~ie-aSGGI-t~~~i~~----~a~tGVD~Isv 269 (287)
T 3tqv_A 209 DELNQAIAAKADIVML-DNFS--------G--EDIDIAVSIARG--KVALE-VSGNI-DRNSIVA----IAKTGVDFISV 269 (287)
T ss_dssp HHHHHHHHTTCSEEEE-ESCC--------H--HHHHHHHHHHTT--TCEEE-EESSC-CTTTHHH----HHTTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEE-cCCC--------H--HHHHHHHHhhcC--CceEE-EECCC-CHHHHHH----HHHcCCCEEEE
Confidence 6999999999986544 1221 1 567777766554 23332 34557 7787754 34689999987
Q ss_pred C
Q psy965 209 S 209 (214)
Q Consensus 209 S 209 (214)
+
T Consensus 270 G 270 (287)
T 3tqv_A 270 G 270 (287)
T ss_dssp S
T ss_pred C
Confidence 5
No 146
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=72.05 E-value=23 Score=31.64 Aligned_cols=131 Identities=9% Similarity=0.008 Sum_probs=80.3
Q ss_pred CCCHHHHHHHHHHhhc-cCchhhhccccccCcccHH----HHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHH
Q psy965 61 DDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVW----HGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLA 135 (214)
Q Consensus 61 ~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~----~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai 135 (214)
..|.++-.++++.-.+ .+. ..-+.+|...+ ..++ +.+...++++++.. | + ....++.|+
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~-----~IE~g~p~~~~~d~e~v~~-i~~~~~~~~i~~l~---r-~------~~~di~~a~ 93 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVD-----IIEAGFAAASPGDFEAVNA-IAKTITKSTVCSLS---R-A------IERDIRQAG 93 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCS-----EEEEEEGGGCHHHHHHHHH-HHTTCSSSEEEEEE---E-S------SHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCC-----EEEEeCCCCCHHHHHHHHH-HHHhCCCCeEEEEe---c-C------CHHHHHHHH
Confidence 4677777776666443 222 01133444333 2222 22113456666652 1 1 134566666
Q ss_pred H----CCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcC-CceEEEEEeccCCCCHHHHHHHHHHHHHcCCCE
Q psy965 136 K----QKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 136 ~----~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDF 205 (214)
+ .|+++|.+++..+.+ +....+++.+.+..+++.+.. +..+-+=.|.+.-.+.+.+.+.++.+.++|+|-
T Consensus 94 ~al~~ag~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~ 173 (370)
T 3rmj_A 94 EAVAPAPKKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAGATT 173 (370)
T ss_dssp HHHTTSSSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCE
T ss_pred HHHhhCCCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCE
Confidence 6 899999999877654 345678888888888887765 233334455555557888999999999999997
Q ss_pred EE
Q psy965 206 IK 207 (214)
Q Consensus 206 IK 207 (214)
|-
T Consensus 174 i~ 175 (370)
T 3rmj_A 174 IN 175 (370)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 147
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=71.83 E-value=20 Score=31.65 Aligned_cols=93 Identities=10% Similarity=0.095 Sum_probs=62.9
Q ss_pred CCCeEEEecCCCCCCCCH---HHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc
Q psy965 107 YQPCLSQPAGFPSGQYLL---ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG 183 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~---~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~ 183 (214)
.+++-+. +|++. .+. +.-..+++.+++.|.+-+.+=+ |. ++.+...+=++++++++|+ -+.+.+...
T Consensus 123 ~vp~~~~-~g~~~--~~~~~~e~~~~~a~~~~~~Gf~~vKik~--g~---~~~~~d~e~v~avR~a~G~--d~~l~vDan 192 (382)
T 2gdq_A 123 EIPVYAS-FQSYS--DSPQWISRSVSNVEAQLKKGFEQIKVKI--GG---TSFKEDVRHINALQHTAGS--SITMILDAN 192 (382)
T ss_dssp EEEEEEE-CCCBC--SSTTHHHHHHHHHHHHHTTTCCEEEEEC--SS---SCHHHHHHHHHHHHHHHCT--TSEEEEECT
T ss_pred ceeEEEE-ecccC--CCcccHHHHHHHHHHHHHcCCCEEEEcC--CC---CCHHHHHHHHHHHHHhhCC--CCEEEEECC
Confidence 4565555 45544 233 6667889999999999988632 21 3566777778899999875 245556654
Q ss_pred CCCCHHHHHHHHHHHHHc-CCCEEEcC
Q psy965 184 ELKTSENIYCASMTAMFA-GSDFIKTS 209 (214)
Q Consensus 184 ~L~t~e~i~~A~~ia~~a-GaDFIKTS 209 (214)
.--+.++..+.++...+. |.+||--+
T Consensus 193 ~~~~~~~a~~~~~~l~~~~~i~~iEqP 219 (382)
T 2gdq_A 193 QSYDAAAAFKWERYFSEWTNIGWLEEP 219 (382)
T ss_dssp TCCCHHHHHTTHHHHTTCSCEEEEECC
T ss_pred CCCCHHHHHHHHHHHhhccCCeEEECC
Confidence 333667766777777778 99998654
No 148
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=71.70 E-value=26 Score=31.03 Aligned_cols=80 Identities=4% Similarity=0.031 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
+.+.-..+++.+++.|.+-+.+=+ | .++.+...+=++++++++++. +.+.+....--+.++..+.++...+.|
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~--g---~~~~~~~~e~v~avR~avg~d--~~l~vDan~~~~~~~a~~~~~~l~~~~ 234 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKV--G---QPDGALDIARVTAVRKHLGDA--VPLMVDANQQWDRPTAQRMCRIFEPFN 234 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEC--C---CSCHHHHHHHHHHHHHHHCTT--SCEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--C---CCCHHHHHHHHHHHHHHcCCC--CEEEEECCCCCCHHHHHHHHHHHHhhC
Confidence 567677899999999999988732 2 135666777788999988753 344555433227777777777778889
Q ss_pred CCEEEcC
Q psy965 203 SDFIKTS 209 (214)
Q Consensus 203 aDFIKTS 209 (214)
.+||--+
T Consensus 235 i~~iE~P 241 (393)
T 2og9_A 235 LVWIEEP 241 (393)
T ss_dssp CSCEECC
T ss_pred CCEEECC
Confidence 9999754
No 149
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=71.34 E-value=11 Score=33.49 Aligned_cols=79 Identities=11% Similarity=0.153 Sum_probs=46.7
Q ss_pred HHHHHHHHCCCCEEEEecChh-----HhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 129 HEIELLAKQKVDEVDIVIQRS-----LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~-----~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
.+++.+.+.|||-|.+-+..| ....|--..-..-+..+.++++. ..+.||-.-| +.+.+++.++ +.+||
T Consensus 157 e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~-~~iPVIA~GG-I~~~~di~ka----la~GA 230 (361)
T 3khj_A 157 EATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK-FGIPIIADGG-IRYSGDIGKA----LAVGA 230 (361)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHH-HTCCEEEESC-CCSHHHHHHH----HHHTC
T ss_pred HHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhh-cCCeEEEECC-CCCHHHHHHH----HHcCC
Confidence 578999999999998742222 22222101112334444444432 2355666655 5577887654 45699
Q ss_pred CEEEcCCCCC
Q psy965 204 DFIKTSGSIQ 213 (214)
Q Consensus 204 DFIKTSTGf~ 213 (214)
|+|-.+|.|.
T Consensus 231 d~V~vGs~~~ 240 (361)
T 3khj_A 231 SSVMIGSILA 240 (361)
T ss_dssp SEEEESTTTT
T ss_pred CEEEEChhhh
Confidence 9999988774
No 150
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=71.31 E-value=16 Score=32.61 Aligned_cols=82 Identities=9% Similarity=0.046 Sum_probs=51.9
Q ss_pred HHHHHHHH-HCCCCEEEEecChhHhh------------cCCh---------hHHHHHHHHHHHHhcCCceEEEEEec---
Q psy965 128 LHEIELLA-KQKVDEVDIVIQRSLVL------------NNQW---------PELFSEVKQMKEKCGEKIHMKTILAV--- 182 (214)
Q Consensus 128 ~~E~~~Ai-~~GAdEID~Vin~~~l~------------sg~~---------~~v~~Ei~~v~~a~~~~~~lKvIlEt--- 182 (214)
+.-++.|. +.|.|-|++=.--|+|+ ...| ..+.+=+++|+++++. .++-|=|-.
T Consensus 177 ~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~-~~v~vRis~~~~ 255 (379)
T 3aty_A 177 VEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGS-DRVGLRISPLNG 255 (379)
T ss_dssp HHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCG-GGEEEEECTTCC
T ss_pred HHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCC-CeEEEEECcccc
Confidence 45567888 89999999855444333 2222 2344556788888875 233222211
Q ss_pred -----cCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 183 -----GELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 183 -----~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+-. +.++....++.+.++|+|||--|.|
T Consensus 256 ~~~~~~~~-~~~~~~~la~~l~~~Gvd~i~v~~~ 288 (379)
T 3aty_A 256 VHGMIDSN-PEALTKHLCKKIEPLSLAYLHYLRG 288 (379)
T ss_dssp GGGCCCSC-HHHHHHHHHHHHGGGCCSEEEEECS
T ss_pred cccCCCCC-CHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 112 4566777888888999999998875
No 151
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=70.66 E-value=14 Score=31.39 Aligned_cols=102 Identities=9% Similarity=-0.062 Sum_probs=60.2
Q ss_pred HhhhcCCCCCC--eEEEecCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCce
Q psy965 99 DNLKTKLVYQP--CLSQPAGFPSG-QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIH 175 (214)
Q Consensus 99 ~~L~~~gs~v~--vatV~igFP~G-~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~ 175 (214)
+..++.|-.+. ++++ .|.|.+ ....+.=..-++.+.+.||+.|=+.=-.|. ...+.+++=++.+++..++ .+
T Consensus 127 ~~a~~~G~~V~~~l~~~-~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~---~~P~~~~~lv~~l~~~~~~-~~ 201 (295)
T 1ydn_A 127 GAAINDGLAIRGYVSCV-VECPYDGPVTPQAVASVTEQLFSLGCHEVSLGDTIGR---GTPDTVAAMLDAVLAIAPA-HS 201 (295)
T ss_dssp HHHHHTTCEEEEEEECS-SEETTTEECCHHHHHHHHHHHHHHTCSEEEEEETTSC---CCHHHHHHHHHHHHTTSCG-GG
T ss_pred HHHHHcCCeEEEEEEEE-ecCCcCCCCCHHHHHHHHHHHHhcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCCC-Ce
Confidence 33443344443 4444 455754 445555555577788899999877744443 5677888888888876542 23
Q ss_pred EEEEEe-ccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 176 MKTILA-VGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 176 lKvIlE-t~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+-+=.= +.-+ ...+ +..|+++|++.|-+|-
T Consensus 202 l~~H~Hn~~Gl-a~an----~l~Ai~aG~~~vd~sv 232 (295)
T 1ydn_A 202 LAGHYHDTGGR-ALDN----IRVSLEKGLRVFDASV 232 (295)
T ss_dssp EEEEEBCTTSC-HHHH----HHHHHHHTCCEEEEBT
T ss_pred EEEEECCCcch-HHHH----HHHHHHhCCCEEEecc
Confidence 322220 1113 2233 4567789999999874
No 152
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=70.28 E-value=51 Score=28.49 Aligned_cols=108 Identities=12% Similarity=0.015 Sum_probs=64.5
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEE---ecC--hhHhh--cCChhHHHHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDI---VIQ--RSLVL--NNQWPELFSEVKQ 165 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~---Vin--~~~l~--sg~~~~v~~Ei~~ 165 (214)
++..++..-+ +++++| + ++.|+|+...+.-..-++..++.||.-|=+ +.+ .|... --..++..+=|++
T Consensus 70 m~~~~~~I~r--~~~~Pv--i-aD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~a 144 (287)
T 3b8i_A 70 FVEQATRIGR--VARLPV--I-ADADHGYGNALNVMRTVVELERAGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRA 144 (287)
T ss_dssp HHHHHHHHHT--TCSSCE--E-EECTTCSSSHHHHHHHHHHHHHHTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHH
T ss_pred HHHHHHHHHh--cCCCCE--E-EECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHH
Confidence 3444444433 566663 4 699999877776677788888999987633 210 00000 1123466777888
Q ss_pred HHHHhcCCceEEEEEeccCC-CCHHHHHHHHHHHHHcCCCEE
Q psy965 166 MKEKCGEKIHMKTILAVGEL-KTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 166 v~~a~~~~~~lKvIlEt~~L-~t~e~i~~A~~ia~~aGaDFI 206 (214)
++++... ..++++==|... ...++..+=++...+||||-|
T Consensus 145 a~~a~~~-~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~i 185 (287)
T 3b8i_A 145 ALEARVD-PALTIIARTNAELIDVDAVIQRTLAYQEAGADGI 185 (287)
T ss_dssp HHHHCCS-TTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHcCCC-CCcEEEEechhhhcCHHHHHHHHHHHHHcCCCEE
Confidence 8877543 246666544432 123444444568889999976
No 153
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=70.23 E-value=15 Score=32.58 Aligned_cols=79 Identities=18% Similarity=0.112 Sum_probs=48.3
Q ss_pred HHHHHHHHHCCCCEEEEecChh-----HhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 128 LHEIELLAKQKVDEVDIVIQRS-----LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~-----~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
..+++.|++.|||-|++-.--| ....|--..-..=+..+.++++. ..+-||.+-|-- +..++.+ |+..|
T Consensus 172 ~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~-~~ipvIa~GGI~-~g~di~k----AlalG 245 (351)
T 2c6q_A 172 GEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHG-LKGHIISDGGCS-CPGDVAK----AFGAG 245 (351)
T ss_dssp HHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH-TTCEEEEESCCC-SHHHHHH----HHHTT
T ss_pred HHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhh-cCCcEEEeCCCC-CHHHHHH----HHHcC
Confidence 4689999999999998853222 11111000112223344444432 236788888855 7787764 45679
Q ss_pred CCEEEcCCCC
Q psy965 203 SDFIKTSGSI 212 (214)
Q Consensus 203 aDFIKTSTGf 212 (214)
||+|--+|-|
T Consensus 246 A~~V~vG~~f 255 (351)
T 2c6q_A 246 ADFVMLGGML 255 (351)
T ss_dssp CSEEEESTTT
T ss_pred CCceeccHHH
Confidence 9999887766
No 154
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=70.08 E-value=16 Score=30.67 Aligned_cols=80 Identities=18% Similarity=0.284 Sum_probs=52.6
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCC
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 187 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t 187 (214)
-++..|+ -|.. .+.=+.=++.+++.|.+-|.+..|-. .-.+-|+++++.+++ +++-.|-..|
T Consensus 13 ~~vi~Vi----r~~~-~~~a~~~a~al~~gGi~~iEvt~~t~--------~a~~~I~~l~~~~p~-----~~IGAGTVlt 74 (217)
T 3lab_A 13 KPLIPVI----VIDD-LVHAIPMAKALVAGGVHLLEVTLRTE--------AGLAAISAIKKAVPE-----AIVGAGTVCT 74 (217)
T ss_dssp CSEEEEE----CCSC-GGGHHHHHHHHHHTTCCEEEEETTST--------THHHHHHHHHHHCTT-----SEEEEECCCS
T ss_pred CCEEEEE----EcCC-HHHHHHHHHHHHHcCCCEEEEeCCCc--------cHHHHHHHHHHHCCC-----CeEeeccccC
Confidence 4566664 2332 23334457778889999999987743 234667777777754 2455565557
Q ss_pred HHHHHHHHHHHHHcCCCEEEcC
Q psy965 188 SENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 188 ~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.++. +.++++||+||-+.
T Consensus 75 ~~~a----~~ai~AGA~fivsP 92 (217)
T 3lab_A 75 ADDF----QKAIDAGAQFIVSP 92 (217)
T ss_dssp HHHH----HHHHHHTCSEEEES
T ss_pred HHHH----HHHHHcCCCEEEeC
Confidence 6654 56789999999865
No 155
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=70.08 E-value=31 Score=29.93 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=58.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
|..+.+.-..+++.+++.|.+-+.+=+ |. ++.+.-.+=++++++++++ -+.+.+....--+.++..+..+...
T Consensus 137 ~~~~~~~~~~~a~~~~~~Gf~~iKik~--g~---~~~~~d~~~v~avr~a~g~--~~~l~vDan~~~~~~~a~~~~~~l~ 209 (366)
T 1tkk_A 137 SVNSPEEMAADAENYLKQGFQTLKIKV--GK---DDIATDIARIQEIRKRVGS--AVKLRLDANQGWRPKEAVTAIRKME 209 (366)
T ss_dssp CSCCHHHHHHHHHHHHHHTCCEEEEEC--CS---SCHHHHHHHHHHHHHHHCS--SSEEEEECTTCSCHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCCeEEEEe--CC---CCHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHHHHHHHh
Confidence 334567677889999999999999733 21 3566677778889998875 2456666543336777777777777
Q ss_pred H--cCCCEEEcC
Q psy965 200 F--AGSDFIKTS 209 (214)
Q Consensus 200 ~--aGaDFIKTS 209 (214)
+ .|.+||--.
T Consensus 210 ~~~~~i~~iEqP 221 (366)
T 1tkk_A 210 DAGLGIELVEQP 221 (366)
T ss_dssp HTTCCEEEEECC
T ss_pred hcCCCceEEECC
Confidence 8 899998644
No 156
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=70.05 E-value=21 Score=31.55 Aligned_cols=85 Identities=15% Similarity=0.170 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCh---hHhhcCChhHHHHHHHHHHHHhc---CCceEEEEEeccCCCCHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQR---SLVLNNQWPELFSEVKQMKEKCG---EKIHMKTILAVGELKTSENIYCAS 195 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~---~~l~sg~~~~v~~Ei~~v~~a~~---~~~~lKvIlEt~~L~t~e~i~~A~ 195 (214)
...+.=+..+++.++.|||-||+=.-- |+--.++.=...+|++.+..... ....+-+-|.|- .. +..
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~---~~----~Va 118 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTS---RP----RVM 118 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECS---CH----HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCC---CH----HHH
Confidence 456777889999999999999987521 11101112334566655544332 101234455554 22 334
Q ss_pred HHHHHcCCCEEEcCCCCC
Q psy965 196 MTAMFAGSDFIKTSGSIQ 213 (214)
Q Consensus 196 ~ia~~aGaDFIKTSTGf~ 213 (214)
+.|.++|+|.|.-=+|+.
T Consensus 119 ~aAl~aGa~iINDVsg~~ 136 (314)
T 3tr9_A 119 REAVNTGADMINDQRALQ 136 (314)
T ss_dssp HHHHHHTCCEEEETTTTC
T ss_pred HHHHHcCCCEEEECCCCC
Confidence 556667999999877753
No 157
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=69.85 E-value=32 Score=30.19 Aligned_cols=80 Identities=9% Similarity=-0.048 Sum_probs=56.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
...+.-..+++.+.+.|.+-|.+ +.| ++.+...+=++++++++++ .. +.+....--+.++..+.++...+.
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKi--k~g----~~~~~~~e~v~avr~a~gd-~~--l~vD~n~~~~~~~a~~~~~~l~~~ 216 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYL--KVG----RGEKLDLEITAAVRGEIGD-AR--LRLDANEGWSVHDAINMCRKLEKY 216 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEE--ECC----SCHHHHHHHHHHHHTTSTT-CE--EEEECTTCCCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE--CcC----CCHHHHHHHHHHHHHHcCC-cE--EEEecCCCCCHHHHHHHHHHHHhc
Confidence 46677778999999999999996 332 2566666778888888873 43 455543222677777778888889
Q ss_pred CCCEEEcCC
Q psy965 202 GSDFIKTSG 210 (214)
Q Consensus 202 GaDFIKTST 210 (214)
|.+||--+.
T Consensus 217 ~i~~iEqP~ 225 (384)
T 2pgw_A 217 DIEFIEQPT 225 (384)
T ss_dssp CCSEEECCS
T ss_pred CCCEEeCCC
Confidence 999997543
No 158
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=69.84 E-value=13 Score=34.53 Aligned_cols=79 Identities=15% Similarity=0.124 Sum_probs=51.1
Q ss_pred HHHHHHHHCCCCEEEEec-----ChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 129 HEIELLAKQKVDEVDIVI-----QRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vi-----n~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
.+++.+++.|||-|.+-+ -.+....|--..-...+..++++++. ..+-||..-|- .+.+.+.+| +.+||
T Consensus 309 e~a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~-~~iPVIa~GGI-~~~~di~ka----la~GA 382 (511)
T 3usb_A 309 EATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARK-HGIPVIADGGI-KYSGDMVKA----LAAGA 382 (511)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT-TTCCEEEESCC-CSHHHHHHH----HHTTC
T ss_pred HHHHHHHHhCCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHh-CCCcEEEeCCC-CCHHHHHHH----HHhCc
Confidence 467889999999988622 22222333212333455666666654 34678888774 488888765 45799
Q ss_pred CEEEcCCCCC
Q psy965 204 DFIKTSGSIQ 213 (214)
Q Consensus 204 DFIKTSTGf~ 213 (214)
|.|--+|.|.
T Consensus 383 ~~V~vGs~~~ 392 (511)
T 3usb_A 383 HVVMLGSMFA 392 (511)
T ss_dssp SEEEESTTTT
T ss_pred hhheecHHHh
Confidence 9998887763
No 159
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=69.66 E-value=21 Score=29.98 Aligned_cols=92 Identities=17% Similarity=0.238 Sum_probs=55.5
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhc
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG 171 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~ 171 (214)
.+.....+.|. ..++..|+.+ .. .+.=+.-++.+++.|++-|.+-.+- .+. .+-|+++++.++
T Consensus 22 ~~m~~~~~~l~----~~~vv~Vir~----~~-~~~a~~~a~al~~gGi~~iEvt~~t-----~~a---~e~I~~l~~~~~ 84 (232)
T 4e38_A 22 SMMSTINNQLK----ALKVIPVIAI----DN-AEDIIPLGKVLAENGLPAAEITFRS-----DAA---VEAIRLLRQAQP 84 (232)
T ss_dssp CCHHHHHHHHH----HHCEEEEECC----SS-GGGHHHHHHHHHHTTCCEEEEETTS-----TTH---HHHHHHHHHHCT
T ss_pred HHHHHHHHHHH----hCCEEEEEEc----CC-HHHHHHHHHHHHHCCCCEEEEeCCC-----CCH---HHHHHHHHHhCC
Confidence 44444555565 2356666422 22 2334445778889999999997663 222 355666676665
Q ss_pred CCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 172 EKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 172 ~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+ + ++-.|-..+.++. +.|+++|||||-++
T Consensus 85 ~---~--~iGaGTVlt~~~a----~~Ai~AGA~fIvsP 113 (232)
T 4e38_A 85 E---M--LIGAGTILNGEQA----LAAKEAGATFVVSP 113 (232)
T ss_dssp T---C--EEEEECCCSHHHH----HHHHHHTCSEEECS
T ss_pred C---C--EEeECCcCCHHHH----HHHHHcCCCEEEeC
Confidence 3 2 3333434365554 57889999999865
No 160
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=69.62 E-value=12 Score=33.27 Aligned_cols=79 Identities=15% Similarity=0.143 Sum_probs=47.5
Q ss_pred HHHHHHHHHCCCCEEEEec-----ChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 128 LHEIELLAKQKVDEVDIVI-----QRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vi-----n~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
..+++.+.+.|||-|.+-. .....++|.-..-.+-+..+.++++. ..+.||..-| +.+.+++.++- .+|
T Consensus 205 ~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~-~~ipVia~GG-I~~~~d~~~al----a~G 278 (404)
T 1eep_A 205 KEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNN-TNICIIADGG-IRFSGDVVKAI----AAG 278 (404)
T ss_dssp HHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTT-SSCEEEEESC-CCSHHHHHHHH----HHT
T ss_pred HHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhh-cCceEEEECC-CCCHHHHHHHH----HcC
Confidence 3688999999999998821 11112222111112334455555543 3467777766 54778886543 469
Q ss_pred CCEEEcCCCC
Q psy965 203 SDFIKTSGSI 212 (214)
Q Consensus 203 aDFIKTSTGf 212 (214)
||+|.-.|+|
T Consensus 279 Ad~V~iG~~~ 288 (404)
T 1eep_A 279 ADSVMIGNLF 288 (404)
T ss_dssp CSEEEECHHH
T ss_pred CCHHhhCHHH
Confidence 9999887765
No 161
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=69.51 E-value=31 Score=29.35 Aligned_cols=92 Identities=10% Similarity=0.022 Sum_probs=62.5
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-----
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL----- 180 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl----- 180 (214)
..++|.+-+ |...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++ +-+||
T Consensus 68 gr~pviaGv-----g~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~ia~a~~----lPiilYn~P~ 136 (292)
T 2vc6_A 68 GRVPVIAGA-----GSNSTAEAIAFVRHAQNAGADGVLIVSPY-YNK-PTQEGIYQHFKAIDAAST----IPIIVYNIPG 136 (292)
T ss_dssp TSSCBEEEC-----CCSSHHHHHHHHHHHHHTTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHCS----SCEEEEECHH
T ss_pred CCCcEEEec-----CCccHHHHHHHHHHHHHcCCCEEEEcCCC-CCC-CCHHHHHHHHHHHHHhCC----CCEEEEeCcc
Confidence 356655442 56778888889999999999998555553 444 366888888889988774 33455
Q ss_pred eccCCCCHHHHHHHHHHHH-HcCCCEEEcCCC
Q psy965 181 AVGELKTSENIYCASMTAM-FAGSDFIKTSGS 211 (214)
Q Consensus 181 Et~~L~t~e~i~~A~~ia~-~aGaDFIKTSTG 211 (214)
=||.--+.+.+.+.+ . .-..-.||=|+|
T Consensus 137 ~tg~~l~~~~~~~La---~~~pnIvgiK~s~g 165 (292)
T 2vc6_A 137 RSAIEIHVETLARIF---EDCPNVKGVXDATG 165 (292)
T ss_dssp HHSCCCCHHHHHHHH---HHCTTEEEEEECSC
T ss_pred ccCcCCCHHHHHHHH---hhCCCEEEEecCCC
Confidence 255322667665554 3 356778888876
No 162
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=69.48 E-value=18 Score=31.15 Aligned_cols=95 Identities=15% Similarity=0.038 Sum_probs=60.9
Q ss_pred CCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecC----------hhHhhcCChhHHHHHHHHHHHHhcCCc
Q psy965 105 LVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQ----------RSLVLNNQWPELFSEVKQMKEKCGEKI 174 (214)
Q Consensus 105 gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin----------~~~l~sg~~~~v~~Ei~~v~~a~~~~~ 174 (214)
..+.++..- ++ |.. .+.=..-++.+.+. +|.||+=.. +|.-+..+.+.+.+-+++++++++-+.
T Consensus 56 ~~~~~~~~Q-L~---g~~-~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv 129 (318)
T 1vhn_A 56 PHERNVAVQ-IF---GSE-PNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKF 129 (318)
T ss_dssp TTCTTEEEE-EE---CSC-HHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEE
T ss_pred cCCCeEEEE-eC---CCC-HHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCE
Confidence 345566666 34 544 34444456667777 999998531 244455678888888999999886434
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 175 HMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 175 ~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.+|+=. |.. ..+.. ..++.+.++|+|+|--+
T Consensus 130 ~vKir~--G~~-~~~~~-~~a~~l~~~G~d~i~v~ 160 (318)
T 1vhn_A 130 SVKTRL--GWE-KNEVE-EIYRILVEEGVDEVFIH 160 (318)
T ss_dssp EEEEES--CSS-SCCHH-HHHHHHHHTTCCEEEEE
T ss_pred EEEecC--CCC-hHHHH-HHHHHHHHhCCCEEEEc
Confidence 555543 433 22323 66778889999999654
No 163
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=69.37 E-value=60 Score=28.68 Aligned_cols=99 Identities=7% Similarity=-0.001 Sum_probs=67.0
Q ss_pred HhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHC-CCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEE
Q psy965 99 DNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMK 177 (214)
Q Consensus 99 ~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~-GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lK 177 (214)
+.|......+++-+. +|+ .+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++++++.|+ -+.
T Consensus 148 ~LLGg~~~~v~~y~s-~g~----~~~e~~~~~a~~~~~~~G~~~~KlKvG~-----~~~~~d~~~v~avR~a~G~--~~~ 215 (383)
T 3toy_A 148 ELLGGSARPIPAYDS-YGV----LDARDDERTLRTACDEHGFRAIKSKGGH-----GDLATDEAMIKGLRALLGP--DIA 215 (383)
T ss_dssp HHTTCCCCCEEEEEE-CSS----CCHHHHHHHHHHHHHTSCCCEEEEECCS-----SCHHHHHHHHHHHHHHHCT--TSE
T ss_pred HHhCCCCCceEEeEe-cCC----CCHHHHHHHHHHHHHccCCcEEEEecCC-----CCHHHHHHHHHHHHHHhCC--CCe
Confidence 355522234555544 444 6778888899999999 99988764321 2445556667888888875 356
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 178 TILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 178 vIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+++....--+.++-.+.++...+.|.+||--+
T Consensus 216 l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP 247 (383)
T 3toy_A 216 LMLDFNQSLDPAEATRRIARLADYDLTWIEEP 247 (383)
T ss_dssp EEEECTTCSCHHHHHHHHHHHGGGCCSEEECC
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhhCCCEEECC
Confidence 67776544477777777777788899999654
No 164
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=69.16 E-value=20 Score=31.20 Aligned_cols=67 Identities=9% Similarity=0.157 Sum_probs=40.5
Q ss_pred HCCCCEEEEecChhH-hh--cCC--hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 136 KQKVDEVDIVIQRSL-VL--NNQ--WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 136 ~~GAdEID~Vin~~~-l~--sg~--~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
..|+|-|++-++... +. .|+ ++.+.+.++++++..+-+..+|.+ +.-.+.+. ++.+.++|+|+|-.|
T Consensus 138 ~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~---~~~~~~~~----a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 138 MIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEV---GFGMSKAS----AGKLYEAGAAAVDIG 209 (349)
T ss_dssp HTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEE---SSCCCHHH----HHHHHHHTCSEEEEE
T ss_pred hcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEec---CCCCCHHH----HHHHHHcCCCEEEEc
Confidence 469998877665321 11 122 223667788888876544677764 33225443 457778999999886
No 165
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=68.95 E-value=15 Score=31.06 Aligned_cols=107 Identities=7% Similarity=-0.088 Sum_probs=61.7
Q ss_pred ccHHHHHHhhhcCCCCCC---eEEEecCCCCCCCC----HHH-------HHHHHHHHHHCCCCEEEEecC---hhHh---
Q psy965 92 STVWHGSDNLKTKLVYQP---CLSQPAGFPSGQYL----LET-------RLHEIELLAKQKVDEVDIVIQ---RSLV--- 151 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~---vatV~igFP~G~~~----~~~-------K~~E~~~Ai~~GAdEID~Vin---~~~l--- 151 (214)
..+...++.|+ ..+++ +.++ ++||.+... .+. =...++.|.+.|++-| +..- .+.+
T Consensus 65 ~~~~~l~~~l~--~~gL~~~~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v-~~~~~~~~g~~~~~ 140 (335)
T 2qw5_A 65 ENYTNLRHYLD--SEGLENVKISTN-VGATRTFDPSSNYPEQRQEALEYLKSRVDITAALGGEIM-MGPIVIPYGVFPTT 140 (335)
T ss_dssp HHHHHHHHHHH--HTTCTTCEEEEE-CCCCSSSCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEE-EECCSSCTTCCCBC
T ss_pred HHHHHHHHHHH--HCCCCcceeEEE-eccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE-eccccCccccccCC
Confidence 44566677777 46788 8887 688754322 121 1234566777899988 4321 2222
Q ss_pred --------------hcCChhHHHHHHHHHHHHhcCCceEEEEEecc------CCCCHHHHHHHHHHHHHcCCCEE
Q psy965 152 --------------LNNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 152 --------------~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~------~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
....|+.+.+-++.+.+.+.. .-+++-+|+- .+.+.+++ .++....|.+.+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~t~~~~---~~ll~~v~~~~v 211 (335)
T 2qw5_A 141 DFNEPIWSDELQEHLKVRYANAQPILDKLGEYAEI-KKVKLAIEPITHWETPGPNKLSQL---IEFLKGVKSKQV 211 (335)
T ss_dssp TTCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTCEEEECCCCTTTCSSCCSHHHH---HHHHTTCCCTTE
T ss_pred cccccccccchhhhHHHHHHHHHHHHHHHHHHHHH-cCCEEEEeeCCcccccccCCHHHH---HHHHHhcCCCCe
Confidence 222355666666777666654 4589999983 34455554 344444555444
No 166
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=68.57 E-value=34 Score=30.33 Aligned_cols=80 Identities=9% Similarity=0.125 Sum_probs=56.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
+.+.-..+++.+++.|.+-+.+= .| .++.+...+=++++++++++. +.+.+....--+.++..+.++...+.|
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik--~g---~~~~~~d~e~v~avR~avG~d--~~l~vDan~~~~~~~ai~~~~~l~~~~ 247 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLK--VG---QPNCAEDIRRLTAVREALGDE--FPLMVDANQQWDRETAIRMGRKMEQFN 247 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEE--CC---CSCHHHHHHHHHHHHHHHCSS--SCEEEECTTCSCHHHHHHHHHHHGGGT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEe--cC---CCCHHHHHHHHHHHHHHcCCC--CeEEEECCCCCCHHHHHHHHHHHHHcC
Confidence 56667789999999999998873 22 135666677788899988752 344555433226777777777778889
Q ss_pred CCEEEcC
Q psy965 203 SDFIKTS 209 (214)
Q Consensus 203 aDFIKTS 209 (214)
.+||--+
T Consensus 248 i~~iEqP 254 (398)
T 2pp0_A 248 LIWIEEP 254 (398)
T ss_dssp CSCEECC
T ss_pred CceeeCC
Confidence 9998754
No 167
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=68.49 E-value=4.9 Score=35.37 Aligned_cols=87 Identities=14% Similarity=0.098 Sum_probs=58.3
Q ss_pred CCCC-CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHH
Q psy965 116 GFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 194 (214)
Q Consensus 116 gFP~-G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A 194 (214)
.||. |..+.+-=+.-++.+.+.||++|=+.=-.|.. ....+++=++.+++..++ +.|+.-.=+|...-..-
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~p~-----~~i~~H~Hnd~GlA~AN 230 (337)
T 3ble_A 159 DWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVL---SPEETFQGVDSLIQKYPD-----IHFEFHGHNDYDLSVAN 230 (337)
T ss_dssp THHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTTCCC---CHHHHHHHHHHHHHHCTT-----SCEEEECBCTTSCHHHH
T ss_pred ECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCCCCc---CHHHHHHHHHHHHHhcCC-----CeEEEEecCCcchHHHH
Confidence 4553 44455655666788889999998776444543 577888888888877643 23454433343444455
Q ss_pred HHHHHHcCCCEEEcCC
Q psy965 195 SMTAMFAGSDFIKTSG 210 (214)
Q Consensus 195 ~~ia~~aGaDFIKTST 210 (214)
+..|+++|++.|-+|-
T Consensus 231 ~laAv~aGa~~vd~tv 246 (337)
T 3ble_A 231 SLQAIRAGVKGLHASI 246 (337)
T ss_dssp HHHHHHTTCSEEEEBG
T ss_pred HHHHHHhCCCEEEEec
Confidence 6788999999999874
No 168
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=68.35 E-value=62 Score=29.02 Aligned_cols=106 Identities=10% Similarity=-0.081 Sum_probs=68.2
Q ss_pred HhhhcC-CCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhcCCceE
Q psy965 99 DNLKTK-LVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEKIHM 176 (214)
Q Consensus 99 ~~L~~~-gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~~~~~l 176 (214)
++|... ...+++-+. +|.. .+.+.-+.+++.+++.|.+-+.+=+..+....| +.+.-.+=++++++++|+ -+
T Consensus 158 ~LLGG~~r~~v~~y~s--~~~~--~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~--d~ 231 (412)
T 3stp_A 158 KLLGGRTKDRIPVYYS--KLYA--GSIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGY--DN 231 (412)
T ss_dssp HHHTCCSSSSEEEEEE--CCCS--CCHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCS--SS
T ss_pred HhcCCCCCceEEEEEE--ecCC--CCHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCC--CC
Confidence 456421 134554443 3443 367888889999999999998876544321111 234455567888888875 35
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 177 KTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 177 KvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.+++....=-+.++-.+.++...+.|.+||--+.
T Consensus 232 ~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEeP~ 265 (412)
T 3stp_A 232 DLMLECYMGWNLDYAKRMLPKLAPYEPRWLEEPV 265 (412)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCS
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC
Confidence 6667755433778877888888889999996543
No 169
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=68.30 E-value=41 Score=29.78 Aligned_cols=94 Identities=11% Similarity=-0.001 Sum_probs=64.7
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE-EeccCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~~L 185 (214)
.+++... +||..-..+.+.-+.+++.+++.|.+-+.+=+.. +.+.-.+=+++++++.++ -+.++ +....-
T Consensus 127 ~v~~y~t-~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~------~~~~d~~~v~avR~a~g~--~~~l~~vDan~~ 197 (391)
T 3gd6_A 127 KIKVCYP-IFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK------NLDADEEFLSRVKEEFGS--RVRIKSYDFSHL 197 (391)
T ss_dssp EEEBCEE-ECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS------CHHHHHHHHHHHHHHHGG--GCEEEEEECTTC
T ss_pred eEEeeEE-ecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC------CHHHHHHHHHHHHHHcCC--CCcEEEecCCCC
Confidence 4565555 4532224456777889999999999998875432 455556667888888875 34566 776443
Q ss_pred CCHHHHHHHHHHHHHcCC--CEEEcC
Q psy965 186 KTSENIYCASMTAMFAGS--DFIKTS 209 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGa--DFIKTS 209 (214)
-+.++-.+.++...+.|. +||--.
T Consensus 198 ~~~~~A~~~~~~l~~~~i~~~~iEqP 223 (391)
T 3gd6_A 198 LNWKDAHRAIKRLTKYDLGLEMIESP 223 (391)
T ss_dssp SCHHHHHHHHHHHTTCCSSCCEEECC
T ss_pred cCHHHHHHHHHHHHhcCCCcceecCC
Confidence 377887788888888899 998644
No 170
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=68.08 E-value=35 Score=29.80 Aligned_cols=87 Identities=11% Similarity=0.041 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhh-cCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVL-NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~-sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
..+.+.-..+++.+++.|.+-+.+=+..+..- ..+.+...+=++++++++++ -+.+.+....--+.++..+.++...
T Consensus 147 ~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~--d~~l~vDan~~~~~~~a~~~~~~l~ 224 (382)
T 1rvk_A 147 LATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGP--DIRLMIDAFHWYSRTDALALGRGLE 224 (382)
T ss_dssp TSSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCT--TSEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 45677778899999999999998643221100 00456666778888888875 2456666543336777777788888
Q ss_pred HcCCCEEEcC
Q psy965 200 FAGSDFIKTS 209 (214)
Q Consensus 200 ~aGaDFIKTS 209 (214)
+.|.+||--+
T Consensus 225 ~~~i~~iE~P 234 (382)
T 1rvk_A 225 KLGFDWIEEP 234 (382)
T ss_dssp TTTCSEEECC
T ss_pred hcCCCEEeCC
Confidence 8999999654
No 171
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=67.91 E-value=33 Score=28.96 Aligned_cols=96 Identities=10% Similarity=0.050 Sum_probs=61.8
Q ss_pred CCCC-CeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhc-CChhHHHHHHHHHHHHhcC-Cc--eEEEE
Q psy965 105 LVYQ-PCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN-NQWPELFSEVKQMKEKCGE-KI--HMKTI 179 (214)
Q Consensus 105 gs~v-~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s-g~~~~v~~Ei~~v~~a~~~-~~--~lKvI 179 (214)
|.+. +||+.+ -..+.+.-+.|++.+...|||-|++=+|+ +.+ .+.+.+.+-+..+++..++ +. .++--
T Consensus 16 g~g~PkIcvpl-----~~~t~~e~l~~a~~~~~~~aD~vElR~D~--l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~ 88 (258)
T 4h3d_A 16 GEGRPKICVPI-----IGKNKKDIIKEAKELKDACLDIIEWRVDF--FENVENIKEVKEVLYELRSYIHDIPLLFTFRSV 88 (258)
T ss_dssp TSSSCEEEEEE-----CCSSHHHHHHHHHHHTTSSCSEEEEEGGG--CTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCG
T ss_pred CCCCCEEEEEe-----CCCCHHHHHHHHHHHhhcCCCEEEEeecc--ccccCCHHHHHHHHHHHHHhcCCCCEEEEEech
Confidence 4444 455553 33567777889999999999999988885 332 2567888888888887654 21 23333
Q ss_pred EeccCCC-CHHHHHHHHHHHHHcC-CCEEE
Q psy965 180 LAVGELK-TSENIYCASMTAMFAG-SDFIK 207 (214)
Q Consensus 180 lEt~~L~-t~e~i~~A~~ia~~aG-aDFIK 207 (214)
-|-|... ++++-...-+.+.+.| +|||-
T Consensus 89 ~EGG~~~~~~~~~~~ll~~~~~~~~~d~iD 118 (258)
T 4h3d_A 89 VEGGEKLISRDYYTTLNKEISNTGLVDLID 118 (258)
T ss_dssp GGTCSCCCCHHHHHHHHHHHHHTTCCSEEE
T ss_pred hhCCCCCCCHHHHHHHHHHHHhcCCchhhH
Confidence 4666543 3444444555566665 89973
No 172
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=67.80 E-value=7.6 Score=32.81 Aligned_cols=58 Identities=12% Similarity=0.112 Sum_probs=37.0
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
..+++.|++.||+=| +- +..+ .|+ .++|.. .-+.+|-- .. |.+|+.+| .++|+||||
T Consensus 96 ~~~a~~Ai~AGA~fI---vs------P~~~---~~v---i~~~~~-~gi~~ipG--v~-TptEi~~A----~~~Gad~vK 152 (232)
T 4e38_A 96 GEQALAAKEAGATFV---VS------PGFN---PNT---VRACQE-IGIDIVPG--VN-NPSTVEAA----LEMGLTTLK 152 (232)
T ss_dssp HHHHHHHHHHTCSEE---EC------SSCC---HHH---HHHHHH-HTCEEECE--EC-SHHHHHHH----HHTTCCEEE
T ss_pred HHHHHHHHHcCCCEE---Ee------CCCC---HHH---HHHHHH-cCCCEEcC--CC-CHHHHHHH----HHcCCCEEE
Confidence 779999999999765 22 2221 222 233332 23556654 33 78888755 789999999
Q ss_pred c
Q psy965 208 T 208 (214)
Q Consensus 208 T 208 (214)
.
T Consensus 153 ~ 153 (232)
T 4e38_A 153 F 153 (232)
T ss_dssp E
T ss_pred E
Confidence 6
No 173
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=67.42 E-value=16 Score=34.59 Aligned_cols=81 Identities=20% Similarity=0.182 Sum_probs=54.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
+.+-=+.-++.+.+.||++|=+.=-.|. .....+++-++.+++..++ .+.|+.-.=+|...-...+..|++||
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G~---~~P~~v~~lv~~l~~~~p~----~i~I~~H~Hnd~GlAvAN~laAveAG 245 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAAL---LKPQPAYDIIKAIKDTYGQ----KTQINLHCHSTTGVTEVSLMKAIEAG 245 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTCC---CCHHHHHHHHHHHHHHHCT----TCCEEEEEBCTTSCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCC---cCHHHHHHHHHHHHHhcCC----CceEEEEeCCCCChHHHHHHHHHHhC
Confidence 4555566678888999998755533443 3477888888888887752 12344433334344445677899999
Q ss_pred CCEEEcCC
Q psy965 203 SDFIKTSG 210 (214)
Q Consensus 203 aDFIKTST 210 (214)
+|.|-+|-
T Consensus 246 a~~VD~ti 253 (539)
T 1rqb_A 246 VDVVDTAI 253 (539)
T ss_dssp CSEEEEBC
T ss_pred CCEEEEec
Confidence 99999874
No 174
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=67.35 E-value=14 Score=33.57 Aligned_cols=80 Identities=11% Similarity=0.140 Sum_probs=49.9
Q ss_pred HHHHHHHHHCCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
..+++.+.+.|||-|-+-+--|.. ..|....-..-+..++++++. ..+.||-.-| +.+.+++.+| +.+|
T Consensus 195 ~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~-~~IPVIA~GG-I~~~~di~ka----lalG 268 (400)
T 3ffs_A 195 EEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK-FGIPIIADGG-IRYSGDIGKA----LAVG 268 (400)
T ss_dssp HHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTT-TTCCEEEESC-CCSHHHHHHH----HTTT
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHh-cCCCEEecCC-CCCHHHHHHH----HHcC
Confidence 468899999999998872211111 111111223556666666654 3466777777 4477888654 4679
Q ss_pred CCEEEcCCCCC
Q psy965 203 SDFIKTSGSIQ 213 (214)
Q Consensus 203 aDFIKTSTGf~ 213 (214)
||.|.-.|.|.
T Consensus 269 Ad~V~vGt~f~ 279 (400)
T 3ffs_A 269 ASSVMIGSILA 279 (400)
T ss_dssp CSEEEECGGGT
T ss_pred CCEEEEChHHh
Confidence 99999988774
No 175
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=67.15 E-value=29 Score=29.46 Aligned_cols=105 Identities=9% Similarity=-0.041 Sum_probs=63.5
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCC----hhHHHHHHHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQ----WPELFSEVKQMKE 168 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~----~~~v~~Ei~~v~~ 168 (214)
++..++..-+ +.+++ .+ +++|+|+.... ..-++..++.||.-|=+= + +.-..|. .++..+=|+++++
T Consensus 68 m~~~~~~I~r--~~~~p--vi-aD~~~Gyg~~~--~~~~~~l~~aGa~gv~iE-d-~~~~~~k~l~~~~e~~~~I~a~~~ 138 (255)
T 2qiw_A 68 YMAVVKKITS--AVSIP--VS-VDVESGYGLSP--ADLIAQILEAGAVGINVE-D-VVHSEGKRVREAQEHADYIAAARQ 138 (255)
T ss_dssp HHHHHHHHHH--HCSSC--EE-EECTTCTTCCH--HHHHHHHHHTTCCEEEEC-S-EEGGGTTEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh--cCCCC--EE-eccCCCcCcHH--HHHHHHHHHcCCcEEEEC-C-CCCCCCCcccCHHHHHHHHHHHHH
Confidence 3444444333 44544 34 69999976544 777888889999876321 0 0011122 2577788888888
Q ss_pred HhcC-CceEEEEEeccCC--C------CHHHHHHHHHHHHHcCCCEE
Q psy965 169 KCGE-KIHMKTILAVGEL--K------TSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 169 a~~~-~~~lKvIlEt~~L--~------t~e~i~~A~~ia~~aGaDFI 206 (214)
+... +.+++|+==|..+ + ..++..+=++...+||||-|
T Consensus 139 a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i 185 (255)
T 2qiw_A 139 AADVAGVDVVINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSV 185 (255)
T ss_dssp HHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHhcCCCeEEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEE
Confidence 7542 2577887766642 0 13455455567788999976
No 176
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=66.84 E-value=28 Score=28.37 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=54.3
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc---
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG--- 183 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~--- 183 (214)
..+++.. ...|.+ ++. -++.+.+.|.+-|++....... ++ .+++.++++++.. .-|++..=+.
T Consensus 10 ~~~lg~~-t~~~~~---l~~---~l~~~~~~G~~~vEl~~~~~~~----~~--~~~~~~~~~~l~~-~gl~~~~~~~~~~ 75 (290)
T 3tva_A 10 YWPIGVF-TSVDAG---LGV---HLEVAQDLKVPTVQVHAPHPHT----RT--REHAQAFRAKCDA-AGIQVTVIFGGFD 75 (290)
T ss_dssp CSCEEEE-EESSSS---SSB---CHHHHHHTTCSEEEEECCCGGG----CS--HHHHHHHHHHHHH-TTCEEEEEECCCT
T ss_pred ceeEEEE-ecCCCC---HHH---HHHHHHHcCCCEEEecCCCCCc----CC--HHHHHHHHHHHHH-cCCEEEEEeeccC
Confidence 3555555 344332 222 4566777999999999754322 11 3445555555543 2244332211
Q ss_pred ---CC---------C--C-------HHHHHHHHHHHHHcCCCEEEcCCCCC
Q psy965 184 ---EL---------K--T-------SENIYCASMTAMFAGSDFIKTSGSIQ 213 (214)
Q Consensus 184 ---~L---------~--t-------~e~i~~A~~ia~~aGaDFIKTSTGf~ 213 (214)
+. + + .+.+.++.++|...|+++|.+.+|+.
T Consensus 76 g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~ 126 (290)
T 3tva_A 76 GESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIGLHIGFV 126 (290)
T ss_dssp TCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEEECCCCC
T ss_pred CcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 11 0 1 24567888999999999999988863
No 177
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=66.84 E-value=58 Score=28.25 Aligned_cols=81 Identities=5% Similarity=0.046 Sum_probs=58.0
Q ss_pred CCHHHHHHHHHHHHH-CCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 122 YLLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~-~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
.+.+.-..+++.+++ .|.+-+.+=+ | .++.+...+=++++++++++ -+.+.+....--+.++..+.++...+
T Consensus 141 ~~~e~~~~~a~~~~~~~Gf~~iKik~--g---~~~~~~~~e~v~avr~a~g~--~~~l~vDan~~~~~~~a~~~~~~l~~ 213 (370)
T 1nu5_A 141 GDTARDIDSALEMIETRRHNRFKVKL--G---ARTPAQDLEHIRSIVKAVGD--RASVRVDVNQGWDEQTASIWIPRLEE 213 (370)
T ss_dssp SCHHHHHHHHHHHHHTTSCSEEEEEC--S---SSCHHHHHHHHHHHHHHHGG--GCEEEEECTTCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCccEEEEec--C---CCChHHHHHHHHHHHHhcCC--CCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 356777788999999 9999998632 2 12455666778888888875 24566765433377777777888888
Q ss_pred cCCCEEEcC
Q psy965 201 AGSDFIKTS 209 (214)
Q Consensus 201 aGaDFIKTS 209 (214)
.|.+||--.
T Consensus 214 ~~i~~iEqP 222 (370)
T 1nu5_A 214 AGVELVEQP 222 (370)
T ss_dssp HTCCEEECC
T ss_pred cCcceEeCC
Confidence 899999744
No 178
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=66.76 E-value=16 Score=32.28 Aligned_cols=81 Identities=10% Similarity=0.004 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHh---cCCc-eEEEEEeccCCCCHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKC---GEKI-HMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~---~~~~-~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
..+.=+..+++.++.|||-||+=---. .-|..-...+|+..+.... .... .+-+-|.|-.- +..+.|
T Consensus 63 ~~~~a~~~A~~~v~~GAdIIDIGgeST--rPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT~~~-------~VaeaA 133 (318)
T 2vp8_A 63 SDAAARDAVHRAVADGADVIDVGGVKA--GPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDTWRA-------QVAKAA 133 (318)
T ss_dssp -CHHHHHHHHHHHHTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHSTTCEEEEECSCH-------HHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC--CCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeCCCH-------HHHHHH
Confidence 356677889999999999999864211 1121223456665553222 2101 24455666522 334556
Q ss_pred HHcCCCEEEcCCCC
Q psy965 199 MFAGSDFIKTSGSI 212 (214)
Q Consensus 199 ~~aGaDFIKTSTGf 212 (214)
.++|+|.|.-=+|+
T Consensus 134 l~aGa~iINDVsg~ 147 (318)
T 2vp8_A 134 CAAGADLINDTWGG 147 (318)
T ss_dssp HHHTCCEEEETTSS
T ss_pred HHhCCCEEEECCCC
Confidence 66799999877775
No 179
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=66.70 E-value=45 Score=26.73 Aligned_cols=108 Identities=12% Similarity=-0.009 Sum_probs=61.5
Q ss_pred cccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHH--------HHHHHHHHHCCCCEEEEecChhH--hhcCChhHHH
Q psy965 91 VSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETR--------LHEIELLAKQKVDEVDIVIQRSL--VLNNQWPELF 160 (214)
Q Consensus 91 P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K--------~~E~~~Ai~~GAdEID~Vin~~~--l~sg~~~~v~ 160 (214)
+..+...++.++ ..++++.++ ++|.+....+.. ...++.|-+.|+.-|=+.+-.+. -....|+.+.
T Consensus 46 ~~~~~~~~~~l~--~~gl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~ 121 (281)
T 3u0h_A 46 RHGDAAVEAMFQ--RRGLVLANL--GLPLNLYDSEPVFLRELSLLPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLA 121 (281)
T ss_dssp HHCHHHHHHHHH--TTTCEECCE--ECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHH
T ss_pred ccCHHHHHHHHH--HcCCceEEe--cccccccCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHH
Confidence 345667777777 567877655 455433322211 12456778899997643221110 0112456677
Q ss_pred HHHHHHHHHhcCCceEEEEEecc-----------CCCCHHHHHHHHHHHHHcCCCEE
Q psy965 161 SEVKQMKEKCGEKIHMKTILAVG-----------ELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 161 ~Ei~~v~~a~~~~~~lKvIlEt~-----------~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
+-+..+.+.+.. .-+++-+|+- .+.+.++.. ++.-..|.+.+
T Consensus 122 ~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~---~l~~~v~~~~v 174 (281)
T 3u0h_A 122 RRIRQVAVELLP-LGMRVGLEYVGPHHLRHRRYPFVQSLADLK---TFWEAIGAPNV 174 (281)
T ss_dssp HHHHHHHHHHGG-GTCEEEEECCCCGGGCCSSEECCCSHHHHH---HHHHHHCCTTE
T ss_pred HHHHHHHHHHHH-cCCEEEEEeccccccccccccccCCHHHHH---HHHHHcCCCCe
Confidence 777777777765 5689999975 355655554 34444454433
No 180
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=66.26 E-value=28 Score=32.97 Aligned_cols=81 Identities=12% Similarity=0.046 Sum_probs=53.8
Q ss_pred HHHHHHHHHCCCCEEEEecChhH-h----hc-----------C----ChhHHHHHHHHHHHHhcCCceEEEEE------e
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSL-V----LN-----------N----QWPELFSEVKQMKEKCGEKIHMKTIL------A 181 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~-l----~s-----------g----~~~~v~~Ei~~v~~a~~~~~~lKvIl------E 181 (214)
..-++.|.+.|.|-||+=.--|+ | +| | +...+.+=+++|+++++...++.+=| +
T Consensus 159 ~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~ 238 (690)
T 3k30_A 159 RNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEID 238 (690)
T ss_dssp HHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCST
T ss_pred HHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCC
Confidence 45577888899999999554444 2 21 2 22366677788999998545666655 3
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
.| + +.++....++.+.+ |+|+|-.|.|
T Consensus 239 ~g-~-~~~~~~~~~~~l~~-~~d~~~v~~~ 265 (690)
T 3k30_A 239 GG-I-TREDIEGVLRELGE-LPDLWDFAMG 265 (690)
T ss_dssp TS-C-CHHHHHHHHHHHTT-SSSEEEEECS
T ss_pred CC-C-CHHHHHHHHHHHHh-hcCEEEEecc
Confidence 33 3 45666667776666 8999987765
No 181
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=65.99 E-value=51 Score=26.62 Aligned_cols=136 Identities=7% Similarity=-0.079 Sum_probs=74.2
Q ss_pred cCCCCCCCHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCC--------C--C--
Q psy965 56 TTLSGDDTEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQ--------Y--L-- 123 (214)
Q Consensus 56 TlL~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~--------~--~-- 123 (214)
|.+=++.+.++.-+.+.++- |... .....++..++..++.++ ..++++.++ .+|.+. + +
T Consensus 17 ~~~f~~~~~~~~l~~~~~~G--~~~v---El~~~~~~~~~~~~~~l~--~~gl~~~~~--~~~~~~~~~~~~~~~~~~~~ 87 (269)
T 3ngf_A 17 STMFNEVPFLERFRLAAEAG--FGGV---EFLFPYDFDADVIARELK--QHNLTQVLF--NMPPGDWAAGERGMAAISGR 87 (269)
T ss_dssp TTSCTTSCHHHHHHHHHHTT--CSEE---ECSCCTTSCHHHHHHHHH--HTTCEEEEE--ECCCSCTTTTCCBCTTCTTC
T ss_pred hhhhccCCHHHHHHHHHHcC--CCEE---EecCCccCCHHHHHHHHH--HcCCcEEEE--ecCCCccccCCCCcCCCccH
Confidence 33344555555555544442 3210 001123455777777887 478888776 444331 1 1
Q ss_pred H----HHHHHHHHHHHHCCCCEEEEecChhHhhcC-----ChhHHHHHHHHHHHHhcCCceEEEEEec--------cCCC
Q psy965 124 L----ETRLHEIELLAKQKVDEVDIVIQRSLVLNN-----QWPELFSEVKQMKEKCGEKIHMKTILAV--------GELK 186 (214)
Q Consensus 124 ~----~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-----~~~~v~~Ei~~v~~a~~~~~~lKvIlEt--------~~L~ 186 (214)
. +.=..-++.|-+.|++-| |+..| .-.+ .|+.+.+-++++.+.+.. .-+++-+|+ ..+.
T Consensus 88 r~~~~~~~~~~i~~A~~lGa~~v--~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~n~~~~~~~~~~ 163 (269)
T 3ngf_A 88 EQEFRDNVDIALHYALALDCRTL--HAMSG-ITEGLDRKACEETFIENFRYAADKLAP-HGITVLVEPLNTRNMPGYFIV 163 (269)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEE--ECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGG-GTCEEEECCCCTTTSTTBSCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEE--EEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEeeCCcccCccchhc
Confidence 1 111234566777899875 55444 2222 356677777777777765 568999996 2455
Q ss_pred CHHHHHHHHHHHHHcCCCEEE
Q psy965 187 TSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.++. .++.-..|.+.++
T Consensus 164 ~~~~~---~~l~~~v~~~~vg 181 (269)
T 3ngf_A 164 HQLEA---VGLVKRVNRPNVA 181 (269)
T ss_dssp CHHHH---HHHHHHHCCTTEE
T ss_pred CHHHH---HHHHHHhCCCCCC
Confidence 65544 4444455555443
No 182
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=65.97 E-value=17 Score=32.25 Aligned_cols=76 Identities=12% Similarity=0.151 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHh----------------------hc----------C-----------ChhHHHH
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLV----------------------LN----------N-----------QWPELFS 161 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l----------------------~s----------g-----------~~~~v~~ 161 (214)
+.-...++.+.+.|++-|++-+|.... .. | +.....+
T Consensus 136 ~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~~~~ 215 (370)
T 1gox_A 136 NVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSYVAGQIDRSLSWK 215 (370)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHHHHHTBCTTCCHH
T ss_pred hHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHHHHhhcCccchHH
Confidence 333556777788899999888874211 11 0 1122346
Q ss_pred HHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 162 EVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 162 Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+|+.+++..+.+..+|.+ + +.++ ++.+.++|+|+|+-|.
T Consensus 216 ~i~~l~~~~~~pv~vK~~-----~-~~e~----a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 216 DVAWLQTITSLPILVKGV-----I-TAED----ARLAVQHGAAGIIVSN 254 (370)
T ss_dssp HHHHHHHHCCSCEEEECC-----C-SHHH----HHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhCCCEEEEec-----C-CHHH----HHHHHHcCCCEEEECC
Confidence 788888876543555654 3 5444 3577899999999865
No 183
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=65.96 E-value=21 Score=30.23 Aligned_cols=74 Identities=15% Similarity=0.154 Sum_probs=50.2
Q ss_pred CHHHHHHHHHHHHHCC-CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC---CCHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQK-VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL---KTSENIYCASMTA 198 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~G-AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L---~t~e~i~~A~~ia 198 (214)
+-+.++.-.+.+++.| ++-||+=++.+ + .+..+.+..+. ...|||+-.-.. .+.+++.....-+
T Consensus 98 ~~~~~~~ll~~~~~~g~~d~iDvEl~~~-----~------~~~~l~~~~~~-~~~kvI~S~Hdf~~tP~~~el~~~~~~~ 165 (257)
T 2yr1_A 98 NEAEVRRLIEAICRSGAIDLVDYELAYG-----E------RIADVRRMTEE-CSVWLVVSRHYFDGTPRKETLLADMRQA 165 (257)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEEGGGT-----T------HHHHHHHHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCEEEEECCCC-----h------hHHHHHHHHHh-CCCEEEEEecCCCCCcCHHHHHHHHHHH
Confidence 4567777788999999 99999866442 1 22333443332 347999976432 2457777777778
Q ss_pred HHcCCCEEEc
Q psy965 199 MFAGSDFIKT 208 (214)
Q Consensus 199 ~~aGaDFIKT 208 (214)
...|||.+|=
T Consensus 166 ~~~gaDivKi 175 (257)
T 2yr1_A 166 ERYGADIAKV 175 (257)
T ss_dssp HHTTCSEEEE
T ss_pred HhcCCCEEEE
Confidence 8899999994
No 184
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=65.68 E-value=53 Score=28.02 Aligned_cols=12 Identities=25% Similarity=0.022 Sum_probs=6.2
Q ss_pred HHHHHHHcCCCE
Q psy965 194 ASMTAMFAGSDF 205 (214)
Q Consensus 194 A~~ia~~aGaDF 205 (214)
-++.|.++|+|-
T Consensus 117 f~~~~~~aGvdG 128 (271)
T 3nav_A 117 FYQRCQKAGVDS 128 (271)
T ss_dssp HHHHHHHHTCCE
T ss_pred HHHHHHHCCCCE
Confidence 345555555554
No 185
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=65.56 E-value=41 Score=29.77 Aligned_cols=85 Identities=8% Similarity=0.067 Sum_probs=57.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEec--ChhHhhc---C------ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVI--QRSLVLN---N------QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENI 191 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vi--n~~~l~s---g------~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i 191 (214)
+.+.-..+++.+++.|.+-+.+-+ ..|...+ | +.+...+=++++++++++ -+.+.+....--+.++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v~avRea~G~--d~~l~vDan~~~~~~~a 226 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARVAAVREAVGP--EVEVAIDMHGRFDIPSS 226 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHHHHHHHHHCS--SSEEEEECTTCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHHHHHHHhcCC--CCEEEEECCCCCCHHHH
Confidence 456667889999999999999876 2232111 1 224445567788888875 24556665433377777
Q ss_pred HHHHHHHHHcCCCEEEcC
Q psy965 192 YCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 192 ~~A~~ia~~aGaDFIKTS 209 (214)
.+.++...+.|.+||--+
T Consensus 227 ~~~~~~l~~~~i~~iEeP 244 (410)
T 2qq6_A 227 IRFARAMEPFGLLWLEEP 244 (410)
T ss_dssp HHHHHHHGGGCCSEEECC
T ss_pred HHHHHHHhhcCCCeEECC
Confidence 777777778899998744
No 186
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=64.87 E-value=16 Score=31.12 Aligned_cols=119 Identities=14% Similarity=0.185 Sum_probs=71.2
Q ss_pred CCCCCCHHHHHHHHHHhhccCchhhhc-cccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHH
Q psy965 58 LSGDDTEAVVETLTLKAIQPLSEELKE-KVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAK 136 (214)
Q Consensus 58 L~~~~T~~~I~~lc~eA~~~f~~~~~~-~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~ 136 (214)
+.++..+.++-+.++++...++-. .+ .+-...+.++..+++. .++||-.= + ++..+. ++.+|..
T Consensus 57 i~~~~~~~~iA~~y~~~A~~IsVl-Td~~~F~gs~~dL~~ir~~-----v~lPvLrK--D--fi~~~~-----qi~ea~~ 121 (251)
T 1i4n_A 57 INADASLEDFIRMYDELADAISIL-TEKHYFKGDPAFVRAARNL-----TCRPILAK--D--FYIDTV-----QVKLASS 121 (251)
T ss_dssp SCTTCCHHHHHHHHHHHCSEEEEE-CCCSSSCCCTHHHHHHHTT-----CCSCEEEE--C--CCCSTH-----HHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCceEEE-ecccccCCCHHHHHHHHHh-----CCCCEEEe--e--CCCCHH-----HHHHHHH
Confidence 455667788877777762111100 00 0001355667666642 45666544 4 343333 5667899
Q ss_pred CCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc-CCCEEEc
Q psy965 137 QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA-GSDFIKT 208 (214)
Q Consensus 137 ~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a-GaDFIKT 208 (214)
.|||-|= ++...+.. +++..+.+.++. .-+.+++|+. |.++.. .|.++ |+|+|=+
T Consensus 122 ~GAD~il--Li~a~l~~-------~~l~~l~~~a~~-lGl~~lvEv~---~~eE~~----~A~~l~g~~iIGi 177 (251)
T 1i4n_A 122 VGADAIL--IIARILTA-------EQIKEIYEAAEE-LGMDSLVEVH---SREDLE----KVFSVIRPKIIGI 177 (251)
T ss_dssp TTCSEEE--EEGGGSCH-------HHHHHHHHHHHT-TTCEEEEEEC---SHHHHH----HHHTTCCCSEEEE
T ss_pred cCCCEEE--EecccCCH-------HHHHHHHHHHHH-cCCeEEEEeC---CHHHHH----HHHhcCCCCEEEE
Confidence 9999853 44443221 567777777776 5699999998 557754 45577 9999844
No 187
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=64.83 E-value=59 Score=27.83 Aligned_cols=107 Identities=13% Similarity=0.033 Sum_probs=65.7
Q ss_pred HHHHHHhhhcCCCCCCeEEEecCCCCCCC-CHHHHHHHHHHHHHCCCCEEEE---ecChhHhhcCChhHHHHHHHHHHHH
Q psy965 94 VWHGSDNLKTKLVYQPCLSQPAGFPSGQY-LLETRLHEIELLAKQKVDEVDI---VIQRSLVLNNQWPELFSEVKQMKEK 169 (214)
Q Consensus 94 V~~a~~~L~~~gs~v~vatV~igFP~G~~-~~~~K~~E~~~Ai~~GAdEID~---Vin~~~l~sg~~~~v~~Ei~~v~~a 169 (214)
+..++..-+ +++++ .+ ++.|+|+. ..+.-..-++..++.||.-|=+ +.+-+.-+ -..++..+=|++++++
T Consensus 65 ~~~~~~I~~--~~~~p--vi-aD~d~Gyg~~~~~~~~~v~~l~~aGaagv~iED~~~~~~k~l-~~~~e~~~~I~aa~~a 138 (275)
T 2ze3_A 65 GREVEAIVR--AVAIP--VN-ADIEAGYGHAPEDVRRTVEHFAALGVAGVNLEDATGLTPTEL-YDLDSQLRRIEAARAA 138 (275)
T ss_dssp HHHHHHHHH--HCSSC--EE-EECTTCSSSSHHHHHHHHHHHHHTTCSEEEEECBCSSSSSCB-CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh--hcCCC--EE-eecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCcCCCCCcc-CCHHHHHHHHHHHHHh
Confidence 344444333 45554 33 69999986 5666667788888999987632 22111000 1235677778888887
Q ss_pred hcC-CceEEEEEeccCCCC---------HHHHHHHHHHHHHcCCCEE
Q psy965 170 CGE-KIHMKTILAVGELKT---------SENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 170 ~~~-~~~lKvIlEt~~L~t---------~e~i~~A~~ia~~aGaDFI 206 (214)
... +.+++++==|..+.. .++..+=++...+||||-|
T Consensus 139 ~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd~i 185 (275)
T 2ze3_A 139 IDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGADGI 185 (275)
T ss_dssp HHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCCEE
Confidence 641 257888887766421 2444444567788999976
No 188
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=64.13 E-value=32 Score=28.79 Aligned_cols=96 Identities=14% Similarity=0.096 Sum_probs=59.7
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHh----hcCChh---HHHHHHHHHHHH---hcCCceE
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV----LNNQWP---ELFSEVKQMKEK---CGEKIHM 176 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l----~sg~~~---~v~~Ei~~v~~a---~~~~~~l 176 (214)
.+|+.-= .++| +.+.+..-++.|.+.|||=|=-- -|+- .+++++ .-.++++.|++. +++...+
T Consensus 115 ~lKvIlE-t~~L----t~eei~~a~~ia~eaGADfVKTS--TGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~v 187 (226)
T 1vcv_A 115 VVKVITE-EPYL----RDEERYTLYDIIAEAGAHFIKSS--TGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGV 187 (226)
T ss_dssp EEEEECC-GGGC----CHHHHHHHHHHHHHHTCSEEECC--CSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEE
T ss_pred CceEEEe-ccCC----CHHHHHHHHHHHHHcCCCEEEeC--CCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceE
Confidence 3454433 4666 57889999999999999875443 2222 111111 123344555555 7753455
Q ss_pred EEEEeccCCCCHHHHHHHHHHHHHcCCC----EEEcCCCCC
Q psy965 177 KTILAVGELKTSENIYCASMTAMFAGSD----FIKTSGSIQ 213 (214)
Q Consensus 177 KvIlEt~~L~t~e~i~~A~~ia~~aGaD----FIKTSTGf~ 213 (214)
|+ .|=..|.++..+..+.+ ++|++ =|=||+|..
