Query psy9651
Match_columns 414
No_of_seqs 109 out of 804
Neff 2.5
Searched_HMMs 29240
Date Sat Aug 17 01:09:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9651.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9651hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3epy_A Acyl-COA-binding domain 100.0 1.6E-32 5.3E-37 222.6 11.0 87 328-414 2-88 (89)
2 1st7_A ACBP, acyl-COA-binding 100.0 5.3E-32 1.8E-36 217.2 10.1 85 330-414 1-85 (86)
3 1hbk_A ACBP, acyl-COA binding 100.0 1.2E-31 4.1E-36 216.3 11.2 85 330-414 2-88 (89)
4 2cb8_A Acyl-COA-binding protei 100.0 3.9E-31 1.3E-35 213.1 11.3 84 331-414 3-86 (87)
5 2cop_A Acyl-coenzyme A binding 100.0 1.4E-30 4.9E-35 217.9 11.0 88 327-414 5-92 (109)
6 2cqu_A Peroxisomal D3,D2-enoyl 100.0 2.6E-30 8.8E-35 219.2 11.1 92 323-414 9-100 (116)
7 3fp5_A Acyl-COA binding protei 100.0 5.2E-30 1.8E-34 214.3 11.6 87 328-414 2-92 (106)
8 3flv_A Acyl-COA-binding domain 100.0 3.2E-30 1.1E-34 220.1 9.8 98 317-414 11-112 (119)
9 2lbb_A Acyl COA binding protei 100.0 2.3E-30 7.9E-35 213.5 7.4 84 331-414 11-95 (96)
10 2wh5_A Acyl-COA-binding domain 100.0 2.4E-29 8.1E-34 210.1 10.3 85 329-413 7-95 (106)
11 1mix_A Talin; focal adhesion, 98.5 3.6E-07 1.2E-11 78.4 9.9 84 330-414 18-115 (206)
12 4f7g_A Talin-1; alpha-helix bu 96.7 0.007 2.4E-07 53.3 9.3 87 327-414 26-126 (222)
13 1ef1_A Moesin; membrane, FERM 96.6 0.0077 2.6E-07 54.5 8.9 82 332-414 98-199 (294)
14 3qij_A Protein 4.1; cytoskelet 96.5 0.0051 1.8E-07 56.9 7.4 80 334-414 114-205 (296)
15 1h4r_A Merlin; FERM, neurofibr 96.4 0.01 3.6E-07 54.4 8.9 81 333-414 119-219 (314)
16 3ivf_A Talin-1; FERM domain, c 95.9 0.037 1.3E-06 52.2 9.9 81 333-414 186-280 (371)
17 3au4_A Myosin-X; protein-prote 94.9 0.074 2.5E-06 52.9 8.7 83 331-414 322-451 (555)
18 2i1j_A Moesin; FERM, coiled-co 94.9 0.072 2.5E-06 54.5 8.6 81 333-414 102-202 (575)
19 2al6_A Focal adhesion kinase 1 92.7 0.24 8.2E-06 47.3 7.2 81 333-414 117-224 (375)
20 4dxa_B KREV interaction trappe 92.5 0.17 5.9E-06 47.0 5.9 82 332-414 116-222 (322)
21 4eku_A Protein-tyrosine kinase 91.8 0.3 1E-05 47.7 7.0 83 331-414 135-244 (392)
22 3pvl_A Myosin VIIA isoform 1; 86.4 0.94 3.2E-05 47.1 6.2 82 333-414 373-476 (655)
23 2j0j_A Focal adhesion kinase 1 63.6 8.9 0.0003 38.7 5.6 25 384-408 195-219 (656)
24 3kmh_A D-lyxose isomerase; cup 36.1 12 0.00042 35.7 1.5 68 147-227 113-185 (246)
25 2kon_A Uncharacterized protein 22.6 38 0.0013 27.2 1.9 24 108-131 29-52 (82)
No 1
>3epy_A Acyl-COA-binding domain-containing protein 7; acyl-COA binding protein, fatty acid, lipid metabolism, structural genomics; HET: COA PLM; 2.00A {Homo sapiens} SCOP: a.11.1.1
Probab=99.98 E-value=1.6e-32 Score=222.59 Aligned_cols=87 Identities=46% Similarity=0.809 Sum_probs=85.4
Q ss_pred CChHHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy9651 328 TSIDEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYVKKVQ 407 (414)
Q Consensus 328 ~sLEEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYIELVn 407 (414)
++|+++|++|++.|++++.+|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||++++
T Consensus 2 m~L~~~F~~A~~~vk~l~~~p~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~g~s~eeA~~~Yi~~v~ 81 (89)
T 3epy_A 2 MALQADFDRAAEDVRKLKARPDDGELKELYGLYKQAIVGDINIACPGMLDLKGKAKWEAWNLKKGLSTEDATSAYISKAK 81 (89)
T ss_dssp CHHHHHHHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCCTTTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHHHHHhhCCCCCCCCcccchHHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Confidence 56999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC
Q psy9651 408 ELLAKYQ 414 (414)
Q Consensus 408 eLlpKYG 414 (414)
+++++||
T Consensus 82 ~l~~ky~ 88 (89)
T 3epy_A 82 ELIEKYG 88 (89)
T ss_dssp HHHHHHC
T ss_pred HHhhhhc
Confidence 9999998
No 2
>1st7_A ACBP, acyl-COA-binding protein; four helix bundle, transport protein; NMR {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.3e-32 Score=217.16 Aligned_cols=85 Identities=45% Similarity=0.919 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy9651 330 IDEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYVKKVQEL 409 (414)
Q Consensus 330 LEEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYIELVneL 409 (414)
|+++|++|++.|++++..|+++++|+|||||||||+|||++++||+||++||+||+||++++|||++|||++||++++++
T Consensus 1 l~~~F~~A~~~v~~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeA~~~YI~~v~~l 80 (86)
T 1st7_A 1 VSQLFEEKAKAVNELPTKPSTDELLELYALYKQATVGDNDKEKPGIFNMKDRYKWEAWENLKGKSQEDAEKEYIALVDQL 80 (86)
