Query psy9665
Match_columns 207
No_of_seqs 130 out of 1952
Neff 9.9
Searched_HMMs 46136
Date Sat Aug 17 01:31:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9665.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/9665hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176|consensus 100.0 3.4E-36 7.4E-41 252.4 17.8 199 1-204 229-442 (537)
2 COG0318 CaiC Acyl-CoA syntheta 100.0 1E-33 2.2E-38 241.3 18.0 199 1-204 218-435 (534)
3 KOG1177|consensus 100.0 1.1E-33 2.4E-38 226.8 13.7 197 2-203 280-494 (596)
4 PRK06334 long chain fatty acid 100.0 9.5E-32 2.1E-36 229.6 18.7 200 1-205 228-445 (539)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 1.3E-31 2.9E-36 223.9 16.4 196 2-204 218-430 (528)
6 PTZ00342 acyl-CoA synthetase; 100.0 4E-31 8.6E-36 231.8 16.5 199 1-205 351-606 (746)
7 PRK07788 acyl-CoA synthetase; 100.0 1.3E-30 2.8E-35 222.9 18.0 198 2-205 253-462 (549)
8 PLN02574 4-coumarate--CoA liga 100.0 1.9E-30 4E-35 222.5 18.2 199 2-205 249-465 (560)
9 PLN02736 long-chain acyl-CoA s 100.0 1.8E-30 3.9E-35 226.1 17.4 198 1-205 266-523 (651)
10 PLN02860 o-succinylbenzoate-Co 100.0 2.7E-30 5.8E-35 221.7 16.7 198 1-205 217-449 (563)
11 PLN02614 long-chain acyl-CoA s 100.0 1.4E-30 3E-35 227.2 15.1 199 1-205 273-532 (666)
12 PLN02861 long-chain-fatty-acid 100.0 1.4E-30 3.1E-35 226.9 15.3 198 1-205 270-529 (660)
13 PF00501 AMP-binding: AMP-bind 100.0 9.1E-31 2E-35 216.5 12.9 192 1-195 200-415 (417)
14 PLN03051 acyl-activating enzym 100.0 6.3E-30 1.4E-34 216.5 17.2 201 1-205 164-392 (499)
15 PRK13295 cyclohexanecarboxylat 100.0 2.5E-29 5.5E-34 214.9 19.6 199 1-205 242-454 (547)
16 PLN02654 acetate-CoA ligase 100.0 1.2E-29 2.5E-34 221.5 17.7 202 1-205 321-548 (666)
17 PTZ00237 acetyl-CoA synthetase 100.0 1.8E-29 3.9E-34 219.7 16.7 198 2-205 301-527 (647)
18 PRK06839 acyl-CoA synthetase; 100.0 3.9E-29 8.5E-34 211.0 18.0 198 1-205 194-406 (496)
19 PLN02246 4-coumarate--CoA liga 100.0 5.8E-29 1.3E-33 212.2 18.6 199 2-205 229-447 (537)
20 PRK13382 acyl-CoA synthetase; 100.0 6.6E-29 1.4E-33 212.0 18.3 198 2-205 242-451 (537)
21 PRK04319 acetyl-CoA synthetase 100.0 6.2E-29 1.3E-33 213.5 18.1 198 2-205 251-467 (570)
22 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 8.3E-29 1.8E-33 211.3 18.7 199 1-205 240-452 (538)
23 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 8.6E-29 1.9E-33 214.7 18.2 201 2-205 283-510 (625)
24 PRK08314 long-chain-fatty-acid 100.0 8.5E-29 1.8E-33 211.4 17.9 199 1-205 235-451 (546)
25 PRK06145 acyl-CoA synthetase; 100.0 1E-28 2.2E-33 208.6 17.9 199 2-205 195-408 (497)
26 PRK07529 AMP-binding domain pr 100.0 1.6E-28 3.5E-33 213.3 19.4 198 1-205 258-480 (632)
27 PRK08633 2-acyl-glycerophospho 100.0 1.3E-28 2.8E-33 225.9 19.6 198 2-205 828-1054(1146)
28 PRK05677 long-chain-fatty-acid 100.0 1.7E-28 3.7E-33 210.4 18.5 198 2-205 256-468 (562)
29 PRK06060 acyl-CoA synthetase; 100.0 1.3E-28 2.8E-33 216.3 17.7 197 2-205 192-400 (705)
30 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.9E-28 6.3E-33 206.5 18.8 199 1-205 206-429 (515)
31 PRK07656 long-chain-fatty-acid 100.0 2.9E-28 6.4E-33 206.3 18.6 199 2-205 212-427 (513)
32 PRK00174 acetyl-CoA synthetase 100.0 2.8E-28 6.1E-33 211.9 18.5 201 2-205 292-518 (637)
33 TIGR02316 propion_prpE propion 100.0 2.9E-28 6.2E-33 211.6 18.3 198 2-205 279-507 (628)
34 PRK08043 bifunctional acyl-[ac 100.0 3.3E-28 7.2E-33 214.0 18.6 196 1-205 410-626 (718)
35 COG1021 EntE Peptide arylation 100.0 2.1E-29 4.5E-34 198.6 9.7 198 1-204 234-448 (542)
36 PRK12492 long-chain-fatty-acid 100.0 4.6E-28 9.9E-33 207.8 18.9 198 2-205 263-476 (562)
37 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 5.2E-28 1.1E-32 206.0 17.9 198 2-205 229-443 (527)
38 PRK07638 acyl-CoA synthetase; 100.0 9.4E-28 2E-32 202.4 19.3 195 2-205 189-396 (487)
39 PRK13383 acyl-CoA synthetase; 100.0 7.7E-28 1.7E-32 204.4 18.5 198 2-205 222-431 (516)
40 PRK08316 acyl-CoA synthetase; 100.0 6.5E-28 1.4E-32 204.7 18.1 199 2-205 217-430 (523)
41 PRK12583 acyl-CoA synthetase; 100.0 7.8E-28 1.7E-32 205.9 17.8 199 2-205 247-463 (558)
42 COG1022 FAA1 Long-chain acyl-C 100.0 1.7E-28 3.7E-33 208.0 13.4 190 1-204 237-484 (613)
43 PLN02387 long-chain-fatty-acid 100.0 1.7E-28 3.6E-33 215.1 13.8 200 1-205 296-571 (696)
44 PLN02330 4-coumarate--CoA liga 100.0 9.7E-28 2.1E-32 205.1 18.1 199 2-205 232-452 (546)
45 PRK05851 long-chain-fatty-acid 100.0 3.7E-28 8E-33 206.9 15.2 201 1-205 198-430 (525)
46 PRK05605 long-chain-fatty-acid 100.0 9.7E-28 2.1E-32 206.2 17.7 198 2-205 267-480 (573)
47 PRK05857 acyl-CoA synthetase; 100.0 8.2E-28 1.8E-32 205.4 17.1 196 2-205 219-437 (540)
48 PRK13390 acyl-CoA synthetase; 100.0 1.4E-27 3E-32 202.1 18.2 197 2-205 200-414 (501)
49 PRK07786 long-chain-fatty-acid 100.0 1.3E-27 2.8E-32 204.2 18.2 198 2-205 221-434 (542)
50 PTZ00216 acyl-CoA synthetase; 100.0 2.5E-28 5.4E-33 214.2 13.9 196 1-205 314-572 (700)
51 PRK08315 AMP-binding domain pr 100.0 1.6E-27 3.4E-32 204.2 18.5 199 2-205 245-462 (559)
52 PRK06188 acyl-CoA synthetase; 100.0 1.2E-27 2.7E-32 203.4 17.6 198 1-205 213-428 (524)
53 PRK07787 acyl-CoA synthetase; 100.0 1.5E-27 3.2E-32 200.6 17.8 196 2-205 174-386 (471)
54 PRK07008 long-chain-fatty-acid 100.0 1.8E-27 3.9E-32 203.2 18.5 198 2-205 224-444 (539)
55 PRK06710 long-chain-fatty-acid 100.0 1.2E-27 2.5E-32 205.3 17.2 199 1-205 253-466 (563)
56 PRK08180 feruloyl-CoA synthase 100.0 8.8E-28 1.9E-32 208.1 16.3 197 1-204 256-479 (614)
57 PRK09088 acyl-CoA synthetase; 100.0 2.7E-27 5.8E-32 199.6 18.1 198 1-205 180-396 (488)
58 PRK07059 Long-chain-fatty-acid 100.0 2.2E-27 4.8E-32 203.3 17.3 198 2-205 257-470 (557)
59 PRK03640 O-succinylbenzoic aci 100.0 3.1E-27 6.7E-32 198.9 17.5 195 2-205 187-395 (483)
60 TIGR03205 pimA dicarboxylate-- 100.0 4.7E-27 1E-31 200.7 18.4 198 2-205 243-456 (541)
61 TIGR02262 benz_CoA_lig benzoat 100.0 5.4E-27 1.2E-31 198.8 18.2 198 2-205 208-419 (508)
62 PRK07470 acyl-CoA synthetase; 100.0 3.4E-27 7.4E-32 200.8 16.5 197 2-205 211-429 (528)
63 PRK12467 peptide synthase; Pro 100.0 2.6E-27 5.6E-32 235.1 17.5 198 1-205 3282-3506(3956)
64 TIGR01734 D-ala-DACP-lig D-ala 100.0 7.3E-27 1.6E-31 197.5 17.8 198 2-205 187-408 (502)
65 PRK07514 malonyl-CoA synthase; 100.0 8.4E-27 1.8E-31 197.2 18.1 196 2-205 202-412 (504)
66 PRK12406 long-chain-fatty-acid 100.0 1.2E-26 2.6E-31 196.7 19.0 198 2-205 201-414 (509)
67 TIGR01733 AA-adenyl-dom amino 99.9 5.3E-27 1.2E-31 193.3 16.2 196 2-205 166-390 (408)
68 PRK09274 peptide synthase; Pro 99.9 3.8E-27 8.2E-32 201.6 15.8 192 2-205 220-455 (552)
69 PRK06155 crotonobetaine/carnit 99.9 1E-26 2.2E-31 198.8 18.3 197 1-205 225-435 (542)
70 PLN02430 long-chain-fatty-acid 99.9 6.4E-27 1.4E-31 204.1 16.8 199 1-205 270-529 (660)
71 PRK07769 long-chain-fatty-acid 99.9 2.9E-27 6.2E-32 205.5 14.5 201 1-205 225-498 (631)
72 PRK10524 prpE propionyl-CoA sy 99.9 8.4E-27 1.8E-31 202.4 17.4 198 2-205 280-508 (629)
73 PRK08751 putative long-chain f 99.9 1E-26 2.2E-31 199.3 17.5 198 2-205 259-472 (560)
74 PRK06187 long-chain-fatty-acid 99.9 1E-26 2.2E-31 197.0 17.2 198 2-205 213-430 (521)
75 PRK05852 acyl-CoA synthetase; 99.9 1.4E-26 3E-31 197.5 18.0 199 1-205 221-443 (534)
76 PRK06087 short chain acyl-CoA 99.9 1.2E-26 2.5E-31 198.4 17.5 197 2-205 233-445 (547)
77 PRK08276 long-chain-fatty-acid 99.9 1.1E-26 2.5E-31 196.5 17.2 198 1-205 191-404 (502)
78 PRK08974 long-chain-fatty-acid 99.9 2.1E-26 4.5E-31 197.4 18.8 198 2-205 255-467 (560)
79 PRK10946 entE enterobactin syn 99.9 1.2E-26 2.6E-31 198.0 17.2 198 2-205 228-444 (536)
80 PRK12582 acyl-CoA synthetase; 99.9 4.1E-27 8.8E-32 204.3 14.4 197 1-204 268-491 (624)
81 PRK03584 acetoacetyl-CoA synth 99.9 2.7E-26 5.8E-31 200.2 19.2 197 3-205 311-533 (655)
82 PRK12476 putative fatty-acid-- 99.9 6.1E-27 1.3E-31 202.8 14.5 200 1-205 239-510 (612)
83 PRK13391 acyl-CoA synthetase; 99.9 3.3E-26 7.2E-31 194.1 18.5 196 2-205 205-417 (511)
84 KOG1256|consensus 99.9 7.3E-27 1.6E-31 196.8 13.4 192 1-197 306-556 (691)
85 PRK10252 entF enterobactin syn 99.9 1.7E-26 3.6E-31 214.3 17.0 198 2-205 644-872 (1296)
86 TIGR01217 ac_ac_CoA_syn acetoa 99.9 3.8E-26 8.2E-31 199.1 17.8 199 2-205 311-534 (652)
87 PRK05620 long-chain-fatty-acid 99.9 3.9E-26 8.5E-31 196.4 17.7 198 1-205 228-465 (576)
88 PRK12316 peptide synthase; Pro 99.9 1.7E-26 3.6E-31 232.4 17.4 198 1-205 700-921 (5163)
89 PRK08008 caiC putative crotono 99.9 4.4E-26 9.6E-31 193.5 17.4 197 2-205 219-433 (517)
90 PRK07445 O-succinylbenzoic aci 99.9 1.8E-26 3.8E-31 193.3 14.4 190 1-205 164-359 (452)
91 PLN03052 acetate--CoA ligase; 99.9 5.4E-26 1.2E-30 199.9 18.1 200 2-205 402-624 (728)
92 PRK06814 acylglycerophosphoeth 99.9 7.9E-26 1.7E-30 207.7 19.7 196 1-205 838-1045(1140)
93 TIGR03443 alpha_am_amid L-amin 99.9 2.6E-26 5.6E-31 214.3 16.4 196 2-205 461-713 (1389)
94 PRK06164 acyl-CoA synthetase; 99.9 6.6E-26 1.4E-30 193.4 17.5 197 1-205 226-441 (540)
95 PRK12316 peptide synthase; Pro 99.9 4.1E-26 8.9E-31 229.7 17.6 199 1-205 4739-4964(5163)
96 PRK06178 acyl-CoA synthetase; 99.9 1.5E-25 3.2E-30 192.5 18.5 200 1-205 255-477 (567)
97 PRK04813 D-alanine--poly(phosp 99.9 1.6E-25 3.5E-30 189.2 17.6 198 2-205 189-410 (503)
98 PRK06018 putative acyl-CoA syn 99.9 1.5E-25 3.3E-30 191.5 17.4 197 2-205 225-445 (542)
99 PRK12467 peptide synthase; Pro 99.9 1.8E-25 3.9E-30 222.1 18.0 198 2-205 1764-1989(3956)
100 PRK07868 acyl-CoA synthetase; 99.9 2.6E-25 5.7E-30 201.2 17.4 198 1-205 650-871 (994)
101 PRK05691 peptide synthase; Val 99.9 2.2E-25 4.8E-30 222.8 17.6 197 2-205 1319-1540(4334)
102 PRK13388 acyl-CoA synthetase; 99.9 1.3E-24 2.9E-29 185.7 17.4 195 2-205 196-415 (540)
103 PLN03102 acyl-activating enzym 99.9 2.2E-24 4.8E-29 185.7 16.3 195 2-205 232-455 (579)
104 PRK05691 peptide synthase; Val 99.9 5E-24 1.1E-28 213.3 18.2 196 2-205 3915-4137(4334)
105 TIGR01923 menE O-succinylbenzo 99.9 9.7E-24 2.1E-28 175.5 16.5 189 2-205 157-355 (436)
106 PRK07867 acyl-CoA synthetase; 99.9 1.6E-23 3.5E-28 178.6 17.9 193 2-205 198-416 (529)
107 PLN02479 acetate-CoA ligase 99.9 1.4E-23 2.9E-28 180.4 16.4 196 2-205 241-465 (567)
108 PRK07768 long-chain-fatty-acid 99.9 2.5E-23 5.3E-28 177.9 17.5 201 2-205 199-449 (545)
109 KOG1175|consensus 99.9 1.4E-23 3.1E-28 177.0 14.6 198 3-204 287-509 (626)
110 PRK09192 acyl-CoA synthetase; 99.9 1.8E-23 3.9E-28 180.1 15.4 201 1-205 222-473 (579)
111 PRK08279 long-chain-acyl-CoA s 99.9 4.2E-23 9.2E-28 178.4 17.5 195 1-205 244-474 (600)
112 PRK05850 acyl-CoA synthetase; 99.9 3E-23 6.5E-28 178.6 14.8 198 2-205 212-471 (578)
113 PRK07798 acyl-CoA synthetase; 99.9 1.5E-22 3.2E-27 172.2 18.2 197 2-205 224-443 (533)
114 PRK09029 O-succinylbenzoic aci 99.9 1.7E-22 3.8E-27 169.3 16.9 178 2-205 181-366 (458)
115 PRK08162 acyl-CoA synthetase; 99.9 3.9E-22 8.5E-27 170.5 18.2 198 1-205 227-451 (545)
116 PRK07824 O-succinylbenzoic aci 99.9 8.6E-22 1.9E-26 160.2 16.9 178 2-205 79-268 (358)
117 PRK08308 acyl-CoA synthetase; 99.9 1.3E-21 2.8E-26 162.1 17.9 179 2-205 147-326 (414)
118 KOG1180|consensus 99.9 5.1E-23 1.1E-27 168.2 8.6 199 1-205 283-551 (678)
119 KOG1179|consensus 99.8 1.3E-19 2.9E-24 148.7 15.7 196 1-204 287-522 (649)
120 TIGR02372 4_coum_CoA_lig 4-cou 99.8 2.7E-18 5.9E-23 140.9 13.2 168 1-205 142-310 (386)
121 TIGR02155 PA_CoA_ligase phenyl 99.8 9.7E-18 2.1E-22 139.5 14.7 178 14-204 137-329 (422)
122 COG1020 EntF Non-ribosomal pep 99.7 4.1E-15 8.9E-20 129.7 16.2 196 4-204 414-630 (642)
123 TIGR03335 F390_ftsA coenzyme F 99.6 4.4E-15 9.6E-20 124.3 14.7 144 4-156 137-287 (445)
124 PTZ00297 pantothenate kinase; 99.5 3.2E-14 6.9E-19 131.6 11.2 176 1-204 649-871 (1452)
125 COG1541 PaaK Coenzyme F390 syn 99.5 9.2E-13 2E-17 107.6 12.2 182 11-199 149-350 (438)
126 TIGR02304 aden_form_hyp probab 99.0 1E-08 2.2E-13 85.3 11.7 109 32-154 175-286 (430)
127 PF04443 LuxE: Acyl-protein sy 97.8 0.0011 2.4E-08 54.3 14.1 161 19-193 162-351 (365)
128 KOG3628|consensus 97.8 0.0003 6.5E-09 63.5 10.8 159 5-165 992-1197(1363)
129 KOG3628|consensus 97.4 0.0018 3.8E-08 58.7 10.1 182 10-192 323-594 (1363)
130 KOG1178|consensus 97.0 0.0089 1.9E-07 54.8 10.8 100 15-116 256-371 (1032)
131 PF03321 GH3: GH3 auxin-respon 92.5 0.8 1.7E-05 39.7 8.2 120 69-204 266-407 (528)
132 PRK02261 methylaspartate mutas 78.6 7.8 0.00017 27.1 5.4 45 7-51 15-61 (137)
133 PLN02620 indole-3-acetic acid- 78.1 50 0.0011 29.4 11.5 43 69-113 303-346 (612)
134 TIGR02370 pyl_corrinoid methyl 77.7 8.6 0.00019 28.7 5.8 79 7-88 96-183 (197)
135 cd02070 corrinoid_protein_B12- 77.3 23 0.00049 26.5 8.0 78 7-86 94-179 (201)
136 cd02069 methionine_synthase_B1 76.7 12 0.00026 28.4 6.3 79 7-89 100-186 (213)
137 COG0318 CaiC Acyl-CoA syntheta 72.9 1.8 3.8E-05 37.5 1.2 40 161-200 401-441 (534)
138 PLN02247 indole-3-acetic acid- 71.2 76 0.0017 28.3 11.1 44 69-113 292-335 (606)
139 cd02067 B12-binding B12 bindin 67.2 34 0.00073 22.9 6.4 46 7-52 11-58 (119)
140 PRK07769 long-chain-fatty-acid 66.0 3.2 6.9E-05 36.6 1.3 41 160-200 463-503 (631)
141 PF02310 B12-binding: B12 bind 65.4 31 0.00067 22.9 5.9 46 5-50 10-57 (121)
142 COG5012 Predicted cobalamin bi 64.5 55 0.0012 25.1 7.3 83 8-90 117-205 (227)
143 PLN02249 indole-3-acetic acid- 64.1 1.1E+02 0.0023 27.4 13.2 120 69-204 301-446 (597)
144 PF06543 Lac_bphage_repr: Lact 61.6 7.9 0.00017 21.6 1.8 25 73-97 22-46 (49)
145 cd02071 MM_CoA_mut_B12_BD meth 61.2 48 0.001 22.4 7.1 85 7-96 11-103 (122)
146 PRK09188 serine/threonine prot 60.0 9.2 0.0002 31.6 2.9 21 171-191 212-233 (365)
147 KOG1176|consensus 59.3 3.4 7.4E-05 35.9 0.3 40 161-200 408-448 (537)
148 TIGR01501 MthylAspMutase methy 59.1 56 0.0012 22.8 6.3 79 7-88 13-100 (134)
149 PRK05851 long-chain-fatty-acid 56.4 5 0.00011 34.5 0.8 38 161-198 396-433 (525)
150 PF09664 DUF2399: Protein of u 54.5 77 0.0017 22.6 9.0 72 20-97 64-138 (152)
151 PTZ00342 acyl-CoA synthetase; 54.4 71 0.0015 29.3 7.7 62 14-79 146-208 (746)
152 PRK05850 acyl-CoA synthetase; 54.3 6.9 0.00015 34.0 1.3 41 160-200 436-476 (578)
153 KOG1794|consensus 53.9 45 0.00097 26.8 5.5 72 69-143 68-141 (336)
154 PRK12476 putative fatty-acid-- 52.3 7.5 0.00016 34.2 1.3 40 161-200 476-515 (612)
155 COG1022 FAA1 Long-chain acyl-C 52.2 7.6 0.00017 34.4 1.3 42 159-200 447-490 (613)
156 cd07100 ALDH_SSADH1_GabD1 Myco 52.2 67 0.0015 27.1 6.9 59 3-61 103-172 (429)
157 PF00818 Ice_nucleation: Ice n 52.0 6.6 0.00014 16.5 0.4 8 104-111 1-8 (16)
158 PTZ00237 acetyl-CoA synthetase 52.0 5.9 0.00013 35.2 0.6 35 15-49 134-169 (647)
159 TIGR01734 D-ala-DACP-lig D-ala 51.8 6.5 0.00014 33.3 0.8 36 162-197 375-410 (502)
160 PRK09029 O-succinylbenzoic aci 51.1 7.2 0.00016 32.7 0.9 36 14-49 69-105 (458)
161 PRK07824 O-succinylbenzoic aci 49.1 7 0.00015 31.6 0.5 40 160-199 233-272 (358)
162 TIGR01217 ac_ac_CoA_syn acetoa 48.1 8 0.00017 34.4 0.8 40 160-199 498-538 (652)
163 PLN02861 long-chain-fatty-acid 47.9 7.6 0.00016 34.6 0.6 40 160-199 492-533 (660)
164 PLN02419 methylmalonate-semial 47.7 1E+02 0.0023 27.5 7.5 60 3-62 256-326 (604)
165 PRK07445 O-succinylbenzoic aci 47.5 8.3 0.00018 32.6 0.8 37 14-50 61-98 (452)
166 PLN02614 long-chain acyl-CoA s 45.7 7.6 0.00017 34.7 0.3 40 160-199 495-536 (666)
167 PLN02766 coniferyl-aldehyde de 45.1 1.1E+02 0.0024 26.5 7.2 60 3-62 165-236 (501)
168 TIGR01780 SSADH succinate-semi 45.1 1E+02 0.0022 26.2 6.9 60 3-62 124-196 (448)
169 PLN02654 acetate-CoA ligase 44.8 9.4 0.0002 34.1 0.7 38 14-51 161-199 (666)
170 PF11974 MG1: Alpha-2-macroglo 44.6 35 0.00075 22.3 3.2 19 125-143 23-42 (97)
171 cd07124 ALDH_PutA-P5CDH-RocA D 43.6 1.1E+02 0.0023 26.7 6.9 60 3-62 173-244 (512)
172 PLN02467 betaine aldehyde dehy 43.0 1.5E+02 0.0032 25.7 7.7 60 3-62 158-229 (503)
173 TIGR03240 arg_catab_astD succi 43.0 1.3E+02 0.0027 25.9 7.2 41 3-43 139-185 (484)
174 PRK10090 aldehyde dehydrogenas 43.0 1.2E+02 0.0027 25.4 7.0 41 3-43 78-124 (409)
175 PLN02278 succinic semialdehyde 42.7 88 0.0019 27.1 6.2 60 3-62 167-238 (498)
176 cd07109 ALDH_AAS00426 Uncharac 42.1 1.3E+02 0.0027 25.6 7.1 69 3-79 124-204 (454)
177 TIGR01722 MMSDH methylmalonic 41.8 1.2E+02 0.0026 26.0 7.0 60 3-62 143-213 (477)
178 cd07085 ALDH_F6_MMSDH Methylma 41.8 1.3E+02 0.0029 25.7 7.2 60 3-62 143-213 (478)
179 cd07113 ALDH_PADH_NahF Escheri 41.7 1.2E+02 0.0027 25.9 7.0 60 3-62 149-219 (477)
180 cd07105 ALDH_SaliADH Salicylal 41.3 1E+02 0.0023 26.0 6.4 60 3-62 105-179 (432)
181 cd07131 ALDH_AldH-CAJ73105 Unc 41.2 96 0.0021 26.5 6.3 41 3-43 142-188 (478)
182 cd07110 ALDH_F10_BADH Arabidop 41.1 1.3E+02 0.0028 25.6 7.0 60 3-62 127-198 (456)
183 PRK08043 bifunctional acyl-[ac 40.9 12 0.00025 33.8 0.7 40 160-199 590-630 (718)
184 cd07139 ALDH_AldA-Rv0768 Mycob 40.8 1.5E+02 0.0032 25.3 7.3 60 3-62 144-214 (471)
185 PLN02736 long-chain acyl-CoA s 40.8 1.4E+02 0.0031 26.5 7.5 61 14-78 119-180 (651)
186 PRK13252 betaine aldehyde dehy 40.3 1.5E+02 0.0033 25.5 7.3 60 3-62 149-219 (488)
187 PLN02860 o-succinylbenzoate-Co 39.9 14 0.00029 32.1 0.9 38 14-51 73-111 (563)
188 PRK03584 acetoacetyl-CoA synth 39.8 12 0.00025 33.3 0.5 38 161-198 498-536 (655)
189 PRK09406 gabD1 succinic semial 39.5 1.4E+02 0.0031 25.4 7.0 41 3-43 130-176 (457)
190 PLN02387 long-chain-fatty-acid 39.1 1.7E+02 0.0036 26.4 7.7 62 14-79 147-209 (696)
191 PRK09192 acyl-CoA synthetase; 39.0 16 0.00035 31.8 1.3 40 14-53 90-137 (579)
192 cd07147 ALDH_F21_RNP123 Aldehy 38.9 1.1E+02 0.0024 25.9 6.3 40 4-43 131-176 (452)
193 cd07119 ALDH_BADH-GbsA Bacillu 38.7 1.1E+02 0.0024 26.2 6.3 60 3-62 141-212 (482)
194 cd07083 ALDH_P5CDH ALDH subfam 38.3 1.4E+02 0.003 25.9 6.7 42 2-43 160-207 (500)
195 cd07111 ALDH_F16 Aldehyde dehy 38.3 1.4E+02 0.0031 25.7 6.8 41 3-43 154-200 (480)
196 cd07095 ALDH_SGSD_AstD N-succi 38.1 1.7E+02 0.0036 24.8 7.1 41 3-43 104-150 (431)
197 cd07138 ALDH_CddD_SSP0762 Rhod 37.6 1.7E+02 0.0037 24.9 7.2 60 3-62 137-208 (466)
198 cd07097 ALDH_KGSADH-YcbD Bacil 36.6 1.3E+02 0.0027 25.8 6.3 41 3-43 142-188 (473)
199 cd04910 ACT_AK-Ectoine_1 ACT d 36.4 1E+02 0.0022 18.9 4.3 49 34-97 19-67 (71)
200 TIGR02188 Ac_CoA_lig_AcsA acet 36.1 16 0.00035 32.1 0.8 38 14-51 129-167 (625)
201 cd02072 Glm_B12_BD B12 binding 36.1 1.5E+02 0.0032 20.6 6.0 77 8-87 12-97 (128)
202 PLN03051 acyl-activating enzym 36.0 16 0.00034 31.2 0.7 38 162-199 358-396 (499)
203 TIGR02299 HpaE 5-carboxymethyl 35.6 1.7E+02 0.0036 25.2 6.9 59 4-62 143-213 (488)
204 TIGR03250 PhnAcAld_DH putative 35.5 1.8E+02 0.0039 24.9 7.0 60 3-62 146-217 (472)
205 cd07148 ALDH_RL0313 Uncharacte 35.2 1.9E+02 0.004 24.7 7.0 41 3-43 131-177 (455)
206 PRK09457 astD succinylglutamic 35.1 2.1E+02 0.0046 24.6 7.4 59 3-61 141-210 (487)
207 cd07145 ALDH_LactADH_F420-Bios 35.1 2E+02 0.0044 24.4 7.2 41 3-43 130-176 (456)
208 PRK11904 bifunctional proline 35.0 1.1E+02 0.0023 29.4 5.9 61 2-62 690-762 (1038)
209 cd07091 ALDH_F1-2_Ald2-like AL 34.6 1.2E+02 0.0026 26.0 5.8 41 3-43 148-194 (476)
210 PRK07529 AMP-binding domain pr 34.5 18 0.00038 32.1 0.8 37 14-51 99-136 (632)
211 PRK07788 acyl-CoA synthetase; 34.2 1.3E+02 0.0029 25.8 6.2 45 14-58 115-160 (549)
212 PRK03137 1-pyrroline-5-carboxy 34.1 2.4E+02 0.0052 24.5 7.6 60 3-62 178-249 (514)
213 cd07112 ALDH_GABALDH-PuuC Esch 33.9 1.8E+02 0.0039 24.8 6.8 41 3-43 131-177 (462)
214 cd07141 ALDH_F1AB_F2_RALDH1 NA 33.5 1.7E+02 0.0037 25.1 6.6 41 3-43 152-198 (481)
215 PRK11121 nrdG anaerobic ribonu 33.4 50 0.0011 23.5 2.9 11 74-84 69-79 (154)
216 PRK11905 bifunctional proline 33.4 1.1E+02 0.0024 29.9 5.8 61 2-62 682-754 (1208)
217 PRK09274 peptide synthase; Pro 33.2 21 0.00046 30.8 1.1 37 14-50 82-119 (552)
218 PRK09088 acyl-CoA synthetase; 33.1 20 0.00043 30.3 0.9 38 14-51 63-101 (488)
219 cd07118 ALDH_SNDH Gluconobacte 33.0 1.9E+02 0.0041 24.6 6.7 41 3-43 126-172 (454)
220 PRK00174 acetyl-CoA synthetase 32.9 20 0.00043 31.7 0.9 38 14-51 139-177 (637)
221 cd07093 ALDH_F8_HMSADH Human a 32.5 2.4E+02 0.0052 23.9 7.3 41 3-43 124-170 (455)
222 cd07559 ALDH_ACDHII_AcoD-like 32.5 2.1E+02 0.0046 24.6 7.0 40 3-42 143-188 (480)
223 PF04915 DltD_N: DltD N-termin 32.5 30 0.00064 20.7 1.3 19 93-113 24-42 (62)
224 KOG1175|consensus 32.4 16 0.00034 32.5 0.2 40 159-198 473-513 (626)
225 PRK11809 putA trifunctional tr 32.2 1.3E+02 0.0027 29.8 5.9 70 2-79 774-855 (1318)
226 cd07120 ALDH_PsfA-ACA09737 Pse 31.6 1.9E+02 0.004 24.7 6.5 60 3-62 124-196 (455)
227 PRK08279 long-chain-acyl-CoA s 31.4 22 0.00047 31.1 0.9 38 161-198 439-477 (600)
228 COG1012 PutA NAD-dependent ald 31.3 2.9E+02 0.0063 23.8 7.5 61 3-63 140-212 (472)
229 cd07089 ALDH_CddD-AldA-like Rh 31.3 1.7E+02 0.0036 25.0 6.1 41 3-43 130-176 (459)
230 cd07149 ALDH_y4uC Uncharacteri 31.3 3.2E+02 0.007 23.1 8.5 41 3-43 130-176 (453)
231 cd07102 ALDH_EDX86601 Uncharac 31.3 2.2E+02 0.0048 24.1 6.9 60 3-62 123-193 (452)
232 TIGR01237 D1pyr5carbox2 delta- 31.3 1.8E+02 0.0038 25.3 6.4 41 3-43 174-220 (511)
233 PRK10411 DNA-binding transcrip 31.2 2.4E+02 0.0051 21.8 6.5 90 17-116 88-185 (240)
234 TIGR03374 ABALDH 1-pyrroline d 31.2 2.3E+02 0.0049 24.4 6.9 40 3-42 144-189 (472)
235 PRK06155 crotonobetaine/carnit 31.0 1.9E+02 0.004 25.0 6.5 47 13-59 86-133 (542)
236 cd07142 ALDH_F2BC Arabidosis a 30.9 2.4E+02 0.0052 24.2 7.0 41 3-43 148-194 (476)
237 TIGR02316 propion_prpE propion 30.7 21 0.00046 31.5 0.7 37 14-50 124-161 (628)
238 PRK09847 gamma-glutamyl-gamma- 30.6 2.3E+02 0.005 24.5 6.9 41 3-43 164-210 (494)
239 PRK13473 gamma-aminobutyraldeh 30.6 1.9E+02 0.0041 24.7 6.4 60 3-62 145-215 (475)
240 PLN02466 aldehyde dehydrogenas 30.5 2.6E+02 0.0057 24.5 7.3 41 3-43 202-248 (538)
241 cd07150 ALDH_VaniDH_like Pseud 30.4 1.7E+02 0.0037 24.7 6.1 41 3-43 126-172 (451)
242 TIGR02275 DHB_AMP_lig 2,3-dihy 30.2 23 0.00049 30.4 0.8 38 14-51 89-127 (527)
243 TIGR01804 BADH glycine betaine 30.1 2.9E+02 0.0062 23.6 7.4 60 3-62 140-211 (467)
244 PTZ00216 acyl-CoA synthetase; 30.0 18 0.00038 32.6 0.1 40 160-199 535-576 (700)
245 PF00455 DeoRC: DeoR C termina 30.0 2.1E+02 0.0045 20.4 5.9 88 19-116 17-112 (161)
246 PRK15398 aldehyde dehydrogenas 29.9 2.2E+02 0.0047 24.5 6.6 39 4-42 137-181 (465)
247 cd07088 ALDH_LactADH-AldA Esch 29.8 2.3E+02 0.0051 24.1 6.8 41 3-43 140-186 (468)
248 cd07106 ALDH_AldA-AAD23400 Str 29.8 2.5E+02 0.0054 23.8 6.9 41 3-43 121-167 (446)
249 PF00171 Aldedh: Aldehyde dehy 29.4 1.3E+02 0.0028 25.7 5.1 68 4-79 134-213 (462)
250 TIGR01238 D1pyr5carbox3 delta- 29.4 2.4E+02 0.0053 24.4 6.8 60 3-62 167-238 (500)
251 TIGR03216 OH_muco_semi_DH 2-hy 29.1 1.8E+02 0.0039 25.0 6.0 41 3-43 146-192 (481)
252 cd07116 ALDH_ACDHII-AcoD Ralst 29.0 2.6E+02 0.0056 24.0 6.9 60 3-62 143-213 (479)
253 cd07094 ALDH_F21_LactADH-like 29.0 3.6E+02 0.0078 22.9 8.5 59 3-61 130-200 (453)
254 TIGR01733 AA-adenyl-dom amino 28.9 1.6E+02 0.0034 23.9 5.6 46 13-58 40-86 (408)
255 cd07114 ALDH_DhaS Uncharacteri 28.9 1.7E+02 0.0036 24.9 5.8 41 3-43 126-172 (457)
256 PF00501 AMP-binding: AMP-bind 28.8 1.5E+02 0.0032 24.3 5.3 39 12-50 60-99 (417)
257 cd06534 ALDH-SF NAD(P)+-depend 28.6 3.2E+02 0.007 22.2 8.8 80 3-93 99-190 (367)
258 cd07144 ALDH_ALD2-YMR170C Sacc 28.5 2.5E+02 0.0054 24.1 6.8 41 3-43 151-197 (484)
259 PF01060 DUF290: Transthyretin 28.5 1.3E+02 0.0027 18.7 3.8 18 125-142 6-23 (80)
260 TIGR02482 PFKA_ATP 6-phosphofr 28.4 1.2E+02 0.0027 24.3 4.6 35 8-42 170-206 (301)
261 cd07090 ALDH_F9_TMBADH NAD+-de 28.4 2.7E+02 0.0058 23.7 6.9 41 3-43 123-169 (457)
262 PRK07008 long-chain-fatty-acid 28.2 27 0.00058 30.1 0.9 41 14-54 80-121 (539)
263 cd07081 ALDH_F20_ACDH_EutE-lik 28.1 2.5E+02 0.0054 23.9 6.6 70 3-80 102-187 (439)
264 PRK11241 gabD succinate-semial 28.0 2.1E+02 0.0045 24.7 6.2 60 3-62 153-224 (482)
265 cd00763 Bacterial_PFK Phosphof 27.9 1.4E+02 0.0029 24.3 4.7 34 9-42 171-206 (317)
266 PRK05857 acyl-CoA synthetase; 27.8 25 0.00054 30.3 0.6 41 13-53 81-122 (540)
267 cd07107 ALDH_PhdK-like Nocardi 27.5 1.9E+02 0.004 24.6 5.8 40 3-42 123-168 (456)
268 cd07092 ALDH_ABALDH-YdcW Esche 27.4 2.1E+02 0.0045 24.2 6.1 40 3-42 125-170 (450)
269 PRK13968 putative succinate se 27.4 2.6E+02 0.0057 23.9 6.7 41 3-43 133-179 (462)
270 cd07078 ALDH NAD(P)+ dependent 27.0 3.8E+02 0.0081 22.4 7.9 42 3-44 103-150 (432)
271 cd07140 ALDH_F1L_FTFDH 10-form 26.9 3.2E+02 0.0069 23.6 7.1 41 3-43 154-200 (486)
272 PF15621 PROL5-SMR: Proline-ri 26.8 44 0.00095 22.6 1.5 25 5-29 3-27 (113)
273 cd07143 ALDH_AldA_AN0554 Asper 26.8 3.2E+02 0.0068 23.6 7.1 41 3-43 151-197 (481)
274 cd07098 ALDH_F15-22 Aldehyde d 26.7 3E+02 0.0066 23.4 6.9 28 3-30 127-156 (465)
275 PRK12582 acyl-CoA synthetase; 26.5 24 0.00051 31.2 0.2 14 15-28 122-135 (624)
276 PF06871 TraH_2: TraH_2; Inte 26.4 90 0.0019 23.2 3.1 25 19-43 37-62 (206)
277 cd07126 ALDH_F12_P5CDH Delta(1 26.3 3.3E+02 0.0073 23.6 7.1 41 3-43 149-195 (489)
278 TIGR03208 cyc_hxne_CoA_lg cycl 26.1 29 0.00063 29.8 0.7 38 14-51 94-132 (538)
279 PRK13383 acyl-CoA synthetase; 26.0 2.1E+02 0.0045 24.4 5.9 45 14-58 101-146 (516)
280 PRK10524 prpE propionyl-CoA sy 26.0 34 0.00075 30.1 1.2 38 14-51 125-163 (629)
281 PRK04319 acetyl-CoA synthetase 25.8 2.3E+02 0.0049 24.6 6.2 45 14-58 114-159 (570)
282 PRK07867 acyl-CoA synthetase; 25.8 2.3E+02 0.0051 24.3 6.2 43 14-56 70-113 (529)
283 cd07084 ALDH_KGSADH-like ALDH 25.6 3.2E+02 0.007 23.2 6.9 60 3-62 107-178 (442)
284 PRK07768 long-chain-fatty-acid 25.1 35 0.00075 29.4 1.0 40 160-199 413-453 (545)
285 PRK06060 acyl-CoA synthetase; 24.8 33 0.00071 30.8 0.8 39 14-52 71-110 (705)
286 PRK06334 long chain fatty acid 24.7 2.5E+02 0.0053 24.3 6.2 45 14-58 83-128 (539)
287 cd07117 ALDH_StaphAldA1 Unchar 24.7 3.7E+02 0.008 23.1 7.1 40 3-42 143-188 (475)
288 cd07086 ALDH_F7_AASADH-like NA 24.7 3E+02 0.0066 23.6 6.6 41 3-43 140-186 (478)
289 cd07125 ALDH_PutA-P5CDH Delta( 24.6 2.5E+02 0.0053 24.5 6.1 40 4-43 175-220 (518)
290 cd07121 ALDH_EutE Ethanolamine 24.5 3.2E+02 0.0069 23.2 6.6 38 4-41 105-148 (429)
291 PRK13390 acyl-CoA synthetase; 24.0 34 0.00074 29.0 0.8 37 14-50 65-102 (501)
292 TIGR02148 Fibro_Slime fibro-sl 23.9 85 0.0018 20.3 2.3 16 175-190 21-36 (90)
293 KOG2451|consensus 23.9 1.6E+02 0.0036 24.7 4.5 42 4-45 167-214 (503)
294 PRK07868 acyl-CoA synthetase; 23.7 34 0.00073 32.4 0.7 42 14-57 513-554 (994)
295 PRK14071 6-phosphofructokinase 23.5 1.3E+02 0.0028 24.9 4.0 34 9-42 187-222 (360)
296 cd07108 ALDH_MGR_2402 Magnetos 23.5 4.6E+02 0.0099 22.3 7.4 40 3-42 124-169 (457)
297 TIGR03098 ligase_PEP_1 acyl-Co 23.3 2.5E+02 0.0055 23.7 5.9 45 12-56 64-109 (515)
298 PRK07656 long-chain-fatty-acid 23.2 2.6E+02 0.0057 23.5 6.0 44 13-56 70-114 (513)
299 PRK14717 putative glycine/sarc 23.2 1E+02 0.0023 20.2 2.6 51 84-136 6-57 (107)
300 cd07152 ALDH_BenzADH NAD-depen 23.1 4.6E+02 0.01 22.1 7.6 59 3-61 117-187 (443)
301 PRK06814 acylglycerophosphoeth 23.1 35 0.00076 32.5 0.7 40 14-53 698-738 (1140)
302 cd07103 ALDH_F5_SSADH_GabD Mit 23.0 4.7E+02 0.01 22.1 8.4 41 3-43 124-170 (451)
303 PRK08314 long-chain-fatty-acid 22.9 2.5E+02 0.0055 24.0 5.9 46 13-58 76-122 (546)
304 TIGR02262 benz_CoA_lig benzoat 22.8 3.2E+02 0.0069 23.2 6.4 47 10-56 66-114 (508)
305 PRK08316 acyl-CoA synthetase; 22.7 2.8E+02 0.006 23.5 6.1 46 13-58 76-122 (523)
306 cd07128 ALDH_MaoC-N N-terminal 22.6 2.4E+02 0.0053 24.6 5.6 42 3-44 151-198 (513)
307 cd07133 ALDH_CALDH_CalB Conife 22.6 4.1E+02 0.0089 22.5 6.9 41 3-43 108-154 (434)
308 PRK13388 acyl-CoA synthetase; 22.5 2.9E+02 0.0063 23.8 6.2 43 14-56 68-111 (540)
309 PRK06710 long-chain-fatty-acid 22.4 44 0.00095 28.9 1.1 39 14-52 90-129 (563)
310 cd07146 ALDH_PhpJ Streptomyces 22.4 4.3E+02 0.0093 22.5 7.0 60 3-62 127-198 (451)
311 PRK11563 bifunctional aldehyde 22.3 2.7E+02 0.0059 25.2 6.0 42 3-44 155-202 (675)
312 PLN02315 aldehyde dehydrogenas 22.2 5.3E+02 0.011 22.5 7.6 28 3-30 161-190 (508)
313 PRK04813 D-alanine--poly(phosp 22.1 43 0.00093 28.3 1.0 38 14-51 68-106 (503)
314 PLN03102 acyl-activating enzym 22.1 2.6E+02 0.0057 24.4 5.9 42 14-55 80-122 (579)
315 cd07122 ALDH_F20_ACDH Coenzyme 22.1 2.9E+02 0.0063 23.5 5.9 60 3-62 102-177 (436)
316 PRK07798 acyl-CoA synthetase; 22.0 3.1E+02 0.0067 23.2 6.2 45 14-58 69-114 (533)
317 PRK06164 acyl-CoA synthetase; 21.9 43 0.00094 28.7 1.0 40 14-53 76-116 (540)
318 cd07123 ALDH_F4-17_P5CDH Delta 21.8 4.7E+02 0.01 22.8 7.3 60 3-62 177-247 (522)
319 PRK08008 caiC putative crotono 21.7 3.3E+02 0.0072 23.1 6.3 43 14-56 78-121 (517)
320 TIGR02278 PaaN-DH phenylacetic 21.7 2.5E+02 0.0055 25.4 5.7 50 3-52 151-209 (663)
321 PRK10946 entE enterobactin syn 21.4 41 0.0009 28.9 0.7 35 15-49 90-125 (536)
322 PRK06187 long-chain-fatty-acid 21.3 3.1E+02 0.0067 23.1 6.1 45 13-57 71-116 (521)
323 PRK13295 cyclohexanecarboxylat 21.2 39 0.00084 29.2 0.5 39 14-52 96-135 (547)
324 TIGR02082 metH 5-methyltetrahy 21.2 2.7E+02 0.0059 27.2 6.0 81 7-89 744-830 (1178)
325 TIGR02483 PFK_mixed phosphofru 21.2 1.7E+02 0.0038 23.8 4.2 34 9-42 173-208 (324)
326 PRK03202 6-phosphofructokinase 21.0 1.9E+02 0.0042 23.5 4.4 34 8-41 171-206 (320)
327 cd07134 ALDH_AlkH-like Pseudom 20.9 4.4E+02 0.0094 22.3 6.7 40 3-42 107-152 (433)
328 PF03808 Glyco_tran_WecB: Glyc 20.8 1.5E+02 0.0033 21.4 3.5 70 21-96 4-74 (172)
329 PLN02430 long-chain-fatty-acid 20.7 5.9E+02 0.013 22.8 7.9 46 14-59 117-163 (660)
330 cd07129 ALDH_KGSADH Alpha-Keto 20.6 5.4E+02 0.012 21.9 7.3 49 14-62 127-189 (454)
331 PRK06839 acyl-CoA synthetase; 20.6 3.8E+02 0.0083 22.5 6.5 45 14-58 69-114 (496)
332 PRK06145 acyl-CoA synthetase; 20.5 49 0.0011 28.0 1.0 39 14-52 68-107 (497)
333 PF07210 DUF1416: Protein of u 20.5 98 0.0021 19.7 2.0 19 125-143 16-34 (85)
334 PRK12492 long-chain-fatty-acid 20.4 44 0.00095 29.0 0.7 39 14-52 91-130 (562)
335 PF13620 CarboxypepD_reg: Carb 20.3 86 0.0019 19.0 1.9 18 126-143 10-27 (82)
336 cd01733 LSm10 The eukaryotic S 20.2 1.4E+02 0.003 18.6 2.7 22 136-157 51-72 (78)
No 1
>KOG1176|consensus
Probab=100.00 E-value=3.4e-36 Score=252.42 Aligned_cols=199 Identities=33% Similarity=0.544 Sum_probs=178.0
Q ss_pred CcccccchHHHHHHHHH-HHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLLLMLQ-AICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~-~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
|+++||+|++|+..++. .+..|+++++.+.|+++.+++.+++|++|+++++|+++..|++.+....++++++|.+.+||
T Consensus 229 l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gg 308 (537)
T KOG1176|consen 229 LCTLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGG 308 (537)
T ss_pred EEechHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecC
Confidence 57899999999997665 67777777777789999999999999999999999999999999877779999999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C-CCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D-VPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~-~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++++.+++++++|+. .+.++||+||+++.++.+.. + ..++++|++++++++++.++.|. +++.||||+||
T Consensus 309 a~~~~~~~~~~~~~l~~~--~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~GEI~vrg 386 (537)
T KOG1176|consen 309 APLSPATLEKVKERLPNV--TVIQGYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQTGEICVRG 386 (537)
T ss_pred CCCCHHHHHHHHHhCCCc--eEEEeeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCceEEEEEC
Confidence 999999999999999965 69999999999988777777 4 38999999999999999999887 58999999999
Q ss_pred CeeeecccccCCCcCcc---------cCCcEEEcCeeEEEEEecCccccccccCCCccc
Q psy9665 155 DEIQFAPYCRKMSLGAY---------LCHWLKLKGKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~~~---------~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
+.+ ++||+++|+.|+. |||..|+++||.++|.+|-+.+.+ .+|++|+
T Consensus 387 ~~i-mkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk--~~G~qv~ 442 (537)
T KOG1176|consen 387 PQV-MKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIK--YGGEQVS 442 (537)
T ss_pred ccc-chhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhhee--eCCEEeC
Confidence 999 9999999987652 778889999999999999888884 4777765
No 2
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-33 Score=241.35 Aligned_cols=199 Identities=28% Similarity=0.449 Sum_probs=174.7
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeC--CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCc-eeEEE
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLP--HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSS-LTNIR 76 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~-lr~~~ 76 (207)
++++|+||++|+.. ++..++.|+++++.+ .|++..++..+.++++|+++++|+++..++..+.....++.+ +|.++
T Consensus 218 l~~lPl~H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~ 297 (534)
T COG0318 218 LSWLPLFHIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVL 297 (534)
T ss_pred EEecChHHHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEE
Confidence 46899999999996 555699999999998 699999999999999999999999999999998776666665 99999
Q ss_pred EccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C--CCCCccccccCCceEEEEeCCCC---CCCcceE
Q psy9665 77 CGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D--VPSSSVGKVMPSMKMKVLVKSHT---MGSQDSF 150 (207)