T Consensus 188 Ka---aGGirt~~~al~~i~a~-~~Ga~~~~fRiGtS~~~~ 224 (226)
T 1vcv_A 188 KM---AGGIRTREQAKAIVDAI-GWGEDPARVRLGTSTPEA 224 (226)
T ss_dssp EE---ESSCCSHHHHHHHHHHH-CSCSCTTTEEEEESCGGG
T ss_pred EE---eCCCCCHHHHHHHHHHH-HCCCCcCCceEecCchhh
Confidence 54 45566888887777666 68999 999998853
No 189
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=63.63 E-value=36 Score=27.09 Aligned_cols=107 Identities=6% Similarity=-0.020 Sum_probs=60.4
Q ss_pred CcccHHHHHHhhhcCCCCCCeEEEecCCCCC--------CCC--------HHHHHHHHHHHHHCCCCEEEEecChhHhhc
Q psy965 90 FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSG--------QYL--------LETRLHEIELLAKQKVDEVDIVIQRSLVLN 153 (214)
Q Consensus 90 ~P~~V~~a~~~L~~~gs~v~vatV~igFP~G--------~~~--------~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s 153 (214)
++..+...++.++ ..++++.++ ..|.| ..+ .+.=..-++.|-+.|+.-+ |+..|....
T Consensus 38 ~~~~~~~~~~~l~--~~gl~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v--~~~~g~~~~ 111 (260)
T 1k77_A 38 YNYSTLQIQKQLE--QNHLTLALF--NTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV--HVMAGVVPA 111 (260)
T ss_dssp TTSCHHHHHHHHH--HTTCEEEEE--ECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTCSEE--ECCCCBCCT
T ss_pred CCCCHHHHHHHHH--HcCCceEEE--ecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCCCEE--EECcCCCCC
Confidence 3445666777777 467887776 33432 111 1122345666777899875 554443321
Q ss_pred -----CChhHHHHHHHHHHHHhcCCceEEEEEecc--------CCCCHHHHHHHHHHHHHcCCCEE
Q psy965 154 -----NQWPELFSEVKQMKEKCGEKIHMKTILAVG--------ELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 154 -----g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~--------~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
..|+.+.+-++.+.+.+.. .-+++-+|+- .+.+.++. .+++-+.|.+.+
T Consensus 112 ~~~~~~~~~~~~~~l~~l~~~a~~-~gv~l~~E~~~~~~~~~~~~~~~~~~---~~l~~~~~~~~~ 173 (260)
T 1k77_A 112 GEDAERYRAVFIDNIRYAADRFAP-HGKRILVEALSPGVKPHYLFSSQYQA---LAIVEEVARDNV 173 (260)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHGG-GTCEEEECCCCTTTSTTBSCCSHHHH---HHHHHHHCCTTE
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHH-cCCEEEEEeCCccCCCcCccCCHHHH---HHHHHHhCCCCE
Confidence 2345566677777776654 4589999985 35555554 444444454433
No 190
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=63.48 E-value=27 Score=29.15 Aligned_cols=109 Identities=6% Similarity=-0.127 Sum_probs=60.5
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCC-------CCCCHHHH-------HHHHHHHHHCCCCEEEEecChhH-----h--
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPS-------GQYLLETR-------LHEIELLAKQKVDEVDIVIQRSL-----V-- 151 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~-------G~~~~~~K-------~~E~~~Ai~~GAdEID~Vin~~~-----l-- 151 (214)
.++..++.|+ ..++++.++ ..+|. +....+.+ ...++.|.+.||.-| |+..+. +
T Consensus 71 ~~~~~~~~l~--~~Gl~i~~~-~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lGa~~v--~~~~g~~~~~~~~~ 145 (316)
T 3qxb_A 71 RAIAYAKAFR--KAGLTIEST-FGGLASYTYNHFLAPTLELQSLGYQHLKRAIDMTAAMEVPAT--GMPFGSYSAADALN 145 (316)
T ss_dssp HHHHHHHHHH--HTTCEEEEE-ECCHHHHTSCBTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEE--EECCBBCCHHHHTC
T ss_pred HHHHHHHHHH--HcCCeEEEe-eccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE--EecCCCcCccccCC
Confidence 4566677777 478888776 33322 22222221 235677788999975 333221 1
Q ss_pred ---hcCChhHHHHHHHHHHHHhcCCceEE-EEEec-----cCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 152 ---LNNQWPELFSEVKQMKEKCGEKIHMK-TILAV-----GELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 152 ---~sg~~~~v~~Ei~~v~~a~~~~~~lK-vIlEt-----~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
....|+.+.+-++++.+.+.. .-++ +-+|+ ..+.+.++..+..+.....|.+.++
T Consensus 146 ~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~~l~lE~~~~~~~~~~t~~~~~~l~~~v~~~~~~~vg 209 (316)
T 3qxb_A 146 PARREEIYAIARDMWIELAAYAKR-QGLSMLYVEPVPLATEFPSSAADAARLMADLDGRTEIPVR 209 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HTCCEEEECCCSCTTBSSCSHHHHHHHHHHHTTTSSSCEE
T ss_pred cccHHHHHHHHHHHHHHHHHHHHh-cCCeEEEEEecCCccccCCCHHHHHHHHHHHhccCCCCEE
Confidence 122355666667777766654 3477 99998 2355666665544443222555443
No 191
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=63.41 E-value=6.9 Score=31.36 Aligned_cols=80 Identities=10% Similarity=-0.032 Sum_probs=45.9
Q ss_pred CCeEEEecCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHH---HHHHHHHHHHhcCCceEEEEEecc
Q psy965 108 QPCLSQPAGFP-SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPEL---FSEVKQMKEKCGEKIHMKTILAVG 183 (214)
Q Consensus 108 v~vatV~igFP-~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v---~~Ei~~v~~a~~~~~~lKvIlEt~ 183 (214)
+++|.+ +.-- ... . =...++.+++.|++-|-+...- ++...+ .+.++.+++.|.. ..+.++++.
T Consensus 18 ~~i~~I-t~~~~~~~-~---~~~~~~~~~~~G~~~i~l~~~~-----~~~~~~~~~~~~~~~l~~~~~~-~~v~v~v~~- 85 (227)
T 2tps_A 18 LSVYFI-MGSNNTKA-D---PVTVVQKALKGGATLYQFREKG-----GDALTGEARIKFAEKAQAACRE-AGVPFIVND- 85 (227)
T ss_dssp TTEEEE-ECGGGCSS-C---HHHHHHHHHHHTCSEEEECCCS-----TTCCCHHHHHHHHHHHHHHHHH-HTCCEEEES-
T ss_pred CCEEEE-ECCccccc-h---HHHHHHHHHHCCCCEEEEecCC-----CCHhHHHHHHHHHHHHHHHHHH-cCCeEEEcC-
Confidence 567877 4321 111 1 2446788889999998877432 233333 4455555555542 234566641
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 184 ELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 184 ~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
. .+.+.++|+|+|-.+
T Consensus 86 ---~-------~~~a~~~gad~v~l~ 101 (227)
T 2tps_A 86 ---D-------VELALNLKADGIHIG 101 (227)
T ss_dssp ---C-------HHHHHHHTCSEEEEC
T ss_pred ---H-------HHHHHHcCCCEEEEC
Confidence 1 236778899999764
No 192
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=63.34 E-value=14 Score=33.32 Aligned_cols=85 Identities=7% Similarity=0.018 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHCCCCEEEEecChhHhh-----------c--------CChhHHHHHHHHHHHHhcC-CceEEEEEec---
Q psy965 126 TRLHEIELLAKQKVDEVDIVIQRSLVL-----------N--------NQWPELFSEVKQMKEKCGE-KIHMKTILAV--- 182 (214)
Q Consensus 126 ~K~~E~~~Ai~~GAdEID~Vin~~~l~-----------s--------g~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt--- 182 (214)
.=..-++.|.+.|.|-||+=.--|+|+ . ++...+.+=+++|++++++ +..+|+=...
T Consensus 172 ~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~ 251 (402)
T 2hsa_B 172 DYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHL 251 (402)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCST
T ss_pred HHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccC
Confidence 335667888999999999876444333 1 1233455666888888874 2445543321
Q ss_pred ---cCCCCHHHHHHHHHHHHHcC------CCEEEcCCC
Q psy965 183 ---GELKTSENIYCASMTAMFAG------SDFIKTSGS 211 (214)
Q Consensus 183 ---~~L~t~e~i~~A~~ia~~aG------aDFIKTSTG 211 (214)
+.. +.++....++.+.++| +|||--|.|
T Consensus 252 g~~~~~-~~~~~~~la~~le~~G~~gg~~vd~i~v~~~ 288 (402)
T 2hsa_B 252 DAMDSN-PLSLGLAVVERLNKIQLHSGSKLAYLHVTQP 288 (402)
T ss_dssp TCCCSC-HHHHHHHHHHHHHHHHHHHTSCCSEEEEECC
T ss_pred CCCCCC-CHHHHHHHHHHHHhcCCccCCceEEEEEecC
Confidence 111 3456677788888999 999998876
No 193
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=63.05 E-value=75 Score=27.47 Aligned_cols=109 Identities=14% Similarity=0.010 Sum_probs=63.5
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEE---e-cCh-hHhhc--C---ChhHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDI---V-IQR-SLVLN--N---QWPELFSE 162 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~---V-in~-~~l~s--g---~~~~v~~E 162 (214)
++..++...+ +++++ .+ ++.|+|+...+.-..-++..++.||.-|=+ + +.+ |.+-. + ..++..+=
T Consensus 67 m~~~~~~I~~--~~~~P--vi-aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~r 141 (295)
T 1s2w_A 67 VVEVLEFMSD--ASDVP--IL-LDADTGYGNFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALK 141 (295)
T ss_dssp HHHHHHHHHH--TCSSC--EE-EECCSSCSSHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHH
T ss_pred HHHHHHHHHh--cCCCC--EE-ecCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHH
Confidence 4445554444 56665 34 699999877666666688888999987643 2 111 11110 1 22355566
Q ss_pred HHHHHHHhcCCceEEEEEeccCCCC---HHHHHHHHHHHHHcCCCEEE
Q psy965 163 VKQMKEKCGEKIHMKTILAVGELKT---SENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 163 i~~v~~a~~~~~~lKvIlEt~~L~t---~e~i~~A~~ia~~aGaDFIK 207 (214)
|++++++... ..++++==|..+.. .++..+=++...+||||-|=
T Consensus 142 I~Aa~~a~~~-~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~ 188 (295)
T 1s2w_A 142 IKACKDSQTD-PDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAIL 188 (295)
T ss_dssp HHHHHHHCSS-TTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHhccc-CCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEE
Confidence 7777776533 34777776654411 34444445677799999774
No 194
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=62.57 E-value=22 Score=30.42 Aligned_cols=76 Identities=11% Similarity=0.058 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc--
Q psy965 124 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA-- 201 (214)
Q Consensus 124 ~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a-- 201 (214)
.+.=+..+++.++.|||-||+-.--+ ....++.+..=|+++++.+ .+-+.|.|. ..+ + .+.|.++
T Consensus 33 ~~~a~~~a~~~v~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~----~~pisIDT~---~~~-v---~~aal~a~~ 99 (271)
T 2yci_X 33 PRPIQEWARRQAEKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVV----DLPCCLDST---NPD-A---IEAGLKVHR 99 (271)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHC----CCCEEEECS---CHH-H---HHHHHHHCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhC----CCeEEEeCC---CHH-H---HHHHHHhCC
Confidence 35566788999999999999976542 1123444545555555433 244677776 223 2 3444555
Q ss_pred CCCEEEcCCCC
Q psy965 202 GSDFIKTSGSI 212 (214)
Q Consensus 202 GaDFIKTSTGf 212 (214)
|++.|..-+|.
T Consensus 100 Ga~iINdvs~~ 110 (271)
T 2yci_X 100 GHAMINSTSAD 110 (271)
T ss_dssp SCCEEEEECSC
T ss_pred CCCEEEECCCC
Confidence 99999865654
No 195
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=62.42 E-value=9.2 Score=31.79 Aligned_cols=56 Identities=16% Similarity=0.108 Sum_probs=33.9
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHH-HHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEV-KQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei-~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
.+++.|++.|||=+ + +|..+ .++ ...++ .+ ..+|+. -. |.+++.+ |.++|+||||
T Consensus 80 d~~~~A~~aGAd~v--~-------~p~~d---~~v~~~ar~-~g----~~~i~G--v~-t~~e~~~----A~~~Gad~vk 135 (224)
T 1vhc_A 80 EQVVLAKSSGADFV--V-------TPGLN---PKIVKLCQD-LN----FPITPG--VN-NPMAIEI----ALEMGISAVK 135 (224)
T ss_dssp HHHHHHHHHTCSEE--E-------CSSCC---HHHHHHHHH-TT----CCEECE--EC-SHHHHHH----HHHTTCCEEE
T ss_pred HHHHHHHHCCCCEE--E-------ECCCC---HHHHHHHHH-hC----CCEEec--cC-CHHHHHH----HHHCCCCEEE
Confidence 79999999999876 2 22222 232 22332 33 234554 23 7777754 5688999998
Q ss_pred c
Q psy965 208 T 208 (214)
Q Consensus 208 T 208 (214)
-
T Consensus 136 ~ 136 (224)
T 1vhc_A 136 F 136 (224)
T ss_dssp E
T ss_pred E
Confidence 4
No 196
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=62.41 E-value=19 Score=31.46 Aligned_cols=77 Identities=9% Similarity=0.146 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecCh---hHh-h--cCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHH
Q psy965 124 LETRLHEIELLAKQKVDEVDIVIQR---SLV-L--NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMT 197 (214)
Q Consensus 124 ~~~K~~E~~~Ai~~GAdEID~Vin~---~~l-~--sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~i 197 (214)
.+.=+..+++.++.|||-||+=.-- |+- . .-.++.+..-|+++++ ..+.+-|.|-.- +..+.
T Consensus 51 ~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~-----~~vpiSIDT~~~-------~Va~a 118 (294)
T 2dqw_A 51 PERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLS-----LGVPVSVDTRKP-------EVAEE 118 (294)
T ss_dssp --CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHT-----TCSCEEEECSCH-------HHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHh-----CCCeEEEECCCH-------HHHHH
Confidence 4555778999999999999987522 110 0 1112223333333332 123455566532 33455
Q ss_pred HHHcCCCEEEcCCCC
Q psy965 198 AMFAGSDFIKTSGSI 212 (214)
Q Consensus 198 a~~aGaDFIKTSTGf 212 (214)
|.++|+|.|.--+|+
T Consensus 119 Al~aGa~iINdVsg~ 133 (294)
T 2dqw_A 119 ALKLGAHLLNDVTGL 133 (294)
T ss_dssp HHHHTCSEEECSSCS
T ss_pred HHHhCCCEEEECCCC
Confidence 666799999877775
No 197
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=62.08 E-value=33 Score=29.35 Aligned_cols=75 Identities=16% Similarity=0.111 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHHCC-CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC---CCHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQK-VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL---KTSENIYCASMTA 198 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~G-AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L---~t~e~i~~A~~ia 198 (214)
.-+.++.-.+.+++.| ++-||+=+..+ .+.++++.+.++. ...|||+---.. .+.+++..-..-+
T Consensus 117 ~~~~~~~ll~~~l~~g~~dyIDvEl~~~----------~~~~~~l~~~a~~-~~~kvI~S~Hdf~~tP~~~el~~~~~~~ 185 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDSGLVDMIDLELFTG----------DDEVKATVGYAHQ-HNVAVIMSNHDFHKTPAAEEIVQRLRKM 185 (276)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEEGGGC----------HHHHHHHHHHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEECcCC----------HHHHHHHHHHHHh-CCCEEEEEeecCCCCcCHHHHHHHHHHH
Confidence 3578888889999999 89999865442 1344555554432 347999864322 2457777777778
Q ss_pred HHcCCCEEEc
Q psy965 199 MFAGSDFIKT 208 (214)
Q Consensus 199 ~~aGaDFIKT 208 (214)
...|||.+|=
T Consensus 186 ~~~GaDIvKi 195 (276)
T 3o1n_A 186 QELGADIPKI 195 (276)
T ss_dssp HHTTCSEEEE
T ss_pred HHcCCCEEEE
Confidence 8899999994
No 198
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=62.08 E-value=48 Score=29.21 Aligned_cols=80 Identities=13% Similarity=0.090 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCC-hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQ-WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~-~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
.+.+.-..+++.+++.|.+-+.+ +.+ .+ .+...+=++++++++++. +.+.+....--+.++..+.++...+
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKi--k~g----~~~~~~~~e~v~avR~a~G~d--~~l~vDan~~~~~~~a~~~~~~l~~ 219 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKI--YPM----LDSLSISIQFVEKVREIVGDE--LPLMLDLAVPEDLDQTKSFLKEVSS 219 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEE--CCC----CSSHHHHHHHHHHHHHHHCSS--SCEEEECCCCSCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE--ccC----CChHHHHHHHHHHHHHHhCCC--CEEEEEcCCCCCHHHHHHHHHHHHh
Confidence 45676778899999999999885 333 12 456667788899888752 3444554332267777777777788
Q ss_pred cCCCEEEcC
Q psy965 201 AGSDFIKTS 209 (214)
Q Consensus 201 aGaDFIKTS 209 (214)
.|.+||--+
T Consensus 220 ~~i~~iEqP 228 (391)
T 2qgy_A 220 FNPYWIEEP 228 (391)
T ss_dssp GCCSEEECS
T ss_pred cCCCeEeCC
Confidence 999999744
No 199
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=62.07 E-value=29 Score=30.41 Aligned_cols=81 Identities=15% Similarity=0.177 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhc---CCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCG---EKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~---~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
..+.=+..+++.++.|||-||+=.--. .-| ..-...+|+..+..... ....+-+-|.|-.- ...+.|
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeST--rPGa~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~~-------~Va~aA 101 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGEST--RPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKS-------QVAEAA 101 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSCH-------HHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcC--CCCCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCCH-------HHHHHH
Confidence 466677889999999999999875211 001 12233567666655432 10123455555422 345667
Q ss_pred HHcCCCEEEcCCCC
Q psy965 199 MFAGSDFIKTSGSI 212 (214)
Q Consensus 199 ~~aGaDFIKTSTGf 212 (214)
.++|+|.|.-=||+
T Consensus 102 l~aGa~iINDVsg~ 115 (314)
T 2vef_A 102 LAAGADLVNDITGL 115 (314)
T ss_dssp HHTTCCEEEETTTT
T ss_pred HHcCCCEEEECCCC
Confidence 77899999977775
No 200
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=62.02 E-value=13 Score=31.14 Aligned_cols=59 Identities=15% Similarity=0.150 Sum_probs=36.8
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceE------EEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHM------KTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~l------KvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
..+++.|++.||+=| +.++. -.| +.+.|.. ..+ -+|= |.. |.+|+.+| .++
T Consensus 75 ~~~a~~ai~AGA~fi-vsP~~-----------~~e---vi~~~~~-~~v~~~~~~~~~P--G~~-TptE~~~A----~~~ 131 (217)
T 3lab_A 75 ADDFQKAIDAGAQFI-VSPGL-----------TPE---LIEKAKQ-VKLDGQWQGVFLP--GVA-TASEVMIA----AQA 131 (217)
T ss_dssp HHHHHHHHHHTCSEE-EESSC-----------CHH---HHHHHHH-HHHHCSCCCEEEE--EEC-SHHHHHHH----HHT
T ss_pred HHHHHHHHHcCCCEE-EeCCC-----------cHH---HHHHHHH-cCCCccCCCeEeC--CCC-CHHHHHHH----HHc
Confidence 679999999999875 33331 112 2233332 223 3333 445 88888654 789
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|+|+||.-
T Consensus 132 Gad~vK~F 139 (217)
T 3lab_A 132 GITQLKCF 139 (217)
T ss_dssp TCCEEEET
T ss_pred CCCEEEEC
Confidence 99999974
No 201
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=61.99 E-value=27 Score=30.78 Aligned_cols=81 Identities=14% Similarity=0.126 Sum_probs=52.7
Q ss_pred HHHHHHHHCCCCEEEEecChhHhh-------------------cCChhHHHHHHHHHHHHhcCC--ceEEEEEec---cC
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVL-------------------NNQWPELFSEVKQMKEKCGEK--IHMKTILAV---GE 184 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~-------------------sg~~~~v~~Ei~~v~~a~~~~--~~lKvIlEt---~~ 184 (214)
.-++.|.+.|.|-||+=.--|+|+ .++...+.+=+++|++++++. ..+|+=.+. +-
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g 226 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGG 226 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTS
T ss_pred HHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccC
Confidence 346678889999999864333322 113345667778888888742 334443321 11
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 185 LKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+ +.++....++...++ +|||--|.|
T Consensus 227 ~-~~~~~~~~a~~l~~~-vd~i~vs~g 251 (343)
T 3kru_A 227 I-NIDMMVEYINMIKDK-VDLIDVSSG 251 (343)
T ss_dssp C-CHHHHHHHHHHHTTT-CSEEEEECC
T ss_pred c-cHHHHHHHHHHhhcc-ccEEeccCC
Confidence 3 467777888888889 999998766
No 202
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=61.85 E-value=43 Score=29.55 Aligned_cols=90 Identities=10% Similarity=0.018 Sum_probs=61.6
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
.+++... +|. .+.+.-..+++.+++.|.+-+.+=+ | ++.+...+=++++++++++.. .+.+....--
T Consensus 134 ~vp~~~~-~g~----~~~e~~~~~a~~~~~~Gf~~vKik~--g----~~~~~~~e~v~avR~a~g~d~--~l~vDan~~~ 200 (397)
T 2qde_A 134 RIPLGLV-LGA----GEPEAVAEEALAVLREGFHFVKLKA--G----GPLKADIAMVAEVRRAVGDDV--DLFIDINGAW 200 (397)
T ss_dssp SEEBCEE-CCC----SCHHHHHHHHHHHHHHTCSCEEEEC--C----SCHHHHHHHHHHHHHHHCTTS--CEEEECTTCC
T ss_pred CcceEEE-CCC----CCHHHHHHHHHHHHHhhhhheeecc--c----CCHHHHHHHHHHHHHhhCCCC--EEEEECCCCC
Confidence 4555544 343 4567778899999999999988632 2 355666677888999887533 3455543322
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+.++..+.++...+.|.+||--+
T Consensus 201 ~~~~a~~~~~~l~~~~i~~iEqP 223 (397)
T 2qde_A 201 TYDQALTTIRALEKYNLSKIEQP 223 (397)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECC
T ss_pred CHHHHHHHHHHHHhCCCCEEECC
Confidence 77777777877888899999754
No 203
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=61.85 E-value=71 Score=26.79 Aligned_cols=85 Identities=18% Similarity=0.128 Sum_probs=56.8
Q ss_pred CCCCeEEEecCCCCCCC-----CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE
Q psy965 106 VYQPCLSQPAGFPSGQY-----LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL 180 (214)
Q Consensus 106 s~v~vatV~igFP~G~~-----~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl 180 (214)
.++++.- -.||.|.+ +.+.+..-++.|.+.|||-|=.-.. +. .+.++.+++.++. .++|.+
T Consensus 137 ~~~~vIi--~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~vkt~~~------~~----~e~~~~~~~~~~~-~pV~as- 202 (263)
T 1w8s_A 137 FDLPLVV--ESFPRGGKVVNETAPEIVAYAARIALELGADAMKIKYT------GD----PKTFSWAVKVAGK-VPVLMS- 202 (263)
T ss_dssp HTCCEEE--EECCCSTTCCCTTCHHHHHHHHHHHHHHTCSEEEEECC------SS----HHHHHHHHHHTTT-SCEEEE-
T ss_pred cCCeEEE--EeeCCCCccccCCCHHHHHHHHHHHHHcCCCEEEEcCC------CC----HHHHHHHHHhCCC-CeEEEE-
Confidence 3566643 37887765 5566665579999999987544421 22 2667888888742 254444
Q ss_pred eccCCC--CHHHHHHHHHHHHHcCCCEE
Q psy965 181 AVGELK--TSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 181 Et~~L~--t~e~i~~A~~ia~~aGaDFI 206 (214)
-| .. +.++..+....++++||+.+
T Consensus 203 -GG-i~~~~~~~~l~~i~~~~~aGA~Gv 228 (263)
T 1w8s_A 203 -GG-PKTKTEEDFLKQVEGVLEAGALGI 228 (263)
T ss_dssp -CC-SCCSSHHHHHHHHHHHHHTTCCEE
T ss_pred -eC-CCCCCHHHHHHHHHHHHHcCCeEE
Confidence 33 44 67888888888999999965
No 204
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=61.79 E-value=78 Score=27.29 Aligned_cols=108 Identities=13% Similarity=0.009 Sum_probs=62.5
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEE---e-cC-hhHhh--cC---ChhHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDI---V-IQ-RSLVL--NN---QWPELFSE 162 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~---V-in-~~~l~--sg---~~~~v~~E 162 (214)
++..++..-+ +++++ .+ ++.|+|+...+.-..-++..++.||.-|=+ + +. .|.+- .+ ..++..+=
T Consensus 63 m~~~~~~I~~--~~~~P--vi-aD~d~Gyg~~~~~~~~v~~l~~aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~k 137 (290)
T 2hjp_A 63 HLEMMRAIAS--TVSIP--LI-ADIDTGFGNAVNVHYVVPQYEAAGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGK 137 (290)
T ss_dssp HHHHHHHHHT--TCSSC--EE-EECTTTTSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCC-------CCBCCHHHHHHH
T ss_pred HHHHHHHHHh--cCCCC--EE-EECCCCCCCHHHHHHHHHHHHHhCCeEEEEcCCCCCccccccccCCCcccCHHHHHHH
Confidence 3444444333 55666 34 699999877776677788888999987643 2 11 01111 11 12244556
Q ss_pred HHHHHHHhcCCceEEEEEeccCCC---CHHHHHHHHHHHHHcCCCEE
Q psy965 163 VKQMKEKCGEKIHMKTILAVGELK---TSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 163 i~~v~~a~~~~~~lKvIlEt~~L~---t~e~i~~A~~ia~~aGaDFI 206 (214)
|++++++... ..++++==|..+. ..++..+=+....+||||-|
T Consensus 138 I~Aa~~a~~~-~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i 183 (290)
T 2hjp_A 138 IAAATAARAD-RDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAI 183 (290)
T ss_dssp HHHHHHHCSS-TTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhccc-CCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEE
Confidence 7777776533 3467776665431 13444444567789999977
No 205
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=61.70 E-value=21 Score=31.23 Aligned_cols=76 Identities=11% Similarity=0.060 Sum_probs=49.9
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEec---cCCCCHHHHHH---HHHHHHHc
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV---GELKTSENIYC---ASMTAMFA 201 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt---~~L~t~e~i~~---A~~ia~~a 201 (214)
+..+..|.+.|||-|.+.=|. -.|....=+..++++++... .++.++|-- ..+-+++|+.. -...+.++
T Consensus 49 ~~~a~~A~~gGAdRIELc~~l---~~GGlTPS~g~i~~a~~~~~--ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~ 123 (287)
T 3iwp_A 49 VESAVNAERGGADRIELCSGL---SEGGTTPSMGVLQVVKQSVQ--IPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLY 123 (287)
T ss_dssp HHHHHHHHHHTCSEEEECBCG---GGTCBCCCHHHHHHHHTTCC--SCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEECCCC---CCCCCCCCHHHHHHHHHhcC--CCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHc
Confidence 457888889999999988443 44555555566666665442 778888853 23335555543 44577788
Q ss_pred CCCEEEc
Q psy965 202 GSDFIKT 208 (214)
Q Consensus 202 GaDFIKT 208 (214)
|+|.|--
T Consensus 124 GAdGvVf 130 (287)
T 3iwp_A 124 GADGLVF 130 (287)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9887753
No 206
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=61.49 E-value=50 Score=29.45 Aligned_cols=74 Identities=11% Similarity=0.084 Sum_probs=48.2
Q ss_pred HHHHHHH-HCCCCEEEEecChhH--hh-cC--ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 129 HEIELLA-KQKVDEVDIVIQRSL--VL-NN--QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 129 ~E~~~Ai-~~GAdEID~Vin~~~--l~-sg--~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
.|++.++ ..|||-+-+=+|... +. .| +++.+.+.|+.+++..+.+..+|- +-.+ + +.+. ++.+.++|
T Consensus 158 e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g-~-s~e~----A~~l~~aG 230 (365)
T 3sr7_A 158 QAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKE-VGFG-M-DVKT----IQTAIDLG 230 (365)
T ss_dssp HHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSC-C-CHHH----HHHHHHHT
T ss_pred HHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCC-C-CHHH----HHHHHHcC
Confidence 3667777 469988777777632 11 33 445577889999988765577883 2222 3 4333 45677999
Q ss_pred CCEEEcC
Q psy965 203 SDFIKTS 209 (214)
Q Consensus 203 aDFIKTS 209 (214)
+|+|.-+
T Consensus 231 ad~I~V~ 237 (365)
T 3sr7_A 231 VKTVDIS 237 (365)
T ss_dssp CCEEECC
T ss_pred CCEEEEe
Confidence 9999864
No 207
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=61.15 E-value=26 Score=31.34 Aligned_cols=76 Identities=14% Similarity=0.157 Sum_probs=50.6
Q ss_pred HHHHHHHHHCCCCEEEEecChhH-hhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSL-VLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~-l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
..+++.|.+.|+|-|.+- |.|. -.+|.. .-.+-+.+++++.++ .+.||..-|-- +.+.+.+|- ..|||.|
T Consensus 228 ~e~A~~a~~~GaD~I~vs-n~GG~~~d~~~-~~~~~L~~i~~av~~--~ipVia~GGI~-~g~Dv~kaL----alGA~aV 298 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVS-NHGGRQLDEVS-ASIDALREVVAAVKG--KIEVYMDGGVR-TGTDVLKAL----ALGARCI 298 (352)
T ss_dssp HHHHHHHHHTTCSEEEEC-CGGGTSSCSSC-CHHHHHHHHHHHHTT--SSEEEEESSCC-SHHHHHHHH----HTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEe-CCCCCccCCCc-cHHHHHHHHHHHhCC--CCeEEEECCCC-CHHHHHHHH----HcCCCEE
Confidence 467999999999999854 6554 222221 223445556666654 47888888855 777776543 4799999
Q ss_pred EcCCCC
Q psy965 207 KTSGSI 212 (214)
Q Consensus 207 KTSTGf 212 (214)
--+|.|
T Consensus 299 ~iGr~~ 304 (352)
T 3sgz_A 299 FLGRPI 304 (352)
T ss_dssp EESHHH
T ss_pred EECHHH
Confidence 877654
No 208
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=61.11 E-value=15 Score=32.11 Aligned_cols=79 Identities=9% Similarity=0.072 Sum_probs=52.5
Q ss_pred HHHHHHHHC----CCCEEEEecChhHhh-----cCChhHHHHHHHHHHHHhcC-CceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 129 HEIELLAKQ----KVDEVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCGE-KIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 129 ~E~~~Ai~~----GAdEID~Vin~~~l~-----sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
..++.|++. |+++|.+++..+.+. ....++..+.+..+++.+.. +..+-+=.|.+.-.+.+.+.+.++.+
T Consensus 81 ~~i~~a~~al~~ag~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~ 160 (325)
T 3eeg_A 81 ADINIAGEALRFAKRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAV 160 (325)
T ss_dssp HHHHHHHHHHTTCSSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHH
Confidence 345556666 999999987776653 23456667777777776654 23333334444444778888899999
Q ss_pred HHcCCCEEE
Q psy965 199 MFAGSDFIK 207 (214)
Q Consensus 199 ~~aGaDFIK 207 (214)
.++|+|-|-
T Consensus 161 ~~~G~~~i~ 169 (325)
T 3eeg_A 161 IEAGADVVN 169 (325)
T ss_dssp HHHTCSEEE
T ss_pred HhcCCCEEE
Confidence 999999763
No 209
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=60.97 E-value=9.9 Score=31.05 Aligned_cols=49 Identities=18% Similarity=0.109 Sum_probs=28.3
Q ss_pred ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHH---HHHHHHHHHHcCCCEEEcC
Q psy965 155 QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSEN---IYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 155 ~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~---i~~A~~ia~~aGaDFIKTS 209 (214)
+.....+.++++++.++ .+ |++-+ ++ +.-. ..+-.+.+.++|+|+|-..
T Consensus 64 ~~~~~~~~i~~i~~~~~--~p--v~~~~-~~-~~~~~~~~~~~~~~~~~~Gad~v~~~ 115 (248)
T 1geq_A 64 KLREAFWIVKEFRRHSS--TP--IVLMT-YY-NPIYRAGVRNFLAEAKASGVDGILVV 115 (248)
T ss_dssp CHHHHHHHHHHHHTTCC--CC--EEEEE-CH-HHHHHHCHHHHHHHHHHHTCCEEEET
T ss_pred CHHHHHHHHHHHHhhCC--CC--EEEEe-cc-chhhhcCHHHHHHHHHHCCCCEEEEC
Confidence 34556778888887653 23 33322 22 2100 1345678889999998654
No 210
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=60.28 E-value=56 Score=28.60 Aligned_cols=86 Identities=5% Similarity=-0.002 Sum_probs=60.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHH
Q psy965 116 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCAS 195 (214)
Q Consensus 116 gFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~ 195 (214)
++..|..+.+.-+.+++.+++.|.+-+-+=+. ++.+.-.+=+++++++.|+ .+.+.+....=-+.++-.+.+
T Consensus 133 ~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG------~~~~~d~~~v~avR~~~g~--~~~l~vDaN~~~~~~~A~~~~ 204 (368)
T 3q45_A 133 DYTVSIDEPHKMAADAVQIKKNGFEIIKVKVG------GSKELDVERIRMIREAAGD--SITLRIDANQGWSVETAIETL 204 (368)
T ss_dssp CEEECSCCHHHHHHHHHHHHHTTCSEEEEECC------SCHHHHHHHHHHHHHHHCS--SSEEEEECTTCBCHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHHHHHHcCCCeEEEEec------CCHHHHHHHHHHHHHHhCC--CCeEEEECCCCCChHHHHHHH
Confidence 33345567888889999999999998876542 2345555667888888875 345666654333777777777
Q ss_pred HHHHHcCCCEEEcC
Q psy965 196 MTAMFAGSDFIKTS 209 (214)
Q Consensus 196 ~ia~~aGaDFIKTS 209 (214)
+...+.|.+||--+
T Consensus 205 ~~l~~~~i~~iEqP 218 (368)
T 3q45_A 205 TLLEPYNIQHCEEP 218 (368)
T ss_dssp HHHGGGCCSCEECC
T ss_pred HHHhhcCCCEEECC
Confidence 77778899998644
No 211
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=60.01 E-value=53 Score=29.37 Aligned_cols=105 Identities=10% Similarity=-0.008 Sum_probs=65.8
Q ss_pred HhhhcC-CCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhH-hhc--CChhHHHHHHHHHHHHhcCCc
Q psy965 99 DNLKTK-LVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSL-VLN--NQWPELFSEVKQMKEKCGEKI 174 (214)
Q Consensus 99 ~~L~~~-gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~-l~s--g~~~~v~~Ei~~v~~a~~~~~ 174 (214)
++|... ...+++-+. + |..+.+.-+.+++.+++.|.+-+-++-.-+. ... .+.+.-.+=++++++++|+
T Consensus 105 ~LLGG~~r~~v~~y~~-~----~~~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~-- 177 (405)
T 3rr1_A 105 ELLGGLVRDKMRTYSW-V----GGDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGN-- 177 (405)
T ss_dssp HHTTCCSCSCEEEEEE-C----CCSSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGG--
T ss_pred HHhCccccCceeeeEe-C----CCCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCC--
Confidence 456521 234666555 3 4566788888999999999999998321100 000 0123344556777777765
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 175 HMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 175 ~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
-+.+++....=-+.++..+.++...+.|.+||--+.
T Consensus 178 d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~ 213 (405)
T 3rr1_A 178 TVEFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPV 213 (405)
T ss_dssp GSEEEEECCSCBCHHHHHHHHHHHGGGCCSCEECSS
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC
Confidence 245566654333778877888888889999997544
No 212
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=59.97 E-value=63 Score=28.22 Aligned_cols=105 Identities=15% Similarity=0.102 Sum_probs=60.9
Q ss_pred HHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEE---ecC--hhHhhcC---ChhHHHHHHHH
Q psy965 94 VWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDI---VIQ--RSLVLNN---QWPELFSEVKQ 165 (214)
Q Consensus 94 V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~---Vin--~~~l~sg---~~~~v~~Ei~~ 165 (214)
+..++...+ +++++ .+ ++.|+|+...+.-..-++...+.||.-|=+ +.+ .|.+-.+ ..++..+=|++
T Consensus 78 ~~~~~~I~r--~~~~p--vi-aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~A 152 (305)
T 3ih1_A 78 AERARDLVR--ATDLP--VL-VDIDTGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKA 152 (305)
T ss_dssp HHHHHHHHH--HHCCC--EE-EECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHH
T ss_pred HHHHHHHHH--hcCCC--EE-EECCCCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHH
Confidence 334443333 44555 34 689999877665555678888899987633 211 1111111 23466777888
Q ss_pred HHHHhcCCceEEEEEeccCC--CCHHHHHHHHHHHHHcCCCEE
Q psy965 166 MKEKCGEKIHMKTILAVGEL--KTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 166 v~~a~~~~~~lKvIlEt~~L--~t~e~i~~A~~ia~~aGaDFI 206 (214)
++++ + ..+++|==|..+ ...++..+=++...+||||-|
T Consensus 153 a~~A-~--~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i 192 (305)
T 3ih1_A 153 IKEV-A--PSLYIVARTDARGVEGLDEAIERANAYVKAGADAI 192 (305)
T ss_dssp HHHH-C--TTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHc-C--CCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEE
Confidence 8877 3 356777666543 123444444557778999976
No 213
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=59.60 E-value=26 Score=31.47 Aligned_cols=45 Identities=20% Similarity=0.170 Sum_probs=29.7
Q ss_pred hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 156 WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 156 ~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.+...++|+.+++..+.+..+|-+ + +.+. ++.+.++|+|+|-.|.
T Consensus 237 ~~~~~~~i~~lr~~~~~PvivKgv-----~-~~e~----A~~a~~aGad~I~vs~ 281 (392)
T 2nzl_A 237 PSISWEDIKWLRRLTSLPIVAKGI-----L-RGDD----AREAVKHGLNGILVSN 281 (392)
T ss_dssp TTCCHHHHHHHC--CCSCEEEEEE-----C-CHHH----HHHHHHTTCCEEEECC
T ss_pred hHHHHHHHHHHHHhhCCCEEEEec-----C-CHHH----HHHHHHcCCCEEEeCC
Confidence 334566788888877645778854 3 4333 5677899999998863
No 214
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=59.58 E-value=29 Score=28.35 Aligned_cols=89 Identities=13% Similarity=0.044 Sum_probs=56.0
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE-EeccC--
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE-- 184 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~~-- 184 (214)
.+++.....||. .+++.. ++.+.+.|.+-|++...- + ..++.++++++.. .-|++. +-.++
T Consensus 26 mklg~~~~~~~~--~~~~~~---l~~~~~~G~~~vEl~~~~-------~---~~~~~~~~~~l~~-~gl~v~~~~~~~~~ 89 (287)
T 3kws_A 26 LKLSFQEGIAPG--ESLNEK---LDFMEKLGVVGFEPGGGG-------L---AGRVNEIKQALNG-RNIKVSAICAGFKG 89 (287)
T ss_dssp CEEEEETTSSCC--SSHHHH---HHHHHHTTCCEEECBSTT-------C---GGGHHHHHHHHTT-SSCEECEEECCCCS
T ss_pred eeEEEEecccCC--CCHHHH---HHHHHHcCCCEEEecCCc-------h---HHHHHHHHHHHHH-cCCeEEEEecCCCC
Confidence 456555345554 455543 456667899999998762 1 2356666666654 345653 33332
Q ss_pred -CC--C-------HHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 185 -LK--T-------SENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 185 -L~--t-------~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
|. + .+.+.++.+.|...|+++|...+|+
T Consensus 90 ~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~ 127 (287)
T 3kws_A 90 FILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAF 127 (287)
T ss_dssp CTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCc
Confidence 21 1 1456778899999999999988775
No 215
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=59.44 E-value=39 Score=29.81 Aligned_cols=77 Identities=8% Similarity=0.043 Sum_probs=49.0
Q ss_pred HHHHHHHHCCCCEEEEecC---hhHhhcCChhHHHHHHHHHHHH-------hcCCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 129 HEIELLAKQKVDEVDIVIQ---RSLVLNNQWPELFSEVKQMKEK-------CGEKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin---~~~l~sg~~~~v~~Ei~~v~~a-------~~~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
.+++.+.+.|||-|++ -| .+....|---...+-+.+++++ .++ ..+.||..-| +.+.+.+.+|-
T Consensus 223 e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~-~~ipvia~GG-I~~~~dv~kal--- 296 (393)
T 2qr6_A 223 TTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGG-RYVHIIADGS-IENSGDVVKAI--- 296 (393)
T ss_dssp HHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTS-CCCEEEECSS-CCSHHHHHHHH---
T ss_pred HHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCC-cceEEEEECC-CCCHHHHHHHH---
Confidence 4688999999999998 34 2223332112334455555555 332 1377887777 54778776554
Q ss_pred HHcCCCEEEcCCCC
Q psy965 199 MFAGSDFIKTSGSI 212 (214)
Q Consensus 199 ~~aGaDFIKTSTGf 212 (214)
.+|||+|-.+|.|
T Consensus 297 -alGA~~V~iG~~~ 309 (393)
T 2qr6_A 297 -ACGADAVVLGSPL 309 (393)
T ss_dssp -HHTCSEEEECGGG
T ss_pred -HcCCCEEEECHHH
Confidence 3699999888875
No 216
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=59.25 E-value=30 Score=30.30 Aligned_cols=63 Identities=10% Similarity=0.053 Sum_probs=38.0
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.|+++|++.|||-|-+ -+.+. +++++.++...+ .+++. -+|=+ |.+++.... +.|+|||.+
T Consensus 220 de~~eAl~aGaD~I~L-------Dn~~~----~~l~~av~~i~~--~v~ie-aSGGI-~~~~i~~~a----~tGVD~isv 280 (298)
T 3gnn_A 220 DQLRTALAHGARSVLL-------DNFTL----DMMRDAVRVTEG--RAVLE-VSGGV-NFDTVRAIA----ETGVDRISI 280 (298)
T ss_dssp HHHHHHHHTTCEEEEE-------ESCCH----HHHHHHHHHHTT--SEEEE-EESSC-STTTHHHHH----HTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEE-------CCCCH----HHHHHHHHHhCC--CCeEE-EEcCC-CHHHHHHHH----HcCCCEEEE
Confidence 4899999999864322 12233 445555544443 34433 34557 778775433 689999987
Q ss_pred CC
Q psy965 209 SG 210 (214)
Q Consensus 209 ST 210 (214)
++
T Consensus 281 G~ 282 (298)
T 3gnn_A 281 GA 282 (298)
T ss_dssp GG
T ss_pred CC
Confidence 65
No 217
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=59.09 E-value=31 Score=29.97 Aligned_cols=80 Identities=13% Similarity=0.112 Sum_probs=55.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc-CCCCHHHHH-HHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-ELKTSENIY-CASMTA 198 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~-~L~t~e~i~-~A~~ia 198 (214)
..+.+.-..+++.+++.|.+-+.+ +.| ++.+...+=++++++++|+.. .+.+... -+ +.++.. +.++..
T Consensus 139 ~~~~~~~~~~a~~~~~~Gf~~iKi--k~g----~~~~~~~e~v~avr~a~g~~~--~l~vDan~~~-~~~~a~~~~~~~l 209 (369)
T 2p8b_A 139 IADPENMAEEAASMIQKGYQSFKM--KVG----TNVKEDVKRIEAVRERVGNDI--AIRVDVNQGW-KNSANTLTALRSL 209 (369)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEE--ECC----SCHHHHHHHHHHHHHHHCTTS--EEEEECTTTT-BSHHHHHHHHHTS
T ss_pred CCChHHHHHHHHHHHHcCcCEEEE--EeC----CCHHHHHHHHHHHHHHhCCCC--eEEEECCCCC-CHHHHHHHHHHHH
Confidence 345666778999999999999996 333 256666777888999887533 4455543 34 556665 666666
Q ss_pred HHcCCCEEEcC
Q psy965 199 MFAGSDFIKTS 209 (214)
Q Consensus 199 ~~aGaDFIKTS 209 (214)
.+.|.+||--.
T Consensus 210 ~~~~i~~iEqP 220 (369)
T 2p8b_A 210 GHLNIDWIEQP 220 (369)
T ss_dssp TTSCCSCEECC
T ss_pred HhCCCcEEECC
Confidence 77899998644
No 218
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=58.71 E-value=40 Score=29.52 Aligned_cols=80 Identities=8% Similarity=-0.005 Sum_probs=54.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
|..+.+.-..+++.+.+.|.+-|.+ +.|. +.+...+=++++++++++. +.+.+....--+.++..+.++...
T Consensus 142 ~~~~~~~~~~~a~~~~~~Gf~~iKi--k~g~----~~~~~~e~v~avr~a~g~d--~~l~vDan~~~~~~~a~~~~~~l~ 213 (379)
T 2rdx_A 142 PQRSEAETRAELARHRAAGYRQFQI--KVGA----DWQSDIDRIRACLPLLEPG--EKAMADANQGWRVDNAIRLARATR 213 (379)
T ss_dssp CCSCSHHHHHHHHHHHHTTCCEEEE--ECCS----CHHHHHHHHHHHGGGSCTT--CEEEEECTTCSCHHHHHHHHHHTT
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEE--eccC----CHHHHHHHHHHHHHhcCCC--CEEEEECCCCCCHHHHHHHHHHHH
Confidence 3345677778999999999999996 3321 4566666778888888752 344555433226677767777777
Q ss_pred HcCCCEEEc
Q psy965 200 FAGSDFIKT 208 (214)
Q Consensus 200 ~aGaDFIKT 208 (214)
+.|. ||--
T Consensus 214 ~~~i-~iE~ 221 (379)
T 2rdx_A 214 DLDY-ILEQ 221 (379)
T ss_dssp TSCC-EEEC
T ss_pred hCCe-EEeC
Confidence 7899 8853
No 219
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=58.62 E-value=29 Score=29.66 Aligned_cols=88 Identities=13% Similarity=0.016 Sum_probs=54.4
Q ss_pred cCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igFP~-G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
.|.|. |..+.+.=+.-++.+.+.|+|+|=+.=-.|. +..+.+++=++++++..++ .+ |+.--=++...-..
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~-~~----l~~H~Hn~~Gla~A 219 (302)
T 2ftp_A 148 LGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVPR-ER----LAGHFHDTYGQALA 219 (302)
T ss_dssp TCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSCG-GG----EEEEEBCTTSCHHH
T ss_pred eeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCCC-Ce----EEEEeCCCccHHHH
Confidence 35564 4455666566677788999999877733343 5677888888888765532 23 22221111111223
Q ss_pred HHHHHHHcCCCEEEcCC
Q psy965 194 ASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 194 A~~ia~~aGaDFIKTST 210 (214)
-+..|+++|++.|-+|-
T Consensus 220 n~laAv~aGa~~vd~tv 236 (302)
T 2ftp_A 220 NIYASLLEGIAVFDSSV 236 (302)
T ss_dssp HHHHHHHTTCCEEEEBG
T ss_pred HHHHHHHhCCCEEEecc
Confidence 35677899999999874
No 220
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=58.47 E-value=23 Score=28.59 Aligned_cols=66 Identities=11% Similarity=0.062 Sum_probs=36.5
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe-ccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA-VGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE-t~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.++.+.+.|||-|=+..-- + .+.+.++++.++. .-++.+++ .+-+ |.+++..+ .+.|+||+.+
T Consensus 75 ~~~~~~~aGad~i~vh~~~-----~-----~~~~~~~~~~~~~-~g~~~~~d~l~~~-T~~~~~~~----~~~g~d~v~~ 138 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAA-----H-----IATIAACKKVADE-LNGEIQIEIYGNW-TMQDAKAW----VDLGITQAIY 138 (218)
T ss_dssp HHHHHHHHTCSEEEEETTS-----C-----HHHHHHHHHHHHH-HTCEEEEECCSSC-CHHHHHHH----HHTTCCEEEE
T ss_pred HHHHHHhcCCCEEEEecCC-----C-----HHHHHHHHHHHHH-hCCccceeeeecC-CHHHHHHH----HHcCccceee
Confidence 6789999999976444221 1 1223444444432 22455542 2334 66665544 3449999987
Q ss_pred CCC
Q psy965 209 SGS 211 (214)
Q Consensus 209 STG 211 (214)
.+|
T Consensus 139 ~~~ 141 (218)
T 3jr2_A 139 HRS 141 (218)
T ss_dssp ECC
T ss_pred eec
Confidence 554
No 221
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=58.34 E-value=42 Score=32.02 Aligned_cols=70 Identities=19% Similarity=0.188 Sum_probs=51.9
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
..-++..++.|+|- +||+.. .|.-+.+.+-++.+++..++ +.||--.- .|. .+++..+++|||+||
T Consensus 283 ~eR~~aLv~AGvD~--iviD~a---hGhs~~v~~~i~~ik~~~p~---~~viaGNV--aT~----e~a~~Li~aGAD~vk 348 (556)
T 4af0_A 283 KDRLKLLAEAGLDV--VVLDSS---QGNSVYQIEFIKWIKQTYPK---IDVIAGNV--VTR----EQAAQLIAAGADGLR 348 (556)
T ss_dssp HHHHHHHHHTTCCE--EEECCS---CCCSHHHHHHHHHHHHHCTT---SEEEEEEE--CSH----HHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCcE--EEEecc---ccccHHHHHHHHHHHhhCCc---ceEEeccc--cCH----HHHHHHHHcCCCEEe
Confidence 45667788999987 578874 58889999999999987654 55665544 243 345667889999999
Q ss_pred cCCC
Q psy965 208 TSGS 211 (214)
Q Consensus 208 TSTG 211 (214)
-.-|
T Consensus 349 VGiG 352 (556)
T 4af0_A 349 IGMG 352 (556)
T ss_dssp ECSS
T ss_pred ecCC
Confidence 7655
No 222
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=58.21 E-value=59 Score=26.74 Aligned_cols=65 Identities=20% Similarity=0.295 Sum_probs=41.2
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.-++.+++.|++-|.+-.+ +.+ -.+-|+++++..++ +-+-.-| .+ +.++ .++|+++|||||-
T Consensus 32 ~~~~~al~~gGv~~iel~~k-----~~~---~~~~i~~l~~~~~~---l~vgaGt-vl-~~d~----~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITFR-----SEA---AADAIRLLRANRPD---FLIAAGT-VL-TAEQ----VVLAKSSGADFVV 94 (224)
T ss_dssp HHHHHHHHHTTCCEEEEETT-----STT---HHHHHHHHHHHCTT---CEEEEES-CC-SHHH----HHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEecc-----Cch---HHHHHHHHHHhCcC---cEEeeCc-Ee-eHHH----HHHHHHCCCCEEE
Confidence 45678889999998777643 222 23455666666553 3333344 34 5444 4688999999997
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
++
T Consensus 95 ~p 96 (224)
T 1vhc_A 95 TP 96 (224)
T ss_dssp CS
T ss_pred EC
Confidence 66
No 223
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=57.87 E-value=37 Score=31.34 Aligned_cols=106 Identities=15% Similarity=0.057 Sum_probs=63.7
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCC-CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhc
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQY-LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG 171 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~-~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~ 171 (214)
.+..+.+..++.| ..+-.. ++|=.|.- +.+-=+.-++.+.+.||++|=+.=-.|. .....+++=++++++..
T Consensus 128 ni~~~i~~ak~~G--~~v~~~-i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~DT~G~---~~P~~v~~lv~~l~~~~- 200 (464)
T 2nx9_A 128 NMQQALQAVKKMG--AHAQGT-LCYTTSPVHNLQTWVDVAQQLAELGVDSIALKDMAGI---LTPYAAEELVSTLKKQV- 200 (464)
T ss_dssp HHHHHHHHHHHTT--CEEEEE-EECCCCTTCCHHHHHHHHHHHHHTTCSEEEEEETTSC---CCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHCC--CEEEEE-EEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEcCCCCC---cCHHHHHHHHHHHHHhc-
Confidence 3444445555334 333323 24433332 5566666688889999998765533443 24777888888888754
Q ss_pred CCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 172 EKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 172 ~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.+.|+.-.=+|...-..-+..|+++|+|.|-+|-
T Consensus 201 -----~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti 234 (464)
T 2nx9_A 201 -----DVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAI 234 (464)
T ss_dssp -----CSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBC
T ss_pred -----CCeEEEEECCCCChHHHHHHHHHHhCCCEEEEec
Confidence 2334444333434344556788999999999874
No 224
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=57.83 E-value=10 Score=31.26 Aligned_cols=68 Identities=18% Similarity=0.168 Sum_probs=39.3
Q ss_pred HHHHHHHHHCCCC--EEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCE
Q psy965 128 LHEIELLAKQKVD--EVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 128 ~~E~~~Ai~~GAd--EID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDF 205 (214)
..+++.+.+.|+| ++|+. +-..+. +...-.+.++++++.|+.+..+-.++... +. -.+.+.++|||.
T Consensus 20 ~~~i~~~~~~Gad~ihldi~-DG~fvp--~~~~g~~~v~~lr~~~~~~~~vhlmv~dp-----~~---~i~~~~~aGadg 88 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVM-DGRFVP--NITIGPLIVDAIRPLTKKTLDVHLMIVEP-----EK---YVEDFAKAGADI 88 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEE-BSSSSS--CBCBCHHHHHHHGGGCCSEEEEEEESSSG-----GG---THHHHHHHTCSE
T ss_pred HHHHHHHHHcCCCEEEEEEE-ecCCCc--chhhhHHHHHHHHhhcCCcEEEEEEccCH-----HH---HHHHHHHcCCCE
Confidence 4578888889999 57873 211111 12233377788887774212222344332 22 246788889998
Q ss_pred E
Q psy965 206 I 206 (214)
Q Consensus 206 I 206 (214)
|
T Consensus 89 v 89 (230)
T 1tqj_A 89 I 89 (230)
T ss_dssp E
T ss_pred E
Confidence 8
No 225
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=57.35 E-value=11 Score=33.66 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=39.6
Q ss_pred HHCCCCEEEEecChhHhh-cCC--hh-HHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 135 AKQKVDEVDIVIQRSLVL-NNQ--WP-ELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 135 i~~GAdEID~Vin~~~l~-sg~--~~-~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++.||.+|+++.--..+. .|+ +. ...+.|+.+++..+-+..+|. +-.+ + +.+ .++.+.++|+|+|.-|
T Consensus 147 ~~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~-vG~g-~-s~~----~A~~l~~aGad~I~V~ 218 (368)
T 3vkj_A 147 IEADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE-SGNG-I-SME----TAKLLYSYGIKNFDTS 218 (368)
T ss_dssp TTCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC-SSSC-C-CHH----HHHHHHHTTCCEEECC
T ss_pred hcCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe-CCCC-C-CHH----HHHHHHhCCCCEEEEe
Confidence 356677766542222232 333 33 477888888877653355664 1222 3 433 3567889999999764
No 226
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=57.35 E-value=66 Score=29.65 Aligned_cols=82 Identities=16% Similarity=0.131 Sum_probs=51.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE--eccCCCCHHHHHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL--AVGELKTSENIYCASMTAM 199 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl--Et~~L~t~e~i~~A~~ia~ 199 (214)
.+-.+.-..++.|++.|+++|-+....+.+ +.+.+=++.+++ .| ..+-+=+ +.+.-.+.+...+.++.+.
T Consensus 97 ~~ddv~~~~v~~a~~~Gvd~i~if~~~sd~-----~ni~~~i~~ak~-~G--~~v~~~i~~~~~~~~~~e~~~~~a~~l~ 168 (464)
T 2nx9_A 97 YADDVVDTFVERAVKNGMDVFRVFDAMNDV-----RNMQQALQAVKK-MG--AHAQGTLCYTTSPVHNLQTWVDVAQQLA 168 (464)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEECCTTCCT-----HHHHHHHHHHHH-TT--CEEEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHhCCcCEEEEEEecCHH-----HHHHHHHHHHHH-CC--CEEEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 345566667889999999999988655433 333333333332 12 3333223 5454557788889999999
Q ss_pred HcCCCEE--EcCCC
Q psy965 200 FAGSDFI--KTSGS 211 (214)
Q Consensus 200 ~aGaDFI--KTSTG 211 (214)
++|+|-| |=+.|
T Consensus 169 ~~Gad~I~l~DT~G 182 (464)
T 2nx9_A 169 ELGVDSIALKDMAG 182 (464)
T ss_dssp HTTCSEEEEEETTS
T ss_pred HCCCCEEEEcCCCC
Confidence 9999975 43444
No 227
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=57.27 E-value=28 Score=30.33 Aligned_cols=74 Identities=9% Similarity=0.038 Sum_probs=41.5
Q ss_pred HHHHHHHHCCCCEEEEe----cChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCC
Q psy965 129 HEIELLAKQKVDEVDIV----IQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 204 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~V----in~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaD 204 (214)
..++.+-+.||++|-+. -++.++..=....-.+.|+++++++. .|+=+..-.+.+ ++ .+++..+|||
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~--iPvl~k~~i~~i---de----~qil~aaGAD 102 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCIS--INVLAKVRIGHF---VE----AQILEELKVD 102 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCC--SEEEEEEETTCH---HH----HHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcC--CCEEEeccCCcH---HH----HHHHHHcCCC
Confidence 45788888999999776 35555442022233456667777764 455444434432 22 3344579999
Q ss_pred EEEcCCC
Q psy965 205 FIKTSGS 211 (214)
Q Consensus 205 FIKTSTG 211 (214)
+|-+|.+
T Consensus 103 ~Id~s~~ 109 (297)
T 4adt_A 103 MLDESEV 109 (297)
T ss_dssp EEEEETT
T ss_pred EEEcCCC
Confidence 9955443
No 228
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=57.19 E-value=67 Score=27.45 Aligned_cols=184 Identities=9% Similarity=0.027 Sum_probs=104.2
Q ss_pred hcccCHHHHHHHHHHhhhhhhhhhHh------H--HHHHHHhhhhhcccCCCCC--CCHHHHHHHHHHhhc-cCchhhhc
Q psy965 16 DIQINTKYLEDLTRQFEAVDLSRIKN------K--KSLLLKIIEFIDLTTLSGD--DTEAVVETLTLKAIQ-PLSEELKE 84 (214)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~l~~~~~~ID~TlL~~~--~T~~~I~~lc~eA~~-~f~~~~~~ 84 (214)
.+.+....-.+-++.|....++.|++ . .++++++....+.+.+..- ....++++.++.... ..... .
T Consensus 21 ~~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v--~ 98 (293)
T 3ewb_X 21 GVNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQI--H 98 (293)
T ss_dssp --CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSEEE--E
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCCEE--E
Confidence 55666666677777777666666621 1 4567776666554433221 356788887765332 11100 0
Q ss_pred cccccCccc---------------HHHHHHhhhcCCCCCCeEEEecCCC-CCCCCHHHHHHHHHHHHHCCCCEEEEecCh
Q psy965 85 KVLRGFVST---------------VWHGSDNLKTKLVYQPCLSQPAGFP-SGQYLLETRLHEIELLAKQKVDEVDIVIQR 148 (214)
Q Consensus 85 ~~~cv~P~~---------------V~~a~~~L~~~gs~v~vatV~igFP-~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~ 148 (214)
.+...++.+ +..+.+..++.| ..+.. +.| .|..+.+.-+.-++.+.+.||++|=+.=-.
T Consensus 99 i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g--~~v~~---~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~ 173 (293)
T 3ewb_X 99 IFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKF--DVVQF---SPEDATRSDRAFLIEAVQTAIDAGATVINIPDTV 173 (293)
T ss_dssp EEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTC--SCEEE---EEETGGGSCHHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred EEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCC--CEEEE---EeccCCCCCHHHHHHHHHHHHHcCCCEEEecCCC
Confidence 011122222 223333344223 33322 223 345666766777888899999998665444
Q ss_pred hHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 149 SLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 149 ~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
|. .....+++=++.+++..++ .. ++.|+.-.=+|...-..-+..|+++|++.|-+|-+
T Consensus 174 G~---~~P~~v~~lv~~l~~~~~~-~~-~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~ 231 (293)
T 3ewb_X 174 GY---TNPTEFGQLFQDLRREIKQ-FD-DIIFASHCHDDLGMATANALAAIENGARRVEGTIN 231 (293)
T ss_dssp SC---CCHHHHHHHHHHHHHHCTT-GG-GSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred CC---CCHHHHHHHHHHHHHhcCC-cc-CceEEEEeCCCcChHHHHHHHHHHhCCCEEEeecc
Confidence 43 4677888888888887664 11 24455554444444445667889999999998743
No 229
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=57.17 E-value=53 Score=28.80 Aligned_cols=81 Identities=11% Similarity=0.058 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCC-HHHHHHHHHHHHHcCC
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT-SENIYCASMTAMFAGS 203 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t-~e~i~~A~~ia~~aGa 203 (214)
+.-+.+++.+++.|.+-+.+=+... .++.+.-.+=+++++++.++ -+.+++....=-+ .++-.+.++...+.|.
T Consensus 148 e~~~~~a~~~~~~Gf~~iKlk~g~~---g~~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~d~~~A~~~~~~l~~~~i 222 (374)
T 3sjn_A 148 EDNVAIVQGLKDQGFSSIKFGGGVM---GDDPDTDYAIVKAVREAAGP--EMEVQIDLASKWHTCGHSAMMAKRLEEFNL 222 (374)
T ss_dssp GGGHHHHHHHHTTTCSEEEEECTTT---TSCHHHHHHHHHHHHHHHCS--SSEEEEECTTTTCSHHHHHHHHHHSGGGCC
T ss_pred HHHHHHHHHHHHcCCCEEEeccCCC---CCCHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCCHHHHHHHHHHhhhcCc
Confidence 6667789999999999988754321 13567777778888998875 3566677654336 7777777777778899
Q ss_pred CEEEcCC
Q psy965 204 DFIKTSG 210 (214)
Q Consensus 204 DFIKTST 210 (214)
+||--+.
T Consensus 223 ~~iEqP~ 229 (374)
T 3sjn_A 223 NWIEEPV 229 (374)
T ss_dssp SEEECSS
T ss_pred eEEECCC
Confidence 9996543
No 230
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=57.07 E-value=45 Score=28.99 Aligned_cols=85 Identities=14% Similarity=0.067 Sum_probs=59.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHH
Q psy965 117 FPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASM 196 (214)
Q Consensus 117 FP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ 196 (214)
+-.|..+.+.-+.+++.+++.|.+-+.+=+.. +.+.-.+=+++++++.++ .+.+.+....=-+.++-.+.++
T Consensus 133 ~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~------~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~~~~a~~~~~ 204 (354)
T 3jva_A 133 ITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGT------GIEADIARVKAIREAVGF--DIKLRLDANQAWTPKDAVKAIQ 204 (354)
T ss_dssp EEECSCCHHHHHHHHHHHHHTTCSEEEEECCS------CHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCHHHHHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCC------CHHHHHHHHHHHHHHcCC--CCeEEEECCCCCCHHHHHHHHH
Confidence 33455678888889999999999998875432 334455667888888875 3566676543337777767777
Q ss_pred HHHHcCCCEEEcC
Q psy965 197 TAMFAGSDFIKTS 209 (214)
Q Consensus 197 ia~~aGaDFIKTS 209 (214)
...+.|.+||--+
T Consensus 205 ~L~~~~i~~iEqP 217 (354)
T 3jva_A 205 ALADYQIELVEQP 217 (354)
T ss_dssp HTTTSCEEEEECC
T ss_pred HHHhcCCCEEECC
Confidence 7777899998644
No 231
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=56.99 E-value=48 Score=27.52 Aligned_cols=106 Identities=13% Similarity=0.075 Sum_probs=62.3
Q ss_pred cHHHHHHhhhcCCCCCCe-EEEecCCCCCC---CCHHHHHHHHHHHHHC-CCCEEEEecChhHhhcCChhHHHHHHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPC-LSQPAGFPSGQ---YLLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMK 167 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~v-atV~igFP~G~---~~~~~K~~E~~~Ai~~-GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~ 167 (214)
.|......|++.-.++|+ .|+ =.-+.|. .+-+.++.-.+.+++. |++-||+=++.. .-+ +.++.+.
T Consensus 48 ~v~~~~~~lr~~~~~~PiI~T~-R~~~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~-----~~~---~~~~~l~ 118 (238)
T 1sfl_A 48 QVAEMITKLKVMQDSFKLLVTY-RTKLQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQAD-----IDI---EKHQRII 118 (238)
T ss_dssp HHHHHHHHHC---CCSEEEEEC-CBGGGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTT-----SCH---HHHHHHH
T ss_pred HHHHHHHHHHHhccCCCEEEEe-eccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCC-----CCh---HHHHHHH
Confidence 444444445431113454 344 3344443 3466777778888887 699999866541 011 2334454
Q ss_pred HHhcCCceEEEEEeccCC---CCHHHHHHHHHHHHHcCCCEEEc
Q psy965 168 EKCGEKIHMKTILAVGEL---KTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 168 ~a~~~~~~lKvIlEt~~L---~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
+..+. ...|||+-.-.. .+.+++..-..-+...|||.+|=
T Consensus 119 ~~~~~-~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKi 161 (238)
T 1sfl_A 119 THLQQ-YNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKL 161 (238)
T ss_dssp HHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHh-cCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEE
Confidence 44433 357999976432 24577877777788899999994
No 232
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=56.98 E-value=57 Score=25.90 Aligned_cols=77 Identities=13% Similarity=0.187 Sum_probs=45.3
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE-EeccC---------CC-C--
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE---------LK-T-- 187 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~~---------L~-t-- 187 (214)
..+++..+ +.+.+.|.+-|++.... +++ .+++++..+.. -+++. +.++. +. +
T Consensus 14 ~~~~~~~l---~~~~~~G~~~vEl~~~~------~~~--~~~~~~~l~~~----gl~~~~~~~~~~~~~~g~~~~~~~~~ 78 (260)
T 1k77_A 14 EVPFIERF---AAARKAGFDAVEFLFPY------NYS--TLQIQKQLEQN----HLTLALFNTAPGDINAGEWGLSALPG 78 (260)
T ss_dssp TSCGGGHH---HHHHHHTCSEEECSCCT------TSC--HHHHHHHHHHT----TCEEEEEECCCCCGGGTCSCSTTCTT
T ss_pred CCCHHHHH---HHHHHhCCCEEEecCCC------CCC--HHHHHHHHHHc----CCceEEEecCCcccccccCCCCCChh
Confidence 45665555 34456699999887632 111 34444444332 35554 34332 11 1
Q ss_pred -----HHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 188 -----SENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 188 -----~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+.+.++.++|...|+.+|.+.+|+
T Consensus 79 ~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~ 108 (260)
T 1k77_A 79 REHEAHADIDLALEYALALNCEQVHVMAGV 108 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEECCCCB
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEECcCC
Confidence 2456778889999999999987775
No 233
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=56.97 E-value=68 Score=26.39 Aligned_cols=133 Identities=8% Similarity=-0.010 Sum_probs=75.5
Q ss_pred HHHHHHhhhhhcccCC---CCC---------CCHHHHHHHHHHhhccCchhhhccccc---cCcccHHHHHHhhhcCCCC
Q psy965 43 KSLLLKIIEFIDLTTL---SGD---------DTEAVVETLTLKAIQPLSEELKEKVLR---GFVSTVWHGSDNLKTKLVY 107 (214)
Q Consensus 43 ~~~l~~~~~~ID~TlL---~~~---------~T~~~I~~lc~eA~~~f~~~~~~~~~c---v~P~~V~~a~~~L~~~gs~ 107 (214)
.+.++++.+..|.-.+ +.+ .+.++++.+.+.-...+- ..+ ..|..+....+.+++ .+
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I~------l~~~~~~~p~~l~~~i~~~~~--~g 129 (229)
T 3q58_A 58 IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADIIA------FDASFRSRPVDIDSLLTRIRL--HG 129 (229)
T ss_dssp HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEEE------EECCSSCCSSCHHHHHHHHHH--TT
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEEE------ECccccCChHHHHHHHHHHHH--CC
Confidence 4566666666676654 221 366788877654432100 112 257777776666663 34
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecC-hhH-----hhcCChhHHHHHHHHHHHHhcCCceEEEEEe
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQ-RSL-----VLNNQWPELFSEVKQMKEKCGEKIHMKTILA 181 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin-~~~-----l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE 181 (214)
+.+.+- + ++ ..|++.|.+.|||.| .+| +++ ....+| +-++++++. .+.||-|
T Consensus 130 ~~v~~~-v------~t----~eea~~a~~~Gad~I--g~~~~g~t~~~~~~~~~~----~li~~l~~~-----~ipvIA~ 187 (229)
T 3q58_A 130 LLAMAD-C------ST----VNEGISCHQKGIEFI--GTTLSGYTGPITPVEPDL----AMVTQLSHA-----GCRVIAE 187 (229)
T ss_dssp CEEEEE-C------SS----HHHHHHHHHTTCSEE--ECTTTTSSSSCCCSSCCH----HHHHHHHTT-----TCCEEEE
T ss_pred CEEEEe-c------CC----HHHHHHHHhCCCCEE--EecCccCCCCCcCCCCCH----HHHHHHHHc-----CCCEEEE
Confidence 444433 1 12 478999999999987 333 332 111233 334444432 3568888
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 182 VGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 182 t~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
-| ..|.+++.++ +++|+|.|--+|
T Consensus 188 GG-I~t~~d~~~~----~~~GadgV~VGs 211 (229)
T 3q58_A 188 GR-YNTPALAANA----IEHGAWAVTVGS 211 (229)
T ss_dssp SS-CCSHHHHHHH----HHTTCSEEEECH
T ss_pred CC-CCCHHHHHHH----HHcCCCEEEEch
Confidence 88 5488888654 466999876543
No 234
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=56.73 E-value=66 Score=25.76 Aligned_cols=94 Identities=15% Similarity=0.096 Sum_probs=53.8
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE-EeccCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGEL 185 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~~L 185 (214)
..+++.- .|.++..+++.. ++.+.+.|.+-|++.... + ..++ -.+++.++++.+.. .-+++. +-....