T ss_dssp CHHHHHHHHHHHTSCSSCCCHHHHHHHHHHHHHHHHCSCCCCCCCSSCHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccCCcCHHHHHHHHHHHHHHhhCCCCCCCCCccCHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcC
Q psy9651 410 LAKYQ 414 (414)
Q Consensus 410 lpKYG 414 (414)
.++||
T Consensus 81 ~~~~~ 85 (86)
T 1st7_A 81 IAKYS 85 (86)
T ss_dssp HHHHC
T ss_pred hhhhc
Confidence 99997
No 3
>1hbk_A ACBP, acyl-COA binding protein; fatty acid metabolism; HET: COA MYR; 2.0A {Plasmodium falciparum} SCOP: a.11.1.1
Probab=99.97 E-value=1.2e-31 Score=216.27 Aligned_cols=85 Identities=25% Similarity=0.477 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHhcC--CCCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHHHHHH
Q psy9651 330 IDEDFKKAVEDVKTLT--KRPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYVKKVQ 407 (414)
Q Consensus 330 LEEeFeaAVe~VKsLp--sKpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYIELVn 407 (414)
|+++|++|+++|++++ ..|++|++|+|||||||||+|||++++||+||++||+||+||++++|||++|||++||++++
T Consensus 2 l~~~F~~A~~~v~~l~~~~~~~~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~~v~ 81 (89)
T 1hbk_A 2 MAQVFEECVSFINGLPRTINLPNELKLDLYKYYKQSTIGNCNIKEPSAHKYIDRKKYEAWKSVENLNREDAQKRYVDIVS 81 (89)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTSHHHHHHHHHHHHTTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCcCCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHhHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 6899999999999999 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcC
Q psy9651 408 ELLAKYQ 414 (414)
Q Consensus 408 eLlpKYG 414 (414)
++.++|+
T Consensus 82 ~l~~~~~ 88 (89)
T 1hbk_A 82 EIFPYWQ 88 (89)
T ss_dssp HHCTTTT
T ss_pred HHccccc
Confidence 9999996
No 4
>2cb8_A Acyl-COA-binding protein; acyl-coenzyme A binding protein, fatty acid, acetylation, alternative splicing, lipid-binding, transport; HET: MYA; 1.4A {Homo sapiens} PDB: 2fj9_A 1aca_A* 1hb6_A 1hb8_A 1nti_A 1nvl_A* 2abd_A 2fdq_A
Probab=99.97 E-value=3.9e-31 Score=213.11 Aligned_cols=84 Identities=48% Similarity=0.861 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q psy9651 331 DEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYVKKVQELL 410 (414)
Q Consensus 331 EEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYIELVneLl 410 (414)
+++|++|++.|++++..|++|++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||+++++++
T Consensus 3 ~~~F~~A~~~vk~l~~~~~~~~~L~lYalyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~Yi~~v~~l~ 82 (87)
T 2cb8_A 3 QAEFEKAAEEVRHLKTKPSDEEMLFIYGHYKQATVGDINTERPGMLDFTGKAKWDAWNELKGTSKEDAMKAYINKVEELK 82 (87)
T ss_dssp HHHHHHHHHHGGGCSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCCcCHHHHHHHHHHHHhhhhCCCCCCCCCcccHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcC
Q psy9651 411 AKYQ 414 (414)
Q Consensus 411 pKYG 414 (414)
++||
T Consensus 83 ~~~~ 86 (87)
T 2cb8_A 83 KKYG 86 (87)
T ss_dssp HHHC
T ss_pred HHhC
Confidence 9997
No 5
>2cop_A Acyl-coenzyme A binding domain containing 6; acyl COA binding protein, COA binding protein, lipid binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.97 E-value=1.4e-30 Score=217.90 Aligned_cols=88 Identities=34% Similarity=0.622 Sum_probs=85.3
Q ss_pred CCChHHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q psy9651 327 MTSIDEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYVKKV 406 (414)
Q Consensus 327 ~~sLEEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYIELV 406 (414)
..+|+++|++|+++|++++..|+++++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||+++
T Consensus 5 ~~~l~~~F~~A~~~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gms~eeAm~~YI~lv 84 (109)
T 2cop_A 5 SSGLAELFEKAAAHLQGLIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVV 84 (109)
T ss_dssp CCCSHHHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHHTCSCCSCCCCSSCHHHHHHHHHHHSCTTCCHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHhhcCCCCCCCCCccCHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 55689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcC
Q psy9651 407 QELLAKYQ 414 (414)
Q Consensus 407 neLlpKYG 414 (414)
+++.++|+
T Consensus 85 ~~l~~~~~ 92 (109)
T 2cop_A 85 KKLDPGWN 92 (109)
T ss_dssp HHHCTTCC
T ss_pred HHHhhhhc
Confidence 99999985
No 6
>2cqu_A Peroxisomal D3,D2-enoyl-COA isomerase; acyl-COA binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.96 E-value=2.6e-30 Score=219.21 Aligned_cols=92 Identities=37% Similarity=0.669 Sum_probs=88.0
Q ss_pred cCCCCCChHHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHH
Q psy9651 323 LRPSMTSIDEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDY 402 (414)