Q Consensus 77 ~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~--~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel 150 (207)
.||++++++++++++++|+.. .+++.||+||++++++.... . ...+++|+|+|+++++|+|+++. ||++|||
T Consensus 298 ~gg~~~~~~~~~~~~~~~~~~--~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~pg~vGei 375 (534)
T COG0318 298 SGGAPLPPELLERFEERFGPI--AILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLPGEVGEI 375 (534)
T ss_pred ecCCcCCHHHHHHHHHHhCCC--ceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCCCCceEE
Confidence 999999999999999999954 59999999999988777766 4 36788899999999999998875 5779999
Q ss_pred EEEcCeeeecccccCCCcCc---------ccCCcEEEcCeeEEEEEecCccccccccCCCccc
Q psy9665 151 VISGDEIQFAPYCRKMSLGA---------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 151 ~i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
+|+||.+ +.|||++|+.+. .|||..+++++|.++|.||.++.. ..||+||+
T Consensus 376 ~irgp~v-~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I--~~gG~ni~ 435 (534)
T COG0318 376 WVRGPNV-MKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLI--ISGGENIY 435 (534)
T ss_pred EEECchh-hhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEE--EeCCeEEC
Confidence 9999999 999999986543 377777888889999999977777 66999987
No 3
>KOG1177|consensus
Probab=100.00 E-value=1.1e-33 Score=226.79 Aligned_cols=197 Identities=23% Similarity=0.329 Sum_probs=177.3
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+..|+||++|.. .+++++..|+|+|++. .|+|...+++|+++++|+++++|+|+..|++.+...+++++++|.+++||
T Consensus 280 ~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigG 359 (596)
T KOG1177|consen 280 IPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGG 359 (596)
T ss_pred ecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCC
Confidence 568999999976 6999999999999965 79999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC----CCCCCccccccCCceEEEEeCCCCC---CCcceEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL----DVPSSSVGKVMPSMKMKVLVKSHTM---GSQDSFVI 152 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----~~~~~~~G~~~~~~~~~i~d~~~~~---g~~Gel~i 152 (207)
+++++++++.+....... .+..+||+||+++..++... +++..++|+.+++.+.+|+|.+|.+ +..|||++
T Consensus 360 a~~s~eLlk~iv~~~~m~--~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~Gel~i 437 (596)
T KOG1177|consen 360 APVSPELLKLIVNQMNMK--DIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGTKGELLI 437 (596)
T ss_pred CCCCHHHHHHHHHhhCce--eeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCCCceEEE
Confidence 999999999999987766 68899999999977666544 5577799999999999999988874 77899999
Q ss_pred EcCeeeecccccCCCcCcc---------cCCcEEEcCeeEEEEEecCccccccccCCCcc
Q psy9665 153 SGDEIQFAPYCRKMSLGAY---------LCHWLKLKGKQTVLVLGFGSQSCEENLGADNI 203 (207)
Q Consensus 153 ~g~~~~~~gy~~~~~~~~~---------~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~ 203 (207)
||.+. |.|||++++.+.. |||.+.++++|.+.|+||.+..... ||+||
T Consensus 438 RGY~t-Ml~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~r--GGENV 494 (596)
T KOG1177|consen 438 RGYST-MLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIR--GGENV 494 (596)
T ss_pred Eechh-heeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEe--CCccc
Confidence 99999 9999998866543 8999999999999999998887765 88886
No 4
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=9.5e-32 Score=229.55 Aligned_cols=200 Identities=20% Similarity=0.277 Sum_probs=171.6
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
++++|++|++|+. .++.++..|+++++.+ .+++..+++.|+++++|++.++|++++.|++.......+++++|.+++|
T Consensus 228 l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~g 307 (539)
T PRK06334 228 MSFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIG 307 (539)
T ss_pred EEecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEEC
Confidence 3578999999987 4788899999999886 6899999999999999999999999999988765455678899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCC-C---CCCcceEEE
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSH-T---MGSQDSFVI 152 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~-~---~g~~Gel~i 152 (207)
|+++++++.+++++.++.. .+++.||+||++.++..... .....++|+|+++++++|+|+++ . +|+.|||+|
T Consensus 308 G~~l~~~~~~~~~~~~~~~--~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~Gel~v 385 (539)
T PRK06334 308 GDAFKDSLYQEALKTFPHI--QLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGETGLVLT 385 (539)
T ss_pred CccCCHHHHHHHHHHCCCC--eEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCceEEEEE
Confidence 9999999999999998644 59999999999877665543 33456899999999999999653 3 489999999
Q ss_pred EcCeeeecccccCCCcC----------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 153 SGDEIQFAPYCRKMSLG----------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 153 ~g~~~~~~gy~~~~~~~----------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+.+ +.|||++++.+ +.|||+.+++++|.+++.||.++.. +.+|.||++
T Consensus 386 ~g~~~-~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~i--k~~G~~v~p 445 (539)
T PRK06334 386 RGTSL-FSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFV--KIGAEMVSL 445 (539)
T ss_pred ecCcc-cccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeE--EECCEEECH
Confidence 99999 99999998643 2488999999999999999988877 568999875
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=99.98 E-value=1.3e-31 Score=223.90 Aligned_cols=196 Identities=19% Similarity=0.241 Sum_probs=169.7
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeC--CC-CHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEE
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLP--HF-DGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRC 77 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~--~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~ 77 (207)
++.+..|++|.+. ++.+|.+|+|+++.+ ++ +|+.+|++|+++++|.++.+|+.++.|++.....++++++||.+.+
T Consensus 218 ~~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~S 297 (528)
T COG0365 218 NSSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGS 297 (528)
T ss_pred eCCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeec
Confidence 5678899999995 999999999999987 34 4999999999999999999999999999987766789999999999
Q ss_pred ccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCCC---CCcceEEEEc
Q psy9665 78 GAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHTM---GSQDSFVISG 154 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~---g~~Gel~i~g 154 (207)
.|||++++.++++.+.++.+ +.+.||+||++.+......+...++.|+|+||+++.++|++|++ ++ |+|+|+.
T Consensus 298 aGEPLnpe~~~w~~~~~g~~---i~d~~gqTEtg~~~~~~~~~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~-G~Lvi~~ 373 (528)
T COG0365 298 AGEPLNPEAFEWFYSALGVW---ILDIYGQTETGMGFIAGRPPVKNGSSGLPLPGYAVRRVDDEGNPVPPGV-GELVVRL 373 (528)
T ss_pred cCCCCCHHHHHHHHHHhCCC---EeccccccccCccccCCCCCcCCCCCCCCCCCceeEEECCCCCcCCCCc-eEEEEeC
Confidence 99999999999999999976 99999999999655544323345555999999999999999773 66 9999998
Q ss_pred C--eeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCccc
Q psy9665 155 D--EIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 155 ~--~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
+ .+ +.+||++|+.. +.+||++++++||.++++||-+++. +..|..|+
T Consensus 374 ~~p~~-~~~~w~d~er~~~~y~~~~y~tGD~~~~DedGy~~i~GR~DDvI--~vsG~Rig 430 (528)
T COG0365 374 PWPGM-ALTYWNDPERYKEAYFGRWYRTGDWAERDEDGYFWLHGRSDDVI--KVSGKRIG 430 (528)
T ss_pred CCchh-hhhhhCCHHHHHHHHhhceeecCceeEEccCCCEEEEeeccceE--eccCeecc
Confidence 7 67 89999999543 4599999999999999999988777 66776665
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=99.97 E-value=4e-31 Score=231.76 Aligned_cols=199 Identities=18% Similarity=0.246 Sum_probs=165.1
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhC--------CCCCC------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKS--------PLVDQ------ 66 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~~------ 66 (207)
++++|++|++++...+.+++.|+++++.+. ++..+++.|+++++|+++++|.++.++.+. +...+
T Consensus 351 ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a 429 (746)
T PTZ00342 351 LSYLPISHIYERVIAYLSFMLGGTINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKI 429 (746)
T ss_pred EEeCcHHHHHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 468999999999877788999999999865 899999999999999999999999998652 11000
Q ss_pred ----------------------------CCCCceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccC
Q psy9665 67 ----------------------------YDLSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSD 118 (207)
Q Consensus 67 ----------------------------~~l~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~ 118 (207)
.-.+++|.+++||+++++++.++|++.++.. ++++||+||+++..+...
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~---i~~gYGlTEt~~~~~~~~ 506 (746)
T PTZ00342 430 LSLRKSNNNGGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVN---YYQGYGLTETTGPIFVQH 506 (746)
T ss_pred HHHHHHhhcCCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCC---EEEeeccCcccceeeecc
Confidence 0125899999999999999999999988876 999999999977665554
Q ss_pred C-CCCCCcccccc-CCceEEEEeCCC----CCCCcceEEEEcCeeeecccccCCCcCc---------ccCCcEEEcCeeE
Q psy9665 119 L-DVPSSSVGKVM-PSMKMKVLVKSH----TMGSQDSFVISGDEIQFAPYCRKMSLGA---------YLCHWLKLKGKQT 183 (207)
Q Consensus 119 ~-~~~~~~~G~~~-~~~~~~i~d~~~----~~g~~Gel~i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~~~~~ 183 (207)
. ....+++|+|+ |+++++++|.++ .+.+.|||++|||.+ |.|||++|+.|+ .|||..+++.+|.
T Consensus 507 ~~~~~~gsvG~p~~pg~e~ki~d~~~~~~~~~~~~GEl~vrGp~v-~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~ 585 (746)
T PTZ00342 507 ADDNNTESIGGPISPNTKYKVRTWETYKATDTLPKGELLIKSDSI-FSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGS 585 (746)
T ss_pred CCCCCcccccCcCCCcEEEEEecccccccCCCCCceEEEEecCcc-cccccCChhhhhhhcCcCCcccCCcEEEECCCCe
Confidence 4 56778999998 999999998432 234679999999999 999999997654 3788888888999
Q ss_pred EEEEecCccccccccCCCcccc
Q psy9665 184 VLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 184 ~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.++||.+++.+- -+|+||+.
T Consensus 586 l~i~gR~kdlIkl-s~Ge~I~p 606 (746)
T PTZ00342 586 LTFLDRSKGLVKL-SQGEYIET 606 (746)
T ss_pred EEEEccCCCeEEe-CCCEEEch
Confidence 9999999988841 26888874
No 7
>PRK07788 acyl-CoA synthetase; Validated
Probab=99.97 E-value=1.3e-30 Score=222.93 Aligned_cols=198 Identities=19% Similarity=0.214 Sum_probs=173.1
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~~~~~G 79 (207)
..+|++|.+|+..++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.... ...+++++|.+++||
T Consensus 253 ~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG 332 (549)
T PRK07788 253 LPAPMFHATGWAHLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSG 332 (549)
T ss_pred EccchHHHHHHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeC
Confidence 468999999998788899999999999899999999999999999999999999999887654 455688999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++++++++++.++.. +++.||+||++......+. ...++++|+|+++++++++|++++ +|+.|||+|+|
T Consensus 333 ~~l~~~~~~~~~~~~~~~---l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g 409 (549)
T PRK07788 333 SALSPELATRALEAFGPV---LYNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVVGRIFVGN 409 (549)
T ss_pred CCCCHHHHHHHHHHhCcc---ceeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCeEEEEEeC
Confidence 999999999999999876 9999999999866554433 456678999999999999999887 48899999999
Q ss_pred CeeeecccccCCCcC-----cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG-----AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~-----~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.||+++++.. +.|||..+++.+|.+++.||.++..+ .+|+||+.
T Consensus 410 ~~~-~~gY~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~--~~G~~v~p 462 (549)
T PRK07788 410 GFP-FEGYTDGRDKQIIDGLLSSGDVGYFDEDGLLFVDGRDDDMIV--SGGENVFP 462 (549)
T ss_pred CCc-cccccCCCcccccCCceecCceEEEcCCCCEEEeccCcceEE--ECCEEECH
Confidence 999 99999987542 34899999999999999999888875 58888864
No 8
>PLN02574 4-coumarate--CoA ligase-like
Probab=99.97 E-value=1.9e-30 Score=222.51 Aligned_cols=199 Identities=26% Similarity=0.364 Sum_probs=170.0
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC-CCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV-DQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-~~~~l~~lr~~~~~G 79 (207)
+++|++|++|+.. ++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+.... ...+++++|.++++|
T Consensus 249 ~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg 328 (560)
T PLN02574 249 AALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGA 328 (560)
T ss_pred EecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEec
Confidence 5789999999874 66778899999999999999999999999999999999999999887543 345688999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEe-CCCC---CCCcceEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLV-KSHT---MGSQDSFVI 152 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d-~~~~---~g~~Gel~i 152 (207)
+++++++++++++.++.. .+++.||+||++.+...... ....+++|+|+++++++|+| ++++ +|+.|||||
T Consensus 329 ~~l~~~~~~~~~~~~~~~--~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~Gei~v 406 (560)
T PLN02574 329 APLSGKFIQDFVQTLPHV--DFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNCGELWI 406 (560)
T ss_pred ccCCHHHHHHHHHHCCCC--cEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCCeEEEE
Confidence 999999999999998655 69999999999866543222 24567899999999999999 5555 488999999
Q ss_pred EcCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 153 SGDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 153 ~g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+.+ +.|||++++.+ +.|||+.+++.+|.+.++||.++..+ ++|+||++
T Consensus 407 ~g~~~-~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~--~~G~~v~~ 465 (560)
T PLN02574 407 QGPGV-MKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIK--YKGFQIAP 465 (560)
T ss_pred ECcch-hhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheE--ECCEEECH
Confidence 99999 99999998654 24888889988999999999888884 47888875
No 9
>PLN02736 long-chain acyl-CoA synthetase
Probab=99.97 E-value=1.8e-30 Score=226.12 Aligned_cols=198 Identities=17% Similarity=0.196 Sum_probs=163.8
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC-----------------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL----------------- 63 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----------------- 63 (207)
++++|++|++++..++.++..|+++++.+ .++..+++.++++++|+++++|++++.+.+...
T Consensus 266 l~~lPl~h~~~~~~~~~~l~~G~~i~~~~-~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 344 (651)
T PLN02736 266 ISYLPLAHIYERVNQIVMLHYGVAVGFYQ-GDNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAA 344 (651)
T ss_pred EEeCCHHHHHHHHHHHHHHHcCCEEEEeC-CCHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHH
Confidence 46799999999988888899999998876 488899999999999999999999988754210
Q ss_pred ------------CCC------------CCC-CceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccC
Q psy9665 64 ------------VDQ------------YDL-SSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSD 118 (207)
Q Consensus 64 ------------~~~------------~~l-~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~ 118 (207)
... ..+ +++|.+++||+++++++++++++.++.. +++.||+||++..+....
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~---~~~~YG~TE~~~~~~~~~ 421 (651)
T PLN02736 345 YNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGR---VLEGYGMTETSCVISGMD 421 (651)
T ss_pred HHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCC---eEEEechHHhchheeccC
Confidence 000 011 4899999999999999999999998865 999999999987665544
Q ss_pred C-CCCCCccccccCCceEEEEeCC-------CCCCCcceEEEEcCeeeecccccCCCcCc---------ccCCcEEEcCe
Q psy9665 119 L-DVPSSSVGKVMPSMKMKVLVKS-------HTMGSQDSFVISGDEIQFAPYCRKMSLGA---------YLCHWLKLKGK 181 (207)
Q Consensus 119 ~-~~~~~~~G~~~~~~~~~i~d~~-------~~~g~~Gel~i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~~~ 181 (207)
. ....+++|+|+|+++++|+|++ +.+++.|||+|+||.+ +.|||++|+.++ .|||..+++.+
T Consensus 422 ~~~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v-~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d~d 500 (651)
T PLN02736 422 EGDNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPII-FKGYYKDEVQTREVIDEDGWLHTGDIGLWLPG 500 (651)
T ss_pred CCCCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCcc-ccccccCHHHHHhhhccCCCeeccceEEEcCC
Confidence 4 5567899999999999999842 3345689999999999 999999986543 38888888889
Q ss_pred eEEEEEecCcccccccc-CCCcccc
Q psy9665 182 QTVLVLGFGSQSCEENL-GADNISL 205 (207)
Q Consensus 182 ~~~~i~grg~~~~~~~~-~~~~~s~ 205 (207)
|.++++||.+++. .+ +|+||+.
T Consensus 501 G~l~i~GR~kd~i--k~~~G~~V~p 523 (651)
T PLN02736 501 GRLKIIDRKKNIF--KLAQGEYIAP 523 (651)
T ss_pred CcEEEEEechhhe--EcCCCcEech
Confidence 9999999988887 43 7888864
No 10
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=99.97 E-value=2.7e-30 Score=221.68 Aligned_cols=198 Identities=21% Similarity=0.269 Sum_probs=167.7
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~~~~~ 78 (207)
++++|++|.+|+..++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+.... ....++++|.+++|
T Consensus 217 l~~~pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~g 296 (563)
T PLN02860 217 LHTAPLCHIGGLSSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNG 296 (563)
T ss_pred EEecCchhhccHHHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeC
Confidence 3568999999988888999999999999999999999999999999999999999999876432 23457899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C-----------------------CCCCccccccCCce
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D-----------------------VPSSSVGKVMPSMK 134 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~-----------------------~~~~~~G~~~~~~~ 134 (207)
|+++++++++++++.|+.. .+++.||+||++..+..... . ....++|+|+|+++
T Consensus 297 G~~l~~~~~~~~~~~~~~~--~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~ 374 (563)
T PLN02860 297 GGSLSSRLLPDAKKLFPNA--KLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVE 374 (563)
T ss_pred CCcCCHHHHHHHHHhcCCC--ceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcE
Confidence 9999999999999999654 59999999999765443211 1 11237899999999
Q ss_pred EEEEeCCCCCCCcceEEEEcCeeeecccccCCCcCc---------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 135 MKVLVKSHTMGSQDSFVISGDEIQFAPYCRKMSLGA---------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 135 ~~i~d~~~~~g~~Gel~i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++|+|++ +++.|||+|+|+.+ +.|||++|+.+. .|||+.+++.+|.++++||.+++.+ .+|+||+.
T Consensus 375 v~i~~~~--~g~~Gel~v~g~~~-~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~--~~G~~v~p 449 (563)
T PLN02860 375 LKIGLDE--SSRVGRILTRGPHV-MLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIK--TGGENVYP 449 (563)
T ss_pred EEEecCC--CCceeEEEEecCcc-cccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeE--ECCEEccH
Confidence 9999876 78999999999999 999999986543 3888999999999999999888774 58888874
No 11
>PLN02614 long-chain acyl-CoA synthetase
Probab=99.97 E-value=1.4e-30 Score=227.20 Aligned_cols=199 Identities=15% Similarity=0.189 Sum_probs=158.3
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC----------------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV---------------- 64 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------- 64 (207)
++++|++|++++...+..+..|+++++.+ +++..+++.++++++|+++++|++++.+.+....
T Consensus 273 l~~lPl~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a 351 (666)
T PLN02614 273 LSYLPLAHIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSA 351 (666)
T ss_pred EEeccHHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 46899999999876667788999998875 6999999999999999999999999987642100
Q ss_pred ---------------CCC-------------CC-CceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceee
Q psy9665 65 ---------------DQY-------------DL-SSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVT 115 (207)
Q Consensus 65 ---------------~~~-------------~l-~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~ 115 (207)
... .+ +++|.+++||+++++++ +++.+.++.. .++++||+||++...+
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~--~i~~~YG~TE~~~~~~ 428 (666)
T PLN02614 352 FSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACC--HVLQGYGLTESCAGTF 428 (666)
T ss_pred HHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCC--CEEeeCchHhhhhhee
Confidence 000 11 58999999999999875 5666777633 4999999999976554
Q ss_pred ccCC--CCCCCccccccCCceEEEEe-CCC--C---CCCcceEEEEcCeeeecccccCCCcCc--------ccCCcEEEc
Q psy9665 116 FSDL--DVPSSSVGKVMPSMKMKVLV-KSH--T---MGSQDSFVISGDEIQFAPYCRKMSLGA--------YLCHWLKLK 179 (207)
Q Consensus 116 ~~~~--~~~~~~~G~~~~~~~~~i~d-~~~--~---~g~~Gel~i~g~~~~~~gy~~~~~~~~--------~~~d~~~~~ 179 (207)
.... ....+++|+|+|+++++|+| +++ . +|+.|||+||||.+ +.|||++|+.+. .|||..+++
T Consensus 429 ~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v-~~GY~~~pe~T~~~f~dGw~~TGDlg~~d 507 (666)
T PLN02614 429 VSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTL-FSGYYKREDLTKEVLIDGWLHTGDVGEWQ 507 (666)
T ss_pred eeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcc-cccccCCHHHhhhhhccCCcccceEEEEc
Confidence 4333 24568999999999999998 332 2 47899999999999 999999997654 388888899
Q ss_pred CeeEEEEEecCccccccccCCCcccc
Q psy9665 180 GKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 180 ~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+|.+.+.||.+++.+- -+|+||+.
T Consensus 508 ~dG~l~i~gR~kd~ik~-~~G~~V~p 532 (666)
T PLN02614 508 PNGSMKIIDRKKNIFKL-SQGEYVAV 532 (666)
T ss_pred CCCCEEEEEcchhceec-CCCeeecH
Confidence 99999999999888731 26899874
No 12
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=99.97 E-value=1.4e-30 Score=226.94 Aligned_cols=198 Identities=16% Similarity=0.220 Sum_probs=159.5
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhC-------------------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKS------------------- 61 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------- 61 (207)
++++|++|++++...+.+++.|+++++. .+++..+++.|+++++|+++++|++++.+.+.
T Consensus 270 l~~lPl~H~~~~~~~~~~l~~G~~v~~~-~~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a 348 (660)
T PLN02861 270 FSYLPLAHVYDQVIETYCISKGASIGFW-QGDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFA 348 (660)
T ss_pred EEECcHHHHHHHHHHHHHHHhCCEEEEe-CCCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 4689999999987666689999999887 57899999999999999999999999988641
Q ss_pred ------------------CCCCCC-------CC-CceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceee
Q psy9665 62 ------------------PLVDQY-------DL-SSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVT 115 (207)
Q Consensus 62 ------------------~~~~~~-------~l-~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~ 115 (207)
+..... .+ .++|.+++||+++++++. +|.+.++.. .++++||+||+++.++
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~-~~~~~~~~~--~l~~~YG~TE~~~~~~ 425 (660)
T PLN02861 349 YNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE-EFLRVTSCS--VLSQGYGLTESCGGCF 425 (660)
T ss_pred HHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH-HHHHHHcCC--CeeEecchhhhhhcee
Confidence 000000 11 479999999999999975 566677754 4899999999976655
Q ss_pred ccCC--CCCCCccccccCCceEEEEe--CCC----CCCCcceEEEEcCeeeecccccCCCcCc--------ccCCcEEEc
Q psy9665 116 FSDL--DVPSSSVGKVMPSMKMKVLV--KSH----TMGSQDSFVISGDEIQFAPYCRKMSLGA--------YLCHWLKLK 179 (207)
Q Consensus 116 ~~~~--~~~~~~~G~~~~~~~~~i~d--~~~----~~g~~Gel~i~g~~~~~~gy~~~~~~~~--------~~~d~~~~~ 179 (207)
.... ....+++|+|+|+++++|+| ++| .+++.|||+||||.+ +.|||++|+.+. .|||.++++
T Consensus 426 ~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v-~~GY~~~pe~T~~~f~dGw~~TGDlg~~d 504 (660)
T PLN02861 426 TSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTL-FSGYHKRQDLTEEVLIDGWFHTGDIGEWQ 504 (660)
T ss_pred ecccccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcc-cccccCCHHHHHhhhhccCcccCceEEEC
Confidence 4333 33568999999999999998 333 245689999999999 999999998764 389999999
Q ss_pred CeeEEEEEecCcccccccc-CCCcccc
Q psy9665 180 GKQTVLVLGFGSQSCEENL-GADNISL 205 (207)
Q Consensus 180 ~~~~~~i~grg~~~~~~~~-~~~~~s~ 205 (207)
++|.+.+.||.++++ .+ +|+||+.
T Consensus 505 ~dG~l~i~GR~kd~I--k~~~G~~I~p 529 (660)
T PLN02861 505 PNGAMKIIDRKKNIF--KLSQGEYVAV 529 (660)
T ss_pred CCCcEEEEeccccce--EcCCCeEEcH
Confidence 999999999998888 43 6888874
No 13
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=99.97 E-value=9.1e-31 Score=216.47 Aligned_cols=192 Identities=27% Similarity=0.395 Sum_probs=163.2
Q ss_pred CcccccchHHHH-HHHHHHHHhCCeEEEeCCCC---HHHHHHHHHhcCceEeeccHHHHHHHHhCCCCC----CCCCCce
Q psy9665 1 MALVPFFHGYGL-LLMLQAICMNNKLVVLPHFD---GHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVD----QYDLSSL 72 (207)
Q Consensus 1 l~~~Pl~h~~g~-~~~~~~l~~G~~~v~~~~~~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~l~~l 72 (207)
++++|++|.+|+ ..++.++..|+++++.+.+. ++.+++.++++++++++++|++++.+++..... ..+++++
T Consensus 200 l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~l 279 (417)
T PF00501_consen 200 LSFLPLSHIFGLISALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSL 279 (417)
T ss_dssp EESS-TTSHHHHHHHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-
T ss_pred Eeeccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccc
Confidence 367899999999 57999999999999999654 578899999999999999999999998843222 3578899
Q ss_pred eEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccC--C-CCCCCccccccCCceEEEEeCC-CC---CC
Q psy9665 73 TNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSD--L-DVPSSSVGKVMPSMKMKVLVKS-HT---MG 145 (207)
Q Consensus 73 r~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~--~-~~~~~~~G~~~~~~~~~i~d~~-~~---~g 145 (207)
|.++++|+++++++.+++++.++.. .+++.||+||++.+++..+ . ....+++|+|+|+++++|+|++ ++ +|
T Consensus 280 r~v~~~G~~l~~~~~~~~~~~~~~~--~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g 357 (417)
T PF00501_consen 280 RTVISGGEPLPPDLLRRLRKAFGNA--PIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPG 357 (417)
T ss_dssp SEEEEESST-CHHHHHHHHHHHTTS--EEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTT
T ss_pred cccccccccCChhhccccccccccc--cceecccccccceeeeccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999984 5999999999999988662 2 4577899999999999999988 55 48
Q ss_pred CcceEEEEcCeeeecccccCCCc---------CcccCCcEEEcCeeEEEEEecCccccc
Q psy9665 146 SQDSFVISGDEIQFAPYCRKMSL---------GAYLCHWLKLKGKQTVLVLGFGSQSCE 195 (207)
Q Consensus 146 ~~Gel~i~g~~~~~~gy~~~~~~---------~~~~~d~~~~~~~~~~~i~grg~~~~~ 195 (207)
+.|||+|+|+.+ +.||+++|+. -++|||.++++.+|.++++||.++..+
T Consensus 358 ~~Gei~i~~~~~-~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~ 415 (417)
T PF00501_consen 358 EPGEIVIRGPNV-FSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIK 415 (417)
T ss_dssp SEEEEEEESTTS-BSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEE
T ss_pred ccccccccCCcc-ceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEE
Confidence 999999999999 9999998632 235888889988999999999887764
No 14
>PLN03051 acyl-activating enzyme; Provisional
Probab=99.97 E-value=6.3e-30 Score=216.50 Aligned_cols=201 Identities=15% Similarity=0.061 Sum_probs=164.1
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC--CCCCCCCceeEEEE
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL--VDQYDLSSLTNIRC 77 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~~~~ 77 (207)
++.+|++|.+++..++.+++.|+++++.+ .+++..+++.|+++++|++.++|+++..|++... ....++++||.+++
T Consensus 164 l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~i~~ 243 (499)
T PLN03051 164 CWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRVFAS 243 (499)
T ss_pred EEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheEEEe
Confidence 35789999999877888999999999987 4789999999999999999999999999987653 33457889999999
Q ss_pred ccCCCCHHHHHHHHHHhCC-CcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCCC---C--Ccce
Q psy9665 78 GAAPVGKSTLDQVGERLGL-SMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHTM---G--SQDS 149 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~-~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~---g--~~Ge 149 (207)
||+++++++.+++++.++. . .+++.||+||++........ ....+++|+|.++++++|+|+++++ | +.||
T Consensus 244 gG~~~~~~~~~~~~~~~~~~~--~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~Ge 321 (499)
T PLN03051 244 TGEASAVDDVLWLSSVRGYYK--PVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVGE 321 (499)
T ss_pred cCCCCCHHHHHHHHHhccccc--eeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcceE
Confidence 9999999999888764331 2 49999999998754433222 3456789999999999999998873 4 4799
Q ss_pred EEEEcCeee-ecccccCCCc-----C-----------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQ-FAPYCRKMSL-----G-----------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~-~~gy~~~~~~-----~-----------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+++|+.+. +.|||+++.. . +.|||..+++.+|.++++||.++.. +.+|+||+.
T Consensus 322 l~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~i--k~~G~~v~p 392 (499)
T PLN03051 322 VALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTM--NLGGIKTSS 392 (499)
T ss_pred EEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEE--eeCCEECCH
Confidence 999999752 4799976521 1 3689999999999999999988887 568999875
No 15
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=99.97 E-value=2.5e-29 Score=214.89 Aligned_cols=199 Identities=18% Similarity=0.267 Sum_probs=173.3
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++++|++|.+++. .++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.......+++++|.++++|
T Consensus 242 l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G 321 (547)
T PRK13295 242 LMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAG 321 (547)
T ss_pred EEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEec
Confidence 3578999999987 488899999999999999999999999999999999999999999887655566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVIS 153 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~ 153 (207)
+++++++++++.+.++.. +++.||+||++........ .....++|+|+++++++|+|++++ +|+.|||+|+
T Consensus 322 ~~l~~~~~~~~~~~~~~~---~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~Gel~v~ 398 (547)
T PRK13295 322 APIPGALVERARAALGAK---IVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQIGRLQVR 398 (547)
T ss_pred CCCCHHHHHHHHHHhCCC---eEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCCCeEEEE
Confidence 999999999999999765 9999999999877655433 233467899999999999999887 3889999999
Q ss_pred cCeeeecccccCCCcC-------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG-------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~-------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.||+++++.+ +.|||..+++.++.+.+.||.++.. +.+|.||++
T Consensus 399 g~~~-~~gY~~~~~~t~~~~~g~~~TGD~~~~~~~g~l~~~gR~~~~i--~~~G~~v~p 454 (547)
T PRK13295 399 GCSN-FGGYLKRPQLNGTDADGWFDTGDLARIDADGYIRISGRSKDVI--IRGGENIPV 454 (547)
T ss_pred cCcc-cccccCCccccccCCCCCeecceEEEEcCCceEEEEeccCCeE--EECCEEECH
Confidence 9999 99999998766 5689999999999999999988777 468888764
No 16
>PLN02654 acetate-CoA ligase
Probab=99.97 E-value=1.2e-29 Score=221.47 Aligned_cols=202 Identities=12% Similarity=0.033 Sum_probs=170.9
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC--CCCCCCCcee
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL--VDQYDLSSLT 73 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr 73 (207)
+++.|++|++|.. .++.+|+.|+++++++. +++..+|+.|+++++|++..+|++++.|++... ....++++||
T Consensus 321 ~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr 400 (666)
T PLN02654 321 WCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLR 400 (666)
T ss_pred EEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhhee
Confidence 3567999999976 47889999999999873 489999999999999999999999999988653 2346788999
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCCC---CCc
Q psy9665 74 NIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHTM---GSQ 147 (207)
Q Consensus 74 ~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~---g~~ 147 (207)
.++++|+++++++++++.+.+|...+.+.+.||+||+++..+.... ...++++|+|+++++++|+|++|++ ++.
T Consensus 401 ~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~ 480 (666)
T PLN02654 401 VLGSVGEPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECS 480 (666)
T ss_pred EEEEecCCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCCc
Confidence 9999999999999999999998432359999999999877654432 3567899999999999999998873 567
Q ss_pred ceEEEEc--CeeeecccccCCCcC-----------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 148 DSFVISG--DEIQFAPYCRKMSLG-----------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 148 Gel~i~g--~~~~~~gy~~~~~~~-----------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|||+|++ |.+ +.|||++++.+ +.|||+.+++.+|.++++||.+++. +.+|.||+.