T Consensus 17 ~~klg~~--~~~~~~~~~~~~---l~~~~~~G~~~vEl~~~~--~-~~~~--~~~~~~~~~~~l~~-~gl~i~~~~~~~~ 85 (257)
T 3lmz_A 17 PFHLGMA--GYTFVNFDLDTT---LKTLERLDIHYLCIKDFH--L-PLNS--TDEQIRAFHDKCAA-HKVTGYAVGPIYM 85 (257)
T ss_dssp SSEEEEC--GGGGTTSCHHHH---HHHHHHTTCCEEEECTTT--S-CTTC--CHHHHHHHHHHHHH-TTCEEEEEEEEEE
T ss_pred ceEEEEE--EEeecCCCHHHH---HHHHHHhCCCEEEEeccc--C-CCCC--CHHHHHHHHHHHHH-cCCeEEEEecccc
Confidence 4565544 344444566544 455667899999998662 1 1111 12344444444432 112322 122222
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 186 KTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
.+.+.+.++.+.|...|+.+|...+|
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 86 KSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 46688889999999999999987654
No 235
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=55.96 E-value=7.9 Score=33.62 Aligned_cols=66 Identities=15% Similarity=0.181 Sum_probs=48.8
Q ss_pred HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 131 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
+....+.|++-|-|- +.+-+ .-.+|++++.++|.. .-+ .|=-||=+ +.+++....++|.++|+..|
T Consensus 174 iaml~dmG~~SvKff-PM~Gl------~~leEl~avAkAca~-~g~-~lEPTGGI-dl~Nf~~I~~i~l~aGv~~v 239 (275)
T 3m6y_A 174 IALVRDMGGNSLKYF-PMKGL------AHEEEYRAVAKACAE-EGF-ALEPTGGI-DKENFETIVRIALEANVEQV 239 (275)
T ss_dssp HHHHHHHTCCEEEEC-CCTTT------TTHHHHHHHHHHHHH-HTC-EEEEBSSC-CTTTHHHHHHHHHHTTCSCB
T ss_pred HHHHHHcCCCeeeEe-ecCCc------ccHHHHHHHHHHHHH-cCc-eECCCCCc-cHhHHHHHHHHHHHcCCCee
Confidence 344555799999876 44333 347899999999964 234 44558888 77899999999999999765
No 236
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=55.88 E-value=19 Score=32.83 Aligned_cols=79 Identities=19% Similarity=0.170 Sum_probs=46.6
Q ss_pred HHHHHHHHHCCCCEEEEecChh-----HhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 128 LHEIELLAKQKVDEVDIVIQRS-----LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~-----~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
..+++.+.+.|||-|++-.--| ....|--..-..-+..+.++++. ..+.||..-| +.+.+.+.+|- .+|
T Consensus 289 ~e~a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~-~~ipvia~GG-I~~~~di~kal----a~G 362 (494)
T 1vrd_A 289 PEGTEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARK-YDVPIIADGG-IRYSGDIVKAL----AAG 362 (494)
T ss_dssp HHHHHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHT-TTCCEEEESC-CCSHHHHHHHH----HTT
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhh-cCCCEEEECC-cCCHHHHHHHH----HcC
Confidence 3467888999999998843211 11222111112333444444443 3467777766 54878776543 469
Q ss_pred CCEEEcCCCC
Q psy965 203 SDFIKTSGSI 212 (214)
Q Consensus 203 aDFIKTSTGf 212 (214)
||+|.-++.|
T Consensus 363 Ad~V~iGr~~ 372 (494)
T 1vrd_A 363 AESVMVGSIF 372 (494)
T ss_dssp CSEEEESHHH
T ss_pred CCEEEECHHH
Confidence 9999977655
No 237
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=55.61 E-value=16 Score=31.48 Aligned_cols=62 Identities=13% Similarity=0.109 Sum_probs=41.9
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
++.+|...|||-|=+ +...+ + .+++..+.+.|+. .-+.+++|+. |.++..+| .++|+|+|=+
T Consensus 134 qi~ea~~~GAD~VlL--i~a~L-~------~~~l~~l~~~a~~-lGl~~lvevh---~~eEl~~A----~~~ga~iIGi 195 (272)
T 3tsm_A 134 QVYEARSWGADCILI--IMASV-D------DDLAKELEDTAFA-LGMDALIEVH---DEAEMERA----LKLSSRLLGV 195 (272)
T ss_dssp HHHHHHHTTCSEEEE--ETTTS-C------HHHHHHHHHHHHH-TTCEEEEEEC---SHHHHHHH----TTSCCSEEEE
T ss_pred HHHHHHHcCCCEEEE--ccccc-C------HHHHHHHHHHHHH-cCCeEEEEeC---CHHHHHHH----HhcCCCEEEE
Confidence 678889999998433 33322 1 2456666666654 4589999997 66776544 4789999954
No 238
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=55.55 E-value=7.9 Score=33.22 Aligned_cols=66 Identities=18% Similarity=0.164 Sum_probs=49.0
Q ss_pred HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 131 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
+....+.|++-|-|- +.+-+ .-.+|++++.++|.. .-+ .|=-||=+ +.+++....++|.++|+..|
T Consensus 151 iaml~dmG~~SvKff-Pm~Gl------~~l~E~~avAka~a~-~g~-~lEPTGGI-dl~N~~~I~~i~l~aGv~~v 216 (249)
T 3m0z_A 151 IALLKDMGGSSIKYF-PMGGL------KHRAEFEAVAKACAA-HDF-WLEPTGGI-DLENYSEILKIALDAGVSKI 216 (249)
T ss_dssp HHHHHHTTCCEEEEC-CCTTT------TTHHHHHHHHHHHHH-TTC-EEEEBSSC-CTTTHHHHHHHHHHHTCSCB
T ss_pred HHHHHHcCCCeeeEe-ecCCc------ccHHHHHHHHHHHHH-cCc-eECCCCCc-cHhhHHHHHHHHHHcCCCee
Confidence 445556899999876 44333 347899999999964 224 45558888 77899999999999999765
No 239
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=55.46 E-value=33 Score=27.86 Aligned_cols=89 Identities=7% Similarity=0.066 Sum_probs=52.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChh-HhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC--C-----
Q psy965 116 GFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRS-LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK--T----- 187 (214)
Q Consensus 116 gFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~-~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~--t----- 187 (214)
.|+.-..+++.. ++.+.+.|.+-|++-...+ .+ ...-..++.++++++.. .-+++..=++++. .
T Consensus 9 ~~~~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~----~~~~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~ 80 (286)
T 3dx5_A 9 SFRHQLISFTDI---VQFAYENGFEGIELWGTHAQNL----YMQEYETTERELNCLKD-KTLEITMISDYLDISLSADFE 80 (286)
T ss_dssp GGTTSCCCHHHH---HHHHHHTTCCEEEEEHHHHHHH----HHHCHHHHHHHHHHTGG-GTCCEEEEECCCCCSTTSCHH
T ss_pred eccCCCCCHHHH---HHHHHHhCCCEEEEcccccccc----cccCHHHHHHHHHHHHH-cCCeEEEEecCCCCCCchhHH
Confidence 454322566654 4556678999999953221 01 11113566777776654 2344433233331 1
Q ss_pred --HHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 188 --SENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 188 --~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+.+.++.++|...|+.+|...+|+
T Consensus 81 ~~~~~~~~~i~~A~~lG~~~v~~~~g~ 107 (286)
T 3dx5_A 81 KTIEKCEQLAILANWFKTNKIRTFAGQ 107 (286)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEECSCS
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 2456778899999999999988885
No 240
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=55.45 E-value=56 Score=26.62 Aligned_cols=81 Identities=12% Similarity=0.129 Sum_probs=48.1
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
..++..|+ -.. +.+.=+.-++.+++.|++-|.+-.+ +... .+-|+++++..++ +-+---| .+
T Consensus 15 ~~~~i~v~-r~~----~~~~~~~~~~al~~gGv~~iel~~k-----~~~~---~~~i~~l~~~~~~---~~vgagt-vi- 76 (214)
T 1wbh_A 15 TGPVVPVI-VVK----KLEHAVPMAKALVAGGVRVLNVTLR-----TECA---VDAIRAIAKEVPE---AIVGAGT-VL- 76 (214)
T ss_dssp SCSEEEEE-CCS----SGGGHHHHHHHHHHTTCCEEEEESC-----STTH---HHHHHHHHHHCTT---SEEEEES-CC-
T ss_pred HCCEEEEE-ECC----CHHHHHHHHHHHHHcCCCEEEEeCC-----ChhH---HHHHHHHHHHCcC---CEEeeCE-EE-
Confidence 34677773 332 2233345678889999998877743 2222 3455556665543 2233334 34
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+.++ .++|+++|||||-++
T Consensus 77 ~~d~----~~~A~~aGAd~v~~p 95 (214)
T 1wbh_A 77 NPQQ----LAEVTEAGAQFAISP 95 (214)
T ss_dssp SHHH----HHHHHHHTCSCEEES
T ss_pred EHHH----HHHHHHcCCCEEEcC
Confidence 5444 468899999999765
No 241
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=55.12 E-value=70 Score=27.18 Aligned_cols=95 Identities=12% Similarity=-0.004 Sum_probs=63.4
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhc--CCceEEEEE-e-
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG--EKIHMKTIL-A- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~--~~~~lKvIl-E- 181 (214)
..++|.+-+ |...+..-+..++.|-+.|||-+=++.++ +.+...-+.+++-.++|.++++ + +-+|| .
T Consensus 71 gr~pviaGv-----g~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~~~s~~~l~~~f~~va~a~p~~~---lPiilYn~ 141 (294)
T 3b4u_A 71 APSRIVTGV-----LVDSIEDAADQSAEALNAGARNILLAPPS-YFKNVSDDGLFAWFSAVFSKIGKDA---RDILVYNI 141 (294)
T ss_dssp CGGGEEEEE-----CCSSHHHHHHHHHHHHHTTCSEEEECCCC-SSCSCCHHHHHHHHHHHHHHHCTTC---CCEEEEEC
T ss_pred CCCcEEEeC-----CCccHHHHHHHHHHHHhcCCCEEEEcCCc-CCCCCCHHHHHHHHHHHHHhcCCCC---CcEEEEEC
Confidence 355554442 66778888899999999999998666554 4441366889999999999883 3 23444 3
Q ss_pred ---ccCCCCHHHHHHHHHHHHHcC-CCEEEcCCC
Q psy965 182 ---VGELKTSENIYCASMTAMFAG-SDFIKTSGS 211 (214)
Q Consensus 182 ---t~~L~t~e~i~~A~~ia~~aG-aDFIKTSTG 211 (214)
||.--+.+.+.+.++ ..-. .-.||=|+|
T Consensus 142 P~~tg~~l~~~~~~~La~--~~pn~ivgiKds~g 173 (294)
T 3b4u_A 142 PSVTMVTLSVELVGRLKA--AFPGIVTGVKDSSG 173 (294)
T ss_dssp HHHHSCCCCHHHHHHHHH--HCTTTEEEEEECCC
T ss_pred cchhCcCCCHHHHHHHHH--hCCCcEEEEEECCC
Confidence 453226677755541 2344 678888876
No 242
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=55.07 E-value=64 Score=25.98 Aligned_cols=68 Identities=10% Similarity=0.171 Sum_probs=37.6
Q ss_pred HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 131 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++.+.+.||+.|-+. +.. +...........+++++.. ..+.+|+--+ +.+.+++. .+.++|||.|--.
T Consensus 36 a~~~~~~Gad~i~v~-d~~----~~~~~~~~~~~~i~~i~~~-~~ipvi~~gg-I~~~~~~~----~~~~~Gad~V~lg 103 (253)
T 1thf_D 36 GKFYSEIGIDELVFL-DIT----ASVEKRKTMLELVEKVAEQ-IDIPFTVGGG-IHDFETAS----ELILRGADKVSIN 103 (253)
T ss_dssp HHHHHHTTCCEEEEE-ESS----CSSSHHHHHHHHHHHHHTT-CCSCEEEESS-CCSHHHHH----HHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEE-CCc----hhhcCCcccHHHHHHHHHh-CCCCEEEeCC-CCCHHHHH----HHHHcCCCEEEEC
Confidence 466778899998776 332 2222222233333333333 3456777655 45766543 4446799988543
No 243
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=54.93 E-value=39 Score=30.56 Aligned_cols=78 Identities=19% Similarity=0.124 Sum_probs=47.7
Q ss_pred HHHHHHHHCCCCEEEEecC-----hhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 129 HEIELLAKQKVDEVDIVIQ-----RSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin-----~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
..++.+++.||+-|++-.- ......|--..-.+-+..+.++++. ..+.||..-| ..+.+.+.+|- .+||
T Consensus 286 ~~a~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~-~~ipvia~GG-i~~~~di~kal----~~GA 359 (491)
T 1zfj_A 286 EGARALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVARE-YGKTIIADGG-IKYSGDIVKAL----AAGG 359 (491)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHH-TTCEEEEESC-CCSHHHHHHHH----HTTC
T ss_pred HHHHHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhh-cCCCEEeeCC-CCCHHHHHHHH----HcCC
Confidence 3455788999999988531 1222322112233445555555542 2366787777 44888887654 4699
Q ss_pred CEEEcCCCC
Q psy965 204 DFIKTSGSI 212 (214)
Q Consensus 204 DFIKTSTGf 212 (214)
|+|-.+|-|
T Consensus 360 ~~v~vG~~~ 368 (491)
T 1zfj_A 360 NAVMLGSMF 368 (491)
T ss_dssp SEEEESTTT
T ss_pred cceeeCHHh
Confidence 999887765
No 244
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=54.83 E-value=41 Score=26.56 Aligned_cols=82 Identities=17% Similarity=0.238 Sum_probs=47.7
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
+..+++.++-+ . ..+.=...++.+.+.|++-|-+...- .+ ..+.|+++++..+ +.+|+-.|-.
T Consensus 5 ~~~~i~~~i~~----~-d~~~~~~~~~~~~~~G~~~i~l~~~~-----~~---~~~~i~~i~~~~~----~~l~vg~g~~ 67 (212)
T 2v82_A 5 TKLPLIAILRG----I-TPDEALAHVGAVIDAGFDAVEIPLNS-----PQ---WEQSIPAIVDAYG----DKALIGAGTV 67 (212)
T ss_dssp SSSCEEEECTT----C-CHHHHHHHHHHHHHHTCCEEEEETTS-----TT---HHHHHHHHHHHHT----TTSEEEEECC
T ss_pred CCCCEEEEEeC----C-CHHHHHHHHHHHHHCCCCEEEEeCCC-----hh---HHHHHHHHHHhCC----CCeEEEeccc
Confidence 45667666322 2 33444567888889999988776442 11 1345555555433 2344433333
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEc
Q psy965 186 KTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.+.+. .+.+.++|+|||-.
T Consensus 68 ~~~~~----i~~a~~~Gad~V~~ 86 (212)
T 2v82_A 68 LKPEQ----VDALARMGCQLIVT 86 (212)
T ss_dssp CSHHH----HHHHHHTTCCEEEC
T ss_pred cCHHH----HHHHHHcCCCEEEe
Confidence 34443 46778899999963
No 245
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=54.16 E-value=1.1e+02 Score=26.77 Aligned_cols=83 Identities=12% Similarity=0.120 Sum_probs=58.4
Q ss_pred CCCCHHHHHHHHHHHHHC-CCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~-GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
|..+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++++++.++ .+.+.+....=-+.++..+.++..
T Consensus 145 ~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~~~~A~~~~~~l 217 (383)
T 3i4k_A 145 GVLPLDVAVAEIEERIEEFGNRSFKLKMGA-----GDPAEDTRRVAELAREVGD--RVSLRIDINARWDRRTALHYLPIL 217 (383)
T ss_dssp CSCCHHHHHHHHHHHHHHHCCSEEEEECCS-----SCHHHHHHHHHHHHHTTTT--TSEEEEECTTCSCHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHhcCCcEEEEeeCC-----CCHHHHHHHHHHHHHHcCC--CCEEEEECCCCCCHHHHHHHHHHH
Confidence 344677778899999998 99998864421 2455556667888888775 245556654333777777878888
Q ss_pred HHcCCCEEEcC
Q psy965 199 MFAGSDFIKTS 209 (214)
Q Consensus 199 ~~aGaDFIKTS 209 (214)
.+.|.+||--+
T Consensus 218 ~~~~i~~iEqP 228 (383)
T 3i4k_A 218 AEAGVELFEQP 228 (383)
T ss_dssp HHTTCCEEESC
T ss_pred HhcCCCEEECC
Confidence 88999999744
No 246
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=53.99 E-value=48 Score=26.83 Aligned_cols=106 Identities=10% Similarity=-0.064 Sum_probs=58.3
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCCCCCC--CHHHH----HHHHHHHHHCCCCEEEEecChhHhh-----cCChhHHH
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFPSGQY--LLETR----LHEIELLAKQKVDEVDIVIQRSLVL-----NNQWPELF 160 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP~G~~--~~~~K----~~E~~~Ai~~GAdEID~Vin~~~l~-----sg~~~~v~ 160 (214)
..+...++.|+ ..++++.++ ..|+.... ..+.- ..-++.|.+.||.-|=+ ..|... ...|+.+.
T Consensus 48 ~~~~~~~~~l~--~~gl~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~--~~g~~~~~~~~~~~~~~~~ 122 (286)
T 3dx5_A 48 ETTERELNCLK--DKTLEITMI-SDYLDISLSADFEKTIEKCEQLAILANWFKTNKIRT--FAGQKGSADFSQQERQEYV 122 (286)
T ss_dssp HHHHHHHHHTG--GGTCCEEEE-ECCCCCSTTSCHHHHHHHHHHHHHHHHHHTCCEEEE--CSCSSCGGGSCHHHHHHHH
T ss_pred HHHHHHHHHHH--HcCCeEEEE-ecCCCCCCchhHHHHHHHHHHHHHHHHHhCCCEEEE--cCCCCCcccCcHHHHHHHH
Confidence 44556667777 467888877 44431111 11211 23466677789987543 333221 12456667
Q ss_pred HHHHHHHHHhcCCceEEEEEecc---CCCCHHHHHHHHHHHHHcCCCEE
Q psy965 161 SEVKQMKEKCGEKIHMKTILAVG---ELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 161 ~Ei~~v~~a~~~~~~lKvIlEt~---~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
+-++.+.+.+.. .-+++-+|+. .+.+.++. .++.-..|.+.+
T Consensus 123 ~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~~~---~~l~~~~~~~~v 167 (286)
T 3dx5_A 123 NRIRMICELFAQ-HNMYVLLETHPNTLTDTLPST---LELLGEVDHPNL 167 (286)
T ss_dssp HHHHHHHHHHHH-TTCEEEEECCTTSTTSSHHHH---HHHHHHHCCTTE
T ss_pred HHHHHHHHHHHH-hCCEEEEecCCCcCcCCHHHH---HHHHHhcCCCCe
Confidence 777777776654 4589999986 23344444 444444454433
No 247
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=53.97 E-value=38 Score=29.37 Aligned_cols=63 Identities=17% Similarity=0.274 Sum_probs=40.7
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.|+++|++.|||-|-+ + +.+. ++++.+++..++ .++ |.-.|=+ |.+++.. ..++|+|+|-+
T Consensus 219 ee~~eA~~aGaD~I~l--d-----~~~~----e~l~~~v~~~~~--~~~-I~ASGGI-t~~~i~~----~a~~GvD~isv 279 (296)
T 1qap_A 219 DELDDALKAGADIIML--D-----NFNT----DQMREAVKRVNG--QAR-LEVSGNV-TAETLRE----FAETGVDFISV 279 (296)
T ss_dssp HHHHHHHHTTCSEEEE--S-----SCCH----HHHHHHHHTTCT--TCC-EEECCCS-CHHHHHH----HHHTTCSEEEC
T ss_pred HHHHHHHHcCCCEEEE--C-----CCCH----HHHHHHHHHhCC--CCe-EEEECCC-CHHHHHH----HHHcCCCEEEE
Confidence 7888899999886543 2 1233 555666665554 233 3345667 8777753 35789999988
Q ss_pred CC
Q psy965 209 SG 210 (214)
Q Consensus 209 ST 210 (214)
|+
T Consensus 280 Gs 281 (296)
T 1qap_A 280 GA 281 (296)
T ss_dssp SH
T ss_pred eH
Confidence 75
No 248
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=53.85 E-value=1.1e+02 Score=26.35 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=45.5
Q ss_pred HHHHHHHHHCCCCEEEEec-ChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 128 LHEIELLAKQKVDEVDIVI-QRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vi-n~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
..+++.+.+.|+|-|-+-- ..|- .+|.. .-.+-+.++++..+ +.||..-| +.+.+++.++-. +|||.|
T Consensus 134 ~~~a~~a~~~GaD~i~v~g~~~GG-~~G~~-~~~~ll~~i~~~~~----iPviaaGG-I~~~~dv~~al~----~GA~gV 202 (326)
T 3bo9_A 134 DSLARMVERAGADAVIAEGMESGG-HIGEV-TTFVLVNKVSRSVN----IPVIAAGG-IADGRGMAAAFA----LGAEAV 202 (326)
T ss_dssp HHHHHHHHHTTCSCEEEECTTSSE-ECCSS-CHHHHHHHHHHHCS----SCEEEESS-CCSHHHHHHHHH----HTCSEE
T ss_pred HHHHHHHHHcCCCEEEEECCCCCc-cCCCc-cHHHHHHHHHHHcC----CCEEEECC-CCCHHHHHHHHH----hCCCEE
Confidence 3577888999999875531 1221 12321 12244555555432 45777766 657888865543 699999
Q ss_pred EcCCCC
Q psy965 207 KTSGSI 212 (214)
Q Consensus 207 KTSTGf 212 (214)
--+|+|
T Consensus 203 ~vGs~~ 208 (326)
T 3bo9_A 203 QMGTRF 208 (326)
T ss_dssp EESHHH
T ss_pred EechHH
Confidence 988875
No 249
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=53.77 E-value=32 Score=27.56 Aligned_cols=84 Identities=10% Similarity=0.051 Sum_probs=46.3
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecChhH--hhcCChhHHHHHHHHHHHHhcCCceEEE-EEeccC-CC--C---HH
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSL--VLNNQWPELFSEVKQMKEKCGEKIHMKT-ILAVGE-LK--T---SE 189 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~--l~sg~~~~v~~Ei~~v~~a~~~~~~lKv-IlEt~~-L~--t---~e 189 (214)
.+..+++..+ +.+.+.|.+-|++...... ..+ . .++.++++++.. .-+++ -+.+.+ +. + .+
T Consensus 16 ~~~~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~---~---~~~~~~~~~~~~-~gl~~~~~~~~~~~~~~~~~~~~ 85 (272)
T 2q02_A 16 APGLSIEAFF---RLVKRLEFNKVELRNDMPSGSVTD---D---LNYNQVRNLAEK-YGLEIVTINAVYPFNQLTEEVVK 85 (272)
T ss_dssp CTTSCHHHHH---HHHHHTTCCEEEEETTSTTSSTTT---T---CCHHHHHHHHHH-TTCEEEEEEEETTTTSCCHHHHH
T ss_pred cCCCCHHHHH---HHHHHcCCCEEEeecccccccccc---c---cCHHHHHHHHHH-cCCeEEechhhhccCCcHHHHHH
Confidence 3345555443 5566789999998754321 111 1 233344444332 22444 222211 21 1 24
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCC
Q psy965 190 NIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 190 ~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
...++.++|...|+++|.+.+|+
T Consensus 86 ~~~~~i~~a~~lG~~~v~~~~g~ 108 (272)
T 2q02_A 86 KTEGLLRDAQGVGARALVLCPLN 108 (272)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEEccCC
Confidence 56778889999999999987775
No 250
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=53.76 E-value=87 Score=26.95 Aligned_cols=90 Identities=12% Similarity=-0.049 Sum_probs=62.4
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE--ecc
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL--AVG 183 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl--Et~ 183 (214)
..++|.+-+ |. .+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- -+|| =||
T Consensus 80 grvpViaGv-----g~-st~~ai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~l----PiilYn~tg 147 (314)
T 3d0c_A 80 GRATVVAGI-----GY-SVDTAIELGKSAIDSGADCVMIHQPV-HPY-ITDAGAVEYYRNIIEALDA----PSIIYFKDA 147 (314)
T ss_dssp TSSEEEEEE-----CS-SHHHHHHHHHHHHHTTCSEEEECCCC-CSC-CCHHHHHHHHHHHHHHSSS----CEEEEECCT
T ss_pred CCCeEEecC-----Cc-CHHHHHHHHHHHHHcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhCCC----CEEEEeCCC
Confidence 356655442 56 77778889999999999998777654 344 3567888888999887752 2333 566
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 184 ELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 184 ~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
.| +.+.+.+.+ ..-..-.||=|+|
T Consensus 148 ~l-~~~~~~~La---~~pnIvgiKdssg 171 (314)
T 3d0c_A 148 HL-SDDVIKELA---PLDKLVGIKYAIN 171 (314)
T ss_dssp TS-CTHHHHHHT---TCTTEEEEEECCC
T ss_pred Cc-CHHHHHHHH---cCCCEEEEEeCCC
Confidence 64 667775554 2356777888876
No 251
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=53.44 E-value=74 Score=28.29 Aligned_cols=75 Identities=13% Similarity=0.095 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
..+++.|+.=++...+.|.++|++-.... -.++|+ .++++++..++ ..+-++.= . +.+.+.+|.+....
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~--~~~d~e----~v~~i~~~~~~-~~i~~l~r---~-~~~di~~a~~al~~ 98 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAA--SPGDFE----AVNAIAKTITK-STVCSLSR---A-IERDIRQAGEAVAP 98 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGG--CHHHHH----HHHHHHTTCSS-SEEEEEEE---S-SHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCC--CHHHHH----HHHHHHHhCCC-CeEEEEec---C-CHHHHHHHHHHHhh
Confidence 46899999999999999999999975431 112333 33444443333 33433331 1 56778777777777
Q ss_pred cCCCEE
Q psy965 201 AGSDFI 206 (214)
Q Consensus 201 aGaDFI 206 (214)
+|.+-|
T Consensus 99 ag~~~v 104 (370)
T 3rmj_A 99 APKKRI 104 (370)
T ss_dssp SSSEEE
T ss_pred CCCCEE
Confidence 898843
No 252
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=53.24 E-value=70 Score=31.23 Aligned_cols=81 Identities=17% Similarity=0.144 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
.+.+-=+.-++.+.+.||+.|=+.=-.|.+ ....+++=++++++..++ +.|+.-.=+|...-...+..|++|
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~---~P~~v~~lV~~lk~~~p~-----~~I~~H~Hnd~GlAvANslaAveA 329 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAGLL---KPTACTMLVSSLRDRFPD-----LPLHIHTHDTSGAGVAAMLACAQA 329 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTSCC---CHHHHHHHHHHHHHHSTT-----CCEEEECCCTTSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCCCc---CHHHHHHHHHHHHHhCCC-----CeEEEEECCCccHHHHHHHHHHHh
Confidence 466766777888999999987665334433 467888888888876642 345544443444444566788999
Q ss_pred CCCEEEcCC
Q psy965 202 GSDFIKTSG 210 (214)
Q Consensus 202 GaDFIKTST 210 (214)
|||.|-+|-
T Consensus 330 Ga~~VD~ti 338 (718)
T 3bg3_A 330 GADVVDVAA 338 (718)
T ss_dssp TCSEEEEBC
T ss_pred CCCEEEecC
Confidence 999999874
No 253
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=53.24 E-value=29 Score=29.17 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=40.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEE---EEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE-EeccCCCCHHHHHHH
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEV---DIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGELKTSENIYCA 194 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEI---D~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~~L~t~e~i~~A 194 (214)
.|+.+.+.-...++.+.+.|.+.+ |++.+.. -.++...+-+..+++..++ .+++| +.+. +.+++
T Consensus 73 ~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~----~~~~e~~~~~~~a~~~~~~--g~~vi~~~~~---~~~~a--- 140 (264)
T 1xm3_A 73 AGASTAEEAVRIARLAKASGLCDMIKVEVIGCSR----SLLPDPVETLKASEQLLEE--GFIVLPYTSD---DVVLA--- 140 (264)
T ss_dssp TTCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTT----TCCBCHHHHHHHHHHHHHT--TCCEEEEECS---CHHHH---
T ss_pred cccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCc----ccccchHHHHHHHHHHHCC--CeEEEEEcCC---CHHHH---
Confidence 377787776667777777655443 2322211 0133344444445544443 35666 5554 33443
Q ss_pred HHHHHHcCCCEE
Q psy965 195 SMTAMFAGSDFI 206 (214)
Q Consensus 195 ~~ia~~aGaDFI 206 (214)
+.+.++|+|||
T Consensus 141 -~~~~~~gad~v 151 (264)
T 1xm3_A 141 -RKLEELGVHAI 151 (264)
T ss_dssp -HHHHHHTCSCB
T ss_pred -HHHHHhCCCEE
Confidence 34456899998
No 254
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=53.14 E-value=56 Score=28.66 Aligned_cols=87 Identities=9% Similarity=0.036 Sum_probs=56.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhh------------cCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVL------------NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTS 188 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~------------sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~ 188 (214)
..+.+.-..+++.+++.|.+-+.+=+..+++- .++.+...+=++++++++++ -+.+.+....--+.
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~--d~~l~vD~n~~~~~ 212 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGP--EIELMVDLSGGLTT 212 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCC--CCEEEEECCCCCCH
Confidence 45667777899999999999988533211110 01224445567788888875 25566665433377
Q ss_pred HHHHHHHHHHHHcCCCEEEcC
Q psy965 189 ENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKTS 209 (214)
++..+.++...+.|.+||--+
T Consensus 213 ~~a~~~~~~l~~~~i~~iE~P 233 (392)
T 2poz_A 213 DETIRFCRKIGELDICFVEEP 233 (392)
T ss_dssp HHHHHHHHHHGGGCEEEEECC
T ss_pred HHHHHHHHHHHhcCCCEEECC
Confidence 777777777778899998654
No 255
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=53.06 E-value=94 Score=27.62 Aligned_cols=89 Identities=8% Similarity=0.041 Sum_probs=57.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecC-----------hhH--hhcCC-------hhHHHHHHHHHHHHhcCCceEEE
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQ-----------RSL--VLNNQ-------WPELFSEVKQMKEKCGEKIHMKT 178 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin-----------~~~--l~sg~-------~~~v~~Ei~~v~~a~~~~~~lKv 178 (214)
.|..+.+.-..+++.+++.|.+-+=+=+. .|. ....+ .+...+=++++++++|+. +.+
T Consensus 139 ~~~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d--~~l 216 (409)
T 3go2_A 139 PPVTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPD--VEI 216 (409)
T ss_dssp SCCCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTT--SEE
T ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCC--CEE
Confidence 35567788888999999999998776440 021 00011 123455678888888753 455
Q ss_pred EEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 179 ILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 179 IlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++....=-+.++-.+.++...+.|.+||--+
T Consensus 217 ~vDaN~~~~~~~A~~~~~~L~~~~i~~iE~P 247 (409)
T 3go2_A 217 LLDLNFNAKPEGYLKILRELADFDLFWVEID 247 (409)
T ss_dssp EEECTTCSCHHHHHHHHHHTTTSCCSEEECC
T ss_pred EEECCCCCCHHHHHHHHHHHhhcCCeEEEeC
Confidence 6665433377777777777778899998644
No 256
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=53.03 E-value=92 Score=27.34 Aligned_cols=88 Identities=9% Similarity=-0.052 Sum_probs=57.5
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHH-HhcCCceEEEEEeccCCCCHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKE-KCGEKIHMKTILAVGELKTSENIY 192 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~-a~~~~~~lKvIlEt~~L~t~e~i~ 192 (214)
+=| +.|.-..+.=..-+++.++.|++-|=+.=.-|-.-+=.. +|-.++.+ .+++ .+.||.-+|..+| ++..
T Consensus 36 TPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~----eEr~~vi~~~~~g--rvpViaGvg~~st-~eai 108 (344)
T 2hmc_A 36 TPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTD----EQRMEGVERLVKA--GIPVIVGTGAVNT-ASAV 108 (344)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCH----HHHHHHHHHHHHT--TCCEEEECCCSSH-HHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCH----HHHHHHHHHHhCC--CCcEEEecCCCCH-HHHH
Confidence 556 567778888888899999999988433322222222122 23333333 2332 4789999999855 5566
Q ss_pred HHHHHHHHcCCCEEEcC
Q psy965 193 CASMTAMFAGSDFIKTS 209 (214)
Q Consensus 193 ~A~~ia~~aGaDFIKTS 209 (214)
+.++.|.++|+|.|=-.
T Consensus 109 ~la~~A~~~Gadavlv~ 125 (344)
T 2hmc_A 109 AHAVHAQKVGAKGLMVI 125 (344)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhcCCCEEEEC
Confidence 88889999999987543
No 257
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=53.00 E-value=74 Score=26.22 Aligned_cols=106 Identities=8% Similarity=-0.026 Sum_probs=58.5
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCCCC----CCCHHH-------HHHHHHHHHHCCCCEEEEecCh----hHhhc---
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFPSG----QYLLET-------RLHEIELLAKQKVDEVDIVIQR----SLVLN--- 153 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP~G----~~~~~~-------K~~E~~~Ai~~GAdEID~Vin~----~~l~s--- 153 (214)
..+...++.++ ..++++.+. .+||.+ ....+. =..-++.|.+.|+.-|= ... |.+..
T Consensus 66 ~~~~~l~~~l~--~~gl~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~--~~~~~~~g~~~~~~~ 140 (309)
T 2hk0_A 66 AELATIRKSAK--DNGIILTAG-IGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIG--GALHSYWPIDYSQPV 140 (309)
T ss_dssp HHHHHHHHHHH--HTTCEEEEE-CCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEE--ECTTSCSSCCTTSCC
T ss_pred hhHHHHHHHHH--HcCCeEEEe-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE--eeccccccccCCCcC
Confidence 44666777777 478888886 677522 111121 12345667778998763 222 32211
Q ss_pred ---CChhHHHHHHHHHHHHhcCCceEEEEEecc------CCCCHHHHHHHHHHHHHcCCCEE
Q psy965 154 ---NQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 154 ---g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~------~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
..|+.+.+-++.+.+.+.. .-+++-+|+- .+.+.++.. +++...|.+.+
T Consensus 141 ~~~~~~~~~~~~l~~l~~~a~~-~gv~l~lEn~~~~~~~~~~~~~~~~---~l~~~v~~~~v 198 (309)
T 2hk0_A 141 DKAGDYARGVEGINGIADFAND-LGINLCIEVLNRFENHVLNTAAEGV---AFVKDVGKNNV 198 (309)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-TTCEEEEECCCTTTCSSCCSHHHHH---HHHHHHTCTTE
T ss_pred ChHHHHHHHHHHHHHHHHHHHH-cCCEEEEeecccccccccCCHHHHH---HHHHHcCCCCe
Confidence 1244555666666665543 3589999985 344555543 44444454433
No 258
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=52.69 E-value=62 Score=28.46 Aligned_cols=80 Identities=8% Similarity=-0.001 Sum_probs=56.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
|..+.+.-+.+++.+++.|.+-|++=+ | ++.+.-.+=++++++++++ -+.+.+....--+.++..+.++...
T Consensus 142 ~~~~~e~~~~~a~~~~~~G~~~iKiK~--G----~~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~~~~a~~~~~~l~ 213 (378)
T 3eez_A 142 GAKSVEETRAVIDRYRQRGYVAHSVKI--G----GDVERDIARIRDVEDIREP--GEIVLYDVNRGWTRQQALRVMRATE 213 (378)
T ss_dssp CSCCHHHHHHHHHHHHHTTCCEEEEEC--C----SCHHHHHHHHHHHTTSCCT--TCEEEEECTTCCCHHHHHHHHHHTG
T ss_pred cCCCHHHHHHHHHHHHhCCCCEEEecc--C----CCHHHHHHHHHHHHHHcCC--CceEEEECCCCCCHHHHHHHHHHhc
Confidence 455677778889999999999998744 3 2555666667777777764 3566777654447777667777667
Q ss_pred HcCCCEEEc
Q psy965 200 FAGSDFIKT 208 (214)
Q Consensus 200 ~aGaDFIKT 208 (214)
+.|. ||--
T Consensus 214 ~~~i-~iEq 221 (378)
T 3eez_A 214 DLHV-MFEQ 221 (378)
T ss_dssp GGTC-CEEC
T ss_pred cCCe-EEec
Confidence 7788 8753
No 259
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=52.36 E-value=99 Score=27.24 Aligned_cols=83 Identities=5% Similarity=-0.015 Sum_probs=59.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 119 SGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 119 ~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
.|..+.+.-+.+++.+++.|.+-+-+=+. ++.+.-.+=+++++++.++ -+.+.+....=-+.++-.+.++..
T Consensus 138 ~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g------~~~~~d~~~v~avR~a~g~--~~~L~vDaN~~w~~~~A~~~~~~l 209 (379)
T 3r0u_A 138 ISCGNVAETIQNIQNGVEANFTAIKVKTG------ADFNRDIQLLKALDNEFSK--NIKFRFDANQGWNLAQTKQFIEEI 209 (379)
T ss_dssp ECCCCHHHHHHHHHHHHHTTCCEEEEECS------SCHHHHHHHHHHHHHHCCT--TSEEEEECTTCCCHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHHHHHcCCCEEeeecC------CCHHHHHHHHHHHHHhcCC--CCeEEEeCCCCcCHHHHHHHHHHH
Confidence 35567788888999999999998876442 2455556667888888875 256777765444777777777777
Q ss_pred HH--cCCCEEEcC
Q psy965 199 MF--AGSDFIKTS 209 (214)
Q Consensus 199 ~~--aGaDFIKTS 209 (214)
.+ .|.+||--+
T Consensus 210 ~~~~~~l~~iEeP 222 (379)
T 3r0u_A 210 NKYSLNVEIIEQP 222 (379)
T ss_dssp HTSCCCEEEEECC
T ss_pred hhcCCCcEEEECC
Confidence 77 788888644
No 260
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=52.25 E-value=22 Score=30.72 Aligned_cols=67 Identities=10% Similarity=0.129 Sum_probs=38.8
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.|+++|++.|||-| |.=|. ..+.+.+-++.+... . ..+++.. +|=+ |.+++... .+.|+|||-
T Consensus 204 ~eea~eal~aGaD~I-~LDn~------~~~~~~~~v~~l~~~-~--~~v~iea-SGGI-t~~~i~~~----a~tGVD~is 267 (284)
T 1qpo_A 204 LEQLDAVLPEKPELI-LLDNF------AVWQTQTAVQRRDSR-A--PTVMLES-SGGL-SLQTAATY----AETGVDYLA 267 (284)
T ss_dssp HHHHHHHGGGCCSEE-EEETC------CHHHHHHHHHHHHHH-C--TTCEEEE-ESSC-CTTTHHHH----HHTTCSEEE
T ss_pred HHHHHHHHHcCCCEE-EECCC------CHHHHHHHHHHhhcc-C--CCeEEEE-ECCC-CHHHHHHH----HhcCCCEEE
Confidence 689999999999732 22232 223333333333321 1 1345444 4447 66777543 578999998
Q ss_pred cCC
Q psy965 208 TSG 210 (214)
Q Consensus 208 TST 210 (214)
+|.
T Consensus 268 vG~ 270 (284)
T 1qpo_A 268 VGA 270 (284)
T ss_dssp CGG
T ss_pred ECH
Confidence 775
No 261
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=52.00 E-value=54 Score=26.13 Aligned_cols=81 Identities=17% Similarity=0.199 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEe-cChhH-hhcCChhHHHHHHHHHHHHhcCCceEEEE-EeccC-CC--C-------H
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIV-IQRSL-VLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVGE-LK--T-------S 188 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~V-in~~~-l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~~-L~--t-------~ 188 (214)
.+++..+ +.+.+.|.+-|++. .+... +.+. .++.++++.+.. ..+++. +-.+. +. + .
T Consensus 14 ~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~------~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~~~~~~~~~~ 83 (278)
T 1i60_A 14 SNLKLDL---ELCEKHGYDYIEIRTMDKLPEYLKD------HSLDDLAEYFQT-HHIKPLALNALVFFNNRDEKGHNEII 83 (278)
T ss_dssp CCHHHHH---HHHHHTTCSEEEEETTTHHHHHTTS------SCHHHHHHHHHT-SSCEEEEEEEEECCSSCCHHHHHHHH
T ss_pred CCHHHHH---HHHHHhCCCEEEEccHHHHHHHhcc------CCHHHHHHHHHH-cCCCeeeeccccccccCCHHHHHHHH
Confidence 4555544 44557899999998 65321 1111 233344444433 234443 33321 32 2 2
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 189 ENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+.+.++.++|...|+++|.+.+|+
T Consensus 84 ~~~~~~i~~a~~lG~~~v~~~~g~ 107 (278)
T 1i60_A 84 TEFKGMMETCKTLGVKYVVAVPLV 107 (278)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCB
T ss_pred HHHHHHHHHHHHcCCCEEEEecCC
Confidence 456778889999999999986664
No 262
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=51.94 E-value=94 Score=27.29 Aligned_cols=85 Identities=6% Similarity=0.008 Sum_probs=56.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecC----hhHh-hc--------CChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQ----RSLV-LN--------NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 189 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin----~~~l-~s--------g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e 189 (214)
+.+.-..+++.+++.|.+-+.+=+- .|.. .+ .+.+...+=++++++++++ -+.+++....--+.+
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~--d~~l~vDan~~~~~~ 229 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGP--DVDIIAEMHAFTDTT 229 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCC--CCEEEEECCCCCCHH
Confidence 5676778999999999999886331 1211 00 0123444557778888875 356667754333777
Q ss_pred HHHHHHHHHHHcCCCEEEcC
Q psy965 190 NIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 190 ~i~~A~~ia~~aGaDFIKTS 209 (214)
+..+.++...+.|.+||--+
T Consensus 230 ~a~~~~~~l~~~~i~~iE~P 249 (407)
T 2o56_A 230 SAIQFGRMIEELGIFYYEEP 249 (407)
T ss_dssp HHHHHHHHHGGGCCSCEECS
T ss_pred HHHHHHHHHHhcCCCEEeCC
Confidence 77777777788899998644
No 263
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=51.90 E-value=17 Score=28.94 Aligned_cols=70 Identities=17% Similarity=0.152 Sum_probs=38.0
Q ss_pred HHHHHHHHHCCCCEEEEec-ChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 128 LHEIELLAKQKVDEVDIVI-QRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vi-n~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
...++.+.+.|++-+-+++ + |.+. .+...-.+.++++++.++ .++.+-+=+. +.++ ..+.+.++|+|+|
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~d-g~~~-~~~~~g~~~i~~i~~~~~--~~~~v~l~v~---d~~~---~i~~~~~~gad~v 88 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMD-GQFV-PNISFGADVVASMRKHSK--LVFDCHLMVV---DPER---YVEAFAQAGADIM 88 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEB-SSSS-SCBCBCHHHHHHHHTTCC--SEEEEEEESS---SGGG---GHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEEeec-CCCC-CccccCHHHHHHHHHhCC--CCEEEEEeec---CHHH---HHHHHHHcCCCEE
Confidence 4567778888999866552 2 2110 122222567777777663 2333322211 2222 2367788899998
Q ss_pred E
Q psy965 207 K 207 (214)
Q Consensus 207 K 207 (214)
-
T Consensus 89 ~ 89 (220)
T 2fli_A 89 T 89 (220)
T ss_dssp E
T ss_pred E
Confidence 4
No 264
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=51.70 E-value=85 Score=27.03 Aligned_cols=81 Identities=12% Similarity=0.135 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHh---cCCceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKC---GEKIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~---~~~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
..+.-+..+++.++.|||-||+=---..=- ...-...+|+..+.-.. .. ..+.+=+.|- . -++ .+.|.
T Consensus 28 ~~~~a~~~a~~m~~~GAdiIDIGgeSTRPg-a~~vs~eeE~~Rv~pvi~~l~~-~~v~iSIDT~---~-~~V---a~~al 98 (270)
T 4hb7_A 28 NVETAINRVKAMIDEGADIIDVGGVSTRPG-HEMVTLEEELNRVLPVVEAIVG-FDVKISVDTF---R-SEV---AEACL 98 (270)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCCCSTT-CCCCCHHHHHHHHHHHHHHHTT-SSSEEEEECS---C-HHH---HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCC-CCCCchHHHHHHHHHHHHHhhc-CCCeEEEECC---C-HHH---HHHHH
Confidence 345667889999999999999842100000 12234556666655433 22 2233344443 2 233 56677
Q ss_pred HcCCCEEEc-CCCC
Q psy965 200 FAGSDFIKT-SGSI 212 (214)
Q Consensus 200 ~aGaDFIKT-STGf 212 (214)
++|||.|.- |.|+
T Consensus 99 ~aGa~iINDVs~g~ 112 (270)
T 4hb7_A 99 KLGVDMINDQWAGL 112 (270)
T ss_dssp HHTCCEEEETTTTS
T ss_pred Hhccceeccccccc
Confidence 899999995 4454
No 265
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=51.64 E-value=58 Score=28.87 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=57.9
Q ss_pred CCCCeEEEecCCCCCC---CCHHH-------HHHHHHHH--HHCCCCEEEEecC--hhHh---hcCCh----hHHHHHHH
Q psy965 106 VYQPCLSQPAGFPSGQ---YLLET-------RLHEIELL--AKQKVDEVDIVIQ--RSLV---LNNQW----PELFSEVK 164 (214)
Q Consensus 106 s~v~vatV~igFP~G~---~~~~~-------K~~E~~~A--i~~GAdEID~Vin--~~~l---~sg~~----~~v~~Ei~ 164 (214)
.++++-.-++-||.+. ...+. -..-+|.+ .+.|||=+=+-.. ..++ ..|+. ++..+.++
T Consensus 159 ~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~ 238 (332)
T 3iv3_A 159 EDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFR 238 (332)
T ss_dssp HTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHH
T ss_pred cCCceEEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHH
Confidence 5677666436888753 22222 34455666 5779988766643 3323 22322 33444466
Q ss_pred HHHHHhcCCceEEEE-EeccCCCCHHHHHHHHHHHHHcCCCE
Q psy965 165 QMKEKCGEKIHMKTI-LAVGELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 165 ~v~~a~~~~~~lKvI-lEt~~L~t~e~i~~A~~ia~~aGaDF 205 (214)
++.++|+ +-+| |--| - ++++..+..+.|+++|+.|
T Consensus 239 ~~~~a~~----~P~v~lsgG-~-~~~~fl~~v~~A~~aGa~f 274 (332)
T 3iv3_A 239 EQEASTD----LPYIYLSAG-V-SAELFQETLVFAHKAGAKF 274 (332)
T ss_dssp HHHHTCS----SCEEEECTT-C-CHHHHHHHHHHHHHHTCCC
T ss_pred HHHhcCC----CCEEEECCC-C-CHHHHHHHHHHHHHcCCCc
Confidence 6666654 4544 6667 3 6788899999999999966
No 266
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=51.21 E-value=60 Score=26.34 Aligned_cols=109 Identities=9% Similarity=-0.038 Sum_probs=61.0
Q ss_pred cccHHHHHHhhhcCCCCCCeEEEecCCCC----CCCCHHHH-------HHHHHHHHHCCCCEEEEecChhH---hh----
Q psy965 91 VSTVWHGSDNLKTKLVYQPCLSQPAGFPS----GQYLLETR-------LHEIELLAKQKVDEVDIVIQRSL---VL---- 152 (214)
Q Consensus 91 P~~V~~a~~~L~~~gs~v~vatV~igFP~----G~~~~~~K-------~~E~~~Ai~~GAdEID~Vin~~~---l~---- 152 (214)
+..++..++.++ ..++++.++ .++|. +....+.+ ..-++.|-+.|++-+=+++.-+. +.
T Consensus 46 ~~~~~~~~~~l~--~~gl~i~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~ 122 (294)
T 3vni_A 46 DIQINELKACAH--GNGITLTVG-HGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTID 122 (294)
T ss_dssp HHHHHHHHHHHH--HTTCEEEEE-ECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCC
T ss_pred HHHHHHHHHHHH--HcCCeEEEe-ecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCC
Confidence 345666777777 467888775 46543 22222221 12466777789998754443221 11
Q ss_pred -cCChhHHHHHHHHHHHHhcCCceEEEEEecc------CCCCHHHHHHHHHHHHHcCCCEE
Q psy965 153 -NNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 153 -sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~------~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
...|+.+.+-++.+.+.+.. .-+++-+|+- .+.+.++.. +++...|.+.+
T Consensus 123 ~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lEn~~~~~~~~~~~~~~~~---~l~~~v~~~~v 179 (294)
T 3vni_A 123 KKGDWERSVESVREVAKVAEA-CGVDFCLEVLNRFENYLINTAQEGV---DFVKQVDHNNV 179 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTCEEEEECCCTTTCSSCCSHHHHH---HHHHHHCCTTE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCEEEEEecCcccCcccCCHHHHH---HHHHHcCCCCE
Confidence 12355666667777766654 4589999974 344555543 44444454443
No 267
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=51.20 E-value=18 Score=29.40 Aligned_cols=67 Identities=7% Similarity=0.067 Sum_probs=36.0
Q ss_pred HHHHHHHHHHCCCCEEEEecChhHhhcCC----hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 127 RLHEIELLAKQKVDEVDIVIQRSLVLNNQ----WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~Vin~~~l~sg~----~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
-..+++.+.+.|+|-|-+.+ +.|. ...-.+.++++++.++....+-+++... ++ -.+.+.++|
T Consensus 21 l~~~i~~~~~~Gad~i~l~i-----~Dg~fv~~~~~~~~~~~~lr~~~~~~~~v~lmv~d~-----~~---~i~~~~~ag 87 (228)
T 1h1y_A 21 LAAEADRMVRLGADWLHMDI-----MDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNP-----SD---YVEPLAKAG 87 (228)
T ss_dssp HHHHHHHHHHTTCSEEEEEE-----EBSSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSCG-----GG---GHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEEEE-----ecCCcCcchhhCHHHHHHHHhhcCCcEEEEEEecCH-----HH---HHHHHHHcC
Confidence 34578888899999543332 1121 1122367777777763212222444322 21 145566689
Q ss_pred CCEE
Q psy965 203 SDFI 206 (214)
Q Consensus 203 aDFI 206 (214)
+|+|
T Consensus 88 ad~v 91 (228)
T 1h1y_A 88 ASGF 91 (228)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 9998
No 268
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=51.19 E-value=1.1e+02 Score=27.30 Aligned_cols=87 Identities=5% Similarity=-0.096 Sum_probs=58.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhH-hhcC------ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSL-VLNN------QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~-l~sg------~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
..+.+.-+.+++.+++.|.+-+-+=+-... -..| +.+.-.+=++++++++|+ -+.+++....=-+.++..+
T Consensus 142 ~~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~--d~~l~vDaN~~~~~~~A~~ 219 (412)
T 4e4u_A 142 YDDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGS--KADLLFGTHGQMVPSSAIR 219 (412)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTT--SSEEEECCCSCBCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHH
Confidence 457788888999999999999887321100 0001 134455567788888875 3566676654447787778
Q ss_pred HHHHHHHcCCCEEEcC
Q psy965 194 ASMTAMFAGSDFIKTS 209 (214)
Q Consensus 194 A~~ia~~aGaDFIKTS 209 (214)
.++...+.|.+||--+
T Consensus 220 ~~~~L~~~~i~~iEeP 235 (412)
T 4e4u_A 220 LAKRLEKYDPLWFEEP 235 (412)
T ss_dssp HHHHHGGGCCSEEECC
T ss_pred HHHHhhhcCCcEEECC
Confidence 8888888999999754
No 269
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=51.06 E-value=1.4e+02 Score=26.74 Aligned_cols=77 Identities=6% Similarity=0.028 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCC
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 204 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaD 204 (214)
+.-..+++.+++.|.+-+.+= .+. +.+...+=++++++++++. +++.+....--+.++..+.++...+.|.+
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik--~g~----~~~~d~e~v~avR~avG~d--~~l~vDan~~~~~~eai~~~~~L~~~~i~ 258 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLR--IGD----AARVDIERVRHVRKVLGDE--VDILTDANTAYTMADARRVLPVLAEIQAG 258 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEE--CCS----CHHHHHHHHHHHHHHHCTT--SEEEEECTTCCCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHCCCCEEEEC--CCC----CHHHHHHHHHHHHHhcCCC--CEEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 556778999999999998862 221 4566667788889888752 45566654333777777777788889999
Q ss_pred EEEcC
Q psy965 205 FIKTS 209 (214)
Q Consensus 205 FIKTS 209 (214)
||--+
T Consensus 259 ~iEqP 263 (428)
T 3bjs_A 259 WLEEP 263 (428)
T ss_dssp CEECC
T ss_pred EEECC
Confidence 98754
No 270
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=51.00 E-value=17 Score=29.77 Aligned_cols=57 Identities=11% Similarity=0.035 Sum_probs=34.9
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.+++.|++.|||=+ . +|..+ .++...+...+ +..|+. -. |.+++.+ |.++|+||||-
T Consensus 79 d~~~~A~~aGAd~v---~------~p~~d---~~v~~~~~~~g----~~~i~G--~~-t~~e~~~----A~~~Gad~v~~ 135 (214)
T 1wbh_A 79 QQLAEVTEAGAQFA---I------SPGLT---EPLLKAATEGT----IPLIPG--IS-TVSELML----GMDYGLKEFKF 135 (214)
T ss_dssp HHHHHHHHHTCSCE---E------ESSCC---HHHHHHHHHSS----SCEEEE--ES-SHHHHHH----HHHTTCCEEEE
T ss_pred HHHHHHHHcCCCEE---E------cCCCC---HHHHHHHHHhC----CCEEEe--cC-CHHHHHH----HHHCCCCEEEE
Confidence 79999999999854 2 33322 23333333333 344554 33 6777754 46889999984
No 271
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=50.79 E-value=96 Score=26.64 Aligned_cols=92 Identities=10% Similarity=-0.087 Sum_probs=61.9
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
..++|.+- + |. .+..-+..++.|.+.|||-+=++.++ + ....-+.+++-.++|.++++-+..+-=+ ...|
T Consensus 80 grvpViaG-v----g~-~t~~ai~la~~A~~~Gadavlv~~P~-y-~~~s~~~l~~~f~~va~a~~lPiilYn~--g~~l 149 (316)
T 3e96_A 80 GRALVVAG-I----GY-ATSTAIELGNAAKAAGADAVMIHMPI-H-PYVTAGGVYAYFRDIIEALDFPSLVYFK--DPEI 149 (316)
T ss_dssp TSSEEEEE-E----CS-SHHHHHHHHHHHHHHTCSEEEECCCC-C-SCCCHHHHHHHHHHHHHHHTSCEEEEEC--CTTS
T ss_pred CCCcEEEE-e----Cc-CHHHHHHHHHHHHhcCCCEEEEcCCC-C-CCCCHHHHHHHHHHHHHhCCCCEEEEeC--CCCC
Confidence 45665544 3 44 67888889999999999999776555 2 3346788999999999988632322222 3346
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 186 KTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+.+.+.+. +..-..-.||=|+|
T Consensus 150 -~~~~~~~L---a~~pnIvgiKdssg 171 (316)
T 3e96_A 150 -SDRVLVDL---APLQNLVGVKYAIN 171 (316)
T ss_dssp -CTHHHHHH---TTCTTEEEEEECCC
T ss_pred -CHHHHHHH---HcCCCEEEEEeCCC
Confidence 55666544 33356778888876
No 272
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=50.70 E-value=1.1e+02 Score=26.94 Aligned_cols=91 Identities=13% Similarity=-0.025 Sum_probs=56.0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEE---ec-Ch-hHhhcC---ChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDI---VI-QR-SLVLNN---QWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~---Vi-n~-~~l~sg---~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
++.|+|+...+.-..-++..++.||.-|=+ +. .+ |.+-.+ ..+...+=|++++++... ..++++==|..+.
T Consensus 106 aD~d~Gyg~~~~v~~tv~~l~~aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~-~~~~I~ARtda~a 184 (318)
T 1zlp_A 106 VDGDTGGGGPLNVQRFIRELISAGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGD-SDFFLVARTDARA 184 (318)
T ss_dssp EECTTCSSSHHHHHHHHHHHHHTTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTT-SCCEEEEEECTHH
T ss_pred EeCCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhccc-CCcEEEEeeHHhh
Confidence 699999877776677788888999987643 21 10 111111 123555677788877643 3477777666542
Q ss_pred C--HHHHHHHHHHHHHcCCCEE
Q psy965 187 T--SENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 187 t--~e~i~~A~~ia~~aGaDFI 206 (214)
. .++..+=++...+||||-|
T Consensus 185 ~~gl~~ai~Ra~Ay~eAGAd~i 206 (318)
T 1zlp_A 185 PHGLEEGIRRANLYKEAGADAT 206 (318)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEE
T ss_pred hcCHHHHHHHHHHHHHcCCCEE
Confidence 1 1334344467788999976
No 273
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=50.48 E-value=78 Score=29.08 Aligned_cols=86 Identities=15% Similarity=0.151 Sum_probs=57.1
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE------
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL------ 180 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl------ 180 (214)
..+||.. +.+| +.+.-+.+++.+.+.|||-|++-+|+- . +++. .++++.++..++ +.+|+
T Consensus 4 ~~~icv~-l~~~----~~~~~~~~~~~~~~~g~D~vElRvD~l--~--~~~~-~~~l~~l~~~~~----~PiI~T~R~~~ 69 (523)
T 2o7s_A 4 PSLICAP-VMAD----SIDKMVIETSKAHELGADLVEIRLDWL--K--DFNP-LEDLKTIIKKSP----LPTLFTYRPKW 69 (523)
T ss_dssp CCEEEEE-ECCS----SHHHHHHHHHHHHHHTCSEEEEEGGGC--S--SCCH-HHHHHHHHHHCS----SCEEEECCBGG
T ss_pred CCEEEEE-ecCC----CHHHHHHHHHHhhhcCCCEEEEEEecc--c--ccCh-HHHHHHHHhcCC----CcEEEEecccc
Confidence 3467777 4554 566667889999999999999999962 2 2322 356777765443 23343
Q ss_pred eccCCC-CHHHHHHHHHHHHHcCCCEE
Q psy965 181 AVGELK-TSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 181 Et~~L~-t~e~i~~A~~ia~~aGaDFI 206 (214)
|-|... ++++-.+.-+.+++.|+|||
T Consensus 70 eGG~~~~~~~~~~~ll~~~~~~~~~yi 96 (523)
T 2o7s_A 70 EGGQYEGDENERRDVLRLAMELGADYI 96 (523)
T ss_dssp GTSSBCSCHHHHHHHHHHHHHHTCSEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 555432 34555667788889999997
No 274
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=50.11 E-value=44 Score=29.11 Aligned_cols=77 Identities=6% Similarity=0.071 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC---CceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE---KIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~---~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
..+.=+..+++.++.||+-||+=.... .-...+|+..+...... ...+-+-|.|..- + + .+.|.
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~------~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~---~-V---~eaaL 101 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDG------LLDARTEMTTFLNLIMSEPEIARVPVMIDSSKW---E-V---IEAGL 101 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCT------TSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCH---H-H---HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC------CCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCH---H-H---HHHHH
Confidence 346667889999999999999976321 11234566655554431 0124456666522 2 2 33444
Q ss_pred H--cCCCEEEcCCCC
Q psy965 200 F--AGSDFIKTSGSI 212 (214)
Q Consensus 200 ~--aGaDFIKTSTGf 212 (214)
+ +|++.|..=+|+
T Consensus 102 ~~~~Ga~iINdIs~~ 116 (300)
T 3k13_A 102 KCLQGKSIVNSISLK 116 (300)
T ss_dssp HHCSSCCEEEEECST
T ss_pred HhcCCCCEEEeCCcc
Confidence 4 799988876665
No 275
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=49.93 E-value=83 Score=27.36 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=59.9
Q ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHh---cCCceEEEEEeccCCC
Q psy965 110 CLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKC---GEKIHMKTILAVGELK 186 (214)
Q Consensus 110 vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~---~~~~~lKvIlEt~~L~ 186 (214)
+--|+ ++.|..+.+.+..-++.|.+.|||=|=- +.|+--.| .-.++++.|++.+ +. .++|...=| ..
T Consensus 175 ~lKVI--lEt~~Lt~eei~~A~~ia~eaGADfVKT--STGf~~~G---AT~edv~lmr~~v~~~g~--~v~VKAAGG-Ir 244 (288)
T 3oa3_A 175 ILKVI--LETSQLTADEIIAGCVLSSLAGADYVKT--STGFNGPG---ASIENVSLMSAVCDSLQS--ETRVKASGG-IR 244 (288)
T ss_dssp EEEEE--CCGGGCCHHHHHHHHHHHHHTTCSEEEC--CCSSSSCC---CCHHHHHHHHHHHHHSSS--CCEEEEESS-CC
T ss_pred CceEE--EECCCCCHHHHHHHHHHHHHcCCCEEEc--CCCCCCCC---CCHHHHHHHHHHHHHhCC--CceEEEeCC-CC
Confidence 44553 7888889999999999999999986433 23332222 2233555666555 43 578888877 55
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
|.++.. ..+++||+-|=||.|.
T Consensus 245 t~edAl----~mi~aGA~RiGtS~g~ 266 (288)
T 3oa3_A 245 TIEDCV----KMVRAGAERLGASAGV 266 (288)
T ss_dssp SHHHHH----HHHHTTCSEEEESCHH
T ss_pred CHHHHH----HHHHcCCceeehhhHH
Confidence 765543 4456999999999874
No 276
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=49.61 E-value=93 Score=26.56 Aligned_cols=93 Identities=10% Similarity=0.058 Sum_probs=64.4
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- -|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.+++++ +-+|| .
T Consensus 79 grvpViaG-----vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~~---lPiilYn~P~ 148 (303)
T 2wkj_A 79 GKIKLIAH-----VGCVSTAESQQLAASAKRYGFDAVSAVTPF-YYP-FSFEEHCDHYRAIIDSADG---LPMVVYNIPA 148 (303)
T ss_dssp TTSEEEEE-----CCCSSHHHHHHHHHHHHHHTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHHTT---CCEEEEECHH
T ss_pred CCCcEEEe-----cCCCCHHHHHHHHHHHHhCCCCEEEecCCC-CCC-CCHHHHHHHHHHHHHhCCC---CCEEEEeCcc
Confidence 35665544 267788888899999999999999777654 344 3678899999999988763 23333 3
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ .-..-.||=|+|
T Consensus 149 ~tg~~l~~~~~~~La~---~pnIvgiK~s~g 176 (303)
T 2wkj_A 149 LSGVKLTLDQINTLVT---LPGVGALXQTSG 176 (303)
T ss_dssp HHCCCCCHHHHHHHHT---STTEEEEEECCC
T ss_pred ccCCCCCHHHHHHHhc---CCCEEEEeCCCC
Confidence 454226677765543 356778888877
No 277
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=49.61 E-value=15 Score=30.42 Aligned_cols=57 Identities=11% Similarity=0.031 Sum_probs=35.4
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.+++.|++.|||=+ + +|..+ .++...+...+ +..|+. -. |.+|+.+ |.++|+||||-
T Consensus 89 d~~~~A~~aGAd~v--~-------~p~~d---~~v~~~~~~~g----~~~i~G--~~-t~~e~~~----A~~~Gad~vk~ 145 (225)
T 1mxs_A 89 SMFAAVEAAGAQFV--V-------TPGIT---EDILEAGVDSE----IPLLPG--IS-TPSEIMM----GYALGYRRFKL 145 (225)
T ss_dssp HHHHHHHHHTCSSE--E-------CSSCC---HHHHHHHHHCS----SCEECE--EC-SHHHHHH----HHTTTCCEEEE
T ss_pred HHHHHHHHCCCCEE--E-------eCCCC---HHHHHHHHHhC----CCEEEe--eC-CHHHHHH----HHHCCCCEEEE
Confidence 78999999999875 2 33332 24433333333 344554 23 6677644 55899999984
No 278
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=49.43 E-value=79 Score=27.15 Aligned_cols=84 Identities=15% Similarity=0.063 Sum_probs=59.9
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e----ccCCCCHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A----VGELKTSENIYCA 194 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E----t~~L~t~e~i~~A 194 (214)
|...+..-+..++.|.+.|||-+=++.++ . + ..-+.+++-.++|.+++++. +-+|| . ||.--+.+.+.
T Consensus 84 g~~~t~~ai~la~~A~~~Gadavlv~~P~-~-~-~s~~~l~~~f~~va~a~~~~--lPiilYn~P~~tg~~l~~~~~~-- 156 (313)
T 3dz1_A 84 SAPGFAAMRRLARLSMDAGAAGVMIAPPP-S-L-RTDEQITTYFRQATEAIGDD--VPWVLQDYPLTLSVVMTPKVIR-- 156 (313)
T ss_dssp CCSSHHHHHHHHHHHHHHTCSEEEECCCT-T-C-CSHHHHHHHHHHHHHHHCTT--SCEEEEECHHHHCCCCCHHHHH--
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCC-C-C-CCHHHHHHHHHHHHHhCCCC--CcEEEEeCccccCcCCCHHHHH--
Confidence 77788888999999999999999777666 3 3 46789999999999988721 23444 2 45433666564
Q ss_pred HHHHHH-cCCCEEE-cCCC
Q psy965 195 SMTAMF-AGSDFIK-TSGS 211 (214)
Q Consensus 195 ~~ia~~-aGaDFIK-TSTG 211 (214)
+++.+ -..-.|| ||+|
T Consensus 157 -~La~~~pnIvgiKd~~~~ 174 (313)
T 3dz1_A 157 -QIVMDSASCVMLKHEDWP 174 (313)
T ss_dssp -HHHHHCSSEEEEEECCSS
T ss_pred -HHHHhCCCEEEEEcCCCC
Confidence 44433 5777899 6665
No 279
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=49.32 E-value=20 Score=30.12 Aligned_cols=86 Identities=6% Similarity=-0.196 Sum_probs=50.5
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCCCH---HH----HHHHHHHHHHCCCCEEEEecChhH--hhcCChhHHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLL---ET----RLHEIELLAKQKVDEVDIVIQRSL--VLNNQWPELFSEV 163 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~---~~----K~~E~~~Ai~~GAdEID~Vin~~~--l~sg~~~~v~~Ei 163 (214)
.+...++.|+ ..+++++++-.+||.+.... +. =...++.|-+.|+.-|=+ .... ....+|+.+.+-+
T Consensus 77 ~~~~l~~~l~--~~GL~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~~~v~~--~~~~~~~~~~~~~~~~~~l 152 (305)
T 3obe_A 77 ASKDYKKMVD--DAGLRISSSHLTPSLREYTKENMPKFDEFWKKATDIHAELGVSCMVQ--PSLPRIENEDDAKVVSEIF 152 (305)
T ss_dssp CHHHHHHHHH--HTTCEEEEEBCCCSCCCCCGGGHHHHHHHHHHHHHHHHHHTCSEEEE--CCCCCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHH--HCCCeEEEeeccccccccchhhHHHHHHHHHHHHHHHHHcCCCEEEe--CCCCCCCCHHHHHHHHHHH
Confidence 6677777887 47888777633443331111 11 123456677789997542 2110 1112466677777
Q ss_pred HHHHHHhcCCceEEEEEecc
Q psy965 164 KQMKEKCGEKIHMKTILAVG 183 (214)
Q Consensus 164 ~~v~~a~~~~~~lKvIlEt~ 183 (214)
+.+.+.+.. .-+++-+|+-
T Consensus 153 ~~l~~~a~~-~Gv~l~lEn~ 171 (305)
T 3obe_A 153 NRAGEITKK-AGILWGYHNH 171 (305)
T ss_dssp HHHHHHHHT-TTCEEEEECC
T ss_pred HHHHHHHHH-cCCEEEEecC
Confidence 777777765 4689999875
No 280
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=48.96 E-value=65 Score=28.80 Aligned_cols=75 Identities=8% Similarity=0.082 Sum_probs=49.1
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChh-HHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWP-ELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~-~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
..+++.+.+.|||-|++- |.|. ...++. .-.+-+.++++++++ .+.||..-| +.+.+.+.+|- ..|||+|
T Consensus 263 ~e~A~~a~~aGad~I~vs-~~gg-r~~~~g~~~~~~l~~v~~av~~--~ipVia~GG-I~~g~Dv~kal----alGAd~V 333 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVS-NHGA-RQLDGVPATIDVLPEIVEAVEG--KVEVFLDGG-VRKGTDVLKAL----ALGAKAV 333 (392)
T ss_dssp HHHHHHHHHTTCCEEEEC-CGGG-TSSTTCCCHHHHHHHHHHHHTT--SSEEEECSS-CCSHHHHHHHH----HTTCSEE
T ss_pred HHHHHHHHHcCCCEEEeC-CCCC-CcCCCCcChHHHHHHHHHHcCC--CCEEEEECC-CCCHHHHHHHH----HhCCCee
Confidence 467999999999999874 6553 111221 223456666766654 367888766 55878887654 3699998
Q ss_pred EcCCC
Q psy965 207 KTSGS 211 (214)
Q Consensus 207 KTSTG 211 (214)
--++.