Q Consensus 323 ~~~~~~sLEEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkY 402 (414)
-.+.|++++++|++|++.|+.++..|+++++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++|
T Consensus 9 ~~~~m~~~~~~F~~A~~~vk~l~~~p~~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gms~eeAm~~Y 88 (116)
T 2cqu_A 9 NRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNY 88 (116)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHCCSCCCHHHHHHHHHHHTTTTTCSCCSCCCCTTCHHHHHHHHHHHHHCSCCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 34568889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcC
Q psy9651 403 VKKVQELLAKYQ 414 (414)
Q Consensus 403 IELVneLlpKYG 414 (414)
|++++++.++|+
T Consensus 89 I~lv~~l~~~~~ 100 (116)
T 2cqu_A 89 VDLVSSLSPSLE 100 (116)
T ss_dssp HHHHHHHCSCCC
T ss_pred HHHHHHHccccc
Confidence 999999999885
No 7
>3fp5_A Acyl-COA binding protein; ACBP, cacao disease, fatty acid metabolism, lipid binding protein; HET: MES; 1.61A {Moniliophthora perniciosa} SCOP: a.11.1.0
Probab=99.96 E-value=5.2e-30 Score=214.32 Aligned_cols=87 Identities=43% Similarity=0.714 Sum_probs=83.6
Q ss_pred CChHHHHHHHHHHHHhcCC----CCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHH
Q psy9651 328 TSIDEDFKKAVEDVKTLTK----RPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYV 403 (414)
Q Consensus 328 ~sLEEeFeaAVe~VKsLps----KpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYI 403 (414)
++++++|++|+++|++++. +|+++++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||
T Consensus 2 ~~~~~~F~~A~~~vk~l~~~g~~~ps~~~~L~LYalyKQAt~Gd~~~~~Pg~~d~~~raKw~AW~~l~gmS~eeA~~~YI 81 (106)
T 3fp5_A 2 HMSKAKFDKAVEIVQSLPKDGPIKPTQDEQLYFYKYFKQATVGDVNISRPGLMDFTGKAKWDAWKSVEGTSKEVAYQKYV 81 (106)
T ss_dssp CCCHHHHHHHHHHHHHCCSSSSSCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccchHHHHHHHHHHHccCCCHHHHHHHHH
Confidence 5679999999999999984 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcC
Q psy9651 404 KKVQELLAKYQ 414 (414)
Q Consensus 404 ELVneLlpKYG 414 (414)
++++++++++|
T Consensus 82 ~~v~~l~~~~~ 92 (106)
T 3fp5_A 82 EKLLEILKKAD 92 (106)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHhcccC
Confidence 99999999875
No 8
>3flv_A Acyl-COA-binding domain-containing protein 5; lipid binding, structural genomics, struct genomics consortium, SGC, lipid-binding, membrane; HET: STE COA; 1.70A {Homo sapiens}
Probab=99.96 E-value=3.2e-30 Score=220.10 Aligned_cols=98 Identities=29% Similarity=0.565 Sum_probs=84.0
Q ss_pred chhhhhcCCCCCChHHHHHHHHHHHHhcCC----CCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCC
Q psy9651 317 SDLIRYLRPSMTSIDEDFKKAVEDVKTLTK----RPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKG 392 (414)
Q Consensus 317 ~dli~~~~~~~~sLEEeFeaAVe~VKsLps----KpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKG 392 (414)
.|++-.+...|.+|+++|++|+++|++++. +|++|++|+|||||||||+|||+.++||+||++||+||+||++++|
T Consensus 11 ~~~~~~~~~~~~dLe~~F~~A~~~Vk~l~~~g~~~ps~d~~L~LYaLyKQAT~Gd~~~~~Pg~~d~~graKw~AW~~l~g 90 (119)
T 3flv_A 11 VDLGTENLYFQSMHETRFEAAVKVIQSLPKNGSFQPTNEMMLKFYSFYKQATEGPCKLSRPGFWDPIGRYKWDAWSSLGD 90 (119)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHTCSCCSCCCCTTCHHHHHHHHHHHHTTT
T ss_pred ccccchhhhhhhHHHHHHHHHHHHHHhCcccCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCccCHHHHHHHHHHHHccC
Confidence 355555556788899999999999999874 7999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhcC
Q psy9651 393 TSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 393 MSKEEAMrkYIELVneLlpKYG 414 (414)
||++|||++||+++++++++++
T Consensus 91 mS~eeAm~~YI~~v~~l~~~~~ 112 (119)
T 3flv_A 91 MTKEEAMIAYVEEMKKIIETMP 112 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999874
No 9
>2lbb_A Acyl COA binding protein; protein binding, structural genomi seattle structural genomics center for infectious disease,; NMR {Babesia bovis}
Probab=99.96 E-value=2.3e-30 Score=213.46 Aligned_cols=84 Identities=38% Similarity=0.721 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHhcC-CCCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q psy9651 331 DEDFKKAVEDVKTLT-KRPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYVKKVQEL 409 (414)
Q Consensus 331 EEeFeaAVe~VKsLp-sKpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYIELVneL 409 (414)
.++|++|++.|++++ .+|++|++|+|||||||||+|||++++||+||++||+||+||++++|||++|||++||++++++
T Consensus 11 ~~~F~~A~~~vk~l~~~~ps~~~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~graKw~AW~~l~gmS~eeAm~~YI~lv~~l 90 (96)
T 2lbb_A 11 ADDFDAAVKYVSNTTTMMASNDDKLCFYKYYKQATVGDCNKPKPGMLQLQEKYKWEAWNALRGMSTESAKEAYVKLLDTL 90 (96)