T Consensus 481 Gel~v~~~~p~~-~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I--~~~G~ri~p 548 (666)
T PLN02654 481 GYLCVKKSWPGA-FRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVI--NVSGHRIGT 548 (666)
T ss_pred eEEEEcCCCchh-hhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeE--EeCCEEECH
Confidence 9999998 677 99999998643 2489999999999999999988877 678998874
No 17
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=99.97 E-value=1.8e-29 Score=219.65 Aligned_cols=198 Identities=16% Similarity=0.212 Sum_probs=166.5
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCC--CC----HHHHHHHHHhcCceEeeccHHHHHHHHhCCC-----CCCCCCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPH--FD----GHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL-----VDQYDLS 70 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~--~~----~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~~~~~l~ 70 (207)
++.|++|+++...++.++..|+++++.+. +. +..+|+.++++++|+++++|++++.|++... ....+++
T Consensus 301 ~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~ 380 (647)
T PTZ00237 301 SHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLS 380 (647)
T ss_pred EcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcc
Confidence 45788888766678889999999999763 22 7889999999999999999999999987532 1345789
Q ss_pred ceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CC
Q psy9665 71 SLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MG 145 (207)
Q Consensus 71 ~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g 145 (207)
+||.++++|+++++++++++++.++.. +++.||+||++..++.... ....+++|+|+|+++++|+|++|+ +|
T Consensus 381 ~Lr~i~~~G~~l~~~~~~~~~~~~g~~---i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~g 457 (647)
T PTZ00237 381 NLKEIWCGGEVIEESIPEYIENKLKIK---SSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVN 457 (647)
T ss_pred hheEEEecCccCCHHHHHHHHHhcCCC---EEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCC
Confidence 999999999999999999999999865 9999999999866544322 334578999999999999999887 48
Q ss_pred CcceEEEEcC---eeeecccccCCCcC----------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 146 SQDSFVISGD---EIQFAPYCRKMSLG----------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 146 ~~Gel~i~g~---~~~~~gy~~~~~~~----------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||++++| .+ +.|||++++.+ +.|||+.+++.+|.++++||.+++. +.+|.||+.
T Consensus 458 e~GEl~v~~p~~p~~-~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i--~~~G~rI~p 527 (647)
T PTZ00237 458 EIGEVAFKLPMPPSF-ATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQI--KISGNKVQL 527 (647)
T ss_pred CceEEEEeccCCchh-hCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEE--EECCEEeCH
Confidence 8999999986 66 89999998543 3489999999999999999988887 678999875
No 18
>PRK06839 acyl-CoA synthetase; Validated
Probab=99.97 E-value=3.9e-29 Score=210.96 Aligned_cols=198 Identities=22% Similarity=0.330 Sum_probs=171.3
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++.+|++|.+|+.. ++.++..|+++++.+.++++.+++.++++++|++.++|++++.+.+.......+++++|.+++||
T Consensus 194 l~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG 273 (496)
T PRK06839 194 IVLLPLFHIGGIGLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGG 273 (496)
T ss_pred EEeeCCcchhhHHHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECC
Confidence 35689999999874 67889999999998899999999999999999999999999999988765566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVIS 153 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~ 153 (207)
+++++++++++++. +.+ +.+.||+||++..+..... ....+++|+|+++++++|+|++++ +|+.|||+|+
T Consensus 274 ~~~~~~~~~~~~~~-g~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~Gel~v~ 349 (496)
T PRK06839 274 APCPEELMREFIDR-GFL---FGQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEVGELLIR 349 (496)
T ss_pred CCCCHHHHHHHHHh-CCe---eEeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCceEEEEE
Confidence 99999999999987 765 9999999999876544332 456789999999999999999887 4889999999
Q ss_pred cCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.|||++++.+ +.+||.++++++|.+++.||.++... .+|.||+.
T Consensus 350 ~~~~-~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~--~~G~~v~p 406 (496)
T PRK06839 350 GPNV-MKEYWNRPDATEETIQDGWLCTGDLARVDEDGFVYIVGRKKEMII--SGGENIYP 406 (496)
T ss_pred CCCc-chhhcCChHHHHHHHcCCCeeecceEEEcCCCcEEEeccccceEE--ECCEEECH
Confidence 9999 99999998654 35999999998999999999777774 47777764
No 19
>PLN02246 4-coumarate--CoA ligase
Probab=99.97 E-value=5.8e-29 Score=212.21 Aligned_cols=199 Identities=27% Similarity=0.433 Sum_probs=170.5
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|++++.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.+.....+++++|.+++||+
T Consensus 229 ~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 308 (537)
T PLN02246 229 CVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAA 308 (537)
T ss_pred EeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecC
Confidence 5679999999874 778899999999999999999999999999999999999999998876655567889999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccccCCceEEEEeC-CCC---CCCcceE
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKVMPSMKMKVLVK-SHT---MGSQDSF 150 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~-~~~---~g~~Gel 150 (207)
++++++.++++++++.. .+++.||+||++.++..... ...++++|+|+++++++++|+ ++. +|+.|||
T Consensus 309 ~l~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~Gel 386 (537)
T PLN02246 309 PLGKELEDAFRAKLPNA--VLGQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQPGEI 386 (537)
T ss_pred cCCHHHHHHHHHHcCCC--eEeccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCceEE
Confidence 99999999999999765 69999999999876543321 345678999999999999995 444 4889999
Q ss_pred EEEcCeeeecccccCCCcCc---------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 151 VISGDEIQFAPYCRKMSLGA---------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 151 ~i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+++|+.+ +.|||++++.+. .+||+.+++++|.+++.||.++.. +++|.||++
T Consensus 387 ~v~g~~~-~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i--~~~G~~i~~ 447 (537)
T PLN02246 387 CIRGPQI-MKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELI--KYKGFQVAP 447 (537)
T ss_pred EEECCch-hccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceE--EECCEEECc
Confidence 9999999 999999886542 388899999999999999988777 457888875
No 20
>PRK13382 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=6.6e-29 Score=211.99 Aligned_cols=198 Identities=18% Similarity=0.254 Sum_probs=169.6
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~~~~~G 79 (207)
..+|++|++|+..++.++..|+++++.+.++++.+++.++++++|++.++|+++..+.+.... ...+++++|.+++||
T Consensus 242 ~~~p~~~~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG 321 (537)
T PRK13382 242 IVAPMFHAWGFSQLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASG 321 (537)
T ss_pred EecChHhhhHHHHHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcC
Confidence 467999999987788899999999999899999999999999999999999999999876432 234567899999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCCC---CCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHTM---GSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~---g~~Gel~i~g 154 (207)
++++++++++|.+.++.. +++.||+||++..+...+. ....+++|+|+++++++++|+++++ |+.|||+++|
T Consensus 322 ~~l~~~~~~~~~~~~~~~---i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~GEl~v~g 398 (537)
T PRK13382 322 SRMRPDVVIAFMDQFGDV---IYNNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEVGTIFVRN 398 (537)
T ss_pred CCCCHHHHHHHHHHcCCc---EEecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCeeEEEEEc
Confidence 999999999999999875 9999999999877665433 4466799999999999999998874 8899999999
Q ss_pred CeeeecccccCC-----CcCcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKM-----SLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~-----~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.||+... +.-+.|||..+++++|.+++.||-+++.+ .+|+||++
T Consensus 399 ~~~-~~gY~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~dd~ik--~~G~~v~~ 451 (537)
T PRK13382 399 DTQ-FDGYTSGSTKDFHDGFMASGDVGYLDENGRLFVVGRDDEMIV--SGGENVYP 451 (537)
T ss_pred CCc-ccCccccchhhccCCCEeeCceEEEeCCCcEEEeccccceeE--ECCEEECH
Confidence 999 99997221 12235899999999999999999888885 57888875
No 21
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=99.96 E-value=6.2e-29 Score=213.50 Aligned_cols=198 Identities=15% Similarity=0.145 Sum_probs=169.6
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC--CCCCCCCceeEEEE
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL--VDQYDLSSLTNIRC 77 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~~~~ 77 (207)
+..|++|.+|+. .++.++..|+++++.+ .+++..+++.++++++|+++++|++++.|.+... ....+++++|.+++
T Consensus 251 ~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~ 330 (570)
T PRK04319 251 CTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILS 330 (570)
T ss_pred ecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEE
Confidence 467888988876 5888999999999986 6899999999999999999999999999987643 23456789999999
Q ss_pred ccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEE
Q psy9665 78 GAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVI 152 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i 152 (207)
+|+++++++.+++++.++.. +++.||+||++..+..... ...++++|+|+|+++++|+|+++. +|+.|||++
T Consensus 331 gG~~l~~~~~~~~~~~~g~~---i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~Gel~i 407 (570)
T PRK04319 331 VGEPLNPEVVRWGMKVFGLP---IHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRMGNLAI 407 (570)
T ss_pred cccCCCHHHHHHHHHHhCCC---eEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCceEEEE
Confidence 99999999999999998865 9999999999877654433 446788999999999999998887 489999999
Q ss_pred Ec--CeeeecccccCCCcCc--------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 153 SG--DEIQFAPYCRKMSLGA--------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 153 ~g--~~~~~~gy~~~~~~~~--------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++ +.+ +.|||++++.+. .+||..+++.+|.+.++||.+++. +.+|+||+.
T Consensus 408 ~~~~~~~-~~GY~~~~~~~~~~~~~gw~~TGDl~~~~~~g~l~~~GR~~d~i--~~~G~~i~p 467 (570)
T PRK04319 408 KKGWPSM-MRGIWNNPEKYESYFAGDWYVSGDSAYMDEDGYFWFQGRVDDVI--KTSGERVGP 467 (570)
T ss_pred cCCCChH-HhHhcCCHHHhhhhhcCCceEeCcEEEECCCeeEEEEecCCCEE--EECCEEECH
Confidence 97 788 999999986542 488888998999999999988877 457888875
No 22
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=99.96 E-value=8.3e-29 Score=211.30 Aligned_cols=199 Identities=19% Similarity=0.264 Sum_probs=171.1
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++++|++|.+|+. .++.+++.|+++++.+.+++..+++.+++++++++.++|+++..+.+.......+++++|.++++|
T Consensus 240 l~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG 319 (538)
T TIGR03208 240 LMASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAG 319 (538)
T ss_pred EEeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcC
Confidence 3578999999986 488889999999999899999999999999999999999999998775443345678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVIS 153 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~ 153 (207)
+++++++++++.+.++.. +++.||+||++.+....+. .....++|+|+++++++++|+++. +|+.|||+|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~Gel~v~ 396 (538)
T TIGR03208 320 APIPGILVERAWELLGAL---IVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGETGRLLVR 396 (538)
T ss_pred CCCCHHHHHHHHHHcCCe---EEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCCcEEEEe
Confidence 999999999999998865 9999999999877655443 223457899999999999998876 4889999999
Q ss_pred cCeeeecccccCCCcC-------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG-------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~-------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.||+++++.+ +.|||+.+++.++.+.++||.++.. +.+|+||+.
T Consensus 397 g~~~-~~gy~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i--~~~G~~v~p 452 (538)
T TIGR03208 397 GCSN-FGGYLKRPHLNSTDAEGWFDTGDLAFQDAEGYIRINGRSKDVI--IRGGENIPV 452 (538)
T ss_pred cCcc-cccccCCcccccccCCCceeccceEEECCCCcEEEEeccCceE--EECCEEECH
Confidence 9999 99999998665 4589999999999999999988777 468888764
No 23
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=8.6e-29 Score=214.73 Aligned_cols=201 Identities=13% Similarity=0.059 Sum_probs=169.5
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeE
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTN 74 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~ 74 (207)
++.|++|+++.. .++.++..|+++++.+. +++..+++.++++++|++..+|++++.|.+.... ...+++++|.
T Consensus 283 ~~~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~ 362 (625)
T TIGR02188 283 CTADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRL 362 (625)
T ss_pred ECCCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeE
Confidence 567899998876 48889999999999862 4899999999999999999999999999886532 3456889999
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC----CCCc
Q psy9665 75 IRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT----MGSQ 147 (207)
Q Consensus 75 ~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~----~g~~ 147 (207)
++++|+++++++++++.+.++...+.+++.||+||++..++.... ...++++|+|+++++++++|++|+ +|+.
T Consensus 363 i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~ 442 (625)
T TIGR02188 363 LGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEG 442 (625)
T ss_pred EEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCe
Confidence 999999999999999999987433369999999999877654422 356788999999999999998886 4789
Q ss_pred ceEEEEc--CeeeecccccCCCcC-----------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 148 DSFVISG--DEIQFAPYCRKMSLG-----------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 148 Gel~i~g--~~~~~~gy~~~~~~~-----------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|||+|++ |.+ +.|||++++.+ +.|||+.+++++|.++++||.+++. +++|.||+.
T Consensus 443 GeL~v~~p~p~~-~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i--~~~G~ri~p 510 (625)
T TIGR02188 443 GYLVIKQPWPGM-LRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVI--NVSGHRLGT 510 (625)
T ss_pred EEEEEccCCCcc-cccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEE--EeCCEEECH
Confidence 9999999 577 99999998532 3589999999999999999988877 668888864
No 24
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=8.5e-29 Score=211.40 Aligned_cols=199 Identities=23% Similarity=0.316 Sum_probs=171.9
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++++|++|.+|+. .++.++..|+++++.+.+++..+++.++++++|++.++|+++..+...+.....+++++|.+++||
T Consensus 235 l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG 314 (546)
T PRK08314 235 LAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGG 314 (546)
T ss_pred EEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeecc
Confidence 3578999999987 478899999999999999999999999999999999999999999877655566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCC-CC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKS-HT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~-~~---~g~~Gel~i~g 154 (207)
+++++++++++.+.++.. +++.||+||++......+. .....++|+|+++++++++|++ ++ +++.|||+|+|
T Consensus 315 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~Gel~v~g 391 (546)
T PRK08314 315 AAMPEAVAERLKELTGLD---YVEGYGLTETMAQTHSNPPDRPKLQCLGIPTFGVDARVIDPETLEELPPGEVGEIVVHG 391 (546)
T ss_pred ccCCHHHHHHHHHHcCCc---EEecccccccccceecCCCcCCCCCccCcccCCeEEEEEeCCCCcCCCCCCceEEEEEC
Confidence 999999999999999865 9999999999877666544 4456789999999999999964 44 48899999999
Q ss_pred CeeeecccccCCCcC------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.||+++++.+ +.|||..+++.++.+++.||-++.. ..+|.||++
T Consensus 392 ~~~-~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i--~~~G~~v~~ 451 (546)
T PRK08314 392 PQV-FKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMI--NASGFKVWP 451 (546)
T ss_pred Cch-hccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhE--EeCCEEECH
Confidence 999 99999987532 3589999999999999999987777 457888874
No 25
>PRK06145 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1e-28 Score=208.61 Aligned_cols=199 Identities=17% Similarity=0.191 Sum_probs=172.7
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
.++|++|.+++.. .+.++..|+++++.+.+++..+++.++++++|++.++|+++..++........+++++|.+++||+
T Consensus 195 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~ 274 (497)
T PRK06145 195 VVGPLYHVGAFDLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGE 274 (497)
T ss_pred EecCchhHhHHHHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCC
Confidence 5689999999864 677899999999999999999999999999999999999999998876655667889999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
++++++++++.+.|+.. ++++.||+||++...+.... ....+++|+|+++++++++|+++. +++.|||+++|
T Consensus 275 ~~~~~~~~~~~~~~~~~--~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g 352 (497)
T PRK06145 275 KTPESRIRDFTRVFTRA--RYIDAYGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMKGEICMRG 352 (497)
T ss_pred CCCHHHHHHHHHHcCCC--ceEEeecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCceEEEEEC
Confidence 99999999999999766 69999999999876554332 235678999999999999998876 48899999999
Q ss_pred CeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.|||++++.+ +.|||..+++.+|.+.++||.++..+ .+|.|+++
T Consensus 353 ~~~-~~Gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~--~~G~~v~~ 408 (497)
T PRK06145 353 PKV-TKGYWKDPEKTAEAFYGDWFRSGDVGYLDEEGFLYLTDRKKDMII--SGGENIAS 408 (497)
T ss_pred cch-hhhhcCChHHHHHHHhCCCeeccceEEEcCCCcEEEeccccceEE--eCCeEECH
Confidence 999 99999988654 45999999999999999999888774 57888764
No 26
>PRK07529 AMP-binding domain protein; Validated
Probab=99.96 E-value=1.6e-28 Score=213.29 Aligned_cols=198 Identities=23% Similarity=0.378 Sum_probs=167.0
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeCC--C-C---HHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCcee
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLPH--F-D---GHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLT 73 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~--~-~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr 73 (207)
++.+|++|++++. .++.++..|+++++.++ + + ...+++.++++++|++.++|+++..|++.+. ...+++++|
T Consensus 258 l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr 336 (632)
T PRK07529 258 FCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLR 336 (632)
T ss_pred EEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceE
Confidence 3678999999987 48889999999999863 3 2 3678999999999999999999999988753 235688999
Q ss_pred EEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEE--eCCC---C---
Q psy9665 74 NIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVL--VKSH---T--- 143 (207)
Q Consensus 74 ~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~--d~~~---~--- 143 (207)
.+++||+++++++.+++++.++.. +++.||+||++.++...+. ....+++|+|+|+++++++ |+++ .
T Consensus 337 ~v~~gg~~l~~~l~~~~~~~~g~~---l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~ 413 (632)
T PRK07529 337 YALCGAAPLPVEVFRRFEAATGVR---IVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCA 413 (632)
T ss_pred EEEEcCCCCCHHHHHHHHHHhCCc---EeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCC
Confidence 999999999999999999999865 9999999999877666544 4477899999999999985 5655 3
Q ss_pred CCCcceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 144 MGSQDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 144 ~g~~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+.|||+|+|+.+ +.||+++++.. +.|||..+++.+|.+++.||.++..+ .+|.||+.
T Consensus 414 ~g~~Gel~v~gp~v-~~GY~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~--~~G~~i~p 480 (632)
T PRK07529 414 VDEVGVLCIAGPNV-FSGYLEAAHNKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLII--RGGHNIDP 480 (632)
T ss_pred CCCceEEEEECCCc-cccccCCccccccccCCCceEcCcEEEEcCCceEEEEecccCEEE--eCCEEECH
Confidence 48899999999999 99999876322 24899999999999999999888775 58888874
No 27
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.96 E-value=1.3e-28 Score=225.93 Aligned_cols=198 Identities=20% Similarity=0.315 Sum_probs=171.3
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+|+.. ++.++..|+++++.+ .++++.+++.++++++|++.++|++++.+.+.+...+.+++++|.+++||
T Consensus 828 ~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg 907 (1146)
T PRK08633 828 SSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGA 907 (1146)
T ss_pred EcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcC
Confidence 5789999999985 888999999999987 57999999999999999999999999999887665667789999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-----------CCCCCccccccCCceEEEEeCC-CC---C
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-----------DVPSSSVGKVMPSMKMKVLVKS-HT---M 144 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-----------~~~~~~~G~~~~~~~~~i~d~~-~~---~ 144 (207)
+++++++.+++++.++.+ +++.||+||++..+..... ..+.+++|+|+|+++++++|++ ++ +
T Consensus 908 ~~~~~~~~~~~~~~~g~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~ 984 (1146)
T PRK08633 908 EKLKPEVADAFEEKFGIR---ILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPP 984 (1146)
T ss_pred CcCCHHHHHHHHHHhCCC---eecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCC
Confidence 999999999999999865 9999999999877654322 1246789999999999999965 44 4
Q ss_pred CCcceEEEEcCeeeecccccCCCcC------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 145 GSQDSFVISGDEIQFAPYCRKMSLG------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 145 g~~Gel~i~g~~~~~~gy~~~~~~~------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.|||+++|+.+ +.|||++|+.+ +.|||..+++++|.+++.||.++.. +.+|+||+.
T Consensus 985 g~~Gel~v~g~~~-~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i--~~~G~~v~~ 1054 (1146)
T PRK08633 985 GEDGLILIGGPQV-MKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFA--KIGGEMVPL 1054 (1146)
T ss_pred CCceEEEEcCCCc-cccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchh--hhCcEEECH
Confidence 8999999999999 99999998653 2488999999999999999988776 568888864
No 28
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=1.7e-28 Score=210.43 Aligned_cols=198 Identities=17% Similarity=0.267 Sum_probs=169.6
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+++. .++..+..|++.++.+ .+++..+++.++++++|+++++|+++..+.+.......+++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 568999999987 4667788888877766 57899999999999999999999999999876554455678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEcC
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGD 155 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~ 155 (207)
+++++++++++.+.++.. +++.||+||++.++...+. ...++++|+|+++++++++|+++. +|+.|||+|+|+
T Consensus 336 ~~~~~~~~~~~~~~~~~~---v~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~Gel~v~g~ 412 (562)
T PRK05677 336 MALQLATAERWKEVTGCA---ICEGYGMTETSPVVSVNPSQAIQVGTIGIPVPSTLCKVIDDDGNELPLGEVGELCVKGP 412 (562)
T ss_pred ccCCHHHHHHHHHHcCCC---eeccCCccccCcceeecCccCCCCCccCccCCCCEEEEECCCCCCCCCCCCeEEEEecC
Confidence 999999999999988865 9999999999877765544 445678999999999999999887 488999999999
Q ss_pred eeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 156 EIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 156 ~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+ +.|||++++.+ +.+||..+++.+|.+.+.||.++.. +++|+||++
T Consensus 413 ~~-~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i--~~~G~~i~p 468 (562)
T PRK05677 413 QV-MKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMI--LVSGFNVYP 468 (562)
T ss_pred cc-chhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeE--EeCCEEECH
Confidence 99 99999998654 3488999999999999999988777 446888874
No 29
>PRK06060 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1.3e-28 Score=216.26 Aligned_cols=197 Identities=14% Similarity=0.169 Sum_probs=169.1
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+..|++|.+++. .++.++..|+++++.+ .+++..+++.++++++|+++++|+++..+.+... ..+++++|.+++||
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gG 269 (705)
T PRK06060 192 CSARMYFAYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAG 269 (705)
T ss_pred EeccchhhcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEec
Confidence 467899998875 5788899999999987 5789999999999999999999999999987643 33578999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEcC
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGD 155 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~ 155 (207)
+++++++++++.+.++.. ++++.||+||++..+..... ....+++|+|+++++++|+|++++ +|+.|||+|+|+
T Consensus 270 e~l~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~GEl~i~g~ 347 (705)
T PRK06060 270 EALELGLAERLMEFFGGI--PILDGIGSTEVGQTFVSNRVDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVEGDLWVRGP 347 (705)
T ss_pred CcCCHHHHHHHHHHcCCC--ceEeeeeccccCceEEeccCCCCCcCcccccCCCcEEEEECCCCCCCCCCCceEEEEccc
Confidence 999999999999999754 59999999999866554433 445678999999999999999887 488999999999
Q ss_pred eeeecccccCCCcC------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 156 EIQFAPYCRKMSLG------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 156 ~~~~~gy~~~~~~~------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+ +.|||++|+.+ +.|||..+++.+|.+.+.||.++..+ ++|.||++
T Consensus 348 ~v-~~GY~~~~~~~~~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik--~~G~~v~~ 400 (705)
T PRK06060 348 AI-AKGYWNRPDSPVANEGWLDTRDRVCIDSDGWVTYRCRADDTEV--IGGVNVDP 400 (705)
T ss_pred hh-hhhhhCCCcccccCCCcEECCeeEEECCCceEEEecccCceEE--ECCEEECH
Confidence 99 99999998654 35899999999999999999887774 58888875
No 30
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=99.96 E-value=2.9e-28 Score=206.51 Aligned_cols=199 Identities=20% Similarity=0.247 Sum_probs=170.7
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
++++|++|.+++..++.++..|+++++.+.++++.+++.++++++|++.++|+++..|.+... ...+++++|.++++|+
T Consensus 206 l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~ 284 (515)
T TIGR03098 206 LAVLPLSFDYGFNQLTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGG 284 (515)
T ss_pred EEECchhhHhHHHHHHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCC
Confidence 357899999999888999999999999989999999999999999999999999999987532 2246789999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEcC
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGD 155 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~ 155 (207)
++++++++++++.++.. .+++.||+||++......+. ....+++|+|+++++++|+|+++. +++.|||+++|+
T Consensus 285 ~l~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~Gel~v~g~ 362 (515)
T TIGR03098 285 AMPRATLSRLRSFLPNA--RLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEEGELVHRGA 362 (515)
T ss_pred cCCHHHHHHHHHHCCCC--eEeeeeccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCceEEEEcCc
Confidence 99999999999998655 59999999999876554433 456789999999999999998876 388999999999
Q ss_pred eeeecccccCCCcC--------------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 156 EIQFAPYCRKMSLG--------------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 156 ~~~~~gy~~~~~~~--------------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+ +.|||++++.+ ..|||..+++.++.+.+.||-++... .+|.|++.
T Consensus 363 ~~-~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~--~~G~~v~~ 429 (515)
T TIGR03098 363 LV-AMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIK--TSGYRVSP 429 (515)
T ss_pred hh-hccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEecccccee--cCCEEeCH
Confidence 99 99999987543 24789999988999999999877774 57888874
No 31
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=2.9e-28 Score=206.32 Aligned_cols=199 Identities=23% Similarity=0.357 Sum_probs=172.7
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|.+++.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.......+++++|.++++|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~ 291 (513)
T PRK07656 212 AANPFFHVFGYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAA 291 (513)
T ss_pred EccchHHHHHHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCC
Confidence 5789999999874 888999999999988899999999999999999999999999999887665667889999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CC--CCCccccccCCceEEEEeCCCC---CCCcceEEEE
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DV--PSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVIS 153 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~--~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~ 153 (207)
++++++++++++.++.. .+++.||+||+++++..... .. ...++|+|+++++++++|+++. +|+.|||+++
T Consensus 292 ~~~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 369 (513)
T PRK07656 292 SMPVALLERFESELGVD--IVLTGYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEVGELLVR 369 (513)
T ss_pred CCCHHHHHHHHHHcCCC--ceEeEEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCceEEEEE
Confidence 99999999999999984 49999999999877766554 22 2678999999999999998887 3789999999
Q ss_pred cCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++.+ +.||++++..+ +.+||..+++++|.+.++||-++..+ .+|.++++
T Consensus 370 ~~~~-~~gy~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~--~~G~~v~~ 427 (513)
T PRK07656 370 GPNV-MKGYYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFI--VGGFNVYP 427 (513)
T ss_pred cchh-hhhhcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEE--eCCEEeCH
Confidence 9999 99999987433 45889999988999999999877764 47777754
No 32
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=99.96 E-value=2.8e-28 Score=211.94 Aligned_cols=201 Identities=14% Similarity=0.114 Sum_probs=169.0
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeE
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTN 74 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~ 74 (207)
++.|++|+.++. .++.+++.|+++++.+. +++..+++.++++++|++..+|++++.|++.... ...++++||.
T Consensus 292 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~ 371 (637)
T PRK00174 292 CTADVGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRL 371 (637)
T ss_pred EcCCchHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeE
Confidence 567999999876 58889999999999762 4899999999999999999999999999876532 2356789999
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcc
Q psy9665 75 IRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQD 148 (207)
Q Consensus 75 ~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~G 148 (207)
++++|+++++++++++.+.++...+.+++.||+||++...+.... ....+++|+|+++++++|+|++|+ +|+.|
T Consensus 372 i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~G 451 (637)
T PRK00174 372 LGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEGG 451 (637)
T ss_pred EEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCcE
Confidence 999999999999999999987432359999999999876654332 345678999999999999999887 38899
Q ss_pred eEEEEc--CeeeecccccCCCcC-----------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 149 SFVISG--DEIQFAPYCRKMSLG-----------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 149 el~i~g--~~~~~~gy~~~~~~~-----------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
||+|+| |.+ +.|||++++.+ +.|||..+++.+|.++++||.+++. +++|.||+.
T Consensus 452 el~v~g~~p~~-~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~i--k~~G~~v~p 518 (637)
T PRK00174 452 NLVIKDPWPGM-MRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVL--NVSGHRLGT 518 (637)
T ss_pred EEEEcCCCCcc-cccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEE--EeCCEEECH
Confidence 999999 578 99999988532 3489999999999999999988887 668888864
No 33
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=99.96 E-value=2.9e-28 Score=211.58 Aligned_cols=198 Identities=17% Similarity=0.151 Sum_probs=166.1
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC----CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC--CCCCCCCceeE
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP----HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL--VDQYDLSSLTN 74 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~ 74 (207)
++.|++|++|+. .++.+++.|+++++.+ .+++..+++.++++++|+++.+|++++.|.+... ....++++||.
T Consensus 279 ~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~ 358 (628)
T TIGR02316 279 SASDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHW 358 (628)
T ss_pred EcCCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeE
Confidence 567899999875 5888999999999987 3479999999999999999999999999987653 23467899999
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-----CCCCCccccccCCceEEEEeC-CCC---CC
Q psy9665 75 IRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-----DVPSSSVGKVMPSMKMKVLVK-SHT---MG 145 (207)
Q Consensus 75 ~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-----~~~~~~~G~~~~~~~~~i~d~-~~~---~g 145 (207)
++++|+++++++++++++.++.. +++.||+||++..++.... ....+++|+|+++++++|+|+ +|+ ++
T Consensus 359 ~~~gGe~l~~~~~~~~~~~~~~~---~~~~yG~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g 435 (628)
T TIGR02316 359 LFLAGEPLDEPTAHWITDGLGKP---VIDNYWQTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPN 435 (628)
T ss_pred EEEecCCCCHHHHHHHHHHhCCC---EEecccccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCC
Confidence 99999999999999999998865 9999999999865443222 235578999999999999998 566 48
Q ss_pred CcceEEEEcC---eeeecccccCCCcC------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 146 SQDSFVISGD---EIQFAPYCRKMSLG------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 146 ~~Gel~i~g~---~~~~~gy~~~~~~~------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||+|+|| .+ +.+||++++.. +.+||+.+++.+|.++++||.+++. +.+|.||+.
T Consensus 436 ~~Gel~v~gp~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~i--k~~G~rv~~ 507 (628)
T TIGR02316 436 EKGVLTVVPPLPPGC-LSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVI--NVAGHRLGT 507 (628)
T ss_pred CcEEEEEecCCCccc-cccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceE--EeCCEEeCH
Confidence 8999999998 45 78999887431 3589999999999999999988887 668888874
No 34
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=99.96 E-value=3.3e-28 Score=214.04 Aligned_cols=196 Identities=20% Similarity=0.381 Sum_probs=166.1
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeCC-CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLPH-FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
++.+|++|.+|+.. ++.++..|+++++.+. +++..+++.++++++|+++++|+++..+.+.. ...++++||.+++|
T Consensus 410 l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~g 487 (718)
T PRK08043 410 MSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAG 487 (718)
T ss_pred EEcCcchhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEe
Confidence 46789999999874 7889999999999874 67888999999999999999999998886642 23567899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCee
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEI 157 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~ 157 (207)
|+++++++.+.+++.++.. +++.||+||++........ ....+++|+|+|+++++++|+++. ++.|||+++|+++
T Consensus 488 g~~l~~~~~~~~~~~~g~~---l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~~~i~d~~~~-~~~Gel~v~g~~v 563 (718)
T PRK08043 488 AEKLQESTKQLWQDKFGLR---ILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGI-EQGGRLQLKGPNI 563 (718)
T ss_pred CccCCHHHHHHHHHHcCCC---eecccCcccccceEEecCCcccCCCCCCCcCCCCeeEEecCCCC-CCceEEEEecCCc
Confidence 9999999999999999865 9999999999877665544 556789999999999999998754 5669999999999
Q ss_pred eeccccc--CCCc-------C---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 158 QFAPYCR--KMSL-------G---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 158 ~~~gy~~--~~~~-------~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||+ +++. + +.|||..+++++|.+++.||.++.. ..+|+||+.
T Consensus 564 -~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I--~~~G~~V~p 626 (718)
T PRK08043 564 -MNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFA--KIAGEMVSL 626 (718)
T ss_pred -cccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCee--EeCcEEcCH
Confidence 999998 3331 1 2388889999999999999988887 457899875
No 35
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.96 E-value=2.1e-29 Score=198.56 Aligned_cols=198 Identities=22% Similarity=0.287 Sum_probs=176.9
Q ss_pred CcccccchHHHHHH--HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLLL--MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~~--~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
|+.+|..|-+-+.+ .+..++.|+|+|+.++.+|+..+.+|+++++|+...+|.....|++..+..+.+++|||.+..|
T Consensus 234 L~~LP~AHNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVG 313 (542)
T COG1021 234 LCALPAAHNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVG 313 (542)
T ss_pred EEecccccCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeec
Confidence 57899999998875 8999999999999999999999999999999999999999999999988888999999999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCcccccc-CCceEEEEeCCCC---CCCcceEEE
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVM-PSMKMKVLVKSHT---MGSQDSFVI 152 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~-~~~~~~i~d~~~~---~g~~Gel~i 152 (207)
|+.+++++.++....+++. +.+.|||.|.-...+.-.+ +.-..+.|+|+ |.-+++|+|++|+ |||+|+|..
T Consensus 314 Garl~~~~Arrv~~~lgC~---LQQVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~G~Llt 390 (542)
T COG1021 314 GARLSATLARRVPAVLGCQ---LQQVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEVGELLT 390 (542)
T ss_pred CcccCHHHHhhchhhhCch---HHHHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCcceeee
Confidence 9999999999999999987 9999999997666555444 44556789999 7779999999998 599999999
Q ss_pred EcCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCccc
Q psy9665 153 SGDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 153 ~g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
|||-. ++|||+.|+-. +++||..+.+.+|++.+.||-++.+ |-|||||-
T Consensus 391 RGPYT-irGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQI--NRgGEKIA 448 (542)
T COG1021 391 RGPYT-IRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQI--NRGGEKIA 448 (542)
T ss_pred cCCee-eeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhh--ccccchhh
Confidence 99999 99999988433 2489999999999999999877766 88999984
No 36
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.96 E-value=4.6e-28 Score=207.80 Aligned_cols=198 Identities=19% Similarity=0.278 Sum_probs=169.5
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|++++.. ++..+..|++.++.. ++++..+++.++++++|++.++|+++..+.+.+.....+++++|.+++||
T Consensus 263 ~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG 342 (562)
T PRK12492 263 APLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLTNSGG 342 (562)
T ss_pred EecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEEEecc
Confidence 4689999999874 667788888877765 57899999999999999999999999999887765566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++++.++|.+.++.+ +++.||+||++.++...+. ....+++|+|+++++++|+|+++. +|+.|||+++|
T Consensus 343 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~~Gel~v~g 419 (562)
T PRK12492 343 TALVKATAERWEQLTGCT---IVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLGERGELCIKG 419 (562)
T ss_pred ccCCHHHHHHHHHHhCCc---eeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCCCceEEEEeC
Confidence 999999999999988865 9999999999887765543 345578999999999999999887 48899999999
Q ss_pred CeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.|||++++.+ +.+||..+++.+|.+.+.||.++..+ .+|+||++
T Consensus 420 ~~~-~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~--~~G~~i~~ 476 (562)
T PRK12492 420 PQV-MKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLII--VSGFNVYP 476 (562)
T ss_pred Ccc-ccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEE--ECCEEECH
Confidence 999 99999988643 34899999999999999999888774 46888764
No 37
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=99.96 E-value=5.2e-28 Score=205.95 Aligned_cols=198 Identities=23% Similarity=0.344 Sum_probs=168.0
Q ss_pred cccccchHHHHHH--HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL--MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~--~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+++|++|.+++.. ++.++..|+++++.+++++..+++.++++++|++.++|+++..+.+.......+++++|.+++||
T Consensus 229 ~~~P~~h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG 308 (527)
T TIGR02275 229 CALPAAHNYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGG 308 (527)
T ss_pred ECCChHhhhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcC
Confidence 5789999999863 77889999999998889999999999999999999999999999887665566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCcccccc-CCceEEEEeCCCC---CCCcceEEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVM-PSMKMKVLVKSHT---MGSQDSFVIS 153 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~-~~~~~~i~d~~~~---~g~~Gel~i~ 153 (207)
+++++++++++.+.++.. +++.||+||++........ .....++|+|+ ++..++++|++++ +|+.|||+++
T Consensus 309 ~~l~~~~~~~~~~~~g~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~Gei~v~ 385 (527)
T TIGR02275 309 AKFSEAAARRVPAVFGCQ---LQQVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGETGMLLTR 385 (527)
T ss_pred CCCCHHHHHHHHHHhCCe---EEeeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCceEEEec
Confidence 999999999999999865 9999999997544332221 33456889999 5889999999887 4899999999
Q ss_pred cCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.|||++++.+ +.|||.+++++++.+.+.||-++.. ..+|+||++
T Consensus 386 g~~~-~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i--~~~G~~v~~ 443 (527)
T TIGR02275 386 GPYT-FRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQI--NRGGEKIAA 443 (527)
T ss_pred CCcc-chhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEeccccee--ecCCEEECH
Confidence 9999 99999998554 3589999998899999999977766 457877764
No 38
>PRK07638 acyl-CoA synthetase; Validated
Probab=99.96 E-value=9.4e-28 Score=202.43 Aligned_cols=195 Identities=14% Similarity=0.193 Sum_probs=167.4
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~ 81 (207)
...|++|..++..++.+++.|+++++.+.+++..+++.++++++|+++++|+++..|.+... . ..+.+.++++|++
T Consensus 189 ~~~~l~~~~~l~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~ 264 (487)
T PRK07638 189 IAGTLVHSLFLYGAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAK 264 (487)
T ss_pred EeecchHHHHHHHHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCC
Confidence 35689999887778889999999999999999999999999999999999999999988732 1 3456667889999
Q ss_pred CCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEcCe
Q psy9665 82 VGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGDE 156 (207)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~~ 156 (207)
+++++.+++++.++.. ++++.||+||++..+..... .....++|+|+++++++|+|++|. +|+.|||+|+|+.
T Consensus 265 l~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~Gel~v~~~~ 342 (487)
T PRK07638 265 WEAEAKEKIKNIFPYA--KLYEFYGASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEIGTVYVKSPQ 342 (487)
T ss_pred CCHHHHHHHHHHcCCC--eEEEEecCCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCCeEEEEeccc
Confidence 9999999999999765 69999999999977665543 456678999999999999999887 4889999999999
Q ss_pred eeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 157 IQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 157 ~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+ +.|||++++.+ ..+||..+++++|.+++.||.++.. +.+|.||++
T Consensus 343 ~-~~gy~~~~~~~~~~~~~g~~~TGDl~~~d~~g~l~i~GR~~d~i--~~~G~~v~~ 396 (487)
T PRK07638 343 F-FMGYIIGGVLARELNADGWMTVRDVGYEDEEGFIYIVGREKNMI--LFGGINIFP 396 (487)
T ss_pred c-eeeecCCHHHHhhhccCCcEecCccEeEcCCCeEEEEecCCCeE--EeCCEEECH
Confidence 9 99999988432 2489999999999999999988887 458888865
No 39
>PRK13383 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=7.7e-28 Score=204.42 Aligned_cols=198 Identities=18% Similarity=0.254 Sum_probs=169.6
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~~~~~G 79 (207)
..+|++|.+|+..++.++..|+++++.+.++++.+++.+++++++.+.++|+++..+.+.... ...+++++|.+++||
T Consensus 222 ~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG 301 (516)
T PRK13383 222 VAMPMFHGLGLGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSG 301 (516)
T ss_pred EecCCcchhhHHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECC
Confidence 568999999998888889999999998899999999999999999999999999999876432 124578999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
++++++++++|.+.++.. +++.||+||++..+...+. ....+++|+|+|+++++|+|++++ +++.|||+++|
T Consensus 302 ~~l~~~~~~~~~~~~g~~---v~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g 378 (516)
T PRK13383 302 DRLDPTLGQRFMDTYGDI---LYNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVTGRIFVGG 378 (516)
T ss_pred CCCCHHHHHHHHHHcCch---hhhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCceEEEEec
Confidence 999999999999999976 9999999999876654433 445678999999999999998887 38899999999
Q ss_pred CeeeecccccCCCc-----CcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSL-----GAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~-----~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.+|++.+.. -..|||..+++++|.+++.||-++..+ .+|.||+.