T Consensus 334 ~iGr~ 338 (392)
T 2nzl_A 334 FVGRP 338 (392)
T ss_dssp EECHH
T ss_pred EECHH
Confidence 76543
No 281
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=48.94 E-value=58 Score=25.52 Aligned_cols=73 Identities=12% Similarity=0.162 Sum_probs=45.1
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
..+++.+.+.|+|-|=+...++--..+.. -.+.++++++.+++ +.++..-| . +.+++.+ +.++|+|+|=
T Consensus 117 ~~~~~~~~~~g~d~i~v~~g~~g~~~~~~--~~~~i~~l~~~~~~---~~i~~~gG-I-~~~~~~~----~~~~Gad~vv 185 (211)
T 3f4w_A 117 PARVRLLEEAGADMLAVHTGTDQQAAGRK--PIDDLITMLKVRRK---ARIAVAGG-I-SSQTVKD----YALLGPDVVI 185 (211)
T ss_dssp HHHHHHHHHHTCCEEEEECCHHHHHTTCC--SHHHHHHHHHHCSS---CEEEEESS-C-CTTTHHH----HHTTCCSEEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCcccccCCC--CHHHHHHHHHHcCC---CcEEEECC-C-CHHHHHH----HHHcCCCEEE
Confidence 46788999999998643322222222211 24677778876643 56677766 4 3566643 4578999987
Q ss_pred cCCC
Q psy965 208 TSGS 211 (214)
Q Consensus 208 TSTG 211 (214)
.++.
T Consensus 186 vGsa 189 (211)
T 3f4w_A 186 VGSA 189 (211)
T ss_dssp ECHH
T ss_pred ECHH
Confidence 6653
No 282
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=48.47 E-value=1.2e+02 Score=25.91 Aligned_cols=95 Identities=14% Similarity=0.169 Sum_probs=56.4
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHh---------------hcCC--hhHHHHHHHHHHH
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV---------------LNNQ--WPELFSEVKQMKE 168 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l---------------~sg~--~~~v~~Ei~~v~~ 168 (214)
.+++|..= +. .+ .+.+.-..-++.+.+.|+|-|++. |.+.- .+|. +..-.+-++++++
T Consensus 210 ~~~Pv~vK-i~--~~-~~~~~~~~~a~~l~~~Gvd~i~vs-n~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~ 284 (336)
T 1f76_A 210 KYVPIAVK-IA--PD-LSEEELIQVADSLVRHNIDGVIAT-NTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSL 284 (336)
T ss_dssp SCCCEEEE-CC--SC-CCHHHHHHHHHHHHHTTCSEEEEC-CCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHH
T ss_pred ccCceEEE-ec--CC-CCHHHHHHHHHHHHHcCCcEEEEe-CCcccccccccccccccCCCcCCchhHHHHHHHHHHHHH
Confidence 36676554 33 22 333444445788889999999865 43210 1232 2233466778887
Q ss_pred HhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 169 KCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 169 a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
++++ .+.||. +|-..+.+.+.++- ++|||+|--+|++
T Consensus 285 ~~~~--~ipVi~-~GGI~~~~da~~~l----~~GAd~V~igr~~ 321 (336)
T 1f76_A 285 ELNG--RLPIIG-VGGIDSVIAAREKI----AAGASLVQIYSGF 321 (336)
T ss_dssp HHTT--SSCEEE-ESSCCSHHHHHHHH----HHTCSEEEESHHH
T ss_pred HhCC--CCCEEE-ECCCCCHHHHHHHH----HCCCCEEEeeHHH
Confidence 7753 244554 55566877765433 4799999888774
No 283
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=48.14 E-value=85 Score=26.87 Aligned_cols=20 Identities=10% Similarity=0.076 Sum_probs=10.7
Q ss_pred HHHHHHHHCCCCEEEEecCh
Q psy965 129 HEIELLAKQKVDEVDIVIQR 148 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~ 148 (214)
..+..|.+.|||-|+..-|+
T Consensus 12 ~~a~~A~~~GAdRIELc~~L 31 (256)
T 1twd_A 12 ECALTAQQNGADRVELCAAP 31 (256)
T ss_dssp HHHHHHHHTTCSEEEECBCG
T ss_pred HHHHHHHHcCCCEEEEcCCc
Confidence 34555555566665555443
No 284
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=47.79 E-value=39 Score=27.26 Aligned_cols=79 Identities=9% Similarity=0.050 Sum_probs=41.7
Q ss_pred HHHHHHCCCCEEEEecChhH-hhcCChhHHHHHHHHHHHHhcCCceE-EEEEeccCC---CC--------HHHHHHHHHH
Q psy965 131 IELLAKQKVDEVDIVIQRSL-VLNNQWPELFSEVKQMKEKCGEKIHM-KTILAVGEL---KT--------SENIYCASMT 197 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~-l~sg~~~~v~~Ei~~v~~a~~~~~~l-KvIlEt~~L---~t--------~e~i~~A~~i 197 (214)
++.+.+.|.+-|++...-.. .....+. .+++.++++++.. .-+ .+.+-.++. .+ .+.+.++.++
T Consensus 20 ~~~~~~~G~~~vEl~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~i~~ 96 (270)
T 3aam_A 20 VEEATALGLTAFQIFAKSPRSWRPRALS--PAEVEAFRALREA-SGGLPAVIHASYLVNLGAEGELWEKSVASLADDLEK 96 (270)
T ss_dssp HHHHHHHTCSCEEEESSCTTCCSCCCCC--HHHHHHHHHHHHH-TTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCCCCcCcCCCCC--HHHHHHHHHHHHH-cCCceEEEecCcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 45667779888888432110 1111111 2345555554432 112 333333332 11 2345677788
Q ss_pred HHHcCCCEEEcCCCC
Q psy965 198 AMFAGSDFIKTSGSI 212 (214)
Q Consensus 198 a~~aGaDFIKTSTGf 212 (214)
|...|+.+|.+.+|+
T Consensus 97 a~~lGa~~vv~h~g~ 111 (270)
T 3aam_A 97 AALLGVEYVVVHPGS 111 (270)
T ss_dssp HHHHTCCEEEECCCB
T ss_pred HHHcCCCEEEECCCC
Confidence 888899999888775
No 285
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=47.76 E-value=1e+02 Score=26.05 Aligned_cols=92 Identities=13% Similarity=0.017 Sum_probs=63.8
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- -+|| .
T Consensus 72 grvpviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y~~-~~~~~l~~~f~~va~a~~l----PiilYn~P~ 140 (293)
T 1f6k_A 72 DQIALIAQ-----VGSVNLKEAVELGKYATELGYDCLSAVTPF-YYK-FSFPEIKHYYDTIIAETGS----NMIVYSIPF 140 (293)
T ss_dssp TSSEEEEE-----CCCSCHHHHHHHHHHHHHHTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHHCC----CEEEEECHH
T ss_pred CCCeEEEe-----cCCCCHHHHHHHHHHHHhcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhCCC----CEEEEECcc
Confidence 35665544 277788888999999999999999777665 344 3568888889999888753 3333 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ .-..-.||=|+|
T Consensus 141 ~tg~~l~~~~~~~La~---~pnIvgiK~s~g 168 (293)
T 1f6k_A 141 LTGVNMGIEQFGELYK---NPKVLGVKFTAG 168 (293)
T ss_dssp HHCCCCCHHHHHHHHT---STTEEEEEECSC
T ss_pred ccCcCCCHHHHHHHhc---CCCEEEEEECCC
Confidence 453226677755542 356778888876
No 286
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=47.70 E-value=1e+02 Score=26.80 Aligned_cols=82 Identities=11% Similarity=0.030 Sum_probs=56.9
Q ss_pred CCCCHHHHHHHHHHHHHC-CCCEEEEecChhHhhcCChh-HHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWP-ELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMT 197 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~-GAdEID~Vin~~~l~sg~~~-~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~i 197 (214)
|..+.+.-+.+++.+++. |.+-+-+=+.. +.. .-.+=+++++++.|+ -+.+.+....--+.++-.+.++.
T Consensus 136 ~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~------~~~~~d~~~v~avR~a~g~--~~~l~vDan~~~~~~~a~~~~~~ 207 (367)
T 3dg3_A 136 GFDDPVKMVAEAERIRETYGINTFKVKVGR------RPVQLDTAVVRALRERFGD--AIELYVDGNRGWSAAESLRAMRE 207 (367)
T ss_dssp ESSCHHHHHHHHHHHHHHHCCCEEEEECCC------SSTHHHHHHHHHHHHHHGG--GSEEEEECTTCSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhcCccEEEEeeCC------ChhhhHHHHHHHHHHHhCC--CCEEEEECCCCCCHHHHHHHHHH
Confidence 345678888899999999 99988765422 222 344567888888875 24556665544377777777777
Q ss_pred HHHcCCCEEEcC
Q psy965 198 AMFAGSDFIKTS 209 (214)
Q Consensus 198 a~~aGaDFIKTS 209 (214)
..+.|.+||--+
T Consensus 208 l~~~~i~~iEqP 219 (367)
T 3dg3_A 208 MADLDLLFAEEL 219 (367)
T ss_dssp TTTSCCSCEESC
T ss_pred HHHhCCCEEECC
Confidence 778899998654
No 287
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=47.64 E-value=1.3e+02 Score=25.49 Aligned_cols=14 Identities=29% Similarity=0.107 Sum_probs=8.0
Q ss_pred HHHHHHHHcCCCEE
Q psy965 193 CASMTAMFAGSDFI 206 (214)
Q Consensus 193 ~A~~ia~~aGaDFI 206 (214)
+-++.|.++|+|-+
T Consensus 114 ~f~~~~~~aGvdgv 127 (267)
T 3vnd_A 114 EFYTKAQAAGVDSV 127 (267)
T ss_dssp HHHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCCEE
Confidence 44556666666654
No 288
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=47.58 E-value=29 Score=27.92 Aligned_cols=72 Identities=8% Similarity=0.075 Sum_probs=37.7
Q ss_pred HHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 127 RLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
-...++.+.+.|++-|-+.+.=|.+-. +...-.+.++++++.++ .++.+-+ +..+.+ +..+.+.++|+|+|
T Consensus 25 ~~~~i~~~~~~G~d~i~l~~~dg~f~~-~~~~~~~~i~~l~~~~~--~~~~v~l---~vnd~~---~~v~~~~~~Gad~v 95 (230)
T 1rpx_A 25 LGEQVKAIEQAGCDWIHVDVMDGRFVP-NITIGPLVVDSLRPITD--LPLDVHL---MIVEPD---QRVPDFIKAGADIV 95 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEBSSSSS-CBCCCHHHHHHHGGGCC--SCEEEEE---ESSSHH---HHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHCCCCEEEEeeccCCccc-ccccCHHHHHHHHhccC--CcEEEEE---EecCHH---HHHHHHHHcCCCEE
Confidence 345677788899994444321111100 11112466777777664 2333333 232222 34566678999998
Q ss_pred E
Q psy965 207 K 207 (214)
Q Consensus 207 K 207 (214)
-
T Consensus 96 ~ 96 (230)
T 1rpx_A 96 S 96 (230)
T ss_dssp E
T ss_pred E
Confidence 3
No 289
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=47.53 E-value=1.2e+02 Score=25.30 Aligned_cols=76 Identities=14% Similarity=0.160 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHHCC-CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC---CHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQK-VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK---TSENIYCASMTA 198 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~G-AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~---t~e~i~~A~~ia 198 (214)
+-+.+....+.+++.| +|-||+=+... +.+ +.++.+.++. ...|+|+-.-.+. +.+++..-..-+
T Consensus 97 ~~~~~~~ll~~~~~~~~~d~iDvEl~~~-------~~~---~~~l~~~a~~-~~~kiI~S~Hdf~~TP~~~el~~~~~~~ 165 (258)
T 4h3d_A 97 SRDYYTTLNKEISNTGLVDLIDVELFMG-------DEV---IDEVVNFAHK-KEVKVIISNHDFNKTPKKEEIVSRLCRM 165 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEGGGC-------HHH---HHHHHHHHHH-TTCEEEEEEEESSCCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCchhhHHhhhcc-------HHH---HHHHHHHHHh-CCCEEEEEEecCCCCCCHHHHHHHHHHH
Confidence 3566777778888887 78888876543 223 3344444333 3579998765432 456776666667
Q ss_pred HHcCCCEEEcC
Q psy965 199 MFAGSDFIKTS 209 (214)
Q Consensus 199 ~~aGaDFIKTS 209 (214)
...|||.+|-.
T Consensus 166 ~~~gaDIvKia 176 (258)
T 4h3d_A 166 QELGADLPKIA 176 (258)
T ss_dssp HHTTCSEEEEE
T ss_pred HHhCCCEEEEE
Confidence 78899999943
No 290
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=47.53 E-value=1.2e+02 Score=24.95 Aligned_cols=134 Identities=9% Similarity=-0.038 Sum_probs=75.1
Q ss_pred HHHHHHhhhhhcccCC---CCC---------CCHHHHHHHHHHhhccCchhhhcccccc---CcccHHHHHHhhhcCCCC
Q psy965 43 KSLLLKIIEFIDLTTL---SGD---------DTEAVVETLTLKAIQPLSEELKEKVLRG---FVSTVWHGSDNLKTKLVY 107 (214)
Q Consensus 43 ~~~l~~~~~~ID~TlL---~~~---------~T~~~I~~lc~eA~~~f~~~~~~~~~cv---~P~~V~~a~~~L~~~gs~ 107 (214)
.+.++++.+..|.-.+ +.+ .+.++++.+.+.-...+ ...+. .|..+....+..++ .+
T Consensus 58 ~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V------~l~~~~~~~p~~l~~~i~~~~~--~g 129 (232)
T 3igs_A 58 IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAII------AVDGTARQRPVAVEALLARIHH--HH 129 (232)
T ss_dssp HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE------EEECCSSCCSSCHHHHHHHHHH--TT
T ss_pred HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEE------EECccccCCHHHHHHHHHHHHH--CC
Confidence 4556666666665544 221 36678877755443210 01122 57777777776663 34
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhH-----hhcCChhHHHHHHHHHHHHhcCCceEEEEEec
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSL-----VLNNQWPELFSEVKQMKEKCGEKIHMKTILAV 182 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~-----l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt 182 (214)
+.+.+- +. + ..|++.+.+.|||.| .+-+++. ....+| +-++++++. .+.||-|-
T Consensus 130 ~~v~~~-v~------t----~eea~~a~~~Gad~I-g~~~~g~t~~~~~~~~~~----~~i~~l~~~-----~ipvIA~G 188 (232)
T 3igs_A 130 LLTMAD-CS------S----VDDGLACQRLGADII-GTTMSGYTTPDTPEEPDL----PLVKALHDA-----GCRVIAEG 188 (232)
T ss_dssp CEEEEE-CC------S----HHHHHHHHHTTCSEE-ECTTTTSSSSSCCSSCCH----HHHHHHHHT-----TCCEEEES
T ss_pred CEEEEe-CC------C----HHHHHHHHhCCCCEE-EEcCccCCCCCCCCCCCH----HHHHHHHhc-----CCcEEEEC
Confidence 444433 21 1 478999999999987 2223332 112233 334445543 25678787
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 183 GELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 183 ~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
| ..|.+++.++ +++|+|.|=-+|
T Consensus 189 G-I~t~~d~~~~----~~~GadgV~VGs 211 (232)
T 3igs_A 189 R-YNSPALAAEA----IRYGAWAVTVGS 211 (232)
T ss_dssp C-CCSHHHHHHH----HHTTCSEEEECH
T ss_pred C-CCCHHHHHHH----HHcCCCEEEEeh
Confidence 7 5488888654 466999875543
No 291
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=47.33 E-value=47 Score=26.99 Aligned_cols=106 Identities=8% Similarity=0.036 Sum_probs=60.3
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCC---C----------CCCCH-------HHHHHHHHHHHHCCCCEEEEecChhHh
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFP---S----------GQYLL-------ETRLHEIELLAKQKVDEVDIVIQRSLV 151 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP---~----------G~~~~-------~~K~~E~~~Ai~~GAdEID~Vin~~~l 151 (214)
..+...++.++ ..++++.++..+|| + |.... +.=..-++.|-+.|++-|= +..|..
T Consensus 51 ~~~~~~~~~l~--~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~a~~lG~~~v~--~~~G~~ 126 (290)
T 3tva_A 51 EHAQAFRAKCD--AAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMKEISDFASWVGCPAIG--LHIGFV 126 (290)
T ss_dssp HHHHHHHHHHH--HTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHHHHHHHHHHHTCSEEE--ECCCCC
T ss_pred HHHHHHHHHHH--HcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE--EcCCCC
Confidence 34666777777 47788877733332 1 21111 1112345666778998854 333322
Q ss_pred ---hcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 152 ---LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 152 ---~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
....|+.+.+-++.+.+.+.. .-+++-+|+.. .+.+++. ++.-..|.+.+
T Consensus 127 ~~~~~~~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~-~~~~~~~---~l~~~~~~~~~ 179 (290)
T 3tva_A 127 PESSSPDYSELVRVTQDLLTHAAN-HGQAVHLETGQ-ESADHLL---EFIEDVNRPNL 179 (290)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHT-TTCEEEEECCS-SCHHHHH---HHHHHHCCTTE
T ss_pred cccchHHHHHHHHHHHHHHHHHHH-cCCEEEEecCC-CCHHHHH---HHHHhcCCCCE
Confidence 222466677777777777755 46899999974 4655543 44444454433
No 292
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=47.20 E-value=87 Score=26.96 Aligned_cols=102 Identities=14% Similarity=0.074 Sum_probs=56.1
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCC----CHH-HHHHH-HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQY----LLE-TRLHE-IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQM 166 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~----~~~-~K~~E-~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v 166 (214)
.+..+.+..+ ..++++-.- -||.|.. ... ..+.+ ++.+.+.|||-+= +.++..-.|.++.+.+-++..
T Consensus 143 ~i~~v~~~~~--~~G~p~lv~--~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iK--v~~~~~~~g~~~~~~~vv~~~ 216 (304)
T 1to3_A 143 MVKEFNELCH--SNGLLSIIE--PVVRPPRCGDKFDREQAIIDAAKELGDSGADLYK--VEMPLYGKGARSDLLTASQRL 216 (304)
T ss_dssp HHHHHHHHHH--TTTCEEEEE--EEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEE--ECCGGGGCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHH--HcCCcEEEE--EECCCCccccCCChhHHHHHHHHHHHHcCCCEEE--eCCCcCCCCCHHHHHHHHHhc
Confidence 3444444444 356665444 2443332 222 44555 8999999996322 333222335666655555544
Q ss_pred HHHhcCCceEE-EEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 167 KEKCGEKIHMK-TILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 167 ~~a~~~~~~lK-vIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
...|+ +. |++--| . +.++.......++++|++-+
T Consensus 217 ~~~~~----~P~Vv~aGG-~-~~~~~~~~~~~a~~aGa~Gv 251 (304)
T 1to3_A 217 NGHIN----MPWVILSSG-V-DEKLFPRAVRVAMEAGASGF 251 (304)
T ss_dssp HHTCC----SCEEECCTT-S-CTTTHHHHHHHHHHTTCCEE
T ss_pred cccCC----CCeEEEecC-C-CHHHHHHHHHHHHHcCCeEE
Confidence 43354 34 555555 4 55666677777889999765
No 293
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=47.08 E-value=1.3e+02 Score=27.40 Aligned_cols=26 Identities=15% Similarity=-0.015 Sum_probs=20.9
Q ss_pred cCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 183 GELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 183 ~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+.+ +++++...++.+.++|+|+|--+
T Consensus 306 pd~-~~ed~~~iA~~~~~aGaDgI~v~ 331 (443)
T 1tv5_A 306 PDL-NQEQKKEIADVLLETNIDGMIIS 331 (443)
T ss_dssp SCC-CHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCC-CHHHHHHHHHHHHHcCCCEEEEE
Confidence 346 66788899999999999998543
No 294
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=46.95 E-value=45 Score=29.07 Aligned_cols=83 Identities=11% Similarity=0.035 Sum_probs=54.4
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
..+.+-=+.-++.+.+.||+.|=+.=-.|.. ..+.+++-++.+++..++ .+.|+.-.=+|...-..-+..|++
T Consensus 145 ~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~---~P~~v~~lv~~l~~~~~~----~~pi~~H~Hn~~G~avAn~laA~~ 217 (345)
T 1nvm_A 145 MIPAEKLAEQGKLMESYGATCIYMADSGGAM---SMNDIRDRMRAFKAVLKP----ETQVGMHAHHNLSLGVANSIVAVE 217 (345)
T ss_dssp SSCHHHHHHHHHHHHHHTCSEEEEECTTCCC---CHHHHHHHHHHHHHHSCT----TSEEEEECBCTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCcCcc---CHHHHHHHHHHHHHhcCC----CceEEEEECCCccHHHHHHHHHHH
Confidence 4556656666778888999987665444443 477888888888887642 123444222232333455678899
Q ss_pred cCCCEEEcCC
Q psy965 201 AGSDFIKTSG 210 (214)
Q Consensus 201 aGaDFIKTST 210 (214)
+|+|.|-+|-
T Consensus 218 aGa~~vd~tv 227 (345)
T 1nvm_A 218 EGCDRVDASL 227 (345)
T ss_dssp TTCCEEEEBG
T ss_pred cCCCEEEecc
Confidence 9999999873
No 295
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=46.95 E-value=42 Score=29.24 Aligned_cols=91 Identities=13% Similarity=0.006 Sum_probs=59.9
Q ss_pred cCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGFPSGQ-YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igFP~G~-~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
.+.|.+. .+.+-=+.-++.+.+.||++|=+.=-.|. .....+++=++.+++..++ .. ++.|+.-.=+|...-..
T Consensus 140 f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~-~~-~~~i~~H~Hnd~GlA~A 214 (325)
T 3eeg_A 140 FFCEDAGRADQAFLARMVEAVIEAGADVVNIPDTTGY---MLPWQYGERIKYLMDNVSN-ID-KAILSAHCHNDLGLATA 214 (325)
T ss_dssp EEEETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSC---CCHHHHHHHHHHHHHHCSC-GG-GSEEEECBCCTTSCHHH
T ss_pred EEccccccchHHHHHHHHHHHHhcCCCEEEecCccCC---cCHHHHHHHHHHHHHhCCC-CC-ceEEEEEeCCCCCHHHH
Confidence 5777554 44554455567777889998754433343 4567788888888877653 11 24566655545444555
Q ss_pred HHHHHHHcCCCEEEcCC
Q psy965 194 ASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 194 A~~ia~~aGaDFIKTST 210 (214)
-+..|+++|++.|-+|-
T Consensus 215 N~laA~~aGa~~vd~tv 231 (325)
T 3eeg_A 215 NSLAALQNGARQVECTI 231 (325)
T ss_dssp HHHHHHHHTCCEEEEBG
T ss_pred HHHHHHHhCCCEEEEec
Confidence 67788999999999874
No 296
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=46.89 E-value=1e+02 Score=25.30 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=40.2
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.-++.+++.|++-|.+-.+ +. .-.+-|+++++..++ +.+---| .+ +.++ .++|+++|||||-
T Consensus 41 ~~~~~al~~gGv~~iel~~k-----~~---~~~~~i~~l~~~~~~---~~igagt-vl-~~d~----~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTLR-----SQ---HGLKAIQVLREQRPE---LCVGAGT-VL-DRSM----FAAVEAAGAQFVV 103 (225)
T ss_dssp HHHHHHHHHTTCCEEEEESS-----ST---HHHHHHHHHHHHCTT---SEEEEEC-CC-SHHH----HHHHHHHTCSSEE
T ss_pred HHHHHHHHHCCCCEEEEecC-----Cc---cHHHHHHHHHHhCcc---cEEeeCe-Ee-eHHH----HHHHHHCCCCEEE
Confidence 45678889999998887643 21 223345556665543 2233334 24 5444 5688999999997
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
++
T Consensus 104 ~p 105 (225)
T 1mxs_A 104 TP 105 (225)
T ss_dssp CS
T ss_pred eC
Confidence 54
No 297
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=46.82 E-value=30 Score=32.19 Aligned_cols=41 Identities=20% Similarity=0.288 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 160 FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 160 ~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.+.|+.+++..+.+..+|-+ . +.+. ++.+.++|+|+|-.|.
T Consensus 332 ~~~i~~lr~~~~~PvivKgv-----~-~~e~----A~~a~~aGad~I~vs~ 372 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGV-----Q-RTED----VIKAAEIGVSGVVLSN 372 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEE-----C-SHHH----HHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHhCCcEEEEeC-----C-CHHH----HHHHHHcCCCEEEEcC
Confidence 56788999887645778833 2 3232 5678899999998864
No 298
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=46.78 E-value=1.2e+02 Score=27.13 Aligned_cols=132 Identities=13% Similarity=0.101 Sum_probs=82.1
Q ss_pred CCCCCCHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCC-CCCCHHHHHHHHHHHHH
Q psy965 58 LSGDDTEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPS-GQYLLETRLHEIELLAK 136 (214)
Q Consensus 58 L~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~-G~~~~~~K~~E~~~Ai~ 136 (214)
|+..-...-++++++|.. +. ....+||.||.. |.+.+ --+ -+.|- =+.+.+.=+.|++++++
T Consensus 18 l~~g~~~~~~R~lv~Et~--L~-----~~dLI~PlFV~e--------g~~~~-~~I-~SMPGv~r~sid~l~~~~~~~~~ 80 (342)
T 1h7n_A 18 LAGGYNHPLLRQWQSERQ--LT-----KNMLIFPLFISD--------NPDDF-TEI-DSLPNINRIGVNRLKDYLKPLVA 80 (342)
T ss_dssp CGGGSSSHHHHHHTCSSC--CC-----GGGEEEEEEEES--------STTCE-EEC-TTSTTCEEECHHHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHhcCc--CC-----HHHceeeEEEec--------CCCCc-eeC-CCCCCceeeCHHHHHHHHHHHHH
Confidence 444445556777765533 11 234789999964 23322 122 34552 23467888899999999
Q ss_pred CCCCEEEEecCh---------hHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-----------------eccCCCCHHH
Q psy965 137 QKVDEVDIVIQR---------SLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-----------------AVGELKTSEN 190 (214)
Q Consensus 137 ~GAdEID~Vin~---------~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-----------------Et~~L~t~e~ 190 (214)
.|..-|-+-.-. |.---..-..+.+=|+++++..++ +-||- +.|+..+++-
T Consensus 81 lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pd---l~VitDvcLc~YT~HGHcGil~~~g~V~ND~T 157 (342)
T 1h7n_A 81 KGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPE---LYIICDVCLCEYTSHGHCGVLYDDGTINRERS 157 (342)
T ss_dssp TTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTT---SEEEEEECSTTTBTTCCSSCBCTTSSBCHHHH
T ss_pred CCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCC---eEEEEeeecccccCCCceeEECCCCcCccHHH
Confidence 999988773221 112223445778889999988764 23333 4566656666
Q ss_pred HHHHHHHH---HHcCCCEEEcC
Q psy965 191 IYCASMTA---MFAGSDFIKTS 209 (214)
Q Consensus 191 i~~A~~ia---~~aGaDFIKTS 209 (214)
+...++.| .+||||.|--|
T Consensus 158 l~~Lak~Als~A~AGAdiVAPS 179 (342)
T 1h7n_A 158 VSRLAAVAVNYAKAGAHCVAPS 179 (342)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCeeecc
Confidence 66666555 47999999766
No 299
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=46.65 E-value=41 Score=29.30 Aligned_cols=130 Identities=13% Similarity=-0.023 Sum_probs=77.9
Q ss_pred CCCCHHHHHHHHHHhhccCchhhhcccc--ccCcccHHHHHHhhhcCCCCCCeEEEecC-CC---CCCCCHHHHHH-HHH
Q psy965 60 GDDTEAVVETLTLKAIQPLSEELKEKVL--RGFVSTVWHGSDNLKTKLVYQPCLSQPAG-FP---SGQYLLETRLH-EIE 132 (214)
Q Consensus 60 ~~~T~~~I~~lc~eA~~~f~~~~~~~~~--cv~P~~V~~a~~~L~~~gs~v~vatV~ig-FP---~G~~~~~~K~~-E~~ 132 (214)
+......++.+++-|-.++... .-+.+ .++|. ++.-.+..+. .+|.+++- | |= .-+. ++. -.+
T Consensus 48 kglg~~~~~DlLe~ag~yID~l-Kfg~GTs~l~~~-l~ekI~l~~~--~gV~v~~G--GTlfE~~l~qg----~~~~yl~ 117 (276)
T 1u83_A 48 NGYPLQFFKDAIAGASDYIDFV-KFGWGTSLLTKD-LEEKISTLKE--HDITFFFG--GTLFEKYVSQK----KVNEFHR 117 (276)
T ss_dssp SSCCHHHHHHHHHHHGGGCCEE-EECTTGGGGCTT-HHHHHHHHHH--TTCEEEEC--HHHHHHHHHTT----CHHHHHH
T ss_pred CCCCHHHHHHHHHHhhhhcceE-EecCcchhhhHH-HHHHHHHHHH--cCCeEeCC--cHHHHHHHHcC----cHHHHHH
Confidence 4577888888888887652210 00011 44777 7777777663 56665443 2 00 0011 222 356
Q ss_pred HHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC-------CHHHHHHHHHHHHHcCCCE
Q psy965 133 LLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK-------TSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 133 ~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~-------t~e~i~~A~~ia~~aGaDF 205 (214)
+|-+.|-+-|++-- |-.+-=.++-..+.+.+.+ . +||+.|.|.=. +.++..+-.+-..+|||++
T Consensus 118 ~~k~lGF~~IEISd-------Gti~l~~~~~~~lI~~a~~-~-f~Vl~EvG~K~~~~~~~~~~~~~I~~~~~dLeAGA~~ 188 (276)
T 1u83_A 118 YCTYFGCEYIEISN-------GTLPMTNKEKAAYIADFSD-E-FLVLSEVGSKDAELASRQSSEEWLEYIVEDMEAGAEK 188 (276)
T ss_dssp HHHHTTCSEEEECC-------SSSCCCHHHHHHHHHHHTT-T-SEEEEECSCCC------CCSTHHHHHHHHHHHHTEEE
T ss_pred HHHHcCCCEEEECC-------CcccCCHHHHHHHHHHHHh-h-cEEeeeccccCccccCCCCHHHHHHHHHHHHHCCCcE
Confidence 67778999988752 2222234455545555555 4 99999987531 3467778888999999999
Q ss_pred EEc
Q psy965 206 IKT 208 (214)
Q Consensus 206 IKT 208 (214)
|=+
T Consensus 189 Vii 191 (276)
T 1u83_A 189 VIT 191 (276)
T ss_dssp EEE
T ss_pred EEE
Confidence 854
No 300
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=46.19 E-value=1.1e+02 Score=27.16 Aligned_cols=112 Identities=16% Similarity=0.033 Sum_probs=69.8
Q ss_pred ccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhc-------CChh
Q psy965 86 VLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSG-QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN-------NQWP 157 (214)
Q Consensus 86 ~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G-~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s-------g~~~ 157 (214)
...+||.||.. |.+.+ --+ -+.|-= +.+.+.=+.|++++++.|..-|-+-.-.. -|+ ..-.
T Consensus 28 ~dLI~PlFV~e--------g~~~~-~~I-~SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgvp~-~Kd~~gs~A~~~~g 96 (323)
T 1l6s_A 28 NDLVLPIFVEE--------EIDDY-KAV-EAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISH-HTDETGSDAWREDG 96 (323)
T ss_dssp GGEEEEEEEET--------TCSSC-EEC-TTSTTCEEEEGGGHHHHHHHHHHHTCCEEEEEEECS-SCBSSCGGGGSTTS
T ss_pred HHceeeEEEec--------CCCCc-ccc-CCCCCceeeCHHHHHHHHHHHHHCCCCEEEEeCCCC-CCCccccccCCCCC
Confidence 34789999964 23322 122 344522 23467778899999999999887732211 132 2335
Q ss_pred HHHHHHHHHHHHhcCC--------------ceEEEEEeccCCCCHHHHHHHHHHH---HHcCCCEEEcC
Q psy965 158 ELFSEVKQMKEKCGEK--------------IHMKTILAVGELKTSENIYCASMTA---MFAGSDFIKTS 209 (214)
Q Consensus 158 ~v~~Ei~~v~~a~~~~--------------~~lKvIlEt~~L~t~e~i~~A~~ia---~~aGaDFIKTS 209 (214)
.+.+=|+++++..++- .|.- |++.|+..+++-+...++.| .+||||.|--|
T Consensus 97 ~v~rair~iK~~~pdl~vitDvcLc~YT~HGHcG-il~~g~V~ND~Tl~~Lak~Als~A~AGAdiVAPS 164 (323)
T 1l6s_A 97 LVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCG-VLCEHGVDNDATLENLGKQAVVAAAAGADFIAPS 164 (323)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEECSTTTBSSCCSS-CBCSSSBCHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred cHHHHHHHHHHHCCCeEEEEeeeccccCCCCceE-eccCCcCccHHHHHHHHHHHHHHHHcCCCeEecc
Confidence 7778899999886540 1122 23566666667666666555 57999999766
No 301
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=46.18 E-value=71 Score=28.22 Aligned_cols=74 Identities=11% Similarity=0.223 Sum_probs=48.6
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChh-HHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWP-ELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~-~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
..+++.+.+.|||-|++- |.|. ...++. .-.+-+.++++++++ .+.||..-| +.+.+.+.++ +..|||+|
T Consensus 240 ~e~a~~a~~~Gad~I~vs-~~gg-r~~~~g~~~~~~l~~v~~~v~~--~ipVia~GG-I~~g~D~~ka----lalGAd~V 310 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVS-NHGA-RQLYEAPGSFDTLPAIAERVNK--RVPIVFDSG-VRRGEHVAKA----LASGADVV 310 (368)
T ss_dssp HHHHHHHHHTTCSEEEEC-CGGG-TSCSSCCCHHHHHHHHHHHHTT--SSCEEECSS-CCSHHHHHHH----HHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEc-CCCc-CCCCCCCChHHHHHHHHHHhCC--CCeEEEECC-CCCHHHHHHH----HHcCCCEE
Confidence 367899999999999874 6553 112221 223556777777654 356777777 5587877655 34799998
Q ss_pred EcCC
Q psy965 207 KTSG 210 (214)
Q Consensus 207 KTST 210 (214)
--++
T Consensus 311 ~iGr 314 (368)
T 2nli_A 311 ALGR 314 (368)
T ss_dssp EECH
T ss_pred EECH
Confidence 6554
No 302
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=46.09 E-value=31 Score=28.31 Aligned_cols=130 Identities=7% Similarity=-0.011 Sum_probs=72.0
Q ss_pred hhcccCCCCCCCHHHHHHHHHHhhccCchhhhcccccc----CcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHH
Q psy965 52 FIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLRG----FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETR 127 (214)
Q Consensus 52 ~ID~TlL~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv----~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K 127 (214)
++|+=+ .+.++.+.+.+.++- . .+.++ .+..+..+++.+++.|...++..| .=-|+ .+
T Consensus 62 flDlKl---~Dip~t~~~~~~~~G--a------d~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~V-t~lts--~~---- 123 (221)
T 3exr_A 62 VADTKC---ADAGGTVAKNNAVRG--A------DWMTCICSATIPTMKAARKAIEDINPDKGEIQV-ELYGD--WT---- 123 (221)
T ss_dssp EEEEEE---CSCHHHHHHHHHTTT--C------SEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEE-ECCSS--CC----
T ss_pred EEEEEe---eccHHHHHHHHHHcC--C------CEEEEeccCCHHHHHHHHHHHHhcCCCcceEEE-EEcCC--CC----
Confidence 455543 356777777654432 1 12233 334577888887654433344555 22332 12
Q ss_pred HHHHHHHHHCCCCEEEEecChhHh--hcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLV--LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l--~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDF 205 (214)
..++++.++.|+++ +|++++.. ..|.... .+|++.+++.++. .+++++.=| . +.+++. .+.++|||+
T Consensus 124 ~~~~~~~~~~~~~~--~v~~~a~~~~~~Gvv~s-~~e~~~ir~~~~~--~~~i~v~gG-I-~~~~~~----~~~~aGad~ 192 (221)
T 3exr_A 124 YDQAQQWLDAGISQ--AIYHQSRDALLAGETWG-EKDLNKVKKLIEM--GFRVSVTGG-L-SVDTLK----LFEGVDVFT 192 (221)
T ss_dssp HHHHHHHHHTTCCE--EEEECCHHHHHHTCCCC-HHHHHHHHHHHHH--TCEEEEESS-C-CGGGGG----GGTTCCCSE
T ss_pred HHHHHHHHcCCHHH--HHHHHHHhcCCCccccC-HHHHHHHHHhhcC--CceEEEECC-C-CHHHHH----HHHHCCCCE
Confidence 23344567778875 55555432 3443211 4689999998863 345555444 5 445543 578999999
Q ss_pred EEcCC
Q psy965 206 IKTSG 210 (214)
Q Consensus 206 IKTST 210 (214)
+--++
T Consensus 193 ~VvG~ 197 (221)
T 3exr_A 193 FIAGR 197 (221)
T ss_dssp EEECH
T ss_pred EEECc
Confidence 86544
No 303
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=45.88 E-value=36 Score=27.46 Aligned_cols=79 Identities=8% Similarity=0.039 Sum_probs=43.7
Q ss_pred HHHHHHCCCCEEEEec-ChhHhhcCChhHHHHHHHHHHHHhcCCceEE---EEEeccCC---CC-H--------HHHHHH
Q psy965 131 IELLAKQKVDEVDIVI-QRSLVLNNQWPELFSEVKQMKEKCGEKIHMK---TILAVGEL---KT-S--------ENIYCA 194 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vi-n~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lK---vIlEt~~L---~t-~--------e~i~~A 194 (214)
++.+.+.|.+-|++.. +.......... .+++.++++++.. .-++ +.+..++. .+ + +.+.++
T Consensus 18 l~~~~~~G~~~vEl~~~~~~~~~~~~~~--~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~ 94 (285)
T 1qtw_A 18 AIRAAEIDATAFALFTKNQRQWRAAPLT--TQTIDEFKAACEK-YHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDE 94 (285)
T ss_dssp HHHHHHTTCSEEECCSSCSSCSSCCCCC--HHHHHHHHHHHHH-TTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEeeCCCCCcCcCCCCC--HHHHHHHHHHHHH-cCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHH
Confidence 4666778999999832 11111111111 2445555555433 2344 22333322 11 1 345677
Q ss_pred HHHHHHcCCCEEEcCCCC
Q psy965 195 SMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 195 ~~ia~~aGaDFIKTSTGf 212 (214)
.++|...|+.+|...+|+
T Consensus 95 i~~A~~lGa~~v~~~~g~ 112 (285)
T 1qtw_A 95 MQRCEQLGLSLLNFHPGS 112 (285)
T ss_dssp HHHHHHTTCCEEEECCCB
T ss_pred HHHHHHcCCCEEEECcCC
Confidence 889999999999988775
No 304
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=45.55 E-value=78 Score=29.80 Aligned_cols=76 Identities=11% Similarity=0.094 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc--
Q psy965 124 LETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA-- 201 (214)
Q Consensus 124 ~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a-- 201 (214)
.+.=+..+++.++.|||-||+=+....+ ...+|+..++........+-+.|.|..- + + .+.|.++
T Consensus 339 ~~~a~~~A~~~v~~GAdiIDIgpg~~~v------~~~ee~~rvv~~i~~~~~vpisIDT~~~---~-v---~eaal~~~~ 405 (566)
T 1q7z_A 339 EEIVIKEAKTQVEKGAEVLDVNFGIESQ------IDVRYVEKIVQTLPYVSNVPLSLDIQNV---D-L---TERALRAYP 405 (566)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECSSGGG------SCHHHHHHHHHHHHHHTCSCEEEECCCH---H-H---HHHHHHHCS
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCC------CHHHHHHHHHHHHHhhCCceEEEeCCCH---H-H---HHHHHHhcC
Confidence 4666778999999999999998533211 2234444444333210124567777622 3 3 3344555
Q ss_pred CCCEEEcCCCC
Q psy965 202 GSDFIKTSGSI 212 (214)
Q Consensus 202 GaDFIKTSTGf 212 (214)
|++.|..=+|.
T Consensus 406 G~~iINdis~~ 416 (566)
T 1q7z_A 406 GRSLFNSAKVD 416 (566)
T ss_dssp SCCEEEEEESC
T ss_pred CCCEEEECCcc
Confidence 99999865654
No 305
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=45.53 E-value=56 Score=31.26 Aligned_cols=85 Identities=11% Similarity=-0.022 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHCCCCEEEEecChhHhhc-------------------CChhHHHHHHHHHHHHhcCCc--eEEEEEec--
Q psy965 126 TRLHEIELLAKQKVDEVDIVIQRSLVLN-------------------NQWPELFSEVKQMKEKCGEKI--HMKTILAV-- 182 (214)
Q Consensus 126 ~K~~E~~~Ai~~GAdEID~Vin~~~l~s-------------------g~~~~v~~Ei~~v~~a~~~~~--~lKvIlEt-- 182 (214)
.=..-++.|.+.|.|-||+=.--|+|++ ++...+.+=+++|++++++.. .+|+=...
T Consensus 150 ~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~ 229 (729)
T 1o94_A 150 FYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVY 229 (729)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCc
Confidence 3345577888999999998665554431 122446666788999997533 44543321
Q ss_pred --cCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 183 --GELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 183 --~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+-++..++....++.+.+ |+|++..|.|
T Consensus 230 ~~~G~~~~~~~~~~~~~l~~-~~d~~~v~~g 259 (729)
T 1o94_A 230 GPGQIEAEVDGQKFVEMADS-LVDMWDITIG 259 (729)
T ss_dssp CTTSCCTTTHHHHHHHHHGG-GCSEEEEEEC
T ss_pred CCCCCCchHHHHHHHHHHHh-hcCEEEEeee
Confidence 113113556566666655 7999988776
No 306
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=44.99 E-value=12 Score=31.57 Aligned_cols=65 Identities=11% Similarity=0.196 Sum_probs=37.3
Q ss_pred HHHHHHHHCCCCE--EEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 129 HEIELLAKQKVDE--VDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 129 ~E~~~Ai~~GAdE--ID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
.|++.+.+.|||- +|+. + |.+-- +...-...++++++.++. -++.+++.+ + +-.+.+.++|||+|
T Consensus 30 ~~i~~~~~~gad~lhvDvm-D-G~fvp-n~t~G~~~v~~lr~~~~~--DvhLMv~~p-----~---~~i~~~~~aGAd~i 96 (237)
T 3cu2_A 30 EEVTTLLENQINVLHFDIA-D-GQFSS-LFTVGAIGIKYFPTHCFK--DVHLMVRNQ-----L---EVAKAVVANGANLV 96 (237)
T ss_dssp HHHHHHHHTTCCEEEEEEE-B-SSSSS-CBCBCTHHHHTSCTTSEE--EEEEECSCH-----H---HHHHHHHHTTCSEE
T ss_pred HHHHHHHHcCCCEEEEEEe-c-Ccccc-chhhhHHHHHHHhhhCCC--CeEEEEECH-----H---HHHHHHHHcCCCEE
Confidence 4677788899995 7874 3 11110 122222455556555442 466666544 2 34667788999985
No 307
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=44.92 E-value=50 Score=29.11 Aligned_cols=74 Identities=9% Similarity=0.180 Sum_probs=47.8
Q ss_pred HHHHHHHHCCCCEEEEecChh-HhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 129 HEIELLAKQKVDEVDIVIQRS-LVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~-~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
.+++.+.+.|||-|.+- |.+ .-+.+- ..-.+-+.+++++.++ .+.||..-| +.+.+.+.++- .+|||+|-
T Consensus 237 e~a~~a~~~Gad~I~vs-~~ggr~~~~~-~~~~~~l~~v~~~~~~--~ipvia~GG-I~~~~D~~k~l----~~GAdaV~ 307 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVS-NHGARQLDYV-PATIMALEEVVKAAQG--RIPVFLDGG-VRRGTDVFKAL----ALGAAGVF 307 (370)
T ss_dssp HHHHHHHHTTCSEEEEC-CGGGTSSTTC-CCHHHHHHHHHHHTTT--SSCEEEESS-CCSHHHHHHHH----HHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEC-CCCCccCCCc-ccHHHHHHHHHHHhCC--CCEEEEECC-CCCHHHHHHHH----HcCCCEEe
Confidence 68899999999999874 433 111111 1234456667766654 367777777 54877776554 36999987
Q ss_pred cCCC
Q psy965 208 TSGS 211 (214)
Q Consensus 208 TSTG 211 (214)
-++.
T Consensus 308 iGr~ 311 (370)
T 1gox_A 308 IGRP 311 (370)
T ss_dssp ECHH
T ss_pred ecHH
Confidence 6553
No 308
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=44.71 E-value=1.2e+02 Score=24.18 Aligned_cols=98 Identities=12% Similarity=0.005 Sum_probs=55.2
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChh---HhhcC---ChhHHHHHHHHHHHHhcCCceEEEEE
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRS---LVLNN---QWPELFSEVKQMKEKCGEKIHMKTIL 180 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~---~l~sg---~~~~v~~Ei~~v~~a~~~~~~lKvIl 180 (214)
+.+++.....|+ ..+++.. ++.+.+.|.+-|++..... .+ .| .+..-.+++.++++++.. .-|++..
T Consensus 9 ~mklg~~~~~~~--~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~ 81 (262)
T 3p6l_A 9 GWRLGMQSYSFH--LFPLTEA---LDKTQELGLKYIEIYPGHKLGGKW-GDKVFDFNLDAQTQKEIKELAAS-KGIKIVG 81 (262)
T ss_dssp TEEEEEEGGGGT--TSCHHHH---HHHHHHTTCCEEEECTTEECCGGG-TTCEESTTCCHHHHHHHHHHHHH-TTCEEEE
T ss_pred CcEEEEEecccC--CCCHHHH---HHHHHHcCCCEEeecCCccccccc-ccccccccCCHHHHHHHHHHHHH-cCCeEEE
Confidence 455555533444 4455544 4556678999999986531 00 01 111112344455544432 2234332
Q ss_pred eccCC-CCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 181 AVGEL-KTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 181 Et~~L-~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
=.... ...+.+.++.+.|...|+++|.+.+|
T Consensus 82 ~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~ 113 (262)
T 3p6l_A 82 TGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA 113 (262)
T ss_dssp EEEECCSSTTHHHHHHHHHHHTTCSEEEECCC
T ss_pred EeccCCccHHHHHHHHHHHHHcCCCEEEecCC
Confidence 22222 24577889999999999999998776
No 309
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=44.51 E-value=41 Score=28.50 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=61.3
Q ss_pred eEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHH
Q psy965 110 CLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 189 (214)
Q Consensus 110 vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e 189 (214)
+.-|+ ++.|..+-+.+..-++.|.+.|||=|.-.= |+-..| .-.++++.+++.+++ .++|..-=| ..|.+
T Consensus 144 ~lKVI--lEt~~Lt~eei~~a~~ia~~aGADfVKTST--Gf~~gg---At~~dv~lmr~~vg~--~v~VKasGG-Irt~~ 213 (239)
T 3ngj_A 144 LTKVI--IECCYLTNEEKVEVCKRCVAAGAEYVKTST--GFGTHG---ATPEDVKLMKDTVGD--KALVKAAGG-IRTFD 213 (239)
T ss_dssp EEEEE--CCGGGSCHHHHHHHHHHHHHHTCSEEECCC--SSSSCC---CCHHHHHHHHHHHGG--GSEEEEESS-CCSHH
T ss_pred ceEEE--EecCCCCHHHHHHHHHHHHHHCcCEEECCC--CCCCCC---CCHHHHHHHHHhhCC--CceEEEeCC-CCCHH
Confidence 44443 588888999999999999999999877542 211112 223577778887764 466666555 65765
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCC
Q psy965 190 NIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 190 ~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+.. ..+++||+-|=||.|.
T Consensus 214 da~----~~i~aGA~riGtS~~~ 232 (239)
T 3ngj_A 214 DAM----KMINNGASRIGASAGI 232 (239)
T ss_dssp HHH----HHHHTTEEEEEESCHH
T ss_pred HHH----HHHHhcccceecccHH
Confidence 553 3348999999999874
No 310
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=44.48 E-value=1.4e+02 Score=25.11 Aligned_cols=81 Identities=6% Similarity=-0.017 Sum_probs=56.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e----ccCCCCHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A----VGELKTSENIYCA 194 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E----t~~L~t~e~i~~A 194 (214)
|...+..-+..++.|-+.|||-+=++.++ +.+...-+.+++-.++|.++++- -+|| . ||.--+.+.+.+
T Consensus 72 g~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~~~s~~~l~~~f~~va~a~~l----PiilYn~P~~tg~~l~~~~~~~- 145 (286)
T 2r91_A 72 ASLNADEAIALAKYAESRGAEAVASLPPY-YFPRLSERQIAKYFRDLCSAVSI----PVFLYNYPAAVGRDVDARAAKE- 145 (286)
T ss_dssp CCSSHHHHHHHHHHHHHTTCSEEEECCSC-SSTTCCHHHHHHHHHHHHHHCSS----CEEEEECHHHHSSCCCHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEEEcCCc-CCCCCCHHHHHHHHHHHHHhcCC----CEEEEeChhhcCCCCCHHHHHh-
Confidence 67788888899999999999998666554 44413678899999999888742 2333 2 453226666655
Q ss_pred HHHHHHcCCCEEEcCCC
Q psy965 195 SMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 195 ~~ia~~aGaDFIKTSTG 211 (214)
.-..-.||=|+|
T Consensus 146 -----~pnivgiKds~g 157 (286)
T 2r91_A 146 -----LGCIRGVKDTNE 157 (286)
T ss_dssp -----HSCEEEEEECCS
T ss_pred -----cCCEEEEEeCCC
Confidence 356677787776
No 311
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=44.40 E-value=90 Score=27.15 Aligned_cols=92 Identities=7% Similarity=-0.044 Sum_probs=62.7
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+-+ |...+..-+..++.|.+.|||-+=++.++ +.+ ..-+.+++-.++|.++++ +-+|| .
T Consensus 102 grvpViaGv-----g~~st~eai~la~~A~~~Gadavlv~~P~-Y~~-~s~~~l~~~f~~VA~a~~----lPiilYn~P~ 170 (332)
T 2r8w_A 102 GRRTLMAGI-----GALRTDEAVALAKDAEAAGADALLLAPVS-YTP-LTQEEAYHHFAAVAGATA----LPLAIYNNPT 170 (332)
T ss_dssp TSSEEEEEE-----CCSSHHHHHHHHHHHHHHTCSEEEECCCC-SSC-CCHHHHHHHHHHHHHHCS----SCEEEECCHH
T ss_pred CCCcEEEec-----CCCCHHHHHHHHHHHHhcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhcC----CCEEEEeCcc
Confidence 456655442 56778888889999999999999555443 444 356889999999988774 23344 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ .-..-.||=|+|
T Consensus 171 ~tg~~l~~e~~~~La~---~pnIvgiKdssg 198 (332)
T 2r8w_A 171 TTRFTFSDELLVRLAY---IPNIRAIKMPLP 198 (332)
T ss_dssp HHCCCCCHHHHHHHHT---STTEEEEEECCC
T ss_pred ccCcCCCHHHHHHHHc---CCCEEEEEeCCC
Confidence 453226677765543 356777888876
No 312
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=44.02 E-value=59 Score=25.90 Aligned_cols=86 Identities=3% Similarity=-0.145 Sum_probs=47.8
Q ss_pred cccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHH--------HHHHHHHHHHHCCCCEEEEecChhHhhcC------Ch
Q psy965 91 VSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLE--------TRLHEIELLAKQKVDEVDIVIQRSLVLNN------QW 156 (214)
Q Consensus 91 P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~--------~K~~E~~~Ai~~GAdEID~Vin~~~l~sg------~~ 156 (214)
+..++..++.+++ .++++.++ ..+|.-.++-+ .=..-++.|-+.|++-|=+. .|..-.+ .|
T Consensus 44 ~~~~~~~~~~l~~--~gl~~~~~-~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~--~g~~~~~~~~~~~~~ 118 (275)
T 3qc0_A 44 AIGLGEAGRIVRA--NGLKLTGL-CRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCLVLV--AGGLPGGSKNIDAAR 118 (275)
T ss_dssp HHCHHHHHHHHHH--HTCEESCE-EEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCEEEE--CBCCCTTCCCHHHHH
T ss_pred ccCHHHHHHHHHH--cCCceEEe-ecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEe--eCCCCCCCcCHHHHH
Confidence 3456677777774 56666655 23332222211 11234666777899875443 3333222 34
Q ss_pred hHHHHHHHHHHHHhcCCceEEEEEec
Q psy965 157 PELFSEVKQMKEKCGEKIHMKTILAV 182 (214)
Q Consensus 157 ~~v~~Ei~~v~~a~~~~~~lKvIlEt 182 (214)
+.+.+-++.+.+.+.. .-+++-+|+
T Consensus 119 ~~~~~~l~~l~~~a~~-~gv~l~lE~ 143 (275)
T 3qc0_A 119 RMVVEGIAAVLPHARA-AGVPLAIEP 143 (275)
T ss_dssp HHHHHHHHHHHHHHHH-HTCCEEECC
T ss_pred HHHHHHHHHHHHHHHH-cCCEEEEeE
Confidence 5556666666666643 458999996
No 313
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=43.85 E-value=65 Score=27.59 Aligned_cols=84 Identities=18% Similarity=0.162 Sum_probs=58.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHH
Q psy965 117 FPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASM 196 (214)
Q Consensus 117 FP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ 196 (214)
++.|..+-+.+..-++.|.+.|||=|=-. -|.-..| .-.++++.|++.+++ .++|-.--| ..|.++..
T Consensus 165 lEt~~Lt~eei~~A~~ia~eaGADfVKTS--TGf~~~G---AT~edV~lm~~~vg~--~v~VKaAGG-Irt~~~al---- 232 (260)
T 3r12_A 165 IETCYLDTEEKIAACVISKLAGAHFVKTS--TGFGTGG---ATAEDVHLMKWIVGD--EMGVKASGG-IRTFEDAV---- 232 (260)
T ss_dssp CCGGGCCHHHHHHHHHHHHHTTCSEEECC--CSSSSCC---CCHHHHHHHHHHHCT--TSEEEEESS-CCSHHHHH----
T ss_pred EeCCCCCHHHHHHHHHHHHHhCcCEEEcC--CCCCCCC---CCHHHHHHHHHHhCC--CceEEEeCC-CCCHHHHH----
Confidence 68888899999999999999999864332 3322222 334678888888875 355544444 65765543
Q ss_pred HHHHcCCCEEEcCCCC
Q psy965 197 TAMFAGSDFIKTSGSI 212 (214)
Q Consensus 197 ia~~aGaDFIKTSTGf 212 (214)
.-+++||+-|=||.|.
T Consensus 233 ~mi~aGA~RiGtS~g~ 248 (260)
T 3r12_A 233 KMIMYGADRIGTSSGV 248 (260)
T ss_dssp HHHHTTCSEEEESCHH
T ss_pred HHHHcCCceeecchHH
Confidence 3389999999999884
No 314
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=43.69 E-value=1.6e+02 Score=25.38 Aligned_cols=10 Identities=10% Similarity=0.102 Sum_probs=4.9
Q ss_pred CCHHHHHHHH
Q psy965 62 DTEAVVETLT 71 (214)
Q Consensus 62 ~T~~~I~~lc 71 (214)
.|..+++++-
T Consensus 16 ~t~~~lr~~~ 25 (275)
T 3vav_A 16 VTVPKLQAMR 25 (275)
T ss_dssp CCHHHHHHHH
T ss_pred cCHHHHHHHH
Confidence 3555555553
No 315
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=43.68 E-value=66 Score=27.87 Aligned_cols=81 Identities=15% Similarity=0.098 Sum_probs=47.5
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhcC--CceEEEEEeccCCCCHHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGE--KIHMKTILAVGELKTSENIYCASMTAM 199 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~~--~~~lKvIlEt~~L~t~e~i~~A~~ia~ 199 (214)
..+.=+..+++.++.|||-||+=.--.. -| ..-...+|+..+...... ...+.+-|.|-.- ...+.|.
T Consensus 44 ~~~~a~~~a~~~v~~GAdiIDIGgeSTr--Pga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~-------~Va~aAl 114 (294)
T 2y5s_A 44 ARDDALRRAERMIAEGADLLDIGGESTR--PGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKP-------AVMRAAL 114 (294)
T ss_dssp CTTHHHHHHHHHHHTTCSEEEEESSCCS--TTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCH-------HHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCC--CCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCH-------HHHHHHH
Confidence 4667777899999999999998752210 01 111234555554433321 0123345555522 3345566
Q ss_pred HcCCCEEEcCCCC
Q psy965 200 FAGSDFIKTSGSI 212 (214)
Q Consensus 200 ~aGaDFIKTSTGf 212 (214)
++|++.|.-=+|+
T Consensus 115 ~aGa~iINdVsg~ 127 (294)
T 2y5s_A 115 AAGADLINDIWGF 127 (294)
T ss_dssp HHTCSEEEETTTT
T ss_pred HcCCCEEEECCCC
Confidence 6799999977775
No 316
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=43.47 E-value=93 Score=25.60 Aligned_cols=92 Identities=10% Similarity=0.013 Sum_probs=53.1
Q ss_pred CCeEEEecCCCCC--CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc--
Q psy965 108 QPCLSQPAGFPSG--QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-- 183 (214)
Q Consensus 108 v~vatV~igFP~G--~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~-- 183 (214)
.+++.....|+.. ..+++. ++.+.+.|.+-|++...-.. .+. ..++.++++.+.. .-+++..=++
T Consensus 21 mklg~~~~~~~~~~~~~~l~~----l~~~~~~G~~~vEl~~~~~~----~~~--~~~~~~l~~~l~~-~gl~i~~~~~~~ 89 (309)
T 2hk0_A 21 MKHGIYYSYWEHEWSAKFGPY----IEKVAKLGFDIIEVAAHHIN----EYS--DAELATIRKSAKD-NGIILTAGIGPS 89 (309)
T ss_dssp CEEEEEGGGGCSCTTSCSHHH----HHHHHHTTCSEEEEEHHHHT----TSC--HHHHHHHHHHHHH-TTCEEEEECCCC
T ss_pred ceeEEehhhcccccccccHHH----HHHHHHhCCCEEEeccCCcc----ccc--hhhHHHHHHHHHH-cCCeEEEecCCC
Confidence 4455543455431 234443 56677889999999865321 111 1455555555543 2355554232
Q ss_pred ---CCCC-H--------HHHHHHHHHHHHcCCCEEEcCC
Q psy965 184 ---ELKT-S--------ENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 184 ---~L~t-~--------e~i~~A~~ia~~aGaDFIKTST 210 (214)
.|.+ + +.+.++.++|...|+.+|...+
T Consensus 90 ~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~ 128 (309)
T 2hk0_A 90 KTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGAL 128 (309)
T ss_dssp SSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeec
Confidence 2322 1 4567888999999999998654
No 317
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=43.46 E-value=1.1e+02 Score=26.87 Aligned_cols=85 Identities=9% Similarity=-0.058 Sum_probs=56.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecC----hhH-hhc--------CChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQ----RSL-VLN--------NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 189 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin----~~~-l~s--------g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e 189 (214)
+.+.-..+++.+.+.|.+-+.+=+- .|. +++ .+.+...+=++++++++++ -+.+++....--+.+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~--d~~l~vDan~~~~~~ 223 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGP--DVDIIVENHGHTDLV 223 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCT--TSEEEEECTTCSCHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHH
Confidence 6677788999999999999886431 121 111 0223445567778888875 356666654333777
Q ss_pred HHHHHHHHHHHcCCCEEEcC
Q psy965 190 NIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 190 ~i~~A~~ia~~aGaDFIKTS 209 (214)
+..+.++...+.|.+||--+
T Consensus 224 ~ai~~~~~l~~~~i~~iE~P 243 (403)
T 2ox4_A 224 SAIQFAKAIEEFNIFFYEEI 243 (403)
T ss_dssp HHHHHHHHHGGGCEEEEECC
T ss_pred HHHHHHHHHHhhCCCEEeCC
Confidence 77777777778899998654
No 318
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=43.40 E-value=92 Score=27.02 Aligned_cols=85 Identities=15% Similarity=0.072 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhcCCceEEEEEec-----------cCCCC-H-
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAV-----------GELKT-S- 188 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~~~~~lKvIlEt-----------~~L~t-~- 188 (214)
+++.++.. +.+.|.+-|++..+- ..-.+ .......++.++++++.. .-|++..=+ +-|.+ +
T Consensus 34 ~~~e~l~~---aa~~G~~~VEl~~~~-~~p~~~~~~~~~~~~~~l~~~l~~-~GL~i~~~~~~~~~~p~~~~g~l~~~d~ 108 (386)
T 1muw_A 34 DPVETVQR---LAELGAHGVTFHDDD-LIPFGSSDTERESHIKRFRQALDA-TGMTVPMATTNLFTHPVFKDGGFTANDR 108 (386)
T ss_dssp CHHHHHHH---HHHHTCCEEEEEHHH-HSCTTCCHHHHHHHHHHHHHHHHH-HTCBCCEEECCCSSSGGGTTCSTTCSSH
T ss_pred CHHHHHHH---HHHcCCCEEEeeCCC-CCcccCcccccHHHHHHHHHHHHH-hCCeEEEEecccccccccccCCCCCCCH
Confidence 46666544 445699999987531 11111 111113455555555543 223332211 12432 1
Q ss_pred -------HHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 189 -------ENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 189 -------e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+.+.++.++|...|+++|...+|+
T Consensus 109 ~~r~~~i~~~~~~i~~A~~LGa~~vvv~~g~ 139 (386)
T 1muw_A 109 DVRRYALRKTIRNIDLAVELGAKTYVAWGGR 139 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSEEEECCTT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 356778889999999999987764
No 319
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=43.31 E-value=67 Score=25.40 Aligned_cols=71 Identities=17% Similarity=0.282 Sum_probs=40.3
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
...++.+.+.|++.|-+. +...-. .......+.++++++.++ +.+|+-.+ ..+.+++ +.+.++|+|+|-
T Consensus 36 ~~~a~~~~~~G~d~i~v~-~~~~~~-~~~~~~~~~i~~i~~~~~----ipvi~~g~-i~~~~~~----~~~~~~Gad~V~ 104 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAIL-DITAAP-EGRATFIDSVKRVAEAVS----IPVLVGGG-VRSLEDA----TTLFRAGADKVS 104 (253)
T ss_dssp HHHHHHHHHTTCSCEEEE-ECCCCT-TTHHHHHHHHHHHHHHCS----SCEEEESS-CCSHHHH----HHHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEE-eCCccc-cCCcccHHHHHHHHHhcC----CCEEEECC-CCCHHHH----HHHHHcCCCEEE
Confidence 446777788999988765 221100 012233455666665442 44565444 5465554 445568999986
Q ss_pred cC
Q psy965 208 TS 209 (214)
Q Consensus 208 TS 209 (214)
-.
T Consensus 105 i~ 106 (253)
T 1h5y_A 105 VN 106 (253)
T ss_dssp ES
T ss_pred EC
Confidence 43
No 320
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=43.27 E-value=1.1e+02 Score=26.98 Aligned_cols=85 Identities=9% Similarity=-0.006 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecC----hhHh-hc-------------CChhHHHHHHHHHHHHhcCCceEEEEEeccC
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQ----RSLV-LN-------------NQWPELFSEVKQMKEKCGEKIHMKTILAVGE 184 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin----~~~l-~s-------------g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~ 184 (214)
+.+.-..+++.+++.|.+-+.+=+- .|.. ++ .+.+...+=++++++++++ -+.+.+....
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~--d~~l~vDan~ 227 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGD--DADIIVEIHS 227 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCS--SSEEEEECTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCC--CCEEEEECCC
Confidence 6677788999999999999886431 1321 10 1224445567788888875 3566677643
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 185 LKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 185 L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
--+.++..+.++...+.|.+||--+
T Consensus 228 ~~~~~~ai~~~~~l~~~~i~~iE~P 252 (410)
T 2gl5_A 228 LLGTNSAIQFAKAIEKYRIFLYEEP 252 (410)
T ss_dssp CSCHHHHHHHHHHHGGGCEEEEECS
T ss_pred CCCHHHHHHHHHHHHhcCCCeEECC
Confidence 3377777777777778899998644
No 321
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=43.21 E-value=1.3e+02 Score=26.87 Aligned_cols=93 Identities=8% Similarity=0.038 Sum_probs=61.4
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
+++.-++.+|+- | .+.+.-..+++.+++.|.+-+.+= .| ++.+...+=++++++++++. +.+.+....--
T Consensus 184 ~vp~y~~~~g~~-~-~~~e~~~~~a~~~~~~Gf~~vKik--~g----~~~~~d~e~v~avR~a~G~d--~~l~vDan~~~ 253 (441)
T 2hxt_A 184 GYPAYTTSPGWL-G-YSDEKLVRLAKEAVADGFRTIKLK--VG----ANVQDDIRRCRLARAAIGPD--IAMAVDANQRW 253 (441)
T ss_dssp CEEEEEEEEECT-T-SCHHHHHHHHHHHHHTTCSEEEEE--CC----SCHHHHHHHHHHHHHHHCSS--SEEEEECTTCC
T ss_pred CcceeEeccccc-C-CCHHHHHHHHHHHHHcCCCEEEEc--cC----CCHHHHHHHHHHHHHhcCCC--CeEEEECCCCC
Confidence 444433324543 3 356667788999999999998853 22 25556666788889888753 45566654333
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+.++-.+.++...+.|.+||--.