T ss_dssp SSTHHHHHHHHHHCCCSCCCTTTTTHHHHHHHHTTTSSCCCCCCCSSCSHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhcCCCCCCCCCcccHHhHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 468999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcC
Q psy9651 410 LAKYQ 414 (414)
Q Consensus 410 lpKYG 414 (414)
+++||
T Consensus 91 ~~~~~ 95 (96)
T 2lbb_A 91 APSWR 95 (96)
T ss_dssp CGGGT
T ss_pred hchhc
Confidence 99997
No 10
>2wh5_A Acyl-COA-binding domain-containing protein 4; alternative splicing, fatty acid metabolism, lipid transport, lipid binding protein; HET: STE ST9 COA; 2.60A {Homo sapiens}
Probab=99.96 E-value=2.4e-29 Score=210.11 Aligned_cols=85 Identities=32% Similarity=0.643 Sum_probs=80.7
Q ss_pred ChHHHHHHHHHHHHhcCC----CCChHHHHHHHHhhhhhhcCCCCCCCCCccchhHHHHHHHHHhcCCCCHHHHHHHHHH
Q psy9651 329 SIDEDFKKAVEDVKTLTK----RPTDEELLEIYALFKQATEGDNTTARPSMFNLKAKYKWECWTKLKGTSSDQAKQDYVK 404 (414)
Q Consensus 329 sLEEeFeaAVe~VKsLps----KpSnEdKLeLYALYKQATvGDCnt~RPGmFD~vGRAKWDAWKaLKGMSKEEAMrkYIE 404 (414)
+|+++|++|++.+++++. +|+++++|+|||||||||+|||+.++||+||++||+||+||++++|||++|||++||+
T Consensus 7 ~l~~~F~~A~~~vk~l~~~g~~~ps~e~~L~LYaLyKQAt~Gd~~~~~Pg~~d~~~~aKw~AW~~l~gms~eeA~~~YI~ 86 (106)
T 2wh5_A 7 DCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYYKQATMGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYIT 86 (106)
T ss_dssp --CHHHHHHHHHHHHSCSSCSCCCCHHHHHHHHHHHHHHHHCSCCSCCCCTTCHHHHHHHHHHHTTTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhhccCCCCCCCCCcccHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 478999999999999986 7999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhc
Q psy9651 405 KVQELLAKY 413 (414)
Q Consensus 405 LVneLlpKY 413 (414)
+++++++++
T Consensus 87 ~v~~l~~k~ 95 (106)
T 2wh5_A 87 EMKLVAQKV 95 (106)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999875
No 11
>1mix_A Talin; focal adhesion, integrin binding, FERM domain, cytoskeleton, structural protein; 1.75A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 PDB: 1miz_B 1mk7_B 1mk9_B 1y19_B 3g9w_A 2hrj_A 2g35_A* 2k00_A 2h7d_A* 2h7e_A* 2kgx_B
Probab=98.54 E-value=3.6e-07 Score=78.45 Aligned_cols=84 Identities=19% Similarity=0.230 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCC--CCCccchh------------HHHHHHHHHhcCCCCH
Q psy9651 330 IDEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTA--RPSMFNLK------------AKYKWECWTKLKGTSS 395 (414)
Q Consensus 330 LEEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~--RPGmFD~v------------GRAKWDAWKaLKGMSK 395 (414)
..--|.++...+-+..-..+.++.+.|.||..||..||++.. .|+.++.. .+.-+++|++++|||+
T Consensus 18 ~~l~y~Q~~~dil~g~~~~~~~~a~~Laal~~qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~i~~~~~~~~g~s~ 97 (206)
T 1mix_A 18 LNLLYVQARDDILNGSHPVSFDKACEFAGYQCQIQFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMSE 97 (206)
T ss_dssp HHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGSTTCCHHHHHHHHHHTTTCCH
T ss_pred HHHHHHHHHHHHHCCccccCHHHHHHHHHHhhhheecCCCcccccCCccchHhhCCHHHhhcccHHHHHHHHHHccCCCH
Confidence 445667777777665667899999999999999999999864 46654433 6777999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcC
Q psy9651 396 DQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 396 EEAMrkYIELVneLlpKYG 414 (414)
+||+.+|++++.++ +.||
T Consensus 98 ~~A~~~yL~~~~~l-~~yG 115 (206)
T 1mix_A 98 IEAKVRYVKLARSL-KTYG 115 (206)
T ss_dssp HHHHHHHHHHHHHS-TTTT
T ss_pred HHHHHHHHHHHHhC-cccC
Confidence 99999999999875 6665
No 12
>4f7g_A Talin-1; alpha-helix bundle, integrin activation, cell adhesion; 2.05A {Mus musculus}
Probab=96.71 E-value=0.007 Score=53.33 Aligned_cols=87 Identities=16% Similarity=0.183 Sum_probs=63.2
Q ss_pred CCChHHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCC--CCccc-----------hhHHH-HHHHHHhcCC
Q psy9651 327 MTSIDEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTAR--PSMFN-----------LKAKY-KWECWTKLKG 392 (414)
Q Consensus 327 ~~sLEEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~R--PGmFD-----------~vGRA-KWDAWKaLKG 392 (414)
...+.--|..+...+-.-.-..+.++-+.|=||--||..||++... ++.++ -.... =.++|++++|
T Consensus 26 p~~l~l~ylQ~~~dil~G~~~~~~e~a~~LAal~~Qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~~~~I~~~h~~~~g 105 (222)
T 4f7g_A 26 PVQLNLLYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQ 105 (222)
T ss_dssp CCHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCSSCSCGGGTSCGGGGGGCCHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHHHHCCCCchhcccCccchhhccCHHHHhhhhHHHHHHHHHhccC
Confidence 3345556677776665555567889999999999999999998642 32211 11112 2578999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhcC
Q psy9651 393 TSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 393 MSKEEAMrkYIELVneLlpKYG 414 (414)
||++||+.+|++++.++ +.||
T Consensus 106 ~s~~eA~~~yL~~~~~l-~~yG 126 (222)
T 4f7g_A 106 MSEIEAKVRYVKLARSL-KTYG 126 (222)
T ss_dssp CCHHHHHHHHHHHHHTS-TTTT
T ss_pred CCHHHHHHHHHHHHhhc-cccC
Confidence 99999999999999875 5555
No 13
>1ef1_A Moesin; membrane, FERM domain, tail domain, membrane protein; 1.90A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1sgh_A 1j19_A 2emt_A 2ems_A 2d10_A 2d11_A 2yvc_A 2d2q_A 2zpy_A 1gc7_A 1gc6_A 1ni2_A
Probab=96.59 E-value=0.0077 Score=54.52 Aligned_cols=82 Identities=17% Similarity=0.133 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCC--CCccc--------hhH-----HHH-----HHHHHhcC
Q psy9651 332 EDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTAR--PSMFN--------LKA-----KYK-----WECWTKLK 391 (414)
Q Consensus 332 EeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~R--PGmFD--------~vG-----RAK-----WDAWKaLK 391 (414)
--|.++...+-...=..+.++.+.|=||--||..||++... |+.++ +.. ... -++|++++
T Consensus 98 l~y~Q~~~dil~g~~~~~~e~a~~Laal~~q~~~Gd~~~~~~~~~~l~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~ 177 (294)
T 1ef1_A 98 LFFLQVKEGILNDDIYCPPETAVLLASYAVQSKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEERIQVWHEEHR 177 (294)
T ss_dssp HHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHHHBCCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHhCCCCccccChhhccccccCCHHHHhhcCCCHHHHHHHHHHHHHHcc
Confidence 34455555554434466788999999999999999998543 33321 100 122 37899999
Q ss_pred CCCHHHHHHHHHHHHHHHHhhcC
Q psy9651 392 GTSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 392 GMSKEEAMrkYIELVneLlpKYG 414 (414)
|||++||+.+|++++.+ .|.||
T Consensus 178 g~s~~~A~~~yL~~~~~-lp~yG 199 (294)
T 1ef1_A 178 GMLREDAVLEYLKIAQD-LEMYG 199 (294)
T ss_dssp TCCHHHHHHHHHHHHTT-STTTT
T ss_pred CCCHHHHHHHHHHHHcc-cCccC
Confidence 99999999999999986 56666
No 14
>3qij_A Protein 4.1; cytoskeleton, structural genomics, structural genomics conso SGC; 1.80A {Homo sapiens} PDB: 1gg3_A 3bin_A 2he7_A 2rq1_A
Probab=96.53 E-value=0.0051 Score=56.93 Aligned_cols=80 Identities=13% Similarity=0.089 Sum_probs=55.8
Q ss_pred HHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCC--CCCcc----------chhHHHHHHHHHhcCCCCHHHHHHH
Q psy9651 334 FKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTA--RPSMF----------NLKAKYKWECWTKLKGTSSDQAKQD 401 (414)
Q Consensus 334 FeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~--RPGmF----------D~vGRAKWDAWKaLKGMSKEEAMrk 401 (414)
|.++...+-.-.=..+.++-+.|-||-=||..||++.. .|+.+ +-..+.=.++|++++|||++||+.+
T Consensus 114 ylQ~~~dil~G~~~c~~e~a~~LAAl~~Qae~Gd~~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~h~~~~g~s~~eA~~~ 193 (296)
T 3qij_A 114 CLQLRQDIVAGRLPCSFATLALLGSYTIQSELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLE 193 (296)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHCSCCHHHHTTCCCTTSCCSSSCCHHHHHHHHHHHHTCCSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCHHHHHHHHHHHHHHhcCCCCccccchhhCcHhhcCCcCHHHHHHHHHHHHHHccCCCHHHHHHH
Confidence 44555444443435678888899999999999998732 12221 1112222578999999999999999
Q ss_pred HHHHHHHHHhhcC
Q psy9651 402 YVKKVQELLAKYQ 414 (414)
Q Consensus 402 YIELVneLlpKYG 414 (414)
|++++.+ .+.||
T Consensus 194 yL~~a~~-l~~yG 205 (296)
T 3qij_A 194 FLENAKK-LSMYG 205 (296)
T ss_dssp HHHHHTT-STTTT
T ss_pred HHHHHhc-ccccC
Confidence 9999988 56676
No 15
>1h4r_A Merlin; FERM, neurofibromatosis, NF2, structural protein, cytoskeleton, anti-oncogene; 1.8A {Homo sapiens} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 1isn_A 3u8z_A
Probab=96.45 E-value=0.01 Score=54.43 Aligned_cols=81 Identities=17% Similarity=0.186 Sum_probs=58.0
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCC--CCccch------------------hHHHHHHHHHhcCC
Q psy9651 333 DFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTAR--PSMFNL------------------KAKYKWECWTKLKG 392 (414)
Q Consensus 333 eFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~R--PGmFD~------------------vGRAKWDAWKaLKG 392 (414)
-|.++...+-.-.=..+.++.+.|=||--||..||++... |+.++. ..+.=.++|++++|
T Consensus 119 ~y~Q~~~dil~g~~~~~~e~a~~Laal~~Qa~~Gd~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~I~~~~~~~~g 198 (314)
T 1h4r_A 119 FFLQVKKQILDEKIYCPPEASVLLASYAVQAKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEERITAWYAEHRG 198 (314)
T ss_dssp HHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTTTTTCCCSCHHHHTTSCCCHHHHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHhCCCccCCHHHHHHHHHHHHHHHHCCCCccccchhhcchhhcCCHHHHhhccCCHHHHHHHHHHHHHHcCC