T Consensus 379 ~~~-~~~Y~~~~~~~~~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~--~~G~~v~~ 431 (516)
T PRK13383 379 ELA-GTRYTDGGGKAVVDGMTSTGDMGYLDNAGRLFIVGREDDMII--SGGENVYP 431 (516)
T ss_pred Ccc-cccccCCchhheecCceecceeEEEcCCccEEEeccccceEE--ECCEEECH
Confidence 999 9999987632 234899999999999999999887774 58888764
No 40
>PRK08316 acyl-CoA synthetase; Validated
Probab=99.96 E-value=6.5e-28 Score=204.66 Aligned_cols=199 Identities=22% Similarity=0.230 Sum_probs=173.1
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|.+|+.. ++.++..|+++++.+.++++.+++.++++++|++.++|+++..+.+.......+++++|.+++||+
T Consensus 217 ~~~p~~h~~g~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~ 296 (523)
T PRK08316 217 HALPLYHCAQLDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGAS 296 (523)
T ss_pred EccCCchhhhHHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCC
Confidence 5689999999875 666789999999998899999999999999999999999999999887666677889999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
++++++.+.+++.++.. .+++.||+||++.+...... ....+++|+|+++++++|+|++++ +|+.|||+++|
T Consensus 297 ~~~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gei~v~~ 374 (523)
T PRK08316 297 IMPVEVLKELRERLPGL--RFYNCYGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEVGEIVHRS 374 (523)
T ss_pred cCCHHHHHHHHHHcCCC--ceeeeecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCcceEEEEC
Confidence 99999999999998654 59999999999887665433 345678999999999999998887 38899999999
Q ss_pred CeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.||+++++.+ +.+||.++++.++.+.+.||-++..+ .+|.||++
T Consensus 375 ~~~-~~~y~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~i~gR~~~~i~--~~G~~i~~ 430 (523)
T PRK08316 375 PQL-MLGYWDDPEKTAEAFRGGWFHSGDLGVMDEEGYITVVDRKKDMIK--TGGENVAS 430 (523)
T ss_pred Cch-hhhhcCCHHHHHHHhhCCCeeccceEEEcCCceEEEecccccEEE--eCCeEECH
Confidence 999 99999987654 45899999999999999999888875 57888764
No 41
>PRK12583 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=7.8e-28 Score=205.89 Aligned_cols=199 Identities=22% Similarity=0.327 Sum_probs=171.4
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+|+.. ++.++..|+++++.. .+++..+++.++++++|++.++|+++..+.........+++++|.++++|
T Consensus 247 ~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G 326 (558)
T PRK12583 247 VPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAG 326 (558)
T ss_pred EecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecC
Confidence 5689999999874 788899999998765 68999999999999999999999999988877655556789999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC----CCCCCccccccCCceEEEEeCCCC---CCCcceEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL----DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVI 152 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i 152 (207)
+++++++.+++.+.++.. .+.+.||+||++.++..... ..+..++|+|++++.++++|+++. +|+.|||+|
T Consensus 327 ~~~~~~~~~~~~~~~~~~--~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~Gel~v 404 (558)
T PRK12583 327 APCPIEVMRRVMDEMHMA--EVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGEIGELCT 404 (558)
T ss_pred CCCCHHHHHHHHHHcCCc--ceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCCeeEEEE
Confidence 999999999999999876 69999999999987765433 335678999999999999999876 488999999
Q ss_pred EcCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 153 SGDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 153 ~g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+.+ +.||+++++.+ +.+||..++++++.+.+.||.++..+ .+|.||++
T Consensus 405 ~g~~~-~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~--~~G~~v~~ 463 (558)
T PRK12583 405 RGYSV-MKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMII--RGGENIYP 463 (558)
T ss_pred EeCcc-chhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeE--ECCEEeCH
Confidence 99999 99999987543 35899999998999999999887774 57888874
No 42
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=99.96 E-value=1.7e-28 Score=208.00 Aligned_cols=190 Identities=19% Similarity=0.319 Sum_probs=151.8
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhC--------CCCC-------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKS--------PLVD------- 65 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------~~~~------- 65 (207)
+++||+.|++...+. ..+..++.+.+.-..++..+++.+.+.++|+++++|.+|+.+-+. +...
T Consensus 237 LsfLPlaHi~Er~~~-~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a 315 (613)
T COG1022 237 LSFLPLAHIFERAFE-GGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWA 315 (613)
T ss_pred EEeCcHHHHHHHHHH-HHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHH
Confidence 578999999998753 333333444444467999999999999999999999999886541 0000
Q ss_pred --------------------------------CCCC-CceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccc
Q psy9665 66 --------------------------------QYDL-SSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTI 112 (207)
Q Consensus 66 --------------------------------~~~l-~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~ 112 (207)
+..+ .++|.+++||+++++++...++.. +.+ ++++||+|||.+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~---i~eGYGlTEts~ 391 (613)
T COG1022 316 LKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIP---ILEGYGLTETSA 391 (613)
T ss_pred HHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCC---eEEEeccccccc
Confidence 0011 389999999999999999999865 876 999999999999
Q ss_pred eeeccCC-CCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCeeeecccccCCCcCcc---------cCCcEEEcCee
Q psy9665 113 LVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEIQFAPYCRKMSLGAY---------LCHWLKLKGKQ 182 (207)
Q Consensus 113 ~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~~~~gy~~~~~~~~~---------~~d~~~~~~~~ 182 (207)
.++.+++ ....+++|+|+|+++++|+|+ |||+||||.+ |+|||++|+.|.. |||...++.+|
T Consensus 392 ~~~v~~~~~~~~gtvG~p~p~~evKI~d~-------GEilVRG~~V-m~GYyk~pe~Taeaf~~DGWf~TGDlg~~d~~g 463 (613)
T COG1022 392 VVSVNPPDRFVLGTVGKPLPGIEVKIADD-------GEILVRGPNV-MKGYYKNPEATAEAFTEDGWFRTGDLGELDEDG 463 (613)
T ss_pred ceEEccccCcccCCcCCcCCCceEEEccC-------ceEEEecchh-cchhcCChHHHhhhccccCCcccCceeEEcCCC
Confidence 9988877 889999999999999999873 9999999999 9999999987763 66666667789
Q ss_pred EEEEEecCccccccccCCCccc
Q psy9665 183 TVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 183 ~~~i~grg~~~~~~~~~~~~~s 204 (207)
.+.|+||.++..+- -.|+||.
T Consensus 464 ~L~i~gRkK~~i~l-~~GknIa 484 (613)
T COG1022 464 YLVITGRKKELIKL-SNGKNIA 484 (613)
T ss_pred cEEEeecccceEEC-CCCcccC
Confidence 99999997776653 3555554
No 43
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=99.96 E-value=1.7e-28 Score=215.07 Aligned_cols=200 Identities=19% Similarity=0.226 Sum_probs=157.2
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCC------C--HHHHHHHHHhcCceEeeccHHHHHHHHhCCCCC-------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHF------D--GHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVD------- 65 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~------~--~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------- 65 (207)
++++|++|++++.....++..|+++.+..+. + +..+++.++++++|++.++|.+++.+.+.....
T Consensus 296 l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~ 375 (696)
T PLN02387 296 LAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGL 375 (696)
T ss_pred EEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHH
Confidence 4689999999988766677888888765432 1 234567899999999999999999886431000
Q ss_pred --------------------------C-------------CCC-CceeEEEEccCCCCHHHHHHHHHHhCCCcCcceecc
Q psy9665 66 --------------------------Q-------------YDL-SSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGY 105 (207)
Q Consensus 66 --------------------------~-------------~~l-~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~Y 105 (207)
. ..+ +++|.+++||+++++++.+.++..++.. ++++|
T Consensus 376 ~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~---v~~~Y 452 (696)
T PLN02387 376 AKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAP---IGQGY 452 (696)
T ss_pred HHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCC---eeEee
Confidence 0 001 5899999999999999998888888876 99999
Q ss_pred ccccccceeeccCC-CCCCCccccccCCceEEEEe-CCC------CCCCcceEEEEcCeeeecccccCCCcCc-------
Q psy9665 106 GMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLV-KSH------TMGSQDSFVISGDEIQFAPYCRKMSLGA------- 170 (207)
Q Consensus 106 G~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d-~~~------~~g~~Gel~i~g~~~~~~gy~~~~~~~~------- 170 (207)
|+||++..++.... ....+++|+|+|+++++|+| +++ .+++.|||+||||.+ |.|||++|+.+.
T Consensus 453 G~TEt~~~~~~~~~~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrGp~v-~~GY~~~pe~T~~~f~~d~ 531 (696)
T PLN02387 453 GLTETCAGATFSEWDDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGGPSV-TLGYFKNQEKTDEVYKVDE 531 (696)
T ss_pred chhhcccceeecCcccCCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEeccCcc-cchhcCCHHHHhhhhcccc
Confidence 99999876655544 55678999999999999999 444 245679999999999 999999986543
Q ss_pred ------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 171 ------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 171 ------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.|||..+++++|.+.|+||.++..+. -+|+|||.
T Consensus 532 ~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~-~~Ge~I~p 571 (696)
T PLN02387 532 RGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKL-QHGEYVSL 571 (696)
T ss_pred CCCceeecCceEEECCCCcEEEEEcccceEEC-CCCeEEch
Confidence 26777788889999999999888842 15899885
No 44
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=99.96 E-value=9.7e-28 Score=205.11 Aligned_cols=199 Identities=21% Similarity=0.377 Sum_probs=165.9
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCC--ceeEEEEc
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLS--SLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~--~lr~~~~~ 78 (207)
.++|++|.+++. .++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+.+.+.....++. ++|.++++
T Consensus 232 ~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~ 311 (546)
T PLN02330 232 GLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTA 311 (546)
T ss_pred EecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEc
Confidence 467999999987 477889999999999999999999999999999999999999999887654444444 47999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccccCCceEEEEeCC-CC---CCCcc
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKVMPSMKMKVLVKS-HT---MGSQD 148 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~-~~---~g~~G 148 (207)
|+++++++++++++.|+.. ++++.||+||++.+...... .....++|+|+++++++++|++ ++ +|+.|
T Consensus 312 g~~l~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~G 389 (546)
T PLN02330 312 AAPLAPELLTAFEAKFPGV--QVQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTPG 389 (546)
T ss_pred CCcCCHHHHHHHHHHcCCC--eEEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCce
Confidence 9999999999999999544 59999999999765543321 1334689999999999999954 44 48899
Q ss_pred eEEEEcCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 149 SFVISGDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 149 el~i~g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
||+|+|+.+ +.||+++++.+ +.+||+.+++.+|.+++.||.++.. +.+|.||++
T Consensus 390 el~v~g~~~-~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i--~~~G~~v~~ 452 (546)
T PLN02330 390 ELCVRSQCV-MQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELI--KYKGFQVAP 452 (546)
T ss_pred EEEEecchh-hhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhh--hcCCEEECH
Confidence 999999999 99999998654 3488888988899999999987766 556888764
No 45
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=99.96 E-value=3.7e-28 Score=206.87 Aligned_cols=201 Identities=20% Similarity=0.277 Sum_probs=159.1
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeC--CC--CHHHHHHHHHhcCceEeeccHHHHHHHHhCCC-CCCCCCCceeEE
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLP--HF--DGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL-VDQYDLSSLTNI 75 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~--~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~l~~lr~~ 75 (207)
++++|++|.+|+..++.+++.|+++++.+ .| +|..+++.++++++|++..+|.++..+.+... ....+++++|.+
T Consensus 198 l~~~pl~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~ 277 (525)
T PRK05851 198 CSWLPLYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVA 277 (525)
T ss_pred EEcCCCccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhhee
Confidence 36789999999988889999999999987 35 68889999999999987655555555543321 234567899999
Q ss_pred EEccCCCCHHHHHHHHHH---hCCCcCcceeccccccccceeeccCC----------------CCCCCccccccCCceEE
Q psy9665 76 RCGAAPVGKSTLDQVGER---LGLSMDSMKQGYGMTELTILVTFSDL----------------DVPSSSVGKVMPSMKMK 136 (207)
Q Consensus 76 ~~~G~~~~~~~~~~~~~~---~~~~~~~i~~~YG~tE~g~~~~~~~~----------------~~~~~~~G~~~~~~~~~ 136 (207)
++||++++++++++|.+. ++....++++.||+||++..+..... ..+..++|+|+|+++++
T Consensus 278 ~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~ 357 (525)
T PRK05851 278 LNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVR 357 (525)
T ss_pred EeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEE
Confidence 999999999999999875 34321248999999999866554321 12345799999999999
Q ss_pred EEeCCCC----CCCcceEEEEcCeeeecccccCCCcC----cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 137 VLVKSHT----MGSQDSFVISGDEIQFAPYCRKMSLG----AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 137 i~d~~~~----~g~~Gel~i~g~~~~~~gy~~~~~~~----~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+|+++. +|+.|||+|+|+.+ +.|||++++.+ +.|||+.+++ +|.++++||.++.++ ++|+||++
T Consensus 358 i~d~~~~~~~~~g~~GEl~v~g~~~-~~GY~~~~~~~~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~--~~G~~v~p 430 (525)
T PRK05851 358 ISPGDGAAGVAGREIGEIEIRGASM-MSGYLGQAPIDPDDWFPTGDLGYLV-DGGLVVCGRAKELIT--VAGRNIFP 430 (525)
T ss_pred EECCCCCccCCCCCeEEEEEecCch-hhccccCCccCCCCceeccceEEEE-CCEEEEEeecCCEEE--ECCEEeCH
Confidence 9998764 37899999999999 99999998653 3589998886 699999999888774 58999875
No 46
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=9.7e-28 Score=206.15 Aligned_cols=198 Identities=25% Similarity=0.368 Sum_probs=171.9
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+++|++|.+|+.. ++.++..|+++++.+.++++.+++.++++++|++.++|++++.|.+.......+++++|.+++||+
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~ 346 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAM 346 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCC
Confidence 5689999999874 667799999999999999999999999999999999999999999877666667889999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCC--C---CCCcceEEEE
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSH--T---MGSQDSFVIS 153 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~--~---~g~~Gel~i~ 153 (207)
++++++.+++.+.++.. +++.||+||++.++...+. ....+++|+|++++.++|+|+++ . +++.|||+++
T Consensus 347 ~l~~~~~~~~~~~~~~~---i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~ 423 (573)
T PRK05605 347 ALPVSTVELWEKLTGGL---LVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVR 423 (573)
T ss_pred cCCHHHHHHHHHHhCCC---eecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEe
Confidence 99999999999888865 9999999999877665544 34567899999999999999775 3 4889999999
Q ss_pred cCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.||+++++.+ +.+||+.+++.+|.+++.||-++... .+|.||+.
T Consensus 424 ~~~~-~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~gR~dd~i~--~~G~~v~p 480 (573)
T PRK05605 424 GPQV-FKGYWNRPEETAKSFLDGWFRTGDVVVMEEDGFIRIVDRIKELII--TGGFNVYP 480 (573)
T ss_pred cCch-hhhhcCChhHhhhcccCCCcccCCEEEEcCCCcEEEEecccccee--eCCEEECH
Confidence 9999 99999987554 35899999999999999999887774 47888763
No 47
>PRK05857 acyl-CoA synthetase; Validated
Probab=99.96 E-value=8.2e-28 Score=205.39 Aligned_cols=196 Identities=17% Similarity=0.154 Sum_probs=163.9
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~ 81 (207)
+.+|++|.+++...+.+++.|+++++ .+.++..+++.++++++|+++++|++++.+.+.......+++++|.+++||++
T Consensus 219 ~~~p~~h~~~l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~ 297 (540)
T PRK05857 219 SPLPATHIGGLWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSR 297 (540)
T ss_pred ecCCccccchHHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCcc
Confidence 56899999998878888999999875 46788999999999999999999999999988765555678899999999999
Q ss_pred CCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C-----CCCCccccccCCceEEEEeCCCCC---------CC
Q psy9665 82 VGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D-----VPSSSVGKVMPSMKMKVLVKSHTM---------GS 146 (207)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~-----~~~~~~G~~~~~~~~~i~d~~~~~---------g~ 146 (207)
++....+ +.+.++.+ +++.||+||++......+. . ...+++|+|+++++++|+|+++.+ ++
T Consensus 298 ~~~~~~~-~~~~~g~~---i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~ 373 (540)
T PRK05857 298 AIAADVR-FIEATGVR---TAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSAS 373 (540)
T ss_pred CCchhHH-HHHHhCCe---eecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCC
Confidence 9988875 45577755 9999999999865443322 1 245789999999999999987651 57
Q ss_pred cceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 147 QDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 147 ~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.|||+|+|+.+ +.|||++++.+ +.|||.++++.++.+++.||.++..+ .+|.|+++
T Consensus 374 ~Gel~v~g~~~-~~GY~~~~~~t~~~~~~g~~~TGDlg~~d~~g~l~~~GR~~~~ik--~~G~~v~p 437 (540)
T PRK05857 374 FGTLWIKSPAN-MLGYWNNPERTAEVLIDGWVNTGDLLERREDGFFYIKGRSSEMII--CGGVNIAP 437 (540)
T ss_pred cceEEEeCcch-hhhhhCCccchhhhcCCCceeccceEEEcCCceEEEeccccccEe--cCCEEECH
Confidence 89999999999 99999998765 34899999999999999999888774 57888875
No 48
>PRK13390 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=1.4e-27 Score=202.10 Aligned_cols=197 Identities=20% Similarity=0.218 Sum_probs=166.3
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+++...+..+..|+++++.+.+++..+++.++++++|++.++|+++..+.+.... ...+++++|.++.+|
T Consensus 200 ~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g 279 (501)
T PRK13390 200 SSAPIYHAAPLRWCSMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAA 279 (501)
T ss_pred ecccchhhhHHHHHHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcC
Confidence 568999999886555567789999999999999999999999999999999999998865432 234678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++++.+.+.+.++.. +++.||+||++.++..... ....+++|+|+++ +++++|++++ +|+.|||+|++
T Consensus 280 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~Gel~v~~ 355 (501)
T PRK13390 280 APCPVDVKHAMIDWLGPI---VYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRIGTVYFER 355 (501)
T ss_pred CCCCHHHHHHHHHhcCCc---eeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec
Confidence 999999999999988865 9999999999876554333 3456789999999 7999998887 48999999999
Q ss_pred CeeeecccccCCCcCc-----------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLGA-----------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~~-----------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.|||++++.+. .+||+.++++++.+.+.||.++.. +.+|.||++
T Consensus 356 ~~~-~~gy~~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i--~~~G~~v~p 414 (501)
T PRK13390 356 DRL-PFRYLNDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMI--ISGGVNIYP 414 (501)
T ss_pred CCc-cccccCChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccce--eECCeeeCH
Confidence 999 999999986542 478999999999999999987777 467888864
No 49
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=1.3e-27 Score=204.20 Aligned_cols=198 Identities=22% Similarity=0.267 Sum_probs=168.7
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+|+..++.++..|+++++.+ .++|..+++.++++++|+++++|+++..+.........+ .++|.+++||
T Consensus 221 ~~~p~~~~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg 299 (542)
T PRK07786 221 VGVPLFHIAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGA 299 (542)
T ss_pred EecchHHHHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECC
Confidence 5689999999988899999999999976 679999999999999999999999999998875433322 3799999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVIS 153 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~ 153 (207)
+++++++++++++.++.. .+++.||+||++.+...... .....++|+|++++.++|+|++++ +++.|||+++
T Consensus 300 ~~~~~~~~~~~~~~~~~~--~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~ 377 (542)
T PRK07786 300 APASDTLLRQMAATFPEA--QILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEVGEIVYR 377 (542)
T ss_pred CCCCHHHHHHHHHHcCCC--eEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCceEEEEE
Confidence 999999999999999655 69999999999876554332 245678999999999999998876 4889999999
Q ss_pred cCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.||+++++.+ +.|||.++.++++.+++.||.++..+ .+|.|+++
T Consensus 378 g~~~-~~gy~~~~~~~~~~f~~~~~~TGDl~~~~~~g~~~i~GR~~d~i~--~~G~~v~~ 434 (542)
T PRK07786 378 APTL-MSGYWNNPEATAEAFAGGWFHSGDLVRQDEEGYVWVVDRKKDMII--SGGENIYC 434 (542)
T ss_pred Chhh-hhhhcCCHHHHHHHhhCCcccccceEEEcCCceEEEEecccceEE--eCCEEECH
Confidence 9999 99999998655 35899999999999999999887775 46777764
No 50
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=99.96 E-value=2.5e-28 Score=214.22 Aligned_cols=196 Identities=17% Similarity=0.231 Sum_probs=155.3
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHH-------HHHhcCceEeeccHHHHHHHHhCCCC---------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLS-------SIEKYRVTLLPAVPPLVVFLAKSPLV--------- 64 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~~~--------- 64 (207)
++++|++|++++......+..|+++.+. ++..+++ .++++++|++.++|.+++.+.+....
T Consensus 314 ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~ 390 (700)
T PTZ00216 314 CSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLK 390 (700)
T ss_pred EEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHH
Confidence 3678999999987666667788877663 3555544 68899999999999999887642100
Q ss_pred ----------------CCC----------------CCCceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccc
Q psy9665 65 ----------------DQY----------------DLSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTI 112 (207)
Q Consensus 65 ----------------~~~----------------~l~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~ 112 (207)
... ..+++|.+++||+++++++.++++..++ . ++++||+||++.
T Consensus 391 ~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~---l~~~YG~TEt~~ 466 (700)
T PTZ00216 391 RRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-M---VIQGWGLTETVC 466 (700)
T ss_pred HHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-h---HhhccCcccccc
Confidence 000 0157999999999999999998887777 6 999999999986
Q ss_pred eeeccCC-CCCCCccccccCCceEEEEeCCC-----CCCCcceEEEEcCeeeecccccCCCcCc---------ccCCcEE
Q psy9665 113 LVTFSDL-DVPSSSVGKVMPSMKMKVLVKSH-----TMGSQDSFVISGDEIQFAPYCRKMSLGA---------YLCHWLK 177 (207)
Q Consensus 113 ~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~-----~~g~~Gel~i~g~~~~~~gy~~~~~~~~---------~~~d~~~ 177 (207)
....... ....+++|+|+|+++++|+|+++ .+++.|||+|+|+.+ +.|||++|+.+. .|||..+
T Consensus 467 ~~~~~~~~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~GEL~vrG~~v-~~GY~~~pe~T~~~f~~dGw~~TGDig~ 545 (700)
T PTZ00216 467 CGGIQRTGDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPRGEILLRGPFL-FKGYYKQEELTREVLDEDGWFHTGDVGS 545 (700)
T ss_pred cccccCCCCCCCCCcCCcCCCeEEEEeechhhccCCCCCCCceEEEcCCcc-cchhcCChhHhhhhccccCCeeccceEE
Confidence 6555444 55678999999999999999765 346789999999999 999999997663 3888888
Q ss_pred EcCeeEEEEEecCccccccccCCCcccc
Q psy9665 178 LKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 178 ~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++.+|.+.++||.++..+ +.+|+||+.
T Consensus 546 ~d~dG~l~i~GR~kd~ik-~~~G~~I~p 572 (700)
T PTZ00216 546 IAANGTLRIIGRVKALAK-NCLGEYIAL 572 (700)
T ss_pred EcCCCcEEEEEehHhhee-cCCCceecc
Confidence 888999999999888764 247888874
No 51
>PRK08315 AMP-binding domain protein; Validated
Probab=99.96 E-value=1.6e-27 Score=204.16 Aligned_cols=199 Identities=22% Similarity=0.331 Sum_probs=170.6
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
..+|++|.+|+.. ++.++..|+++++.. .+++..+++.++++++|++.++|+++..++........+++++|.++++|
T Consensus 245 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G 324 (559)
T PRK08315 245 IPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAG 324 (559)
T ss_pred EecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecC
Confidence 4679999999874 788899999999554 78999999999999999999999999999887665566789999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC----CCCCCccccccCCceEEEEeCC-CC---CCCcceEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL----DVPSSSVGKVMPSMKMKVLVKS-HT---MGSQDSFV 151 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----~~~~~~~G~~~~~~~~~i~d~~-~~---~g~~Gel~ 151 (207)
+++++++++++.+.++.. ++++.||+||++.++..... .....++|+|+++++++++|++ ++ +|+.|||+
T Consensus 325 ~~~~~~~~~~~~~~~~~~--~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~GEl~ 402 (559)
T PRK08315 325 SPCPIEVMKRVIDKMHMS--EVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQGELC 402 (559)
T ss_pred CCCCHHHHHHHHHHcCCc--ceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCceEEE
Confidence 999999999999999876 69999999999877665433 2456799999999999999988 66 48999999
Q ss_pred EEcCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 152 ISGDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 152 i~g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+|+.+ +.|||++++.+ +++||..+.+.++.+.++||-++..+ .+|.|+++
T Consensus 403 v~g~~~-~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~--~~G~~v~~ 462 (559)
T PRK08315 403 TRGYSV-MKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMII--RGGENIYP 462 (559)
T ss_pred EECchh-hhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEE--ECCEEEcH
Confidence 999999 99999987432 35899999998999999999777764 56777754
No 52
>PRK06188 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1.2e-27 Score=203.36 Aligned_cols=198 Identities=22% Similarity=0.311 Sum_probs=169.9
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
++.+|++|.+++. ++.+++.|+++++.+.+++..+++.++++++|++.++|+++..+++.......+++++|.+++||+
T Consensus 213 l~~~pl~~~~g~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~ 291 (524)
T PRK06188 213 LMCTPLSHAGGAF-FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGAS 291 (524)
T ss_pred EEecCchhhhhHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCC
Confidence 3578999998864 577899999999999999999999999999999999999999999887666667899999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-------CCCCCccccccCCceEEEEeCCCC---CCCcceE
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-------DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSF 150 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-------~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel 150 (207)
+++++..+++.+.++.. +++.||+||++..+..... .....++|+|+++++++++|++++ +|+.|||
T Consensus 292 ~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~Gel 368 (524)
T PRK06188 292 PMSPVRLAEAIERFGPI---FAQYYGQTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEVGEI 368 (524)
T ss_pred CCCHHHHHHHHHHhCch---hhheeCccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCeeEE
Confidence 99999999999998865 9999999999766554332 234568999999999999999887 4889999
Q ss_pred EEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 151 VISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 151 ~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+++++.+ +.||+++++.+ +.+||..+.+.++.+++.||-+... +.+|.|+++
T Consensus 369 ~v~~~~~-~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i--~~~G~~i~~ 428 (524)
T PRK06188 369 CVRGPLV-MDGYWNRPEETAEAFRDGWLHTGDVAREDEDGFYYIVDRKKDMI--VTGGFNVFP 428 (524)
T ss_pred EEECcch-hhhhcCChHHhhhhhcCCceeecceEEEcCCccEEEEeccccce--ecCCEEECH
Confidence 9999999 99999988554 3588889998899999999977776 457887763
No 53
>PRK07787 acyl-CoA synthetase; Validated
Probab=99.96 E-value=1.5e-27 Score=200.61 Aligned_cols=196 Identities=18% Similarity=0.225 Sum_probs=166.9
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|.+|+.. ++.++..|+++++.+.+++..+++.++ ++++++.++|+++..+.+.... ..+++++|.+++||+
T Consensus 174 ~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~-~~~l~~l~~~~~gg~ 251 (471)
T PRK07787 174 HGLPLFHVHGLVLGVLGPLRIGNRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEA-ARALRGARLLVSGSA 251 (471)
T ss_pred eccCCeeechhHHHHHHHHhcCCEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCccc-cccccceeEEEECCC
Confidence 5689999999884 888999999999999999999999999 9999999999999999875432 345789999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCCC----CC-cceEEEEc
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHTM----GS-QDSFVISG 154 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~----g~-~Gel~i~g 154 (207)
+++++++++|.+.++.. +++.||+||++........ ...+.++|+|+++++++|+|+++.+ ++ .|||+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~~Gei~v~g 328 (471)
T PRK07787 252 ALPVPVFDRLAALTGHR---PVERYGMTETLITLSTRADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGETVGELQVRG 328 (471)
T ss_pred CCCHHHHHHHHHHcCCC---eecccCccccCcceecCCCCcccCCcccccCCCcEEEEECCCCCCCCCCCCCceEEEEEC
Confidence 99999999999988865 9999999999876554444 4556789999999999999988763 33 79999999
Q ss_pred CeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecC-ccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFG-SQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg-~~~~~~~~~~~~~s~ 205 (207)
+.+ +.||+++++.+ +.|||+.+++.++.+++.||. ++.. +.+|.|++.
T Consensus 329 ~~~-~~gy~~~~~~t~~~~~~~~~~~TGDlg~~~~dg~l~~~GR~~d~~i--~~~G~~v~~ 386 (471)
T PRK07787 329 PTL-FDGYLNRPDATAAAFTADGWFRTGDVAVVDPDGMHRIVGRESTDLI--KSGGYRIGA 386 (471)
T ss_pred ccc-chhhcCChhhchhcccCCCceecCceEEEcCCCCEEEeCCCCceeE--eeCCEEECH
Confidence 999 99999988554 358999999999999999995 5555 467888764
No 54
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=1.8e-27 Score=203.24 Aligned_cols=198 Identities=20% Similarity=0.225 Sum_probs=167.5
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+++|++|.+++...+.++..|+++++.+ .+++..+++.++++++|++.++|+++..+.+.......+++++|.++++|+
T Consensus 224 ~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~ 303 (539)
T PRK07008 224 PVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGS 303 (539)
T ss_pred ecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCC
Confidence 5689999988776778899999999875 689999999999999999999999999998876655567889999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------------CCCCCccccccCCceEEEEeCCCCC----
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------------DVPSSSVGKVMPSMKMKVLVKSHTM---- 144 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------------~~~~~~~G~~~~~~~~~i~d~~~~~---- 144 (207)
++++++++++++.++.. +++.||+||++..+..... .....++|+|+|+++++|+|+++.+
T Consensus 304 ~l~~~~~~~~~~~~~~~---l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~ 380 (539)
T PRK07008 304 ACPPAMIRTFEDEYGVE---VIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWD 380 (539)
T ss_pred CCCHHHHHHHHHHhCCc---eecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCC
Confidence 99999999999999865 9999999999876543321 0123578999999999999988763
Q ss_pred -CCcceEEEEcCeeeecccccCC-----CcCcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 145 -GSQDSFVISGDEIQFAPYCRKM-----SLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 145 -g~~Gel~i~g~~~~~~gy~~~~-----~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++.|||+++|+.+ +.|||+++ +.-+.+||+.+.++++.+++.||.++... .+|.|+++
T Consensus 381 ~~~~Gei~v~g~~~-~~gy~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~--~~G~~v~p 444 (539)
T PRK07008 381 GKAFGDLQVRGPWV-IDRYFRGDASPLVDGWFPTGDVATIDADGFMQITDRSKDVIK--SGGEWISS 444 (539)
T ss_pred CCcceEEEEeCCcc-chhhcCChhhhhcCCCcccCceEEEcCCCcEEEeecccCEEE--eCCeEEcH
Confidence 2579999999999 99999987 22346999999999999999999887774 68888764
No 55
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.96 E-value=1.2e-27 Score=205.29 Aligned_cols=199 Identities=25% Similarity=0.380 Sum_probs=169.8
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++++|++|.+|+.. ++.+++.|+++++.+++++..+++.++++++|++.++|+++..+.+.......+++++|.+++||
T Consensus 253 l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg 332 (563)
T PRK06710 253 LGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGS 332 (563)
T ss_pred EEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCC
Confidence 35789999999874 66789999999999999999999999999999999999999999887655556678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeC-CCC---CCCcceEEEE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVK-SHT---MGSQDSFVIS 153 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~-~~~---~g~~Gel~i~ 153 (207)
+++++++++++.+.++.. +++.||+||++........ ...++++|+|.+++.++++|+ ++. +|+.|||+++
T Consensus 333 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~Gel~v~ 409 (563)
T PRK06710 333 APLPVEVQEKFETVTGGK---LVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEIGEIVVK 409 (563)
T ss_pred CcCCHHHHHHHHHhhCCC---EecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCCceEEEEe
Confidence 999999999999988865 9999999999876554333 345678999999999999984 443 4889999999
Q ss_pred cCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.||+++++.+ +.+||..++++++.+.++||.++..+ .+|.||+.
T Consensus 410 g~~~-~~gY~~~~~~~~~~~~~g~~~TGD~~~~~~~g~~~~~GR~dd~i~--~~G~~v~p 466 (563)
T PRK06710 410 GPQI-MKGYWNKPEETAAVLQDGWLHTGDVGYMDEDGFFYVKDRKKDMIV--ASGFNVYP 466 (563)
T ss_pred cCcc-chhhhCChHHHhhhcccCcccccceEEEcCCCcEEEeeccccEEE--ECCEEECH
Confidence 9999 99999998664 45899999999999999999887774 47888764
No 56
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=99.95 E-value=8.8e-28 Score=208.06 Aligned_cols=197 Identities=16% Similarity=0.151 Sum_probs=154.6
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeC-CCCH---HHHHHHHHhcCceEeeccHHHHHHHHhCC----CCCCCCCCc
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDG---HLFLSSIEKYRVTLLPAVPPLVVFLAKSP----LVDQYDLSS 71 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~---~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~~~~~l~~ 71 (207)
++++|++|++|+. .++.++..|+++++.+ .+++ ..+++.++++++|+++++|+++..|++.. .....++++
T Consensus 256 l~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~ 335 (614)
T PRK08180 256 VDWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSR 335 (614)
T ss_pred EEecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccc
Confidence 3678999999986 4778899999999987 4554 46788899999999999999999987642 222345789
Q ss_pred eeEEEEccCCCCHHHHHHHHHHh----CCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCCCCC
Q psy9665 72 LTNIRCGAAPVGKSTLDQVGERL----GLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHTMGS 146 (207)
Q Consensus 72 lr~~~~~G~~~~~~~~~~~~~~~----~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~g~ 146 (207)
+|.+++||+++++++.+++++.+ +. .+.+++.||+||++.++..... ....+++|+|+|+++++++|++ +
T Consensus 336 lr~v~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~d~~----~ 410 (614)
T PRK08180 336 LKLLFYAGAALSQDVWDRLDRVAEATCGE-RIRMMTGLGMTETAPSATFTTGPLSRAGNIGLPAPGCEVKLVPVG----G 410 (614)
T ss_pred eeEEEEccCCCCHHHHHHHHHHHHhhcCC-CceeeeeecccccCCceEecccccCCCCcccCccCCcEEEEecCC----C
Confidence 99999999999999999999753 32 1248999999999877665444 5567899999999999999864 4
Q ss_pred cceEEEEcCeeeecccccCCCcCc---------ccCCcEEEc----CeeEEEEEecCccccccccCCCccc
Q psy9665 147 QDSFVISGDEIQFAPYCRKMSLGA---------YLCHWLKLK----GKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 147 ~Gel~i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~----~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
.|||+|+|+.+ +.|||++|+.+. .|||..++. .++.+.+.||.++..+. .+|+||+
T Consensus 411 ~GEi~vrg~~v-~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~-~~G~~i~ 479 (614)
T PRK08180 411 KLEVRVKGPNV-TPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKL-SSGTWVS 479 (614)
T ss_pred CcEEEEecCcc-chhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEc-CCCcEec
Confidence 59999999999 999999986542 377777773 35678899987655531 2465554
No 57
>PRK09088 acyl-CoA synthetase; Validated
Probab=99.95 E-value=2.7e-27 Score=199.64 Aligned_cols=198 Identities=18% Similarity=0.269 Sum_probs=166.0
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHH--hcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEE
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIE--KYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRC 77 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~ 77 (207)
++.+|++|++|+.. +..++..|+++++.+.+++..++..+. ++++|+++.+|+++..+.+.+.....+++++|.+++
T Consensus 180 l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~ 259 (488)
T PRK09088 180 LCDAPMFHIIGLITSVRPVLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFT 259 (488)
T ss_pred EEecchHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEe
Confidence 35789999999885 777899999999998899999998886 489999999999999998876555556789999999
Q ss_pred ccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC----CCCCCccccccCCceEEEEeCCCC---CCCcceE
Q psy9665 78 GAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL----DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSF 150 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel 150 (207)
||++++++..+++.+. +.+ +++.||+||++.+...... ..+.+++|.|+|+++++|+|+++. +++.|||
T Consensus 260 gG~~~~~~~~~~~~~~-g~~---v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gel 335 (488)
T PRK09088 260 GGAPHAAEDILGWLDD-GIP---MVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVPGEL 335 (488)
T ss_pred cCCCCCHHHHHHHHHh-CCc---eeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCceEE
Confidence 9999999998888765 655 9999999999875433211 346678999999999999998876 3889999
Q ss_pred EEEcCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 151 VISGDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 151 ~i~g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+|+.+ +.||+++++.+ +.|||.+++++++.+++.||.++..+ .+|.|+++
T Consensus 336 ~v~~~~~-~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~--~~G~~i~~ 396 (488)
T PRK09088 336 LLRGPNL-SPGYWRRPQATARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFI--SGGENVYP 396 (488)
T ss_pred EEECCcc-chhhcCChhhhhhhhcCCCCeeecceEEEcCCCcEEEeccccceEE--eCCEEECH
Confidence 9999999 99999987543 35899999998999999999887775 47888764
No 58
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=2.2e-27 Score=203.29 Aligned_cols=198 Identities=20% Similarity=0.302 Sum_probs=169.0
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+++. ..+.++..|++.++.+ ..++..+++.+++++++.+..+|+++..+.........+++++|.++.||
T Consensus 257 ~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gg 336 (557)
T PRK07059 257 CALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANGGG 336 (557)
T ss_pred EeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEecc
Confidence 468999999876 5677888899887776 46899999999999999999999999999887665566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++.+.++|++.++.+ +++.||+||++.++..... ...+.++|+|+++++++++|++++ +|+.|||+++|
T Consensus 337 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~~Gel~v~g 413 (557)
T PRK07059 337 MAVQRPVAERWLEMTGCP---ITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGEPGEICIRG 413 (557)
T ss_pred ccCCHHHHHHHHHHhCCC---eeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCCceEEEEeC
Confidence 999999999999998865 9999999999887665543 345678999999999999999887 48899999999
Q ss_pred CeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.|||++++.+ +.+||..+.+.++.+.++||.++... .+|.||+.
T Consensus 414 ~~~-~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~--~~G~~i~p 470 (557)
T PRK07059 414 PQV-MAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMIL--VSGFNVYP 470 (557)
T ss_pred Ccc-chhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceE--ECCEEEcH
Confidence 999 99999987533 35889889988999999999887774 46888764
No 59
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.95 E-value=3.1e-27 Score=198.90 Aligned_cols=195 Identities=22% Similarity=0.253 Sum_probs=164.4
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~ 81 (207)
+.+|++|++++..++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+..... ....++|.++++|++
T Consensus 187 ~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~ 265 (483)
T PRK03640 187 AAVPIFHISGLSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGP 265 (483)
T ss_pred EecCHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCC
Confidence 5689999999888888999999999999999999999999999999999999999998654322 334689999999999
Q ss_pred CCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEcC
Q psy9665 82 VGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGD 155 (207)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~ 155 (207)
+++.+++++++. +.. +++.||+||++..+..... ....+++|+|++++++++.|++ . +++.|||+++|+
T Consensus 266 ~~~~~~~~~~~~-~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~~Gel~v~g~ 340 (483)
T PRK03640 266 APKPLLEQCKEK-GIP---VYQSYGMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFEEGEIVVKGP 340 (483)
T ss_pred CCHHHHHHHHHh-CCC---eeeeeccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCCceEEEEECc
Confidence 999999998874 765 9999999998754333222 3566899999999999999864 3 478899999999
Q ss_pred eeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 156 EIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 156 ~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+ +.||+++++.+ +.+||+.+++++|.+.++||.++..+ .+|.||++
T Consensus 341 ~~-~~gy~~~~~~~~~~~~~~~~~tGDl~~~~~~g~l~~~GR~~~~i~--~~G~~v~~ 395 (483)
T PRK03640 341 NV-TKGYLNREDATRETFQDGWFKTGDIGYLDEEGFLYVLDRRSDLII--SGGENIYP 395 (483)
T ss_pred ch-hhhhcCCHHHHHHHHhcCCeeccceEEEcCCCCEEEeecccCeEE--eCCEEECH
Confidence 99 99999998654 35899999999999999999887774 57878764
No 60
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=99.95 E-value=4.7e-27 Score=200.68 Aligned_cols=198 Identities=23% Similarity=0.357 Sum_probs=168.8
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|.+++.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.+.....+++++|.+++||+
T Consensus 243 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~ 322 (541)
T TIGR03205 243 CVLPLFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGA 322 (541)
T ss_pred EeccHHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccc
Confidence 4679999999874 778899999999988899999999999999999999999999998765544556789999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEe--CCCC---CCCcceEEEE
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLV--KSHT---MGSQDSFVIS 153 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d--~~~~---~g~~Gel~i~ 153 (207)
++++++.+++.+.++.. +++.||+||++..++.... ....+++|+|++++.+++.+ ++++ +++.|||+++
T Consensus 323 ~~~~~~~~~~~~~~~~~---~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~Gel~v~ 399 (541)
T TIGR03205 323 PLPVEVANFFERKTGLK---LKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEVGELRIR 399 (541)
T ss_pred cCCHHHHHHHHHHhCCC---eecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCCCeeEEEEe
Confidence 99999999999888865 9999999999877665533 44567899999999988864 4443 4889999999
Q ss_pred cCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.|||++++.+ +.|||+.+++.++.+.++||.++..+ .+|.||++
T Consensus 400 ~~~~-~~gy~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~i~GR~~~~i~--~~G~~i~~ 456 (541)
T TIGR03205 400 GPNV-TRGYWNRPEESAEAFVGDRFLTGDIGYMDTDGYFFLVDRKKDMII--SGGFNVYP 456 (541)
T ss_pred cCCc-cccccCChhhhHhhhccCCcccCceEEEcCCceEEEEccccCeEE--ECCEEECH
Confidence 9999 99999988654 35899999999999999999888885 57888874
No 61
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=99.95 E-value=5.4e-27 Score=198.76 Aligned_cols=198 Identities=15% Similarity=0.190 Sum_probs=168.5
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+++.. ++.++..|+++++.+ .+++..+++.++++++|++.++|+++..+.+..........++|.++++|
T Consensus 208 ~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G 287 (508)
T TIGR02262 208 SAAKLFFAYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAG 287 (508)
T ss_pred EcCchHHHHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcC
Confidence 5689999999864 777899999999987 57999999999999999999999999888776544344567899999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEcC
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGD 155 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~ 155 (207)
+++++++++.|++.++.+ +++.||+||++.++..... ....+++|+|+++++++++|+++. +++.|||+++|+
T Consensus 288 ~~l~~~~~~~~~~~~~~~---v~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~Gel~i~~~ 364 (508)
T TIGR02262 288 EALPAEVGQRWQARFGVD---IVDGIGSTEMLHIFLSNLPGDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEPGELLISGP 364 (508)
T ss_pred CCCCHHHHHHHHHHhCCc---hhhCccccccCceeecCCccCCCCCCcCCCCCCcEEEEECCCCCCCCCCCeeEEEEecC
Confidence 999999999999999865 9999999999977665433 445678999999999999998776 488999999999
Q ss_pred eeeecccccCCCcCc--------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 156 EIQFAPYCRKMSLGA--------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 156 ~~~~~gy~~~~~~~~--------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+ +.||+++++.+. .+||..+..+++.+.+.||.++.. ..+|.|+++
T Consensus 365 ~~-~~gY~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~gR~~d~i--~~~G~~v~~ 419 (508)
T TIGR02262 365 SS-ATMYWNNRAKTRDTFQGEWTRSGDKYVRNDDGSYTYAGRTDDML--KVSGIYVSP 419 (508)
T ss_pred cc-ccccCCCHHHhHhhhhcCceeccceEEEcCCccEEEecccccee--eeCCEEECH
Confidence 99 999999886542 488888888899999999988887 457888775
No 62
>PRK07470 acyl-CoA synthetase; Validated
Probab=99.95 E-value=3.4e-27 Score=200.85 Aligned_cols=197 Identities=24% Similarity=0.337 Sum_probs=166.3
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
.++|++|.+++..++ .++.|++.++.+ .++++.+++.++++++|++.++|++++.+.+.+.....+++++|.++++|
T Consensus 211 ~~~p~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG 289 (528)
T PRK07470 211 VVAPLSHGAGIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAG 289 (528)
T ss_pred EeccchhHHHHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcC
Confidence 468999999986544 567788877765 57999999999999999999999999999887765566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---------CCCCCccccccCCceEEEEeCCCC---CCCc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---------DVPSSSVGKVMPSMKMKVLVKSHT---MGSQ 147 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---------~~~~~~~G~~~~~~~~~i~d~~~~---~g~~ 147 (207)
+++++++.+++.+.++.. +++.||+||++..+..... ....+++|+|+++++++++|++++ +|+.