T Consensus 254 ~~~~a~~~~~~l~~~~i~~iEqP 276 (441)
T 2hxt_A 254 DVGPAIDWMRQLAEFDIAWIEEP 276 (441)
T ss_dssp CHHHHHHHHHTTGGGCCSCEECC
T ss_pred CHHHHHHHHHHHHhcCCCeeeCC
Confidence 66776677777777899998654
No 322
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=43.14 E-value=22 Score=29.54 Aligned_cols=65 Identities=23% Similarity=0.287 Sum_probs=35.8
Q ss_pred HHHHHHHHCCCCE--EEEecChhHhhcCChhHHHHHHHHHHHHhcCC--ceEEEEEeccCCCCHHHHHHHHHHHHHcCCC
Q psy965 129 HEIELLAKQKVDE--VDIVIQRSLVLNNQWPELFSEVKQMKEKCGEK--IHMKTILAVGELKTSENIYCASMTAMFAGSD 204 (214)
Q Consensus 129 ~E~~~Ai~~GAdE--ID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~--~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaD 204 (214)
.|++.+ +.|||- +|+. +-..+. +...-...++++++.+..+ .||++ +. .+.. .+.+.++|||
T Consensus 17 ~~i~~~-~~gad~lHvDvm-DG~fvp--n~t~G~~~v~~lr~~~~~~~dvhLmv--~d-----p~~~---i~~~~~aGAd 82 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIM-DGHFVP--NLTLSPFFVSQVKKLATKPLDCHLMV--TR-----PQDY---IAQLARAGAD 82 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEE-CSSSSS--CCCBCHHHHHHHHTTCCSCEEEEEES--SC-----GGGT---HHHHHHHTCS
T ss_pred HHHHHH-HcCCCEEEEEEE-eCccCc--cchhcHHHHHHHHhccCCcEEEEEEe--cC-----HHHH---HHHHHHcCCC
Confidence 356666 999994 7854 322222 1223345677777666322 34433 22 2222 3677889999
Q ss_pred EEE
Q psy965 205 FIK 207 (214)
Q Consensus 205 FIK 207 (214)
+|-
T Consensus 83 ~it 85 (231)
T 3ctl_A 83 FIT 85 (231)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 323
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=42.98 E-value=74 Score=25.91 Aligned_cols=101 Identities=15% Similarity=0.032 Sum_probs=55.1
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE-Eecc-
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI-LAVG- 183 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~- 183 (214)
...+++.-.-.||. ..+++..+ +.+.+.|.+-|++......-....++.-.+++.++++++.. .-+++. +..+
T Consensus 15 ~~~~~gi~~~~~~~-~~~~~~~l---~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~gl~i~~~~~~~ 89 (295)
T 3cqj_A 15 KQIPLGIYEKALPA-GECWLERL---QLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVE-TGVRVPSMCLSA 89 (295)
T ss_dssp -CCCEEEEGGGSCC-CSCHHHHH---HHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHH-HCCEEEEEEEGG
T ss_pred ccccceeeeecCCC-CCCHHHHH---HHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHH-cCCeEEEEecCc
Confidence 35566665334543 35666655 44557899999998654311000011113445555555543 234543 2221
Q ss_pred ---C-CCC---------HHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 184 ---E-LKT---------SENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 184 ---~-L~t---------~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+ |.+ .+.+.++.++|...|+++|....|
T Consensus 90 ~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~~ 130 (295)
T 3cqj_A 90 HRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGY 130 (295)
T ss_dssp GGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCC
Confidence 1 322 245678889999999999987643
No 324
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=42.83 E-value=98 Score=28.72 Aligned_cols=77 Identities=10% Similarity=0.072 Sum_probs=48.1
Q ss_pred HHHHHHHHHCCCCEEEEecChhHh-hcCChhHHHHHHHHHHHHhcC---CceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLV-LNNQWPELFSEVKQMKEKCGE---KIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l-~sg~~~~v~~Ei~~v~~a~~~---~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
..+++.+.+.|||-|++- |.|.- ..+. ..-.+-+.+++++++. ...+.||..-| +.+.+.+.+|- ..||
T Consensus 354 ~e~A~~a~~aGad~I~vs-~hgG~~~d~~-~~~~~~l~~v~~~v~~~~~~~~ipVia~GG-I~~g~Dv~kaL----alGA 426 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLS-NHGGRQLDFS-RAPIEVLAETMPILEQRNLKDKLEVFVDGG-VRRGTDVLKAL----CLGA 426 (511)
T ss_dssp HHHHHHHHHTTCSEEEEC-CTTTTSSTTC-CCHHHHHHHHHHHHHTTTCBTTBEEEEESS-CCSHHHHHHHH----HHTC
T ss_pred HHHHHHHHHcCCCEEEEc-CCCCccCCCC-CchHHHHHHHHHHHHhhccCCCcEEEEECC-CCCHHHHHHHH----HcCC
Confidence 567999999999999884 44321 1111 1123445666666631 12478888777 55878776654 3699
Q ss_pred CEEEcCCC
Q psy965 204 DFIKTSGS 211 (214)
Q Consensus 204 DFIKTSTG 211 (214)
|+|--++.
T Consensus 427 daV~iGr~ 434 (511)
T 1kbi_A 427 KGVGLGRP 434 (511)
T ss_dssp SEEEECHH
T ss_pred CEEEECHH
Confidence 99876553
No 325
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=42.74 E-value=82 Score=27.57 Aligned_cols=81 Identities=11% Similarity=0.073 Sum_probs=56.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
.+.+.-+.+++.+++.|.+-+-+=+.. ++.+.-.+=+++++++.|+ .+.+.+....=-+.++-.+.++...+.
T Consensus 145 ~~~~~~~~~a~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~~~g~--~~~l~vDan~~~~~~~A~~~~~~l~~~ 217 (377)
T 3my9_A 145 PDFDADLERMRAMVPAGHTVFKMKTGV-----KPHAEELRILETMRGEFGE--RIDLRLDFNQALTPFGAMKILRDVDAF 217 (377)
T ss_dssp SSHHHHHHHHHHHTTTTCCEEEEECSS-----SCHHHHHHHHHHHHHHHGG--GSEEEEECTTCCCTTTHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCC-----CcHHHHHHHHHHHHHHhCC--CCeEEEeCCCCcCHHHHHHHHHHHhhc
Confidence 366777788999999999988775432 2345556667888888875 345566654333666666777777788
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|.+||--+
T Consensus 218 ~i~~iEqP 225 (377)
T 3my9_A 218 RPTFIEQP 225 (377)
T ss_dssp CCSCEECC
T ss_pred CCCEEECC
Confidence 99998644
No 326
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=42.48 E-value=42 Score=27.30 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=40.4
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.-++.+.+.|+++|.++ ++..-..+.- .-.+.++++++.+ .+.||.--| +.+.+.+.+ +.++|+|+|--
T Consensus 39 ~~a~~~~~~G~~~i~v~-d~~~~~~~~~-~~~~~i~~i~~~~----~ipvi~~Gg-i~~~~~~~~----~l~~Gad~V~i 107 (247)
T 3tdn_A 39 DWVVEVEKRGAGEILLT-SIDRDGTKSG-YDTEMIRFVRPLT----TLPIIASGG-AGKMEHFLE----AFLRGADKVSI 107 (247)
T ss_dssp HHHHHHHHTTCSEEEEE-ETTTTTCSSC-CCHHHHHHHGGGC----CSCEEEESC-CCSHHHHHH----HHHTTCSEECC
T ss_pred HHHHHHHHcCCCEEEEE-ecCcccCCCc-ccHHHHHHHHHhC----CCCEEEeCC-CCCHHHHHH----HHHcCCCeeeh
Confidence 46777778999999754 4432221111 1123445555433 355677655 547666543 34678998865
Q ss_pred CC
Q psy965 209 SG 210 (214)
Q Consensus 209 ST 210 (214)
+|
T Consensus 108 g~ 109 (247)
T 3tdn_A 108 NT 109 (247)
T ss_dssp SH
T ss_pred hh
Confidence 44
No 327
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=42.44 E-value=1e+02 Score=25.04 Aligned_cols=132 Identities=8% Similarity=-0.111 Sum_probs=67.4
Q ss_pred CHHHHHHHHHHhhc-cCchhhhcccccc--CcccHHHHHHhhhcCCCCCCeEEEecCCCC-------CCCCH-------H
Q psy965 63 TEAVVETLTLKAIQ-PLSEELKEKVLRG--FVSTVWHGSDNLKTKLVYQPCLSQPAGFPS-------GQYLL-------E 125 (214)
Q Consensus 63 T~~~I~~lc~eA~~-~f~~~~~~~~~cv--~P~~V~~a~~~L~~~gs~v~vatV~igFP~-------G~~~~-------~ 125 (214)
...++++.++.+.+ +|... ..... ++..+...++.++ ..++++.++-.++|. +.... +
T Consensus 39 ~~~~~~~~l~~~~~~G~~~v---El~~~~~~~~~~~~~~~~l~--~~gl~~~~~~~~~p~~~~~~~l~~~d~~~r~~~~~ 113 (290)
T 2zvr_A 39 FKGDLRKGMELAKRVGYQAV---EIAVRDPSIVDWNEVKILSE--ELNLPICAIGTGQAYLADGLSLTHPNDEIRKKAIE 113 (290)
T ss_dssp CHHHHHHHHHHHHHHTCSEE---EEECSCGGGSCHHHHHHHHH--HHTCCEEEEECTHHHHTTCCCTTCSSHHHHHHHHH
T ss_pred cccCHHHHHHHHHHhCCCEE---EEcCCCcchhhHHHHHHHHH--HcCCeEEEEeccCccccCCCCCCCCCHHHHHHHHH
Confidence 34567777777664 34311 00011 3456777788887 467888777443333 11111 1
Q ss_pred HHHHHHHHHHHCCCCEEEEecChhHhh----cCChhHHHHHHHHHHHHhcCCceEEEEEecc------CCCCHHHHHHHH
Q psy965 126 TRLHEIELLAKQKVDEVDIVIQRSLVL----NNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCAS 195 (214)
Q Consensus 126 ~K~~E~~~Ai~~GAdEID~Vin~~~l~----sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~------~L~t~e~i~~A~ 195 (214)
.=..-++.|-+.|++-+= +...|..- ...|+.+.+-++++.+.+. . +++-+|+- .+.+.++. .
T Consensus 114 ~~~~~i~~A~~lG~~~v~-~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~--~-v~l~lEn~~~~~~~~~~~~~~~---~ 186 (290)
T 2zvr_A 114 RVVKHTEVAGMFGALVII-GLVRGRREGRSYEETEELFIESMKRLLELTE--H-AKFVIEPLNRYETDFINTIDDA---L 186 (290)
T ss_dssp HHHHHHHHHHHHTCEEEE-SGGGCCCTTSCHHHHHHHHHHHHHHHHHHCS--S-CCEEECCCCTTTCSSCCSHHHH---H
T ss_pred HHHHHHHHHHHcCCCEEE-ecCCCCCCCcCHHHHHHHHHHHHHHHHHHhc--c-CEEEEEeCCCcCccccCCHHHH---H
Confidence 112345566678987542 12123211 1124455566666666554 3 89999984 34455544 3
Q ss_pred HHHHHcCCCEE
Q psy965 196 MTAMFAGSDFI 206 (214)
Q Consensus 196 ~ia~~aGaDFI 206 (214)
+++...|.+.+
T Consensus 187 ~l~~~~~~~~v 197 (290)
T 2zvr_A 187 RILRKINSNRV 197 (290)
T ss_dssp HHHHHHCCTTE
T ss_pred HHHHHcCCCCE
Confidence 44444444433
No 328
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=42.20 E-value=48 Score=28.54 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=45.2
Q ss_pred HHHHHHHHCCCCEEEEecChhH-hhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 129 HEIELLAKQKVDEVDIVIQRSL-VLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~-l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
.+++.+.+.|+|-|.+. .... -..|.. .-.+-+.++++..+ +.||..-| +.+.+++.++- ..|||+|-
T Consensus 121 ~~a~~~~~~GaD~i~v~-g~~~GG~~g~~-~~~~ll~~i~~~~~----iPViaaGG-I~~~~~~~~al----~~GAdgV~ 189 (332)
T 2z6i_A 121 ALAKRMEKIGADAVIAE-GMEAGGHIGKL-TTMTLVRQVATAIS----IPVIAAGG-IADGEGAAAGF----MLGAEAVQ 189 (332)
T ss_dssp HHHHHHHHTTCSCEEEE-CTTSSEECCSS-CHHHHHHHHHHHCS----SCEEEESS-CCSHHHHHHHH----HTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEE-CCCCCCCCCCc-cHHHHHHHHHHhcC----CCEEEECC-CCCHHHHHHHH----HcCCCEEE
Confidence 46788889999998774 2210 011211 22355566666543 45666666 65778775543 37999999
Q ss_pred cCCCC
Q psy965 208 TSGSI 212 (214)
Q Consensus 208 TSTGf 212 (214)
.+|+|
T Consensus 190 vGs~~ 194 (332)
T 2z6i_A 190 VGTRF 194 (332)
T ss_dssp ECHHH
T ss_pred ecHHH
Confidence 88875
No 329
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=42.19 E-value=53 Score=28.74 Aligned_cols=81 Identities=10% Similarity=0.069 Sum_probs=45.3
Q ss_pred HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEec-----------cCCCC-H--------HH
Q psy965 131 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV-----------GELKT-S--------EN 190 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt-----------~~L~t-~--------e~ 190 (214)
++.+.+.|.+-|++..+-..-..........++.++++++.. .-|++..=+ +.|.+ + +.
T Consensus 39 l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~GL~i~~~~~~~f~~p~~~~g~l~~~d~~~r~~~i~~ 117 (394)
T 1xla_A 39 VHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKD-TGLKVPMVTTNLFSHPVFKDGGFTSNDRSIRRFALAK 117 (394)
T ss_dssp HHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHH-HCCBCCEEECCCSSSGGGTTCSTTCSSHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHH-cCCeEEEEecCccCCccccCCccCCCCHHHHHHHHHH
Confidence 455556799999997632100011222223455556655543 224443211 12322 1 34
Q ss_pred HHHHHHHHHHcCCCEEEcCCCC
Q psy965 191 IYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 191 i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+.++.++|...|+++|-+-+|+
T Consensus 118 ~~~~i~~A~~LGa~~vvv~~G~ 139 (394)
T 1xla_A 118 VLHNIDLAAEMGAETFVMWGGR 139 (394)
T ss_dssp HHHHHHHHHHTTCSEEEECCTT
T ss_pred HHHHHHHHHHhCCCEEEECCCC
Confidence 6778899999999999987774
No 330
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=42.13 E-value=1e+02 Score=27.26 Aligned_cols=78 Identities=8% Similarity=-0.057 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCC
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSD 204 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaD 204 (214)
+.-..+++.+++.|.+-+.+=+.. +.+.-.+=+++++++.++. +.+++....=-+.++-.+.++...+.|.+
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~------~~~~d~~~v~avR~a~g~~--~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 228 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGF------DDARDVRNALHVRELLGAA--TPLMADANQGWDLPRARQMAQRLGPAQLD 228 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSS------CHHHHHHHHHHHHHHHCSS--SCEEEECTTCCCHHHHHHHHHHHGGGCCS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCC------CHHHHHHHHHHHHHhcCCC--ceEEEeCCCCCCHHHHHHHHHHHHHhCCC
Confidence 445678888899999988874431 4555666778888888752 44566654333777777778878888999
Q ss_pred EEEcCC
Q psy965 205 FIKTSG 210 (214)
Q Consensus 205 FIKTST 210 (214)
||--+.
T Consensus 229 ~iEeP~ 234 (392)
T 3ddm_A 229 WLEEPL 234 (392)
T ss_dssp EEECCS
T ss_pred EEECCC
Confidence 997543
No 331
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=42.05 E-value=51 Score=29.44 Aligned_cols=76 Identities=20% Similarity=0.191 Sum_probs=45.7
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhh-----cCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVL-----NNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~-----sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
..+++.+++.|||-|++-+.-|... .|--- ..+.++.+++.. .. .||..-| +.+.+++.+| +.+|
T Consensus 152 ~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~---p~l~aI~~~~~~-~~-PVIAdGG-I~~~~di~kA----La~G 221 (361)
T 3r2g_A 152 YAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGV---PMLTCIQDCSRA-DR-SIVADGG-IKTSGDIVKA----LAFG 221 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCC---CHHHHHHHHTTS-SS-EEEEESC-CCSHHHHHHH----HHTT
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcCccccccCCccH---HHHHHHHHHHHh-CC-CEEEECC-CCCHHHHHHH----HHcC
Confidence 3578999999999999744332211 11001 134555555443 22 4555555 6577877654 4579
Q ss_pred CCEEEcCCCCC
Q psy965 203 SDFIKTSGSIQ 213 (214)
Q Consensus 203 aDFIKTSTGf~ 213 (214)
||+|--+|.|.
T Consensus 222 Ad~V~iGr~f~ 232 (361)
T 3r2g_A 222 ADFVMIGGMLA 232 (361)
T ss_dssp CSEEEESGGGT
T ss_pred CCEEEEChHHh
Confidence 99998777653
No 332
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=42.04 E-value=14 Score=35.76 Aligned_cols=88 Identities=11% Similarity=0.148 Sum_probs=61.9
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhc--CChhHH--HHHHHHHHHHhcCCceEEEEE--eccCCCCH
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN--NQWPEL--FSEVKQMKEKCGEKIHMKTIL--AVGELKTS 188 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s--g~~~~v--~~Ei~~v~~a~~~~~~lKvIl--Et~~L~t~ 188 (214)
++|.+|. .++.-..-+..|.++|-+- ++||-|+-.+ |++-.. ..+|+++++-++. +-+|+|+ +++-+ .
T Consensus 300 ~~~~~g~-n~~~~k~yIDfAa~~G~~y--vlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~-kgV~i~lw~~~~~~--~ 373 (641)
T 3a24_A 300 VDFVTGV-NNPTYKAYIDFASANGIEY--VILDEGWAVNLQADLMQVVKEIDLKELVDYAAS-KNVGIILWAGYHAF--E 373 (641)
T ss_dssp CSSCCSS-SHHHHHHHHHHHHHTTCCE--EEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHH-TTCEEEEEEEHHHH--H
T ss_pred cCCcCCC-CHHHHHHHHHHHHHcCCCE--EEEecccccCCCCCccccCCcCCHHHHHHHHHh-cCCEEEEEeeCcch--H
Confidence 5888996 6666667999999999988 4558887532 222111 1357888877665 5678887 44433 3
Q ss_pred HHHHHHHHHHHHcCCCEEEc
Q psy965 189 ENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKT 208 (214)
++..++.....+-|++.||+
T Consensus 374 ~~~~~~~~~~~~~Gv~gvK~ 393 (641)
T 3a24_A 374 RDMENVCRHYAEMGVKGFKV 393 (641)
T ss_dssp TSHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 45677888999999999996
No 333
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=41.99 E-value=1.5e+02 Score=24.98 Aligned_cols=93 Identities=9% Similarity=0.012 Sum_probs=63.3
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- -+|| .
T Consensus 68 gr~pviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~ia~a~~l----PiilYn~P~ 136 (289)
T 2yxg_A 68 GRVQVIAG-----AGSNCTEEAIELSVFAEDVGADAVLSITPY-YNK-PTQEGLRKHFGKVAESINL----PIVLYNVPS 136 (289)
T ss_dssp TSSEEEEE-----CCCSSHHHHHHHHHHHHHHTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHCSS----CEEEEECHH
T ss_pred CCCcEEEe-----CCCCCHHHHHHHHHHHHhcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhcCC----CEEEEeCcc
Confidence 35665544 266778888899999999999999777664 334 4668899999999988742 2333 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ ..-..-.||=|+|
T Consensus 137 ~tg~~l~~~~~~~La~--~~pnivgiK~s~g 165 (289)
T 2yxg_A 137 RTAVNLEPKTVKLLAE--EYSNISAVKEANP 165 (289)
T ss_dssp HHSCCCCHHHHHHHHH--HCTTEEEEEECCS
T ss_pred ccCcCCCHHHHHHHHH--hCCCEEEEEeCCC
Confidence 453226677755541 2356777888876
No 334
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=41.52 E-value=74 Score=27.60 Aligned_cols=88 Identities=7% Similarity=-0.140 Sum_probs=56.8
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
.+++-.. ++. .+.+.-..+++.+.+.|.+-+.+ +.| ++.+...+=++++++++++. +.+.+....--
T Consensus 135 ~vp~~~~-~~~----~~~~~~~~~a~~~~~~Gf~~iKi--k~g----~~~~~~~e~v~avr~a~g~~--~~l~vDan~~~ 201 (371)
T 2ps2_A 135 RLPLISS-IYV----GEPEDMRARVAKYRAKGYKGQSV--KIS----GEPVTDAKRITAALANQQPD--EFFIVDANGKL 201 (371)
T ss_dssp CEEBEEE-ECS----CCHHHHHHHHHHHHTTTCCEEEE--ECC----SCHHHHHHHHHHHTTTCCTT--CEEEEECTTBC
T ss_pred ceEEEEE-eCC----CCHHHHHHHHHHHHHhChheEEe--ecC----CCHHHHHHHHHHHHHhcCCC--CEEEEECCCCc
Confidence 4555555 332 35677778899999999999985 333 24555566677777777642 45566654333
Q ss_pred CHHHHHHHHHHH-HHcCCCEEEc
Q psy965 187 TSENIYCASMTA-MFAGSDFIKT 208 (214)
Q Consensus 187 t~e~i~~A~~ia-~~aGaDFIKT 208 (214)
+.++..+.++.. .+.|. ||--
T Consensus 202 ~~~~a~~~~~~l~~~~~i-~iE~ 223 (371)
T 2ps2_A 202 SVETALRLLRLLPHGLDF-ALEA 223 (371)
T ss_dssp CHHHHHHHHHHSCTTCCC-EEEC
T ss_pred CHHHHHHHHHHHHhhcCC-cCcC
Confidence 666666666666 67788 8854
No 335
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=40.94 E-value=29 Score=31.45 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=30.8
Q ss_pred ceEEEEEecc--CCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 174 IHMKTILAVG--ELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 174 ~~lKvIlEt~--~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.+.-+|-|.| --++.|...+..+.|.+||||.||-.|
T Consensus 27 ~~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~ 65 (385)
T 1vli_A 27 APVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQM 65 (385)
T ss_dssp SCCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeee
Confidence 4688999986 556778888999999999999999544
No 336
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=40.90 E-value=52 Score=27.93 Aligned_cols=92 Identities=12% Similarity=0.042 Sum_probs=60.3
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|.+.|||-+=++.+ .+.+ ..-+.+++-.++|.++++ +-+|| .
T Consensus 69 gr~pviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P-~y~~-~s~~~l~~~f~~ia~a~~----lPiilYn~P~ 137 (292)
T 2ojp_A 69 GRIPVIAG-----TGANATAEAISLTQRFNDSGIVGCLTVTP-YYNR-PSQEGLYQHFKAIAEHTD----LPQILYNVPS 137 (292)
T ss_dssp TSSCEEEE-----CCCSSHHHHHHHHHHTTTSSCSEEEEECC-CSSC-CCHHHHHHHHHHHHTTCS----SCEEEECCHH
T ss_pred CCCcEEEe-----cCCccHHHHHHHHHHHHhcCCCEEEECCC-CCCC-CCHHHHHHHHHHHHHhcC----CCEEEEeCcc
Confidence 35665544 26778888888999999999999955544 3444 356788888888887664 23444 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ .-..-.||=|+|
T Consensus 138 ~tg~~l~~~~~~~La~---~pnivgiK~s~g 165 (292)
T 2ojp_A 138 RTGCDLLPETVGRLAK---VKNIIGIXEATG 165 (292)
T ss_dssp HHSCCCCHHHHHHHHT---STTEEEC-CCSC
T ss_pred hhccCCCHHHHHHHHc---CCCEEEEeCCCC
Confidence 453226676655542 356777887776
No 337
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=40.52 E-value=1.1e+02 Score=27.39 Aligned_cols=87 Identities=6% Similarity=-0.045 Sum_probs=56.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHh----------------h---cC--------ChhHHHHHHHHHHHHhcCCc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLV----------------L---NN--------QWPELFSEVKQMKEKCGEKI 174 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l----------------~---sg--------~~~~v~~Ei~~v~~a~~~~~ 174 (214)
.+.+.-+.+++.+++.|.+-+=+=+....+ . .+ +.+...+=++++++++|+
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~-- 225 (424)
T 3v3w_A 148 KDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGP-- 225 (424)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCS--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCC--
Confidence 457777889999999999887654321000 0 00 012334447888888875
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 175 HMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 175 ~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
-+.+++....=-+.++-.+.++...+.|.+||--+.
T Consensus 226 d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~ 261 (424)
T 3v3w_A 226 DIHLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAV 261 (424)
T ss_dssp SSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS
T ss_pred CCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCC
Confidence 356666655443778777888888889999997543
No 338
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=40.06 E-value=1.5e+02 Score=26.86 Aligned_cols=71 Identities=15% Similarity=0.083 Sum_probs=42.0
Q ss_pred HHCCCCEEEEec---ChhHh-hcCChhHHHHHHHHHHHHh--------------------cCC-ceEEEEEeccCCCCHH
Q psy965 135 AKQKVDEVDIVI---QRSLV-LNNQWPELFSEVKQMKEKC--------------------GEK-IHMKTILAVGELKTSE 189 (214)
Q Consensus 135 i~~GAdEID~Vi---n~~~l-~sg~~~~v~~Ei~~v~~a~--------------------~~~-~~lKvIlEt~~L~t~e 189 (214)
+..-||-||+=+ |..-+ .-.+.+.+.+=+++++++. ..+ ..+|+ .+.+ +++
T Consensus 208 l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi---~pd~-~~~ 283 (415)
T 3i65_A 208 IGRYADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKL---APDL-NQE 283 (415)
T ss_dssp HGGGCSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEE---CSCC-CHH
T ss_pred HHhhCCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhcccccccccccccccCCCCCeEEEEe---cCCC-CHH
Confidence 344477755432 21111 1234566666667777653 122 34676 3456 677
Q ss_pred HHHHHHHHHHHcCCCEEEcC
Q psy965 190 NIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 190 ~i~~A~~ia~~aGaDFIKTS 209 (214)
++...++.+.++|+|.|--+
T Consensus 284 ~i~~iA~~a~~aGaDgIiv~ 303 (415)
T 3i65_A 284 QKKEIADVLLETNIDGMIIS 303 (415)
T ss_dssp HHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHcCCcEEEEe
Confidence 89999999999999998644
No 339
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=39.67 E-value=81 Score=28.00 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=59.1
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
..+++... +|+. +..+.+.-+.+++.+++.|.+-+.+=++. +.-.+-+++++++.|+. +.++++...-
T Consensus 148 ~~v~~~~s-~g~~-~~~~~e~~~~~a~~~~~~G~~~iKlKv~~--------~~d~~~v~avR~a~G~~--~~L~vDaN~~ 215 (400)
T 3mwc_A 148 NYIESGAA-LGIP-EDGRIETLIHQVEESLQEGYRRIKIKIKP--------GWDVEPLQETRRAVGDH--FPLWTDANSS 215 (400)
T ss_dssp SEEEBCEE-ECCC-TTCCHHHHHHHHHHHHHHTCSCEEEECBT--------TBSHHHHHHHHHHHCTT--SCEEEECTTC
T ss_pred CeEEeeEE-eccC-CCCCHHHHHHHHHHHHHcCCCEEEEEeCc--------chHHHHHHHHHHhcCCC--CEEEEeCCCC
Confidence 34555444 3432 11136777889999999999998876532 12245678899988752 4556665433
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 186 KTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
-+.++ .+..+...+.|.+||--.
T Consensus 216 w~~~~-~~~~~~l~~~~i~~iEqP 238 (400)
T 3mwc_A 216 FELDQ-WETFKAMDAAKCLFHEQP 238 (400)
T ss_dssp CCGGG-HHHHHHHGGGCCSCEESC
T ss_pred CCHHH-HHHHHHHHhcCCCEEeCC
Confidence 36666 567777778899998644
No 340
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=39.48 E-value=1.8e+02 Score=24.83 Aligned_cols=98 Identities=8% Similarity=0.007 Sum_probs=63.9
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHh-hcCChhHHHHHHHHHHHHhcCCceEEEEEeccC
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-LNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE 184 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l-~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~ 184 (214)
..++|.+- + |...+..=+..++.|-+.|||-+=++.++-.. ..-.-+.+++-.++|.++++-+..+-=+=-||.
T Consensus 76 grvpviaG-v----g~~~t~~ai~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~ 150 (309)
T 3fkr_A 76 GRVPVIVT-T----SHYSTQVCAARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGT 150 (309)
T ss_dssp TSSCEEEE-C----CCSSHHHHHHHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCC
T ss_pred CCCcEEEe-c----CCchHHHHHHHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 45666555 2 66778888899999999999999877764210 234678899999999998753222211111443
Q ss_pred CCCHHHHHHHHHHHH-HcCCCEEE-cCCC
Q psy965 185 LKTSENIYCASMTAM-FAGSDFIK-TSGS 211 (214)
Q Consensus 185 L~t~e~i~~A~~ia~-~aGaDFIK-TSTG 211 (214)
--+.+.+. +++. --+.-.|| +|+|
T Consensus 151 ~l~~~~~~---~La~~~pnIvgiK~~~~~ 176 (309)
T 3fkr_A 151 ALSAPFLA---RMAREIEQVAYFXIETPG 176 (309)
T ss_dssp CCCHHHHH---HHHHHSTTEEEEEECSSS
T ss_pred CCCHHHHH---HHHhhCCCEEEEECCCcc
Confidence 22556554 4443 35777899 8877
No 341
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=39.46 E-value=46 Score=30.68 Aligned_cols=62 Identities=18% Similarity=0.199 Sum_probs=42.9
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
++.+|...|||-|=+ +... ++ .+++..+.+.++. .-|-+++|+. |.+|..+ |.++|+|+|=+
T Consensus 122 Qi~ea~~~GAD~ILL--i~a~-l~------~~~l~~l~~~a~~-lgm~~LvEvh---~~eE~~~----A~~lga~iIGi 183 (452)
T 1pii_A 122 QIYLARYYQADACLL--MLSV-LD------DDQYRQLAAVAHS-LEMGVLTEVS---NEEEQER----AIALGAKVVGI 183 (452)
T ss_dssp HHHHHHHTTCSEEEE--ETTT-CC------HHHHHHHHHHHHH-TTCEEEEEEC---SHHHHHH----HHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEE--Eccc-CC------HHHHHHHHHHHHH-cCCeEEEEeC---CHHHHHH----HHHCCCCEEEE
Confidence 567788999998544 3332 32 2566666666654 4689999998 6577754 45679999864
No 342
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=39.38 E-value=60 Score=27.81 Aligned_cols=128 Identities=13% Similarity=-0.006 Sum_probs=71.9
Q ss_pred CCCCHHHHHHHHHHhhccCchhhhcccc--ccCcc-cHHHHHHhhhcCCCCCCeEEEecCCCCC--------CCCHHHHH
Q psy965 60 GDDTEAVVETLTLKAIQPLSEELKEKVL--RGFVS-TVWHGSDNLKTKLVYQPCLSQPAGFPSG--------QYLLETRL 128 (214)
Q Consensus 60 ~~~T~~~I~~lc~eA~~~f~~~~~~~~~--cv~P~-~V~~a~~~L~~~gs~v~vatV~igFP~G--------~~~~~~K~ 128 (214)
|..+...++.+++-|-.+.... .-+.+ .++|. .++.-.+..+ ..+|.+++- | +. ++
T Consensus 21 kglg~~~~~d~Le~~g~yID~l-Kfg~Gt~~l~~~~~l~eki~l~~--~~gV~v~~G------GTl~E~~~~qg----~~ 87 (251)
T 1qwg_A 21 KGLPPKFVEDYLKVCGDYIDFV-KFGWGTSAVIDRDVVKEKINYYK--DWGIKVYPG------GTLFEYAYSKG----KF 87 (251)
T ss_dssp SSCCHHHHHHHHHHHGGGCSEE-EECTTGGGGSCHHHHHHHHHHHH--TTTCEEEEC------HHHHHHHHHTT----CH
T ss_pred CCCCHHHHHHHHHHhhhhcceE-EecCceeeecCHHHHHHHHHHHH--HcCCeEECC------cHHHHHHHHcC----cH
Confidence 4567777777777776542200 00011 23443 5555555555 355654433 3 22 22
Q ss_pred HH-HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC-------CCHHHHHHHHHHHHH
Q psy965 129 HE-IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL-------KTSENIYCASMTAMF 200 (214)
Q Consensus 129 ~E-~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L-------~t~e~i~~A~~ia~~ 200 (214)
.+ .++|-+.|-+-|++-- |-.+--.++-..+.+.+.+ .-+||+-|.|.= .+.++..+-.+-..+
T Consensus 88 ~~yl~~~k~lGf~~iEiS~-------G~i~l~~~~~~~~I~~~~~-~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~Le 159 (251)
T 1qwg_A 88 DEFLNECEKLGFEAVEISD-------GSSDISLEERNNAIKRAKD-NGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLD 159 (251)
T ss_dssp HHHHHHHHHHTCCEEEECC-------SSSCCCHHHHHHHHHHHHH-TTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECC-------CcccCCHHHHHHHHHHHHH-CCCEEeeeccccCCcccCCCCHHHHHHHHHHHHH
Confidence 22 5666778999888752 2222223344434433332 348999998863 145777888889999
Q ss_pred cCCCEEEc
Q psy965 201 AGSDFIKT 208 (214)
Q Consensus 201 aGaDFIKT 208 (214)
|||++|=.
T Consensus 160 AGA~~Vii 167 (251)
T 1qwg_A 160 AGADYVII 167 (251)
T ss_dssp HTCSEEEE
T ss_pred CCCcEEEE
Confidence 99999854
No 343
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=39.35 E-value=85 Score=26.93 Aligned_cols=87 Identities=10% Similarity=0.044 Sum_probs=51.0
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL 185 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L 185 (214)
-..|+... +.+ |.+..+ -+..+.+.|+ ++++... .-+.+.+.++++.+++.+..+..+.+++...
T Consensus 11 ~~~Pii~a--pM~-g~s~~~----la~av~~aG~--lG~i~~~----~~~~~~~~~~i~~i~~~~~~p~gvnl~~~~~-- 75 (332)
T 2z6i_A 11 IDYPIFQG--GMA-WVADGD----LAGAVSKAGG--LGIIGGG----NAPKEVVKANIDKIKSLTDKPFGVNIMLLSP-- 75 (332)
T ss_dssp CSSSEEEC--CCT-TTCCHH----HHHHHHHHTS--BEEEECT----TCCHHHHHHHHHHHHHHCCSCEEEEECTTST--
T ss_pred CCCCEEeC--CCC-CCCcHH----HHHHHHhCCC--cEEeCCC----CCCHHHHHHHHHHHHHhcCCCEEEEecCCCC--
Confidence 44554333 444 544332 3344556687 5565322 1256778889999998774323344443211
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 186 KTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 186 ~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
......+.+.++|+|+|-++.|
T Consensus 76 ----~~~~~~~~a~~~g~d~V~~~~g 97 (332)
T 2z6i_A 76 ----FVEDIVDLVIEEGVKVVTTGAG 97 (332)
T ss_dssp ----THHHHHHHHHHTTCSEEEECSS
T ss_pred ----CHHHHHHHHHHCCCCEEEECCC
Confidence 2445677888999999987765
No 344
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=39.20 E-value=38 Score=29.38 Aligned_cols=75 Identities=9% Similarity=0.015 Sum_probs=46.4
Q ss_pred HHHHHHHHCCCCEEEEecChh-Hhhc-------CChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 129 HEIELLAKQKVDEVDIVIQRS-LVLN-------NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~-~l~s-------g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
.+++.+.+.|||-|++- |-+ .... |.-..-.+-+.++++++ .+.||..-|-- +.+.+.+|- .
T Consensus 161 e~A~~a~~aGad~Ivvs-~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~----~ipVIa~GGI~-~g~Dv~kal----a 230 (336)
T 1ypf_A 161 EAVRELENAGADATKVG-IGPGKVCITKIKTGFGTGGWQLAALRWCAKAA----SKPIIADGGIR-TNGDVAKSI----R 230 (336)
T ss_dssp HHHHHHHHHTCSEEEEC-SSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC----SSCEEEESCCC-STHHHHHHH----H
T ss_pred HHHHHHHHcCCCEEEEe-cCCCceeecccccCcCCchhHHHHHHHHHHHc----CCcEEEeCCCC-CHHHHHHHH----H
Confidence 58999999999999883 321 1100 00000234555555544 35677777744 778886654 4
Q ss_pred cCCCEEEcCCCCC
Q psy965 201 AGSDFIKTSGSIQ 213 (214)
Q Consensus 201 aGaDFIKTSTGf~ 213 (214)
.|||+|--+|.|.
T Consensus 231 lGAdaV~iGr~~l 243 (336)
T 1ypf_A 231 FGATMVMIGSLFA 243 (336)
T ss_dssp TTCSEEEESGGGT
T ss_pred cCCCEEEeChhhh
Confidence 6999998887763
No 345
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=39.19 E-value=66 Score=28.31 Aligned_cols=70 Identities=17% Similarity=0.141 Sum_probs=36.7
Q ss_pred HHHHHHHCCCCEEEEecChhHhhc--CChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLN--NQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~s--g~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
.++.+.+.|+|-+- ++...+.. +..+...++|..+++..+ +.||+ +-..+.++ ++.+.++|+|+|+
T Consensus 170 ~a~~~~~agad~i~--i~~~~~~~~~~~~~~~~~~i~~l~~~~~----~pvi~--ggi~t~e~----a~~~~~~Gad~i~ 237 (393)
T 2qr6_A 170 IAPIVIKAGADLLV--IQGTLISAEHVNTGGEALNLKEFIGSLD----VPVIA--GGVNDYTT----ALHMMRTGAVGII 237 (393)
T ss_dssp HHHHHHHTTCSEEE--EECSSCCSSCCCC-----CHHHHHHHCS----SCEEE--ECCCSHHH----HHHHHTTTCSEEE
T ss_pred HHHHHHHCCCCEEE--EeCCccccccCCCcccHHHHHHHHHhcC----CCEEE--CCcCCHHH----HHHHHHcCCCEEE
Confidence 34555678998653 33211100 000112235777777653 34555 22336555 3456689999999
Q ss_pred cCCC
Q psy965 208 TSGS 211 (214)
Q Consensus 208 TSTG 211 (214)
-|+|
T Consensus 238 vg~G 241 (393)
T 2qr6_A 238 VGGG 241 (393)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 9875
No 346
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=39.19 E-value=97 Score=26.63 Aligned_cols=64 Identities=20% Similarity=0.289 Sum_probs=40.0
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.|+++|++.|||-|-+= |. .-+++++.++..++ .++ |.-+|=+ |.+++. -..++|+|||.
T Consensus 206 ~eea~eA~~aGaD~I~ld-~~----------~~~~~k~av~~v~~--~ip-i~AsGGI-t~eni~----~~a~tGvD~Is 266 (286)
T 1x1o_A 206 LEELEEALEAGADLILLD-NF----------PLEALREAVRRVGG--RVP-LEASGNM-TLERAK----AAAEAGVDYVS 266 (286)
T ss_dssp HHHHHHHHHHTCSEEEEE-SC----------CHHHHHHHHHHHTT--SSC-EEEESSC-CHHHHH----HHHHHTCSEEE
T ss_pred HHHHHHHHHcCCCEEEEC-CC----------CHHHHHHHHHHhCC--CCe-EEEEcCC-CHHHHH----HHHHcCCCEEE
Confidence 779999999999764322 32 11334455554543 233 3336668 778874 34578999998
Q ss_pred cCC
Q psy965 208 TSG 210 (214)
Q Consensus 208 TST 210 (214)
++.
T Consensus 267 Vgs 269 (286)
T 1x1o_A 267 VGA 269 (286)
T ss_dssp CTH
T ss_pred EcH
Confidence 754
No 347
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=39.10 E-value=1.4e+02 Score=26.17 Aligned_cols=85 Identities=9% Similarity=0.015 Sum_probs=53.8
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhh----c-----------CC----hhHHHHHHHHHHHHhcCC-ceEEEEE----ecc
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVL----N-----------NQ----WPELFSEVKQMKEKCGEK-IHMKTIL----AVG 183 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~----s-----------g~----~~~v~~Ei~~v~~a~~~~-~~lKvIl----Et~ 183 (214)
+.-|+.|.+.|.|-|++=---|+|+ | |. ...+.+=+.+|++++++. ..+|+=- +-+
T Consensus 155 ~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~ 234 (358)
T 4a3u_A 155 EKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGT 234 (358)
T ss_dssp HHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTB
T ss_pred HHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCC
Confidence 4457889999999999977666655 1 11 124455567888888762 2223211 111
Q ss_pred -CCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 184 -ELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 184 -~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
...+.+....+++...+.|.||+-.|.|.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 264 (358)
T 4a3u_A 235 VDSHPEQVFIPAAKMLSDLDIAFLGMREGA 264 (358)
T ss_dssp CCSSTHHHHHHHHHHHHHHTCSEEEEECCB
T ss_pred cccchHHHHHHHHHhhhccCcccccccccc
Confidence 12133445667788889999999988763
No 348
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=39.03 E-value=1e+02 Score=26.05 Aligned_cols=65 Identities=18% Similarity=0.089 Sum_probs=38.5
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCC-ceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEK-IHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~-~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
.|+++|++.|||-|-+= | ...+ +++.+++..+++ ..+++. -+|=+ |.+++.. ..++|+|+|-
T Consensus 193 ee~~~A~~aGaD~I~ld-~------~~~~----~l~~~v~~l~~~~~~~~i~-AsGGI-~~~ni~~----~~~aGaD~i~ 255 (273)
T 2b7n_A 193 EEAKNAMNAGADIVMCD-N------LSVL----ETKEIAAYRDAHYPFVLLE-ASGNI-SLESINA----YAKSGVDAIS 255 (273)
T ss_dssp HHHHHHHHHTCSEEEEE-T------CCHH----HHHHHHHHHHHHCTTCEEE-EESSC-CTTTHHH----HHTTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEC-C------CCHH----HHHHHHHHhhccCCCcEEE-EECCC-CHHHHHH----HHHcCCcEEE
Confidence 58888999998876431 2 2333 444444333210 124443 45557 7677753 3588999998
Q ss_pred cCC
Q psy965 208 TSG 210 (214)
Q Consensus 208 TST 210 (214)
+|+
T Consensus 256 vGs 258 (273)
T 2b7n_A 256 VGA 258 (273)
T ss_dssp CTH
T ss_pred EcH
Confidence 875
No 349
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=38.43 E-value=1.9e+02 Score=24.69 Aligned_cols=79 Identities=14% Similarity=0.110 Sum_probs=54.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
.+.+.-..+++.+++.|.+-+.+= .| ++.+.-.+=+++++++ ++. +++.+....--+.++..+.++...+.
T Consensus 138 ~~~~~~~~~a~~~~~~Gf~~iKik--~g----~~~~~d~~~v~avr~~-g~~--~~l~vDan~~~~~~~a~~~~~~l~~~ 208 (345)
T 2zad_A 138 DTVENRVKEAKKIFEEGFRVIKIK--VG----ENLKEDIEAVEEIAKV-TRG--AKYIVDANMGYTQKEAVEFARAVYQK 208 (345)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE--CC----SCHHHHHHHHHHHHHH-STT--CEEEEECTTCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCcCEEEEe--ec----CCHHHHHHHHHHHHhh-CCC--CeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 356667789999999999998852 22 1445555667888888 642 45566654333677777777888889
Q ss_pred CCC--EEEcC
Q psy965 202 GSD--FIKTS 209 (214)
Q Consensus 202 GaD--FIKTS 209 (214)
|.+ ||--.
T Consensus 209 ~i~~~~iE~P 218 (345)
T 2zad_A 209 GIDIAVYEQP 218 (345)
T ss_dssp TCCCSEEECC
T ss_pred CCCeeeeeCC
Confidence 999 98643
No 350
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=38.41 E-value=1.6e+02 Score=23.79 Aligned_cols=111 Identities=13% Similarity=-0.079 Sum_probs=61.9
Q ss_pred CcccHHHHHHhhhcCCCCCCeEEEecCCCCC--CCCHH-------HHHHHHHHHHHCCCCEEEEecChhHh------hcC
Q psy965 90 FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSG--QYLLE-------TRLHEIELLAKQKVDEVDIVIQRSLV------LNN 154 (214)
Q Consensus 90 ~P~~V~~a~~~L~~~gs~v~vatV~igFP~G--~~~~~-------~K~~E~~~Ai~~GAdEID~Vin~~~l------~sg 154 (214)
++..+...++.++ ..++.+.++..+||.- ....+ .=..-++.|-+.|++-|=+....+.. ...
T Consensus 62 ~~~~~~~~~~~l~--~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~ 139 (287)
T 3kws_A 62 LAGRVNEIKQALN--GRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTME 139 (287)
T ss_dssp CGGGHHHHHHHHT--TSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHH
T ss_pred hHHHHHHHHHHHH--HcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHH
Confidence 3566777788887 5788887763444421 11221 11234666777899986443322221 112
Q ss_pred ChhHHHHHHHHHHHHhcCCceEEEEEecc------CCCCHHHHHHHHHHHHHcCCCEE
Q psy965 155 QWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 155 ~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~------~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
.|+.+.+-+..+.+.+.. .-+++-+|+- .+.+.++. .+++.+.|.+.+
T Consensus 140 ~~~~~~~~l~~l~~~a~~-~Gv~l~lE~~~~~~~~~~~~~~~~---~~ll~~v~~~~v 193 (287)
T 3kws_A 140 TRDFLCEQFNEMGTFAAQ-HGTSVIFEPLNRKECFYLRQVADA---ASLCRDINNPGV 193 (287)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTCCEEECCCCTTTCSSCCCHHHH---HHHHHHHCCTTE
T ss_pred HHHHHHHHHHHHHHHHHH-cCCEEEEEecCcccCcccCCHHHH---HHHHHHcCCCCe
Confidence 355566666777666654 4589999943 34455554 344444554444
No 351
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=38.14 E-value=1.9e+02 Score=24.65 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=63.0
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhc-CChhHHHHHHHHHHHHhcCCceEEEEE-ecc
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN-NQWPELFSEVKQMKEKCGEKIHMKTIL-AVG 183 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s-g~~~~v~~Ei~~v~~a~~~~~~lKvIl-Et~ 183 (214)
..++|.+- .|...+..-+..++.|.+.|||-+=++.++ +++. -.-+.+++-.++|.++++-+..+-=|= =||
T Consensus 82 gr~pviaG-----vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg 155 (307)
T 3s5o_A 82 KNRLLLAG-----SGCESTQATVEMTVSMAQVGADAAMVVTPC-YYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTG 155 (307)
T ss_dssp TTSEEEEE-----CCCSSHHHHHHHHHHHHHTTCSEEEEECCC-TTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHS
T ss_pred CCCcEEEe-----cCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-cCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccC
Confidence 45554443 266788888899999999999999777655 4442 367889999999988875222111110 134
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 184 ELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 184 ~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
.--+.+.+.+.+ ..-..-.||=|+|
T Consensus 156 ~~l~~~~~~~La---~~pnIvgiKdssg 180 (307)
T 3s5o_A 156 LDLPVDAVVTLS---QHPNIVGMXDSGG 180 (307)
T ss_dssp CCCCHHHHHHHH---TSTTEEEEEECSC
T ss_pred CCCCHHHHHHHh---cCCCEEEEEcCCC
Confidence 322667665544 3456778888876
No 352
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=37.60 E-value=1.9e+02 Score=25.84 Aligned_cols=111 Identities=17% Similarity=0.060 Sum_probs=72.0
Q ss_pred ccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEecChh-Hhhc-------CCh
Q psy965 86 VLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSG-QYLLETRLHEIELLAKQKVDEVDIVIQRS-LVLN-------NQW 156 (214)
Q Consensus 86 ~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G-~~~~~~K~~E~~~Ai~~GAdEID~Vin~~-~l~s-------g~~ 156 (214)
...+||.||.. |.+.+ --+ -+-|-= +.+.+.=+.|++++++.|..-|-+-.-+. ..|+ ..-
T Consensus 36 ~dLI~PlFV~e--------g~~~~-~~I-~SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~~ 105 (337)
T 1w5q_A 36 DDLILPVFVLD--------GVNQR-ESI-PSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPE 105 (337)
T ss_dssp GGEEEEEEEES--------SSSCE-EEC-TTSTTCEEEEHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTT
T ss_pred HHceeeEEEec--------CCCCc-ccc-CCCCCceeeCHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCCC
Confidence 34789999863 33332 222 355632 34577888999999999999888754422 2343 233
Q ss_pred hHHHHHHHHHHHHhcCCceEEEE----------------Ee-ccCCCCHHHHHHHHHHH---HHcCCCEEEcC
Q psy965 157 PELFSEVKQMKEKCGEKIHMKTI----------------LA-VGELKTSENIYCASMTA---MFAGSDFIKTS 209 (214)
Q Consensus 157 ~~v~~Ei~~v~~a~~~~~~lKvI----------------lE-t~~L~t~e~i~~A~~ia---~~aGaDFIKTS 209 (214)
..+.+=|+++++..++ +-|| |+ .|+..+++-+...++.| .+||||.|--|
T Consensus 106 g~v~rair~iK~~~pd---l~vitDvcLc~YT~HGHcGil~~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPS 175 (337)
T 1w5q_A 106 GIAQRATRALRERFPE---LGIITDVCLCEFTTHGQCGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPS 175 (337)
T ss_dssp SHHHHHHHHHHHHCTT---SEEEEEECSTTTBTTCCSSCBCTTSCBCHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred ChHHHHHHHHHHHCCC---eEEEEeeecccCCCCCcceeeCCCCcCccHHHHHHHHHHHHHHHHcCCCeEecc
Confidence 5777889999988764 2233 23 56565677676666655 57999999755
No 353
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.56 E-value=1.6e+02 Score=24.97 Aligned_cols=84 Identities=12% Similarity=0.076 Sum_probs=58.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe----ccCCCCHHHHHHHH
Q psy965 120 GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA----VGELKTSENIYCAS 195 (214)
Q Consensus 120 G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE----t~~L~t~e~i~~A~ 195 (214)
|...+..-+..++.|.+.|||-+=++.++ +.+ -.-+.+++-.++|.++++- ++ +|-. ||.--+.+.+.+.
T Consensus 81 g~~~t~~ai~la~~a~~~Gadavlv~~P~-y~~-~~~~~l~~~f~~va~a~~l--Pi-ilYn~P~~tg~~l~~~~~~~L- 154 (300)
T 3eb2_A 81 ASTSVADAVAQAKLYEKLGADGILAILEA-YFP-LKDAQIESYFRAIADAVEI--PV-VIYTNPQFQRSDLTLDVIARL- 154 (300)
T ss_dssp EESSHHHHHHHHHHHHHHTCSEEEEEECC-SSC-CCHHHHHHHHHHHHHHCSS--CE-EEEECTTTCSSCCCHHHHHHH-
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCC-CCC-CCHHHHHHHHHHHHHHCCC--CE-EEEECccccCCCCCHHHHHHH-
Confidence 56778888999999999999999666554 344 3668899999999988752 22 1233 3322256666544
Q ss_pred HHHHHcCCCEEEcCCC
Q psy965 196 MTAMFAGSDFIKTSGS 211 (214)
Q Consensus 196 ~ia~~aGaDFIKTSTG 211 (214)
+..-..-.||=|+|
T Consensus 155 --a~~pnIvgiKdssg 168 (300)
T 3eb2_A 155 --AEHPRIRYIKDAST 168 (300)
T ss_dssp --HTSTTEEEEEECSS
T ss_pred --HcCCCEEEEEcCCC
Confidence 33457778898887
No 354
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=37.42 E-value=1.9e+02 Score=24.53 Aligned_cols=92 Identities=14% Similarity=0.123 Sum_probs=62.6
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++ +-+|| .
T Consensus 80 grvpViaG-----vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~----lPiilYn~P~ 148 (301)
T 1xky_A 80 KRVPVIAG-----TGSNNTHASIDLTKKATEVGVDAVMLVAPY-YNK-PSQEGMYQHFKAIAESTP----LPVMLYNVPG 148 (301)
T ss_dssp TSSCEEEE-----CCCSCHHHHHHHHHHHHHTTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHTCS----SCEEEEECHH
T ss_pred CCceEEeC-----CCCCCHHHHHHHHHHHHhcCCCEEEEcCCC-CCC-CCHHHHHHHHHHHHHhcC----CCEEEEeCcc
Confidence 35666544 266778888899999999999998777664 334 356888888889988764 23344 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.+ ..-..-.||=|+|
T Consensus 149 ~tg~~l~~~~~~~La---~~pnIvgiKdssg 176 (301)
T 1xky_A 149 RSIVQISVDTVVRLS---EIENIVAIKDAGG 176 (301)
T ss_dssp HHSSCCCHHHHHHHH---TSTTEEEEEECSS
T ss_pred ccCCCCCHHHHHHHH---cCCCEEEEEcCCC
Confidence 44322667665554 2356777888776
No 355
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=37.39 E-value=83 Score=24.98 Aligned_cols=78 Identities=10% Similarity=-0.003 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEE--EeccCCCC---------HHH
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTI--LAVGELKT---------SEN 190 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvI--lEt~~L~t---------~e~ 190 (214)
.+++.. ++.+.+.|.+-|++..+. + -..++.++++++.. .-+++. --.+.+.+ .+.
T Consensus 18 ~~~~~~---l~~~~~~G~~~vEl~~~~--~-------~~~~~~~~~~~l~~-~gl~~~~~~~~~~~~~~d~~~r~~~~~~ 84 (275)
T 3qc0_A 18 CGFAEA---VDICLKHGITAIAPWRDQ--V-------AAIGLGEAGRIVRA-NGLKLTGLCRGGFFPAPDASGREKAIDD 84 (275)
T ss_dssp CCHHHH---HHHHHHTTCCEEECBHHH--H-------HHHCHHHHHHHHHH-HTCEESCEEEEECCCCSSHHHHHHHHHH
T ss_pred CCHHHH---HHHHHHcCCCEEEecccc--c-------cccCHHHHHHHHHH-cCCceEEeecCCCcCCCCHHHHHHHHHH
Confidence 456554 456667899999986531 1 12234444444432 123332 11122322 145
Q ss_pred HHHHHHHHHHcCCCEEEcCCCC
Q psy965 191 IYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 191 i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+.++.++|...|+++|...+|+
T Consensus 85 ~~~~i~~a~~lG~~~v~~~~g~ 106 (275)
T 3qc0_A 85 NRRAVDEAAELGADCLVLVAGG 106 (275)
T ss_dssp HHHHHHHHHHTTCSCEEEECBC
T ss_pred HHHHHHHHHHhCCCEEEEeeCC
Confidence 7788899999999999998874
No 356
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=37.35 E-value=1.2e+02 Score=24.27 Aligned_cols=74 Identities=9% Similarity=0.135 Sum_probs=41.9
Q ss_pred HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC-CceEEEEEecc---CCCC-H--------HHHHHHHHH
Q psy965 131 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIHMKTILAVG---ELKT-S--------ENIYCASMT 197 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~---~L~t-~--------e~i~~A~~i 197 (214)
++.+.+.|.+-|++......-.. + .++.++++.+.. +..+-.+...+ .|.+ + +.+.++.++
T Consensus 23 l~~~~~~G~~~vEl~~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~ 96 (290)
T 2qul_A 23 AKRIAGLGFDLMEISLGEFHNLS---D---AKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDD 96 (290)
T ss_dssp HHHHHHTTCSEEEEESTTGGGSC---H---HHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEecCCccccc---h---hhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 35556789999999865421111 1 344455554432 12233322111 2322 1 557788899
Q ss_pred HHHcCCCEEEcCC
Q psy965 198 AMFAGSDFIKTSG 210 (214)
Q Consensus 198 a~~aGaDFIKTST 210 (214)
|...|+.+|..+.
T Consensus 97 a~~lG~~~v~~~~ 109 (290)
T 2qul_A 97 CHLLGAPVFAGLT 109 (290)
T ss_dssp HHHHTCSEEEEEE
T ss_pred HHHcCCCEEEeec
Confidence 9999999998643
No 357
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=37.11 E-value=1.1e+02 Score=23.75 Aligned_cols=68 Identities=10% Similarity=0.097 Sum_probs=34.9
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.++.+.+.|||-+=+-...+ .+++..+++.++. .-+++-+...-++|.++..+ .+.+.|+||||..
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~----------~~~~~~~~~~~~~-~g~~~gv~~~s~~~p~~~~~---~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSAD----------DSTIAGAVKAAQA-HNKGVVVDLIGIEDKATRAQ---EVRALGAKFVEMH 134 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSC----------HHHHHHHHHHHHH-HTCEEEEECTTCSSHHHHHH---HHHHTTCSEEEEE
T ss_pred HHHHHHhCCCCEEEEeccCC----------hHHHHHHHHHHHH-cCCceEEEEecCCChHHHHH---HHHHhCCCEEEEE
Confidence 46889999998764333221 1234455555532 11333333332334455222 2235599999765
Q ss_pred CC
Q psy965 210 GS 211 (214)
Q Consensus 210 TG 211 (214)
.|
T Consensus 135 ~~ 136 (207)
T 3ajx_A 135 AG 136 (207)
T ss_dssp CC
T ss_pred ec
Confidence 44
No 358
>2ocz_A 3-dehydroquinate dehydratase; structural genomics, DH streptococcus pyogenes, dehydroshikimate, PSI-2, protein ST initiative; HET: MSE; 1.85A {Streptococcus pyogenes serotype M1}
Probab=37.01 E-value=40 Score=27.95 Aligned_cols=71 Identities=14% Similarity=0.071 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHCC-CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC-CHHHHHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQK-VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK-TSENIYCASMTAM 199 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~G-AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~-t~e~i~~A~~ia~ 199 (214)
..-+.++.-.+.+++.| ++-||+=++.. +. +.+..++ . .|||+---... |++++.....-+.
T Consensus 75 ~~~~~~~~ll~~~~~~g~~d~iDvEl~~~-------~~-------~i~~~~~-~-~kvI~S~Hdf~~tp~el~~~~~~~~ 138 (231)
T 2ocz_A 75 LSSQEYVDIIKEINAIYNPDYIDFEYFTH-------KS-------VFQEMLD-F-PNLILSYHNFEETPENLMEAFSEMT 138 (231)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEETTTT-------GG-------GGGGGTT-C-SSEEEEEEESSCCCTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEECCCC-------HH-------HHHHhhc-C-CeEEEEecCCCCCHHHHHHHHHHHH
Confidence 45677888888999998 99999987653 11 1223344 3 88998755431 2356666666777
Q ss_pred HcCCCEEEc
Q psy965 200 FAGSDFIKT 208 (214)
Q Consensus 200 ~aGaDFIKT 208 (214)
..|||.+|=
T Consensus 139 ~~gaDivKi 147 (231)
T 2ocz_A 139 KLAPRVVKI 147 (231)
T ss_dssp HTCCSEEEE
T ss_pred HcCCCEEEE
Confidence 889999984
No 359
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=37.01 E-value=1.6e+02 Score=26.18 Aligned_cols=105 Identities=4% Similarity=-0.122 Sum_probs=64.4
Q ss_pred HhhhcC-CCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhH----h---------h--cC--------
Q psy965 99 DNLKTK-LVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSL----V---------L--NN-------- 154 (214)
Q Consensus 99 ~~L~~~-gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~----l---------~--sg-------- 154 (214)
++|... ...+++-+. ++ ..+.+.-+.+++.+++.|.+-+-+=+.... + . .|
T Consensus 123 ~LLGG~~r~~v~~y~~-~~----~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~ 197 (418)
T 3r4e_A 123 QLLGGRSRDGIMVYGH-AN----GSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGW 197 (418)
T ss_dssp HHHTCCSCSSEEEEEE-EE----ESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEE
T ss_pred HHhCCccCCeeeEEEe-CC----CCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccc
Confidence 456521 134555444 22 345677788999999999999887443210 0 0 00
Q ss_pred ----ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 155 ----QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 155 ----~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+.+...+=++++++++|+. +.+++....=-+.++-.+.++...+.|.+||--..
T Consensus 198 ~~~~~~~~d~~~v~avR~a~G~d--~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~ 255 (418)
T 3r4e_A 198 DTRKALNYVPKLFEELRKTYGFD--HHLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDCT 255 (418)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCSS--SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEESCS
T ss_pred cchhHHHHHHHHHHHHHHHcCCC--CeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCC
Confidence 0233344578888888752 45566654333777777888888889999997543
No 360
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=37.00 E-value=2.1e+02 Score=24.79 Aligned_cols=98 Identities=13% Similarity=0.052 Sum_probs=55.5
Q ss_pred CCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecCh-----hHhhcC---ChhHHHHHHHHHHHHhcCCceE
Q psy965 105 LVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQR-----SLVLNN---QWPELFSEVKQMKEKCGEKIHM 176 (214)
Q Consensus 105 gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~-----~~l~sg---~~~~v~~Ei~~v~~a~~~~~~l 176 (214)
+++++ .+ ++.|+|+...+.-..-++..++.||.-|=+==.. |.+-.+ ..++..+=|++.+++..+ ..+
T Consensus 81 ~~~~P--vi-aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~-~~~ 156 (298)
T 3eoo_A 81 ATNLP--LL-VDIDTGWGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTD-ETF 156 (298)
T ss_dssp HCCSC--EE-EECTTCSSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSS-TTS
T ss_pred hcCCe--EE-EECCCCCCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccC-CCe
Confidence 45555 33 6899998766655666788888999876332111 111111 234555566677766543 356
Q ss_pred EEEEeccCCCC--HHHHHHHHHHHHHcCCCEE
Q psy965 177 KTILAVGELKT--SENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 177 KvIlEt~~L~t--~e~i~~A~~ia~~aGaDFI 206 (214)
.+|-=|..+.. .++..+=++...+||||-|
T Consensus 157 ~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~i 188 (298)
T 3eoo_A 157 VIMARTDAAAAEGIDAAIERAIAYVEAGADMI 188 (298)
T ss_dssp EEEEEECTHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEeehhhhhcCHHHHHHHHHhhHhcCCCEE
Confidence 66666654411 1222222345678999976
No 361
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=36.81 E-value=2e+02 Score=24.49 Aligned_cols=92 Identities=12% Similarity=0.023 Sum_probs=63.3
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++ . -+|| .
T Consensus 84 grvpviaG-----vg~~st~~ai~la~~A~~~Gadavlv~~P~-y~~-~~~~~l~~~f~~ia~a~~--l--PiilYn~P~ 152 (304)
T 3cpr_A 84 DRAKLIAG-----VGTNNTRTSVELAEAAASAGADGLLVVTPY-YSK-PSQEGLLAHFGAIAAATE--V--PICLYDIPG 152 (304)
T ss_dssp TTSEEEEE-----CCCSCHHHHHHHHHHHHHTTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHCC--S--CEEEEECHH
T ss_pred CCCcEEec-----CCCCCHHHHHHHHHHHHhcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhcC--C--CEEEEeCcc
Confidence 45665544 267788888999999999999999777664 334 456889999999998874 2 2333 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ .-..-.||=|+|
T Consensus 153 ~tg~~l~~~~~~~La~---~pnIvgiKdssg 180 (304)
T 3cpr_A 153 RSGIPIESDTMRRLSE---LPTILAVXDAKG 180 (304)
T ss_dssp HHSSCCCHHHHHHHTT---STTEEEEEECSC
T ss_pred ccCcCCCHHHHHHHHc---CCCEEEEecCCC
Confidence 453226676655543 356777888876
No 362
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=36.81 E-value=1.5e+02 Score=25.14 Aligned_cols=92 Identities=15% Similarity=0.107 Sum_probs=51.8
Q ss_pred HHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCH-HHHHHHHHHHHHCCCCEEE
Q psy965 65 AVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLL-ETRLHEIELLAKQKVDEVD 143 (214)
Q Consensus 65 ~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~-~~K~~E~~~Ai~~GAdEID 143 (214)
+.+.++.+.|... . ..+.+| +|.-++..++.+ |.+..+.|--|+ |.|...= -.|+.-.+++++.|||-
T Consensus 144 e~v~~~A~~a~~~-G---~dGvV~-s~~e~~~ir~~~---~~~f~~vtPGIr-~~g~~~gDQ~Rv~T~~~a~~aGad~-- 212 (259)
T 3tfx_A 144 EQVLSLAKMAKHS-G---ADGVIC-SPLEVKKLHENI---GDDFLYVTPGIR-PAGNAKDDQSRVATPKMAKEWGSSA-- 212 (259)
T ss_dssp HHHHHHHHHHHHT-T---CCEEEC-CGGGHHHHHHHH---CSSSEEEECCCC-CC-----------CHHHHHHTTCSE--
T ss_pred HHHHHHHHHHHHh-C---CCEEEE-CHHHHHHHHhhc---CCccEEEcCCcC-CCCCCcCCccccCCHHHHHHcCCCE--
Confidence 3445566666541 0 012345 477787777766 345444333245 4554322 23345577889999996
Q ss_pred EecChhHhhcCChhHHHHHHHHHH
Q psy965 144 IVIQRSLVLNNQWPELFSEVKQMK 167 (214)
Q Consensus 144 ~Vin~~~l~sg~~~~v~~Ei~~v~ 167 (214)
+|+=++-+.+.|.....++|+.-.
T Consensus 213 iVvGr~I~~a~dp~~a~~~i~~~~ 236 (259)
T 3tfx_A 213 IVVGRPITLASDPKAAYEAIKKEF 236 (259)
T ss_dssp EEECHHHHTSSSHHHHHHHHHHHH
T ss_pred EEEChHHhCCCCHHHHHHHHHHHH
Confidence 788888899888877776666544
No 363
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=36.71 E-value=60 Score=25.82 Aligned_cols=74 Identities=20% Similarity=0.127 Sum_probs=41.4
Q ss_pred HHHHHHHHHCCCCEEEEecCh--hHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCE
Q psy965 128 LHEIELLAKQKVDEVDIVIQR--SLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~--~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDF 205 (214)
..|++.+.+.|||-|=+ -++ +.-+.|....-.+.++++++.. .+.+|..-| + +.+++.++ +++|+|.
T Consensus 120 ~~~~~~a~~~gaD~i~~-~~~f~~~~~~g~~~~~~~~l~~~~~~~----~~pvia~GG-I-~~~nv~~~----~~~Ga~g 188 (221)
T 1yad_A 120 LEEAVQAEKEDADYVLF-GHVFETDCKKGLEGRGVSLLSDIKQRI----SIPVIAIGG-M-TPDRLRDV----KQAGADG 188 (221)
T ss_dssp HHHHHHHHHTTCSEEEE-ECCC----------CHHHHHHHHHHHC----CSCEEEESS-C-CGGGHHHH----HHTTCSE
T ss_pred HHHHHHHHhCCCCEEEE-CCccccCCCCCCCCCCHHHHHHHHHhC----CCCEEEECC-C-CHHHHHHH----HHcCCCE
Confidence 35788899999987733 222 1112121111124455555443 245666666 6 77888654 3489999
Q ss_pred EEcCCCC
Q psy965 206 IKTSGSI 212 (214)
Q Consensus 206 IKTSTGf 212 (214)
|=-++++
T Consensus 189 v~vgs~i 195 (221)
T 1yad_A 189 IAVMSGI 195 (221)
T ss_dssp EEESHHH
T ss_pred EEEhHHh
Confidence 9877764
No 364
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=36.54 E-value=1.3e+02 Score=26.89 Aligned_cols=86 Identities=13% Similarity=0.035 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHh-----------hcCC-------hhHHHHHHHHHHHHhcCCceEEEEEecc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLV-----------LNNQ-------WPELFSEVKQMKEKCGEKIHMKTILAVG 183 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l-----------~sg~-------~~~v~~Ei~~v~~a~~~~~~lKvIlEt~ 183 (214)
.+.+.-+.+++.+++.|.+-+-+=+-.... ..|. .+...+=+++++++.|+ -+.+++...
T Consensus 153 ~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~--d~~L~vDaN 230 (422)
T 3tji_A 153 ETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGW--KLHILHDVH 230 (422)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCS--SSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCC--CCEEEEECC
Confidence 567778889999999999988764421100 0111 12333446788888875 356666665
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 184 ELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 184 ~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.=-+.++..+.++...+.|.+||--+
T Consensus 231 ~~~~~~~A~~~~~~Le~~~i~~iEqP 256 (422)
T 3tji_A 231 ERLFPQQAVQLAKQLEPFQPYFIEDI 256 (422)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSEEECC
T ss_pred CCCCHHHHHHHHHHHHhhCCCeEECC
Confidence 43377777777777788899999754
No 365
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=36.32 E-value=52 Score=26.88 Aligned_cols=96 Identities=17% Similarity=0.145 Sum_probs=61.3
Q ss_pred cccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEe-cChhHhhcCChhHHHHHHHHHHHH
Q psy965 91 VSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIV-IQRSLVLNNQWPELFSEVKQMKEK 169 (214)
Q Consensus 91 P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~V-in~~~l~sg~~~~v~~Ei~~v~~a 169 (214)
+..+....+.|++ .+++++-= +|-.|.+++.. ..... +|+| ||.+.+..-.-+.-..-+..+...
T Consensus 152 ~~~~~~~l~~L~~--~G~~ialD--DfG~g~ssl~~-------L~~l~---~d~iKiD~~~v~~~~~~~~~~~l~~ii~~ 217 (268)
T 3hv8_A 152 LKQAKQLTQGLAT--LHCQAAIS--QFGCSLNPFNA-------LKHLT---VQFIKIDGSFVQDLNQVENQEILKGLIAE 217 (268)
T ss_dssp HHHHHHHHHHHHH--TTCEEEEE--EETCSSSTTGG-------GGTCC---CSEEEECGGGGSSTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--CCCEEEEe--CCCCChHHHHH-------HHhCC---CCEEEECHHHHHhhhcChhHHHHHHHHHH
Confidence 3445555666773 56765543 88888887653 22233 4544 788777654444555667777777
Q ss_pred hcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 170 CGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 170 ~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
|+. ..++||.| | ..|.++.. .+.+.|+||+.
T Consensus 218 ~~~-~~~~viae-G-VEt~~~~~----~l~~lG~~~~Q 248 (268)
T 3hv8_A 218 LHE-QQKLSIVP-F-VESASVLA----TLWQAGATYIQ 248 (268)
T ss_dssp HHH-TTCEEEEC-C-CCSHHHHH----HHHHHTCSEEC
T ss_pred HHH-cCCCEEEE-e-eCCHHHHH----HHHHcCCCEec
Confidence 765 56899998 6 65766653 45567999975
No 366
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=35.94 E-value=1.2e+02 Score=26.72 Aligned_cols=87 Identities=11% Similarity=0.026 Sum_probs=57.0
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHh-----------hcCC-------hhHHHHHHHHHHHHhcCCceEEEEEecc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLV-----------LNNQ-------WPELFSEVKQMKEKCGEKIHMKTILAVG 183 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l-----------~sg~-------~~~v~~Ei~~v~~a~~~~~~lKvIlEt~ 183 (214)
.+.+.-+.+++.+++.|.+-+-+=+-.... ..|. .+...+=++++++++|+ -+.+++...