Confidence 3455555554434467889999999999999999998542 332210 01112478999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhcC
Q psy9651 393 TSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 393 MSKEEAMrkYIELVneLlpKYG 414 (414)
||++||+.+|++++.+ .+.||
T Consensus 199 ~s~~eA~~~yL~~~~~-lp~yG 219 (314)
T 1h4r_A 199 RARDEAEMEYLKIAQD-LEMYG 219 (314)
T ss_dssp CCHHHHHHHHHHHHTT-STTTT
T ss_pred CCHHHHHHHHHHHHhc-cCccC
Confidence 9999999999999976 46665
No 16
>3ivf_A Talin-1; FERM domain, cell membrane, cell projection, cytoskeleton, M phosphoprotein, cell adhesion, structural protein; 1.94A {Mus musculus} PDB: 2kma_A 2kc1_A
Probab=95.92 E-value=0.037 Score=52.18 Aligned_cols=81 Identities=17% Similarity=0.199 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCC--CCccc-----------hh-HHHHHHHHHhcCCCCHHHH
Q psy9651 333 DFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTAR--PSMFN-----------LK-AKYKWECWTKLKGTSSDQA 398 (414)
Q Consensus 333 eFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~R--PGmFD-----------~v-GRAKWDAWKaLKGMSKEEA 398 (414)
-|..+...+-...=..+.++.+.|=||--||..||++... ++.++ -. .+.=.++|++++|||++||
T Consensus 186 ~y~Q~~~dil~G~~~c~~e~a~~LAAl~~qae~Gd~~~~~~~~~~~~l~~~lP~~~~~~~~e~~I~~~~~~~~g~s~~eA 265 (371)
T 3ivf_A 186 LYVQARDDILNGSHPVSFDKACEFAGFQCQIQFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEA 265 (371)
T ss_dssp HHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHHCSCCTTTSCTTCSCGGGTSCGGGTTSCHHHHHHHHHHHTTTCCHHHH
T ss_pred HHHHhhHHHhCceeecCHHHHHHHHHHHHHHHhCCCChhhcccchhcccccCCHHHhCchHHHHHHHHHHHccCCCHHHH
Confidence 3444554444433356778889999999999999998542 22211 01 1222578999999999999
Q ss_pred HHHHHHHHHHHHhhcC
Q psy9651 399 KQDYVKKVQELLAKYQ 414 (414)
Q Consensus 399 MrkYIELVneLlpKYG 414 (414)
+.+|++++.++ +.||
T Consensus 266 ~~~yL~~~~~l-~~yG 280 (371)
T 3ivf_A 266 KVRYVKLARSL-KTYG 280 (371)
T ss_dssp HHHHHHHHHHS-TTTT
T ss_pred HHHHHHHHhcc-cccC
Confidence 99999999764 5555
No 17
>3au4_A Myosin-X; protein-protein complex, motor protein cargo transportation, protein-apoptosis complex; 1.90A {Homo sapiens} PDB: 3au5_A 3pzd_A
Probab=94.92 E-value=0.074 Score=52.87 Aligned_cols=83 Identities=28% Similarity=0.345 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCC--CCccc------hh-----------------------
Q psy9651 331 DEDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTAR--PSMFN------LK----------------------- 379 (414)
Q Consensus 331 EEeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~R--PGmFD------~v----------------------- 379 (414)
.--|..+...+-...-..+.++-+.|-||--|+..||++... +.+-+ +.
T Consensus 322 ~lly~Q~~~dil~G~~~~~~e~a~~LAAl~lQ~~~GD~~~~~~~~~l~~~lP~~~l~~~~~~~~k~~s~~~~~l~~~~~~ 401 (555)
T 3au4_A 322 AFMFEQAHEAVIHGHHPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKARISQSTKTFSFRTGSVVRQKVE 401 (555)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHCSCCTTCCCCCGGGTSCCHHHHHHHHHTTCCEECCTTSCCEECCC
T ss_pred HhhHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHcCCCccccchhhhhhhCCHHHhhhhhccccccccccccccccccch
Confidence 345677777766555567899999999999999999988532 11100 00
Q ss_pred ----------------HHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q psy9651 380 ----------------AKYKWECWTKLKGTSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 380 ----------------GRAKWDAWKaLKGMSKEEAMrkYIELVneLlpKYG 414 (414)
.+.=.+.|++++|||++||+.+|++++.++ +.||
T Consensus 402 ~~~~~~~W~~~~~~~~~~~I~~~~~~~~g~s~~eA~~~yL~~~~~l-p~yG 451 (555)
T 3au4_A 402 EEQMLDMWIKEEVSSARASIIDKWRKFQGMNQEQAMAKYMALIKEW-PGYG 451 (555)
T ss_dssp CHHHHHHHTHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHTTS-TTTT
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhC-CCcC
Confidence 011136789999999999999999999877 7776
No 18
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=94.86 E-value=0.072 Score=54.50 Aligned_cols=81 Identities=19% Similarity=0.285 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCC--CCccc--------hhH-----HHH-----HHHHHhcCC
Q psy9651 333 DFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTAR--PSMFN--------LKA-----KYK-----WECWTKLKG 392 (414)
Q Consensus 333 eFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~R--PGmFD--------~vG-----RAK-----WDAWKaLKG 392 (414)
-|..+...+-...-..+.++-+.|=||--||..||++... |+.++ +.. ... .+.|+++.|
T Consensus 102 lYlQvk~dIl~G~l~c~~e~a~~LAAL~lQae~GDy~~~~~~~~yl~~~~~lP~~vl~~~~~s~e~~~~~I~~~hk~l~G 181 (575)
T 2i1j_A 102 FYLQVKNAILSDEIYCPPETSVLLASYAVQARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQSITNWWQEHRG 181 (575)