T Consensus 290 ~~l~~~~~~~~~~~~g~~---~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~ 366 (528)
T PRK07470 290 APMYRADQKRALAKLGKV---LVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGET 366 (528)
T ss_pred CCCCHHHHHHHHHHhCcH---HHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCc
Confidence 999999999999999865 9999999999876554321 123468899999999999999887 3889
Q ss_pred ceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 148 DSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 148 Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|||+++|+.+ +.|||++++.+ +.|||..+++.++.+.+.||.++..+ .+|.|+++
T Consensus 367 Gel~i~~~~~-~~gy~~~~~~~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~dd~i~--~~G~~v~~ 429 (528)
T PRK07470 367 GEICVIGPAV-FAGYYNNPEANAKAFRDGWFRTGDLGHLDARGFLYITGRASDMYI--SGGSNVYP 429 (528)
T ss_pred eEEEEeCCcc-chhhcCCHHHHHhhhcCCcEecceeEEEccCCeEEEeCCccceEE--eCCEEECH
Confidence 9999999999 99999988654 45889999988999999999887774 57888764
No 63
>PRK12467 peptide synthase; Provisional
Probab=99.95 E-value=2.6e-27 Score=235.13 Aligned_cols=198 Identities=20% Similarity=0.250 Sum_probs=171.7
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCC--CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPH--FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
+.+.|++|..+...++.++..|+++++.+. +++..+++.++++++|++.++|++++.+.+... ..+++++|.+++|
T Consensus 3282 l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~g 3359 (3956)
T PRK12467 3282 LLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--GADCASLDIYVFG 3359 (3956)
T ss_pred EEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc--ccCCCCceEEEEe
Confidence 357899999998889999999999999885 799999999999999999999999999987643 3467889999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccccCCceEEEEeCCCC---CCCcce
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDS 149 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Ge 149 (207)
|+++++++.++|.+.++.. +++|.||+||++..++.... .....++|+|+++++++|+|++++ +|+.||
T Consensus 3360 Ge~~~~~~~~~~~~~~~~~--~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~~GE 3437 (3956)
T PRK12467 3360 GEAVPPAAFEQVKRKLKPR--GLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGVAGE 3437 (3956)
T ss_pred cCCCCHHHHHHHHHhCCCC--EEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCCCce
Confidence 9999999999999888755 69999999999877654332 123468999999999999998887 399999
Q ss_pred EEEEcCeeeecccccCCCcC----------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQFAPYCRKMSLG----------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~~~gy~~~~~~~----------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+|+|+.+ ++|||++|+.+ ++|||..+++.+|.+.++||.++.. +++|.||++
T Consensus 3438 L~i~G~~v-~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~i--ki~G~rIe~ 3506 (3956)
T PRK12467 3438 LYIGGVGL-ARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQV--KIRGFRIEL 3506 (3956)
T ss_pred EEEcchhh-hhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceE--eeceEeecH
Confidence 99999999 99999999655 3488999999999999999988877 568999875
No 64
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=99.95 E-value=7.3e-27 Score=197.50 Aligned_cols=198 Identities=18% Similarity=0.221 Sum_probs=166.8
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCC---CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPH---FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
+++|++|.+++..++.+++.|+++++.++ .++..+++.+++++++.+..+|++++.+.........+++++|.++++
T Consensus 187 ~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~ 266 (502)
T TIGR01734 187 NQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFC 266 (502)
T ss_pred eecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEc
Confidence 56899999998888999999999999874 588999999999999999999999988876654455677899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccccCCceEEEEeCCCC---CCCcce
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDS 149 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Ge 149 (207)
|+++++++.+++.+.++.. ++++.||+||++..+..... .....++|++.++++++|+|+++. +|+.||
T Consensus 267 G~~~~~~~~~~~~~~~~~~--~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~Ge 344 (502)
T TIGR01734 267 GEELPVKTAKALLERFPKA--TIYNTYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEKGE 344 (502)
T ss_pred CCcCCHHHHHHHHHHCCCc--EEEeCccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCeeE
Confidence 9999999999999998655 69999999998765443221 234457999999999999999887 488999
Q ss_pred EEEEcCeeeecccccCCCcCc------------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQFAPYCRKMSLGA------------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~~~gy~~~~~~~~------------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+++|+.+ +.||+++++.+. .|||..+++++ .+++.||.+++. +++|.||+.
T Consensus 345 l~v~g~~~-~~gy~~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i--~~~G~~v~~ 408 (502)
T TIGR01734 345 IVIVGPSV-SKGYLNNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQI--KLHGYRIEL 408 (502)
T ss_pred EEEccccc-cccccCCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeE--EECcEEeCH
Confidence 99999999 999999886542 38898898876 999999987776 568888864
No 65
>PRK07514 malonyl-CoA synthase; Validated
Probab=99.95 E-value=8.4e-27 Score=197.21 Aligned_cols=196 Identities=22% Similarity=0.335 Sum_probs=167.3
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|..|+.. ++.++..|+++++.+.+++..+++.++ ++|++.++|+++..+.+.+......++++|.+++||+
T Consensus 202 ~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 279 (504)
T PRK07514 202 HALPIFHTHGLFVATNVALLAGASMIFLPKFDPDAVLALMP--RATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSA 279 (504)
T ss_pred EecchHHHHHHHHHHHHHHhcCcEEEECCCCCHHHHHHHHH--hheeeecHHHHHHHHHcCCCCCcccccceeeEEecCC
Confidence 5679999999874 778899999999999999999999994 6999999999999998876655667889999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEe-CCCC---CCCcceEEEEcC
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLV-KSHT---MGSQDSFVISGD 155 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d-~~~~---~g~~Gel~i~g~ 155 (207)
+++++++++|++.++.. +++.||+||++........ .....++|.|+++++++++| ++++ .|+.|||+|+|+
T Consensus 280 ~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~Gel~i~~~ 356 (504)
T PRK07514 280 PLLAETHREFQERTGHA---ILERYGMTETNMNTSNPYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEIGMIEVKGP 356 (504)
T ss_pred CCCHHHHHHHHHHhCCc---ceeecccccccccccCCccccccCcccccCCCCcEEEEEECCCCCCCCCCCceEEEEecC
Confidence 99999999999998865 9999999999866554333 44567899999999999999 6665 378999999999
Q ss_pred eeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 156 EIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 156 ~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+ +.||+++++.+ +.+||+.+++.++.+.+.||.++..+ .+|.+|+.
T Consensus 357 ~~-~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~--~~G~~i~~ 412 (504)
T PRK07514 357 NV-FKGYWRMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLII--SGGYNVYP 412 (504)
T ss_pred Cc-cccccCCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEE--eCCeEECH
Confidence 99 99999988554 35899999999999999999887774 46777754
No 66
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=99.95 E-value=1.2e-26 Score=196.69 Aligned_cols=198 Identities=23% Similarity=0.214 Sum_probs=168.0
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC--CCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL--VDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~~~~~G 79 (207)
..+|++|..+....+.++..|+++++.+.+++..+++.++++++|++.++|+++..+++... ....+++++|.+++||
T Consensus 201 ~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg 280 (509)
T PRK12406 201 LTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAA 280 (509)
T ss_pred EEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcC
Confidence 46799999887777777889999999988999999999999999999999999999987543 2345678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++++++++.+.++.. +++.||+||++.++..... ...++++|+|+++++++++|++++ +|+.|||++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~~ 357 (509)
T PRK12406 281 APCPADVKRAMIEWWGPV---IYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEIGEIYSRI 357 (509)
T ss_pred CCCCHHHHHHHHHHcCCc---EEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCceEEEEEC
Confidence 999999999999998865 9999999999987665433 346678999999999999998886 38899999999
Q ss_pred Ceeeec-ccccCCCcCc--------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFA-PYCRKMSLGA--------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~-gy~~~~~~~~--------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +. +|+++++.+. .|||..+++.++.+.+.||-++..+ .+|.||+.
T Consensus 358 ~~~-~~~~y~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik--~~G~~v~~ 414 (509)
T PRK12406 358 AGN-PDFTYHNKPEKRAEIDRGGFITSGDVGYLDADGYLFLCDRKRDMVI--SGGVNIYP 414 (509)
T ss_pred Ccc-ccccccCCchhcccccCCCCeEEccEEEEcCCceEEEeecccceEE--ECCEEECH
Confidence 987 54 8998885442 3888889988999999999887774 57888764
No 67
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=99.95 E-value=5.3e-27 Score=193.28 Aligned_cols=196 Identities=19% Similarity=0.220 Sum_probs=167.1
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCC---CHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHF---DGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
+..|++|.+++..++.++..|+++++.+.. .+..+.+.+++++++.+.++|++++.+.+... ..++++|.++++
T Consensus 166 ~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~ 242 (408)
T TIGR01733 166 QFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALP---PALASLRLVILG 242 (408)
T ss_pred EecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhh---hcccCceEEEEe
Confidence 467999999988899999999999998854 36899999999999999999999999988754 567899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC----CC--CCCccccccCCceEEEEeCCCC---CCCcce
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL----DV--PSSSVGKVMPSMKMKVLVKSHT---MGSQDS 149 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----~~--~~~~~G~~~~~~~~~i~d~~~~---~g~~Ge 149 (207)
|+++++++++++.+.++.. .+++.||+||++.++..... .. ...++|+|+++++++|+|++++ +|+.||
T Consensus 243 g~~~~~~~~~~~~~~~~~~--~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Ge 320 (408)
T TIGR01733 243 GEALTPALVDRWRARGPGA--RLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLDDDLRPVPVGVVGE 320 (408)
T ss_pred CccCCHHHHHHHHHhCCCc--EEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEECCCCCCCCCCCceE
Confidence 9999999999999999844 59999999999987753322 11 2678999999999999999876 488999
Q ss_pred EEEEcCeeeecccccCCCcC-----------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQFAPYCRKMSLG-----------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~~~gy~~~~~~~-----------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+|+++.+ +.||+++++.+ +.+||+.++++++.+.+.||-++.. +.+|.|++.
T Consensus 321 l~v~~~~~-~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~~g~~~~~gR~~~~i--~~~G~~v~~ 390 (408)
T TIGR01733 321 LYIGGPGV-ARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRYLPDGNLEFLGRIDDQV--KIRGYRIEL 390 (408)
T ss_pred EEecCccc-cccccCChhhhhcceeeCCCCCCCCceEEECCceEEEcCCCCEEEeeccCCEE--EeCeEEech
Confidence 99999999 99999876432 4588999999999999999988775 557888764
No 68
>PRK09274 peptide synthase; Provisional
Probab=99.95 E-value=3.8e-27 Score=201.63 Aligned_cols=192 Identities=18% Similarity=0.264 Sum_probs=154.6
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC-------CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeE
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP-------HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTN 74 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~-------~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~ 74 (207)
+++|++|.++ +..|+++++.+ .+++..+++.++++++|+++++|++++.|.+.......+++++|.
T Consensus 220 ~~~pl~~~~~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~ 292 (552)
T PRK09274 220 PTFPLFALFG-------PALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRR 292 (552)
T ss_pred eccCHHHhhh-------hhhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhE
Confidence 4567766554 34588888764 468999999999999999999999999998876545567899999
Q ss_pred EEEccCCCCHHHHHHHHHHhCC-CcCcceeccccccccceeeccCC-----------CCCCCccccccCCceEEEEeCC-
Q psy9665 75 IRCGAAPVGKSTLDQVGERLGL-SMDSMKQGYGMTELTILVTFSDL-----------DVPSSSVGKVMPSMKMKVLVKS- 141 (207)
Q Consensus 75 ~~~~G~~~~~~~~~~~~~~~~~-~~~~i~~~YG~tE~g~~~~~~~~-----------~~~~~~~G~~~~~~~~~i~d~~- 141 (207)
+++||+++++++++++++.|+. . ++++.||+||++.++..... .....++|+|+|+++++|+|++
T Consensus 293 ~~~gG~~~~~~~~~~~~~~~~~~~--~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~ 370 (552)
T PRK09274 293 VISAGAPVPIAVIERFRAMLPPDA--EILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISD 370 (552)
T ss_pred EEecCCcCCHHHHHHHHHHcCCCc--eEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccc
Confidence 9999999999999999999964 3 59999999999876553321 1122378999999999999853
Q ss_pred --------CC---CCCcceEEEEcCeeeecccccCCCcC-------------cccCCcEEEcCeeEEEEEecCccccccc
Q psy9665 142 --------HT---MGSQDSFVISGDEIQFAPYCRKMSLG-------------AYLCHWLKLKGKQTVLVLGFGSQSCEEN 197 (207)
Q Consensus 142 --------~~---~g~~Gel~i~g~~~~~~gy~~~~~~~-------------~~~~d~~~~~~~~~~~i~grg~~~~~~~ 197 (207)
++ +|+.|||+|+|+.+ +.|||++++.+ +.|||+.+++.+|.+++.||.++.. +
T Consensus 371 ~~~~~~~~~~~~~~g~~Gel~v~g~~~-~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i--~ 447 (552)
T PRK09274 371 APIPEWDDALRLATGEIGEIVVAGPMV-TRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRV--E 447 (552)
T ss_pred cccccccccccCCCCCeeEEEEecCcc-cccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeE--E
Confidence 23 38899999999999 99999987432 2488888888899999999988777 4
Q ss_pred cCCCcccc
Q psy9665 198 LGADNISL 205 (207)
Q Consensus 198 ~~~~~~s~ 205 (207)
.+|.||+.
T Consensus 448 ~~G~~v~p 455 (552)
T PRK09274 448 TAGGTLYT 455 (552)
T ss_pred ECCEEECc
Confidence 67888875
No 69
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=99.95 E-value=1e-26 Score=198.82 Aligned_cols=197 Identities=17% Similarity=0.236 Sum_probs=168.8
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
++.+|++|.+++..++.++..|+++++.+++++..+++.++++++|++.++|+++..|.+.+.......+++|.++.+|
T Consensus 225 l~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~- 303 (542)
T PRK06155 225 YTTLPLFHTNALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG- 303 (542)
T ss_pred EEecCHHHHHHHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC-
Confidence 3578999999998888999999999999999999999999999999999999999999887665555667899887665
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCCC---CCcceEEEEcC--
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHTM---GSQDSFVISGD-- 155 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~---g~~Gel~i~g~-- 155 (207)
+++++.+++++.++.+ +++.||+||++.++.........+++|.|.++++++|+|+++++ |+.|||+++++
T Consensus 304 -~~~~~~~~~~~~~~~~---v~~~YG~tE~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~Gei~v~~~~~ 379 (542)
T PRK06155 304 -VPAALHAAFRERFGVD---LLDGYGSTETNFVIAVTHGSQRPGSMGRLAPGFEARVVDEHDQELPDGEPGELLLRADEP 379 (542)
T ss_pred -CCHHHHHHHHHHcCCC---EEeeecccccCccccCCCCCCCCCCcCccCCCceEEEECCCCCCCCCCCceEEEEecCCc
Confidence 6799999999999876 99999999998876654335567889999999999999988773 88899999998
Q ss_pred -eeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 156 -EIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 156 -~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+ +.||+++++.+ +.+||..+++.+|.+.++||.++..+ .+|.|++.
T Consensus 380 ~~~-~~GY~~~~~~~~~~~~~~~~~TGD~~~~~~dG~l~i~GR~~d~i~--~~G~~v~p 435 (542)
T PRK06155 380 FAF-ATGYFGMPEKTVEAWRNLWFHTGDRVVRDADGWFRFVDRIKDAIR--RRGENISS 435 (542)
T ss_pred ccc-chhhcCCHHHHHHhhcCCcEeccceEEEcCCceEEEEecCCCEEE--eCCEEECH
Confidence 57 89999988543 34899999999999999999888774 57888764
No 70
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=99.95 E-value=6.4e-27 Score=204.05 Aligned_cols=199 Identities=14% Similarity=0.134 Sum_probs=155.5
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCC--------C---------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSP--------L--------- 63 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--------~--------- 63 (207)
++++|++|+++....+.++..|+++++.+. ++..+++.++++++|++.++|.+++.+.+.. .
T Consensus 270 ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 348 (660)
T PLN02430 270 LSFLPLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNAL 348 (660)
T ss_pred EEeCcHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 468999999998876677899999988753 7888999999999999999999998876410 0
Q ss_pred --------------CCCC---C----------C-CceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceee
Q psy9665 64 --------------VDQY---D----------L-SSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVT 115 (207)
Q Consensus 64 --------------~~~~---~----------l-~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~ 115 (207)
.... + + +++|.+++||+++++++.+.++ .++.. .++++||+||+++..+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~--~i~~~YG~TE~~~~~~ 425 (660)
T PLN02430 349 YKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCA--FVVQGYGLTETLGPTT 425 (660)
T ss_pred HHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCC--CeeeecchhhhhhceE
Confidence 0000 0 1 5899999999999999866555 55543 4999999999987665
Q ss_pred ccCC--CCCCCccccccCCceEEEEeCC--CC----CCCcceEEEEcCeeeecccccCCCcCc--------ccCCcEEEc
Q psy9665 116 FSDL--DVPSSSVGKVMPSMKMKVLVKS--HT----MGSQDSFVISGDEIQFAPYCRKMSLGA--------YLCHWLKLK 179 (207)
Q Consensus 116 ~~~~--~~~~~~~G~~~~~~~~~i~d~~--~~----~g~~Gel~i~g~~~~~~gy~~~~~~~~--------~~~d~~~~~ 179 (207)
.... ....+++|+|.++++++++|.+ +. +++.|||+|+|+.+ +.|||++|+.+. .|||..+++
T Consensus 426 ~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v-~~GY~~~~e~t~~~~~dGw~~TGDig~~d 504 (660)
T PLN02430 426 LGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCL-FSGYYKNPELTEEVMKDGWFHTGDIGEIL 504 (660)
T ss_pred eeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCc-cccccCChHHhhhhhhccceeccceEEEC
Confidence 5433 3457899999999999998732 21 24579999999999 999999997664 378888888
Q ss_pred CeeEEEEEecCccccccccCCCcccc
Q psy9665 180 GKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 180 ~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+|.+.|.||.++..+- -+|+||+.
T Consensus 505 ~dG~l~i~gR~kd~ik~-~~G~~V~p 529 (660)
T PLN02430 505 PNGVLKIIDRKKNLIKL-SQGEYVAL 529 (660)
T ss_pred CCCcEEEEEcccccEEc-CCCcEEch
Confidence 89999999998888742 25888864
No 71
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=2.9e-27 Score=205.45 Aligned_cols=201 Identities=19% Similarity=0.284 Sum_probs=158.7
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeC--CC--CHHHHHHHHHhcCc---eEeeccHHHHHHHHhC---CCC--CCCC
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLP--HF--DGHLFLSSIEKYRV---TLLPAVPPLVVFLAKS---PLV--DQYD 68 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~--~~--~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~---~~~--~~~~ 68 (207)
++++|++|.+|+..++.+++.|+++++.+ .+ +|..+++.++++++ +++..+|+++..+... +.. ...+
T Consensus 225 l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~ 304 (631)
T PRK07769 225 VSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLD 304 (631)
T ss_pred EEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcc
Confidence 36789999999987777788899998885 35 89999999999886 7888899988776653 211 1457
Q ss_pred CCceeEEEEccCCCCHHHHHHHHHHhC---CCcCcceeccccccccceeeccCC-CC-----------------------
Q psy9665 69 LSSLTNIRCGAAPVGKSTLDQVGERLG---LSMDSMKQGYGMTELTILVTFSDL-DV----------------------- 121 (207)
Q Consensus 69 l~~lr~~~~~G~~~~~~~~~~~~~~~~---~~~~~i~~~YG~tE~g~~~~~~~~-~~----------------------- 121 (207)
++++|.+++||++++++++++|.+.|+ .....+++.||+||++..+...+. ..
T Consensus 305 l~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 384 (631)
T PRK07769 305 LSNVKGLLNGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADA 384 (631)
T ss_pred hhheeeEEeccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCC
Confidence 889999999999999999999999883 211148999999999766554332 10
Q ss_pred ----CCCccccccCCceEEEEeC-CCC---CCCcceEEEEcCeeeecccccCCCcC------------------------
Q psy9665 122 ----PSSSVGKVMPSMKMKVLVK-SHT---MGSQDSFVISGDEIQFAPYCRKMSLG------------------------ 169 (207)
Q Consensus 122 ----~~~~~G~~~~~~~~~i~d~-~~~---~g~~Gel~i~g~~~~~~gy~~~~~~~------------------------ 169 (207)
...++|+|.++++++|+|+ ++. +|+.|||+|+|+.+ +.|||++++.+
T Consensus 385 ~~~~~~~s~G~~~~~~~~~ivd~~~g~~~~~ge~GEl~v~gp~v-~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~ 463 (631)
T PRK07769 385 PNAVAQVSAGKVGVSEWAVIVDPETASELPDGQIGEIWLHGNNI-GTGYWGKPEETAATFQNILKSRLSESHAEGAPDDA 463 (631)
T ss_pred CCceeEEeCCCcCCCcEEEEEcCCCCcCCCCCCEEEEEecCCCc-cccccCChhHHHHHHhhhcccccccccccCcccCC
Confidence 1247899999999999995 444 48999999999999 99999988543
Q ss_pred --cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 170 --AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 170 --~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++|||+.++. +|.++++||.++.+ +++|+||+.
T Consensus 464 gw~~TGDlg~~~-dG~l~i~GR~~d~I--k~~G~~V~p 498 (631)
T PRK07769 464 LWVRTGDYGVYF-DGELYITGRVKDLV--IIDGRNHYP 498 (631)
T ss_pred CeeeccccccEE-CCEEEEEcccccEE--EECCeeeCH
Confidence 2477777774 79999999988887 458999874
No 72
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=99.95 E-value=8.4e-27 Score=202.43 Aligned_cols=198 Identities=17% Similarity=0.190 Sum_probs=163.9
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC----CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC--CCCCCCCceeE
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP----HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL--VDQYDLSSLTN 74 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~ 74 (207)
++.|+.|+++.. .++.+++.|+++++.+ .+++..+++.++++++|++.++|++++.|.+... ....+++++|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~ 359 (629)
T PRK10524 280 CASDIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRA 359 (629)
T ss_pred EcCCCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeE
Confidence 467888988865 5888999999999986 3479999999999999999999999999887643 23457889999
Q ss_pred EEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-----CCCCCccccccCCceEEEEeC-CCC---CC
Q psy9665 75 IRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-----DVPSSSVGKVMPSMKMKVLVK-SHT---MG 145 (207)
Q Consensus 75 ~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-----~~~~~~~G~~~~~~~~~i~d~-~~~---~g 145 (207)
++++|+++++++++++.+.++.+ +++.||+||++..+..... ....+++|+|+++++++|+|+ +|+ +|
T Consensus 360 i~~~Ge~l~~~~~~~~~~~~~~~---v~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g 436 (629)
T PRK10524 360 LFLAGEPLDEPTASWISEALGVP---VIDNYWQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPN 436 (629)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCC---eEeccccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCC
Confidence 99999999999999999999866 9999999999843332211 235678999999999999998 776 48
Q ss_pred CcceEEEEcC---eeeecccccCCCc------------CcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 146 SQDSFVISGD---EIQFAPYCRKMSL------------GAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 146 ~~Gel~i~g~---~~~~~gy~~~~~~------------~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||+|+|| .+ +.+||++++. -+.+||+.+++.+|.+++.||-+++. +++|.||+.
T Consensus 437 ~~Gel~i~gp~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i--~~~G~ri~p 508 (629)
T PRK10524 437 EKGVLVIEGPLPPGC-MQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVI--NVAGHRLGT 508 (629)
T ss_pred CcEEEEEcCCCChhh-cCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeE--EeCCEEeCH
Confidence 8999999998 45 7899988742 24589999999999999999987777 567888864
No 73
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=99.95 E-value=1e-26 Score=199.33 Aligned_cols=198 Identities=20% Similarity=0.253 Sum_probs=168.3
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+++.. .+..+..|+++++.. .+++..+++.++++++|++..+|+++..+.+.....+.+++++|.+++||
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG 338 (560)
T PRK08751 259 TALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGG 338 (560)
T ss_pred EecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCC
Confidence 4579999999864 566677788777665 67899999999999999999999999999987665566788999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++++.+.|++.++.. +++.||+||++..+...+. ....+++|.|+++++++++|+++. +++.|||+|+|
T Consensus 339 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~Gel~v~~ 415 (560)
T PRK08751 339 MAVQRSVAERWKQVTGLT---LVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGEIGELCIKG 415 (560)
T ss_pred CCCCHHHHHHHHHHhCCe---EEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCCCceEEEEec
Confidence 999999999999988865 9999999999877665543 345678999999999999998887 48899999999
Q ss_pred CeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.|||++++.+ +.+||..+++.+|.+++.||-++.. +.+|.||++
T Consensus 416 ~~~-~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i--~~~G~~v~p 472 (560)
T PRK08751 416 PQV-MKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMI--LVSGFNVYP 472 (560)
T ss_pred Ccc-chhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhhe--eECCEEEcH
Confidence 999 99999998553 3589999999999999999987777 447888875
No 74
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=1e-26 Score=197.04 Aligned_cols=198 Identities=25% Similarity=0.325 Sum_probs=170.7
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~ 81 (207)
+.+|++|.+++...+.++..|+++++.+.+++..+++.++++++|.++++|++++.+.+.......+++++|.++++|++
T Consensus 213 ~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~ 292 (521)
T PRK06187 213 VIVPMFHVHAWGLPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAA 292 (521)
T ss_pred EeCCchHHhhHHHHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcC
Confidence 56899999999876679999999999998899999999999999999999999999998876656678899999999999
Q ss_pred CCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C------CCCCccccccCCceEEEEeCCCC---C--CCcce
Q psy9665 82 VGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D------VPSSSVGKVMPSMKMKVLVKSHT---M--GSQDS 149 (207)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~------~~~~~~G~~~~~~~~~i~d~~~~---~--g~~Ge 149 (207)
+++++++++.+.++.. +++.||+||++..+..... . ....++|+|+++++++|+|+++. + |+.||
T Consensus 293 l~~~~~~~~~~~~~~~---v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~Ge 369 (521)
T PRK06187 293 LPPALLREFKEKFGID---LVQGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEVGE 369 (521)
T ss_pred CCHHHHHHHHHHhCcc---hheeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCeeE
Confidence 9999999999998755 9999999999877665543 2 26678999999999999999886 3 78899
Q ss_pred EEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+++++.+ +.||+++++.+ +++||..++++++.+.+.||-++..+ ..|.++++
T Consensus 370 l~v~~~~~-~~~y~~~~~~~~~~~~~~~~~tGD~~~~~~~g~~~~~GR~~~~i~--~~G~~v~~ 430 (521)
T PRK06187 370 IIVRGPWL-MQGYWNRPEATAETIDGGWLHTGDVGYIDEDGYLYITDRIKDVII--SGGENIYP 430 (521)
T ss_pred EEEECcch-hhhhcCCHHHHHHHhhCCceeccceEEEcCCCCEEEeecccceEE--cCCeEECH
Confidence 99999999 99999886433 35899999988999999999777664 46766653
No 75
>PRK05852 acyl-CoA synthetase; Validated
Probab=99.95 E-value=1.4e-26 Score=197.51 Aligned_cols=199 Identities=21% Similarity=0.332 Sum_probs=164.4
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeC--CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCC--CCCCCceeEE
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLP--HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVD--QYDLSSLTNI 75 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~~ 75 (207)
++++|++|.+|+.. ++.+++.|+++++.+ .+++..+++.++++++|+++++|+++..+.+..... ..+++++|.+
T Consensus 221 ~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i 300 (534)
T PRK05852 221 VAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFI 300 (534)
T ss_pred EEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEE
Confidence 35789999999984 778899999988865 578999999999999999999999999998765422 2456799999
Q ss_pred EEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccc--cCCceEEEEeCCCC---C
Q psy9665 76 RCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKV--MPSMKMKVLVKSHT---M 144 (207)
Q Consensus 76 ~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~--~~~~~~~i~d~~~~---~ 144 (207)
.++|+++++++++++.+.++.. +++.||+||++..+..... .....++|.+ .++++++++|++++ +
T Consensus 301 ~~~G~~~~~~~~~~~~~~~~~~---v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~g~~~~i~d~~g~~~~~ 377 (534)
T PRK05852 301 RSCSAPLTAETAQALQTEFAAP---VVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGRSTGAQIRIVGSDGLPLPA 377 (534)
T ss_pred EECCCCCCHHHHHHHHHHhCCC---hhhccCccccchhhhcCCccccccccCcccccccCCCCCCCeEEEECCCCCCCCC
Confidence 9999999999999999999865 9999999999876554321 1112234444 69999999999887 4
Q ss_pred CCcceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 145 GSQDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 145 g~~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++.|||+|+|+.+ +.|||++++.+ +.|||.++++++|.+++.||-++.. +.+|.||++
T Consensus 378 g~~Gel~v~g~~v-~~gY~~~~~~t~~~~~~g~~~TGD~~~~d~dG~l~~~gR~~d~i--~~~G~~v~~ 443 (534)
T PRK05852 378 GAVGEVWLRGTTV-VRGYLGDPTITAANFTDGWLRTGDLGSLSAAGDLSIRGRIKELI--NRGGEKISP 443 (534)
T ss_pred CCceEEEEecCcc-cchhcCCcccchhhhcCCCcccCceEEEeCCCcEEEEecchhhE--EECCEEECH
Confidence 8899999999999 99999998665 3489999999999999999988777 457888764
No 76
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=99.95 E-value=1.2e-26 Score=198.40 Aligned_cols=197 Identities=20% Similarity=0.257 Sum_probs=165.9
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|.+|+. .++.+++.|+++++.+.+++..+++.+++++++++.++|+++..+++.......+++++|.+++||+
T Consensus 233 ~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~ 312 (547)
T PRK06087 233 MPAPLGHATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGT 312 (547)
T ss_pred EecchHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCC
Confidence 568999999987 5788899999999999999999999999999999998888777777655444567789999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
++++++.+.+.+. +.. +++.||+||++.+...... .....++|+|++++.++++|+++. +|+.|||+++|
T Consensus 313 ~~~~~~~~~~~~~-~~~---l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~Gel~v~g 388 (547)
T PRK06087 313 TIPKKVARECQQR-GIK---LLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCEGEEASRG 388 (547)
T ss_pred CCCHHHHHHHHHc-CCc---EEEEecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCcceEEEec
Confidence 9999999988764 755 9999999999877665433 234467899999999999998887 38899999999
Q ss_pred CeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.||+++++.+ +.|||.++++.+|.+.++||.++... .+|.|++.
T Consensus 389 ~~~-~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~--~~G~~v~p 445 (547)
T PRK06087 389 PNV-FMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIV--RGGENISS 445 (547)
T ss_pred ccc-cccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhh--cCCEEECH
Confidence 999 99999987543 35899999999999999999777764 56877764
No 77
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=1.1e-26 Score=196.45 Aligned_cols=198 Identities=22% Similarity=0.228 Sum_probs=168.5
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~~~~~ 78 (207)
++++|++|.+++...+.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.+.. ...+++++|.++++
T Consensus 191 l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~ 270 (502)
T PRK08276 191 LSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHA 270 (502)
T ss_pred EEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEec
Confidence 3578999999988777899999999999999999999999999999999999999999876542 34568899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCCC---CCcceEEEE
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHTM---GSQDSFVIS 153 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~---g~~Gel~i~ 153 (207)
|+++++++++++.+.++.. +++.||+||++.++..... ....+++|+|+ ++.++++|+++.+ |+.|||+++
T Consensus 271 g~~~~~~~~~~~~~~~~~~---~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~Gel~v~ 346 (502)
T PRK08276 271 AAPCPVEVKRAMIDWWGPI---IHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILDEDGNELPPGEIGTVYFE 346 (502)
T ss_pred CCCCCHHHHHHHHHHhCcH---hhhhcccccccceeEecCccccccCCCcceec-ccEEEEECCCCCCCcCCCceEEEEE
Confidence 9999999999999998855 9999999999986555433 45667899999 8899999988763 889999999
Q ss_pred cCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+.+ +.|||++++.+ +.+||..+++.++.+.+.||.++..+ .+|.|+++
T Consensus 347 ~~~~-~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~~~~~GR~~~~i~--~~G~~v~~ 404 (502)
T PRK08276 347 MDGY-PFEYHNDPEKTAAARNPHGWVTVGDVGYLDEDGYLYLTDRKSDMII--SGGVNIYP 404 (502)
T ss_pred CCCc-cchhcCCHHHHHHHhcCCCceeecceEEEcCCcCEEEeccCcceEE--eCCEEeCH
Confidence 9999 88999988543 24888888988999999999877764 47777764
No 78
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.95 E-value=2.1e-26 Score=197.42 Aligned_cols=198 Identities=19% Similarity=0.254 Sum_probs=168.9
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
..+|++|.+++. ..+..+..|+++++.. ..++..+++.++++++|++.++|++++.+.+.......+++++|.+++||
T Consensus 255 ~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg 334 (560)
T PRK08974 255 TALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGG 334 (560)
T ss_pred EeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecC
Confidence 467999999976 4677788999877765 57899999999999999999999999999887655556678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++.++++|++.++.+ +++.||+||++..+..... ....+++|+|+|+++++++|+++. +|+.|||+++|
T Consensus 335 ~~~~~~~~~~~~~~~g~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~Gel~v~g 411 (560)
T PRK08974 335 MAVQQAVAERWVKLTGQY---LLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGEPGELWVKG 411 (560)
T ss_pred ccCCHHHHHHHHHHhCCc---EEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCCceEEEEec
Confidence 999999999999988865 9999999999887766544 345678999999999999998876 48899999999
Q ss_pred CeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.||+++++.+ +.+||+.+++.++.+.++||.++... ++|.|+++
T Consensus 412 ~~~-~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~--~~G~~i~~ 467 (560)
T PRK08974 412 PQV-MLGYWQRPEATDEVIKDGWLATGDIAVMDEEGFLRIVDRKKDMIL--VSGFNVYP 467 (560)
T ss_pred CCc-chhhcCChhhhhhhhhcCCcccCCEEEEcCCceEEEEecccceEE--eCCEEECH
Confidence 999 99999987654 46999999988899999999887774 46877764
No 79
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=99.95 E-value=1.2e-26 Score=198.01 Aligned_cols=198 Identities=21% Similarity=0.277 Sum_probs=166.0
Q ss_pred cccccchHHHHH--HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCC--CCCCCCCCceeEEEE
Q psy9665 2 ALVPFFHGYGLL--LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSP--LVDQYDLSSLTNIRC 77 (207)
Q Consensus 2 ~~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~l~~lr~~~~ 77 (207)
+.+|++|.+++. .++.++..|+++++.+.+++..+++.+++++++++.++|+++..+.+.. ......++++|.+++
T Consensus 228 ~~~p~~h~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~ 307 (536)
T PRK10946 228 CALPAAHNYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQV 307 (536)
T ss_pred EecCccccccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEE
Confidence 568999998876 3778899999999998999999999999999999999999999997752 223345789999999
Q ss_pred ccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCcccccc-CCceEEEEeCCCC---CCCcceEE
Q psy9665 78 GAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVM-PSMKMKVLVKSHT---MGSQDSFV 151 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~-~~~~~~i~d~~~~---~g~~Gel~ 151 (207)
||+++++++.+++.+.++.. +++.||+||+......... .....++|+|+ |++.++++|++++ +|+.|||+
T Consensus 308 gg~~l~~~~~~~~~~~~g~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~Gel~ 384 (536)
T PRK10946 308 GGARLSETLARRIPAELGCQ---LQQVFGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEVGRLM 384 (536)
T ss_pred CCCCCCHHHHHHHHHhcCCe---EEEeecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCccEEE
Confidence 99999999999999998865 9999999997644332211 33457899999 7899999998887 48999999
Q ss_pred EEcCeeeecccccCCCcCc---------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 152 ISGDEIQFAPYCRKMSLGA---------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 152 i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++|+.+ +.|||++++.+. .|||..+.+.+|.+++.||-++.. ..+|+|+++
T Consensus 385 v~g~~~-~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i--~~~G~~v~~ 444 (536)
T PRK10946 385 TRGPYT-FRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQI--NRGGEKIAA 444 (536)
T ss_pred EecCcc-chhhcCCcccchhhcccCCceecCceEEECCCCcEEEecccccee--ecCCEEEcH
Confidence 999999 999999885542 488888898899999999988777 468888765
No 80
>PRK12582 acyl-CoA synthetase; Provisional
Probab=99.95 E-value=4.1e-27 Score=204.26 Aligned_cols=197 Identities=15% Similarity=0.155 Sum_probs=153.0
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeC-CCCHH---HHHHHHHhcCceEeeccHHHHHHHHhCCCC----CCCCCCc
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLP-HFDGH---LFLSSIEKYRVTLLPAVPPLVVFLAKSPLV----DQYDLSS 71 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~---~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~----~~~~l~~ 71 (207)
++++|++|++|+.. ++.++..|+++++.+ .+++. .+++.++++++|++.++|+++..|.+.... ...++++
T Consensus 268 l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~s 347 (624)
T PRK12582 268 LDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKN 347 (624)
T ss_pred EEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhh
Confidence 35789999999874 667899999999986 44444 456778899999999999999988754221 1235689
Q ss_pred eeEEEEccCCCCHHHHHHHHHHh----CCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCCCCC
Q psy9665 72 LTNIRCGAAPVGKSTLDQVGERL----GLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHTMGS 146 (207)
Q Consensus 72 lr~~~~~G~~~~~~~~~~~~~~~----~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~g~ 146 (207)
+|.+++||+++++++.+++++.+ +. .+.+++.||+||++.++..... ..+.+++|+|+|++++++++. |+
T Consensus 348 lr~i~~gGa~l~~~~~~~~~~~~~~~~g~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~svG~p~pg~~v~i~~~----G~ 422 (624)
T PRK12582 348 LRLMAYGGATLSDDLYERMQALAVRTTGH-RIPFYTGYGATETAPTTTGTHWDTERVGLIGLPLPGVELKLAPV----GD 422 (624)
T ss_pred eeEEEecCCCCCHHHHHHHHHHHHhhcCC-CceEEeccccccccceeecccCCCCCCCCCCcCCCCcEEEEccC----CC
Confidence 99999999999999999999863 31 1148999999999877664333 456789999999999999743 67
Q ss_pred cceEEEEcCeeeecccccCCCcCc---------ccCCcEEE-c---CeeEEEEEecCccccccccCCCccc
Q psy9665 147 QDSFVISGDEIQFAPYCRKMSLGA---------YLCHWLKL-K---GKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 147 ~Gel~i~g~~~~~~gy~~~~~~~~---------~~~d~~~~-~---~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
.|||+|+|+.+ +.|||++|+.+. .|||..++ + .+|.+.+.||.++..+. -+|+||+
T Consensus 423 ~GEl~vrg~~v-~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~-~~G~~i~ 491 (624)
T PRK12582 423 KYEVRVKGPNV-TPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKL-STGTWVS 491 (624)
T ss_pred ceEEEEECCcc-cccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEec-CCCcEec
Confidence 89999999999 999999997653 47887887 3 24788999987766531 2466665
No 81
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=99.95 E-value=2.7e-26 Score=200.17 Aligned_cols=197 Identities=15% Similarity=0.107 Sum_probs=162.2
Q ss_pred ccccchHHHHHHHHHHHHhCCeEEEeC----CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC--CCCCCCCceeEEE
Q psy9665 3 LVPFFHGYGLLLMLQAICMNNKLVVLP----HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL--VDQYDLSSLTNIR 76 (207)
Q Consensus 3 ~~Pl~h~~g~~~~~~~l~~G~~~v~~~----~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--~~~~~l~~lr~~~ 76 (207)
+.|+.|+.+. .++.+++.|+++++.+ .+++..++++++++++|++..+|++++.+.+... ....++++||.++
T Consensus 311 ~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~ 389 (655)
T PRK03584 311 YTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIG 389 (655)
T ss_pred cCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEE
Confidence 4566676542 4668899999999986 2489999999999999999999999999877532 2346788999999
Q ss_pred EccCCCCHHHHHHHHHHhC-CCcCcceeccccccccceeeccC-C-CCCCCccccccCCceEEEEeCCCCC--CCcceEE
Q psy9665 77 CGAAPVGKSTLDQVGERLG-LSMDSMKQGYGMTELTILVTFSD-L-DVPSSSVGKVMPSMKMKVLVKSHTM--GSQDSFV 151 (207)
Q Consensus 77 ~~G~~~~~~~~~~~~~~~~-~~~~~i~~~YG~tE~g~~~~~~~-~-~~~~~~~G~~~~~~~~~i~d~~~~~--g~~Gel~ 151 (207)
++|+++++++++++.+.++ .. .+.+.||+||++....... . ....+++|.|.++++++|+|++|.+ ++.|||+
T Consensus 390 ~~Ge~l~~~~~~~~~~~~~~~~--~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~~g~~GeL~ 467 (655)
T PRK03584 390 STGSPLPPEGFDWVYEHVKADV--WLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPVVGEVGELV 467 (655)
T ss_pred EecCCCCHHHHHHHHHHhCCCc--eEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCCCCCceEEE
Confidence 9999999999999999985 23 5999999999865543322 2 4566889999999999999999874 8999999
Q ss_pred EEcC--eeeecccccCCCcC-------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 152 ISGD--EIQFAPYCRKMSLG-------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 152 i~g~--~~~~~gy~~~~~~~-------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+++ .+ +.|||++++.+ +++||+.+++.+|.++++||.+++. +.+|.||+.