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~--d~~l~vDan 209 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGN--QFHILHDVH 209 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTT--SSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCC--CCEEEEECC
Confidence 567788889999999999988764421100 0010 12334446788888875 356666655
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 184 ELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 184 ~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.=-+.++-.+.++...+.|.+||--+.
T Consensus 210 ~~~~~~~A~~~~~~L~~~~i~~iEqP~ 236 (401)
T 3sbf_A 210 ERLFPNQAIQFAKEVEQYKPYFIEDIL 236 (401)
T ss_dssp TCSCHHHHHHHHHHHGGGCCSCEECSS
T ss_pred CCCCHHHHHHHHHHHHhcCCCEEECCC
Confidence 433777777777777888999987543
No 367
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=35.78 E-value=1.2e+02 Score=26.31 Aligned_cols=86 Identities=12% Similarity=0.063 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhcCCceEEEE-Eecc----------CCCC-
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEKIHMKTI-LAVG----------ELKT- 187 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~----------~L~t- 187 (214)
..+++.++..+ .+.|.+-|++. +....-.+ ......+++..+++.+.. .-|++. +-++ .|.+
T Consensus 32 ~~~~~e~l~~a---a~~G~~~vEl~-~~~~~p~~~~~~e~~~~~~~l~~~l~~-~GL~i~~~~~~~~~~p~~~~g~l~~~ 106 (387)
T 1bxb_A 32 RLDPVYVVHKL---AELGAYGVNLH-DEDLIPRGTPPQERDQIVRRFKKALDE-TGLKVPMVTANLFSDPAFKDGAFTSP 106 (387)
T ss_dssp CCCHHHHHHHH---HHHTCSEEEEE-HHHHSCTTCCTTHHHHHHHHHHHHHHH-HTCBCCEEECCCSSSGGGGGCSTTCS
T ss_pred CCCHHHHHHHH---HHhCCCEEEec-CcccCCCCCChhhhHHHHHHHHHHHHH-hCCEEEEEecCCCCCccccCCCCCCC
Confidence 45666665544 45699999986 11111111 111113445555555433 224543 3322 2332
Q ss_pred H--------HHHHHHHHHHHHcCCCEEEcCCC
Q psy965 188 S--------ENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 188 ~--------e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+ +.+.++.++|.+.|+.+|..-+|
T Consensus 107 d~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G 138 (387)
T 1bxb_A 107 DPWVRAYALRKSLETMDLGAELGAEIYVVWPG 138 (387)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCCEEEECCT
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCEEEECCC
Confidence 2 34567888999999999988776
No 368
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=35.78 E-value=1.2e+02 Score=23.99 Aligned_cols=71 Identities=10% Similarity=0.128 Sum_probs=42.6
Q ss_pred HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccC----CCC---------HHHHHHHHHH
Q psy965 131 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE----LKT---------SENIYCASMT 197 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~----L~t---------~e~i~~A~~i 197 (214)
++.+.+.|.+ |++..+...+ +.. .+++++++..+ + .+- +-.++ +.+ .+.+.++.++
T Consensus 16 l~~~~~~G~~-vEl~~~~~~~---~~~---~~~~~~~~~~~-~-~~~--~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~~ 84 (254)
T 3ayv_A 16 LPRLQALGLG-AEVYLDPALL---EED---ALFQSLRRRFS-G-KLS--VHLPFWNLDLLSPDPEVRGLTLRRLLFGLDR 84 (254)
T ss_dssp HHHHHHHTCE-EEEECCGGGT---TCH---HHHHHHHHHCC-S-CEE--EECCCTTCCTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCC-EEEecccccc---CcH---HHHHHHHHHhC-C-CeE--EecCccCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4566678999 8885553211 111 16777776664 2 222 22332 222 1346678888
Q ss_pred HHHcCCCEEEcCCCC
Q psy965 198 AMFAGSDFIKTSGSI 212 (214)
Q Consensus 198 a~~aGaDFIKTSTGf 212 (214)
|...|+++|...+|+
T Consensus 85 A~~lGa~~v~~~~g~ 99 (254)
T 3ayv_A 85 AAELGADRAVFHSGI 99 (254)
T ss_dssp HHHTTCSEEEEECCC
T ss_pred HHHhCCCEEEECCCC
Confidence 999999999887775
No 369
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=35.71 E-value=1.6e+02 Score=23.10 Aligned_cols=73 Identities=15% Similarity=0.110 Sum_probs=43.0
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhc---CC-hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLN---NQ-WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~s---g~-~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
..|++.+.+.|+|-|- +-+.+.--. ++ ...-.+.++++++.. .+.||.+-| ..+.+++.++ .++|+
T Consensus 129 ~~e~~~~~~~G~d~i~-~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~----~ipvia~GG-I~~~~~~~~~----~~~Ga 198 (223)
T 1y0e_A 129 VEEAKNAARLGFDYIG-TTLHGYTSYTQGQLLYQNDFQFLKDVLQSV----DAKVIAEGN-VITPDMYKRV----MDLGV 198 (223)
T ss_dssp HHHHHHHHHTTCSEEE-CTTTTSSTTSTTCCTTHHHHHHHHHHHHHC----CSEEEEESS-CCSHHHHHHH----HHTTC
T ss_pred HHHHHHHHHcCCCEEE-eCCCcCcCCCCCCCCCcccHHHHHHHHhhC----CCCEEEecC-CCCHHHHHHH----HHcCC
Confidence 4477889999998763 234332111 11 222234556666543 367777777 5477777554 35699
Q ss_pred CEEEcCC
Q psy965 204 DFIKTSG 210 (214)
Q Consensus 204 DFIKTST 210 (214)
|+|=-+|
T Consensus 199 d~v~vG~ 205 (223)
T 1y0e_A 199 HCSVVGG 205 (223)
T ss_dssp SEEEECH
T ss_pred CEEEECh
Confidence 9986654
No 370
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=35.61 E-value=2.1e+02 Score=24.38 Aligned_cols=93 Identities=14% Similarity=0.088 Sum_probs=63.0
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++ +-+|| .
T Consensus 80 grvpViaG-----vg~~st~~ai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~----lPiilYn~P~ 148 (306)
T 1o5k_A 80 GKIPVIVG-----AGTNSTEKTLKLVKQAEKLGANGVLVVTPY-YNK-PTQEGLYQHYKYISERTD----LGIVVYNVPG 148 (306)
T ss_dssp TSSCEEEE-----CCCSCHHHHHHHHHHHHHHTCSEEEEECCC-SSC-CCHHHHHHHHHHHHTTCS----SCEEEEECHH
T ss_pred CCCeEEEc-----CCCccHHHHHHHHHHHHhcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhCC----CCEEEEeCcc
Confidence 35666544 267788888999999999999998777654 344 356888888888887664 23444 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ ..-..-.||=|+|
T Consensus 149 ~tg~~l~~~~~~~La~--~~pnIvgiKdssg 177 (306)
T 1o5k_A 149 RTGVNVLPETAARIAA--DLKNVVGIXEANP 177 (306)
T ss_dssp HHSCCCCHHHHHHHHH--HCTTEEEEEECCC
T ss_pred ccCcCCCHHHHHHHHH--hCCCEEEEeCCCC
Confidence 453226677765541 2356778888876
No 371
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=35.48 E-value=33 Score=29.57 Aligned_cols=65 Identities=12% Similarity=0.187 Sum_probs=38.5
Q ss_pred CCCEEEEecChh--HhhcCC--hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 138 KVDEVDIVIQRS--LVLNNQ--WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 138 GAdEID~Vin~~--~l~sg~--~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
|++-+.+=+|.+ .+..|+ |..+.+.++++++ .+-+..+|.| ..| + +.+. ++.+.++|+|+|.-|.
T Consensus 145 ~~~a~~i~~n~~~~~~~~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v-~~g-~-~~e~----a~~~~~~G~d~I~vs~ 213 (332)
T 1vcf_A 145 EADALAFHVNPLQEAVQRGDTDFRGLVERLAELLP-LPFPVMVKEV-GHG-L-SREA----ALALRDLPLAAVDVAG 213 (332)
T ss_dssp TCSEEEEECCHHHHHHTTSCCCCTTHHHHHHHHCS-CSSCEEEECS-SSC-C-CHHH----HHHHTTSCCSEEECCC
T ss_pred CCCceeeccchHHHHhcCCCccHHHHHHHHHHHHc-CCCCEEEEec-CCC-C-CHHH----HHHHHHcCCCEEEeCC
Confidence 565433334542 222333 3346778888888 6544667742 333 4 5444 4578899999998764
No 372
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=35.07 E-value=60 Score=28.91 Aligned_cols=41 Identities=24% Similarity=0.218 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 159 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 159 v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
..++|+.+++..+.+..+|-+ + +.+. ++.+.++|+|+|-.|
T Consensus 205 ~w~~i~~lr~~~~~PvivK~v-----~-~~e~----A~~a~~~GaD~I~vs 245 (352)
T 3sgz_A 205 CWNDLSLLQSITRLPIILKGI-----L-TKED----AELAMKHNVQGIVVS 245 (352)
T ss_dssp CHHHHHHHHHHCCSCEEEEEE-----C-SHHH----HHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHhcCCCEEEEec-----C-cHHH----HHHHHHcCCCEEEEe
Confidence 345788888887655788977 3 4333 567889999999865
No 373
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=34.96 E-value=1.1e+02 Score=26.81 Aligned_cols=83 Identities=8% Similarity=-0.079 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhHhhcC---ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSLVLNN---QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg---~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
+.-..+++.+++.|.+-+-+=+..+..... +.+...+=++++++++++ -+.+++....--+.++..+.++...+.
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g~--d~~l~vDan~~~~~~~ai~~~~~l~~~ 227 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAGP--AGKIMIDANNAYNLNLTKEVLAALSDV 227 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHCT--TCCEEEECTTCCCHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 666788999999998887764433211111 223444556777787865 245666654333777766777777778
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|.+||--.
T Consensus 228 ~i~~iE~P 235 (392)
T 3p3b_A 228 NLYWLEEA 235 (392)
T ss_dssp CEEEEECS
T ss_pred CCCEEecC
Confidence 88888643
No 374
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=34.91 E-value=80 Score=25.35 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=42.5
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEec--cCCC---CH-HHHHHHHHHHHHcCC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAV--GELK---TS-ENIYCASMTAMFAGS 203 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt--~~L~---t~-e~i~~A~~ia~~aGa 203 (214)
-++.+.+.|.+-|++.... +.. .+ -.+++++..+..+ |++..-. .... .. +.+.++.+.|...|+
T Consensus 28 ~l~~a~~~G~~~vEl~~~~--~~~--~~-~~~~~~~~l~~~g----l~i~~~~~~~~~~~~~~~~~~~~~~i~~A~~lGa 98 (264)
T 1yx1_A 28 FLPLLAMAGAQRVELREEL--FAG--PP-DTEALTAAIQLQG----LECVFSSPLELWREDGQLNPELEPTLRRAEACGA 98 (264)
T ss_dssp GHHHHHHHTCSEEEEEGGG--CSS--CC-CHHHHHHHHHHTT----CEEEEEEEEEEECTTSSBCTTHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEEEHHh--cCC--CH-HHHHHHHHHHHcC----CEEEEecchhhcCCchhHHHHHHHHHHHHHHcCC
Confidence 3566778899999987541 121 11 2334444333322 3332211 1111 22 667888999999999
Q ss_pred CEEEcCCCC
Q psy965 204 DFIKTSGSI 212 (214)
Q Consensus 204 DFIKTSTGf 212 (214)
.+|.+.+|.
T Consensus 99 ~~v~~~~g~ 107 (264)
T 1yx1_A 99 GWLKVSLGL 107 (264)
T ss_dssp SEEEEEEEC
T ss_pred CEEEEecCC
Confidence 999888774
No 375
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=34.71 E-value=1.1e+02 Score=24.53 Aligned_cols=78 Identities=15% Similarity=0.215 Sum_probs=42.9
Q ss_pred CCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCC
Q psy965 108 QPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKT 187 (214)
Q Consensus 108 v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t 187 (214)
.++..| +........ +.-++.+++.|++-|.+-. ++.+.. +.++.+++ ++ +.+-.-| .+ +
T Consensus 13 ~~ii~v-i~~~~~~~~----~~~~~~l~~gGv~~iel~~-----k~~~~~---~~i~~~~~--~~---~~~gag~-vl-~ 72 (207)
T 2yw3_A 13 SRLLPL-LTVRGGEDL----LGLARVLEEEGVGALEITL-----RTEKGL---EALKALRK--SG---LLLGAGT-VR-S 72 (207)
T ss_dssp HCEEEE-ECCCSCCCH----HHHHHHHHHTTCCEEEEEC-----SSTHHH---HHHHHHTT--SS---CEEEEES-CC-S
T ss_pred CCEEEE-EeCCCHHHH----HHHHHHHHHcCCCEEEEeC-----CChHHH---HHHHHHhC--CC---CEEEeCe-Ee-e
Confidence 356666 344333221 3346778889999877653 333332 34444443 32 2222233 33 5
Q ss_pred HHHHHHHHHHHHHcCCCEEEcC
Q psy965 188 SENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 188 ~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.++ .++|+++|||||-++
T Consensus 73 ~d~----~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 73 PKE----AEAALEAGAAFLVSP 90 (207)
T ss_dssp HHH----HHHHHHHTCSEEEES
T ss_pred HHH----HHHHHHcCCCEEEcC
Confidence 444 468889999999755
No 376
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=34.68 E-value=13 Score=31.48 Aligned_cols=26 Identities=8% Similarity=-0.047 Sum_probs=12.0
Q ss_pred CcccHHHHHHhhhcCCCCCCeEEEecCCCCC
Q psy965 90 FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSG 120 (214)
Q Consensus 90 ~P~~V~~a~~~L~~~gs~v~vatV~igFP~G 120 (214)
||..-... +.|.. ++..+..+ |.|..
T Consensus 22 ~p~~~~~~-~~l~~--~Gad~iel--g~pr~ 47 (264)
T 1xm3_A 22 YPSFDIQK-EAVAV--SESDILTF--AVRRM 47 (264)
T ss_dssp SSCHHHHH-HHHHH--HTCSEEEE--ETTSS
T ss_pred CCCHHHHH-HHHHH--cCCeEEEE--ccccc
Confidence 56554443 34442 23444444 66744
No 377
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=34.67 E-value=1.3e+02 Score=24.16 Aligned_cols=70 Identities=14% Similarity=0.264 Sum_probs=38.4
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
-++.+.+.||+.|-++ +...-.. ......+.++++++. ..+.+|+-.+ +.+.+.+. .+.++|+|.|--+
T Consensus 36 ~a~~~~~~Gad~i~v~-d~~~~~~-~~~~~~~~i~~i~~~----~~iPvi~~Gg-i~~~~~~~----~~~~~Gad~V~lg 104 (252)
T 1ka9_F 36 AARAYDEAGADELVFL-DISATHE-ERAILLDVVARVAER----VFIPLTVGGG-VRSLEDAR----KLLLSGADKVSVN 104 (252)
T ss_dssp HHHHHHHHTCSCEEEE-ECCSSTT-CHHHHHHHHHHHHTT----CCSCEEEESS-CCSHHHHH----HHHHHTCSEEEEC
T ss_pred HHHHHHHcCCCEEEEE-cCCcccc-CccccHHHHHHHHHh----CCCCEEEECC-cCCHHHHH----HHHHcCCCEEEEC
Confidence 4566677899988666 4332111 112233445555433 3356777555 54766554 4445689988544
Q ss_pred C
Q psy965 210 G 210 (214)
Q Consensus 210 T 210 (214)
+
T Consensus 105 ~ 105 (252)
T 1ka9_F 105 S 105 (252)
T ss_dssp H
T ss_pred h
Confidence 3
No 378
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=34.58 E-value=2.1e+02 Score=25.11 Aligned_cols=79 Identities=8% Similarity=-0.048 Sum_probs=53.3
Q ss_pred HHHHHHHHHHCCCCEEEE-ecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC-CHHHHHHHHHHHHHcCCC
Q psy965 127 RLHEIELLAKQKVDEVDI-VIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK-TSENIYCASMTAMFAGSD 204 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~-Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~-t~e~i~~A~~ia~~aGaD 204 (214)
-..+++.+++.|.+-+=+ -+..+ ..+.+.-.+=++++++++|+. +.+.+....=- +.++-.+.++...+.|.+
T Consensus 161 ~~~~a~~~~~~G~~~~K~~k~g~~---~~~~~~d~e~v~avR~a~G~d--~~l~vDaN~~~~~~~~A~~~~~~L~~~~i~ 235 (394)
T 3mkc_A 161 YAPLLEKAKAHNIRAVKVCVPIKA---DWSTKEVAYYLRELRGILGHD--TDMMVDYLYRFTDWYEVARLLNSIEDLELY 235 (394)
T ss_dssp HHHHHHHHHHTTCSEEEEECCTTC---CCCHHHHHHHHHHHHHHHCSS--SEEEEECTTCCCCHHHHHHHHHHTGGGCCS
T ss_pred HHHHHHHHHHcCCCEEEeCccCCC---ccCHHHHHHHHHHHHHHhCCC--CeEEEeCCCCCCCHHHHHHHHHHhhhcCCe
Confidence 345788899999998876 33210 024555666688889988752 45666655433 667766777777788999
Q ss_pred EEEcCC
Q psy965 205 FIKTSG 210 (214)
Q Consensus 205 FIKTST 210 (214)
||--+.
T Consensus 236 ~iEeP~ 241 (394)
T 3mkc_A 236 FAEATL 241 (394)
T ss_dssp EEESCS
T ss_pred EEECCC
Confidence 997543
No 379
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=34.48 E-value=1.8e+02 Score=25.83 Aligned_cols=79 Identities=8% Similarity=0.085 Sum_probs=52.6
Q ss_pred HHHHHHHHCCCCEEEE-ecChhHhhcCC------hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 129 HEIELLAKQKVDEVDI-VIQRSLVLNNQ------WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~-Vin~~~l~sg~------~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
..++.+++.|.+-+=+ .+.....|-|. .+.-.+=++++++++++ -+.+++....--+.++-.+.++...+.
T Consensus 162 ~~a~~~~~~G~~~~K~~~~~~~~~K~G~~~~~~~~~~d~e~v~avR~a~g~--d~~l~vDaN~~~~~~~A~~~~~~L~~~ 239 (410)
T 3dip_A 162 VLAESLVAEGYAAMKIWPFDDFASITPHHISLTDLKDGLEPFRKIRAAVGQ--RIEIMCELHSLWGTHAAARICNALADY 239 (410)
T ss_dssp HHHHHHHHTTCSEEEECTTHHHHTTCTTCCCHHHHHHHHHHHHHHHHHHTT--SSEEEEECTTCBCHHHHHHHHHHGGGG
T ss_pred HHHHHHHHcCCCEEEECCccCccccccCcCCHHHHHHHHHHHHHHHHHcCC--CceEEEECCCCCCHHHHHHHHHHHHhc
Confidence 4567889999998876 33333234442 23444557788888875 356667765444777777777777788
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|.+||--+
T Consensus 240 ~i~~iEqP 247 (410)
T 3dip_A 240 GVLWVEDP 247 (410)
T ss_dssp TCSEEECC
T ss_pred CCCEEECC
Confidence 99999754
No 380
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=34.37 E-value=1.1e+02 Score=27.30 Aligned_cols=87 Identities=8% Similarity=-0.082 Sum_probs=56.6
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhH-----------h---h-----cC--C------hhHHHHHHHHHHHHhcCCc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSL-----------V---L-----NN--Q------WPELFSEVKQMKEKCGEKI 174 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~-----------l---~-----sg--~------~~~v~~Ei~~v~~a~~~~~ 174 (214)
.+.+.-+.+++.+++.|.+-+=+=+.... . - -+ . .+...+=++++++++|+.
T Consensus 149 ~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~a~G~d- 227 (425)
T 3vcn_A 149 ETIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLFERAREVLGWD- 227 (425)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHHHHHHHHHCSS-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHHHHHHHHcCCC-
Confidence 46777788999999999988765432100 0 0 00 0 123345578888888752
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 175 HMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 175 ~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+.+++....=-+.++-.+.++...+.|.+||--+.
T Consensus 228 -~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~ 262 (425)
T 3vcn_A 228 -VHLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSV 262 (425)
T ss_dssp -SEEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCS
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCC
Confidence 45566655433778777888888889999997543
No 381
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=34.29 E-value=1.1e+02 Score=28.93 Aligned_cols=100 Identities=16% Similarity=0.092 Sum_probs=57.0
Q ss_pred CCCCeEEEecC-----CCCC-CC--CHHHHHHHHHHHHHCC-----CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC
Q psy965 106 VYQPCLSQPAG-----FPSG-QY--LLETRLHEIELLAKQK-----VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE 172 (214)
Q Consensus 106 s~v~vatV~ig-----FP~G-~~--~~~~K~~E~~~Ai~~G-----AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~ 172 (214)
+...|-++ ++ |=-| .. ..+.-+..+++.++.| |+-||+=---..--+ ..-...+|+..++-....
T Consensus 223 ~~~~iMGI-lNvTPDSFsDGG~~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa-~~vs~eEEl~RvvpvI~~ 300 (545)
T 2bmb_A 223 SPTYIMAI-FNATPDSFSDGGEHFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNS-IQASEEEEIRRSIPLIKA 300 (545)
T ss_dssp SCCEEEEE-EECSCSSTTTTTTTTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTC-CCCCHHHHHHHHHHHHHH
T ss_pred CCCeEEEE-EeCCCCCCcCCCcCcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCC-CCCCHHHHHHHHHHHHHH
Confidence 44566666 44 4434 33 5788899999999999 999998732111101 111235555554332211
Q ss_pred ------CceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 173 ------KIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 173 ------~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+...++.|-..-. . - +..+.|.++|||.|.-=+|+
T Consensus 301 i~~~~~~~~~~vpISIDT~-~-a---~VaeaAl~aGadIINDVsg~ 341 (545)
T 2bmb_A 301 IRESTELPQDKVILSIDTY-R-S---NVAKEAIKVGVDIINDISGG 341 (545)
T ss_dssp HHHCSSSCGGGEEEEEECC-C-H---HHHHHHHHTTCCEEEETTTT
T ss_pred HHhhccccCCCCeEEEeCC-c-H---HHHHHHHHcCCCEEEeCCCC
Confidence 0112555555433 2 2 44567778899999966664
No 382
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=34.15 E-value=24 Score=28.94 Aligned_cols=94 Identities=19% Similarity=0.227 Sum_probs=51.2
Q ss_pred ccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHH
Q psy965 88 RGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMK 167 (214)
Q Consensus 88 cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~ 167 (214)
...+.-++.|++. ++ -++--.|=.-...++.-+..+ -+...|-+++- .|-...+. ++++
T Consensus 88 sTk~~~i~~Ak~~------gL--~tIqR~FliDS~al~~~~~~i---~~~~PD~iEiL-------PGi~p~iI---~~i~ 146 (192)
T 3kts_A 88 STRGNAIMKAKQH------KM--LAIQRLFMIDSSAYNKGVALI---QKVQPDCIELL-------PGIIPEQV---QKMT 146 (192)
T ss_dssp ESCHHHHHHHHHT------TC--EEEEEEECCSHHHHHHHHHHH---HHHCCSEEEEE-------CTTCHHHH---HHHH
T ss_pred eCcHHHHHHHHHC------CC--eEEEEEEEEEcchHHHHHHHH---hhcCCCEEEEC-------CchhHHHH---HHHH
Confidence 4467777777652 23 222234533333333333222 22355555544 44333344 4444
Q ss_pred HHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 168 EKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 168 ~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+..+ . =|+--|...+.|++. .|..||||.|-||+-
T Consensus 147 ~~~~--~---PiIaGGlI~~~edv~----~al~aGA~aVsTs~~ 181 (192)
T 3kts_A 147 QKLH--I---PVIAGGLIETSEQVN----QVIASGAIAVTTSNK 181 (192)
T ss_dssp HHHC--C---CEEEESSCCSHHHHH----HHHTTTEEEEEECCG
T ss_pred HhcC--C---CEEEECCcCCHHHHH----HHHHcCCeEEEeCCH
Confidence 4333 2 267788898877764 667999999999984
No 383
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=34.08 E-value=93 Score=28.78 Aligned_cols=127 Identities=12% Similarity=0.005 Sum_probs=72.8
Q ss_pred CCCCCCCHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHH
Q psy965 57 TLSGDDTEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAK 136 (214)
Q Consensus 57 lL~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~ 136 (214)
.+.++.|.++++++-+-.. ..+++|..-..+.+.|++ ..+++... ..||.|...+..=+.++.+...
T Consensus 267 ~~~gg~~~~ei~~~~~A~~----------niv~~~~~~~~~A~~Le~-r~GiP~i~--~~~PiG~~~T~~~L~~la~~~g 333 (519)
T 1qgu_B 267 MYSGGTTQQEMKEAPDAID----------TLLLQPWQLLKSKKVVQE-MWNQPATE--VAIPLGLAATDELLMTVSQLSG 333 (519)
T ss_dssp SCCCCBCHHHHHHGGGEEE----------EEESSTTTCHHHHHHHHH-TSCCCCCC--CCCCBSHHHHHHHHHHHHHHHC
T ss_pred ccCCCCCHHHHHhhhcCCE----------EEEECHHHHHHHHHHHHH-HcCCCeEe--cCCCcchHHHHHHHHHHHHHHC
Confidence 3445689999988633222 235577665667777875 34666544 3799999999888888877664
Q ss_pred CCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 137 QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 137 ~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.-+. .........+.+.+...+...++ + ||.|-. +.....-.++...+.|..=+-..|++
T Consensus 334 ~~~~---------~~i~~er~~~~~~l~d~~~~l~G-k--rv~i~g----d~~~~~~la~~L~ElGm~vv~v~~~~ 393 (519)
T 1qgu_B 334 KPIA---------DALTLERGRLVDMMLDSHTWLHG-K--KFGLYG----DPDFVMGLTRFLLELGCEPTVILSHN 393 (519)
T ss_dssp CCCC---------HHHHHHHHHHHHHHHHHHHHHTT-C--EEEEES----CHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCcH---------HHHHHHHHHHHHHHHHHHHHcCC-C--EEEEEC----CchHHHHHHHHHHHCCCEEEEEEeCC
Confidence 3211 11111222333333333333333 2 555543 33445555666678888776665554
No 384
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=33.94 E-value=76 Score=27.65 Aligned_cols=74 Identities=18% Similarity=0.167 Sum_probs=44.6
Q ss_pred HHHHHHHHCCCCEEEEecCh------hHhhcCCh-----hHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHH
Q psy965 129 HEIELLAKQKVDEVDIVIQR------SLVLNNQW-----PELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMT 197 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~------~~l~sg~~-----~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~i 197 (214)
.+++.+.+.|+|-|-+. +. +....... ....+-+.++++.. .+.||..-| +.+.+++.++
T Consensus 156 ~~a~~a~~~GaD~i~v~-g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~----~iPViaaGG-I~~~~~~~~~--- 226 (369)
T 3bw2_A 156 EEARAVEAAGADAVIAQ-GVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV----DIPVVAAGG-IMRGGQIAAV--- 226 (369)
T ss_dssp HHHHHHHHTTCSEEEEE-CTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC----SSCEEEESS-CCSHHHHHHH---
T ss_pred HHHHHHHHcCCCEEEEe-CCCcCCcCCCcccccccccccccHHHHHHHHHHhc----CceEEEECC-CCCHHHHHHH---
Confidence 47889999999988763 22 11110000 01234455566543 245677666 5577877654
Q ss_pred HHHcCCCEEEcCCCC
Q psy965 198 AMFAGSDFIKTSGSI 212 (214)
Q Consensus 198 a~~aGaDFIKTSTGf 212 (214)
+..|||+|-.+|+|
T Consensus 227 -l~~GAd~V~vGs~~ 240 (369)
T 3bw2_A 227 -LAAGADAAQLGTAF 240 (369)
T ss_dssp -HHTTCSEEEESHHH
T ss_pred -HHcCCCEEEEChHH
Confidence 34799999988875
No 385
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=33.93 E-value=2.4e+02 Score=24.73 Aligned_cols=81 Identities=10% Similarity=0.081 Sum_probs=57.7
Q ss_pred CCHHHHHHHHHHHHHC---CCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQ---KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~---GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
.+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++++++.|+ -+.+.+....=-+.++-.+.++..
T Consensus 170 ~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~-----~~~~~d~~~v~avR~a~G~--~~~l~vDaN~~~~~~~A~~~~~~l 242 (390)
T 3ugv_A 170 SPAEVAAEAVELKAEGQGTGFKGLKLRMGR-----DDPAVDIETAEAVWDAVGR--DTALMVDFNQGLDMAEAMHRTRQI 242 (390)
T ss_dssp CHHHHHHHHHHHHHTTCTTCCSEEEEECCC-----SSHHHHHHHHHHHHHHHCT--TSEEEEECTTCCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhhCCCcEEEEecCC-----CCHHHHHHHHHHHHHHhCC--CCEEEEECCCCCCHHHHHHHHHHH
Confidence 5667778899999999 99988764421 1345556667888888875 356667755444777777777777
Q ss_pred HHcCCCEEEcC
Q psy965 199 MFAGSDFIKTS 209 (214)
Q Consensus 199 ~~aGaDFIKTS 209 (214)
.+.|.+||--+
T Consensus 243 ~~~~i~~iEqP 253 (390)
T 3ugv_A 243 DDLGLEWIEEP 253 (390)
T ss_dssp TTSCCSEEECC
T ss_pred HhhCCCEEECC
Confidence 78899998654
No 386
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=33.75 E-value=2.1e+02 Score=25.02 Aligned_cols=80 Identities=8% Similarity=0.035 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
.+.+.-+.+++.+++.|.+-+-+=+.. ++.+.-.+=+++++++. + -+.+.++...--+.++..+.++...+.
T Consensus 147 ~~~~~~~~~a~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~a~-~--~~~l~vDan~~~~~~~A~~~~~~L~~~ 218 (385)
T 3i6e_A 147 PDFDADIALMERLRADGVGLIKLKTGF-----RDHAFDIMRLELIARDF-P--EFRVRVDYNQGLEIDEAVPRVLDVAQF 218 (385)
T ss_dssp SSHHHHHHHHHHHHHHTCCEEEEECSS-----SCHHHHHHHHHHHHHHC-T--TSEEEEECTTCCCGGGHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCC-----CCHHHHHHHHHHHHHhC-C--CCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 356666788999999999988765432 23455566678888888 4 246666654433667766777777788
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|.+||--+
T Consensus 219 ~i~~iEqP 226 (385)
T 3i6e_A 219 QPDFIEQP 226 (385)
T ss_dssp CCSCEECC
T ss_pred CCCEEECC
Confidence 99998644
No 387
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=33.68 E-value=39 Score=28.57 Aligned_cols=23 Identities=9% Similarity=0.011 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCC
Q psy965 190 NIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 190 ~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+.++.++|...|+++|..-+|+
T Consensus 108 ~~~~~i~~A~~LGa~~vv~~~g~ 130 (333)
T 3ktc_A 108 LMHESAGIVRELGANYVKVWPGQ 130 (333)
T ss_dssp HHHHHHHHHHHHTCSEEEECCTT
T ss_pred HHHHHHHHHHHhCCCEEEECCCC
Confidence 45668889999999999887763
No 388
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=33.56 E-value=2.3e+02 Score=24.30 Aligned_cols=97 Identities=12% Similarity=-0.011 Sum_probs=61.9
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHh-hcCChhHHHHHHHHHHHHhcCCceEEEEEe-c-
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV-LNNQWPELFSEVKQMKEKCGEKIHMKTILA-V- 182 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l-~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE-t- 182 (214)
..++|.+- .|...+..-+..++.|.+.|||-+=++.+ .++ +-..-+.+++-.++|.++++-+..+-=|=. |
T Consensus 79 grvpviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P-~y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~ 152 (318)
T 3qfe_A 79 PDFPIMAG-----VGAHSTRQVLEHINDASVAGANYVLVLPP-AYFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCN 152 (318)
T ss_dssp TTSCEEEE-----CCCSSHHHHHHHHHHHHHHTCSEEEECCC-CC---CCCHHHHHHHHHHHHHHCSSCEEEEECCC---
T ss_pred CCCcEEEe-----CCCCCHHHHHHHHHHHHHcCCCEEEEeCC-cccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccC
Confidence 45665544 27788898999999999999999966655 344 323678899999999988753222222111 2
Q ss_pred cCCCCHHHHHHHHHHHH-HcCCCEEEcCCC
Q psy965 183 GELKTSENIYCASMTAM-FAGSDFIKTSGS 211 (214)
Q Consensus 183 ~~L~t~e~i~~A~~ia~-~aGaDFIKTSTG 211 (214)
|.--+.+.+.+. +. .-..-.||=|+|
T Consensus 153 g~~l~~~~~~~L---a~~~pnIvgiKdssg 179 (318)
T 3qfe_A 153 GIDLDSDMITTI---ARKNPNVVGVKLTCA 179 (318)
T ss_dssp -CCCCHHHHHHH---HHHCTTEEEEEESSC
T ss_pred CCCCCHHHHHHH---HhhCCCEEEEEeCCC
Confidence 432255666544 43 356778888876
No 389
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=33.47 E-value=70 Score=28.84 Aligned_cols=62 Identities=10% Similarity=0.077 Sum_probs=46.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc
Q psy965 117 FPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG 183 (214)
Q Consensus 117 FP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~ 183 (214)
||.-...-+.| +-++.|.+.|.+.|=.-+... .++.+.+.++++.+.+.|+. .-++||+.++
T Consensus 10 Y~~~~~~~~~~-~yi~~a~~~Gf~~IFTSL~~~---e~~~~~~~~~~~~l~~~a~~-~g~~vi~DIs 71 (372)
T 2p0o_A 10 FLGEEITNDTI-IYIKKMKALGFDGIFTSLHIP---EDDTSLYRQRLTDLGAIAKA-EKMKIMVDIS 71 (372)
T ss_dssp CTTSCCCHHHH-HHHHHHHHTTCCEEEEEECCC--------CHHHHHHHHHHHHHH-HTCEEEEEEC
T ss_pred cCCCCCHHHHH-HHHHHHHHCCCCEEEccCCcc---CCChHHHHHHHHHHHHHHHH-CCCEEEEECC
Confidence 66555555555 789999999999998888753 57788889999999999986 6799999986
No 390
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=33.41 E-value=1.2e+02 Score=26.33 Aligned_cols=108 Identities=17% Similarity=0.073 Sum_probs=42.9
Q ss_pred CcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHH-HHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHH
Q psy965 90 FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLE-TRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKE 168 (214)
Q Consensus 90 ~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~-~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~ 168 (214)
+|.-++..++.+ +.+..+.|-.|+ |.|...-+ .|+.-.++|++.|||- +|+=++-+.+.|.....++|+.
T Consensus 178 s~~E~~~IR~~~---~~~fl~VTPGIr-~qG~~~~DQ~Rv~t~~~a~~aGAd~--iVvGr~I~~a~dp~~a~~~i~~--- 248 (303)
T 3ru6_A 178 SVFESKKIKEHT---SSNFLTLTPGIR-PFGETNDDQKRVANLAMARENLSDY--IVVGRPIYKNENPRAVCEKILN--- 248 (303)
T ss_dssp CTTTHHHHHHHS---CTTSEEEECCCC-TTC--------CCSHHHHHHTTCSE--EEECHHHHTSSCHHHHHHHHHH---
T ss_pred CHHHHHHHHHhC---CCccEEECCCcC-cccCCcccccccCCHHHHHHcCCCE--EEEChHHhCCCCHHHHHHHHHH---
Confidence 677777777655 344433333245 44543222 2345677889999995 7888888888887665555544
Q ss_pred HhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 169 KCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 169 a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
..+. |=|.+.....+++-|..--.-.+.-=-.||||..
T Consensus 249 ~i~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (303)
T 3ru6_A 249 KIHR----KNISENDIEQNYEVIQQKEWDMCNHFEEWIKTRP 286 (303)
T ss_dssp HHC---------------------------------------
T ss_pred HHHh----ccccccchhhhHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4333 3344444343333332222222222335677654
No 391
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=33.38 E-value=2.1e+02 Score=23.89 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=43.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHH-HHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELF-SEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~-~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
.+.+.-+.+++++.+.|+++|-+. +|..-.+. +.+..+.+.+.. ..+.+-+..+.+ +.+.+. ...+
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~-------gGe~p~~~~~~~~~li~~i~~-~~~~i~~s~g~l-~~e~l~----~L~~ 150 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQ-------SGEDPYXMPDVISDIVKEIKK-MGVAVTLSLGEW-PREYYE----KWKE 150 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEE-------ESCCGGGTTHHHHHHHHHHHT-TSCEEEEECCCC-CHHHHH----HHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEE-------eCCCCCccHHHHHHHHHHHHh-cCceEEEecCCC-CHHHHH----HHHH
Confidence 467888888999999999998664 23311111 333333333332 134455677877 655543 3456
Q ss_pred cCCCEEEc
Q psy965 201 AGSDFIKT 208 (214)
Q Consensus 201 aGaDFIKT 208 (214)
+|.|.+-.
T Consensus 151 ag~~~v~i 158 (348)
T 3iix_A 151 AGADRYLL 158 (348)
T ss_dssp HTCCEEEC
T ss_pred hCCCEEee
Confidence 78888753
No 392
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=33.24 E-value=85 Score=25.78 Aligned_cols=67 Identities=13% Similarity=0.083 Sum_probs=41.3
Q ss_pred cccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChh----HHHHHHHHH
Q psy965 91 VSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWP----ELFSEVKQM 166 (214)
Q Consensus 91 P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~----~v~~Ei~~v 166 (214)
|..++..++.+. . ..+.+--|+ |.|.+ .++|++.|+|- +|+=++-..+.|.. .+.+||.+.
T Consensus 146 p~e~~~ir~~~~---~-~~~vtPGI~-~~g~t--------p~~a~~~Gad~--iVVGR~I~~A~dP~~aa~~i~~~i~~~ 210 (222)
T 4dbe_A 146 LDHITQYRRDFE---K-MTIVSPGMG-SQGGS--------YGDAVCAGADY--EIIGRSIYNAGNPLTALRTINKIIEDK 210 (222)
T ss_dssp HHHHHHHHHHCT---T-CEEEECCBS-TTSBC--------TTHHHHHTCSE--EEECHHHHTSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC---C-CEEEcCCcc-cCccC--------HHHHHHcCCCE--EEECHHhcCCCCHHHHHHHHHHHHHHH
Confidence 556666666543 3 332232245 45542 56788899997 78899889988865 555566665
Q ss_pred HHHhcC
Q psy965 167 KEKCGE 172 (214)
Q Consensus 167 ~~a~~~ 172 (214)
...|++
T Consensus 211 ~~~~~~ 216 (222)
T 4dbe_A 211 VMKCKG 216 (222)
T ss_dssp HHHC--
T ss_pred HHHhhc
Confidence 555654
No 393
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=33.04 E-value=38 Score=27.21 Aligned_cols=74 Identities=9% Similarity=0.066 Sum_probs=43.3
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.+++.+.+.|+|.+=+..-+..-..|.- ...+++..+++.++. .+.+++.-| . +.+++. .+.++|||++--
T Consensus 123 ~~~~~~~~~g~d~v~~~~~~~~~~~g~~-~~~~~l~~i~~~~~~--~~pi~v~GG-I-~~~~~~----~~~~aGAd~vvv 193 (218)
T 3jr2_A 123 QDAKAWVDLGITQAIYHRSRDAELAGIG-WTTDDLDKMRQLSAL--GIELSITGG-I-VPEDIY----LFEGIKTKTFIA 193 (218)
T ss_dssp HHHHHHHHTTCCEEEEECCHHHHHHTCC-SCHHHHHHHHHHHHT--TCEEEEESS-C-CGGGGG----GGTTSCEEEEEE
T ss_pred HHHHHHHHcCccceeeeeccccccCCCc-CCHHHHHHHHHHhCC--CCCEEEECC-C-CHHHHH----HHHHcCCCEEEE
Confidence 3666677779876543332222223331 245677777776642 355666656 5 556664 377899999876
Q ss_pred CCC
Q psy965 209 SGS 211 (214)
Q Consensus 209 STG 211 (214)
++.
T Consensus 194 Gsa 196 (218)
T 3jr2_A 194 GRA 196 (218)
T ss_dssp SGG
T ss_pred chh
Confidence 553
No 394
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=33.00 E-value=2.6e+02 Score=24.73 Aligned_cols=85 Identities=11% Similarity=0.069 Sum_probs=59.9
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHH
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 194 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A 194 (214)
.++|. .+.+....+++...+.|.+-+=+=+.. ..+...+.+++++++.++ -+++.+....--+.++-.+.
T Consensus 182 s~~~~--~~~~~~~~~a~~~~~~G~~~~K~k~g~------~~~~~~~~v~~vR~~~g~--~~~l~vDaN~~~~~~~A~~~ 251 (412)
T 4h1z_A 182 SGLPE--DTRAKRAELAAAWQAKGFSSFKFASPV------ADDGVAKEMEILRERLGP--AVRIACDMHWAHTASEAVAL 251 (412)
T ss_dssp CCCCC--SSHHHHHHHHHHHHHTTCCEEEEEGGG------CTTCHHHHHHHHHHHHCS--SSEEEEECCSCCCHHHHHHH
T ss_pred ccCCC--CcHHHHHHHHHHHHhcCcceecccccc------chhhHHHHHHHHHhccCC--eEEEEeccccCCCHHHHHHH
Confidence 34443 356666777889999999887653322 335566778999998876 46788886554477777777
Q ss_pred HHHHHHcCCCEEEcC
Q psy965 195 SMTAMFAGSDFIKTS 209 (214)
Q Consensus 195 ~~ia~~aGaDFIKTS 209 (214)
++...+.|..||--+
T Consensus 252 ~~~l~~~~l~~iEqP 266 (412)
T 4h1z_A 252 IKAMEPHGLWFAEAP 266 (412)
T ss_dssp HHHHGGGCEEEEECC
T ss_pred HHhhcccccceecCC
Confidence 777778898887643
No 395
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=32.89 E-value=49 Score=28.04 Aligned_cols=85 Identities=16% Similarity=0.053 Sum_probs=56.1
Q ss_pred cCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHH-HHHHHHHHHHhcCCceEEEEEeccCCCCHHHHH
Q psy965 115 AGF-PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPEL-FSEVKQMKEKCGEKIHMKTILAVGELKTSENIY 192 (214)
Q Consensus 115 igF-P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v-~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~ 192 (214)
+=| +.|.-..+.=..-+++.++. ++- ++++ | -+|....+ .+|-.++.+.+-+ .+.||.-+|..+| ++..
T Consensus 8 TPf~~dg~iD~~~l~~lv~~li~~-v~g--l~v~-G--ttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg~~~t-~~ai 78 (283)
T 2pcq_A 8 TPFDREGRLDEEAFRELAQALEPL-VDG--LLVY-G--SNGEGVHLTPEERARGLRALRP--RKPFLVGLMEETL-PQAE 78 (283)
T ss_dssp CCBCTTCCBCHHHHHHHHHHHGGG-SSC--CEET-C--TTTTGGGSCHHHHHHHHHTCCC--SSCCEEEECCSSH-HHHH
T ss_pred CCCCCCCCcCHHHHHHHHHHHHhh-CCE--EEEC-C--cCcCchhcCHHHHHHHHHHHHh--CCcEEEeCCCCCH-HHHH
Confidence 445 45666666666677777776 555 2222 2 23444333 3567777776654 5789999999855 5566
Q ss_pred HHHHHHHHcCCCEEEc
Q psy965 193 CASMTAMFAGSDFIKT 208 (214)
Q Consensus 193 ~A~~ia~~aGaDFIKT 208 (214)
+.++.|.++|+|.+=-
T Consensus 79 ~la~~A~~~Gadavlv 94 (283)
T 2pcq_A 79 GALLEAKAAGAMALLA 94 (283)
T ss_dssp HHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhcCCCEEEe
Confidence 7888999999998743
No 396
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=32.70 E-value=82 Score=25.93 Aligned_cols=96 Identities=8% Similarity=0.002 Sum_probs=49.5
Q ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhH-hhcCChhHHHHHHHHHHHHhcCCceE-EEEEeccCC-
Q psy965 109 PCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSL-VLNNQWPELFSEVKQMKEKCGEKIHM-KTILAVGEL- 185 (214)
Q Consensus 109 ~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~-l~sg~~~~v~~Ei~~v~~a~~~~~~l-KvIlEt~~L- 185 (214)
+++.- +.+ .|..+++.. ++.+.+.|.+-|++..+... .....+. .+++.++++++.. .-+ .+.+-.++.
T Consensus 7 klG~~-~~~-~~~~~~~~~---l~~~~~~G~~~vEl~~~~~~~~~~~~~~--~~~~~~~~~~l~~-~gl~~~~~h~~~~~ 78 (303)
T 3aal_A 7 KIGSH-VSM-SGKKMLLAA---SEEAASYGANTFMIYTGAPQNTKRKSIE--ELNIEAGRQHMQA-HGIEEIVVHAPYII 78 (303)
T ss_dssp CEEEE-CCC-CTTTTHHHH---HHHHHHTTCSEEEEESSCTTCCCCCCSG--GGCHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred eecee-eec-CCCccHHHH---HHHHHHcCCCEEEEcCCCCCccCCCCCC--HHHHHHHHHHHHH-cCCceEEEeccccc
Confidence 34544 333 233355544 45667789999999543321 1111111 1234444444432 123 233333432
Q ss_pred --CC----------HHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 186 --KT----------SENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 186 --~t----------~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+ .+.+.++.++|...|+.+|-+-+|+
T Consensus 79 nl~s~d~~~~r~~~~~~~~~~i~~A~~lGa~~vv~h~g~ 117 (303)
T 3aal_A 79 NIGNTTNLDTFSLGVDFLRAEIERTEAIGAKQLVLHPGA 117 (303)
T ss_dssp CTTCSSCHHHHHHHHHHHHHHHHHHHHHTCSEEEECCEE
T ss_pred cCCCCCcHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCc
Confidence 11 2335567788999999999887664
No 397
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=32.69 E-value=75 Score=28.26 Aligned_cols=18 Identities=6% Similarity=0.230 Sum_probs=12.1
Q ss_pred HHHHHHHHHCCCCEEEEec
Q psy965 128 LHEIELLAKQKVDEVDIVI 146 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vi 146 (214)
...++.+.+.||.-| |++
T Consensus 27 ~e~A~~ae~aGA~aI-~~l 44 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAV-MAL 44 (330)
T ss_dssp HHHHHHHHHHTCSEE-EEC
T ss_pred HHHHHHHHHcCCCEE-Eec
Confidence 446677777788887 554
No 398
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=31.70 E-value=2.3e+02 Score=23.82 Aligned_cols=93 Identities=9% Similarity=0.026 Sum_probs=63.9
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe----
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA---- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE---- 181 (214)
..++|.+- .|...+..-+..++.|.+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- ++= +-.
T Consensus 70 grvpviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y~~-~~~~~l~~~f~~ia~a~~l--Pii-lYn~P~~ 139 (292)
T 3daq_A 70 KRVPVIAG-----TGTNDTEKSIQASIQAKALGADAIMLITPY-YNK-TNQRGLVKHFEAIADAVKL--PVV-LYNVPSR 139 (292)
T ss_dssp TSSCEEEE-----CCCSCHHHHHHHHHHHHHHTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHHCS--CEE-EEECHHH
T ss_pred CCCcEEEe-----CCcccHHHHHHHHHHHHHcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhCCC--CEE-EEecccc
Confidence 35665444 367788888999999999999999776554 344 4568899999999988852 221 222
Q ss_pred ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ .-..-.||=|+|
T Consensus 140 tg~~l~~~~~~~La~---~pnivgiK~ssg 166 (292)
T 3daq_A 140 TNMTIEPETVEILSQ---HPYIVALKDATN 166 (292)
T ss_dssp HSCCCCHHHHHHHHT---STTEEEEEECCC
T ss_pred cCCCCCHHHHHHHhc---CCCEEEEEeCCC
Confidence 443336677765543 456778888876
No 399
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=31.61 E-value=1.3e+02 Score=26.84 Aligned_cols=133 Identities=12% Similarity=0.079 Sum_probs=76.8
Q ss_pred CCCCCCCHHHHHHHHH-HhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCC-CCCCHHHHHHHHHHH
Q psy965 57 TLSGDDTEAVVETLTL-KAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPS-GQYLLETRLHEIELL 134 (214)
Q Consensus 57 lL~~~~T~~~I~~lc~-eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~-G~~~~~~K~~E~~~A 134 (214)
.|+..-...-++++++ |.. +. ....+||.||.. |.+.+ --+ -+.|- =+.+.+.=+.|++++
T Consensus 6 ~l~~g~~~~~~R~lv~~Et~--L~-----~~dLI~PlFV~e--------g~~~~-~~I-~SMPGv~r~sid~l~~~~~~~ 68 (330)
T 1pv8_A 6 VLHSGYLHPLLRAWQTATTT--LN-----ASNLIYPIFVTD--------VPDDI-QPI-TSLPGVARYGVKRLEEMLRPL 68 (330)
T ss_dssp -----CCCHHHHHHHTTTTC--CC-----GGGEEEEEEECS--------CTTCE-EEC-SSSTTCEEECHHHHHHHHHHH
T ss_pred ccccccCCHHHHHHHhcCCc--cC-----HHHceeeEEEec--------CCCCc-ccc-CCCCCceeecHHHHHHHHHHH
Confidence 4555555667888877 543 11 235789999963 33322 122 34452 235678888999999
Q ss_pred HHCCCCEEEEecChhHh-hc-------CChhHHHHHHHHHHHHhcCCceEEEEEe-----------------ccCCCCHH
Q psy965 135 AKQKVDEVDIVIQRSLV-LN-------NQWPELFSEVKQMKEKCGEKIHMKTILA-----------------VGELKTSE 189 (214)
Q Consensus 135 i~~GAdEID~Vin~~~l-~s-------g~~~~v~~Ei~~v~~a~~~~~~lKvIlE-----------------t~~L~t~e 189 (214)
++.|..-|-+-.-.... |+ ..-..+.+=|+++++..++ +-||-. .|+..+++
T Consensus 69 ~~~Gi~~v~LFgvp~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pd---l~vitDvcLc~YT~HGHcGil~~~g~v~ND~ 145 (330)
T 1pv8_A 69 VEEGLRCVLIFGVPSRVPKDERGSAADSEESPAIEAIHLLRKTFPN---LLVACDVCLCPYTSHGHCGLLSENGAFRAEE 145 (330)
T ss_dssp HHHTCCEEEEEECC--------------CCSHHHHHHHHHHHHSTT---SEEEEEECCC---------------CHHHHH
T ss_pred HHCCCCEEEEecCCcccCCCccccccCCCCChHHHHHHHHHHHCCC---eEEEEeeecccccCCCceeEECCCCcCccHH
Confidence 99999988774332222 32 2334677789999988764 334433 45444555
Q ss_pred HHHHHHHHH---HHcCCCEEEcC
Q psy965 190 NIYCASMTA---MFAGSDFIKTS 209 (214)
Q Consensus 190 ~i~~A~~ia---~~aGaDFIKTS 209 (214)
-+...++.| .+||||.|--|
T Consensus 146 Tl~~La~~Als~A~AGAdiVAPS 168 (330)
T 1pv8_A 146 SRQRLAEVALAYAKAGCQVVAPS 168 (330)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCeeecc
Confidence 555555544 57999999765
No 400
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=31.49 E-value=57 Score=27.96 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=27.3
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 175 HMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 175 ~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.+-+|-|-|-..+.+...+.++.+.++|+|++|.-
T Consensus 38 ~~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~ 72 (276)
T 1vs1_A 38 SKAVIAGPCSVESWEQVREAALAVKEAGAHMLRGG 72 (276)
T ss_dssp BCEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECB
T ss_pred CeEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEeE
Confidence 47788888877777777778888888888888743
No 401
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=31.44 E-value=52 Score=26.53 Aligned_cols=107 Identities=7% Similarity=-0.131 Sum_probs=55.5
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCCCC----CCCHH-------HHHHHHHHHHHCCCCEEEEecC--hhH--hh----
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFPSG----QYLLE-------TRLHEIELLAKQKVDEVDIVIQ--RSL--VL---- 152 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP~G----~~~~~-------~K~~E~~~Ai~~GAdEID~Vin--~~~--l~---- 152 (214)
..+...++.++ ..++.+.+. .+||.+ ....+ .=..-++.|.+.|+.-+=+.+. .|. +.
T Consensus 47 ~~~~~~~~~l~--~~gl~~~~~-~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~ 123 (290)
T 2qul_A 47 AKKRELKAVAD--DLGLTVMCC-IGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKD 123 (290)
T ss_dssp HHHHHHHHHHH--HHTCEEEEE-EEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCC
T ss_pred hhHHHHHHHHH--HcCCceEEe-cCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCccc
Confidence 34566667776 467887776 566522 21111 1123455666789987632221 122 11
Q ss_pred -cCChhHHHHHHHHHHHHhcCCceEEEEEecc------CCCCHHHHHHHHHHHHHcCCCE
Q psy965 153 -NNQWPELFSEVKQMKEKCGEKIHMKTILAVG------ELKTSENIYCASMTAMFAGSDF 205 (214)
Q Consensus 153 -sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~------~L~t~e~i~~A~~ia~~aGaDF 205 (214)
...|+.+.+-++.+.+.+.. .-+++-+|+- .+.+.++..+ ++-..|.+.
T Consensus 124 ~~~~~~~~~~~l~~l~~~a~~-~gv~l~lEn~~~~~~~~~~~~~~~~~---l~~~~~~~~ 179 (290)
T 2qul_A 124 KRPYVDRAIESVRRVIKVAED-YGIIYALEVVNRFEQWLCNDAKEAIA---FADAVDSPA 179 (290)
T ss_dssp CHHHHHHHHHHHHTTHHHHHH-HTCEEEEECCCTTTCSSCCSHHHHHH---HHHHHCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCEEEEEeCccccccccCCHHHHHH---HHHHcCCCC
Confidence 11244555555666555543 3589999964 3445555443 344444443
No 402
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=31.36 E-value=1.2e+02 Score=27.56 Aligned_cols=79 Identities=15% Similarity=0.087 Sum_probs=50.9
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
+.+-=+.-++.+.+.||++|=+.=-.|.. ....+++=++.+++..+ +.|+.-.=+|...-...+..|+++|
T Consensus 178 d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~---~P~~v~~lv~~l~~~~~------~~i~~H~Hnd~GlAvAN~laAv~aG 248 (423)
T 3ivs_A 178 DLVDLLSLYKAVDKIGVNRVGIADTVGCA---TPRQVYDLIRTLRGVVS------CDIECHFHNDTGMAIANAYCALEAG 248 (423)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEEETTSCC---CHHHHHHHHHHHHHHCS------SEEEEEEBCTTSCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCccccCCccCcC---CHHHHHHHHHHHHhhcC------CeEEEEECCCCchHHHHHHHHHHhC
Confidence 34444555677888999987555444433 45667777777776432 3455554444444555678899999
Q ss_pred CCEEEcCC
Q psy965 203 SDFIKTSG 210 (214)
Q Consensus 203 aDFIKTST 210 (214)
++.|-+|-
T Consensus 249 a~~vd~ti 256 (423)
T 3ivs_A 249 ATHIDTSI 256 (423)
T ss_dssp CCEEEEBG
T ss_pred CCEEEEec
Confidence 99998874
No 403
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=31.35 E-value=2.1e+02 Score=25.46 Aligned_cols=110 Identities=17% Similarity=0.184 Sum_probs=70.1
Q ss_pred ccccCcccHHHHHHhhhcCCCCCCeEEEecCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhc-------CChh
Q psy965 86 VLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLN-------NQWP 157 (214)
Q Consensus 86 ~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~-G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~s-------g~~~ 157 (214)
...+||.||.... +...+|. +.|- =+.+.+.=+.|++++++.|..-|-+-.-... |+ ..-.
T Consensus 34 ~dLI~PlFV~eg~------~~~~~I~----SMPGv~r~sid~l~~~~~~~~~lGi~~v~LFgvp~~-Kd~~gs~A~~~~g 102 (328)
T 1w1z_A 34 NDLVFPLFVMPGT------NAVEEVS----SMPGSFRFTIDRAVEECKELYDLGIQGIDLFGIPEQ-KTEDGSEAYNDNG 102 (328)
T ss_dssp GGEEEEEEEESSS------SCEEEET----TEEEEEEEEHHHHHHHHHHHHHHTCCEEEEEECCSS-CCSSCGGGGCTTS
T ss_pred HHceeeEEEecCC------CCccccC----CCCCeeEeCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCccccccCCCCC
Confidence 3478999996321 1122333 3341 2345778889999999999998876533222 33 2335
Q ss_pred HHHHHHHHHHHHhcCCceEEE----------------EEeccCCCCHHHHHHHHHHH---HHcCCCEEEcC
Q psy965 158 ELFSEVKQMKEKCGEKIHMKT----------------ILAVGELKTSENIYCASMTA---MFAGSDFIKTS 209 (214)
Q Consensus 158 ~v~~Ei~~v~~a~~~~~~lKv----------------IlEt~~L~t~e~i~~A~~ia---~~aGaDFIKTS 209 (214)
.+.+=|+++++..++ +-| ||+.|+..+++-+...++.| .+||||.|--|
T Consensus 103 ~v~rair~iK~~~p~---l~vitDvcLc~YT~HGHcGil~~g~V~ND~Tl~~L~k~Als~A~AGADiVAPS 170 (328)
T 1w1z_A 103 ILQQAIRAIKKAVPE---LCIMTDVALDPFTPFGHDGLVKDGIILNDETVEVLQKMAVSHAEAGADFVSPS 170 (328)
T ss_dssp HHHHHHHHHHHHSTT---SEEEEEECSTTTSTTSCSSEESSSCEEHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred hHHHHHHHHHHHCCC---eEEEEeeecccCCCCCceeeccCCcCccHHHHHHHHHHHHHHHHcCCCeEecc
Confidence 677889999988764 223 33456555666666666655 57999999755
No 404
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=31.25 E-value=85 Score=25.16 Aligned_cols=79 Identities=8% Similarity=-0.047 Sum_probs=42.7
Q ss_pred HHHHHHCCCCEEEEecChh-HhhcCChhHHHHHHHHHHHHhcCCceEE---EEEeccC---CCC---------HHHHHHH
Q psy965 131 IELLAKQKVDEVDIVIQRS-LVLNNQWPELFSEVKQMKEKCGEKIHMK---TILAVGE---LKT---------SENIYCA 194 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~-~l~sg~~~~v~~Ei~~v~~a~~~~~~lK---vIlEt~~---L~t---------~e~i~~A 194 (214)
++.+.+.|.+-|++...-. ....... -.+++.++++.+.. .-++ +..-.++ +.+ .+.+.++
T Consensus 18 l~~~~~~G~~~iEl~~~~~~~~~~~~~--~~~~~~~~~~~l~~-~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~~ 94 (287)
T 2x7v_A 18 PQDTVNIGGNSFQIFPHNARSWSAKLP--SDEAATKFKREMKK-HGIDWENAFCHSGYLINLASPKDDIWQKSVELLKKE 94 (287)
T ss_dssp HHHHHHTTCSEEEECSCCCSSSCCCCC--CHHHHHHHHHHHHH-HTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCCcccccccCC--CHHHHHHHHHHHHH-cCCCcceeEEecccccccCCCCHHHHHHHHHHHHHH
Confidence 4566788999999854211 0111111 12344445544432 2234 2222222 211 1346678
Q ss_pred HHHHHHcCCCEEEcCCCC
Q psy965 195 SMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 195 ~~ia~~aGaDFIKTSTGf 212 (214)
.++|...|+.+|.+.+|+
T Consensus 95 i~~A~~lG~~~v~~~~g~ 112 (287)
T 2x7v_A 95 VEICRKLGIRYLNIHPGS 112 (287)
T ss_dssp HHHHHHHTCCEEEECCEE
T ss_pred HHHHHHcCCCEEEEecCC
Confidence 889999999999987774
No 405
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=31.08 E-value=1.4e+02 Score=25.22 Aligned_cols=69 Identities=10% Similarity=0.066 Sum_probs=34.9
Q ss_pred HHHHHHHHCCCCEEEEecC----hhHhhcCC-hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 129 HEIELLAKQKVDEVDIVIQ----RSLVLNNQ-WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin----~~~l~sg~-~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
..++.+.+.||+.|+++ | ......|. ...-.+.++.+++.+.-+...|.- ++. . .-.+++..+||
T Consensus 32 ~~a~~~~~~Ga~~I~~l-~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r--~g~---~----~~~~~~~a~GA 101 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMAL-ERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKAR--IGH---I----VEARVLEAMGV 101 (305)
T ss_dssp HHHHHHHHTTCSEEEEC-CC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEEC--TTC---H----HHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEEc-CCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEeccc--ccc---h----HHHHHHHHCCC
Confidence 46777888999999765 3 12223340 011134455566655421222221 221 1 22455667999
Q ss_pred CEEE
Q psy965 204 DFIK 207 (214)
Q Consensus 204 DFIK 207 (214)
|+|-
T Consensus 102 d~V~ 105 (305)
T 2nv1_A 102 DYID 105 (305)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 9995
No 406
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=31.01 E-value=95 Score=26.49 Aligned_cols=70 Identities=11% Similarity=0.050 Sum_probs=42.7
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.|.+.|++.|++-|=+ -|++ +..-..+ .+-...+++..+. -.-+|-|.|-- |.+++.++ .++|+|-+=-
T Consensus 180 eEl~~A~~~ga~iIGi-nnr~-l~t~~~d--l~~~~~L~~~ip~--~~~vIaesGI~-t~edv~~l----~~~Ga~gvLV 248 (272)
T 3tsm_A 180 AEMERALKLSSRLLGV-NNRN-LRSFEVN--LAVSERLAKMAPS--DRLLVGESGIF-THEDCLRL----EKSGIGTFLI 248 (272)
T ss_dssp HHHHHHTTSCCSEEEE-ECBC-TTTCCBC--THHHHHHHHHSCT--TSEEEEESSCC-SHHHHHHH----HTTTCCEEEE
T ss_pred HHHHHHHhcCCCEEEE-CCCC-CccCCCC--hHHHHHHHHhCCC--CCcEEEECCCC-CHHHHHHH----HHcCCCEEEE
Confidence 5788889999987622 2443 2222222 2333344444443 36789999955 88888654 6789987643
Q ss_pred C
Q psy965 209 S 209 (214)
Q Consensus 209 S 209 (214)
+
T Consensus 249 G 249 (272)
T 3tsm_A 249 G 249 (272)
T ss_dssp C
T ss_pred c
Confidence 3
No 407
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=30.96 E-value=1.8e+02 Score=26.21 Aligned_cols=82 Identities=10% Similarity=0.109 Sum_probs=47.1
Q ss_pred HHHHHHHCCCCEEEEecChhHhh----cC---------------ChhHHHHHHHHHHHHhcC-CceEEEEEecc--CCC-
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVL----NN---------------QWPELFSEVKQMKEKCGE-KIHMKTILAVG--ELK- 186 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~----sg---------------~~~~v~~Ei~~v~~a~~~-~~~lKvIlEt~--~L~- 186 (214)
-++.|.+.|.|-||+=.--|+|+ |. +...+.+=+.+|+++++. ...+|+=.... -..
T Consensus 173 aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~ 252 (407)
T 3tjl_A 173 AAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNMKA 252 (407)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCG
T ss_pred HHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcc
Confidence 35667888999999976665544 11 223455666788888875 22333322110 010
Q ss_pred --C----HHHHHHHHHHH---HHcC--CCEEEcCCC
Q psy965 187 --T----SENIYCASMTA---MFAG--SDFIKTSGS 211 (214)
Q Consensus 187 --t----~e~i~~A~~ia---~~aG--aDFIKTSTG 211 (214)
+ .++-...++.. .++| +|||--+.|
T Consensus 253 ~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~ 288 (407)
T 3tjl_A 253 HKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEP 288 (407)
T ss_dssp GGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECT
T ss_pred cccccccHHHHHHHHHHHHhHhhcCCceeEEEEEcc
Confidence 1 22334445555 6678 999987654
No 408
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.78 E-value=2.5e+02 Score=23.96 Aligned_cols=92 Identities=13% Similarity=0.036 Sum_probs=63.2
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe----
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA---- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE---- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- -+||=
T Consensus 91 grvpViaG-----vg~~st~eai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~l----PiilYn~P~ 159 (314)
T 3qze_A 91 GRIPVIAG-----TGANSTREAVALTEAAKSGGADACLLVTPY-YNK-PTQEGMYQHFRHIAEAVAI----PQILYNVPG 159 (314)
T ss_dssp TSSCEEEE-----CCCSSHHHHHHHHHHHHHTTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHSCS----CEEEEECHH
T ss_pred CCCcEEEe-----CCCcCHHHHHHHHHHHHHcCCCEEEEcCCC-CCC-CCHHHHHHHHHHHHHhcCC----CEEEEeCcc
Confidence 45665554 267788888999999999999999777654 334 3558889999999988742 23332
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.+ ..-..-.||=|+|
T Consensus 160 ~tg~~l~~~~~~~La---~~pnIvgiKdssg 187 (314)
T 3qze_A 160 RTSCDMLPETVERLS---KVPNIIGIKEATG 187 (314)
T ss_dssp HHSCCCCHHHHHHHH---TSTTEEEEEECSC
T ss_pred ccCCCCCHHHHHHHh---cCCCEEEEEcCCC
Confidence 34333667665544 3457778888877
No 409
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=30.74 E-value=68 Score=25.56 Aligned_cols=17 Identities=18% Similarity=0.216 Sum_probs=9.2
Q ss_pred HHHHHHHHCCCCEEEEe
Q psy965 129 HEIELLAKQKVDEVDIV 145 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~V 145 (214)
..++.+++.|++-|-+.
T Consensus 17 ~~~~~a~~~Gv~~v~lr 33 (210)
T 3ceu_A 17 KIITALFEEGLDILHLR 33 (210)
T ss_dssp HHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHCCCCEEEEc
Confidence 44555566665555444
No 410
>1lxj_A YBL001C, hypothetical 11.5KDA protein in HTB2-NTH2 interge region; hypothetical protein, HTB2-NTH2 intergenic region; 1.80A {Saccharomyces cerevisiae} SCOP: d.58.48.1
Probab=30.72 E-value=23 Score=26.05 Aligned_cols=54 Identities=11% Similarity=0.239 Sum_probs=42.2
Q ss_pred CCCCCCC--CHHHHHHHHHHHHHCCCCEEEEecCh-hHhhcCChhHHHHHHHHHHHHhc
Q psy965 116 GFPSGQY--LLETRLHEIELLAKQKVDEVDIVIQR-SLVLNNQWPELFSEVKQMKEKCG 171 (214)
Q Consensus 116 gFP~G~~--~~~~K~~E~~~Ai~~GAdEID~Vin~-~~l~sg~~~~v~~Ei~~v~~a~~ 171 (214)
=+|.|.. ....=++++.+.++. .-+++.+|- +-...|+|+++.+=++++-+++.
T Consensus 12 v~Plg~~~~svs~~Va~~i~~i~~--sGl~y~~~pm~T~IEGe~devm~vv~~~~e~~~ 68 (104)
T 1lxj_A 12 MVPIGTDSASISDFVALIEKKIRE--SPLKSTLHSAGTTIEGPWDDVMGLIGEIHEYGH 68 (104)
T ss_dssp EEEESCSCSCCHHHHHHHHHHHHT--SSSEEEEETTEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCCCHHHHHHHHHHHHHH--cCCCeEeCCCccEEEcCHHHHHHHHHHHHHHHH
Confidence 4788853 666677888888873 556777666 77889999999999999888875
No 411
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=30.59 E-value=1.7e+02 Score=26.77 Aligned_cols=81 Identities=12% Similarity=0.132 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEecChhHh-------------hcCC--hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCH
Q psy965 124 LETRLHEIELLAKQKVDEVDIVIQRSLV-------------LNNQ--WPELFSEVKQMKEKCGEKIHMKTILAVGELKTS 188 (214)
Q Consensus 124 ~~~K~~E~~~Ai~~GAdEID~Vin~~~l-------------~sg~--~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~ 188 (214)
.+....-++.+.+.|+|-|.+. |...- .||. +..-.+-++++++++++. +- |+-+|-..+.