T ss_dssp HHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHCSCCTTTCCTTTTTTCCCSCHHHHHTBCCCHHHHHHHHHHHHGGGTT
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHhcCCChhhcccccccccccCCHHHHhhcCCCHHHHHHHHHHHHHHccC
Confidence 3445554444333356778888999999999999998543 44321 100 122 367999999
Q ss_pred CCHHHHHHHHHHHHHHHHhhcC
Q psy9651 393 TSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 393 MSKEEAMrkYIELVneLlpKYG 414 (414)
||+.+|+..|++++.+ .|.||
T Consensus 182 ~s~~eA~~~yL~~a~~-lp~YG 202 (575)
T 2i1j_A 182 MLREDAMMEYLKIAQD-LEMYG 202 (575)
T ss_dssp CCHHHHHHHHHHHHTT-STTTT
T ss_pred CCHHHHHHHHHHHHHh-ccccC
Confidence 9999999999999986 47776
No 19
>2al6_A Focal adhesion kinase 1; transferase; 2.35A {Gallus gallus} SCOP: a.11.2.1 b.55.1.5 d.15.1.4 PDB: 2j0m_A* 2aeh_A
Probab=92.67 E-value=0.24 Score=47.27 Aligned_cols=81 Identities=10% Similarity=0.158 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcC-CCCChHHHHHHHHhhhhhhcCCCCCCCCC----c--------c------ch------h--HHHHHH
Q psy9651 333 DFKKAVEDVKTLT-KRPTDEELLEIYALFKQATEGDNTTARPS----M--------F------NL------K--AKYKWE 385 (414)
Q Consensus 333 eFeaAVe~VKsLp-sKpSnEdKLeLYALYKQATvGDCnt~RPG----m--------F------D~------v--GRAKWD 385 (414)
-|.++...+-+-. -..+.++-+.|-||=-|+..||++...+. . + ++ . .+.=.+
T Consensus 117 ~y~Q~r~Dil~g~~~~~~~e~al~LAaL~~q~~~gD~~~~~~~~k~~~~~l~k~~~l~~flP~~~~~~~~~~~~~k~I~~ 196 (375)
T 2al6_A 117 FYQQVKNDYMLEIADQVDQEIALKLGCLEIRRSYGEMRGNALEKKSNYEVLEKDVGLRRFFPKSLLDSVKAKTLRKLIQQ 196 (375)
T ss_dssp HHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHTTCGGGTSCHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCCHHHHHHHHHHHHHHHhhhccchhhcccCCHHHhhhcccHHHhCCHHHHHHhChHHHHHHHHH
Confidence 4445443332222 34678888888888888888887632110 0 0 01 0 111157
Q ss_pred HHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q psy9651 386 CWTKLKGTSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 386 AWKaLKGMSKEEAMrkYIELVneLlpKYG 414 (414)
.|+++.|||++|||.+|++++.+ .+.||
T Consensus 197 ~~k~~~g~s~~eAk~~yL~~~~~-l~~yG 224 (375)
T 2al6_A 197 TFRQFANLNREESILKFFEILSP-VYRFD 224 (375)
T ss_dssp HHHTTTTCCHHHHHHHHHHHHTT-TCCCS
T ss_pred HHHHhhCCCHHHHHHHHHHHHhh-cccCC
Confidence 88899999999999999999988 56666
No 20
>4dxa_B KREV interaction trapped protein 1; GTPase, FERM, protein-protein interaction, GTP binding, CYTO protein binding; HET: GSP; 1.95A {Homo sapiens} PDB: 3u7d_A
Probab=92.49 E-value=0.17 Score=46.99 Aligned_cols=82 Identities=17% Similarity=0.270 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCC--CCCccc---h---------------hHHHHHHHHHhc-
Q psy9651 332 EDFKKAVEDVKTLTKRPTDEELLEIYALFKQATEGDNTTA--RPSMFN---L---------------KAKYKWECWTKL- 390 (414)
Q Consensus 332 EeFeaAVe~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~--RPGmFD---~---------------vGRAKWDAWKaL- 390 (414)
--|..+...+-...=..+.++-..|-||--||..||++.. .|+.++ + -...=.++|+++
T Consensus 116 l~y~Q~~~dil~G~~~c~~e~a~~LAAl~~q~e~Gd~~~~~~~~~~l~~~~l~~~lP~~~~~~~~~~~~~~I~~~h~~~~ 195 (322)
T 4dxa_B 116 ILFDEARYNLLKGFYTAPDAKLITLASLLLQIVYGNYESKKHKQGFLNEENLKSIVPVTKLKSKAPHWTNRILHEYKNLS 195 (322)
T ss_dssp HHHHHHHHHHHHTCCCCCHHHHHHHHHHHHHHHHCSCCHHHHSSSCSCHHHHTTTSCTTTTTTTGGGSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCcccCCHHHHHHHHHHHHHHHhCCCCcccccccccchhhhhhhCCHHHHhcCHHHHHHHHHHHHHhcc
Confidence 3456666666554546678999999999999999998632 233221 0 012226789999
Q ss_pred --CCCCHH--HHHHHHHHHHHHHHhhcC
Q psy9651 391 --KGTSSD--QAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 391 --KGMSKE--EAMrkYIELVneLlpKYG 414 (414)
.|||++ +|+.+|++++.++ |-||
T Consensus 196 ~~~g~s~~~a~a~~~yL~~~~~l-p~yG 222 (322)
T 4dxa_B 196 TSEGVSKEMHHLQRMFLQNCWEI-PTYG 222 (322)
T ss_dssp C--CCCCCHHHHHHHHHHHHHTS-TTTT
T ss_pred cccCCChhHHHHHHHHHHHHhcC-CCcC
Confidence 999975 4699999998754 5554
No 21
>4eku_A Protein-tyrosine kinase 2-beta; proline-rich tyrosine kinase 2, FERM domain, transferase; 3.25A {Homo sapiens}
Probab=91.85 E-value=0.3 Score=47.74 Aligned_cols=83 Identities=10% Similarity=0.103 Sum_probs=51.7
Q ss_pred HHHHHHHH-HHHHhcCCCCChHHHHHHHHhhhhhhcCCCCCCC--------------------CC-ccc---hh--HHHH
Q psy9651 331 DEDFKKAV-EDVKTLTKRPTDEELLEIYALFKQATEGDNTTAR--------------------PS-MFN---LK--AKYK 383 (414)
Q Consensus 331 EEeFeaAV-e~VKsLpsKpSnEdKLeLYALYKQATvGDCnt~R--------------------PG-mFD---~v--GRAK 383 (414)
+=-|.++. ++++....+.+.|+-+.|-||=-|+-.||.+... |. +.. .. .+.=
T Consensus 135 ~ylY~Q~r~D~l~g~~~~~~~e~al~LAaL~~q~~~gd~~~~a~~~k~~~~~l~k~~~lk~flP~~l~~~ik~k~~rk~I 214 (392)
T 4eku_A 135 LYFYQQLRNDYMQRYASKVSEGMALQLGCLELRRFFKDMPHNALDKKSNFELLEKEVGLDLFFPKQMQENLKPKQFRKMI 214 (392)