T Consensus 468 v~gp~p~~-~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~I--k~~G~rI~p 533 (655)
T PRK03584 468 CTKPFPSM-PLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATL--NRGGVRIGT 533 (655)
T ss_pred EccCCCCC-cceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCee--ecCcEEECH
Confidence 9996 57 89999998643 2479999999999999999988877 578888864
No 82
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=99.95 E-value=6.1e-27 Score=202.75 Aligned_cols=200 Identities=18% Similarity=0.238 Sum_probs=155.7
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeC--CC--CHHHHHHHHH--hcCceEeeccHHHHHHHHhCCC----CCCCCCC
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLP--HF--DGHLFLSSIE--KYRVTLLPAVPPLVVFLAKSPL----VDQYDLS 70 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~--~~--~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~----~~~~~l~ 70 (207)
++++|++|.+|+...+.+++.|+++++.. .+ +|..+++.++ +++++++..+|+++..++.... ....+++
T Consensus 239 l~~~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~ 318 (612)
T PRK12476 239 VSWLPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLS 318 (612)
T ss_pred EEeCCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchh
Confidence 36789999999986666655666666654 24 8999999995 5899999999999888776421 1244678
Q ss_pred ceeEEEEccCCCCHHHHHHHHHHh---CCCcCcceeccccccccceeeccCCC---------------------------
Q psy9665 71 SLTNIRCGAAPVGKSTLDQVGERL---GLSMDSMKQGYGMTELTILVTFSDLD--------------------------- 120 (207)
Q Consensus 71 ~lr~~~~~G~~~~~~~~~~~~~~~---~~~~~~i~~~YG~tE~g~~~~~~~~~--------------------------- 120 (207)
++| +++||+++++++++++++.| +.+...+++.||+||++..+......
T Consensus 319 ~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 397 (612)
T PRK12476 319 NVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPN 397 (612)
T ss_pred Hhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCC
Confidence 999 99999999999999999988 33222589999999987654432110
Q ss_pred -CCCCccccccCCceEEEEeCC-CC---CCCcceEEEEcCeeeecccccCCCcC--------------------------
Q psy9665 121 -VPSSSVGKVMPSMKMKVLVKS-HT---MGSQDSFVISGDEIQFAPYCRKMSLG-------------------------- 169 (207)
Q Consensus 121 -~~~~~~G~~~~~~~~~i~d~~-~~---~g~~Gel~i~g~~~~~~gy~~~~~~~-------------------------- 169 (207)
...+++|+|+++++++|+|++ ++ +|+.|||+++|+.+ +.|||++|+.+
T Consensus 398 ~~~~~~~G~~~~g~~v~ivd~~~g~~~~~g~~GEl~v~g~~v-~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~ 476 (612)
T PRK12476 398 AVAHVSCGQVARSQWAVIVDPDTGAELPDGEVGEIWLHGDNI-GRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGT 476 (612)
T ss_pred cceeEeCCCcCCCCEEEEEeCCCCcCCCCCCEEEEEEcCCcc-cccccCChHHHHHHHhhhhccccccccccccccCCCC
Confidence 012478999999999999988 66 48899999999999 99999988543
Q ss_pred -cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 170 -AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 170 -~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
..|||+.++. +|.++++||.++.+ +++|+||+.
T Consensus 477 w~~TGDlg~~~-dG~l~i~GR~~d~I--~~~G~~I~p 510 (612)
T PRK12476 477 WLRTGDLGVYL-DGELYITGRIADLI--VIDGRNHYP 510 (612)
T ss_pred eeeccccceeE-CCEEEEEeccCcEE--EECCcccCH
Confidence 2377777764 79999999998888 558999875
No 83
>PRK13391 acyl-CoA synthetase; Provisional
Probab=99.95 E-value=3.3e-26 Score=194.14 Aligned_cols=196 Identities=21% Similarity=0.247 Sum_probs=165.7
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCC--CCCCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLV--DQYDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~~lr~~~~~G 79 (207)
+.+|++|.+++...+.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.... ...+++++|.+++||
T Consensus 205 ~~~p~~h~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg 284 (511)
T PRK13391 205 SPAPLYHSAPQRAVMLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAA 284 (511)
T ss_pred EcCCHHHHHHHHHHHHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEcc
Confidence 467999999988788899999999999999999999999999999999999999988765432 235678999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG 154 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g 154 (207)
+++++++++++++.++.. +++.||+||++.+...... ...++++|+|+++ .++++|+++. +|+.|||++++
T Consensus 285 ~~~~~~~~~~~~~~~g~~---v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~Gel~~~g 360 (511)
T PRK13391 285 APCPPQVKEQMIDWWGPI---IHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEPGTIWFEG 360 (511)
T ss_pred CCCCHHHHHHHHHHcCCc---eeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCceEEEEec
Confidence 999999999999988855 9999999999877655433 3566799999999 6899998887 37889999999
Q ss_pred CeeeecccccCCCcC----------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 DEIQFAPYCRKMSLG----------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 ~~~~~~gy~~~~~~~----------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+ + +.|||++++.+ +.|||+.+++.++.++++||.++..+ .+|.|+++
T Consensus 361 ~-~-~~gy~~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~--~~G~~v~~ 417 (511)
T PRK13391 361 G-R-PFEYLNDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMII--SGGVNIYP 417 (511)
T ss_pred C-c-ceEEcCChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEE--eCCEEECH
Confidence 9 6 78999987543 23888888888999999999877774 57777753
No 84
>KOG1256|consensus
Probab=99.94 E-value=7.3e-27 Score=196.80 Aligned_cols=192 Identities=19% Similarity=0.246 Sum_probs=157.4
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhC-------------------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKS------------------- 61 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------- 61 (207)
+++|||.|++..++-...++.|+++.+.+ -|+..+.+.+++.++|.+.++|.++.++.+.
T Consensus 306 lSyLPLAHi~er~~~~~~~~~G~~IgF~~-gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A 384 (691)
T KOG1256|consen 306 LSYLPLAHIFERVVELYTFYIGAKIGFAR-GDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFA 384 (691)
T ss_pred EEeCcHHHHHHHHHHHhHhhcccEEEEec-CChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 47899999999998777779999999996 7888888899999999999999999887541
Q ss_pred ------CCC-CCCC-------------------CCceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceee
Q psy9665 62 ------PLV-DQYD-------------------LSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVT 115 (207)
Q Consensus 62 ------~~~-~~~~-------------------l~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~ 115 (207)
... .... -.++|.+++|++|+++++...++..+++. ++++||+|||.+.++
T Consensus 385 ~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~---v~eGYGlTEts~g~~ 461 (691)
T KOG1256|consen 385 MAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCR---VLEGYGLTETSAGTT 461 (691)
T ss_pred HHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCce---eeecccccccCCceE
Confidence 000 0000 13789999999999999999999998886 999999999985544
Q ss_pred ccCC-CCCCCccccccCCceEEEEeCCCC----CCCcceEEEEcCeeeecccccCCCcCcc---------cCCcEEEcCe
Q psy9665 116 FSDL-DVPSSSVGKVMPSMKMKVLVKSHT----MGSQDSFVISGDEIQFAPYCRKMSLGAY---------LCHWLKLKGK 181 (207)
Q Consensus 116 ~~~~-~~~~~~~G~~~~~~~~~i~d~~~~----~g~~Gel~i~g~~~~~~gy~~~~~~~~~---------~~d~~~~~~~ 181 (207)
.... +...+++|.|+|+++++++|...- .+..|||+|||+++ |.||+++|+.|.. |||..+++.+
T Consensus 462 ~~~~~d~~lgsvG~p~p~~~vKL~dvpe~ny~a~~~~GEIcirG~~V-f~GYyK~p~~T~e~ideDGWLhTGDiG~~~p~ 540 (691)
T KOG1256|consen 462 LTLPGDNVLGSVGPPVPGNEVKLVDVPEMNYDADGSKGEICVRGPNV-FMGYYKDPEKTAEAIDEDGWLHTGDIGEWDPN 540 (691)
T ss_pred eccCCCCCCCCcCCcccCceEEEechHHhCcCcCCCcceEEEecchh-ceeccCChHHHhhhhccccccccccceeECCC
Confidence 4444 568999999999999999875432 35679999999999 9999999998874 6666666778
Q ss_pred eEEEEEecCccccccc
Q psy9665 182 QTVLVLGFGSQSCEEN 197 (207)
Q Consensus 182 ~~~~i~grg~~~~~~~ 197 (207)
|.+.|.+|.+++.+--
T Consensus 541 G~l~IidRkK~ifkla 556 (691)
T KOG1256|consen 541 GTLKIIDRKKNIFKLA 556 (691)
T ss_pred ccEEEEecccceEEcC
Confidence 8999999977776554
No 85
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.94 E-value=1.7e-26 Score=214.29 Aligned_cols=198 Identities=17% Similarity=0.191 Sum_probs=168.0
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC---CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCC--CCCCCceeEEE
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP---HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVD--QYDLSSLTNIR 76 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~~~ 76 (207)
+..|++|..+++.++.+++.|+++++.+ ..+|..+++.++++++|++.++|+++..+++..... ...++++|.++
T Consensus 644 ~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~ 723 (1296)
T PRK10252 644 QKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVF 723 (1296)
T ss_pred EeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEE
Confidence 4678999999888899999999999986 458999999999999999999999999988764322 23467899999
Q ss_pred EccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C-------CCCCccccccCCceEEEEeCCCC---CC
Q psy9665 77 CGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D-------VPSSSVGKVMPSMKMKVLVKSHT---MG 145 (207)
Q Consensus 77 ~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~-------~~~~~~G~~~~~~~~~i~d~~~~---~g 145 (207)
+||+++++++.++|++.++.. ++|.||+||++..++..+. . ....++|+|+++++++|+|++++ +|
T Consensus 724 ~gGe~l~~~~~~~~~~~~~~~---l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g 800 (1296)
T PRK10252 724 CSGEALPADLCREWQQLTGAP---LHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPG 800 (1296)
T ss_pred EecCCCCHHHHHHHHhcCCCE---EEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCC
Confidence 999999999999999887755 9999999999876655433 1 23457999999999999998887 48
Q ss_pred CcceEEEEcCeeeecccccCCCcC---------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 146 SQDSFVISGDEIQFAPYCRKMSLG---------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 146 ~~Gel~i~g~~~~~~gy~~~~~~~---------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||+|+|+.+ +.||+++|+.+ ++|||..+++.+|.+.++||.++.. +++|.||++
T Consensus 801 ~~Gel~i~g~~~-~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~i--k~~G~ri~~ 872 (1296)
T PRK10252 801 VAGDLYLTGIQL-AQGYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQL--KIRGQRIEL 872 (1296)
T ss_pred CceEEEeccccc-chhhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeE--EEeeEEecH
Confidence 999999999999 99999998754 3489999999999999999988776 558888875
No 86
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=99.94 E-value=3.8e-26 Score=199.08 Aligned_cols=199 Identities=11% Similarity=0.060 Sum_probs=160.2
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC--C--CCHHHHHHHHHhcCceEeeccHHHHHHHHhCC--CCCCCCCCceeEE
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP--H--FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSP--LVDQYDLSSLTNI 75 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~--~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~l~~lr~~ 75 (207)
++.|+.|+++ ..++.+++.|+++++++ + .++..++++++++++|++..+|++++.+.+.. .....++++||.+
T Consensus 311 ~~~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i 389 (652)
T TIGR01217 311 YYTTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCV 389 (652)
T ss_pred EeCCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEE
Confidence 4567888753 23558899999999986 2 27899999999999999988888887776532 1234678999999
Q ss_pred EEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeecc-CC-CCCCCccccccCCceEEEEeCCCCC--CCcceEE
Q psy9665 76 RCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFS-DL-DVPSSSVGKVMPSMKMKVLVKSHTM--GSQDSFV 151 (207)
Q Consensus 76 ~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~-~~-~~~~~~~G~~~~~~~~~i~d~~~~~--g~~Gel~ 151 (207)
+++|+++++++++++.+.++.. ..+.+.||+||++...... +. ....+++|.|.++++++++|++|++ |+.|||+
T Consensus 390 ~~gGe~l~~~~~~~~~~~~~~~-~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~~g~~GEl~ 468 (652)
T TIGR01217 390 ASTGSPLPPDGFRWVYDEIKAD-VWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPVTGEVGELV 468 (652)
T ss_pred EeecCCCCHHHHHHHHHHhCCC-ceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCCCCCccEEE
Confidence 9999999999999999988632 2467899999975443322 22 4456789999999999999999884 8999999
Q ss_pred EEcC--eeeecccccCCCcC-------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 152 ISGD--EIQFAPYCRKMSLG-------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 152 i~g~--~~~~~gy~~~~~~~-------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+++| .+ +.|||++++.+ +++||+.+++.+|.++++||.+++. +.+|.||+.
T Consensus 469 v~gp~p~~-~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I--~~~G~ri~p 534 (652)
T TIGR01217 469 CTNPMPSM-PIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTL--NPQGVRMGS 534 (652)
T ss_pred EecCCCcc-ccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeE--ecCCEEcCH
Confidence 9997 46 89999999743 3479999999999999999988777 679999874
No 87
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.94 E-value=3.9e-26 Score=196.40 Aligned_cols=198 Identities=17% Similarity=0.169 Sum_probs=164.2
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++.+|++|.+++...+.++..|+++++.+ .+++..+++.++++++++++++|+++..++........+..++|.++++|
T Consensus 228 l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG 307 (576)
T PRK05620 228 LCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGG 307 (576)
T ss_pred EEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcC
Confidence 36789999999888888999999999886 68999999999999999999999999988765432333446899999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C--------CCCCccccccCCceEEEEeCCCC-----CC
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D--------VPSSSVGKVMPSMKMKVLVKSHT-----MG 145 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~--------~~~~~~G~~~~~~~~~i~d~~~~-----~g 145 (207)
++++++++++|.+.++.+ +++.||+||++........ . ....++|++.++++++++|+ +. ++
T Consensus 308 ~~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~ 383 (576)
T PRK05620 308 SAVPPILIKAWEERYGVD---VVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDR 383 (576)
T ss_pred CCCCHHHHHHHHHHhCCc---eeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCC
Confidence 999999999999998865 9999999999876554322 1 11247899999999999997 54 25
Q ss_pred CcceEEEEcCeeeecccccCCCcC-------------------------cccCCcEEEcCeeEEEEEecCccccccccCC
Q psy9665 146 SQDSFVISGDEIQFAPYCRKMSLG-------------------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 146 ~~Gel~i~g~~~~~~gy~~~~~~~-------------------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~ 200 (207)
+.|||+++|+.+ +.|||++++.+ +.+||..+++.+|.+.+.||.++... .+|
T Consensus 384 ~~Gel~v~g~~~-~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~--~~G 460 (576)
T PRK05620 384 NEGEIQVRGNWV-TASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIR--SGG 460 (576)
T ss_pred CceEEEEEcCcc-cccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhh--cCC
Confidence 789999999999 99999998765 35889999999999999999777664 578
Q ss_pred Ccccc
Q psy9665 201 DNISL 205 (207)
Q Consensus 201 ~~~s~ 205 (207)
+||+.
T Consensus 461 ~~i~~ 465 (576)
T PRK05620 461 EWIYS 465 (576)
T ss_pred EEEcH
Confidence 87764
No 88
>PRK12316 peptide synthase; Provisional
Probab=99.94 E-value=1.7e-26 Score=232.44 Aligned_cols=198 Identities=19% Similarity=0.221 Sum_probs=170.7
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeC---CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEE
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLP---HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRC 77 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~ 77 (207)
+..+|++|..+++.++.+++.|+++++.+ .+++..+++.++++++|++.++|++++.|.+... ..+++++|.+++
T Consensus 700 l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l~~~~~ 777 (5163)
T PRK12316 700 LQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSLRRIVC 777 (5163)
T ss_pred EeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCccEEEE
Confidence 35789999999988999999999999986 4799999999999999999999999999987643 345789999999
Q ss_pred ccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCCC---CCcceEE
Q psy9665 78 GAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHTM---GSQDSFV 151 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~---g~~Gel~ 151 (207)
||+++++++.+++.+.++.. +++|.||+||++..++.... .....++|+|+++++++|+|+++++ |+.|||+
T Consensus 778 gGe~l~~~~~~~~~~~~~~~--~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~GEl~ 855 (5163)
T PRK12316 778 SGEALPADAQEQVFAKLPQA--GLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVLGELY 855 (5163)
T ss_pred eeccCCHHHHHHHHHhCCCC--eEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCceEEE
Confidence 99999999999998887755 69999999999855443322 4456689999999999999998873 8999999
Q ss_pred EEcCeeeecccccCCCcCc---------------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 152 ISGDEIQFAPYCRKMSLGA---------------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 152 i~g~~~~~~gy~~~~~~~~---------------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+|+.+ +.||+++|+.+. +|||.++.+.+|.+.++||.++.. .++|+||++
T Consensus 856 i~G~~v-~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~i--k~~G~rI~~ 921 (5163)
T PRK12316 856 LAGRGL-ARGYHGRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQV--KLRGLRIEL 921 (5163)
T ss_pred eccccc-ChhhCCChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEE--EEceEEcCh
Confidence 999999 999999986542 488999999999999999988877 458999876
No 89
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=99.94 E-value=4.4e-26 Score=193.52 Aligned_cols=197 Identities=18% Similarity=0.234 Sum_probs=164.8
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|..++. .++.++..|+++++.+++++..+++.++++++|++.++|++++.+...+.........+|.+.++ .
T Consensus 219 ~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~ 297 (517)
T PRK08008 219 TVMPAFHIDCQCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-L 297 (517)
T ss_pred EecCcHHHHHHHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-c
Confidence 567999988776 47888999999999999999999999999999999999999999987654433344678887775 4
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCC---CCCcceEEEEc-
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISG- 154 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g- 154 (207)
+++++.++++.+.++.. +++.||+||++..++.... .....++|+|+++++++++|++++ +|+.|||+++|
T Consensus 298 ~~~~~~~~~~~~~~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~Gel~v~g~ 374 (517)
T PRK08008 298 NLSDQEKDAFEERFGVR---LLTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEIGEICIKGV 374 (517)
T ss_pred CCCHHHHHHHHHHhCCe---EEeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCcceEEEeCC
Confidence 89999999999998865 9999999999866554433 445678999999999999998887 38899999998
Q ss_pred --CeeeecccccCCCcCc---------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 155 --DEIQFAPYCRKMSLGA---------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 155 --~~~~~~gy~~~~~~~~---------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.+ +.|||++++.+. .+||..+.++++.+++.||.++..+ .+|+||++
T Consensus 375 ~~~~~-~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~--~~G~~i~p 433 (517)
T PRK08008 375 PGKTI-FKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIK--RGGENVSC 433 (517)
T ss_pred CCcch-hhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEE--eCCEEECH
Confidence 577 999999986643 4888889999999999999888874 57888765
No 90
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=99.94 E-value=1.8e-26 Score=193.30 Aligned_cols=190 Identities=22% Similarity=0.261 Sum_probs=152.8
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
++++|++|.+|+..++.+++.|+++++.+............++++++++++|++++.+.+.. ..+++++|.+++||+
T Consensus 164 ~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~ 240 (452)
T PRK07445 164 FCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGA 240 (452)
T ss_pred EeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceEEEehHHHHHHHHhhC---hhhhhcceEEEECCc
Confidence 36789999999988889999999999987432222233445788999999999999998732 335789999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCee
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEI 157 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~ 157 (207)
++++++.+++++ ++.. +++.||+||++..+..... .....++|+|+|+++++|+ +++.|||+|+|+.+
T Consensus 241 ~l~~~~~~~~~~-~~~~---l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~-----~g~~Gel~v~g~~~ 311 (452)
T PRK07445 241 PAWPSLLEQARQ-LQLR---LAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIP-----ANQTGNITIQAQSL 311 (452)
T ss_pred cCCHHHHHHHHh-cCCe---EecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEc-----CCCcceEEEeCCcc
Confidence 999999998875 4654 9999999999765443322 2345689999999999998 35789999999999
Q ss_pred eecccccCCCc--C-cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 158 QFAPYCRKMSL--G-AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 158 ~~~gy~~~~~~--~-~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||+++.. + +.|||+.+++.+|.+.+.||.++.. +.+|+||+.
T Consensus 312 -~~gY~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~I--~~~G~~V~p 359 (452)
T PRK07445 312 -ALGYYPQILDSQGIFETDDLGYLDAQGYLHILGRNSQKI--ITGGENVYP 359 (452)
T ss_pred -chhhcCCccCCCCEEECCCEEEEcCCCCEEEEeecCCEE--EECCEEECH
Confidence 9999987632 2 4699999999999999999988877 468999874
No 91
>PLN03052 acetate--CoA ligase; Provisional
Probab=99.94 E-value=5.4e-26 Score=199.85 Aligned_cols=200 Identities=15% Similarity=0.065 Sum_probs=162.8
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCC-CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPH-FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
++.|+.|+++.+.++.+|..|+++++++. +++..+++.++++++|++..+|++++.|.+.......++++||.++++|+
T Consensus 402 ~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge 481 (728)
T PLN03052 402 WPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGE 481 (728)
T ss_pred ECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCC
Confidence 46789999998778899999999999974 56678999999999999999999999998876445678899999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCCC---C--CcceEEEE
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHTM---G--SQDSFVIS 153 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~---g--~~Gel~i~ 153 (207)
+++++...++.+.++.. .+.+.||+||++..+..... ....+++|.|.++++++|+|++|++ | +.|||+++
T Consensus 482 ~l~~~~~~~~~~~~~~~--~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~ 559 (728)
T PLN03052 482 ASSVDDYLWLMSRAGYK--PIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF 559 (728)
T ss_pred CCCHHHHHHHHHhcCCC--CeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence 99999999988887754 58999999999866544322 4456789999999999999999884 4 36999998
Q ss_pred cCeee-e---------cccccC-CCc----CcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 154 GDEIQ-F---------APYCRK-MSL----GAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 154 g~~~~-~---------~gy~~~-~~~----~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++... . ..||.. |.. -+++||+++++.+|.++++||.+++. +.+|.||+.
T Consensus 560 ~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I--~~~G~rI~~ 624 (728)
T PLN03052 560 PLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTM--NLGGIKVSS 624 (728)
T ss_pred CCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEE--eeCCEEeCH
Confidence 65321 1 235532 211 24699999999999999999988777 779998874
No 92
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=7.9e-26 Score=207.68 Aligned_cols=196 Identities=19% Similarity=0.341 Sum_probs=166.7
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
++.+|++|.+++. .++.++..|+++++.+ .+++..+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|
T Consensus 838 l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~g 915 (1140)
T PRK06814 838 FNALPVFHSFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAG 915 (1140)
T ss_pred EEecchHHHHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEc
Confidence 3578999999985 5888899999999987 467888999999999999999999999987753 24567899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCee
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEI 157 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~ 157 (207)
|+++++++.+++.+.++.. +++.||+||++..+..... ..+.+++|+|+|++++++++.++ .++.|||+++|+.+
T Consensus 916 g~~l~~~~~~~~~~~~~~~---~~~~YG~TE~~~~~~~~~~~~~~~~~vG~p~~g~~~~~~~~~~-~~~~Gel~v~g~~~ 991 (1140)
T PRK06814 916 AEKVKEETRQTWMEKFGIR---ILEGYGVTETAPVIALNTPMHNKAGTVGRLLPGIEYRLEPVPG-IDEGGRLFVRGPNV 991 (1140)
T ss_pred CCcCCHHHHHHHHHHhCCc---EEeccccccccceEEecCCCCCCCCcCCccCCCCeEEEeecCC-CCCceEEEEeCCCc
Confidence 9999999999999998865 9999999999887665544 55678999999999999988664 36789999999999
Q ss_pred eecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 158 QFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 158 ~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||++++.. +.|||..+++++|.+++.||.++.. +.+|+||+.
T Consensus 992 -~~gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i--~~~G~~v~~ 1045 (1140)
T PRK06814 992 -MLGYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFA--KIAGEMISL 1045 (1140)
T ss_pred -chhhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCee--eeCCEEECH
Confidence 99999875321 2489999999999999999988777 458888874
No 93
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.94 E-value=2.6e-26 Score=214.26 Aligned_cols=196 Identities=15% Similarity=0.120 Sum_probs=164.6
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCC---CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPH---FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
...|++|..++..++.+++.|+++++.+. .++..+++.++++++|+++++|++++.|.... ...++++|.+++|
T Consensus 461 ~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~g 537 (1389)
T TIGR03443 461 MLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSLHHAFFV 537 (1389)
T ss_pred EecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCccEEEEe
Confidence 45789999988889999999999999874 36889999999999999999999999987543 2357899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---C---------CCCCccccccCCceEEEEeCCCC---
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---D---------VPSSSVGKVMPSMKMKVLVKSHT--- 143 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~---------~~~~~~G~~~~~~~~~i~d~~~~--- 143 (207)
|++++++..+++.+.++.. +++|.||+||++..+..... . ....++|+|+++++++|+|+++.
T Consensus 538 Ge~l~~~~~~~~~~~~~~~--~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~ 615 (1389)
T TIGR03443 538 GDILTKRDCLRLQTLAENV--CIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRNDRTQT 615 (1389)
T ss_pred cccCCHHHHHHHHHhCCCC--EEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCccCCCc
Confidence 9999999999998877655 79999999999876554321 1 12357899999999999997653
Q ss_pred --CCCcceEEEEcCeeeecccccCCCcC-------------------------------------cccCCcEEEcCeeEE
Q psy9665 144 --MGSQDSFVISGDEIQFAPYCRKMSLG-------------------------------------AYLCHWLKLKGKQTV 184 (207)
Q Consensus 144 --~g~~Gel~i~g~~~~~~gy~~~~~~~-------------------------------------~~~~d~~~~~~~~~~ 184 (207)
+|+.|||+|+|+.+ +.|||++|+.+ ++|||.++++.+|.+
T Consensus 616 ~~~G~~GEL~i~G~~v-~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l 694 (1389)
T TIGR03443 616 CGVGEVGEIYVRAGGL-AEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNV 694 (1389)
T ss_pred CCCCCceEEEeccccc-chhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCE
Confidence 48999999999999 99999977533 358888899989999
Q ss_pred EEEecCccccccccCCCcccc
Q psy9665 185 LVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 185 ~i~grg~~~~~~~~~~~~~s~ 205 (207)
.+.||.++..+ ++|+||++
T Consensus 695 ~~~GR~dd~Ik--i~G~rI~p 713 (1389)
T TIGR03443 695 ECCGRADDQVK--IRGFRIEL 713 (1389)
T ss_pred EEecccCCEEE--eCcEEecH
Confidence 99999988886 58999876
No 94
>PRK06164 acyl-CoA synthetase; Validated
Probab=99.94 E-value=6.6e-26 Score=193.44 Aligned_cols=197 Identities=18% Similarity=0.203 Sum_probs=161.0
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc-
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA- 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G- 79 (207)
++++|++|++|+..++.++..|+++++.+.+++..+++.++++++|+++++|+++..+.+.. ....+++++|.+.+++
T Consensus 226 l~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~ 304 (540)
T PRK06164 226 LAALPFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASF 304 (540)
T ss_pred EEcCCchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccC
Confidence 35789999999988899999999999999999999999999999999999999999998872 2355788999887766
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC----CCCCCcccccc-CCceEEEEeCCC-C---CCCcceE
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL----DVPSSSVGKVM-PSMKMKVLVKSH-T---MGSQDSF 150 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----~~~~~~~G~~~-~~~~~~i~d~~~-~---~g~~Gel 150 (207)
.+...++.+++.+. +.. +++.||+||++..+..... .......|.|. +++.++++|+++ + +|+.|||
T Consensus 305 ~~~~~~~~~~~~~~-~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~Gel 380 (540)
T PRK06164 305 APALGELAALARAR-GVP---LTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGESGEI 380 (540)
T ss_pred CcchHHHHHHHhhc-CCc---eecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCeeEE
Confidence 56667777777655 654 9999999999877665443 22334567775 889999999643 3 4889999
Q ss_pred EEEcCeeeecccccCCCcC---------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 151 VISGDEIQFAPYCRKMSLG---------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 151 ~i~g~~~~~~gy~~~~~~~---------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
||+|+.+ +.||+++++.+ +.|||..++++++.+.+.||-++.. +.+|.+|++
T Consensus 381 ~v~g~~~-~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i--~~~G~~i~p 441 (540)
T PRK06164 381 EIRAPSL-MRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSL--RLGGFLVNP 441 (540)
T ss_pred EEecccc-cccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeE--EECCEEcCH
Confidence 9999999 99999998654 3489999999999999999977776 447888764
No 95
>PRK12316 peptide synthase; Provisional
Probab=99.94 E-value=4.1e-26 Score=229.67 Aligned_cols=199 Identities=18% Similarity=0.199 Sum_probs=170.9
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCC--CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPH--FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
++++|++|..+...++.++..|+++++.+. +++..+++.++++++|+++++|++++.+.+..... .+++++|.+++|
T Consensus 4739 l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~-~~~~~lr~v~~g 4817 (5163)
T PRK12316 4739 LQFMSFSFDGSHEGLYHPLINGASVVIRDDSLWDPERLYAEIHEHRVTVLVFPPVYLQQLAEHAERD-GEPPSLRVYCFG 4817 (5163)
T ss_pred EEecCcchhhHHHHHHHHHhCCCEEEEcCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhccc-cCCCCccEEEEe
Confidence 357899999998889999999999999873 38999999999999999999999999998765432 267899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccccCCceEEEEeCCCC---CCCcce
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDS 149 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Ge 149 (207)
|+++++++.+++.+.++.. ++++.||+||++..++.... .....++|+|+++++++|+|++++ +|++||
T Consensus 4818 Ge~l~~~~~~~~~~~~~~~--~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~g~~GE 4895 (5163)
T PRK12316 4818 GEAVAQASYDLAWRALKPV--YLFNGYGPTETTVTVLLWKARDGDACGAAYMPIGTPLGNRSGYVLDGQLNPLPVGVAGE 4895 (5163)
T ss_pred cccCCHHHHHHHHHhCCCC--EEEecccCccceEEEEEEEcccccccCCCCCcccccccCCEEEEECCCCCcCCCCCCce
Confidence 9999999999988887655 69999999999887665433 134568999999999999998887 389999
Q ss_pred EEEEcCeeeecccccCCCcC----------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQFAPYCRKMSLG----------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~~~gy~~~~~~~----------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+|+|+.+ +.|||++|+.+ ++|||.++++++|.+.+.||.++.. .++|.||++
T Consensus 4896 l~i~G~~v-~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~i--ki~G~ri~~ 4964 (5163)
T PRK12316 4896 LYLGGEGV-ARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRADGVIDYLGRVDHQV--KIRGFRIEL 4964 (5163)
T ss_pred EEECCccc-chhhcCChhhhhhhccCCCCCCCCcceeecCceeEECCCCcEEEeccccceE--eeccEeecH
Confidence 99999999 99999998654 3489999999999999999988776 558888875
No 96
>PRK06178 acyl-CoA synthetase; Validated
Probab=99.94 E-value=1.5e-25 Score=192.45 Aligned_cols=200 Identities=21% Similarity=0.242 Sum_probs=164.8
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc-
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG- 78 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~- 78 (207)
++++|++|++|+. .++.++..|+++++.+++++..+++.+++++++.+.++|.++..+++.+.....+++++|.+..+
T Consensus 255 l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~ 334 (567)
T PRK06178 255 LSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVS 334 (567)
T ss_pred EEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeecc
Confidence 3578999999986 58888999999999999999999999999999999999999999988765555667788886544
Q ss_pred -cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--------CCCCCccccccCCceEEEEeC-CCC---CC
Q psy9665 79 -AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--------DVPSSSVGKVMPSMKMKVLVK-SHT---MG 145 (207)
Q Consensus 79 -G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--------~~~~~~~G~~~~~~~~~i~d~-~~~---~g 145 (207)
++++++++.+.+++.++.. .+.+.||+||++........ ...+.++|+|+|+++++++|+ +++ .|
T Consensus 335 ~~~~~~~~~~~~~~~~~g~~--~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g 412 (567)
T PRK06178 335 FVKKLNPDYRQRWRALTGSV--LAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLG 412 (567)
T ss_pred ccccCCHHHHHHHHHHhCCc--ccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCC
Confidence 5899999999999999876 34457999998765443321 124467999999999999994 454 48
Q ss_pred CcceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 146 SQDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 146 ~~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||+++|+.+ +.|||++++.+ +.|||..++++++.++++||.++.... +|.||+.
T Consensus 413 ~~Gel~v~g~~v-~~gY~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~--~G~~i~~ 477 (567)
T PRK06178 413 AEGEIVVRTPSL-LKGYWNKPEATAEALRDGWLHTGDIGKIDEQGFLHYLGRRKEMLKV--NGMSVFP 477 (567)
T ss_pred CceEEEEECCcc-cccccCChhhhhhcccCCceeecceEEEecCCeEEEEecccccEEE--CCEEECH
Confidence 899999999999 99999998654 348898899889999999998888744 7888763
No 97
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=99.94 E-value=1.6e-25 Score=189.18 Aligned_cols=198 Identities=18% Similarity=0.225 Sum_probs=166.6
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCC---CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPH---FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
+.+|++|..++..++.++..|+++++.++ +++..+++.+++++++.+..+|+++..+.........+++++|.++++
T Consensus 189 ~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~ 268 (503)
T PRK04813 189 NQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFC 268 (503)
T ss_pred ecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEe
Confidence 56899999998778899999999999884 589999999999999999999999988776654445678899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccccCCceEEEEeCCCC---CCCcce
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDS 149 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Ge 149 (207)
|+++++++.+++++.++.. .+++.||+||++..+..... .....++|++.++++++|+|+++. +++.||
T Consensus 269 G~~l~~~~~~~~~~~~~~~--~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~Ge 346 (503)
T PRK04813 269 GEELPHKTAKKLLERFPSA--TIYNTYGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQGE 346 (503)
T ss_pred cCcCCHHHHHHHHHHCCCc--eEEeCcccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCceE
Confidence 9999999999999999655 69999999999765544322 234557999999999999999887 388999
Q ss_pred EEEEcCeeeecccccCCCcC------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQFAPYCRKMSLG------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~~~gy~~~~~~~------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+++++.+ +.|||++++.+ +.+||..++ .++.+.+.||.++.. +.+|.|+++
T Consensus 347 l~v~~~~~-~~gy~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i--~~~G~~v~~ 410 (503)
T PRK04813 347 IVISGPSV-SKGYLNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQI--KLNGYRIEL 410 (503)
T ss_pred EEEecccc-ccccCCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceE--EECcEEeCH
Confidence 99999999 99999987533 248888888 789999999987776 557888875
No 98
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=99.94 E-value=1.5e-25 Score=191.45 Aligned_cols=197 Identities=20% Similarity=0.274 Sum_probs=164.5
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
..+|++|.+++...+.++..|+++++.. .++++.+++.++++++|++.++|+++..+.+.......+++++|.++++|+
T Consensus 225 ~~~p~~h~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~ 304 (542)
T PRK06018 225 PVVPLFHANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGS 304 (542)
T ss_pred EecCHHHHhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCC
Confidence 4679999999887778899999998875 689999999999999999999999999998766555567789999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC----C--------CCCCccccccCCceEEEEeCCCCC----
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL----D--------VPSSSVGKVMPSMKMKVLVKSHTM---- 144 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~----~--------~~~~~~G~~~~~~~~~i~d~~~~~---- 144 (207)
+++++++++|++ ++.+ +++.||+||++.+++.... . ....++|+|.++++++++|+++++
T Consensus 305 ~l~~~~~~~~~~-~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~ 380 (542)
T PRK06018 305 AMPRSMIKAFED-MGVE---VRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWD 380 (542)
T ss_pred CCCHHHHHHHHH-hCCC---eEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCC
Confidence 999999999998 7866 9999999999877554321 0 123578999999999999998873
Q ss_pred -CCcceEEEEcCeeeecccccCCCc------CcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 145 -GSQDSFVISGDEIQFAPYCRKMSL------GAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 145 -g~~Gel~i~g~~~~~~gy~~~~~~------~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
++.|||+++|+.+ +.|||+.... -+.+||+.+++.++.+.++||.++.. +.+|.|++.