T Consensus 310 ~ed~~~iA~~~~~aGaDgI~v~-ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~--iP-VIg~GGI~s~ 385 (443)
T 1tv5_A 310 QEQKKEIADVLLETNIDGMIIS-NTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQ--IP-IIASGGIFSG 385 (443)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEC-CCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTC--SC-EEEESSCCSH
T ss_pred HHHHHHHHHHHHHcCCCEEEEE-CCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCC--Cc-EEEECCCCCH
Confidence 3444555778888999998654 54321 1222 223346678888877532 33 5556667687
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 189 ENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+...++ +.+|||.|--.||+
T Consensus 386 ~DA~e~----l~aGAd~Vqigral 405 (443)
T 1tv5_A 386 LDALEK----IEAGASVCQLYSCL 405 (443)
T ss_dssp HHHHHH----HHTTEEEEEESHHH
T ss_pred HHHHHH----HHcCCCEEEEcHHH
Confidence 766543 35899999988875
No 412
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=30.17 E-value=88 Score=26.11 Aligned_cols=61 Identities=13% Similarity=0.132 Sum_probs=37.0
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
++.+|.+.|||-|=+ ....+. ++++++.+.++. .-+-+++|+. +.++.. .+.+.|+|||=.
T Consensus 120 qi~~a~~~GAD~VlL--~~~~l~--------~~l~~l~~~a~~-lGl~~lvev~---~~~E~~----~a~~~gad~IGv 180 (254)
T 1vc4_A 120 MLEEARAFGASAALL--IVALLG--------ELTGAYLEEARR-LGLEALVEVH---TERELE----IALEAGAEVLGI 180 (254)
T ss_dssp HHHHHHHTTCSEEEE--EHHHHG--------GGHHHHHHHHHH-HTCEEEEEEC---SHHHHH----HHHHHTCSEEEE
T ss_pred HHHHHHHcCCCEEEE--CccchH--------HHHHHHHHHHHH-CCCeEEEEEC---CHHHHH----HHHHcCCCEEEE
Confidence 678899999998543 333332 233334333322 2367778888 446654 456679999854
No 413
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=29.41 E-value=2.8e+02 Score=24.03 Aligned_cols=80 Identities=8% Similarity=0.000 Sum_probs=55.9
Q ss_pred CHHHHHHHHHHHHHC-CCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 123 LLETRLHEIELLAKQ-KVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~-GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
+.+.-+.+++.+++. |.+-+-+=+.. .+.+.-.+=+++++++.|+ .+.+++....=-+.++..+.++...+.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~-----~~~~~d~~~v~avR~~~g~--~~~l~vDan~~~~~~~a~~~~~~l~~~ 223 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGH-----DDPNIDIARLTAVRERVDS--AVRIAIDGNGKWDLPTCQRFCAAAKDL 223 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCC-----SSHHHHHHHHHHHHHHSCT--TCEEEEECTTCCCHHHHHHHHHHTTTS
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCC-----CCHHHHHHHHHHHHHHcCC--CCcEEeeCCCCCCHHHHHHHHHHHhhc
Confidence 567778899999999 99988764421 2455556678888888875 245566654433667766677766778
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|.+||--+
T Consensus 224 ~i~~iEqP 231 (372)
T 3tj4_A 224 DIYWFEEP 231 (372)
T ss_dssp CEEEEESC
T ss_pred CCCEEECC
Confidence 88888644
No 414
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=29.30 E-value=1.6e+02 Score=25.54 Aligned_cols=87 Identities=13% Similarity=-0.009 Sum_probs=55.1
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
.+++... +|. .+.+.-..+++.+++.|.+-+.+=+.. ++.+...+=++++++++++. +.+.+....--
T Consensus 134 ~v~~~~~-~~~----~~~e~~~~~a~~~~~~Gf~~iKik~g~-----~~~~~~~e~v~avr~a~g~~--~~l~vDan~~~ 201 (378)
T 2qdd_A 134 PVPINSS-IST----GTPDQMLGLIAEAAAQGYRTHSAKIGG-----SDPAQDIARIEAISAGLPDG--HRVTFDVNRAW 201 (378)
T ss_dssp CEEBEEE-ECS----CCHHHHHHHHHHHHHHTCCEEEEECCS-----SCHHHHHHHHHHHHHSCCTT--CEEEEECTTCC
T ss_pred CCceEEE-ecC----CCHHHHHHHHHHHHHHhhhheeecCCC-----CChHHHHHHHHHHHHHhCCC--CEEEEeCCCCC
Confidence 4565544 332 456777888999999999999963211 25566677788888888752 44566654322
Q ss_pred CHHHHHHHHHHHHHcCCCEEE
Q psy965 187 TSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.++..+.++... .|. ||-
T Consensus 202 ~~~~a~~~~~~l~-~~i-~iE 220 (378)
T 2qdd_A 202 TPAIAVEVLNSVR-ARD-WIE 220 (378)
T ss_dssp CHHHHHHHHTSCC-CCC-EEE
T ss_pred CHHHHHHHHHHhC-CCc-EEE
Confidence 6565555444444 677 775
No 415
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=29.23 E-value=46 Score=27.66 Aligned_cols=24 Identities=17% Similarity=0.005 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 189 ENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 189 e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
+.+.++.++|...|+.+|.+.+|.
T Consensus 111 ~~~~~~i~~A~~lGa~~v~~~~g~ 134 (340)
T 2zds_A 111 AEIKDTARAAARLGVDTVIGFTGS 134 (340)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCC
Confidence 346678889999999999998875
No 416
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=29.15 E-value=1.1e+02 Score=31.28 Aligned_cols=81 Identities=16% Similarity=0.064 Sum_probs=53.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
.++.+-=+.-++.+.+.||+.|=+.=-.|.+ ....+++=++++++.. .+.|+.-.=+|...-..-+..|++
T Consensus 705 ~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~---~P~~~~~lv~~l~~~~------~~~i~~H~Hnd~GlAvAn~laAv~ 775 (1165)
T 2qf7_A 705 KYDLKYYTNLAVELEKAGAHIIAVKDMAGLL---KPAAAKVLFKALREAT------GLPIHFHTHDTSGIAAATVLAAVE 775 (1165)
T ss_dssp GGCHHHHHHHHHHHHHTTCSEEEEEETTCCC---CHHHHHHHHHHHHHHC------SSCEEEEECBTTSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCccCCc---CHHHHHHHHHHHHHhc------CCeEEEEECCCCCHHHHHHHHHHH
Confidence 3566666777888999999987554333332 4677778788888754 233444333333334455678899
Q ss_pred cCCCEEEcCC
Q psy965 201 AGSDFIKTSG 210 (214)
Q Consensus 201 aGaDFIKTST 210 (214)
||+|.|-++-
T Consensus 776 aGa~~vd~ti 785 (1165)
T 2qf7_A 776 AGVDAVDAAM 785 (1165)
T ss_dssp TTCSEEEEBC
T ss_pred hCCCEEEecc
Confidence 9999999874
No 417
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=29.12 E-value=86 Score=27.91 Aligned_cols=124 Identities=14% Similarity=0.054 Sum_probs=73.2
Q ss_pred CCCCCCCHHHHHHHHHHhhc-cCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHH
Q psy965 57 TLSGDDTEAVVETLTLKAIQ-PLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLA 135 (214)
Q Consensus 57 lL~~~~T~~~I~~lc~eA~~-~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai 135 (214)
.++|++|+++|++++++-.. .++. . ... |..-.+..+ +|......+. +.+..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~g~~~---------~---------~~~--g~~~~~ig~-~g~~~~~~~~-----~~~~~- 68 (350)
T 1vr6_A 16 VLKPGSTEEDIRKVVKLAESYNLKC---------H---------ISK--GQERTVIGI-IGDDRYVVAD-----KFESL- 68 (350)
T ss_dssp EECTTCCHHHHHHHHHHHHHTTEEE---------E---------EEE--CSSCEEEEE-EEEESSCCHH-----HHHTS-
T ss_pred EECCCCCHHHHHHHHHHHHhCCCeE---------E---------EEe--cCceEEEEE-ECCcCcCCHH-----HhhCC-
Confidence 48999999999999998774 2221 0 111 444445555 4665443331 11111
Q ss_pred HCCCCEEEEecChhHhhcCChhHHHHHHHHHHH-HhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 136 KQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKE-KCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 136 ~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~-a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
.|++.+--|-.--.+.|..+..--..+ .+.. ..|+ ..+-+|-|-|-..+.+...+.++.+.++|+|++|.-+
T Consensus 69 -~~v~~~~~i~~~~k~~sr~~~~~~~~i-~i~~~~iG~-~~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~ 141 (350)
T 1vr6_A 69 -DCVESVVRVLKPYKLVSREFHPEDTVI-DLGDVKIGN-GYFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGA 141 (350)
T ss_dssp -TTEEEEEECSCSCCTTBTTTCCSCCCE-ECSSCEEST-TEEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBS
T ss_pred -ccceeeccCCCChhhhhhhcCCcCCEE-EECCEEECC-CCeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeE
Confidence 566655555443334444432211111 0100 1233 2688999999998888899999999999999998543
No 418
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=28.95 E-value=2.6e+02 Score=23.51 Aligned_cols=64 Identities=11% Similarity=0.094 Sum_probs=40.1
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
-++.+.+.||+-|=++-+.+++. |. .+.++++++.+.-+...| .... ++.++. .|..+|||.|=
T Consensus 77 ~A~~y~~~GA~~isvltd~~~f~-Gs----~~~l~~ir~~v~lPvl~k----dfii-d~~qv~----~A~~~GAD~Vl 140 (272)
T 3qja_A 77 LAQAYQDGGARIVSVVTEQRRFQ-GS----LDDLDAVRASVSIPVLRK----DFVV-QPYQIH----EARAHGADMLL 140 (272)
T ss_dssp HHHHHHHTTCSEEEEECCGGGHH-HH----HHHHHHHHHHCSSCEEEE----SCCC-SHHHHH----HHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEecChhhcC-CC----HHHHHHHHHhCCCCEEEC----cccc-CHHHHH----HHHHcCCCEEE
Confidence 45667778999998887776655 33 346777777765323333 2223 555564 34568999874
No 419
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=28.89 E-value=2.4e+02 Score=24.30 Aligned_cols=80 Identities=8% Similarity=0.037 Sum_probs=54.0
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 123 LLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~-~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
..+..+.+++..++ .|.+-+-+=+.. ++.+.-.+=+++++++.++. +.+++....=-+.++-.+.++...+.
T Consensus 142 ~~~~~~~~~~~~~~~~G~~~~KiKvg~-----~~~~~d~~~v~avR~~~g~~--~~l~vDan~~~~~~~a~~~~~~l~~~ 214 (370)
T 1chr_A 142 DTKRDLDSAVEMIERRRHNRFKVKLGF-----RSPQDDLIHMEALSNSLGSK--AYLRVDVNQAWDEQVASVYIPELEAL 214 (370)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEEECSS-----SCSHHHHHHHHHHHHHSSTT--CCEEEECTTCCCTTHHHHHTHHHHTT
T ss_pred CcHHHHHHHHHHHHHCCCCEEEEecCC-----CCHHHHHHHHHHHHHhcCCC--CEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 45666778888888 798887764321 24555666788888888752 44556644333667777777777888
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|.+||--+
T Consensus 215 ~i~~iEqP 222 (370)
T 1chr_A 215 GVELIEQP 222 (370)
T ss_dssp TEEEEECC
T ss_pred CCCEEECC
Confidence 99998644
No 420
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=28.75 E-value=1.5e+02 Score=25.46 Aligned_cols=76 Identities=11% Similarity=0.013 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG 202 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG 202 (214)
+.+.-..+++.+++.|.+-+.+=+. .+.-.+=++++++++|+. +.+.+....--+.++ .+..+...+.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~~--------~~~~~e~v~avr~~~g~~--~~l~vDan~~~~~~~-~~~~~~l~~~~ 209 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKIE--------PGWDVEPVRAVRERFGDD--VLLQVDANTAYTLGD-APQLARLDPFG 209 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECB--------TTBSHHHHHHHHHHHCTT--SEEEEECTTCCCGGG-HHHHHTTGGGC
T ss_pred CHHHHHHHHHHHHHhCccEEEEecC--------chhHHHHHHHHHHhcCCC--ceEEEeccCCCCHHH-HHHHHHHHhcC
Confidence 5677778999999999998887432 133346678888888753 345566543226666 67777777889
Q ss_pred CCEEEcC
Q psy965 203 SDFIKTS 209 (214)
Q Consensus 203 aDFIKTS 209 (214)
.+||--.
T Consensus 210 i~~iE~P 216 (368)
T 1sjd_A 210 LLLIEQP 216 (368)
T ss_dssp CSEEECC
T ss_pred CCeEeCC
Confidence 9998643
No 421
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=28.68 E-value=76 Score=26.81 Aligned_cols=35 Identities=11% Similarity=0.130 Sum_probs=29.5
Q ss_pred EEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 176 MKTILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 176 lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
+-||-|-|-..+.+...+.++.+.++|+|+||-.|
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~ 58 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGA 58 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBS
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEe
Confidence 67888888888888888888888999999998655
No 422
>1lxn_A Hypothetical protein MTH1187; hypothetical structure, structural genomics, PSI, protein ST initiative; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.48.1
Probab=28.67 E-value=35 Score=24.82 Aligned_cols=76 Identities=17% Similarity=0.078 Sum_probs=50.4
Q ss_pred CCCCCCC--CHHHHHHHHHHHHHCCCCEEEEecCh-hHhhcC-ChhHHHHHHHHHHHHhcC---C---ceEEEEEeccCC
Q psy965 116 GFPSGQY--LLETRLHEIELLAKQKVDEVDIVIQR-SLVLNN-QWPELFSEVKQMKEKCGE---K---IHMKTILAVGEL 185 (214)
Q Consensus 116 gFP~G~~--~~~~K~~E~~~Ai~~GAdEID~Vin~-~~l~sg-~~~~v~~Ei~~v~~a~~~---~---~~lKvIlEt~~L 185 (214)
=+|.|.. ....=++++.+.++. .-+.+.+|- |-...| +|+++.+=++++-+++.. + ..+|+=.=.+.-
T Consensus 8 v~Plg~~~~svs~~Va~~i~~i~~--sgl~y~~~pm~T~iEG~e~devm~vv~~~~e~~~~~G~~Rv~~~iKid~R~d~~ 85 (99)
T 1lxn_A 8 VIPLGTCSTSLSSYVAAAVEALKK--LNVRYEISGMGTLLEAEDLDELMEAVKAAHEAVLQAGSDRVYTTLKIDDRRDAD 85 (99)
T ss_dssp EEESSCSSSCCHHHHHHHHHHHTT--SSCEEEEETTEEEEEESSHHHHHHHHHHHHHHHHHTTCSEEEEEEEEEEESSSC
T ss_pred EEecCCCCCcHHHHHHHHHHHHHH--cCCCeEeCCCeeEEECCCHHHHHHHHHHHHHHHHHcCCCeEEEEEEEEecCCCC
Confidence 3688853 566667788888873 556777665 778899 999999999998888752 1 245553333322
Q ss_pred CCHHHHHH
Q psy965 186 KTSENIYC 193 (214)
Q Consensus 186 ~t~e~i~~ 193 (214)
.+.+++.+
T Consensus 86 ~~~~~Kv~ 93 (99)
T 1lxn_A 86 RGLRDKVE 93 (99)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 25555433
No 423
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=28.62 E-value=1.4e+02 Score=23.94 Aligned_cols=69 Identities=12% Similarity=0.082 Sum_probs=39.2
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
-++.+.+.||+.|-+. +...-..+... -.+.+++++ . ..+.+|+-.+ +.+.+.+.+ +.++|+|.|--+
T Consensus 35 ~a~~~~~~Gad~i~v~-d~~~~~~~~~~-~~~~i~~i~-~----~~ipvi~~Gg-i~~~~~~~~----~~~~Gad~V~lg 102 (241)
T 1qo2_A 35 LVEKLIEEGFTLIHVV-DLSNAIENSGE-NLPVLEKLS-E----FAEHIQIGGG-IRSLDYAEK----LRKLGYRRQIVS 102 (241)
T ss_dssp HHHHHHHTTCCCEEEE-EHHHHHHCCCT-THHHHHHGG-G----GGGGEEEESS-CCSHHHHHH----HHHTTCCEEEEC
T ss_pred HHHHHHHcCCCEEEEe-cccccccCCch-hHHHHHHHH-h----cCCcEEEECC-CCCHHHHHH----HHHCCCCEEEEC
Confidence 4666778999999864 55442222211 123334443 2 3456777766 447666544 445799988654
Q ss_pred C
Q psy965 210 G 210 (214)
Q Consensus 210 T 210 (214)
+
T Consensus 103 ~ 103 (241)
T 1qo2_A 103 S 103 (241)
T ss_dssp H
T ss_pred c
Confidence 3
No 424
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=28.53 E-value=1.6e+02 Score=25.35 Aligned_cols=65 Identities=17% Similarity=0.013 Sum_probs=37.5
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCC-ceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEK-IHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~-~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
.|+++|++.|||-|=+ =| ... ++++.+++..+++ ..+++. -+|=+ |.+++.. ..++|+|+|-
T Consensus 208 ee~~~A~~aGaD~I~l-d~------~~~----~~l~~~v~~l~~~~~~~~I~-ASGGI-t~~ni~~----~~~aGaD~i~ 270 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLL-DN------FKP----EELHPTATVLKAQFPSVAVE-ASGGI-TLDNLPQ----FCGPHIDVIS 270 (299)
T ss_dssp HHHHHHHHTTCSEEEE-ES------CCH----HHHHHHHHHHHHHCTTSEEE-EESSC-CTTTHHH----HCCTTCCEEE
T ss_pred HHHHHHHHcCCCEEEE-CC------CCH----HHHHHHHHHhhccCCCeeEE-EECCC-CHHHHHH----HHHCCCCEEE
Confidence 5888899999875432 12 233 3444444333210 124433 34557 7677753 3578999998
Q ss_pred cCC
Q psy965 208 TSG 210 (214)
Q Consensus 208 TST 210 (214)
+|+
T Consensus 271 vGs 273 (299)
T 2jbm_A 271 MGM 273 (299)
T ss_dssp CTH
T ss_pred ECh
Confidence 775
No 425
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=28.43 E-value=1.8e+02 Score=24.89 Aligned_cols=91 Identities=19% Similarity=0.233 Sum_probs=52.1
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHh--------hc-------CCh-hHHHHHHHHHHHH
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLV--------LN-------NQW-PELFSEVKQMKEK 169 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l--------~s-------g~~-~~v~~Ei~~v~~a 169 (214)
.++||..=.+|| |.+ ..+++.+.+.|||-|++. |.|.- .. .++ -.-.+-|..++++
T Consensus 177 ~~~Pv~vK~~~~--~~~-----~~~a~~a~~~Gad~I~v~-~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~ 248 (349)
T 1p0k_A 177 VSVPVIVKEVGF--GMS-----KASAGKLYEAGAAAVDIG-GYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSE 248 (349)
T ss_dssp CSSCEEEEEESS--CCC-----HHHHHHHHHHTCSEEEEE-C---------------CCGGGGTTCSCCHHHHHHHHHHH
T ss_pred cCCCEEEEecCC--CCC-----HHHHHHHHHcCCCEEEEc-CCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHh
Confidence 456655531233 433 467889999999999876 32210 10 011 0122345556655
Q ss_pred hcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 170 CGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 170 ~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
++ .+.||.+-| +.+.+.+.++- .+|||.|--+|.|
T Consensus 249 ~~---~ipvia~GG-I~~~~d~~k~l----~~GAd~V~iG~~~ 283 (349)
T 1p0k_A 249 FP---ASTMIASGG-LQDALDVAKAI----ALGASCTGMAGHF 283 (349)
T ss_dssp CT---TSEEEEESS-CCSHHHHHHHH----HTTCSEEEECHHH
T ss_pred cC---CCeEEEECC-CCCHHHHHHHH----HcCCCEEEEcHHH
Confidence 43 266787777 54888886553 4699999766643
No 426
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=28.20 E-value=1.4e+02 Score=25.91 Aligned_cols=86 Identities=10% Similarity=0.021 Sum_probs=52.9
Q ss_pred cCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccC---------
Q psy965 115 AGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGE--------- 184 (214)
Q Consensus 115 igFP~-G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~--------- 184 (214)
.|+|. |..+.+.-+.-++. +..|++-. ++.|...- -|+...+.+=++.+.+ .|- --|-||-+.
T Consensus 64 ~G~pD~~~vt~~em~~~~~~-I~r~~~~p-viaD~d~G-yg~~~~v~~~v~~l~~-aGa---agv~iED~~~~krcGh~~ 136 (305)
T 3ih1_A 64 KGLPDLGIVTSTEVAERARD-LVRATDLP-VLVDIDTG-FGGVLNVARTAVEMVE-AKV---AAVQIEDQQLPKKCGHLN 136 (305)
T ss_dssp HTCCSSSCSCHHHHHHHHHH-HHHHHCCC-EEEECTTC-SSSHHHHHHHHHHHHH-TTC---SEEEEECBCSSCCTTCTT
T ss_pred CCCCCCCcCCHHHHHHHHHH-HHHhcCCC-EEEECCCC-CCCHHHHHHHHHHHHH-hCC---cEEEECCCCCCcccCCCC
Confidence 48997 45677776655543 44444433 55554431 2566666666666665 332 345588875
Q ss_pred ---CCCHHHHHHHHHHHHHcCCCEEE
Q psy965 185 ---LKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 185 ---L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
|-+.++...-.+.+.+||.||+-
T Consensus 137 gk~l~~~~e~~~rI~Aa~~A~~~~~I 162 (305)
T 3ih1_A 137 GKKLVTTEELVQKIKAIKEVAPSLYI 162 (305)
T ss_dssp CCCBCCHHHHHHHHHHHHHHCTTSEE
T ss_pred CCcccCHHHHHHHHHHHHHcCCCeEE
Confidence 44556777777888888888864
No 427
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=28.15 E-value=2.9e+02 Score=23.88 Aligned_cols=91 Identities=14% Similarity=0.036 Sum_probs=49.1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEE---ecC--hhHhhcC---ChhHHHHHHHHHHHHhc--CCceEEEEEeccC
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDI---VIQ--RSLVLNN---QWPELFSEVKQMKEKCG--EKIHMKTILAVGE 184 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~---Vin--~~~l~sg---~~~~v~~Ei~~v~~a~~--~~~~lKvIlEt~~ 184 (214)
++.|+|+...+.-..-++...+.||.-|=+ +.+ .|.+..+ ..++..+=|++.+++.. + ..+=+|-=|.-
T Consensus 85 aD~d~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~-~d~~I~ARTDa 163 (302)
T 3fa4_A 85 ADADTGYGGPIMVARTTEQYSRSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIG-SDIVVIARTDS 163 (302)
T ss_dssp EECTTTTSSHHHHHHHHHHHHHTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHT-CCCEEEEEECC
T ss_pred EECCCCCCCHHHHHHHHHHHHHcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcC-CCEEEEEEecc
Confidence 689999876655455577788899887633 211 0111111 34555666777776652 2 23434433433
Q ss_pred CC--CHHHHHHHHHHHHHcCCCEE
Q psy965 185 LK--TSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 185 L~--t~e~i~~A~~ia~~aGaDFI 206 (214)
+. ..++-.+=++...+||||-|
T Consensus 164 ~~~~gldeAi~Ra~ay~eAGAD~i 187 (302)
T 3fa4_A 164 LQTHGYEESVARLRAARDAGADVG 187 (302)
T ss_dssp HHHHCHHHHHHHHHHHHTTTCSEE
T ss_pred cccCCHHHHHHHHHHHHHcCCCEE
Confidence 21 22333333456778999976
No 428
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=28.11 E-value=2.7e+02 Score=23.38 Aligned_cols=71 Identities=14% Similarity=-0.019 Sum_probs=34.3
Q ss_pred cCCCCCCC--CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHH--H
Q psy965 115 AGFPSGQY--LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE--N 190 (214)
Q Consensus 115 igFP~G~~--~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e--~ 190 (214)
+|+|+..- .-.+-..-...|++.|. +.+.+.+.++++++.. + +.+|+. +|++.-. -
T Consensus 48 lG~PfsdP~adGp~Iq~a~~~Al~~G~---------------~~~~~~~~v~~ir~~~-~---~Pii~m-~y~n~v~~~g 107 (271)
T 1ujp_A 48 IGLPYSDPLGDGPVIQRASELALRKGM---------------SVQGALELVREVRALT-E---KPLFLM-TYLNPVLAWG 107 (271)
T ss_dssp EECCCCC----CHHHHHHHHHHHHTTC---------------CHHHHHHHHHHHHHHC-C---SCEEEE-CCHHHHHHHC
T ss_pred ECCCCCCcccccHHHHHHHHHHHHcCC---------------CHHHHHHHHHHHHhcC-C---CCEEEE-ecCcHHHHhh
Confidence 37777521 11223334456666772 2345566677777652 2 234442 4442100 1
Q ss_pred HHHHHHHHHHcCCCE
Q psy965 191 IYCASMTAMFAGSDF 205 (214)
Q Consensus 191 i~~A~~ia~~aGaDF 205 (214)
..+-++.|.++|+|.
T Consensus 108 ~~~f~~~~~~aG~dG 122 (271)
T 1ujp_A 108 PERFFGLFKQAGATG 122 (271)
T ss_dssp HHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCCE
Confidence 234566677777773
No 429
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=27.85 E-value=2.8e+02 Score=23.45 Aligned_cols=92 Identities=10% Similarity=0.017 Sum_probs=63.6
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe----c
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA----V 182 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE----t 182 (214)
.++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- ++= +-. |
T Consensus 77 rvpviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~l--Pii-lYn~P~~t 146 (301)
T 3m5v_A 77 KVKVLAG-----AGSNATHEAVGLAKFAKEHGADGILSVAPY-YNK-PTQQGLYEHYKAIAQSVDI--PVL-LYNVPGRT 146 (301)
T ss_dssp SCEEEEE-----CCCSSHHHHHHHHHHHHHTTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHCSS--CEE-EEECHHHH
T ss_pred CCeEEEe-----CCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-CCC-CCHHHHHHHHHHHHHhCCC--CEE-EEeCchhh
Confidence 5665544 267788888999999999999999777554 334 3568899999999988742 221 222 4
Q ss_pred cCCCCHHHHHHHHHHHHH-cCCCEEEcCCC
Q psy965 183 GELKTSENIYCASMTAMF-AGSDFIKTSGS 211 (214)
Q Consensus 183 ~~L~t~e~i~~A~~ia~~-aGaDFIKTSTG 211 (214)
|.--+.+.+.+.+ .. -..-.||=|+|
T Consensus 147 g~~l~~~~~~~La---~~~pnivgiKdssg 173 (301)
T 3m5v_A 147 GCEISTDTIIKLF---RDCENIYGVKEASG 173 (301)
T ss_dssp SCCCCHHHHHHHH---HHCTTEEEEEECSS
T ss_pred CcCCCHHHHHHHH---hcCCCEEEEEeCCC
Confidence 4333667765544 44 57788998877
No 430
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=27.69 E-value=2.3e+02 Score=22.75 Aligned_cols=84 Identities=13% Similarity=0.018 Sum_probs=46.4
Q ss_pred cCCCCCC-CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEecc-----CCCC-
Q psy965 115 AGFPSGQ-YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVG-----ELKT- 187 (214)
Q Consensus 115 igFP~G~-~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~-----~L~t- 187 (214)
..|+.-. .+++.. ++.+.+.|.+-|++.... +. ++ -.+++.++++++.. ..+++..-.+ .+.+
T Consensus 9 ~~~~~~~~~~~~~~---l~~~~~~G~~~vEl~~~~--~~--~~--~~~~~~~~~~~l~~-~gl~i~~~~~~~~~~~l~~~ 78 (294)
T 3vni_A 9 AYWEQEWEADYKYY---IEKVAKLGFDILEIAASP--LP--FY--SDIQINELKACAHG-NGITLTVGHGPSAEQNLSSP 78 (294)
T ss_dssp GGGCSSSCCCHHHH---HHHHHHHTCSEEEEESTT--GG--GC--CHHHHHHHHHHHHH-TTCEEEEEECCCGGGCTTCS
T ss_pred hhhcCCcCcCHHHH---HHHHHHcCCCEEEecCcc--cC--Cc--CHHHHHHHHHHHHH-cCCeEEEeecCCCCcCCCCC
Confidence 3555321 244444 455667899999998653 11 11 12345555555433 2344443111 1211
Q ss_pred --------HHHHHHHHHHHHHcCCCEEEc
Q psy965 188 --------SENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 188 --------~e~i~~A~~ia~~aGaDFIKT 208 (214)
.+.+.++.++|...|+++|.+
T Consensus 79 d~~~r~~~~~~~~~~i~~a~~lG~~~v~~ 107 (294)
T 3vni_A 79 DPDIRKNAKAFYTDLLKRLYKLDVHLIGG 107 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence 134567888999999999973
No 431
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=27.66 E-value=1.6e+02 Score=24.93 Aligned_cols=77 Identities=16% Similarity=0.236 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
.+.+.-+.+++++.+.|+++|-++-.-.-....+.+.+.+=++.+++..+ . .+-+..+.+ +.+.+. ...++
T Consensus 91 ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~~~~~~~~~l~~~ik~~~~--i--~i~~s~g~~-~~e~l~----~L~~a 161 (350)
T 3t7v_A 91 LTMEEIKETCKTLKGAGFHMVDLTMGEDPYYYEDPNRFVELVQIVKEELG--L--PIMISPGLM-DNATLL----KAREK 161 (350)
T ss_dssp CCHHHHHHHHHHHTTSCCSEEEEEECCCHHHHHSTHHHHHHHHHHHHHHC--S--CEEEECSSC-CHHHHH----HHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeCCCCccccCHHHHHHHHHHHHhhcC--c--eEEEeCCCC-CHHHHH----HHHHc
Confidence 47788888999999999999877532211111134556666666665432 2 334556666 655553 34567
Q ss_pred CCCEEE
Q psy965 202 GSDFIK 207 (214)
Q Consensus 202 GaDFIK 207 (214)
|.|.+-
T Consensus 162 G~~~i~ 167 (350)
T 3t7v_A 162 GANFLA 167 (350)
T ss_dssp TEEEEE
T ss_pred CCCEEE
Confidence 887653
No 432
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=27.65 E-value=3e+02 Score=23.83 Aligned_cols=87 Identities=10% Similarity=0.052 Sum_probs=58.0
Q ss_pred CcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHH
Q psy965 90 FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKE 168 (214)
Q Consensus 90 ~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~ 168 (214)
+..++..+.+.|+ ..+++|+-. |+ .-..+++.|.+.||+-|++ .-|.+-.. +.+...+|+..+++
T Consensus 140 ~~~~L~~~i~~L~--~~GIrVSLF-ID---------pd~~qI~aA~~~GAd~IEL--hTG~YA~a~~~~~~~~el~rl~~ 205 (278)
T 3gk0_A 140 HFDAVRAACKQLA--DAGVRVSLF-ID---------PDEAQIRAAHETGAPVIEL--HTGRYADAHDAAEQQREFERIAT 205 (278)
T ss_dssp THHHHHHHHHHHH--HTTCEEEEE-EC---------SCHHHHHHHHHHTCSEEEE--CCHHHHTCSSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH--HCCCEEEEE-eC---------CCHHHHHHHHHhCcCEEEE--ecchhhccCCchhHHHHHHHHHH
Confidence 4556777888888 578887777 43 2345889999999998876 45555443 22446678888887
Q ss_pred HhcC--CceEEEEEeccCCCCHHHHH
Q psy965 169 KCGE--KIHMKTILAVGELKTSENIY 192 (214)
Q Consensus 169 a~~~--~~~lKvIlEt~~L~t~e~i~ 192 (214)
++.. ..-|+|=--=| | +++++.
T Consensus 206 aA~~A~~lGL~VnAGHG-L-~y~Nv~ 229 (278)
T 3gk0_A 206 GVDAGIALGLKVNAGHG-L-HYTNVQ 229 (278)
T ss_dssp HHHHHHHTTCEEEECTT-C-CTTTHH
T ss_pred HHHHHHHcCCEEecCCC-C-CHHHHH
Confidence 7631 13466666555 5 667764
No 433
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=27.65 E-value=1.4e+02 Score=26.91 Aligned_cols=70 Identities=13% Similarity=0.129 Sum_probs=44.8
Q ss_pred HHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC-Cce
Q psy965 97 GSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-KIH 175 (214)
Q Consensus 97 a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~-~~~ 175 (214)
+...+++ .+++|+.+= |.+ .-|+ +..|++.|+|- +=||.|.+-+ .+. +++++++|.+ +.+
T Consensus 75 al~~I~~-~~~vPlvaD---iHf-----~~~l--al~a~e~G~dk--lRINPGNig~--~~~----~~~vv~~ak~~~~p 135 (366)
T 3noy_A 75 ALEEIVK-KSPMPVIAD---IHF-----APSY--AFLSMEKGVHG--IRINPGNIGK--EEI----VREIVEEAKRRGVA 135 (366)
T ss_dssp HHHHHHH-HCSSCEEEE---CCS-----CHHH--HHHHHHTTCSE--EEECHHHHSC--HHH----HHHHHHHHHHHTCE
T ss_pred HHHHHHh-cCCCCEEEe---CCC-----CHHH--HHHHHHhCCCe--EEECCcccCc--hhH----HHHHHHHHHHcCCC
Confidence 3334433 466776544 333 2233 44589999999 7899998853 333 4556666643 489
Q ss_pred EEEEEeccCC
Q psy965 176 MKTILAVGEL 185 (214)
Q Consensus 176 lKvIlEt~~L 185 (214)
+.+-+-.|-|
T Consensus 136 iRIGvN~GSL 145 (366)
T 3noy_A 136 VRIGVNSGSL 145 (366)
T ss_dssp EEEEEEGGGC
T ss_pred EEEecCCcCC
Confidence 9999888877
No 434
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=27.58 E-value=2.7e+02 Score=23.34 Aligned_cols=93 Identities=10% Similarity=0.028 Sum_probs=63.3
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|.+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- -+|| .
T Consensus 68 grvpviaG-----vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~l----PiilYn~P~ 136 (294)
T 2ehh_A 68 GRIKVIAG-----TGGNATHEAVHLTAHAKEVGADGALVVVPY-YNK-PTQRGLYEHFKTVAQEVDI----PIIIYNIPS 136 (294)
T ss_dssp TSSEEEEE-----CCCSCHHHHHHHHHHHHHTTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHCCS----CEEEEECHH
T ss_pred CCCcEEEe-----cCCCCHHHHHHHHHHHHhcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhcCC----CEEEEeCCc
Confidence 35665544 266778888899999999999998777664 334 4668899999999887742 3333 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ ..-..-.||=|+|
T Consensus 137 ~tg~~l~~~~~~~La~--~~pnivgiKds~g 165 (294)
T 2ehh_A 137 RTCVEISVDTMFKLAS--ECENIVASKESTP 165 (294)
T ss_dssp HHSCCCCHHHHHHHHH--HCTTEEEEEECCS
T ss_pred ccCcCCCHHHHHHHHh--hCCCEEEEEeCCC
Confidence 454226677765541 2356777887776
No 435
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=27.57 E-value=44 Score=30.54 Aligned_cols=80 Identities=11% Similarity=0.128 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhH-------------hhcCC--hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHH
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSL-------------VLNNQ--WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSE 189 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~-------------l~sg~--~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e 189 (214)
+.-..-++.+.+.|||-| +|.|... -+||. |..-.+-|.++++++++ .+-||- +|-..+.+
T Consensus 283 ~~i~~iA~~a~~aGaDgI-iv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~--~iPIIg-~GGI~s~e 358 (415)
T 3i65_A 283 EQKKEIADVLLETNIDGM-IISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK--QIPIIA-SGGIFSGL 358 (415)
T ss_dssp HHHHHHHHHHHHHTCSEE-EECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTT--CSCEEE-CSSCCSHH
T ss_pred HHHHHHHHHHHHcCCcEE-EEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCC--CCCEEE-ECCCCCHH
Confidence 344555677778999998 5677542 12343 34445677888887764 244454 55566877
Q ss_pred HHHHHHHHHHHcCCCEEEcCCCC
Q psy965 190 NIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 190 ~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+.++ +++|||+|.-.||+
T Consensus 359 Da~e~----l~aGAd~VqIgra~ 377 (415)
T 3i65_A 359 DALEK----IEAGASVCQLYSCL 377 (415)
T ss_dssp HHHHH----HHHTEEEEEESHHH
T ss_pred HHHHH----HHcCCCEEEEcHHH
Confidence 66543 34899999988875
No 436
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=27.45 E-value=53 Score=28.39 Aligned_cols=40 Identities=20% Similarity=0.171 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 159 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 159 v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.+-+++.++.+++ ..|+.+|+. |.++...| .++|+|||-
T Consensus 179 i~~av~~ar~~~~~--~~~I~VEV~---tleea~eA----~~aGaD~I~ 218 (285)
T 1o4u_A 179 AERAVQEVRKIIPF--TTKIEVEVE---NLEDALRA----VEAGADIVM 218 (285)
T ss_dssp HHHHHHHHHTTSCT--TSCEEEEES---SHHHHHHH----HHTTCSEEE
T ss_pred HHHHHHHHHHhCCC--CceEEEEeC---CHHHHHHH----HHcCCCEEE
Confidence 44455555554443 368888876 55777655 568999984
No 437
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=27.27 E-value=3.2e+02 Score=24.00 Aligned_cols=88 Identities=8% Similarity=0.038 Sum_probs=59.5
Q ss_pred CCCHHHHHHHH-HHHHHCCCCEEEEecChhH-hhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHH
Q psy965 121 QYLLETRLHEI-ELLAKQKVDEVDIVIQRSL-VLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTA 198 (214)
Q Consensus 121 ~~~~~~K~~E~-~~Ai~~GAdEID~Vin~~~-l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia 198 (214)
..+.+.-+.++ +.+++.|.+-+-+=+.... ....+.+.-.+=+++++++.++ -+.+++....=-+.++-.+.++..
T Consensus 137 ~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~--~~~l~vDaN~~~~~~~A~~~~~~L 214 (393)
T 4dwd_A 137 ARSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGP--DAVIGFDANNGYSVGGAIRVGRAL 214 (393)
T ss_dssp SSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCT--TCCEEEECTTCCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHHHHHHH
Confidence 35577777888 9999999999887542100 0011456666667888888875 245566654433778777878888
Q ss_pred HHcCCCEEEcCC
Q psy965 199 MFAGSDFIKTSG 210 (214)
Q Consensus 199 ~~aGaDFIKTST 210 (214)
.+.|.+||--..
T Consensus 215 ~~~~i~~iEqP~ 226 (393)
T 4dwd_A 215 EDLGYSWFEEPV 226 (393)
T ss_dssp HHTTCSEEECCS
T ss_pred HhhCCCEEECCC
Confidence 889999997543
No 438
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=27.25 E-value=1.6e+02 Score=25.75 Aligned_cols=50 Identities=10% Similarity=0.025 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 156 WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 156 ~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
++++..-++.|+.++++ .++=+=+|+|| ++.+++.+.++..+++|++-||
T Consensus 85 ~~em~~~~~~I~r~~~~-~PviaD~d~Gy-g~~~~v~~tv~~l~~aGaagv~ 134 (318)
T 1zlp_A 85 TTEVVEATRRITAAAPN-LCVVVDGDTGG-GGPLNVQRFIRELISAGAKGVF 134 (318)
T ss_dssp HHHHHHHHHHHHHHSSS-SEEEEECTTCS-SSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHhhccC-CCEEEeCCCCC-CCHHHHHHHHHHHHHcCCcEEE
Confidence 45666677777777754 67777888885 4778888877777788888877
No 439
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=26.94 E-value=3.3e+02 Score=26.22 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=55.9
Q ss_pred CCCeEEEecCC------CCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHh--cCCceEEE
Q psy965 107 YQPCLSQPAGF------PSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKC--GEKIHMKT 178 (214)
Q Consensus 107 ~v~vatV~igF------P~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~--~~~~~lKv 178 (214)
.+.++.| +. |.-..+++.|+.=++...+.|.++|++-.+...- ++ .+.++++.+.. +++..+-+
T Consensus 71 ~p~i~Dt--TLRDGeQ~~g~~~s~eeKl~Ia~~L~~lGVd~IEaGfP~asp--~D----~e~v~~i~~~~l~~~~~~i~a 142 (644)
T 3hq1_A 71 APLWCAV--DLRDGNQALIDPMSPARKRRMFDLLVRMGYKEIEVGFPSASQ--TD----FDFVREIIEQGAIPDDVTIQV 142 (644)
T ss_dssp CCEEEEC--CCCCCGGGCSSCCCHHHHHHHHHHHHHHTCSEEEEECTTTCH--HH----HHHHHHHHHTTCSCTTCEEEE
T ss_pred CCEEEEC--CCCccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCh--hH----HHHHHHHHhcCCCCCCeEEEE
Confidence 4556666 43 3345689999999999999999999998743211 12 33445555432 11233434
Q ss_pred EEeccCCCCHHHHHHHHHHHHHcCCC----EEEcC
Q psy965 179 ILAVGELKTSENIYCASMTAMFAGSD----FIKTS 209 (214)
Q Consensus 179 IlEt~~L~t~e~i~~A~~ia~~aGaD----FIKTS 209 (214)
+.- ...+.|.++.+.+..+|.+ |++||
T Consensus 143 L~r----~~~~did~a~eal~~a~~~~Vhif~stS 173 (644)
T 3hq1_A 143 LTQ----CRPELIERTFQACSGAPRAIVHFYNSTS 173 (644)
T ss_dssp EEE----SCHHHHHHHHHHHTTCSEEEEEEEEECC
T ss_pred Eec----CCHhhHHHHHHHHhcCCCCEEEEEecCC
Confidence 432 1345577777777788876 55555
No 440
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=26.76 E-value=2.6e+02 Score=22.71 Aligned_cols=88 Identities=19% Similarity=0.172 Sum_probs=50.7
Q ss_pred CCCeEEEecCCCCCCC----CHHHHHHHH-HHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe
Q psy965 107 YQPCLSQPAGFPSGQY----LLETRLHEI-ELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA 181 (214)
Q Consensus 107 ~v~vatV~igFP~G~~----~~~~K~~E~-~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE 181 (214)
++++..- ++ |.|.+ ....-..|+ +.|.+.|||-|= ++. .++++. ++++++.++ +.|+..
T Consensus 145 g~~viv~-~~-~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~--~~~----~~~~~~----l~~i~~~~~----ipvva~ 208 (273)
T 2qjg_A 145 GMPLIAM-MY-PRGKHIQNERDPELVAHAARLGAELGADIVK--TSY----TGDIDS----FRDVVKGCP----APVVVA 208 (273)
T ss_dssp TCCEEEE-EE-ECSTTCSCTTCHHHHHHHHHHHHHTTCSEEE--ECC----CSSHHH----HHHHHHHCS----SCEEEE
T ss_pred CCCEEEE-eC-CCCcccCCCCCHhHHHHHHHHHHHcCCCEEE--ECC----CCCHHH----HHHHHHhCC----CCEEEE
Confidence 4554443 33 55552 122345565 889999998533 333 245543 444554442 345555
Q ss_pred ccCCC--CHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 VGELK--TSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 t~~L~--t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
-| .. +.++..+...-++.+|++.|--+++
T Consensus 209 GG-i~~~~~~~~~~~~~~~~~~Ga~gv~vg~~ 239 (273)
T 2qjg_A 209 GG-PKTNTDEEFLQMIKDAMEAGAAGVAVGRN 239 (273)
T ss_dssp CC-SCCSSHHHHHHHHHHHHHHTCSEEECCHH
T ss_pred eC-CCCCCHHHHHHHHHHHHHcCCcEEEeeHH
Confidence 55 43 3677777677788899998866543
No 441
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=26.67 E-value=1.4e+02 Score=24.82 Aligned_cols=70 Identities=13% Similarity=0.048 Sum_probs=36.6
Q ss_pred HHHHHHHHHCCCCEEEEec--Chh-HhhcC-ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCC
Q psy965 128 LHEIELLAKQKVDEVDIVI--QRS-LVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGS 203 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vi--n~~-~l~sg-~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGa 203 (214)
..-++.+.+.||+-|++.- +.. ....| ......+.|+++++.++ .+ +|+-.. ..+.++ .+.+.++|+
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~--~P--vi~~~~-~~~~~~----~~~~~~aGa 101 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVS--IP--VMAKVR-IGHFVE----AMILEAIGV 101 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCS--SC--EEEEEE-TTCHHH----HHHHHHTTC
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcC--CC--eEEEec-cCCHHH----HHHHHHCCC
Confidence 4567778889999998731 111 11223 01112345666665443 23 333222 223333 456678999
Q ss_pred CEE
Q psy965 204 DFI 206 (214)
Q Consensus 204 DFI 206 (214)
|+|
T Consensus 102 d~v 104 (297)
T 2zbt_A 102 DFI 104 (297)
T ss_dssp SEE
T ss_pred CEE
Confidence 999
No 442
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=26.53 E-value=2.9e+02 Score=23.40 Aligned_cols=92 Identities=8% Similarity=0.017 Sum_probs=63.0
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe----
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA---- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE---- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++ +-+||=
T Consensus 83 grvpviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~----lPiilYn~P~ 151 (304)
T 3l21_A 83 DRARVIAG-----AGTYDTAHSIRLAKACAAEGAHGLLVVTPY-YSK-PPQRGLQAHFTAVADATE----LPMLLYDIPG 151 (304)
T ss_dssp TTSEEEEE-----CCCSCHHHHHHHHHHHHHHTCSEEEEECCC-SSC-CCHHHHHHHHHHHHTSCS----SCEEEEECHH
T ss_pred CCCeEEEe-----CCCCCHHHHHHHHHHHHHcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhcC----CCEEEEeCcc
Confidence 45655444 377788888999999999999998777554 344 467888888888888764 233332
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.+ ..-..-.||=|+|
T Consensus 152 ~tg~~l~~~~~~~La---~~pnIvgiKdssg 179 (304)
T 3l21_A 152 RSAVPIEPDTIRALA---SHPNIVGVXDAKA 179 (304)
T ss_dssp HHSSCCCHHHHHHHH---TSTTEEEEEECSC
T ss_pred ccCCCCCHHHHHHHh---cCCCEEEEECCCC
Confidence 34333667665444 3457778888876
No 443
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=26.45 E-value=1.1e+02 Score=31.26 Aligned_cols=80 Identities=20% Similarity=0.145 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 122 YLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 122 ~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
++.+-=+.-++.+.+.||+.|=+.=-.|. .....+++-++++++..+ +.|+.-.=+|...-...+..|++|
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~---~~P~~~~~lv~~l~~~~~------~~i~~H~Hnt~G~a~An~laA~~a 759 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAGL---LKPKAAYELIGELKSAVD------LPIHLHTHDTSGNGLLTYKQAIDA 759 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTCC---CCHHHHHHHHHHHHHHCC------SCEEEEECBTTSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccCC---CCHHHHHHHHHHHHHhcC------CeEEEEeCCCCcHHHHHHHHHHHh
Confidence 45566667788899999998755433333 246778888888887642 223333333333344556788899
Q ss_pred CCCEEEcCC
Q psy965 202 GSDFIKTSG 210 (214)
Q Consensus 202 GaDFIKTST 210 (214)
|+|.|-||-
T Consensus 760 Ga~~vD~ai 768 (1150)
T 3hbl_A 760 GVDIIDTAV 768 (1150)
T ss_dssp TCSEEEEBC
T ss_pred CCCEEEEec
Confidence 999999875
No 444
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=26.23 E-value=1.6e+02 Score=26.89 Aligned_cols=68 Identities=22% Similarity=0.186 Sum_probs=42.5
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
.++..++.|++-+ +++.. .|+...+.+.+..+++..++ .+.+|.-+ ..+.+. ++.++++|+|||+.+
T Consensus 246 ~~~~l~e~gv~~l--~Vd~~---~g~~~~~~~~i~~lk~~~~~--~~~Vi~G~--V~t~~~----a~~l~~aGad~I~Vg 312 (503)
T 1me8_A 246 RVPALVEAGADVL--CIDSS---DGFSEWQKITIGWIREKYGD--KVKVGAGN--IVDGEG----FRYLADAGADFIKIG 312 (503)
T ss_dssp HHHHHHHHTCSEE--EECCS---CCCSHHHHHHHHHHHHHHGG--GSCEEEEE--ECSHHH----HHHHHHHTCSEEEEC
T ss_pred HHHHHHhhhccce--EEecc---cCcccchhhHHHHHHHhCCC--CceEeecc--ccCHHH----HHHHHHhCCCeEEec
Confidence 3666777898863 44332 45666677888888876532 14556433 335443 346678999999874
Q ss_pred C
Q psy965 210 G 210 (214)
Q Consensus 210 T 210 (214)
.
T Consensus 313 ~ 313 (503)
T 1me8_A 313 I 313 (503)
T ss_dssp S
T ss_pred c
Confidence 4
No 445
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=26.13 E-value=84 Score=28.80 Aligned_cols=80 Identities=16% Similarity=0.095 Sum_probs=46.3
Q ss_pred HHHHHHHHHCCCCEEEEecChhHh-----hcCChhHHHHHHHHHHHHhcC-----CceEEEEEeccCCCCHHHHHHHHHH
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLV-----LNNQWPELFSEVKQMKEKCGE-----KIHMKTILAVGELKTSENIYCASMT 197 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l-----~sg~~~~v~~Ei~~v~~a~~~-----~~~lKvIlEt~~L~t~e~i~~A~~i 197 (214)
...++.+++.||+-|++-+--|.. ..|---.-..=+..+.++++. +..+-||-+-|-- +..++.+|
T Consensus 295 ~~~a~~l~~aGad~I~Vg~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~-~~~di~kA--- 370 (503)
T 1me8_A 295 GEGFRYLADAGADFIKIGIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIV-YDYHMTLA--- 370 (503)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCC-SHHHHHHH---
T ss_pred HHHHHHHHHhCCCeEEecccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCC-CHHHHHHH---
Confidence 347888999999999885533322 121111122223333344331 0146688888866 87888654
Q ss_pred HHHcCCCEEEcCCCC
Q psy965 198 AMFAGSDFIKTSGSI 212 (214)
Q Consensus 198 a~~aGaDFIKTSTGf 212 (214)
+.+|||+|--+|-|
T Consensus 371 -lalGA~~V~iG~~~ 384 (503)
T 1me8_A 371 -LAMGADFIMLGRYF 384 (503)
T ss_dssp -HHTTCSEEEESHHH
T ss_pred -HHcCCCEEEECchh
Confidence 46799998766543
No 446
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=26.07 E-value=3e+02 Score=23.23 Aligned_cols=92 Identities=11% Similarity=0.005 Sum_probs=62.8
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|-+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- -+|| .
T Consensus 68 grvpviaG-----vg~~~t~~ai~la~~A~~~Gadavlv~~P~-y~~-~s~~~l~~~f~~va~a~~l----PiilYn~P~ 136 (297)
T 2rfg_A 68 GRVPVIAG-----AGSNNPVEAVRYAQHAQQAGADAVLCVAGY-YNR-PSQEGLYQHFKMVHDAIDI----PIIVYNIPP 136 (297)
T ss_dssp TSSCBEEE-----CCCSSHHHHHHHHHHHHHHTCSEEEECCCT-TTC-CCHHHHHHHHHHHHHHCSS----CEEEEECHH
T ss_pred CCCeEEEc-----cCCCCHHHHHHHHHHHHhcCCCEEEEcCCC-CCC-CCHHHHHHHHHHHHHhcCC----CEEEEeCcc
Confidence 35665544 266778888889999999999998777654 444 3668899999999888742 2333 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ .-..-.||=|+|
T Consensus 137 ~tg~~l~~~~~~~La~---~pnIvgiKds~g 164 (297)
T 2rfg_A 137 RAVVDIKPETMARLAA---LPRIVGVKDATT 164 (297)
T ss_dssp HHSCCCCHHHHHHHHT---STTEEEEEECSC
T ss_pred ccCCCCCHHHHHHHHc---CCCEEEEEeCCC
Confidence 453226677765543 356777888876
No 447
>1yqh_A DUF77, IG hypothetical 16092; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.70A {Bacillus cereus atcc 14579} SCOP: d.58.48.1
Probab=26.07 E-value=40 Score=25.08 Aligned_cols=54 Identities=15% Similarity=0.186 Sum_probs=41.1
Q ss_pred CCCCCCC-CHHHHHHHHHHHHHCCCCEEEEecCh-hHhhcCChhHHHHHHHHHHHHhc
Q psy965 116 GFPSGQY-LLETRLHEIELLAKQKVDEVDIVIQR-SLVLNNQWPELFSEVKQMKEKCG 171 (214)
Q Consensus 116 gFP~G~~-~~~~K~~E~~~Ai~~GAdEID~Vin~-~~l~sg~~~~v~~Ei~~v~~a~~ 171 (214)
=+|.|.. ....=++++...++. ..+++.+|- |-...|+|+++.+=++++-+++.
T Consensus 14 v~Plg~~~svs~~Va~~i~vl~~--sGl~y~~~pmgT~IEGe~devm~vv~~~~e~~~ 69 (109)
T 1yqh_A 14 VVPQAKTKDVYSVVDKAIEVVQQ--SGVRYEVGAMETTLEGELDVLLDVVKRAQQACV 69 (109)
T ss_dssp EEEECSSSCHHHHHHHHHHHHHH--SCSEEEECSSCEEEEECHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCcHHHHHHHHHHHHHH--cCCCeEecCCccEEEcCHHHHHHHHHHHHHHHH
Confidence 4688864 466667788888863 556666665 77889999999999999888763
No 448
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=25.90 E-value=87 Score=27.56 Aligned_cols=84 Identities=15% Similarity=0.148 Sum_probs=57.6
Q ss_pred CCCCeEEEecCCCC-CC-----CCHHHHHHHHHHHHHCCCC----EEEEecChhHhhcCChhHHHHHHHHHHHHhcCCce
Q psy965 106 VYQPCLSQPAGFPS-GQ-----YLLETRLHEIELLAKQKVD----EVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIH 175 (214)
Q Consensus 106 s~v~vatV~igFP~-G~-----~~~~~K~~E~~~Ai~~GAd----EID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~ 175 (214)
.++++-....-||. |. ...+.-..-++.|.++||| =|=.- +. +++..++++|+
T Consensus 175 ~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaELGADs~~tivK~~--y~-----------e~f~~Vv~a~~---- 237 (307)
T 3fok_A 175 AQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGLGNDSSYTWMKLP--VV-----------EEMERVMESTT---- 237 (307)
T ss_dssp TTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTCSSCCSSEEEEEE--CC-----------TTHHHHGGGCS----
T ss_pred cCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHhCCCcCCCEEEeC--Cc-----------HHHHHHHHhCC----
Confidence 46776654224554 32 4678888899999999999 44432 21 46788888774
Q ss_pred EEEEEeccCCC-CHHHHHHHHHHHHH-cCCCEE
Q psy965 176 MKTILAVGELK-TSENIYCASMTAMF-AGSDFI 206 (214)
Q Consensus 176 lKvIlEt~~L~-t~e~i~~A~~ia~~-aGaDFI 206 (214)
+.|++--|.-. ++++..+-.+-+++ +|+.-+
T Consensus 238 vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv 270 (307)
T 3fok_A 238 MPTLLLGGEGGNDPDATFASWEHALTLPGVRGL 270 (307)
T ss_dssp SCEEEECCSCC--CHHHHHHHHHHTTSTTEEEE
T ss_pred CCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEE
Confidence 56677776653 56888899999999 787544
No 449
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=25.87 E-value=2.4e+02 Score=22.12 Aligned_cols=109 Identities=10% Similarity=-0.098 Sum_probs=59.3
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHH-------HHHHHHHHHHCCCCEEEEecChhH--h-hcCChhHHHH
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLET-------RLHEIELLAKQKVDEVDIVIQRSL--V-LNNQWPELFS 161 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~-------K~~E~~~Ai~~GAdEID~Vin~~~--l-~sg~~~~v~~ 161 (214)
..+...++.++ ..++++.++-..+..+....+. =..-++.|.+.|++-|=+...... . ....|+.+.+
T Consensus 46 ~~~~~~~~~l~--~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~ 123 (278)
T 1i60_A 46 HSLDDLAEYFQ--THHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVD 123 (278)
T ss_dssp SCHHHHHHHHH--TSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHH
T ss_pred CCHHHHHHHHH--HcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHH
Confidence 45667777787 5778877662222233112211 123456667789987644322110 0 0122566667
Q ss_pred HHHHHHHHhcCCceEEEEEeccC-----CCCHHHHHHHHHHHHHcCCCEE
Q psy965 162 EVKQMKEKCGEKIHMKTILAVGE-----LKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 162 Ei~~v~~a~~~~~~lKvIlEt~~-----L~t~e~i~~A~~ia~~aGaDFI 206 (214)
-++.+.+.+.. .-+++-+|+-. +.+.++. .+++...|.+.+
T Consensus 124 ~l~~l~~~a~~-~gv~l~lEn~~~~~~~~~~~~~~---~~l~~~~~~~~~ 169 (278)
T 1i60_A 124 VLTELSDIAEP-YGVKIALEFVGHPQCTVNTFEQA---YEIVNTVNRDNV 169 (278)
T ss_dssp HHHHHHHHHGG-GTCEEEEECCCCTTBSSCSHHHH---HHHHHHHCCTTE
T ss_pred HHHHHHHHHHh-cCCEEEEEecCCccchhcCHHHH---HHHHHHhCCCCe
Confidence 77777776654 46899999873 4455554 344444454433
No 450
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=25.85 E-value=3.3e+02 Score=23.76 Aligned_cols=79 Identities=11% Similarity=0.023 Sum_probs=53.5
Q ss_pred HHHHHHHHHHCCCCEEEE-ecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC-CHHHHHHHHHHHHHcCCC
Q psy965 127 RLHEIELLAKQKVDEVDI-VIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK-TSENIYCASMTAMFAGSD 204 (214)
Q Consensus 127 K~~E~~~Ai~~GAdEID~-Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~-t~e~i~~A~~ia~~aGaD 204 (214)
-..+++.+++.|.+-+=+ -+..+ ..+.+.-.+=++++++++|+ -+.+++....=- +.++-.+.++...+.|.+
T Consensus 156 ~~~~a~~~~~~G~~~~K~~k~g~~---~~~~~~d~~~v~avR~a~G~--d~~l~vDan~~~~~~~~A~~~~~~L~~~~i~ 230 (394)
T 3mqt_A 156 YKPLIAKAKERGAKAVKVCIIPND---KVSDKEIVAYLRELREVIGW--DMDMMVDCLYRWTDWQKARWTFRQLEDIDLY 230 (394)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCT---TSCHHHHHHHHHHHHHHHCS--SSEEEEECTTCCSCHHHHHHHHHHTGGGCCS
T ss_pred HHHHHHHHHHcCCCEEEecccCCC---ccCHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCCHHHHHHHHHHHhhcCCe
Confidence 345788899999998876 33211 02455556667888988875 245666755433 667766777777788999
Q ss_pred EEEcCC
Q psy965 205 FIKTSG 210 (214)
Q Consensus 205 FIKTST 210 (214)
||--+.
T Consensus 231 ~iEeP~ 236 (394)
T 3mqt_A 231 FIEACL 236 (394)
T ss_dssp EEESCS
T ss_pred EEECCC
Confidence 997543
No 451
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=25.62 E-value=1.2e+02 Score=24.68 Aligned_cols=106 Identities=9% Similarity=0.035 Sum_probs=55.9
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecC----CCCCCCCHHH-------HHHHHHHHHHCCCCEEEEecChhHh-h----cCCh
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAG----FPSGQYLLET-------RLHEIELLAKQKVDEVDIVIQRSLV-L----NNQW 156 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~ig----FP~G~~~~~~-------K~~E~~~Ai~~GAdEID~Vin~~~l-~----sg~~ 156 (214)
.+...++.++ ..++++.++... ||.+....+. =..-++.|.+.|++-| |+.-+.. . ...|
T Consensus 67 ~~~~~~~~l~--~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v--~~~~~~~~~~~~~~~~~ 142 (295)
T 3cqj_A 67 QRLALVNAIV--ETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVI--QLAGYDVYYQEANNETR 142 (295)
T ss_dssp HHHHHHHHHH--HHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEE--EECCCSCSSSCCCHHHH
T ss_pred HHHHHHHHHH--HcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEE--EECCCCCCcCcCHHHHH
Confidence 3556666776 467777665211 3455433322 1234556677899875 3331110 1 1134
Q ss_pred hHHHHHHHHHHHHhcCCceEEEEEeccC---CCCHHHHHHHHHHHHHcCCCEE
Q psy965 157 PELFSEVKQMKEKCGEKIHMKTILAVGE---LKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 157 ~~v~~Ei~~v~~a~~~~~~lKvIlEt~~---L~t~e~i~~A~~ia~~aGaDFI 206 (214)
+.+.+-++.+.+.+.. .-+++-+|+-. +.+.++. .+++...|.+.+
T Consensus 143 ~~~~~~l~~l~~~a~~-~Gv~l~lEn~~~~~~~~~~~~---~~l~~~v~~~~v 191 (295)
T 3cqj_A 143 RRFRDGLKESVEMASR-AQVTLAMEIMDYPLMNSISKA---LGYAHYLNNPWF 191 (295)
T ss_dssp HHHHHHHHHHHHHHHH-HTCEEEEECCSSGGGCSHHHH---HHHHHHHCCTTE
T ss_pred HHHHHHHHHHHHHHHH-hCCEEEEeeCCCcccCCHHHH---HHHHHhcCCCCe
Confidence 5555666666666544 45899999864 3344444 344444454433
No 452
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=25.48 E-value=3.7e+02 Score=24.11 Aligned_cols=113 Identities=13% Similarity=0.052 Sum_probs=70.2
Q ss_pred ccccCcccHHHHHHhhhcCCCCCCeEEEecCCCC-CCCCHHHHHHHHHHHHHCCCCEEEEecCh-hHhhcC-------Ch
Q psy965 86 VLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPS-GQYLLETRLHEIELLAKQKVDEVDIVIQR-SLVLNN-------QW 156 (214)
Q Consensus 86 ~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~-G~~~~~~K~~E~~~Ai~~GAdEID~Vin~-~~l~sg-------~~ 156 (214)
...+||.||.. |.. + --+ -+.|- =+.+.+.=+.|++++++.|..-|-+-..+ ...|+. .-
T Consensus 44 ~dLI~PlFV~e--------g~~-~-~~I-~SMPGv~r~sid~l~~~~~~~~~lGi~av~LFgv~~p~~KD~~gs~A~~~~ 112 (356)
T 3obk_A 44 SSLIYPLFVHD--------EET-S-VPI-PSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPD 112 (356)
T ss_dssp GGEEEEEEEES--------SSS-C-EEC-TTSTTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCGGGCBSSCGGGGCTT
T ss_pred HHceeeEEEec--------CCC-C-ccc-CCCCCceEECHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccccccCCC
Confidence 34789999874 222 2 233 45563 23467788899999999999988765332 234442 22
Q ss_pred hHHHHHHHHHHHHhcC--------------CceEEEEEe-ccCCCCHHHHHHHHHHH---HHcCCCEEEcC
Q psy965 157 PELFSEVKQMKEKCGE--------------KIHMKTILA-VGELKTSENIYCASMTA---MFAGSDFIKTS 209 (214)
Q Consensus 157 ~~v~~Ei~~v~~a~~~--------------~~~lKvIlE-t~~L~t~e~i~~A~~ia---~~aGaDFIKTS 209 (214)
..+.+=|+++++.+++ +.|.-++-+ .|+..+++-+...++.| .+||||.|--|
T Consensus 113 g~v~rAir~iK~~~P~l~VitDVcLc~YT~HGHcGil~~~~g~V~ND~Tl~~Lak~Als~A~AGADiVAPS 183 (356)
T 3obk_A 113 GLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPS 183 (356)
T ss_dssp SHHHHHHHHHHHHSTTCEEEEEECSGGGBTTCCSSCBCTTTCCBCHHHHHHHHHHHHHHHHHHTCSEEEEC
T ss_pred ChHHHHHHHHHHHCCCCEEEEeeccccccCCCcceeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCCeEecc
Confidence 3566788888887643 012222223 26666666666666555 47999999755
No 453
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=25.44 E-value=1.5e+02 Score=25.28 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=56.1
Q ss_pred HHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhH--------hhc---------CChh-HH
Q psy965 98 SDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSL--------VLN---------NQWP-EL 159 (214)
Q Consensus 98 ~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~--------l~s---------g~~~-~v 159 (214)
.+.+++ .++||..=.+| .|.+ ..+++.+.+.|+|-|++. |-+. ... .+|. ..
T Consensus 174 i~~vr~--~~~Pv~vK~v~--~g~~-----~e~a~~~~~~G~d~I~vs-~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~ 243 (332)
T 1vcf_A 174 LAELLP--LPFPVMVKEVG--HGLS-----REAALALRDLPLAAVDVA-GAGGTSWARVEEWVRFGEVRHPELCEIGIPT 243 (332)
T ss_dssp HHHHCS--CSSCEEEECSS--SCCC-----HHHHHHHTTSCCSEEECC-CBTSCCHHHHHHTC--------CCTTCSCBH
T ss_pred HHHHHc--CCCCEEEEecC--CCCC-----HHHHHHHHHcCCCEEEeC-CCCCCcchhHHHhhccccchhhhHhhccccH
Confidence 445552 45665543134 3533 245788999999999874 4321 011 0111 22
Q ss_pred HHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 160 FSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 160 ~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+-+.++++++++ +.||..-| +.+.+.+.++- ..|||+|--++.|
T Consensus 244 ~~~l~~v~~~~~~---ipvia~GG-I~~~~d~~kal----~~GAd~V~igr~~ 288 (332)
T 1vcf_A 244 ARAILEVREVLPH---LPLVASGG-VYTGTDGAKAL----ALGADLLAVARPL 288 (332)
T ss_dssp HHHHHHHHHHCSS---SCEEEESS-CCSHHHHHHHH----HHTCSEEEECGGG
T ss_pred HHHHHHHHHhcCC---CeEEEECC-CCCHHHHHHHH----HhCCChHhhhHHH
Confidence 3445666666643 55666666 55878776554 3599999888765
No 454
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=25.23 E-value=1.8e+02 Score=26.55 Aligned_cols=74 Identities=18% Similarity=0.172 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCC---CCHHHHHHHHHHHH
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGEL---KTSENIYCASMTAM 199 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L---~t~e~i~~A~~ia~ 199 (214)
+-+.++.-.+.+++.|++-||+=++.. .+.++.+.+.-+ ...|+|+---.. .+.+++.....-+.