T ss_dssp HHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHTTTSCTTGGGSHHHHHHHHHHTCGGGTSCHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhhcchhhhccCCCHHHHhhhccHHHhcCHHHHhhcCHHHHHHHH
Confidence 33454444 3334332356777777788887777777765311 11 000 00 1111
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHhhcC
Q psy9651 384 WECWTKLKGTSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 384 WDAWKaLKGMSKEEAMrkYIELVneLlpKYG 414 (414)
.+..+++.|+|.++||.+|++.++++ +.||
T Consensus 215 ~~~~kk~~~ls~~eakl~YL~~l~~L-p~yG 244 (392)
T 4eku_A 215 QQTFQQYASLREEECVMKFFNTLAGF-ANID 244 (392)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHTTS-SCCS
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHhh-hccC
Confidence 34677789999999999999999997 8887
No 22
>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}
Probab=86.41 E-value=0.94 Score=47.08 Aligned_cols=82 Identities=21% Similarity=0.128 Sum_probs=54.2
Q ss_pred HHHHHHHHHHhcCCCCChH-HHHHHHHhhhhhhcCCCCCCC----------CC-ccch-hHHHH-----HHHHHhc----
Q psy9651 333 DFKKAVEDVKTLTKRPTDE-ELLEIYALFKQATEGDNTTAR----------PS-MFNL-KAKYK-----WECWTKL---- 390 (414)
Q Consensus 333 eFeaAVe~VKsLpsKpSnE-dKLeLYALYKQATvGDCnt~R----------PG-mFD~-vGRAK-----WDAWKaL---- 390 (414)
-|..+...+-...=..+.| +...|-||--||..||++... |. ...- ..... .++|+++
T Consensus 373 lYlQ~k~dIl~Grlpc~~E~~a~~LAAl~~Qae~Gd~~~~~~~~~~L~~~lP~~~l~~~~~~~~w~~~I~~~hkk~~~~~ 452 (655)
T 3pvl_A 373 IYQQVVRGVKFGEYRCEKEDDLAELASQQYFVDYGSEMILERLLSLVPTYIPDREITPLKNLEKWAQLAIAAHKKGIYAQ 452 (655)
T ss_dssp HHHHHHHHHHHTSSCCSSHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHSCGGGCCSSSCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhcccccCccCCChHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHhCCHHHHhccCCHHHHHHHHHHHHHhhhccc
Confidence 4556665554433345544 899999999999999986321 11 0000 11222 3677887
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhcC
Q psy9651 391 KGTSSDQAKQDYVKKVQELLAKYQ 414 (414)
Q Consensus 391 KGMSKEEAMrkYIELVneLlpKYG 414 (414)
+|||+++|+.+|++++.+-.|-||
T Consensus 453 ~g~s~~eAk~~yL~~a~~~lp~YG 476 (655)
T 3pvl_A 453 RRTDSQKVKEDVVNYARFKWPLLF 476 (655)
T ss_dssp CSSCHHHHHHHHHHHHHHHCTTTS
T ss_pred cCCCHHHHHHHHHHHHHHhccccC
Confidence 999999999999999955556666
No 23
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=63.63 E-value=8.9 Score=38.75 Aligned_cols=25 Identities=0% Similarity=0.174 Sum_probs=22.2
Q ss_pred HHHHHhcCCCCHHHHHHHHHHHHHH
Q psy9651 384 WECWTKLKGTSSDQAKQDYVKKVQE 408 (414)
Q Consensus 384 WDAWKaLKGMSKEEAMrkYIELVne 408 (414)
.+.|++..+++.++||-+|++.+..
T Consensus 195 ~~~~k~~~~~~~~~~~lk~l~~l~~ 219 (656)
T 2j0j_A 195 QQTFRQFANLNREESILKFFEILSP 219 (656)
T ss_dssp HHHHGGGTTCCHHHHHHHHHHHHGG
T ss_pred HHHHHHHhcCCHHHHHHHHHHHhcc
Confidence 6888999999999999999977665
No 24
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=36.14 E-value=12 Score=35.66 Aligned_cols=68 Identities=22% Similarity=0.259 Sum_probs=39.0
Q ss_pred cCcceeeEeeeccceeeechhhhHHHHHHhhhccccCceeEe--eeccch--hhHh-hhccccccccceeeEEEeeecCC
Q psy9651 147 HSPAQVCLSVQSSHLRCHYSALSRVYAVLRDFSSRYGGQLTL--KNTGLS--MTRA-LYGATKEFDEKVEVWTKVKLAPG 221 (414)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (414)
=-|.|+|- +||-.. -..||-.|.||.|.+ -|.+-. ++.. +-=........+.+|+++.|.||
T Consensus 113 ~~~gQ~~P--------~H~H~~-----K~EdiinRgGG~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PG 179 (246)
T 3kmh_A 113 VRDAQVTP--------MHFHWR-----KREDIINRGGGNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPG 179 (246)
T ss_dssp ECBTCEEE--------EEEESS-----CCEEEEEEEESCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTT
T ss_pred ccCCCCCC--------cccCCC-----ccccEEecCCCeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCC
Confidence 34777774 344433 457999999999954 343311 0000 00000111234667899999999
Q ss_pred cceEEE
Q psy9651 222 AQLKLV 227 (414)
Q Consensus 222 ~~~kl~ 227 (414)
.|+-|-
T Consensus 180 ESiTl~ 185 (246)
T 3kmh_A 180 ESICLP 185 (246)
T ss_dssp CEEEEC
T ss_pred CeEecC
Confidence 998764
No 25
>2kon_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Chromobacterium violaceum}
Probab=22.62 E-value=38 Score=27.21 Aligned_cols=24 Identities=42% Similarity=0.722 Sum_probs=18.8
Q ss_pred eeeeccccccccCCCccccccccc
Q psy9651 108 YIDFVGDQTFRPLPEYYPELYDQS 131 (414)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~ 131 (414)
.|.-||-..-.|+|.-|||.||-.
T Consensus 29 lirkvgvpdrtpipttypefydle 52 (82)
T 2kon_A 29 LIRKVGVPDRTPIPTTYPEFYDLE 52 (82)
T ss_dssp EEEESSCTTSCCCCBCCSCCCSSH
T ss_pred HHHHhCCCCCCCCCccCcchhccc
Confidence 355567666779999999999964
Done!