T Consensus 381 ~~~~Gel~i~g~~~-~~gy~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i--~~~G~~v~~ 445 (542)
T PRK06018 381 GKTFGRLKVRGPAV-AAAYYRVDGEILDDDGFFDTGDVATIDAYGYMRITDRSKDVI--KSGGEWISS 445 (542)
T ss_pred CCceeEEEEecCCc-chhhhcCcccEecCCcEEEcCCEEEEcCCccEEEEecCCCeE--EECCEEECH
Confidence 2579999999999 9999984321 24589999999999999999987766 468888864
No 99
>PRK12467 peptide synthase; Provisional
Probab=99.93 E-value=1.8e-25 Score=222.14 Aligned_cols=198 Identities=20% Similarity=0.229 Sum_probs=168.9
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCC---CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPH---FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
.+.|++|.++++.++.++..|+++++.++ .+|..+++.++++++|++.++|++++.|.+... ...+++++|.+++|
T Consensus 1764 ~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~v~~g 1842 (3956)
T PRK12467 1764 QFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRRVVCG 1842 (3956)
T ss_pred EecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceEEEEc
Confidence 56799999998889999999999999873 589999999999999999999999999987532 23457899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------CCCCCccccccCCceEEEEeCCCCC---CCcce
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------DVPSSSVGKVMPSMKMKVLVKSHTM---GSQDS 149 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~~---g~~Ge 149 (207)
|++++++++++|.+.++.. .++|.||+||++..++.... .....++|+|+++++++|+|+++++ |+.||
T Consensus 1843 Ge~l~~~~~~~~~~~~~~~--~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~GE 1920 (3956)
T PRK12467 1843 GEALEVEALRPWLERLPDT--GLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVAGE 1920 (3956)
T ss_pred cccCCHHHHHHHHHhCCCC--eEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCceE
Confidence 9999999999999988765 69999999999876654322 2235689999999999999998874 88999
Q ss_pred EEEEcCeeeecccccCCCcC----------------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 150 FVISGDEIQFAPYCRKMSLG----------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 150 l~i~g~~~~~~gy~~~~~~~----------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|+|+|+.+ +.||+++|+.+ ++|||..+...+|.+.++||.++.. .++|.+|++
T Consensus 1921 l~i~G~~v-~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qV--ki~G~rIel 1989 (3956)
T PRK12467 1921 LYLGGVGL-ARGYLNRPALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQV--KIRGFRIEL 1989 (3956)
T ss_pred EEeccccc-cccccCChhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceE--EeCeEEech
Confidence 99999999 99999988643 3489999999999999999988776 558888875
No 100
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.93 E-value=2.6e-25 Score=201.15 Aligned_cols=198 Identities=10% Similarity=0.099 Sum_probs=155.1
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++.+|++|++++.. ++..+..|+++++.+.++++.+++.|+++++|+++++|++++.|++.+.....+++++|.++ |
T Consensus 650 L~~~Pl~h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g 727 (994)
T PRK07868 650 YCLTPLHHESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--G 727 (994)
T ss_pred EEecChHHHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--c
Confidence 46789999999986 44556666667677789999999999999999999999999999887554445678899776 3
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCc-eEEEE-----------eCCC--C--
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSM-KMKVL-----------VKSH--T-- 143 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~-~~~i~-----------d~~~--~-- 143 (207)
+.+++++++++.+.++.. .+++.||+||++.... .....+.+++|+|+|++ +++|. |++| +
T Consensus 728 ~gl~~~l~~~~~~~~~~~--~l~~~YG~TE~~~~~~-~~~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~ 804 (994)
T PRK07868 728 SGMPTGLWERVVEAFAPA--HVVEFFATTDGQAVLA-NVSGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRA 804 (994)
T ss_pred CCCCHHHHHHHHHHhCch--heeeeeeccccccccc-ccCCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEc
Confidence 459999999999999854 5999999999875433 22234567999999998 66654 4445 2
Q ss_pred -CCCcceEEEEcCee------eecccccCCCcCcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 144 -MGSQDSFVISGDEI------QFAPYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 144 -~g~~Gel~i~g~~~------~~~gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+.|||+++++.. .+.+|+++.+.-+.|||.++++.+|.++++||.++.+ +.+|+||++
T Consensus 805 ~~ge~Gel~~~~~~~~~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~I--k~~G~~I~p 871 (994)
T PRK07868 805 EVNEVGVLLARARGPIDPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVI--RTARGPVYT 871 (994)
T ss_pred CCCCceEEEEecCCCCChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEE--EeCCceEcH
Confidence 48899999999753 0345564445556799999999999999999998888 557888874
No 101
>PRK05691 peptide synthase; Validated
Probab=99.93 E-value=2.2e-25 Score=222.85 Aligned_cols=197 Identities=22% Similarity=0.264 Sum_probs=169.6
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC---CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP---HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
...|++|..+++.++.++..|+++++.+ .+++..+++.++++++|++.++|++++.+.+... ..+++++|.+++|
T Consensus 1319 ~~~~~~fd~s~~~~~~~L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--~~~~~~lr~~~~g 1396 (4334)
T PRK05691 1319 QKAPISFDVSVWECFWPLITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPL--AAACTSLRRLFSG 1396 (4334)
T ss_pred EeCCccHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcc--cccCCcccEEEEe
Confidence 4678999999888999999999999986 4689999999999999999999999999987643 3457899999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---CCCCCccccccCCceEEEEeCCCC---CCCcceEEE
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVI 152 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i 152 (207)
|+++++++.++|.+.++.. +++|.||+||++..++.... .....++|+|+++++++|+|++++ +|+.|||+|
T Consensus 1397 Ge~l~~~~~~~~~~~~~~~--~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~vp~G~~GEL~i 1474 (4334)
T PRK05691 1397 GEALPAELRNRVLQRLPQV--QLHNRYGPTETAINVTHWQCQAEDGERSPIGRPLGNVLCRVLDAELNLLPPGVAGELCI 1474 (4334)
T ss_pred ecCCCHHHHHHHHHhCCCc--EEEeCCCcChheeeeeeeecccccCCCCcccceeCCCEEEEECCCCCCCCCCCceEEEe
Confidence 9999999999999998765 69999999999876654322 345568999999999999999887 389999999
Q ss_pred EcCeeeecccccCCCcCc----------------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 153 SGDEIQFAPYCRKMSLGA----------------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 153 ~g~~~~~~gy~~~~~~~~----------------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+.+ +.||+++|+.+. +|||.++++.+|.+.++||.++.. .++|.+|++
T Consensus 1475 ~G~~v-~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qi--ki~G~rie~ 1540 (4334)
T PRK05691 1475 GGAGL-ARGYLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQV--KLRGFRVEP 1540 (4334)
T ss_pred cCccc-chhhcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEE--EECCEEcCH
Confidence 99999 999999986542 488999999999999999988777 458888875
No 102
>PRK13388 acyl-CoA synthetase; Provisional
Probab=99.93 E-value=1.3e-24 Score=185.68 Aligned_cols=195 Identities=15% Similarity=0.268 Sum_probs=156.3
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+.+|++|.+++.. ++.++..|+++++.+.+++..+++.+++++++++..+|+++..+...+........++|. .+ |+
T Consensus 196 ~~~p~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~-~~-G~ 273 (540)
T PRK13388 196 VSMPLFHSNAVMAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRV-AF-GN 273 (540)
T ss_pred EeeCchhhcchHHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEE-EE-CC
Confidence 5689999999875 556799999999988899999999999999999999999999998765433333346664 33 66
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEE-----------EEeCCCC----CC
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMK-----------VLVKSHT----MG 145 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~-----------i~d~~~~----~g 145 (207)
+++++..+++.+.++.. +++.||+||++.++...+ ....+++|+|++++++. ++|++|+ ++
T Consensus 274 ~~~~~~~~~~~~~~~~~---l~~~YG~tE~~~~~~~~~-~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~ 349 (540)
T PRK13388 274 EASPRDIAEFSRRFGCQ---VEDGYGSSEGAVIVVREP-GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADE 349 (540)
T ss_pred CCCHHHHHHHHHHhCCc---eecccccccccceeecCC-CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCC
Confidence 78899999999998865 999999999987765432 34567899999997652 4455554 25
Q ss_pred CcceEEEE-cCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 146 SQDSFVIS-GDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 146 ~~Gel~i~-g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+.|||+++ |+.+ +.|||++|+.+ +.|||.++++.++.+++.||.++.. +.+|.||+.
T Consensus 350 ~~GEl~v~~g~~~-~~gY~~~~~~t~~~~~~g~~~TGD~~~~~~dg~l~i~GR~~d~i--~~~G~~v~p 415 (540)
T PRK13388 350 AIGELVNTAGAGF-FEGYYNNPEATAERMRHGMYWSGDLAYRDADGWIYFAGRTADWM--RVDGENLSA 415 (540)
T ss_pred cceEEEEecCCcc-cccccCChHHHHHHhhcCceeccceEEEcCCCcEEEeccCCceE--EECCEEeCH
Confidence 68999998 9999 99999998654 3589999999999999999988776 458888875
No 103
>PLN03102 acyl-activating enzyme; Provisional
Probab=99.92 E-value=2.2e-24 Score=185.74 Aligned_cols=195 Identities=21% Similarity=0.224 Sum_probs=152.7
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~ 81 (207)
+.+|++|.+++...+.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+.........++++.+++||++
T Consensus 232 ~~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~ 311 (579)
T PLN03102 232 WTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSP 311 (579)
T ss_pred ecCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCC
Confidence 46899999998877888999999999998999999999999999999999999999988654334445678889999999
Q ss_pred CCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC---------------CCCCCccccccCCceEEEEeCCC-C--
Q psy9665 82 VGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL---------------DVPSSSVGKVMPSMKMKVLVKSH-T-- 143 (207)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~---------------~~~~~~~G~~~~~~~~~i~d~~~-~-- 143 (207)
+++++.+++.+ ++.. +++.||+||+++.++.... ....+..+.+.+ .+++.|++. +
T Consensus 312 ~~~~~~~~~~~-~g~~---i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v 385 (579)
T PLN03102 312 PPAALVKKVQR-LGFQ---VMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESV 385 (579)
T ss_pred CCHHHHHHHHH-cCCe---EEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEecccccccc
Confidence 99999999875 5755 9999999999865433210 011223333333 455666432 2
Q ss_pred C---CCcceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 144 M---GSQDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 144 ~---g~~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+ ++.|||+|+|+.+ +.|||++|+.+ ++|||..+++.+|.+++.||.++... .+|+||+.
T Consensus 386 ~~~~~~~GEl~v~g~~~-~~GY~~~~~~t~~~f~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~--~~G~~v~p 455 (579)
T PLN03102 386 PRDGKTMGEIVIKGSSI-MKGYLKNPKATSEAFKHGWLNTGDVGVIHPDGHVEIKDRSKDIII--SGGENISS 455 (579)
T ss_pred CCCCCCceEEEEECcch-hhhhcCChhhhHhhhccCceecCceEEEcCCCeEEEEeccCcEEE--ECCEEECH
Confidence 1 3579999999999 99999998654 35899999999999999999887774 58888764
No 104
>PRK05691 peptide synthase; Validated
Probab=99.92 E-value=5e-24 Score=213.32 Aligned_cols=196 Identities=14% Similarity=0.158 Sum_probs=167.8
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC---CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP---HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~---~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
...|++|..+++.++.+++.|+++++.+ ..++..+++.++++++|++..+|++++.++... ...+++||.+++|
T Consensus 3915 ~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~lr~~~~g 3991 (4334)
T PRK05691 3915 QTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---RQALDGLRWMLPT 3991 (4334)
T ss_pred EecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---cccCCCceEEEec
Confidence 4578889999888999999999999987 358999999999999999999999999987643 2346789999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-----CCCCCccccccCCceEEEEeCCCC---CCCcceE
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-----DVPSSSVGKVMPSMKMKVLVKSHT---MGSQDSF 150 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-----~~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel 150 (207)
|+++++++.++|.+.++.. +++|.||+||++..++.... .....++|+|++++++.|+|++++ .|..|||
T Consensus 3992 Ge~l~~~~~~~~~~~~~~~--~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~~p~g~~GEL 4069 (4334)
T PRK05691 3992 GEAMPPELARQWLQRYPQI--GLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALELVPLGAVGEL 4069 (4334)
T ss_pred CCcCCHHHHHHHHHhCCCC--eEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCCCCCCCCceEE
Confidence 9999999999999887766 79999999999877654432 123346999999999999998886 3899999
Q ss_pred EEEcCeeeecccccCCCcCc----------------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 151 VISGDEIQFAPYCRKMSLGA----------------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 151 ~i~g~~~~~~gy~~~~~~~~----------------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|+|+.+ ++||+++|+.|. +|||..++..+|.+.++||.++.. .++|.+|++
T Consensus 4070 ~i~G~~v-~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qv--ki~G~riel 4137 (4334)
T PRK05691 4070 CVAGTGV-GRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQV--KIRGYRIEL 4137 (4334)
T ss_pred EEecccc-cccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcE--EeceEEecH
Confidence 9999999 999999986643 489999999999999999987766 668988875
No 105
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=99.92 E-value=9.7e-24 Score=175.46 Aligned_cols=189 Identities=22% Similarity=0.312 Sum_probs=155.0
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~ 81 (207)
+.+|++|++++..++.++..|+++++.+.++ .+++.+++++++++.++|+++..+.+..... +++|.++++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~----~~l~~~~~~G~~ 230 (436)
T TIGR01923 157 LSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVTHISLVPTQLNRLLDEGGHN----ENLRKILLGGSA 230 (436)
T ss_pred EccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC----CceEEEEECCCC
Confidence 5689999999888889999999999997664 8899999999999999999999998875321 689999999999
Q ss_pred CCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC--CCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCeeee
Q psy9665 82 VGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL--DVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEIQF 159 (207)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~--~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~~~ 159 (207)
+++++.+++++ ++.. +++.||+||++..++.... .....++|+|++++++++.+++. ++.|||+++++.+ +
T Consensus 231 ~~~~~~~~~~~-~~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~--~~~Gel~v~~~~~-~ 303 (436)
T TIGR01923 231 IPAPLIEEAQQ-YGLP---IYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKVDNK--EGHGEIMVKGANL-M 303 (436)
T ss_pred CCHHHHHHHHH-hCCc---eeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEeCCC--CCceEEEEECCcc-c
Confidence 99999998875 4765 9999999999876554433 22223489999999999944332 3789999999999 9
Q ss_pred cccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 160 APYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 160 ~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.|||++++.+ +.+||..+.++++.+++.||-++..+ .+|.++++
T Consensus 304 ~gy~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~~d~i~--~~G~~v~~ 355 (436)
T TIGR01923 304 KGYLYQGELTPAFEQQGWFNTGDIGELDGEGFLYVLGRRDDLII--SGGENIYP 355 (436)
T ss_pred hhhCCChhhhhhhhcCCCeeccceEEEcCCCCEEEeccccCeEE--eCCEeeCH
Confidence 9999977443 23899999999999999999887774 56777764
No 106
>PRK07867 acyl-CoA synthetase; Validated
Probab=99.92 E-value=1.6e-23 Score=178.62 Aligned_cols=193 Identities=16% Similarity=0.247 Sum_probs=154.0
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
+++|++|.+++.. ++.++..|+++++.++++++.+++.++++++|++.++|+.+..++..........+++|. ++||+
T Consensus 198 ~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~ 276 (529)
T PRK07867 198 VSMPLFHSNAVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNE 276 (529)
T ss_pred EecchhHHHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCC
Confidence 5689999999875 667899999999999999999999999999999999999999988765433333457884 56888
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeC-CCC---CCC----------
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVK-SHT---MGS---------- 146 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~-~~~---~g~---------- 146 (207)
++++. .+++.+.++.. +++.||+||++..+...+ ....+++|.|+++ ++++|+ ++. +++
T Consensus 277 ~~~~~-~~~~~~~~g~~---l~~~YG~TE~~~~~~~~~-~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~ 349 (529)
T PRK07867 277 GAPGD-IARFARRFGCV---VVDGFGSTEGGVAITRTP-DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNAD 349 (529)
T ss_pred CChHH-HHHHHHHhCCc---EEEeecccccccccccCC-CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccC
Confidence 88766 46778888865 999999999986554322 3445789999998 677774 343 255
Q ss_pred --cceEEE-EcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 147 --QDSFVI-SGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 147 --~Gel~i-~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
.|||++ +|+.+ +.|||++++.+ +.|||..++++++.+.+.||.++.. +++|.||+.
T Consensus 350 ~~~Gel~i~~g~~~-~~gy~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~~~GR~~d~i--~~~G~~v~p 416 (529)
T PRK07867 350 EAIGELVNTAGPGG-FEGYYNDPEADAERMRGGVYWSGDLAYRDADGYAYFAGRLGDWM--RVDGENLGT 416 (529)
T ss_pred CcceEEEEecCCcc-cccccCChHhhhhhhcCCeEeeccEEEEeCCCcEEEeccccCeE--EECCEEeCH
Confidence 899999 99999 99999998654 2488888998899999999988776 458888764
No 107
>PLN02479 acetate-CoA ligase
Probab=99.91 E-value=1.4e-23 Score=180.43 Aligned_cols=196 Identities=17% Similarity=0.213 Sum_probs=151.9
Q ss_pred cccccchHHHHHHHHHH-HHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCC-CCCCceeEEEEcc
Q psy9665 2 ALVPFFHGYGLLLMLQA-ICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQ-YDLSSLTNIRCGA 79 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~-l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-~~l~~lr~~~~~G 79 (207)
+.+|++|++++...+.. ++.|. .++++.++++.+++.++++++|++..+|++++.|.+...... .+++++|.++++|
T Consensus 241 ~~~p~~h~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G 319 (567)
T PLN02479 241 WTLPMFHCNGWCFTWTLAALCGT-NICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAG 319 (567)
T ss_pred EecchhhhhhHHHHHHHHhhcCc-eEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcC
Confidence 56899999998754444 55454 455668999999999999999999999999999987654322 3578999999999
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccC---------C---CCCCCccccccCCce-EEEEeC-CCCC-
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSD---------L---DVPSSSVGKVMPSMK-MKVLVK-SHTM- 144 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~---------~---~~~~~~~G~~~~~~~-~~i~d~-~~~~- 144 (207)
+++++++++++.+. +.+ +++.||+||+++.++... . .....+.|.+.+++. ++++|+ ++.+
T Consensus 320 ~~~~~~~~~~~~~~-~~~---~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~ 395 (567)
T PLN02479 320 AAPPPSVLFAMSEK-GFR---VTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPV 395 (567)
T ss_pred CCCCHHHHHHHHhc-CCc---eecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCccc
Confidence 99999999999865 654 999999999864432211 0 111235678888875 889884 3432
Q ss_pred ---C-CcceEEEEcCeeeecccccCCCcCc--------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 145 ---G-SQDSFVISGDEIQFAPYCRKMSLGA--------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 145 ---g-~~Gel~i~g~~~~~~gy~~~~~~~~--------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+ +.|||+++|+.+ +.|||++++.+. ++||+.+++.++.++++||.++.. +.+|.||+.
T Consensus 396 ~~~g~~~GEl~v~g~~~-~~GY~~~~~~t~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i--~~~G~~v~~ 465 (567)
T PLN02479 396 PADGKTMGEIVMRGNMV-MKGYLKNPKANEEAFANGWFHSGDLGVKHPDGYIEIKDRSKDII--ISGGENISS 465 (567)
T ss_pred CCCCCCceEEEEeccch-hhhhhcCcccccchhcCCceecceeEEEcCCccEEEeccccceE--EeCCEEEcH
Confidence 2 579999999999 999999997653 488988998899999999988777 468888874
No 108
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=99.91 E-value=2.5e-23 Score=177.90 Aligned_cols=201 Identities=22% Similarity=0.311 Sum_probs=159.6
Q ss_pred cccccchHHHHHH-HHHHHHhCCeEEEeCC----CCHHHHHHHHHhcCceEeeccHHHHHHHHhCC----CCCCCCCCce
Q psy9665 2 ALVPFFHGYGLLL-MLQAICMNNKLVVLPH----FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSP----LVDQYDLSSL 72 (207)
Q Consensus 2 ~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~~~~~l~~l 72 (207)
+++|++|.+++.. +..++..|+++++.++ .+|..+++.+++++++++..+|.++..+.+.. .....+++++
T Consensus 199 ~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l 278 (545)
T PRK07768 199 SWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSL 278 (545)
T ss_pred EeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchhe
Confidence 5789999999884 6678999999998863 27888999999999999887777776655421 1124677899
Q ss_pred eEEEEccCCCCHHHHHHHHHH---hCCCcCcceeccccccccceeeccCC---------------------------CCC
Q psy9665 73 TNIRCGAAPVGKSTLDQVGER---LGLSMDSMKQGYGMTELTILVTFSDL---------------------------DVP 122 (207)
Q Consensus 73 r~~~~~G~~~~~~~~~~~~~~---~~~~~~~i~~~YG~tE~g~~~~~~~~---------------------------~~~ 122 (207)
|.++++|+++++++.+++.+. ++.+...+++.||+||++..++.... ...
T Consensus 279 r~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (545)
T PRK07768 279 RFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRR 358 (545)
T ss_pred eeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcce
Confidence 999999999999999999874 55432259999999999876543221 113
Q ss_pred CCccccccCCceEEEEeCCCC---CCCcceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCc
Q psy9665 123 SSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGS 191 (207)
Q Consensus 123 ~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~ 191 (207)
.+++|+|+++++++++|++++ +++.|||+++|+.+ +.|||+.+... +.|||..+++.++.+.++||.+
T Consensus 359 ~~~~G~~~~g~~~~i~~~~~~~~~~g~~Gel~v~~~~~-~~gy~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~~~GR~~ 437 (545)
T PRK07768 359 LATLGPPLPGLEVRVVDEDGQVLPPRGVGVIELRGESV-TPGYLTMDGFIPAQDADGWLDTGDLGYLTEEGEVVVCGRVK 437 (545)
T ss_pred EEeccCCCCCCEEEEECCCCCCCCCCCEEEEEEccCcc-cccccCCCCCcccccCCCeeeccceEEEecCCEEEEEcccc
Confidence 457999999999999998887 48899999999999 99999865322 3588888888889999999988
Q ss_pred cccccccCCCcccc
Q psy9665 192 QSCEENLGADNISL 205 (207)
Q Consensus 192 ~~~~~~~~~~~~s~ 205 (207)
++. +.+|.|+++
T Consensus 438 d~i--~~~G~~v~~ 449 (545)
T PRK07768 438 DVI--IMAGRNIYP 449 (545)
T ss_pred ceE--EECCEecCH
Confidence 877 558888874
No 109
>KOG1175|consensus
Probab=99.91 E-value=1.4e-23 Score=176.97 Aligned_cols=198 Identities=17% Similarity=0.190 Sum_probs=167.6
Q ss_pred ccccchHHHHHH-HHHHHHhCCeEEEeC--CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCC--CCCCCceeEEEE
Q psy9665 3 LVPFFHGYGLLL-MLQAICMNNKLVVLP--HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVD--QYDLSSLTNIRC 77 (207)
Q Consensus 3 ~~Pl~h~~g~~~-~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~~~~ 77 (207)
+.-+.|+.|.+. ++.+|++|+|+++.+ ++++..+|+++.++++|+++..|+.++.|.+..... .+++++||.+.+
T Consensus 287 ~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S 366 (626)
T KOG1175|consen 287 ASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGS 366 (626)
T ss_pred ecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEee
Confidence 344567777774 778999999999987 579999999999999999999999999887765543 344467999999
Q ss_pred ccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC-C--CCCCccccccCCceEEEEeCCCCC--C--CcceE
Q psy9665 78 GAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-D--VPSSSVGKVMPSMKMKVLVKSHTM--G--SQDSF 150 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~--~~~~~~G~~~~~~~~~i~d~~~~~--g--~~Gel 150 (207)
+|+|++++.+.++.+.++.. .+++.||+||+|..++.... . ..+++.+.|++++.+.|.|++|++ + +.|+|
T Consensus 367 ~Gepi~~~~~ew~~~~~~~~--pv~e~~~qtEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~~~G~l 444 (626)
T KOG1175|consen 367 VGEPINPEAWEWWKRVTGLD--PIYETYGQTETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPSTGNGEL 444 (626)
T ss_pred cCccCCcchHHHHHHhcCcc--chhhceeeeccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCCceeEE
Confidence 99999999999999999974 59999999999999988776 5 789999999999999999998883 3 88999
Q ss_pred EEEcCee--eecccccCCCc---C--------cccCCcEEEcCeeEEEEEecCccccccccCCCccc
Q psy9665 151 VISGDEI--QFAPYCRKMSL---G--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 151 ~i~g~~~--~~~gy~~~~~~---~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
+++.+.. .+++||++++. + +++||..+.+.+|.+++.||-+++. |+.|-.+|
T Consensus 445 ~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDvi--NvsGhRig 509 (626)
T KOG1175|consen 445 RLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVI--NVSGHRIG 509 (626)
T ss_pred EEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccc--cccceeec
Confidence 9987543 27899999971 1 1399999999999999988766665 88888776
No 110
>PRK09192 acyl-CoA synthetase; Validated
Probab=99.91 E-value=1.8e-23 Score=180.06 Aligned_cols=201 Identities=20% Similarity=0.261 Sum_probs=155.8
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeC--C--CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC---CCCCCCCce
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLP--H--FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL---VDQYDLSSL 72 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~--~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~~~~~l~~l 72 (207)
++++|++|.+|+. .++.++..|+++++.+ . .+|..+++.++++++++++..|.++..+..... ....+++++
T Consensus 222 l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~l 301 (579)
T PRK09192 222 VSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCW 301 (579)
T ss_pred EEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhh
Confidence 3578999999988 4777889999998876 2 278999999999999987765555554443221 233567899
Q ss_pred eEEEEccCCCCHHHHHHHHHHhCC---CcCcceeccccccccceeeccCC-C----------------------------
Q psy9665 73 TNIRCGAAPVGKSTLDQVGERLGL---SMDSMKQGYGMTELTILVTFSDL-D---------------------------- 120 (207)
Q Consensus 73 r~~~~~G~~~~~~~~~~~~~~~~~---~~~~i~~~YG~tE~g~~~~~~~~-~---------------------------- 120 (207)
|.+++||+++++++++++.+.++. ....+++.||+||++..+...+. .
T Consensus 302 r~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (579)
T PRK09192 302 RVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRV 381 (579)
T ss_pred heeEecCccCCHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccc
Confidence 999999999999999999998742 11148999999999766554322 0
Q ss_pred CCCCccccccCCceEEEEeCCCC---CCCcceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEec
Q psy9665 121 VPSSSVGKVMPSMKMKVLVKSHT---MGSQDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGF 189 (207)
Q Consensus 121 ~~~~~~G~~~~~~~~~i~d~~~~---~g~~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~gr 189 (207)
....++|+|+|+++++|+|+++. +++.|||+++|+.+ +.|||++++.. ..+||..++ .+|.++++||
T Consensus 382 ~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~Gel~i~g~~~-~~gY~~~~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR 459 (579)
T PRK09192 382 RTFVNCGKALPGHEIEIRNEAGMPLPERVVGHICVRGPSL-MSGYFRDEESQDVLAADGWLDTGDLGYL-LDGYLYITGR 459 (579)
T ss_pred eeEeecCCcCCCcEEEEECCCCCCCCCCCEEEEEecCCch-hhhhcCCccccccccCCceeeccceeeE-ECCEEEEEec
Confidence 01247899999999999998876 37889999999999 99999985322 247888888 7899999999
Q ss_pred CccccccccCCCcccc
Q psy9665 190 GSQSCEENLGADNISL 205 (207)
Q Consensus 190 g~~~~~~~~~~~~~s~ 205 (207)
.+++.+ ++|.||+.
T Consensus 460 ~dd~i~--~~G~~v~p 473 (579)
T PRK09192 460 AKDLII--INGRNIWP 473 (579)
T ss_pred cccEEE--ECCCccCH
Confidence 888884 58888864
No 111
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=99.91 E-value=4.2e-23 Score=178.42 Aligned_cols=195 Identities=14% Similarity=0.183 Sum_probs=151.7
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++.+|++|.+|+.. ++.++..|+++++.+.+++..+++.++++++|++.++|++++.+.+..........++|.+ .|
T Consensus 244 l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g 321 (600)
T PRK08279 244 YCCLPLYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IG 321 (600)
T ss_pred EEecCchhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ec
Confidence 35789999999985 5667888999999889999999999999999999999999999987654444445677764 47
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccC----CceE---------EEEeCCCC---
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMP----SMKM---------KVLVKSHT--- 143 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~----~~~~---------~i~d~~~~--- 143 (207)
++++++++++|.+.++.. .+++.||+||++...... ....+++|++.+ +..+ .+.+.++.
T Consensus 322 ~~l~~~~~~~~~~~~~~~--~l~~~YG~tE~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 397 (600)
T PRK08279 322 NGLRPDIWDEFQQRFGIP--RILEFYAASEGNVGFINV--FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIK 397 (600)
T ss_pred CCCCHHHHHHHHHHhCcc--eeeeeecccccceeeccc--CCCCcccccccccccccceeeeeccCcCceeeCCCCcccc
Confidence 789999999999999976 699999999998644322 234456777655 3332 23333332
Q ss_pred --CCCcceEE--EEcCeeeecccccCCCcC---------------cccCCcEEEcCeeEEEEEecCccccccccCCCccc
Q psy9665 144 --MGSQDSFV--ISGDEIQFAPYCRKMSLG---------------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 144 --~g~~Gel~--i~g~~~~~~gy~~~~~~~---------------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
+|+.|||+ |+++.+ +.|| ++++.+ +.|||.++++.+|.+++.||.+++. +++|.||+
T Consensus 398 ~~~g~~Gel~~~i~~~~~-~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~i--k~~G~~i~ 473 (600)
T PRK08279 398 VKPGEVGLLIGRITDRGP-FDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTF--RWKGENVA 473 (600)
T ss_pred CCCCCceeEEEEecCccc-cccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeE--EECCcccC
Confidence 47889998 678888 9999 666432 3589999999999999999988777 55888887
Q ss_pred c
Q psy9665 205 L 205 (207)
Q Consensus 205 ~ 205 (207)
+
T Consensus 474 p 474 (600)
T PRK08279 474 T 474 (600)
T ss_pred H
Confidence 5
No 112
>PRK05850 acyl-CoA synthetase; Validated
Probab=99.90 E-value=3e-23 Score=178.55 Aligned_cols=198 Identities=17% Similarity=0.249 Sum_probs=147.3
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeCCC----CHHHHHHHHHhcCceEeeccHHHHH-HHHhCC---CCCCCCCCce
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLPHF----DGHLFLSSIEKYRVTLLPAVPPLVV-FLAKSP---LVDQYDLSSL 72 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~-~l~~~~---~~~~~~l~~l 72 (207)
+++|++|.+|++ .++.+++.|+++++.+++ +|..+++.+++++++.. .+|+++. .+.... .....+++++
T Consensus 212 ~~~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~l 290 (578)
T PRK05850 212 SWLPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGV 290 (578)
T ss_pred EECCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhh
Confidence 578999999987 488899999999998742 79999999999999865 5565543 333321 1123467899
Q ss_pred eEEEEccCCCCHHHHHHHHHHhCC---CcCcceeccccccccceeeccCC-CC-------------------------CC
Q psy9665 73 TNIRCGAAPVGKSTLDQVGERLGL---SMDSMKQGYGMTELTILVTFSDL-DV-------------------------PS 123 (207)
Q Consensus 73 r~~~~~G~~~~~~~~~~~~~~~~~---~~~~i~~~YG~tE~g~~~~~~~~-~~-------------------------~~ 123 (207)
|.+++||++++++++++|.+.|+. +...+++.||+||++..+..... .. ..
T Consensus 291 r~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 370 (578)
T PRK05850 291 LGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPL 370 (578)
T ss_pred eeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceE
Confidence 999999999999999999998742 11148999999998755443211 00 00
Q ss_pred CccccccCCceEEEEeCCC-C---CCCcceEEEEcCeeeecccccCCCcCc--------------------ccCCcEEEc
Q psy9665 124 SSVGKVMPSMKMKVLVKSH-T---MGSQDSFVISGDEIQFAPYCRKMSLGA--------------------YLCHWLKLK 179 (207)
Q Consensus 124 ~~~G~~~~~~~~~i~d~~~-~---~g~~Gel~i~g~~~~~~gy~~~~~~~~--------------------~~~d~~~~~ 179 (207)
...|.|. +.+++++|+++ . +|+.|||+|+|+.+ +.|||++|+.++ .|||..+++
T Consensus 371 ~~~g~p~-~~~~~ivd~~~~~~~~~g~~Gel~v~g~~~-~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~ 448 (578)
T PRK05850 371 VSYGSPR-SPTVRIVDPDTCIECPAGTVGEIWVHGDNV-AAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS 448 (578)
T ss_pred EeccCCC-CCEEEEEcCCCCcCCCCCCEEEEEEecCcc-cccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE
Confidence 1234443 57899999653 3 48999999999999 999999885432 377777776
Q ss_pred CeeEEEEEecCccccccccCCCcccc
Q psy9665 180 GKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 180 ~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+|.+++.||.++.. +++|.||++
T Consensus 449 -~G~l~~~GR~~d~i--~~~G~~i~p 471 (578)
T PRK05850 449 -EGELFIVGRIKDLL--IVDGRNHYP 471 (578)
T ss_pred -CCEEEEEcccccEE--EECCeecCH
Confidence 79999999988777 458999875
No 113
>PRK07798 acyl-CoA synthetase; Validated
Probab=99.90 E-value=1.5e-22 Score=172.19 Aligned_cols=197 Identities=22% Similarity=0.246 Sum_probs=155.4
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHHhcCceEeeccHHHHHH-HHhCCC-CCCCCCCceeEEEE
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIEKYRVTLLPAVPPLVVF-LAKSPL-VDQYDLSSLTNIRC 77 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~~~~t~~~~~P~~~~~-l~~~~~-~~~~~l~~lr~~~~ 77 (207)
..+|++|.++++.++.+++.|+++++.+ .+++..+++.++++++|++.++|+.+.. +.+... ....+++++|.+++
T Consensus 224 ~~~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~ 303 (533)
T PRK07798 224 PAPPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIAS 303 (533)
T ss_pred EecchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEE
Confidence 4579999999988899999999999999 7899999999999999999999866533 333322 23456789999999
Q ss_pred ccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccc--cccCCceEEEEeCCCCC---CCc--ceE
Q psy9665 78 GAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVG--KVMPSMKMKVLVKSHTM---GSQ--DSF 150 (207)
Q Consensus 78 ~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G--~~~~~~~~~i~d~~~~~---g~~--Gel 150 (207)
||+++++++.+++.+.++.. .+++.||+||++.+...... ......| .+.++..++++|+++.+ |+. |++
T Consensus 304 gG~~~~~~~~~~~~~~~~~~--~~~~~YG~tE~~~~~~~~~~-~~~~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l 380 (533)
T PRK07798 304 GGALFSPSVKEALLELLPNV--VLTDSIGSSETGFGGSGTVA-KGAVHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWI 380 (533)
T ss_pred CCCCCCHHHHHHHHHHcCCC--eEEeeecccccccccccCCC-CCCccCCCCccCCCceEEEECCCCCCCCCCCCCeeEE
Confidence 99999999999999988544 59999999999765544322 1112333 77899999999998874 555 655
Q ss_pred EEEcCeeeecccccCCCcCc------------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 151 VISGDEIQFAPYCRKMSLGA------------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 151 ~i~g~~~~~~gy~~~~~~~~------------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+ +++.+ +.|||++++.+. .|||+.+++.++.+++.||.+++. +.+|+||++
T Consensus 381 ~-~~~~~-~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i--~~~G~~v~~ 443 (533)
T PRK07798 381 A-RRGHI-PLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCI--NTGGEKVFP 443 (533)
T ss_pred E-eecCc-cccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceE--ecCCEEeCH
Confidence 5 56677 899999875432 379999999999999999988877 467888764
No 114
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.90 E-value=1.7e-22 Score=169.27 Aligned_cols=178 Identities=20% Similarity=0.223 Sum_probs=146.4
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCC
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~ 81 (207)
..+|++|.+|+..++.++..|+++++.+. ..+++.++ +++.+..+|+++..+...... ..++|.+++||++
T Consensus 181 ~~~p~~h~~g~~~~~~~l~~G~~v~~~~~---~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~ 251 (458)
T PRK09029 181 LSLPLFHVSGQGIVWRWLYAGATLVVRDK---QPLEQALA--GCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAA 251 (458)
T ss_pred EecCcHhhhhhHHHHHHHhCCceEEeCCh---HHHHHHHh--hceeeecChHHHHHHHhcccc----CCcceEEEECCCC
Confidence 56899999998777888999999998874 45677774 789999999999999876542 3479999999999
Q ss_pred CCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCeeeecc
Q psy9665 82 VGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEIQFAP 161 (207)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~~~~g 161 (207)
+++++.+++.+. +.. +++.||+||++........ +...++|+|++++++++++ |||+|+|+.+ +.|
T Consensus 252 ~~~~~~~~~~~~-g~~---~~~~YG~tE~~~~~~~~~~-~~~~~~G~~~~~~~~~i~~--------gel~v~g~~~-~~g 317 (458)
T PRK09029 252 IPVELTEQAEQQ-GIR---CWCGYGLTEMASTVCAKRA-DGLAGVGSPLPGREVKLVD--------GEIWLRGASL-ALG 317 (458)
T ss_pred CCHHHHHHHHHc-CCc---EeccccccccCcceeccCC-CCCCCCCCCCCCCEEEEeC--------CEEEEecCce-eee
Confidence 999999998754 755 9999999999866544332 2345699999999999975 8999999999 999
Q ss_pred cccCCCcCc--------ccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 162 YCRKMSLGA--------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 162 y~~~~~~~~--------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
||++++.+. .|||..+++ ++.++++||.++.. +.+|.||++
T Consensus 318 Y~~~~~~~~~~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i--~~~G~~v~p 366 (458)
T PRK09029 318 YWRQGQLVPLVNDEGWFATRDRGEWQ-NGELTILGRLDNLF--FSGGEGIQP 366 (458)
T ss_pred eecCccccccccCCCccCCCCcEEEe-CCEEEEecccccce--eeCCEEeCH
Confidence 999885542 489999998 89999999987776 568888774
No 115
>PRK08162 acyl-CoA synthetase; Validated
Probab=99.89 E-value=3.9e-22 Score=170.46 Aligned_cols=198 Identities=17% Similarity=0.178 Sum_probs=153.0
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
++.+|++|.+++...+...+.|++.++.+++++..+++.++++++|++.++|++++.|.+........+.+.+.++++|+
T Consensus 227 l~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~ 306 (545)
T PRK08162 227 LWTLPMFHCNGWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGA 306 (545)
T ss_pred EeccCcHhhhhHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCC
Confidence 35789999999876555556777777778899999999999999999999999999998875543344556777889999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCC------------CCCCCccccccCC-ceEEEEeCC-CCC--
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL------------DVPSSSVGKVMPS-MKMKVLVKS-HTM-- 144 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~------------~~~~~~~G~~~~~-~~~~i~d~~-~~~-- 144 (207)
++++++.+++++. +.+ +++.||+||+++.+..... .....++|.+++. ..++++|++ +.+
T Consensus 307 ~~~~~~~~~~~~~-~~~---~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 382 (545)
T PRK08162 307 APPAAVIAKMEEI-GFD---LTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVP 382 (545)
T ss_pred CCCHHHHHHHHHh-CCc---eeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccC
Confidence 9999999998764 655 9999999998654433211 0123456766653 357888854 442
Q ss_pred --C-CcceEEEEcCeeeecccccCCCcC--------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 145 --G-SQDSFVISGDEIQFAPYCRKMSLG--------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 145 --g-~~Gel~i~g~~~~~~gy~~~~~~~--------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
| +.|||+|+|+.+ +.||+++++.+ +.+||..++++++.++++||.++..+ .+|.|++.
T Consensus 383 ~~g~~~Gel~v~g~~~-~~gY~~~~~~~~~~~~~g~~~TGDl~~~d~dg~l~~~GR~~~~i~--~~G~~v~~ 451 (545)
T PRK08162 383 ADGETIGEIMFRGNIV-MKGYLKNPKATEEAFAGGWFHTGDLAVLHPDGYIKIKDRSKDIII--SGGENISS 451 (545)
T ss_pred CCCCceeEEEEecCcc-hhhhcCChhhhHHHhhCCCcccCceEEEcCCccEEEEecccceEE--eCCEEECH
Confidence 3 369999999999 99999998654 34899999999999999999877774 57777764
No 116
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.89 E-value=8.6e-22 Score=160.24 Aligned_cols=178 Identities=17% Similarity=0.237 Sum_probs=145.7
Q ss_pred cccccchHHHHHHHHHHHHhCCeEEEe---CCCCHHHHHHHHHhcC--ceEeeccHHHHHHHHhCCCCCCCCCCceeEEE
Q psy9665 2 ALVPFFHGYGLLLMLQAICMNNKLVVL---PHFDGHLFLSSIEKYR--VTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIR 76 (207)
Q Consensus 2 ~~~Pl~h~~g~~~~~~~l~~G~~~v~~---~~~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~ 76 (207)
..+|++|.+|+..++.+++.|+++++. ..+++..+++.+++++ .++...+|.++..++..+.. ..+++++|.++
T Consensus 79 ~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~-~~~~~~l~~i~ 157 (358)
T PRK07824 79 LALPAHHIAGLQVLVRSVIAGSEPVELDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAA-TAALAELDAVL 157 (358)
T ss_pred EECChHHHHHHHHHHHHHHcCCeEEecCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccc-cCCcccceEEE
Confidence 568999999988888899999999883 3689999999999998 56667789888877765442 34678999999
Q ss_pred EccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCe
Q psy9665 77 CGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDE 156 (207)
Q Consensus 77 ~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~ 156 (207)
+||+++++++++++.+ ++.. +++.||+||++..+ ...|+|++++++++.| |||+++|+.
T Consensus 158 ~gG~~l~~~~~~~~~~-~~~~---v~~~YG~TE~~~~~---------~~~G~~~~g~~v~i~~--------Gei~v~g~~ 216 (358)
T PRK07824 158 VGGGPAPAPVLDAAAA-AGIN---VVRTYGMSETSGGC---------VYDGVPLDGVRVRVED--------GRIALGGPT 216 (358)
T ss_pred ECCCCCCHHHHHHHHh-cCCc---EEecccCCccCCCc---------CcCceeCCCCEEEecC--------CEEEEecCc
Confidence 9999999999999885 4654 99999999987543 2358899999999932 999999999
Q ss_pred eeecccccCCCcC-------cccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 157 IQFAPYCRKMSLG-------AYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 157 ~~~~gy~~~~~~~-------~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+ +.||+++++.. +.|||..++ .++.+.+.||-++..+ .+|+||+.
T Consensus 217 ~-~~gY~~~~~~~~~~~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~--~~G~~v~p 268 (358)
T PRK07824 217 L-AKGYRNPVDPDPFAEPGWFRTDDLGAL-DDGVLTVLGRADDAIS--TGGLTVLP 268 (358)
T ss_pred c-ccccCCCcccccccCCCceecccEEEE-eCCEEEEEeccCCeEE--ECCEEECH
Confidence 9 99999988543 248888888 6789999999888875 58888864
No 117
>PRK08308 acyl-CoA synthetase; Validated
Probab=99.89 E-value=1.3e-21 Score=162.14 Aligned_cols=179 Identities=17% Similarity=0.211 Sum_probs=145.7
Q ss_pred cccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC
Q psy9665 2 ALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 2 ~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~ 80 (207)
..+|++|.+|+. .++.++..|+++++.+.+++..+++.++++++++++++|+++..+.+.... ..+++.++.+|+
T Consensus 147 ~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~ 222 (414)
T PRK08308 147 VACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGT 222 (414)
T ss_pred EecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccC
Confidence 468999999987 488899999999999999999999999999999999999999999876432 136888999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCeeeec
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEIQFA 160 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~~~~ 160 (207)
++++++++++++. .. ++++.||+||++.+.... ......++|+|+|++++++.+++ ++.|||++++..