T Consensus 77 ~~~~~~~ll~~~~~~~~~yiDvEl~~~----------~~~~~~~~~~~~--~~~kiI~S~H~f~~tp~~~~~~~~~~~~~ 144 (523)
T 2o7s_A 77 DENERRDVLRLAMELGADYIDVELQVA----------SEFIKSIDGKKP--GKFKVIVSSHNYQNTPSVEDLDGLVARIQ 144 (523)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEHHHH----------HHHHHHTTTCCC--TTCEEEEEEECSSCCCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEECCCc----------hHHHHHHHHhcc--CCCEEEEEcccCCCCcCHHHHHHHHHHHH
Confidence 346777778889999999989876542 122233332222 257999865432 24577777777777
Q ss_pred HcCCCEEEc
Q psy965 200 FAGSDFIKT 208 (214)
Q Consensus 200 ~aGaDFIKT 208 (214)
..|+|.||=
T Consensus 145 ~~gaDivKi 153 (523)
T 2o7s_A 145 QTGADIVKI 153 (523)
T ss_dssp TTTCSEEEE
T ss_pred HhCCCEEEE
Confidence 889999993
No 455
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=25.10 E-value=3.3e+02 Score=24.41 Aligned_cols=87 Identities=7% Similarity=-0.096 Sum_probs=56.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhH--------hh--------------------cCC-------hhHHHHHHHH
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSL--------VL--------------------NNQ-------WPELFSEVKQ 165 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~--------l~--------------------sg~-------~~~v~~Ei~~ 165 (214)
..+.+.-+.+++.+++.|.+-+=+=+.... +. .|. .+...+=+++
T Consensus 153 ~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~a 232 (440)
T 3t6c_A 153 GADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKSIPRLFDH 232 (440)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHHHHHHHHH
Confidence 356777888999999999988765432100 00 000 1233444778
Q ss_pred HHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 166 MKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 166 v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
++++.|+ -+.+.+....=-+.++-.+.++...+.|.+||--+
T Consensus 233 vR~a~G~--d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP 274 (440)
T 3t6c_A 233 LRNKLGF--SVELLHDAHERITPINAIHMAKALEPYQLFFLEDP 274 (440)
T ss_dssp HHHHHCS--SSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEECS
T ss_pred HHHhcCC--CCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEECC
Confidence 8888875 35677776544477777777777778899998644
No 456
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=24.89 E-value=3.8e+02 Score=24.04 Aligned_cols=133 Identities=9% Similarity=0.047 Sum_probs=83.0
Q ss_pred hhhhhcccCCCCCCCHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHh-hhcCCCCCCeEEEecCCCCCCCCHHHH
Q psy965 49 IIEFIDLTTLSGDDTEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDN-LKTKLVYQPCLSQPAGFPSGQYLLETR 127 (214)
Q Consensus 49 ~~~~ID~TlL~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~-L~~~gs~v~vatV~igFP~G~~~~~~K 127 (214)
+..++|.+.+..-.|.++......+.... +..++. +. ..+++.-+..+||- | .+.+.-
T Consensus 147 i~~~~~~~y~~d~~~~~~~~~~~~~~~~~-----------------~~~r~~~~~--~~~~p~y~~~~g~~-~-~~~e~~ 205 (441)
T 4a35_A 147 LVSCIDFRYITDVLTEEDALEILQKGQIG-----------------KKEREKQML--AQGYPAYTTSCAWL-G-YSDDTL 205 (441)
T ss_dssp HHTTCCCTTTTTTCCHHHHHHHHHHTTTT-----------------HHHHHHHHH--HHCEEEEECTTCCT-T-CCHHHH
T ss_pred ceecccccccccccchhhhhhhhhhcccc-----------------cchhhhhhc--ccCcceEEeccccC-C-CCHHHH
Confidence 34567777777777777766665555421 111111 11 12344444323542 3 356677
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
..+++.+++.|.+-+-+=+ | ++.+.-.+=+++++++.|+ -+.+.++...--+.++-.+.++...+.|..||-
T Consensus 206 ~~~a~~~~~~Gf~~~KlKv--G----~~~~~d~~~v~avR~a~G~--~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~~iE 277 (441)
T 4a35_A 206 KQLCAQALKDGWTRFKVKV--G----ADLQDDMRRCQIIRDMIGP--EKTLMMDANQRWDVPEAVEWMSKLAKFKPLWIE 277 (441)
T ss_dssp HHHHHHHHHTTCCEEEEEC--S----SCHHHHHHHHHHHHHHHCT--TSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE
T ss_pred HHHHHHHHHCCCCEEEEcC--C----CCHHHHHHHHHHHHHHhCC--CCeEEEECCCCCCHHHHHHHHHhhcccCccEEe
Confidence 7899999999999987643 2 2455555567888888875 367788876555777766777777788999986
Q ss_pred cCC
Q psy965 208 TSG 210 (214)
Q Consensus 208 TST 210 (214)
-.+
T Consensus 278 eP~ 280 (441)
T 4a35_A 278 EPT 280 (441)
T ss_dssp CCS
T ss_pred CCC
Confidence 543
No 457
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=24.85 E-value=4.8e+02 Score=25.28 Aligned_cols=154 Identities=10% Similarity=0.058 Sum_probs=85.5
Q ss_pred HHHHHHh--hhhhcccC------C-CCCCCHHHHHHHHHHhhc---cCchhhhccc-----c-cc-----Cc-ccHHHHH
Q psy965 43 KSLLLKI--IEFIDLTT------L-SGDDTEAVVETLTLKAIQ---PLSEELKEKV-----L-RG-----FV-STVWHGS 98 (214)
Q Consensus 43 ~~~l~~~--~~~ID~Tl------L-~~~~T~~~I~~lc~eA~~---~f~~~~~~~~-----~-cv-----~P-~~V~~a~ 98 (214)
+.|++.- +.+.|-|+ + ....+.++..++++.-.+ .+.. .... . |. .| .++...+
T Consensus 94 ~~~~~~~~~I~I~DTTLRDG~Qs~~~~r~~~edkl~Ia~~Ld~~Gvg~~~--IE~gGGatfd~~~~f~~e~p~e~l~~l~ 171 (718)
T 3bg3_A 94 ARAVRNHPGLLLMDTTFRDAHQSLLATRVRTHDLKKIAPYVAHNFSKLFS--MENWGGATFDVAMRFLYECPWRRLQELR 171 (718)
T ss_dssp HHHHHHCCSCEEEECTTTHHHHHHSTTCCCHHHHHHHHHHHHHHCTTCSE--EEEEETTHHHHHHHTSCCCHHHHHHHHH
T ss_pred HHHHhccCCeEEeecCCChhhCCCCCcCCCHHHHHHHHHHHHHhcCCCcE--EEecCCcchhhccccCCCCHHHHHHHHH
Confidence 6677643 55677765 2 223678887777666543 1210 0000 0 11 22 2344444
Q ss_pred HhhhcCCCCCCeEEEe-----cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCC
Q psy965 99 DNLKTKLVYQPCLSQP-----AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEK 173 (214)
Q Consensus 99 ~~L~~~gs~v~vatV~-----igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~ 173 (214)
+.+ .++++.+.. +|| -..+-......++.|++.|++.|-+....+ +.+.+..-+..+++. +
T Consensus 172 ~~~----~~~~l~~l~R~~n~vgy--~~~p~~~~~~~i~~a~~~Gvd~irIf~s~n-----~l~~l~~~i~~ak~~-G-- 237 (718)
T 3bg3_A 172 ELI----PNIPFQMLLRGANAVGY--TNYPDNVVFKFCEVAKENGMDVFRVFDSLN-----YLPNMLLGMEAAGSA-G-- 237 (718)
T ss_dssp HHC----SSSCEEEEECGGGTTSS--SCCCHHHHHHHHHHHHHHTCCEEEEECSSC-----CHHHHHHHHHHHHTT-T--
T ss_pred HHc----ccchHHHHhcccccccc--cccCCcchHHHHHHHHhcCcCEEEEEecHH-----HHHHHHHHHHHHHHc-C--
Confidence 444 345665442 232 234455566789999999999998886553 334444444444431 2
Q ss_pred ceEEEEEecc------CCC--CHHHHHHHHHHHHHcCCCEE--EcCCCC
Q psy965 174 IHMKTILAVG------ELK--TSENIYCASMTAMFAGSDFI--KTSGSI 212 (214)
Q Consensus 174 ~~lKvIlEt~------~L~--t~e~i~~A~~ia~~aGaDFI--KTSTGf 212 (214)
..+..-++.. +=+ +.+...+.++.+.++|||-| |=+.|.
T Consensus 238 ~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~ 286 (718)
T 3bg3_A 238 GVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGL 286 (718)
T ss_dssp SEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSC
T ss_pred CeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCC
Confidence 4455545443 211 66888889999999999974 444443
No 458
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=24.74 E-value=3.4e+02 Score=23.48 Aligned_cols=110 Identities=12% Similarity=-0.105 Sum_probs=0.0
Q ss_pred cHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcC--------ChhHHHHHHH
Q psy965 93 TVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN--------QWPELFSEVK 164 (214)
Q Consensus 93 ~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg--------~~~~v~~Ei~ 164 (214)
++..++..-+ +.++.+-.+ ++.|+|+...+.-..-++..++.||.-|=+==..+-=+.| ..++..+=|+
T Consensus 74 m~~~~~~i~r--~~~~~~Pvi-aD~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~ 150 (307)
T 3lye_A 74 MRDNADMIAN--LDPFGPPLI-ADMDTGYGGPIMVARTVEHYIRSGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIR 150 (307)
T ss_dssp HHHHHHHHHT--SSTTSCCEE-EECTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCCCC--------CBCCHHHHHHHHH
T ss_pred HHHHHHhhhc--cCCCCCcEE-EECCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHH
Q ss_pred HHHHHhc--CCceEEEEEeccCC--CCHHHHHHHHHHHHHcCCCEE
Q psy965 165 QMKEKCG--EKIHMKTILAVGEL--KTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 165 ~v~~a~~--~~~~lKvIlEt~~L--~t~e~i~~A~~ia~~aGaDFI 206 (214)
+.+++.. + ..+.+|-=|..+ ...++..+=++...+||||-|
T Consensus 151 Aa~~A~~~~~-~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~i 195 (307)
T 3lye_A 151 AAVATKRRLR-SDFVLIARTDALQSLGYEECIERLRAARDEGADVG 195 (307)
T ss_dssp HHHHHHHHTT-CCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHhcC-CCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEE
No 459
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=24.64 E-value=2.7e+02 Score=24.09 Aligned_cols=85 Identities=7% Similarity=-0.020 Sum_probs=47.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecChhHh-hcCC-hhHHHHHHHHHHHHhcCCceEEEE-Eecc----------CCCC
Q psy965 121 QYLLETRLHEIELLAKQKVDEVDIVIQRSLV-LNNQ-WPELFSEVKQMKEKCGEKIHMKTI-LAVG----------ELKT 187 (214)
Q Consensus 121 ~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l-~sg~-~~~v~~Ei~~v~~a~~~~~~lKvI-lEt~----------~L~t 187 (214)
..+++.++..+ .+.|.+-|++- ...+ -.+. ...-.+++.++++.+.. .-|++. +-.. .|.+
T Consensus 32 ~~~~~e~l~~a---a~~G~~~VEl~--~~~l~p~~~~~~~~~~~~~~l~~~l~~-~GL~i~~~~~~~f~~p~~~~g~l~s 105 (393)
T 1xim_A 32 ALDPVEAVHKL---AEIGAYGITFH--DDDLVPFGSDAQTRDGIIAGFKKALDE-TGLIVPMVTTNLFTHPVFKDGGFTS 105 (393)
T ss_dssp CCCHHHHHHHH---HHHTCSEEECB--HHHHSCTTCCHHHHHHHHHHHHHHHHH-HTCBCCEEECCCSSSGGGTTCSTTC
T ss_pred CCCHHHHHHHH---HHhCCCEEEee--cccCCCccccccccHHHHHHHHHHHHH-hCCEEEEEecCCcCCcccccCCCCC
Confidence 45666665544 45699999986 1111 1111 11113445555555433 234442 3322 3432
Q ss_pred -H--------HHHHHHHHHHHHcCCCEEEcCCC
Q psy965 188 -S--------ENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 188 -~--------e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
+ +.+.++.++|.+.|+.+|..-+|
T Consensus 106 pd~~~r~~~i~~~~~~i~~A~~LGa~~vv~~~G 138 (393)
T 1xim_A 106 NDRSVRRYAIRKVLRQMDLGAELGAKTLVLWGG 138 (393)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCEEEECCC
Confidence 1 35677889999999999988666
No 460
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=24.51 E-value=3.4e+02 Score=23.41 Aligned_cols=80 Identities=6% Similarity=-0.056 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhc-CCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 123 LLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG-EKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~-~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
+.+.-+.+++.+++.|.+-+-+= +|. .+.+.-.+=+++++++.| + -+++.+....--+.++..+..+...+.
T Consensus 162 ~~e~~~~~a~~~~~~G~~~~K~K--vg~---~~~~~d~~~v~avr~~~g~~--~~~l~vDaN~~~~~~~a~~~~~~l~~~ 234 (377)
T 2pge_A 162 EAAFMQEQIEAKLAEGYGCLKLK--IGA---IDFDKECALLAGIRESFSPQ--QLEIRVDANGAFSPANAPQRLKRLSQF 234 (377)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE--C------CHHHHHHHHHHHHHHSCTT--TCEEEEECTTBBCTTTHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhhhhheee--cCC---CChHHHHHHHHHHHHHcCCC--CceEEEECCCCCCHHHHHHHHHHHhcC
Confidence 45777789999999998887742 221 145555666777788776 4 367888854433556665667777788
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
+..||-=.
T Consensus 235 ~i~~iEqP 242 (377)
T 2pge_A 235 HLHSIEQP 242 (377)
T ss_dssp CCSEEECC
T ss_pred CCcEEEcc
Confidence 99998644
No 461
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=24.45 E-value=3.5e+02 Score=23.46 Aligned_cols=93 Identities=12% Similarity=0.022 Sum_probs=62.9
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE-e---
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL-A--- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl-E--- 181 (214)
..++|.+- .|...+..-+..++.|.+.|||-+=++.++ +.+ ..-+.+++-.++|.++++ +-+|| .
T Consensus 99 grvpViaG-----vg~~st~eai~la~~A~~~Gadavlv~~P~-Y~~-~s~~~l~~~f~~VA~a~~----lPiilYn~P~ 167 (343)
T 2v9d_A 99 RRVPVLIG-----TGGTNARETIELSQHAQQAGADGIVVINPY-YWK-VSEANLIRYFEQVADSVT----LPVMLYNFPA 167 (343)
T ss_dssp TSSCEEEE-----CCSSCHHHHHHHHHHHHHHTCSEEEEECCS-SSC-CCHHHHHHHHHHHHHTCS----SCEEEEECHH
T ss_pred CCCcEEEe-----cCCCCHHHHHHHHHHHHhcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhcC----CCEEEEeCch
Confidence 45666544 256778888899999999999999777654 344 366888888889988764 23444 2
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+.++ ..-..-.||=|+|
T Consensus 168 ~tg~~l~~e~~~~La~--~~pnIvgiKdssg 196 (343)
T 2v9d_A 168 LTGQDLTPALVKTLAD--SRSNIIGIKDTID 196 (343)
T ss_dssp HHSSCCCHHHHHHHHH--HCTTEEEEEECCS
T ss_pred hcCcCCCHHHHHHHHH--hCCCEEEEEeCCC
Confidence 453226676755541 2356777887776
No 462
>3qfw_A Ribulose-1,5-bisphosphate carboxylase/oxygenase L subunit; structural genomics, PSI-2, protein structure initiative; 1.79A {Rhodopseudomonas palustris}
Probab=24.44 E-value=55 Score=29.60 Aligned_cols=65 Identities=14% Similarity=0.238 Sum_probs=40.7
Q ss_pred CCCEEEEecChhHhhc--CChhHHHHHHHHHHHHhcC-C-ceEEEEEe-ccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 138 KVDEVDIVIQRSLVLN--NQWPELFSEVKQMKEKCGE-K-IHMKTILA-VGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 138 GAdEID~Vin~~~l~s--g~~~~v~~Ei~~v~~a~~~-~-~~lKvIlE-t~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
+..=.|+=++..+++. |-- --|.-+++.++. + -.+-.||= .| | +.++..+++.-+...|.||||-
T Consensus 96 ~lrL~D~~~P~~~~~~f~GP~----~Gi~g~R~~l~~~~RPllgtiiKPlG-L-s~~~~a~~~ye~~~GGlDfiKD 165 (378)
T 3qfw_A 96 DIALADVELPAHYLTAFGGPR----VGLAGIRTLTGAQSRALTASALKPQG-L-SPAALASIAHQLALGGVDLIKD 165 (378)
T ss_dssp TEEBCCCBCCHHHHHHHCCCS----SHHHHHHHHHTCSSSCEEEEEECCTT-S-CHHHHHHHHHHHHHTTCSEEEE
T ss_pred ceEEEEecCCHHHHhcCCCCC----CchHHHHHHhCCCCCceeeeeccCCc-C-CHHHHHHHHHHHHhcCCCcccC
Confidence 4566777777776653 221 124445555532 1 12333333 34 6 7899999999999999999994
No 463
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=24.42 E-value=1e+02 Score=27.03 Aligned_cols=98 Identities=17% Similarity=0.141 Sum_probs=61.9
Q ss_pred CcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHH
Q psy965 90 FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEK 169 (214)
Q Consensus 90 ~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a 169 (214)
.+..+....+.|+. .+++++-= +|-.|++++.. ......|. +=|+.+.+..=.-+.-..-+..+...
T Consensus 320 ~~~~~~~~l~~l~~--~G~~ialD--DfG~g~ssl~~-------L~~l~~d~--iKiD~~~i~~~~~~~~~~~~~~~i~~ 386 (437)
T 3hvb_A 320 YLKQAKQLTQGLAT--LHCQAAIS--QFGCSLNPFNA-------LKHLTVQF--IKIDGSFVQDLNQVENQEILKGLIAE 386 (437)
T ss_dssp THHHHHHHHHHHHH--TTCEEEEE--EETCSSSHHHH-------HTTSCCSE--EEECGGGSSCCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH--CCCEEEEc--CCCCCccHHHH-------HhhCCCCE--EEECHHHHHhHhhCcHHHHHHHHHHH
Confidence 33445555666763 56665544 88888886542 23344444 33788777644434445567777777
Q ss_pred hcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 170 CGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 170 ~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
|+. ..++||.| | ..|.++.. .+.+.|+||+.
T Consensus 387 ~~~-~~~~viae-g-VEt~~~~~----~l~~~G~~~~Q 417 (437)
T 3hvb_A 387 LHE-QQKLSIVP-F-VESASVLA----TLWQAGATYIQ 417 (437)
T ss_dssp HHH-TTCEEEEC-C-CCSHHHHH----HHHHHTCSEEE
T ss_pred HHH-cCCCEEee-e-eCCHHHHH----HHHHcCCCEec
Confidence 765 56899998 6 65766653 55677999986
No 464
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=24.23 E-value=1.8e+02 Score=25.18 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=15.9
Q ss_pred eEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 175 HMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 175 ~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
++=+=+++|+ ++.+++.+.++..+++|+.-||
T Consensus 85 PviaD~d~Gy-g~~~~v~~~v~~l~~aGaagv~ 116 (298)
T 3eoo_A 85 PLLVDIDTGW-GGAFNIARTIRSFIKAGVGAVH 116 (298)
T ss_dssp CEEEECTTCS-SSHHHHHHHHHHHHHTTCSEEE
T ss_pred eEEEECCCCC-CCHHHHHHHHHHHHHhCCeEEE
Confidence 4444445554 3445555555555555555544
No 465
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=24.06 E-value=31 Score=32.43 Aligned_cols=78 Identities=12% Similarity=0.079 Sum_probs=50.1
Q ss_pred HHHHHHHHH-CCCCEEEEecChhHhhcCChhH-HHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcC-CC
Q psy965 128 LHEIELLAK-QKVDEVDIVIQRSLVLNNQWPE-LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAG-SD 204 (214)
Q Consensus 128 ~~E~~~Ai~-~GAdEID~Vin~~~l~sg~~~~-v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aG-aD 204 (214)
+...+.+++ .|++-|=+|+... ..|.. +.++|++|.+.|+. .-+.+++..++-.-.--....-.-++..| ||
T Consensus 202 ~e~le~aI~e~ga~~i~~V~~Tt----t~y~p~~~ddI~eIaeIch~-~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD 276 (501)
T 3hl2_A 202 LKAVEAKVQELGPDCILCIHSTT----SCFAPRVPDRLEELAVICAN-YDIPHIVNNAYGVQSSKCMHLIQQGARVGRID 276 (501)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEEC----SCCTTBCCCCHHHHHHHHHH-HTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHhcCCCcEEEEEecC----CCCCCcccccHHHHHHHHHH-cCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc
Confidence 444555555 3888888885421 12221 33678888888876 56889999877644322333345577789 99
Q ss_pred EEEcCC
Q psy965 205 FIKTSG 210 (214)
Q Consensus 205 FIKTST 210 (214)
++-.|+
T Consensus 277 ~vVqS~ 282 (501)
T 3hl2_A 277 AFVQSL 282 (501)
T ss_dssp EEEEEH
T ss_pred EEEecc
Confidence 998886
No 466
>3l9c_A 3-dehydroquinate dehydratase; AROD, amino-acid biosynthesis, aromatic amino acid biosynthe schiff base, lyase; 1.60A {Streptococcus mutans}
Probab=24.06 E-value=1.9e+02 Score=24.29 Aligned_cols=86 Identities=13% Similarity=0.139 Sum_probs=47.3
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEE------
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTIL------ 180 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIl------ 180 (214)
..+||+.+ .|.+.-+. .++..+...|||-|++=+|+- ...+...+. .++.+...+ +.+|+
T Consensus 34 ~pkIcvpl----~~~t~~e~--~~~~~~~~~gaD~VElRvD~l--~~~~~~~v~---~~l~~~~~~---~PiI~T~Rt~~ 99 (259)
T 3l9c_A 34 SMKIVVPV----MPQNIEEA--NQLDLTRIDSTDIIEWRADYL--VKDDILTVA---PAIFEKFSG---HEVIFTLRTEK 99 (259)
T ss_dssp CCEEEEEE----CCSSHHHH--HHCCCTTCCTTCEEEEEGGGS--CGGGHHHHH---HHHHHHTTT---SEEEEECCBGG
T ss_pred CcEEEEEe----cCCCHHHH--HHHHHhhccCCCEEEEEeccc--cchhHHHHH---HHHHHhcCC---CcEEEEEeehh
Confidence 45666664 23333333 255555668999999999873 222222222 334443332 45555
Q ss_pred eccCCC-CHHHHHHHHHHHHH-cCCCEE
Q psy965 181 AVGELK-TSENIYCASMTAMF-AGSDFI 206 (214)
Q Consensus 181 Et~~L~-t~e~i~~A~~ia~~-aGaDFI 206 (214)
|-|... ++++-.+.-+.+.+ .|+|||
T Consensus 100 EGG~~~~~~~~y~~ll~~~~~~~~~dyI 127 (259)
T 3l9c_A 100 EGGNISLSNEDYLAIIRDIAALYQPDYI 127 (259)
T ss_dssp GTCSBCCCHHHHHHHHHHHHHHHCCSEE
T ss_pred hCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 556531 44555555555555 799998
No 467
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=23.98 E-value=1.7e+02 Score=25.21 Aligned_cols=155 Identities=13% Similarity=0.115 Sum_probs=90.9
Q ss_pred hcccCHHHHHHHHHHhhhhhhhhhHhHHHHHHHhhhhhcccC--CCCC---CCHHHHHHHHHHhhccCch--hh------
Q psy965 16 DIQINTKYLEDLTRQFEAVDLSRIKNKKSLLLKIIEFIDLTT--LSGD---DTEAVVETLTLKAIQPLSE--EL------ 82 (214)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ID~Tl--L~~~---~T~~~I~~lc~eA~~~f~~--~~------ 82 (214)
+|+||-.|..|-++.... -. -++++.+-+.+. |--+ |.+| ....||..+.+....+|.- .+
T Consensus 7 gVNIDhIAtLRnARg~~~---Pd-pv~aA~~ae~aG--dgITvHlReDrRHI~d~Dv~~L~~~~~~~lNlE~a~t~emi~ 80 (260)
T 3o6c_A 7 GVNIDHIAVLRQARMVND---PD-LLEAAFIVARHG--DQITLHVREDRRHAQDFDLENIIKFCKSPVNLECALNDEILN 80 (260)
T ss_dssp EEECHHHHHHHHHHTSCC---SC-HHHHHHHHHHHS--SEEEEECCTTCSSSCHHHHHHHHHHCSSCEEEEECSCHHHHH
T ss_pred EeecchhhhhhccCCCCC---CC-HHHHHHHHHHhC--CeEEEeeCCCcccCCHHHHHHHHHHcCCCEEeecCCCHHHHH
Confidence 688888888888777654 23 455666666666 5544 4444 4677777665544333320 00
Q ss_pred -----hcccccc----------------CcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy965 83 -----KEKVLRG----------------FVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDE 141 (214)
Q Consensus 83 -----~~~~~cv----------------~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdE 141 (214)
....+|. +..++..+.+.|+ ..+++|+-. |+ .-..+++.|.+.||+-
T Consensus 81 ial~~kP~~vtLVPEkreE~TTegGldv~~~~L~~~i~~L~--~~GIrVSLF-ID---------pd~~qi~aA~~~GAd~ 148 (260)
T 3o6c_A 81 LALKLKPHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQ--NANIEVSLF-IN---------PSLEDIEKSKILKAQF 148 (260)
T ss_dssp HHHHHCCSEEEECCCSGGGBCTTSSBCTTCTTHHHHHHHHH--HTTCEEEEE-EC---------SCHHHHHHHHHTTCSE
T ss_pred HHHHcCCCEEEECCCCCCccCCCCChhhCHHHHHHHHHHHH--HCCCEEEEE-eC---------CCHHHHHHHHHhCCCE
Confidence 0000111 5667777888888 577887777 43 2355889999999999
Q ss_pred EEEecChhHhhcCC------------------------hhHHHHHHHHHHHHhcC--CceEEEEEeccCCCCHHHHH
Q psy965 142 VDIVIQRSLVLNNQ------------------------WPELFSEVKQMKEKCGE--KIHMKTILAVGELKTSENIY 192 (214)
Q Consensus 142 ID~Vin~~~l~sg~------------------------~~~v~~Ei~~v~~a~~~--~~~lKvIlEt~~L~t~e~i~ 192 (214)
|++ .-|.+-... .....+|+..+++++.. ..-|+|=--=| | +++++.
T Consensus 149 IEL--hTG~YA~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A~~lGL~VnAGHG-L-~y~Nv~ 221 (260)
T 3o6c_A 149 IEL--HTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAAGHG-L-NYKNVK 221 (260)
T ss_dssp EEE--CCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEECTT-C-CTTTTH
T ss_pred EEE--echHhhhhhhccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEecCCC-C-CHHHHH
Confidence 886 222222100 12355688888776621 13466655555 5 666664
No 468
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=23.93 E-value=1.7e+02 Score=24.35 Aligned_cols=67 Identities=13% Similarity=0.176 Sum_probs=46.7
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcC-ChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHH
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNN-QWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYC 193 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg-~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~ 193 (214)
.|+|.=..+.+. ++...+.|||-|.+=+. .| ..+.+.+-++++++ ..+-+||++.+.+. +
T Consensus 14 ~gDP~~~~t~~~----~~~l~~~GaD~IelG~S-----~g~t~~~~~~~v~~ir~-----~~~Pivl~~y~~n~---i-- 74 (234)
T 2f6u_A 14 KLDPDRTNTDEI----IKAVADSGTDAVMISGT-----QNVTYEKARTLIEKVSQ-----YGLPIVVEPSDPSN---V-- 74 (234)
T ss_dssp EECTTSCCCHHH----HHHHHTTTCSEEEECCC-----TTCCHHHHHHHHHHHTT-----SCCCEEECCSSCCC---C--
T ss_pred eeCCCccccHHH----HHHHHHcCCCEEEECCC-----CCCCHHHHHHHHHHhcC-----CCCCEEEecCCcch---h--
Confidence 389987777654 67788899999999873 23 35567777777765 24678888876422 2
Q ss_pred HHHHHHHcCCCEE
Q psy965 194 ASMTAMFAGSDFI 206 (214)
Q Consensus 194 A~~ia~~aGaDFI 206 (214)
.+|+|.+
T Consensus 75 ------~~gvDg~ 81 (234)
T 2f6u_A 75 ------VYDVDYL 81 (234)
T ss_dssp ------CCCSSEE
T ss_pred ------hcCCCEE
Confidence 6688765
No 469
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=23.71 E-value=2.4e+02 Score=23.03 Aligned_cols=32 Identities=13% Similarity=0.118 Sum_probs=23.7
Q ss_pred EEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 176 MKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 176 lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
.++++..-.-...+...++++.+.++|||+|-
T Consensus 56 ~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vT 87 (246)
T 2yyu_A 56 HAVFLDLKLHDIPNTVKQAMKGLARVGADLVN 87 (246)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEE
T ss_pred CeEEEEeecccchHHHHHHHHHHHhcCCCEEE
Confidence 46777777664456666678888899999884
No 470
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=23.48 E-value=1.5e+02 Score=25.83 Aligned_cols=48 Identities=4% Similarity=-0.048 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 158 ELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 158 ~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
++..-++.|+..+.+ .++=+=+|+|+ ++.+++.+.++..+++|+.-||
T Consensus 66 em~~~~~~I~~~~~~-~PviaD~d~Gy-g~~~~v~~tv~~l~~aGaagv~ 113 (302)
T 3fa4_A 66 DMRANAEMISNISPS-TPVIADADTGY-GGPIMVARTTEQYSRSGVAAFH 113 (302)
T ss_dssp HHHHHHHHHHTTSTT-SCEEEECTTTT-SSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHhhccC-CCEEEECCCCC-CCHHHHHHHHHHHHHcCCcEEE
Confidence 333444444443323 56666666665 3566666666666677776665
No 471
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=23.30 E-value=1.3e+02 Score=25.60 Aligned_cols=74 Identities=14% Similarity=0.046 Sum_probs=44.8
Q ss_pred HHHHHHHHCCCCEEEEecChhH-hhcCCh-hHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 129 HEIELLAKQKVDEVDIVIQRSL-VLNNQW-PELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~-l~sg~~-~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
.+++.+.+.|+|-|-+. +... =..|.+ ..-.+-+.++++.. .+.||..-| +.+.+++.++- .+|||.|
T Consensus 129 ~~a~~~~~~GaD~i~v~-g~~~GG~~G~~~~~~~~~l~~v~~~~----~iPviaaGG-I~~~~~v~~al----~~GAdgV 198 (328)
T 2gjl_A 129 RHALKAERLGVDAVSID-GFECAGHPGEDDIPGLVLLPAAANRL----RVPIIASGG-FADGRGLVAAL----ALGADAI 198 (328)
T ss_dssp HHHHHHHHTTCSEEEEE-CTTCSBCCCSSCCCHHHHHHHHHTTC----CSCEEEESS-CCSHHHHHHHH----HHTCSEE
T ss_pred HHHHHHHHcCCCEEEEE-CCCCCcCCCCccccHHHHHHHHHHhc----CCCEEEECC-CCCHHHHHHHH----HcCCCEE
Confidence 57788999999988753 4321 011221 11224455555432 356777777 55778876553 3599999
Q ss_pred EcCCCC
Q psy965 207 KTSGSI 212 (214)
Q Consensus 207 KTSTGf 212 (214)
--+|+|
T Consensus 199 ~vGs~~ 204 (328)
T 2gjl_A 199 NMGTRF 204 (328)
T ss_dssp EESHHH
T ss_pred EECHHH
Confidence 888875
No 472
>3fk4_A Rubisco-like protein; structural genomics, target 9463A, PSI-2, protein structure initiative; 2.00A {Bacillus cereus atcc 14579}
Probab=23.15 E-value=59 Score=29.74 Aligned_cols=67 Identities=12% Similarity=0.128 Sum_probs=43.6
Q ss_pred CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC--CceEEEEEecc-CCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 139 VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE--KIHMKTILAVG-ELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 139 AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~--~~~lKvIlEt~-~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
..=.|+=++..+++. ++--.-=|.-+++.++. .-.+-.||==. =| +.++..+++.-+...|.||||-
T Consensus 106 lrL~Di~~P~~~~~~--f~GP~~Gi~g~R~~lg~~~RPl~gtiiKPklGl-s~~~~a~~~ye~~~GGlDfiKD 175 (414)
T 3fk4_A 106 VKLIDLTFSDELKKH--FPGPKFGIDGIRNLLQVHDRPLLMSIFKGMIGR-NIGYLKTQLRDQAIGGVDIVKD 175 (414)
T ss_dssp EEEEEEEECHHHHTT--CCCCSSHHHHHHHHHTCCSSCEEEEECSSCTTC-CHHHHHHHHHHHHHTTCSEEEC
T ss_pred eEEEEecCCHHHHhc--CCCCCCcHHHHHHHhCCCCCceeEeecccccCC-CHHHHHHHHHHHHhcCCCcCcC
Confidence 667898888887774 11111234445555532 12455555422 26 7899999999999999999994
No 473
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=23.14 E-value=75 Score=27.74 Aligned_cols=73 Identities=16% Similarity=0.094 Sum_probs=46.7
Q ss_pred HHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 128 LHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 128 ~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+..+.+ ++.||++|=+.=-.|.. ....+++-++.+++..+ +.|+...=+|...-..-+..|+++|+|.|-
T Consensus 147 l~~~~~-~~~G~~~i~l~Dt~G~~---~P~~~~~lv~~l~~~~~------~~i~~H~Hn~~G~a~an~laA~~aGa~~vd 216 (320)
T 3dxi_A 147 LSKLKA-IDKIADLFCMVDSFGGI---TPKEVKNLLKEVRKYTH------VPVGFHGHDNLQLGLINSITAIDDGIDFID 216 (320)
T ss_dssp GGGGGG-GTTTCSEEEEECTTSCC---CHHHHHHHHHHHHHHCC------SCEEEECBCTTSCHHHHHHHHHHTTCSEEE
T ss_pred HHHHHH-hhCCCCEEEECcccCCC---CHHHHHHHHHHHHHhCC------CeEEEEeCCCCccHHHHHHHHHHhCCCEEE
Confidence 333433 57899998776555543 56778888888887653 234444333333334456678899999998
Q ss_pred cCC
Q psy965 208 TSG 210 (214)
Q Consensus 208 TST 210 (214)
+|-
T Consensus 217 ~si 219 (320)
T 3dxi_A 217 ATI 219 (320)
T ss_dssp EBG
T ss_pred Eec
Confidence 874
No 474
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=23.01 E-value=1.7e+02 Score=23.58 Aligned_cols=71 Identities=13% Similarity=0.043 Sum_probs=41.5
Q ss_pred HHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcC
Q psy965 130 EIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 130 E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
-++.+.+.||++|-+. +...-..+.. ...+.++.+++.+ .+.+|+-.+ ..+.+++.++ .++|+|.|=-.
T Consensus 35 ~a~~~~~~Ga~~i~v~-d~~~~~~~~g-~~~~~i~~i~~~~----~iPvi~~gg-i~~~~~i~~~----~~~Gad~v~lg 103 (266)
T 2w6r_A 35 WVVEVEKRGAGEILLT-SIDRDGTKSG-YDTEMIRFVRPLT----TLPIIASGG-AGKMEHFLEA----FLAGADKALAA 103 (266)
T ss_dssp HHHHHHHHTCSEEEEE-ETTTSSCSSC-CCHHHHHHHGGGC----CSCEEEESC-CCSTHHHHHH----HHHTCSEEECC
T ss_pred HHHHHHHCCCCEEEEE-ecCcccCCCc-ccHHHHHHHHHhc----CCCEEEECC-CCCHHHHHHH----HHcCCcHhhhh
Confidence 4667778899999884 4432211111 1234445555432 356777655 6576766433 45799998776
Q ss_pred CC
Q psy965 210 GS 211 (214)
Q Consensus 210 TG 211 (214)
+.
T Consensus 104 ~~ 105 (266)
T 2w6r_A 104 SV 105 (266)
T ss_dssp CC
T ss_pred HH
Confidence 64
No 475
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=22.75 E-value=1.4e+02 Score=24.31 Aligned_cols=31 Identities=16% Similarity=0.115 Sum_probs=22.5
Q ss_pred HHHHCCCCEEEEecChhHhhcCChhHHHHHHHH
Q psy965 133 LLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQ 165 (214)
Q Consensus 133 ~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~ 165 (214)
++++.|||- +|+-++-+.+.|.....++++.
T Consensus 190 ~~~~aGad~--iVvGr~I~~a~dp~~a~~~~~~ 220 (228)
T 3m47_A 190 GETLRFADA--IIVGRSIYLADNPAAAAAGAIE 220 (228)
T ss_dssp -CGGGTCSE--EEECHHHHTSSCHHHHHHHHHH
T ss_pred hHHHcCCCE--EEECHHHhCCCCHHHHHHHHHH
Confidence 778899984 7888888888887666555544
No 476
>2epi_A UPF0045 protein MJ1052; NPPSFA, national project on protein structural and functiona analyses; 1.70A {Methanocaldococcus jannaschii} PDB: 2eky_A
Probab=22.62 E-value=44 Score=24.32 Aligned_cols=74 Identities=14% Similarity=0.100 Sum_probs=48.3
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHCCCCEEEEecCh-hHhhcCChhHHHHHHHHHHHHhcCC-----ceEEEEEeccCCCCH
Q psy965 116 GFPSGQ-YLLETRLHEIELLAKQKVDEVDIVIQR-SLVLNNQWPELFSEVKQMKEKCGEK-----IHMKTILAVGELKTS 188 (214)
Q Consensus 116 gFP~G~-~~~~~K~~E~~~Ai~~GAdEID~Vin~-~~l~sg~~~~v~~Ei~~v~~a~~~~-----~~lKvIlEt~~L~t~ 188 (214)
=+|.|. .+...=++++.+.++ ...+++.+|- |-...|+|+++.+=++++-+++..+ ..+|+=.=.+.-.+.
T Consensus 13 v~Plg~~~svs~~Va~~i~~l~--~sGl~y~~~pm~T~IEGe~devm~vv~~~~e~~~~g~~RV~~~iKid~R~d~~~~~ 90 (100)
T 2epi_A 13 IIPLGKGASVSKYVKKAIEVFK--KYDLKVETNAMGTVLEGDLDEILKAFKEAHSTVLNDVDRVVSSLKIDERKDKENTI 90 (100)
T ss_dssp EEEECBSSCCHHHHHHHHHHHT--TSSCEEEEETTEEEEEEEHHHHHHHHHHHHHHHHTTSSEEEEEEEEEEESSSCCCH
T ss_pred EEeCCCCCCHHHHHHHHHHHHH--HcCCCeEecCCccEEEcCHHHHHHHHHHHHHHHHcCCCEEEEEEEEEecCCCCCCH
Confidence 368773 245555677777886 3567777666 7788999999999999998887542 245544444322244
Q ss_pred HHH
Q psy965 189 ENI 191 (214)
Q Consensus 189 e~i 191 (214)
+++
T Consensus 91 ~~K 93 (100)
T 2epi_A 91 ERK 93 (100)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 477
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=22.44 E-value=2.2e+02 Score=25.87 Aligned_cols=75 Identities=12% Similarity=0.145 Sum_probs=45.3
Q ss_pred HHHHHHHHCCCCEEEEecChhHh-----hc--CC-hhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHH
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLV-----LN--NQ-WPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMF 200 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l-----~s--g~-~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~ 200 (214)
.+++.+.+.|||-|++-.-.|.. .. |. ......++.++++.. .+.||-.-| ..+.+++.+| +.
T Consensus 308 ~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~----~ipVia~GG-I~~~~di~ka----la 378 (514)
T 1jcn_A 308 AQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRF----GVPIIADGG-IQTVGHVVKA----LA 378 (514)
T ss_dssp HHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG----TCCEEEESC-CCSHHHHHHH----HH
T ss_pred HHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhC----CCCEEEECC-CCCHHHHHHH----HH
Confidence 46889999999999984322211 11 11 122335555555432 245665555 6577777654 34
Q ss_pred cCCCEEEcCCCC
Q psy965 201 AGSDFIKTSGSI 212 (214)
Q Consensus 201 aGaDFIKTSTGf 212 (214)
+|||+|--++.|
T Consensus 379 ~GAd~V~iG~~~ 390 (514)
T 1jcn_A 379 LGASTVMMGSLL 390 (514)
T ss_dssp TTCSEEEESTTT
T ss_pred cCCCeeeECHHH
Confidence 799999888765
No 478
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=22.38 E-value=96 Score=27.47 Aligned_cols=80 Identities=9% Similarity=0.147 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHCCCCEEEEecChhH---------------hhcCC--hhHHHHHHHHHHHHhcCCceEEEEEeccCCCC
Q psy965 125 ETRLHEIELLAKQKVDEVDIVIQRSL---------------VLNNQ--WPELFSEVKQMKEKCGEKIHMKTILAVGELKT 187 (214)
Q Consensus 125 ~~K~~E~~~Ai~~GAdEID~Vin~~~---------------l~sg~--~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t 187 (214)
+.-..-++.+.+.|||-|-+ .|... -+||. +..-.+-++++++++++ .+.||.--| ..+
T Consensus 234 ~~~~~ia~~~~~aGadgi~v-~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~--~ipvI~~GG-I~s 309 (367)
T 3zwt_A 234 QDKEDIASVVKELGIDGLIV-TNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG--RVPIIGVGG-VSS 309 (367)
T ss_dssp HHHHHHHHHHHHHTCCEEEE-CCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT--CSCEEEESS-CCS
T ss_pred HHHHHHHHHHHHcCCCEEEE-eCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC--CceEEEECC-CCC
Confidence 34445566777899999864 45531 12332 23345778888888764 355665555 657
Q ss_pred HHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 188 SENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 188 ~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+.+.++ +++|||.|-.+||+
T Consensus 310 ~~da~~~----l~~GAd~V~vgra~ 330 (367)
T 3zwt_A 310 GQDALEK----IRAGASLVQLYTAL 330 (367)
T ss_dssp HHHHHHH----HHHTCSEEEESHHH
T ss_pred HHHHHHH----HHcCCCEEEECHHH
Confidence 7766543 34799999988875
No 479
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=22.20 E-value=3.5e+02 Score=22.72 Aligned_cols=92 Identities=13% Similarity=0.046 Sum_probs=62.3
Q ss_pred CCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEe----
Q psy965 106 VYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILA---- 181 (214)
Q Consensus 106 s~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlE---- 181 (214)
..++|.+- .|...+..-+..++.|.+.|||-+=++.++ +.+ ..-+.+++-.++|.++++- -+||=
T Consensus 75 grvpviaG-----vg~~~t~~ai~la~~a~~~Gadavlv~~P~-y~~-~~~~~l~~~f~~va~a~~l----PiilYn~P~ 143 (297)
T 3flu_A 75 KRVPVIAG-----TGANNTVEAIALSQAAEKAGADYTLSVVPY-YNK-PSQEGIYQHFKTIAEATSI----PMIIYNVPG 143 (297)
T ss_dssp TSSCEEEE-----CCCSSHHHHHHHHHHHHHTTCSEEEEECCC-SSC-CCHHHHHHHHHHHHHHCCS----CEEEEECHH
T ss_pred CCCcEEEe-----CCCcCHHHHHHHHHHHHHcCCCEEEECCCC-CCC-CCHHHHHHHHHHHHHhCCC----CEEEEECCc
Confidence 35665544 267788888999999999999999777654 334 3557888899999988742 23332
Q ss_pred -ccCCCCHHHHHHHHHHHHHcCCCEEEcCCC
Q psy965 182 -VGELKTSENIYCASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 182 -t~~L~t~e~i~~A~~ia~~aGaDFIKTSTG 211 (214)
||.--+.+.+.+. +..-..-.||=|+|
T Consensus 144 ~tg~~l~~~~~~~L---a~~pnivgiKdssg 171 (297)
T 3flu_A 144 RTVVSMTNDTILRL---AEIPNIVGVKEASG 171 (297)
T ss_dssp HHSSCCCHHHHHHH---TTSTTEEEEEECSC
T ss_pred hhccCCCHHHHHHH---HcCCCEEEEEeCCC
Confidence 4433366666544 33456778888776
No 480
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=21.76 E-value=1.6e+02 Score=24.61 Aligned_cols=71 Identities=13% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHH---HHhcCCceEEEEE---eccCCCCHHHHHHHHH---HHHHc
Q psy965 131 IELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMK---EKCGEKIHMKTIL---AVGELKTSENIYCASM---TAMFA 201 (214)
Q Consensus 131 ~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~---~a~~~~~~lKvIl---Et~~L~t~e~i~~A~~---ia~~a 201 (214)
+..|.+.|||-|+..-|+ ..|=...=+-.|+.++ +.+. .++-|+| .-+..-+++|+....+ .+.++
T Consensus 14 a~~A~~~GAdRIELc~~L---~~GGlTPS~g~i~~~~~~~~~~~--ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~ 88 (224)
T 2bdq_A 14 LTRLDKAIISRVELCDNL---AVGGTTPSYGVIKEANQYLHEKG--ISVAVMIRPRGGNFVYNDLELRIMEEDILRAVEL 88 (224)
T ss_dssp GGGCCTTTCCEEEEEBCG---GGTCBCCCHHHHHHHHHHHHHTT--CEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEcCCc---ccCCcCCCHHHHHHHHHhhhhcC--CceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHc
Q ss_pred CCCEE
Q psy965 202 GSDFI 206 (214)
Q Consensus 202 GaDFI 206 (214)
|+|-|
T Consensus 89 GadGv 93 (224)
T 2bdq_A 89 ESDAL 93 (224)
T ss_dssp TCSEE
T ss_pred CCCEE
No 481
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=21.70 E-value=1.8e+02 Score=23.07 Aligned_cols=74 Identities=9% Similarity=-0.085 Sum_probs=42.2
Q ss_pred ccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhc
Q psy965 92 STVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG 171 (214)
Q Consensus 92 ~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~ 171 (214)
..+...++.++ ..++++.++ +.+.. ...+.=...++.|-+.|+.-|=+-. + . +.++.+.+.+.
T Consensus 61 ~~~~~~~~~l~--~~gl~i~~~--~~~~~-~~~~~~~~~i~~A~~lGa~~v~~~p--~-------~---~~l~~l~~~a~ 123 (257)
T 3lmz_A 61 EQIRAFHDKCA--AHKVTGYAV--GPIYM-KSEEEIDRAFDYAKRVGVKLIVGVP--N-------Y---ELLPYVDKKVK 123 (257)
T ss_dssp HHHHHHHHHHH--HTTCEEEEE--EEEEE-CSHHHHHHHHHHHHHHTCSEEEEEE--C-------G---GGHHHHHHHHH
T ss_pred HHHHHHHHHHH--HcCCeEEEE--ecccc-CCHHHHHHHHHHHHHhCCCEEEecC--C-------H---HHHHHHHHHHH
Confidence 34556667776 467777766 22222 3444445567788888998764432 2 1 22333344443
Q ss_pred CCceEEEEEecc
Q psy965 172 EKIHMKTILAVG 183 (214)
Q Consensus 172 ~~~~lKvIlEt~ 183 (214)
. .-+++-+|+-
T Consensus 124 ~-~gv~l~lEn~ 134 (257)
T 3lmz_A 124 E-YDFHYAIHLH 134 (257)
T ss_dssp H-HTCEEEEECC
T ss_pred H-cCCEEEEecC
Confidence 3 3478889987
No 482
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=21.63 E-value=1.6e+02 Score=27.29 Aligned_cols=125 Identities=7% Similarity=-0.045 Sum_probs=70.8
Q ss_pred CCCCCHHHHHHHHHHhhccCchhhhccccccCcccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCC
Q psy965 59 SGDDTEAVVETLTLKAIQPLSEELKEKVLRGFVSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQK 138 (214)
Q Consensus 59 ~~~~T~~~I~~lc~eA~~~f~~~~~~~~~cv~P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~G 138 (214)
.++.|.++++++-+-.. ..+++|.....+.+.|++ ..++|... .++|.|...+..=+.++.+.. |
T Consensus 273 ~ggtt~~ei~~~~~A~~----------niv~~~~~~~~~A~~Le~-~~GiP~i~--~~~PiG~~~T~~~l~~la~~~--g 337 (523)
T 3u7q_B 273 AGGTTQEEMKDAPNALN----------TVLLQPWHLEKTKKFVEG-TWKHEVPK--LNIPMGLDWTDEFLMKVSEIS--G 337 (523)
T ss_dssp CCCBCHHHHHHGGGSSE----------EEESSGGGCHHHHHHHHH-TSCCCCCC--CCCSCHHHHHHHHHHHHHHHH--C
T ss_pred CCCCCHHHHHHhhcCcE----------EEEEccchHHHHHHHHHH-HhCCCeee--cCCcCCHHHHHHHHHHHHHHH--C
Confidence 47779999988743222 235577766677788875 35666443 389999998888877777665 3
Q ss_pred CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCCCC
Q psy965 139 VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKTSGSI 212 (214)
Q Consensus 139 AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTSTGf 212 (214)
.+ + . ......-..+.+.+...+...++ -||.|-. +.....-.++...+.|..=+-..|++
T Consensus 338 ~~-~----~--~~i~~er~r~~~~l~d~~~~l~G---KrvaI~g----d~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 338 QP-I----P--ASLTKERGRLVDMMTDSHTWLHG---KRFALWG----DPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp CC-C----C--HHHHHHHHHHHHHHHHHHHHHTT---CEEEEEC----SHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CC-h----h--HHHHHHHHHHHHHHHHHHHhcCC---CEEEEEC----CchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 32 1 1 11111111222222222222233 3555542 33445556666678888877776654
No 483
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=21.58 E-value=67 Score=29.67 Aligned_cols=66 Identities=14% Similarity=0.223 Sum_probs=42.8
Q ss_pred CCEEEEecChhHhhcCChhHHHHHHHHHHHHhc--CCceEEEEEe--ccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 139 VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCG--EKIHMKTILA--VGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 139 AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~--~~~~lKvIlE--t~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
..=.|+=++..+++.-+-- .-=|.-+++..+ +.-.+-.||= .| | +.++..+++.-+...|.||||-
T Consensus 121 lrL~Di~~P~~~~~~F~GP--~~GI~g~R~~lgv~~RPllgtiiKPklG-L-s~~~~a~~~ye~~~GGlDfiKD 190 (444)
T 3kdn_A 121 LRLEDLYFPEKLIREFDGP--AFGIEGVRKMLEIKDRPIYGVVPKPKVG-Y-SPEEFEKLAYDLLSNGADYMKD 190 (444)
T ss_dssp EEEEEEECCHHHHTTCCCC--SSHHHHHHHHHTCCSSCEEEECCSSSSC-C-CHHHHHHHHHHHHHTTCCEEEC
T ss_pred eEEEEEeCCHHHHhcCCCC--CCCHHHHHHHhCCCCCceEEeecCcccC-C-CHHHHHHHHHHHHhcCCceeec
Confidence 5678898988887642211 122344444443 2123455554 34 5 7899999999999999999994
No 484
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=21.57 E-value=1.2e+02 Score=29.75 Aligned_cols=90 Identities=10% Similarity=0.086 Sum_probs=59.8
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEec---ChhHhhc-----C---ChhHHHH--HHHHHHHHhcCCceEEEEEe
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVI---QRSLVLN-----N---QWPELFS--EVKQMKEKCGEKIHMKTILA 181 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vi---n~~~l~s-----g---~~~~v~~--Ei~~v~~a~~~~~~lKvIlE 181 (214)
.+|.+|..+ +.-..=+..|.++|-+- +.+ |-|+-.. + ++-..+. +|.++++=++. +-+++|+=
T Consensus 362 ~~~~~g~nt-e~~K~YIDFAA~~G~ey--vLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~s-KGV~iilw 437 (738)
T 2d73_A 362 PNGKHSANT-ANVKRYIDFAAAHGFDA--VLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAAR-KGIKMMMH 437 (738)
T ss_dssp BCSCBCCCH-HHHHHHHHHHHHTTCSE--EEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHH-TTCEEEEE
T ss_pred cCCccCCCH-HHHHHHHHHHHHcCCCE--EEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHh-CCCEEEEE
Confidence 478888754 44445899999999887 566 8887421 1 1111111 36677765554 56888875
Q ss_pred ccCCC----CHHHHHHHHHHHHHcCCCEEEc
Q psy965 182 VGELK----TSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 182 t~~L~----t~e~i~~A~~ia~~aGaDFIKT 208 (214)
..--. -.++..++.....+-|++-||+
T Consensus 438 ~~t~~~~~n~e~~~d~~f~~~~~~Gv~GVKv 468 (738)
T 2d73_A 438 HETSASVRNYERHMDKAYQFMADNGYNSVKS 468 (738)
T ss_dssp EECTTBHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred EcCCCchhhHHHHHHHHHHHHHHcCCCEEEe
Confidence 54442 2455778999999999999996
No 485
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=21.26 E-value=1.1e+02 Score=26.20 Aligned_cols=61 Identities=18% Similarity=0.277 Sum_probs=40.8
Q ss_pred HHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEE
Q psy965 129 HEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFI 206 (214)
Q Consensus 129 ~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFI 206 (214)
.++.+|...|||-|=... ++++ .++++.+.+.+.. .-|-+++|+- +.+|+.+|. ++|++.|
T Consensus 117 yQI~eAr~~GADaILLI~---a~L~------~~~l~~l~~~A~~-lGl~~LvEVh---~~~El~rAl----~~~a~iI 177 (258)
T 4a29_A 117 SQIDDAYNLGADTVLLIV---KILT------ERELESLLEYARS-YGMEPLILIN---DENDLDIAL----RIGARFI 177 (258)
T ss_dssp HHHHHHHHHTCSEEEEEG---GGSC------HHHHHHHHHHHHH-TTCCCEEEES---SHHHHHHHH----HTTCSEE
T ss_pred HHHHHHHHcCCCeeehHH---hhcC------HHHHHHHHHHHHH-HhHHHHHhcc---hHHHHHHHh----cCCCcEE
Confidence 577888889999864433 2232 2355566666654 4578899997 668876654 5699887
No 486
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=21.15 E-value=3.9e+02 Score=22.89 Aligned_cols=93 Identities=13% Similarity=0.098 Sum_probs=63.6
Q ss_pred CCeEEEecCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 108 QPCLSQPAGFPSG-QYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 108 v~vatV~igFP~G-~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
+++-+. .+|... ....+..+.+++.+.+.|.+-+=+=+- .+.+.-.+-+++++++.++ -+++.++...=-
T Consensus 129 ~~~y~~-~~~~~~~~~~~~~~~~~~~~~~~~Gf~~~K~k~g------~~~~~di~~v~avr~~~g~--~~~l~vDaN~~~ 199 (378)
T 4hpn_A 129 VRAYAT-GSFKRDNVDRVSDNASEMAERRAEGFHACKIKIG------FGVEEDLRVIAAVREAIGP--DMRLMIDANHGY 199 (378)
T ss_dssp EEEEEE-CCCBCTTCCHHHHHHHHHHHHHHTTCSEEEEECC------SCHHHHHHHHHHHHHHHTT--TSEEEEECTTCC
T ss_pred cceeee-eccccccchhHHHHHHHHHHHHHhccceeccccc------CChHHHHHHHHHHHHhcCC--cEEEEEecCccc
Confidence 455555 455443 344677788899999999987655442 2445555667888888875 367888865544
Q ss_pred CHHHHHHHHHHHHHcCCCEEEcC
Q psy965 187 TSENIYCASMTAMFAGSDFIKTS 209 (214)
Q Consensus 187 t~e~i~~A~~ia~~aGaDFIKTS 209 (214)
+.++-.+.++...+.|..||--.
T Consensus 200 ~~~~A~~~~~~l~~~~i~~iEeP 222 (378)
T 4hpn_A 200 TVTEAITLGDRAAGFGIDWFEEP 222 (378)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECC
T ss_pred CHHHHHHHHhhhhhcccchhhcC
Confidence 77777777777778899888643
No 487
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=21.01 E-value=4e+02 Score=22.89 Aligned_cols=92 Identities=14% Similarity=0.191 Sum_probs=60.4
Q ss_pred CCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCC
Q psy965 107 YQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELK 186 (214)
Q Consensus 107 ~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~ 186 (214)
.+++... +|+ +....+.-..+++.+++.|.+-+=+=+ | ++.+.-.+=+++++++.++ -+++.+....--
T Consensus 131 ~vp~~~~-~g~--~~~~~~~~~~~a~~~~~~G~~~~KiKv--G----~~~~~d~~~v~avr~a~g~--~~~l~vDaN~~~ 199 (372)
T 3cyj_A 131 EVPVYGS-GGF--TSYPLRRLQEQLGGWAAAGIPRVKMKV--G----REPEKDPERVRAAREAIGE--SVELMVDANGAY 199 (372)
T ss_dssp SEEEEEE-CCC--TTSCHHHHHHHHHHHHHTTCCEEEEEC--C----SSGGGHHHHHHHHHHHHCT--TSEEEEECTTCS
T ss_pred CceEEEE-cCC--CCCCHHHHHHHHHHHHHcCCCEEEEcC--C----CCHHHHHHHHHHHHHHhCC--CCeEEEECCCCC
Confidence 4555444 343 222345567889999999988877532 2 1455556678888888875 367788865444
Q ss_pred CHHHHHHHHHHHHHc-CCCEEEcC
Q psy965 187 TSENIYCASMTAMFA-GSDFIKTS 209 (214)
Q Consensus 187 t~e~i~~A~~ia~~a-GaDFIKTS 209 (214)
+.++..+..+...+. +..||-=.
T Consensus 200 ~~~~a~~~~~~l~~~~~i~~iEqP 223 (372)
T 3cyj_A 200 TRKQALYWAGAFAREAGISYLEEP 223 (372)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEECS
T ss_pred CHHHHHHHHHHHHhhcCCcEEECC
Confidence 767766666666777 99998643
No 488
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=20.96 E-value=38 Score=26.98 Aligned_cols=76 Identities=11% Similarity=0.127 Sum_probs=43.3
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHCCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHH
Q psy965 115 AGFPSGQYLLETRLHEIELLAKQKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCA 194 (214)
Q Consensus 115 igFP~G~~~~~~K~~E~~~Ai~~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A 194 (214)
+.||.|......-+ .+++.==..||+.+ +..+. +.+. .++.+++..+..+++|++-...... ...
T Consensus 39 ~~~~~~~~~~~~ll----~~I~~A~~sI~i~~---y~~~~--~~i~---~aL~~aa~rGV~Vrii~D~~~~~~~---~~~ 103 (196)
T 4ggj_A 39 CSLPHSESSLSRLL----RALLAARSSLELCL---FAFSS--PQLG---RAVQLLHQRGVRVRVITDCDYMALN---GSQ 103 (196)
T ss_dssp CSSCCSCCHHHHHH----HHHHTCSSEEEEEE---SCBCC--HHHH---HHHHHHHHTTCEEEEEESSCCC------CCH
T ss_pred eecCCcHHHHHHHH----HHHHHhheEEEEEE---EEeCC--HHHH---HHHHHHHHcCCcEEEEEeccccccc---HHH
Confidence 68999987765544 34443336899986 22322 3444 3455666545899999976544211 112
Q ss_pred HHHHHHcCCCE
Q psy965 195 SMTAMFAGSDF 205 (214)
Q Consensus 195 ~~ia~~aGaDF 205 (214)
......+|+..
T Consensus 104 ~~~l~~~gi~v 114 (196)
T 4ggj_A 104 IGLLRKAGIQV 114 (196)
T ss_dssp HHHHHHTTCEE
T ss_pred HHHHHhcCCCc
Confidence 23455678764
No 489
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=20.81 E-value=2.5e+02 Score=22.85 Aligned_cols=80 Identities=14% Similarity=0.047 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhc-cCchhhhccccccC--cccHHHHHHhhhcCCCCCCeEEEecCCCCCCCCHHHHHHHHHHHHHCCCCE
Q psy965 65 AVVETLTLKAIQ-PLSEELKEKVLRGF--VSTVWHGSDNLKTKLVYQPCLSQPAGFPSGQYLLETRLHEIELLAKQKVDE 141 (214)
Q Consensus 65 ~~I~~lc~eA~~-~f~~~~~~~~~cv~--P~~V~~a~~~L~~~gs~v~vatV~igFP~G~~~~~~K~~E~~~Ai~~GAdE 141 (214)
+.+.++.+.|.+ .. .+.+|.. |..++..++.+. . ..+.+--|+ |.|.+ .++|++.|+|-
T Consensus 115 ~~v~~~a~~a~~~G~-----~GvV~sat~~~e~~~ir~~~~---~-f~~v~pGI~-~~g~~--------~~~a~~~Gad~ 176 (215)
T 3ve9_A 115 AFYPYLREVARRVNP-----KGFVAPATRPSMISRVKGDFP---D-KLVISPGVG-TQGAK--------PGIALCHGADY 176 (215)
T ss_dssp GGHHHHHHHHHHHCC-----SEEECCTTSHHHHHHHHHHCT---T-SEEEECCTT-STTCC--------TTHHHHTTCSE
T ss_pred HHHHHHHHHHHHcCC-----CceeeCCCCHHHHHHHHHhCC---C-cEEEcCCCC-cCcCC--------HHHHHHcCCCE
Confidence 335556555553 11 1234543 666776666543 3 333222244 45543 55788899995
Q ss_pred EEEecChhHhhcCChhHHHHHHH
Q psy965 142 VDIVIQRSLVLNNQWPELFSEVK 164 (214)
Q Consensus 142 ID~Vin~~~l~sg~~~~v~~Ei~ 164 (214)
+|+-++-+.+.|.....++++
T Consensus 177 --iVvGr~I~~a~dp~~a~~~i~ 197 (215)
T 3ve9_A 177 --EIVGRSVYQSADPVRKLEEIV 197 (215)
T ss_dssp --EEECHHHHTSSSHHHHHHHHH
T ss_pred --EEeCHHHcCCCCHHHHHHHHH
Confidence 778888888888765554443
No 490
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=20.62 E-value=80 Score=25.80 Aligned_cols=28 Identities=29% Similarity=0.374 Sum_probs=22.1
Q ss_pred EEEeccCCCCHHHHHHHHHHHHHcCCCEEEcCC
Q psy965 178 TILAVGELKTSENIYCASMTAMFAGSDFIKTSG 210 (214)
Q Consensus 178 vIlEt~~L~t~e~i~~A~~ia~~aGaDFIKTST 210 (214)
-|+--|...|.|++. - ..||||.|-|||
T Consensus 151 PiIaGGlI~t~edv~----~-l~aGA~aIsTs~ 178 (188)
T 1vkf_A 151 TVIAAGLVETEEEAR----E-ILKHVSAISTSS 178 (188)
T ss_dssp EEEEESCCCSHHHHH----H-HTTTSSEEEECC
T ss_pred CEEEECCcCCHHHHH----H-HHCCCeEEEeCC
Confidence 457778887866664 3 789999999998
No 491
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=20.54 E-value=66 Score=29.60 Aligned_cols=66 Identities=21% Similarity=0.190 Sum_probs=42.9
Q ss_pred CCEEEEecChhHhhcCChhHHHHHHHHHHHHhcC-C-ceEEEEEe--ccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 139 VDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGE-K-IHMKTILA--VGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 139 AdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~-~-~~lKvIlE--t~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
..=.|+=++..+++. ++--.--|.-+++.++- + -.+-.||= .| | +.++..+++.-+...|.||||-
T Consensus 127 lrL~D~~~P~~~~~~--f~GP~~GI~g~R~~lg~~~RPl~gtiiKPklG-L-s~~~~a~~~ye~~~GGlDfiKD 196 (432)
T 3nwr_A 127 VRLLSLRLPASYRAR--FELPRHGVAGTRALTDVKDRPMIGTIIKPNVG-L-SAAETAALVRELCEAGVDFIKD 196 (432)
T ss_dssp EEEEEEECCHHHHTT--SBCCSSHHHHHHHHHTCCSSCEEEEECSSSSC-C-CHHHHHHHHHHHHHHTCSEEEC
T ss_pred eEEEeecCCHHHHhc--CCCCCCCHHHHHHHhCCCCCceEEEeeccccC-C-CHHHHHHHHHHHHhcCCceeEC
Confidence 466888888887763 11111224444454432 1 24556664 34 6 7899999999999999999994
No 492
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=20.39 E-value=2.2e+02 Score=22.57 Aligned_cols=21 Identities=5% Similarity=0.146 Sum_probs=11.5
Q ss_pred HHHHHHHHHh---cCCceEEEEEecc
Q psy965 161 SEVKQMKEKC---GEKIHMKTILAVG 183 (214)
Q Consensus 161 ~Ei~~v~~a~---~~~~~lKvIlEt~ 183 (214)
+++..+.+.+ +. ++++.+.++
T Consensus 142 ~~~~~ll~~v~~~~~--~vg~~~D~g 165 (264)
T 1yx1_A 142 EVLERFFRLAERQQL--DLAMTFDIG 165 (264)
T ss_dssp HHHHHHHHHHHHTTC--SEEEEEETT
T ss_pred HHHHHHHHHHHhcCC--CeEEEEehh
Confidence 4455555554 33 277777774
No 493
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=20.39 E-value=2.4e+02 Score=23.15 Aligned_cols=76 Identities=7% Similarity=-0.057 Sum_probs=44.0
Q ss_pred HHHHHCCCCEEEEecChhHhhcCCh--hHHHHHHHHHHHHhcCCceEEEEE-ecc-------CCCC-H--------HHHH
Q psy965 132 ELLAKQKVDEVDIVIQRSLVLNNQW--PELFSEVKQMKEKCGEKIHMKTIL-AVG-------ELKT-S--------ENIY 192 (214)
Q Consensus 132 ~~Ai~~GAdEID~Vin~~~l~sg~~--~~v~~Ei~~v~~a~~~~~~lKvIl-Et~-------~L~t-~--------e~i~ 192 (214)
+.|.+.|.+-|++..... ...| ....++++++++++.. .-|++.- -++ -|.+ + +.+.
T Consensus 42 ~~a~~~G~~~vEl~~~~~---~~~~~~~~~~~~~~~~~~~l~~-~Gl~i~~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~ 117 (316)
T 3qxb_A 42 LVRDDLGLEYVQYTYDLT---DPWWPDIERDRRAIAYAKAFRK-AGLTIESTFGGLASYTYNHFLAPTLELQSLGYQHLK 117 (316)
T ss_dssp HHHHTSCCCEEEEETTTS---CTTSCHHHHHHHHHHHHHHHHH-TTCEEEEEECCHHHHTSCBTTCSSHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEeecccc---CccccccchhhHHHHHHHHHHH-cCCeEEEeeccccccccccCCCCCHHHHHHHHHHHH
Confidence 455689999999987532 1112 2223356666666543 2344431 111 1222 2 2356
Q ss_pred HHHHHHHHcCCCEEEcCCC
Q psy965 193 CASMTAMFAGSDFIKTSGS 211 (214)
Q Consensus 193 ~A~~ia~~aGaDFIKTSTG 211 (214)
++.++|...|+.+|-+..|
T Consensus 118 ~~i~~A~~lGa~~v~~~~g 136 (316)
T 3qxb_A 118 RAIDMTAAMEVPATGMPFG 136 (316)
T ss_dssp HHHHHHHHTTCCEEEECCB
T ss_pred HHHHHHHHcCCCEEEecCC
Confidence 7888999999999986554
No 494
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=20.33 E-value=2.1e+02 Score=23.03 Aligned_cols=71 Identities=15% Similarity=0.139 Sum_probs=41.6
Q ss_pred HHHHHHHCCCCEEEEe-cChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEEc
Q psy965 130 EIELLAKQKVDEVDIV-IQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIKT 208 (214)
Q Consensus 130 E~~~Ai~~GAdEID~V-in~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIKT 208 (214)
.++.+.+.|+++|=+- +++.....|- + .+-++.+++.+ .+.||.+-| ..+.+++.++. ++|+|.+=-
T Consensus 161 ~~~~~~~~G~~~i~~t~~~~~g~~~g~-~--~~~i~~l~~~~----~ipvia~GG-I~~~ed~~~~~----~~Gadgv~v 228 (266)
T 2w6r_A 161 WVVEVEKRGAGEILLTSIDRDGTKSGY-D--TEMIRFVRPLT----TLPIIASGG-AGKMEHFLEAF----LAGADAALA 228 (266)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTTCSCC-C--HHHHHHHGGGC----CSCEEEESC-CCSHHHHHHHH----HHTCSEEEE
T ss_pred HHHHHHHcCCCEEEEEeecCCCCcCCC-C--HHHHHHHHHHc----CCCEEEeCC-CCCHHHHHHHH----HcCCHHHHc
Confidence 3577778999997432 2222222231 1 23334444332 356788877 54778776543 479999887
Q ss_pred CCCC
Q psy965 209 SGSI 212 (214)
Q Consensus 209 STGf 212 (214)
.+++
T Consensus 229 gsal 232 (266)
T 2w6r_A 229 ASVF 232 (266)
T ss_dssp STTT
T ss_pred cHHH
Confidence 7765
No 495
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=20.17 E-value=1.3e+02 Score=26.27 Aligned_cols=39 Identities=5% Similarity=0.158 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHcCCCEEE
Q psy965 159 LFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFAGSDFIK 207 (214)
Q Consensus 159 v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~aGaDFIK 207 (214)
+.+-++++++.++. +|+.+|+.-| +|... |+++|+|.|-
T Consensus 194 i~~Av~~ar~~~p~---~kIeVEv~tl---~e~~e----Al~aGaDiIm 232 (300)
T 3l0g_A 194 ITLAIQRLRKNLKN---EYIAIECDNI---SQVEE----SLSNNVDMIL 232 (300)
T ss_dssp HHHHHHHHHHHSSS---CCEEEEESSH---HHHHH----HHHTTCSEEE
T ss_pred HHHHHHHHHHhCCC---CCEEEEECCH---HHHHH----HHHcCCCEEE
Confidence 44556667766553 6899999854 66654 4568999884
No 496
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=20.07 E-value=4.3e+02 Score=22.89 Aligned_cols=80 Identities=13% Similarity=0.086 Sum_probs=54.1
Q ss_pred CHHHHHHHHHHHHH-CCCCEEEEecChhHhhcCChhHHHHHHHHHHHHhcCCceEEEEEeccCCCCHHHHHHHHHHHHHc
Q psy965 123 LLETRLHEIELLAK-QKVDEVDIVIQRSLVLNNQWPELFSEVKQMKEKCGEKIHMKTILAVGELKTSENIYCASMTAMFA 201 (214)
Q Consensus 123 ~~~~K~~E~~~Ai~-~GAdEID~Vin~~~l~sg~~~~v~~Ei~~v~~a~~~~~~lKvIlEt~~L~t~e~i~~A~~ia~~a 201 (214)
..+.-+.+++.+++ .|.+-+-+=+.. .+.+.-.+=+++++++.++ -+.+.+....--+.++-.+.++...+.
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~-----~~~~~d~~~v~avR~a~g~--~~~l~vDaN~~~~~~~A~~~~~~l~~~ 219 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGA-----RELATDLRHTRAIVEALGD--RASIRVDVNQAWDAATGAKGCRELAAM 219 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCS-----SCHHHHHHHHHHHHHHTCT--TCEEEEECTTCBCHHHHHHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCC-----CChHHHHHHHHHHHHHcCC--CCeEEEECCCCCCHHHHHHHHHHHhhc
Confidence 56666778888887 588887764421 2345556667888888875 357778765544777777778888888
Q ss_pred CCCEEEcC
Q psy965 202 GSDFIKTS 209 (214)
Q Consensus 202 GaDFIKTS 209 (214)
|..||--.
T Consensus 220 ~i~~iEeP 227 (381)
T 3fcp_A 220 GVDLIEQP 227 (381)
T ss_dssp TCSEEECC
T ss_pred CccceeCC
Confidence 99998644
Done!