T Consensus 223 ~l~~~~~~~~~~~-~~---~~~~~YG~tE~~~~~~~~-~~~~~~~~G~p~~~~~~~~~~~~---~~~gel~v~~~~---- 290 (414)
T PRK08308 223 PLPEAWFYKLRER-TT---YMMQQYGCSEAGCVSICP-DMKSHLDLGNPLPHVSVSAGSDE---NAPEEIVVKMGD---- 290 (414)
T ss_pred CCCHHHHHHHHHh-CC---hhhhccCccccCCeeecC-CCCCCCccCccCCCeEEEEecCC---CCCceEEEEcCC----
Confidence 9999999999987 43 499999999998654432 23455789999999999997643 567999997542
Q ss_pred ccccCCCcCcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 161 PYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 161 gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+| +.|||..+.++++.++++||-++.. +++|.||++
T Consensus 291 ~~-------~~TGDl~~~~~dg~l~~~GR~~~~i--k~~G~~v~p 326 (414)
T PRK08308 291 KE-------IFTKDLGYKSERGTLHFMGRMDDVI--NVSGLNVYP 326 (414)
T ss_pred ce-------EECCceEEECCCccEEEecccCCeE--EECCEEECH
Confidence 22 3578888888888888888877777 456777764
No 118
>KOG1180|consensus
Probab=99.88 E-value=5.1e-23 Score=168.20 Aligned_cols=199 Identities=18% Similarity=0.213 Sum_probs=155.3
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCC---C-HHHH----HHHHHhcCceEeeccHHHHHHHHhC-----------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHF---D-GHLF----LSSIEKYRVTLLPAVPPLVVFLAKS----------- 61 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~---~-~~~~----~~~i~~~~~t~~~~~P~~~~~l~~~----------- 61 (207)
+.++||.|++.+..=+.++..|+++-..++. | ...+ --.+...++|.+.++|++++++.+.
T Consensus 283 i~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~ 362 (678)
T KOG1180|consen 283 IAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGL 362 (678)
T ss_pred EEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHH
Confidence 3689999999999888999999999887632 1 1111 1245788999999999999886541
Q ss_pred ---------------C--CC--------------CCCCCCceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccc
Q psy9665 62 ---------------P--LV--------------DQYDLSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTEL 110 (207)
Q Consensus 62 ---------------~--~~--------------~~~~l~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~ 110 (207)
- .. +..--.+||.+++||+|+++++.+.+.-.+.++ +.++||.||+
T Consensus 363 ~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~P---v~qGYGLTEt 439 (678)
T KOG1180|consen 363 QKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCP---VLQGYGLTET 439 (678)
T ss_pred HHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcccc---ccccccccch
Confidence 0 00 001123899999999999999999988888877 9999999999
Q ss_pred cceeeccCC-CCCCCccccccCCceEEEEe-CCCC------CCCcceEEEEcCeeeecccccCCCcCcc-----------
Q psy9665 111 TILVTFSDL-DVPSSSVGKVMPSMKMKVLV-KSHT------MGSQDSFVISGDEIQFAPYCRKMSLGAY----------- 171 (207)
Q Consensus 111 g~~~~~~~~-~~~~~~~G~~~~~~~~~i~d-~~~~------~g~~Gel~i~g~~~~~~gy~~~~~~~~~----------- 171 (207)
+...+.... ....+.+|.|++.++++++| +++. | ..|||||+|+.+ ..||+++++.+..
T Consensus 440 ca~~tv~e~~d~~~g~vG~pl~c~eiKLvdw~EgGY~~~~~P-PrGEI~i~G~~v-t~gY~kn~ekT~e~ft~~~G~~WF 517 (678)
T KOG1180|consen 440 CAAATVLEPEDFSTGRVGAPLPCCEIKLVDWEEGGYFAKNKP-PRGEILIGGPNV-TMGYYKNEEKTKEDFTVEDGQRWF 517 (678)
T ss_pred hcccEecChhhcccccccCCccceEEEEEEhhhcCccCCCCC-CCceEEecCCcc-ChhhhCChhhhhhhceecCCcEEE
Confidence 888777666 77788999999999999999 5554 3 589999999999 9999999977652
Q ss_pred -cCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 172 -LCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 172 -~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
|||...+..+|.+.|..|.++..+-+= ||=|||
T Consensus 518 ~TGDIGe~~pdG~LkIIDRKKdLVKlq~-GEYIsL 551 (678)
T KOG1180|consen 518 RTGDIGEFHPDGCLKIIDRKKDLVKLQN-GEYISL 551 (678)
T ss_pred eccccceecCCCcEEEeechhhhhhhcc-cceeeh
Confidence 555666666999999999998887543 333443
No 119
>KOG1179|consensus
Probab=99.84 E-value=1.3e-19 Score=148.73 Aligned_cols=196 Identities=15% Similarity=0.163 Sum_probs=153.2
Q ss_pred CcccccchHHHHHH-HHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLLL-MLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
+.++|+||++|.+. +-.++..|+|+|+-.+|+++.+|+...++++|+..-+.-+.+.|++.+......-.++|.++-.|
T Consensus 287 Y~~lPLYHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG 366 (649)
T KOG1179|consen 287 YTTLPLYHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG 366 (649)
T ss_pred EEcchhHHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC
Confidence 35799999999885 88999999999999999999999999999999999999999999999876666667899888666
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccc------cCCceEEEEeCC-CC---------
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKV------MPSMKMKVLVKS-HT--------- 143 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~------~~~~~~~i~d~~-~~--------- 143 (207)
+.++.|++|.++|+.. ++.+.||+||.....++.. .+.+++|+. +-.+++--+|++ |+
T Consensus 367 --LR~diW~~Fv~RFg~~--~IgE~YgaTEgn~~~~N~d--~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~C 440 (649)
T KOG1179|consen 367 --LRPDIWQQFVKRFGII--KIGEFYGATEGNSNLVNYD--GRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLC 440 (649)
T ss_pred --CCchHHHHHHHHcCCC--eEEEEeccccCcceeeeec--CccccccchhhhhhhccceEEEEecCCCCceeecCCceE
Confidence 9999999999999988 8999999999876665543 344444432 112332223332 22
Q ss_pred ----CCCcceEEEE----cCeeeecccccCCCcCcc---------------cCCcEEEcCeeEEEEEecCccccccccCC
Q psy9665 144 ----MGSQDSFVIS----GDEIQFAPYCRKMSLGAY---------------LCHWLKLKGKQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 144 ----~g~~Gel~i~----g~~~~~~gy~~~~~~~~~---------------~~d~~~~~~~~~~~i~grg~~~~~~~~~~ 200 (207)
+||+|.++-+ .|...|.||.+....+.. +||.+..+..|.++...|--+.. +-.|
T Consensus 441 i~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTF--RWKG 518 (649)
T KOG1179|consen 441 IPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTF--RWKG 518 (649)
T ss_pred EECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCce--eecC
Confidence 4899977633 454458999885544432 88888888899999999977777 6688
Q ss_pred Cccc
Q psy9665 201 DNIS 204 (207)
Q Consensus 201 ~~~s 204 (207)
||||
T Consensus 519 ENVs 522 (649)
T KOG1179|consen 519 ENVS 522 (649)
T ss_pred Cccc
Confidence 8887
No 120
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.78 E-value=2.7e-18 Score=140.88 Aligned_cols=168 Identities=19% Similarity=0.169 Sum_probs=126.8
Q ss_pred CcccccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 1 MALVPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 1 l~~~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
++++|++|++|+. .++.++..|+++++.+++++..+++.++.. ++++++|++++.+.+.. .+++++|. +++|
T Consensus 142 l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~----~~l~slr~-i~gG 214 (386)
T TIGR02372 142 ISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD----YRLPGVVG-VSSG 214 (386)
T ss_pred EEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC----cCCCccee-EecC
Confidence 3678999999986 477888999999999999999888888654 78899999999997753 34677875 6789
Q ss_pred CCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCCCCCcceEEEEcCeeee
Q psy9665 80 APVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHTMGSQDSFVISGDEIQF 159 (207)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~g~~Gel~i~g~~~~~ 159 (207)
+++++++++++++. +.. .+++.||+||++.+..... +...|+|.|++++++ + ++.+ .|+..
T Consensus 215 a~l~~~l~~~~~~~-g~~--~v~~~YG~TEt~~i~~~~~----~~~~~~~~p~~~~~~-~-~~~~--------~g~~~-- 275 (386)
T TIGR02372 215 APSTAATWRCLLAA-GLA--RLLEVYGATETGGIGLREA----PDDPFRLLPDLACFA-D-TLSS--------AGLAR-- 275 (386)
T ss_pred CCCCHHHHHHHHHh-ccc--chhheeccccccccccccC----CCCCcccCCCccccC-C-CccC--------CCccc--
Confidence 99999999999876 543 4899999999987654321 234577888877654 1 2111 12222
Q ss_pred cccccCCCcCcccCCcEEEcCeeEEEEEecCccccccccCCCcccc
Q psy9665 160 APYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISL 205 (207)
Q Consensus 160 ~gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s~ 205 (207)
+..++|.++++++|.+.+.||.+++. +.+|+||+.
T Consensus 276 ---------~~~tgD~g~~d~~G~l~i~GR~dd~I--k~~G~~V~p 310 (386)
T TIGR02372 276 ---------RLDLQDRLAWDKDGGFTILGRKDEIL--QVGGVNVSP 310 (386)
T ss_pred ---------eeecCceEEEcCCCcEEEecccCCEE--EECCEEEcH
Confidence 12368888888899999999988777 458888875
No 121
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.77 E-value=9.7e-18 Score=139.46 Aligned_cols=178 Identities=13% Similarity=0.095 Sum_probs=121.7
Q ss_pred HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCC--CCCCceeEEEEccCCCCHHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQ--YDLSSLTNIRCGAAPVGKSTLDQVG 91 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~~~~~G~~~~~~~~~~~~ 91 (207)
..+.++..|++++..+..+++.+++.|+++++++++++|+++..|++...... ....++|.++++|+++++++.+.+.
T Consensus 137 ~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~ 216 (422)
T TIGR02155 137 AHYGAEKLGCTVVPISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIE 216 (422)
T ss_pred HHHHHHHcCcEEEecCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHH
Confidence 45567788999988887788999999999999999999999998876432222 2235899999999999999999999
Q ss_pred HHhCCCcCcceeccccccccc-eeeccCCCCCCCcccccc--CCceEEEEeC-CCC---CCCcceEEEEcCeeeeccccc
Q psy9665 92 ERLGLSMDSMKQGYGMTELTI-LVTFSDLDVPSSSVGKVM--PSMKMKVLVK-SHT---MGSQDSFVISGDEIQFAPYCR 164 (207)
Q Consensus 92 ~~~~~~~~~i~~~YG~tE~g~-~~~~~~~~~~~~~~G~~~--~~~~~~i~d~-~~~---~g~~Gel~i~g~~~~~~gy~~ 164 (207)
+.|+.. +++.||+||+++ .+........ .|.++ +.+.++|+|+ ++. +|+.|||++++... ..
T Consensus 217 ~~~g~~---v~~~YG~tE~~~~~~~~~~~~~~---~g~~~~~~~~~~eivd~~~g~~v~~Ge~Gelvvt~~~~--~~--- 285 (422)
T TIGR02155 217 ARLGMK---ATDIYGLSEVIGPGVAMECVETQ---DGLHIWEDHFYPEIIDPHTGEVLPDGEEGELVFTTLTK--EA--- 285 (422)
T ss_pred HHhCCc---eEecccchhhcCCceeecccccC---CCceEecCeeEEEEECCCCCCCCCCCCeeEEEEecCCc--cc---
Confidence 999965 999999999853 2221111111 22333 3567889995 555 48999999997643 11
Q ss_pred CCCcCcccCCcEEEcCe-e-----EEEEEecCccccccccCCCccc
Q psy9665 165 KMSLGAYLCHWLKLKGK-Q-----TVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 165 ~~~~~~~~~d~~~~~~~-~-----~~~i~grg~~~~~~~~~~~~~s 204 (207)
.|...+.+||..++.++ | ...+.||.++.. ..+|.||+
T Consensus 286 ~p~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i--~~~G~~v~ 329 (422)
T TIGR02155 286 LPVIRYRTRDLTRLLPGTARTMRRMDRITGRSDDML--IIRGVNVF 329 (422)
T ss_pred cceeeEEcCcEEEEECCCCCcccccccccCccCCeE--EECCEEEC
Confidence 13334456665555432 1 134555544444 33455543
No 122
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.66 E-value=4.1e-15 Score=129.75 Aligned_cols=196 Identities=16% Similarity=0.192 Sum_probs=154.9
Q ss_pred cccchHHHHHHHHHHHHhCCeEEEeCC---CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCC--CCCCceeEEEEc
Q psy9665 4 VPFFHGYGLLLMLQAICMNNKLVVLPH---FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQ--YDLSSLTNIRCG 78 (207)
Q Consensus 4 ~Pl~h~~g~~~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~~~~~ 78 (207)
.++.+..+...++.++..|+++++.+. .++..+.+.++++++|++..+|.++..++....... .....+|.++++
T Consensus 414 ~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~g 493 (642)
T COG1020 414 ASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSG 493 (642)
T ss_pred CCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEc
Confidence 445566677789999999999999883 589999999999999999999999999988733222 223359999999
Q ss_pred cCCCCHHHHHHHHHHhC-CCcCcceeccccccccceeeccCC-CCC--CCccccccCCceEEEEeCCCCC---CCcceEE
Q psy9665 79 AAPVGKSTLDQVGERLG-LSMDSMKQGYGMTELTILVTFSDL-DVP--SSSVGKVMPSMKMKVLVKSHTM---GSQDSFV 151 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~-~~~~~i~~~YG~tE~g~~~~~~~~-~~~--~~~~G~~~~~~~~~i~d~~~~~---g~~Gel~ 151 (207)
|+.++.++.+++..... .. .+.+.||.||+......... ... ...+|+|+++..+.|.|+..++ +..||++
T Consensus 494 Ge~l~~~~~~~~~~~~~~~~--~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~gel~ 571 (642)
T COG1020 494 GEALPLALVQRLLQLAALAR--RLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVPGELY 571 (642)
T ss_pred CCCCCHHHHHHHHHhccccc--eEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCCeeeE
Confidence 99999999999987764 23 59999999996554443333 111 4589999999999999966663 7889999
Q ss_pred EEcCeeeecccccCCCcCc---------ccCCcEEEcCeeEEEEEecCccccccccCCCccc
Q psy9665 152 ISGDEIQFAPYCRKMSLGA---------YLCHWLKLKGKQTVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 152 i~g~~~~~~gy~~~~~~~~---------~~~d~~~~~~~~~~~i~grg~~~~~~~~~~~~~s 204 (207)
|.|..+ ..||++.|+.+. .+||..+...+|.+..+||..... .+.|..|.
T Consensus 572 i~g~~~-a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qv--ki~g~Rie 630 (642)
T COG1020 572 IAGLGL-ALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQV--KIRGFRIE 630 (642)
T ss_pred ECCcch-hhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEecccccee--EeceEecC
Confidence 999999 999999997653 478888888899999999955555 44565553
No 123
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.65 E-value=4.4e-15 Score=124.32 Aligned_cols=144 Identities=18% Similarity=0.132 Sum_probs=102.7
Q ss_pred cccchHHHHH-HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCC--CCCCceeEEEEccC
Q psy9665 4 VPFFHGYGLL-LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQ--YDLSSLTNIRCGAA 80 (207)
Q Consensus 4 ~Pl~h~~g~~-~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--~~l~~lr~~~~~G~ 80 (207)
.|+.+..+.. ..+++...|++++.... ....++.+++++++++.++|+.+..|++...... ....++|.++++|+
T Consensus 137 ~~~~~~~g~~~~~~~~~~~Ga~vi~~~~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE 214 (445)
T TIGR03335 137 ASYGMNVGANTMTLAAREVGMSIIPEGK--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGE 214 (445)
T ss_pred ecCCcchhHHHHHHHHHHcCCEEEcCCc--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCC
Confidence 3555544544 45666788988765443 3456899999999999999999887765432222 12368999999999
Q ss_pred CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCC----CCCcceEEEEcCe
Q psy9665 81 PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHT----MGSQDSFVISGDE 156 (207)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~----~g~~Gel~i~g~~ 156 (207)
++++++.+++.+.|+.+ +++.||+||++....+. .. .....+.+.+.++|+|+++. +|+.|||+++.-.
T Consensus 215 ~l~~~~r~~ie~~~g~~---v~~~YG~TE~~~~~~c~---~~-~g~h~~~d~~~vEIvDp~~~~~vp~Ge~GELvvT~L~ 287 (445)
T TIGR03335 215 SFADESRNYVEELWGCE---VYNTYGSTEGTMCGECQ---AV-AGLHVPEDLVHLDVYDPRHQRFLPDGECGRIVLTTLL 287 (445)
T ss_pred CCCHHHHHHHHHHhCCc---EEecCChhhhhheEEec---CC-CCccccCCceEEEEEcCCCCCCCcCCCceEEEEEecC
Confidence 99999999999999976 99999999986332211 11 11122234578999998865 4899999998653
No 124
>PTZ00297 pantothenate kinase; Provisional
Probab=99.55 E-value=3.2e-14 Score=131.57 Aligned_cols=176 Identities=14% Similarity=0.112 Sum_probs=116.5
Q ss_pred CcccccchHHHHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCC----CC------------
Q psy9665 1 MALVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSP----LV------------ 64 (207)
Q Consensus 1 l~~~Pl~h~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----~~------------ 64 (207)
++++||+|+++....+.++..|+++.+ +++..+++.++++++|+++++|.++..+.+.. ..
T Consensus 649 Ls~LPLaHI~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A 725 (1452)
T PTZ00297 649 VHFTPFAMLFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERA 725 (1452)
T ss_pred EEechHHHHHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 468999999997777788999999864 57899999999999999999999999765310 00
Q ss_pred ----------CCCC----------------CCceeEEEEccC--CCCHHHHHHHHHHhCCCcCcceeccccccccceeec
Q psy9665 65 ----------DQYD----------------LSSLTNIRCGAA--PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTF 116 (207)
Q Consensus 65 ----------~~~~----------------l~~lr~~~~~G~--~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~ 116 (207)
.+.. -.++|.+++||+ +++..+.. +. ++..+||+||+. ...
T Consensus 726 ~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------~i---~i~~g~glTE~~--~~~ 794 (1452)
T PTZ00297 726 FQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------HI---SVCYVPCLREVF--FLP 794 (1452)
T ss_pred HHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------Cc---eEEEecceEEee--eec
Confidence 0000 036888888873 44433322 33 377899999953 222
Q ss_pred cCCCCCCCccccccCCceEEEEeCCC--CCCCcceEEEEcCeeeecccccCCCcCccc-CCcEEEcCeeEEEEEecCccc
Q psy9665 117 SDLDVPSSSVGKVMPSMKMKVLVKSH--TMGSQDSFVISGDEIQFAPYCRKMSLGAYL-CHWLKLKGKQTVLVLGFGSQS 193 (207)
Q Consensus 117 ~~~~~~~~~~G~~~~~~~~~i~d~~~--~~g~~Gel~i~g~~~~~~gy~~~~~~~~~~-~d~~~~~~~~~~~i~grg~~~ 193 (207)
.+.... ..|.|+|++++||.+.+. .+...|||+++ |+++|+.|... ++|+ .+|.+.|.||.+++
T Consensus 795 ~~~~~~--~~G~PlpgvEvKI~~~~E~~~~~~~GEIlvr--------~~kdpe~T~e~~~gW~---~dG~L~IidRkKdl 861 (1452)
T PTZ00297 795 SEGVFC--VDGTPAPSLQVDLEPFDEPSDGAGIGQLVLA--------KKGEPRRTLPIAAQWK---RDRTLRLLGPPLGI 861 (1452)
T ss_pred CCCCcc--cCCeecCceEEEEcccccccCCCCCCeEEEE--------ECCChHHHHHhhCcCc---cCCeEEEEeccccc
Confidence 222222 239999999999987422 23446999985 34777766543 4454 35666666665555
Q ss_pred cccccCCCccc
Q psy9665 194 CEENLGADNIS 204 (207)
Q Consensus 194 ~~~~~~~~~~s 204 (207)
.+- -+|+||+
T Consensus 862 ikl-s~GEyVa 871 (1452)
T PTZ00297 862 LLP-VAYEYVI 871 (1452)
T ss_pred eEC-CCCcEEc
Confidence 542 3444443
No 125
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.46 E-value=9.2e-13 Score=107.59 Aligned_cols=182 Identities=16% Similarity=0.191 Sum_probs=127.9
Q ss_pred HHHHHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCC--CCCCCceeEEEEccCCCCHHHHH
Q psy9665 11 GLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVD--QYDLSSLTNIRCGAAPVGKSTLD 88 (207)
Q Consensus 11 g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--~~~l~~lr~~~~~G~~~~~~~~~ 88 (207)
|+...+++--.|++++-..+-+-+..++++..++++++.++|+.+..|++..... ..+-.++|.+++|+|+++++.++
T Consensus 149 g~~~~~ga~rig~~vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~ 228 (438)
T COG1541 149 GLGLHYGAERIGATVIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRK 228 (438)
T ss_pred CchhHHHHHhhCEEEEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHH
Confidence 3334555555677776665667888999999999999999999999998865544 23346899999999999999999
Q ss_pred HHHHHhCCCcCcceecccccccccee-eccCCCCCCCccccccCCceEEEEeCCCC----CCCcceEEEEcCeee---ec
Q psy9665 89 QVGERLGLSMDSMKQGYGMTELTILV-TFSDLDVPSSSVGKVMPSMKMKVLVKSHT----MGSQDSFVISGDEIQ---FA 160 (207)
Q Consensus 89 ~~~~~~~~~~~~i~~~YG~tE~g~~~-~~~~~~~~~~~~G~~~~~~~~~i~d~~~~----~g~~Gel~i~g~~~~---~~ 160 (207)
.+.++|++. .++.||+||..+.. ..... . . -.--..+...+.|+|++.. +|+.|||+++.-.-. .-
T Consensus 229 ~ie~~~g~~---~~diYGltE~~g~g~~eC~~-~-~-glhi~eD~~~~Ei~dP~t~e~l~dge~GelV~T~L~~~~~PlI 302 (438)
T COG1541 229 VIENRFGCK---AFDIYGLTEGFGPGAGECTE-R-N-GLHIWEDHFIFEIVDPETGEQLPDGERGELVITTLTKEGMPLI 302 (438)
T ss_pred HHHHHhCCc---eeeccccccccCCccccccc-c-c-CCCcchhhceeeeecCCcCccCCCCCeeEEEEEeccccCcceE
Confidence 999999987 89999999986663 11111 1 1 1122346788999996554 388899999753210 12
Q ss_pred ccccCCCcCcccC----------CcEEEcCeeEEEEEecCccccccccC
Q psy9665 161 PYCRKMSLGAYLC----------HWLKLKGKQTVLVLGFGSQSCEENLG 199 (207)
Q Consensus 161 gy~~~~~~~~~~~----------d~~~~~~~~~~~i~grg~~~~~~~~~ 199 (207)
.| +..|.+.... -..++.||-+..+..+|.++++.+++
T Consensus 303 RY-rtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie 350 (438)
T COG1541 303 RY-RTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIE 350 (438)
T ss_pred EE-EcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHH
Confidence 23 3333332110 13356667788888888888887654
No 126
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=98.96 E-value=1e-08 Score=85.26 Aligned_cols=109 Identities=11% Similarity=0.114 Sum_probs=79.7
Q ss_pred CHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCCCCHHHHHHHHHHhCCCcCcceecccccccc
Q psy9665 32 DGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELT 111 (207)
Q Consensus 32 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g 111 (207)
+.+..++.|++++++++.+.|+++..|++.......+ .++|.++++||+++++..+.+.+.||++ +++.||+|| |
T Consensus 175 ~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~fg~~---V~~~YG~tE-g 249 (430)
T TIGR02304 175 PFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVFKNT---VHQIYQATE-G 249 (430)
T ss_pred CHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHhCCC---eeEccCCch-h
Confidence 4678899999999999999999999998854333323 4689999999999999999999999987 999999999 5
Q ss_pred ceeeccCCCCCCCcccccc-CCceEE--EEeCCCCCCCcceEEEEc
Q psy9665 112 ILVTFSDLDVPSSSVGKVM-PSMKMK--VLVKSHTMGSQDSFVISG 154 (207)
Q Consensus 112 ~~~~~~~~~~~~~~~G~~~-~~~~~~--i~d~~~~~g~~Gel~i~g 154 (207)
.++..... +.. +.. ..+-++ ++|+++. ++.+|++
T Consensus 250 ~la~eC~~----g~l-Hl~ed~~~vE~~ivD~~~~----~~~ViT~ 286 (430)
T TIGR02304 250 FLASTCRC----GTL-HLNEDLVHIEKQYLDEHKR----FVPIITD 286 (430)
T ss_pred heEEecCC----CCE-EEccccEEEEeeEECCCCc----eEEEEec
Confidence 54433221 211 222 233444 7887753 3445543
No 127
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=97.82 E-value=0.0011 Score=54.34 Aligned_cols=161 Identities=16% Similarity=0.181 Sum_probs=96.2
Q ss_pred HHhCCeEEEeC--CCCHHHHHHHH----HhcCceEeeccHHHHHHHHhCCCC--CCCCCC-ceeEEEEcc------CCCC
Q psy9665 19 ICMNNKLVVLP--HFDGHLFLSSI----EKYRVTLLPAVPPLVVFLAKSPLV--DQYDLS-SLTNIRCGA------APVG 83 (207)
Q Consensus 19 l~~G~~~v~~~--~~~~~~~~~~i----~~~~~t~~~~~P~~~~~l~~~~~~--~~~~l~-~lr~~~~~G------~~~~ 83 (207)
++.+.. ++.. .++.+.+++.+ ++.++..+++.|.++..++...+. ....++ ..+.+-.|| +.++
T Consensus 162 ~~~~~~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~ 240 (365)
T PF04443_consen 162 LFFGSR-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVS 240 (365)
T ss_pred cccCce-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccC
Confidence 344555 4544 46777666655 456788899999887766543221 123444 355555665 4565
Q ss_pred -HHHHHHHHHHhCC-CcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCC----CCCcceEEEEcCee
Q psy9665 84 -KSTLDQVGERLGL-SMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHT----MGSQDSFVISGDEI 157 (207)
Q Consensus 84 -~~~~~~~~~~~~~-~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~----~g~~Gel~i~g~~~ 157 (207)
++..+.+.+.||. +...+++.|||||...+...... +. ...|.. +.|+|++.- +|++|-|.+-.+..
T Consensus 241 r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~----~~--~~~p~w-V~iRDp~tl~~~~~Ge~Gli~vidl~~ 313 (365)
T PF04443_consen 241 REEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGH----GH--FHVPPW-VIIRDPETLEPLPPGETGLIQVIDLAN 313 (365)
T ss_pred HHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCC----Cc--ccCCCe-EEEECCCCCcCCCCCCeeEEEEEcccc
Confidence 5677777788987 33379999999997765444322 11 122222 667787643 48899998876654
Q ss_pred eecccccCCCcCcccCCcEEEcCe--------eEEEEEecCccc
Q psy9665 158 QFAPYCRKMSLGAYLCHWLKLKGK--------QTVLVLGFGSQS 193 (207)
Q Consensus 158 ~~~gy~~~~~~~~~~~d~~~~~~~--------~~~~i~grg~~~ 193 (207)
..| |-. -.|+|...+.++ ..+.++||-.+.
T Consensus 314 --~s~---p~~-IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~a 351 (365)
T PF04443_consen 314 --TSY---PGF-ILTEDLGVLHGDDDCGCRKGKYFEVLGRADGA 351 (365)
T ss_pred --cCC---CcE-EEEcceeeecCCCCCCCccCCEEEEEeCCCCC
Confidence 222 211 236666655443 368888885543
No 128
>KOG3628|consensus
Probab=97.78 E-value=0.0003 Score=63.45 Aligned_cols=159 Identities=11% Similarity=0.082 Sum_probs=98.7
Q ss_pred ccchHHHHH-HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCce------e
Q psy9665 5 PFFHGYGLL-LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSL------T 73 (207)
Q Consensus 5 Pl~h~~g~~-~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~l------r 73 (207)
+.+-..|+. .++..+++|...++.++ -+|..|++.++++++.-++.+=..+..+.+.......+++.. .
T Consensus 992 ~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s 1071 (1363)
T KOG3628|consen 992 SPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSS 1071 (1363)
T ss_pred cCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccc
Confidence 344445555 47888999999888774 389999999999999988877666666655433222222211 3
Q ss_pred EEEEccCCCCHHHHHHHHHHhC---CCcCcceeccccccccceeecc----CC------------CC-------------
Q psy9665 74 NIRCGAAPVGKSTLDQVGERLG---LSMDSMKQGYGMTELTILVTFS----DL------------DV------------- 121 (207)
Q Consensus 74 ~~~~~G~~~~~~~~~~~~~~~~---~~~~~i~~~YG~tE~g~~~~~~----~~------------~~------------- 121 (207)
.++..=++....+.+.|.+.|. .....+-..|+.-= ...+..+ ++ ..
T Consensus 1072 ~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~-Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l 1150 (1363)
T KOG3628|consen 1072 IVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRV-NPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSL 1150 (1363)
T ss_pred eeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccC-ChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcc
Confidence 4444556667777887777662 11001333343221 1111111 00 00
Q ss_pred CCCccccccCCceEEEEeCCCC----CCCcceEEEEcCeeeecccccC
Q psy9665 122 PSSSVGKVMPSMKMKVLVKSHT----MGSQDSFVISGDEIQFAPYCRK 165 (207)
Q Consensus 122 ~~~~~G~~~~~~~~~i~d~~~~----~g~~Gel~i~g~~~~~~gy~~~ 165 (207)
.....|...+++++.|++++.+ +|+.||||+.+.+. ..+|++.
T Consensus 1151 ~L~dSG~~~~~~~i~IvnPEtk~pc~dge~GEIW~~S~hn-A~~~~~~ 1197 (1363)
T KOG3628|consen 1151 LLYDSGKLPVYTDIAIVNPETKGPCRDGELGEIWVNSAHN-ASCSFTI 1197 (1363)
T ss_pred ccccCCcccccceeEEeCCccccccccCCcceEEeccccc-ccccccc
Confidence 1123588889999999999887 49999999999988 5556544
No 129
>KOG3628|consensus
Probab=97.38 E-value=0.0018 Score=58.74 Aligned_cols=182 Identities=17% Similarity=0.111 Sum_probs=111.2
Q ss_pred HHHH-HHHHHHHhCCeEEEeCC---CCHHHHHHHHHhcCceEeeccHHHHHH----HHhCCCC-------CCCCCCceeE
Q psy9665 10 YGLL-LMLQAICMNNKLVVLPH---FDGHLFLSSIEKYRVTLLPAVPPLVVF----LAKSPLV-------DQYDLSSLTN 74 (207)
Q Consensus 10 ~g~~-~~~~~l~~G~~~v~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~----l~~~~~~-------~~~~l~~lr~ 74 (207)
.|++ .++.++++|.|.+.+++ ..|..+.+++.+++++++..=-..+.. +...+.. ..-+++++|.
T Consensus 323 lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~d~sslk~ 402 (1363)
T KOG3628|consen 323 LGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTPDLSSLKG 402 (1363)
T ss_pred cchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCCCccceee
Confidence 4554 38889999999999995 678899999999999976432112221 1111111 1246789999
Q ss_pred EEEccCCCCHHHHHHHHHHh----CCCcC---------------cceeccccccccceeeccCC--C-C-----------
Q psy9665 75 IRCGAAPVGKSTLDQVGERL----GLSMD---------------SMKQGYGMTELTILVTFSDL--D-V----------- 121 (207)
Q Consensus 75 ~~~~G~~~~~~~~~~~~~~~----~~~~~---------------~i~~~YG~tE~g~~~~~~~~--~-~----------- 121 (207)
++..-..+..+...--.+++ |.... ..+..=+++|.+......+. . .
T Consensus 403 C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~ 482 (1363)
T KOG3628|consen 403 CMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEA 482 (1363)
T ss_pred eEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccc
Confidence 99999999888655444433 22200 01223334555544444332 0 0
Q ss_pred -----------------CCCccccccCC-ceEEEEeCCCC----CCCcceEEEEcCeeeecccccCCCcCcc--------
Q psy9665 122 -----------------PSSSVGKVMPS-MKMKVLVKSHT----MGSQDSFVISGDEIQFAPYCRKMSLGAY-------- 171 (207)
Q Consensus 122 -----------------~~~~~G~~~~~-~~~~i~d~~~~----~g~~Gel~i~g~~~~~~gy~~~~~~~~~-------- 171 (207)
....+|...|+ +.+.+++++.+ ++++|||||.+++. ...||.-+..+..
T Consensus 483 L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~eVGEIwVsS~~~-~~~~~al~~~t~~~F~~~~~~ 561 (1363)
T KOG3628|consen 483 LKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDEVGEIWVSSNSL-GKLFYALDKQTENTFKATPVE 561 (1363)
T ss_pred cccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCcceeEEEecCCc-ccceeeccccccceEEeeecc
Confidence 22245655555 45667777665 59999999999999 8889877755432
Q ss_pred ------------cCCcEEEcCeeEEEEEecCcc
Q psy9665 172 ------------LCHWLKLKGKQTVLVLGFGSQ 192 (207)
Q Consensus 172 ------------~~d~~~~~~~~~~~i~grg~~ 192 (207)
+-+.+-+.+.|.++++|..++
T Consensus 562 s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d 594 (1363)
T KOG3628|consen 562 SSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKED 594 (1363)
T ss_pred ccCCCCccchhhhhcceeeeeCCeEEEEEechh
Confidence 334444444567777765443
No 130
>KOG1178|consensus
Probab=97.00 E-value=0.0089 Score=54.79 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=70.3
Q ss_pred HHHHHHhCCeEEEeCCC---CHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCC-------------CCCCCceeEEEEc
Q psy9665 15 MLQAICMNNKLVVLPHF---DGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVD-------------QYDLSSLTNIRCG 78 (207)
Q Consensus 15 ~~~~l~~G~~~v~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------~~~l~~lr~~~~~ 78 (207)
..+.++.|+.+..+-+. ++..+.+.+++++++..+.+|++.+.+....... ....+.++....+
T Consensus 256 ~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~ 335 (1032)
T KOG1178|consen 256 IGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLG 335 (1032)
T ss_pred HhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeec
Confidence 44556666666665544 3789999999999999999999988876643321 1122368999999
Q ss_pred cCCCCHHHHHHHHHHhCCCcCcceeccccccccceeec
Q psy9665 79 AAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTF 116 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~ 116 (207)
|++....+...+.+.+..- -+..-|+.++..+....
T Consensus 336 ~ep~~v~l~~s~~~~~~~~--~~~~~y~s~~~~~~~s~ 371 (1032)
T KOG1178|consen 336 GEPLLVSLYTSTFDLLAEI--FFGLPYLSTDPTGLVSY 371 (1032)
T ss_pred CCccchhhhhhhhhcccce--eeeecccCCCCccceeH
Confidence 9999999998777665432 23445888876655544
No 131
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=92.50 E-value=0.8 Score=39.73 Aligned_cols=120 Identities=16% Similarity=0.171 Sum_probs=63.9
Q ss_pred CCceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCc-eEEEEeCCC-----
Q psy9665 69 LSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSM-KMKVLVKSH----- 142 (207)
Q Consensus 69 l~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~-~~~i~d~~~----- 142 (207)
.++|+.+.+-+..-.....+++++.+|.. ..+-..|++||+- +.+... .. ...+.+.++. -.+.++.+.
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~-~~~~~~y~ASEg~-i~i~~~-~~--~~~~~l~~~~~ffEFip~~~~~~~~ 340 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGV-PIQSKGYGASEGF-IGIPLD-PE--DPGYVLAPDSGFFEFIPVDEDEQNP 340 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS--EEE-EEEETTEE-EEEES--CC--C--EEE-TTSSEEEEEE-STT----
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCC-ceeeccccccceE-EEEecC-CC--CCceEeecCCeEEEEEeccCCcccc
Confidence 57899776666556667778888888863 1455999999963 333221 11 1122223332 344444332
Q ss_pred ----C--------CCCcceEEEEcCeeeecccccCCCcCcccCCcEEEcC--ee--EEEEEecCccccccccCCCccc
Q psy9665 143 ----T--------MGSQDSFVISGDEIQFAPYCRKMSLGAYLCHWLKLKG--KQ--TVLVLGFGSQSCEENLGADNIS 204 (207)
Q Consensus 143 ----~--------~g~~Gel~i~g~~~~~~gy~~~~~~~~~~~d~~~~~~--~~--~~~i~grg~~~~~~~~~~~~~s 204 (207)
+ .|+.=||+|+...- +=. +..||.+++.+ .. .+.++||...+. ++-|||++
T Consensus 341 ~~~~~~l~~~ele~G~~YelviTt~~G-LyR--------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l--~l~gEkl~ 407 (528)
T PF03321_consen 341 SEQPKTLLLHELEVGEEYELVITTNSG-LYR--------YRIGDVVRVTGFYNQTPRIEFVGRRGQVL--SLFGEKLS 407 (528)
T ss_dssp ---SSSEEGGG--TT-EEEEEEESTTS--SS--------EEECEEEEEEEEETTEEEEEEEEETTEEE---SSS--EE
T ss_pred cCCCceecHHHhcCCCeEEEEEecccc-eee--------eecCCEEEEeeccCCCcEEEEeccCCcee--ecceeecC
Confidence 1 14455777765543 222 34788888887 44 688888887766 66777765
No 132
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=78.61 E-value=7.8 Score=27.15 Aligned_cols=45 Identities=9% Similarity=0.007 Sum_probs=33.9
Q ss_pred chHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 7 FHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 7 ~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.|..|... ....-..|-.++.+. ...++.+.+.+.++++.++..+
T Consensus 15 ~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS 61 (137)
T PRK02261 15 CHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVS 61 (137)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEc
Confidence 47788764 333445688888887 5678999999999999886544
No 133
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=78.09 E-value=50 Score=29.42 Aligned_cols=43 Identities=5% Similarity=-0.133 Sum_probs=29.2
Q ss_pred CCceeEEEEccCCCCHHHHHHHHHHhCC-CcCcceeccccccccce
Q psy9665 69 LSSLTNIRCGAAPVGKSTLDQVGERLGL-SMDSMKQGYGMTELTIL 113 (207)
Q Consensus 69 l~~lr~~~~~G~~~~~~~~~~~~~~~~~-~~~~i~~~YG~tE~g~~ 113 (207)
.+++|+|.+-...-.......++..++. + .+-..|++||+-..
T Consensus 303 WP~lk~I~~~~tGsm~~Y~p~L~~y~gglp--l~~~~Y~ASE~~~g 346 (612)
T PLN02620 303 WPNTKYVDVIVTGTMSQYIPTLDYYSNGLP--LVCTMYASSECYFG 346 (612)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCc--cccccccccceEEE
Confidence 4678888776555666666777766653 3 34589999996433
No 134
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=77.72 E-value=8.6 Score=28.70 Aligned_cols=79 Identities=14% Similarity=0.146 Sum_probs=48.7
Q ss_pred chHHHHHHHH-HHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHH------HHHHhCCCCCCCCC-CceeEEEE
Q psy9665 7 FHGYGLLLML-QAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLV------VFLAKSPLVDQYDL-SSLTNIRC 77 (207)
Q Consensus 7 ~h~~g~~~~~-~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~------~~l~~~~~~~~~~l-~~lr~~~~ 77 (207)
.|..|..++. ..-..|-.++.+. ...++.+.+.+++.++.++..+-++. +.+.+..+ ...+ ++++ +++
T Consensus 96 ~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~--~~~~~~~v~-i~v 172 (197)
T TIGR02370 96 VHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLK--EEGYRDSVK-FMV 172 (197)
T ss_pred hhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHH--HcCCCCCCE-EEE
Confidence 5888876533 3344577777676 56889999999999999866542221 22222211 1111 2344 788
Q ss_pred ccCCCCHHHHH
Q psy9665 78 GAAPVGKSTLD 88 (207)
Q Consensus 78 ~G~~~~~~~~~ 88 (207)
||.+++++..+
T Consensus 173 GG~~~~~~~~~ 183 (197)
T TIGR02370 173 GGAPVTQDWAD 183 (197)
T ss_pred EChhcCHHHHH
Confidence 99999876433
No 135
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=77.29 E-value=23 Score=26.46 Aligned_cols=78 Identities=13% Similarity=0.121 Sum_probs=47.2
Q ss_pred chHHHHHHHHHH-HHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHH---HHHHH---HhCCCCCCCCCCceeEEEEc
Q psy9665 7 FHGYGLLLMLQA-ICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPP---LVVFL---AKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 7 ~h~~g~~~~~~~-l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~---~~~~l---~~~~~~~~~~l~~lr~~~~~ 78 (207)
.|..|..++... -..|-.++.+. ...++.+.+.+.+.++.++..+-+ ....+ .+..+... ....++ ++.|
T Consensus 94 ~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~-~~~~~~-i~vG 171 (201)
T cd02070 94 IHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAG-LRDKVK-VMVG 171 (201)
T ss_pred cchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCC-CCcCCe-EEEE
Confidence 478887654333 35688877666 568899999999999998654432 22222 22111111 011343 7788
Q ss_pred cCCCCHHH
Q psy9665 79 AAPVGKST 86 (207)
Q Consensus 79 G~~~~~~~ 86 (207)
|.+++++.
T Consensus 172 G~~~~~~~ 179 (201)
T cd02070 172 GAPVNQEF 179 (201)
T ss_pred CCcCCHHH
Confidence 88888764
No 136
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=76.73 E-value=12 Score=28.40 Aligned_cols=79 Identities=11% Similarity=0.055 Sum_probs=51.2
Q ss_pred chHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHH---HHH---HHhCCCCCCCCCCceeEEEEc
Q psy9665 7 FHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPL---VVF---LAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 7 ~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~---~~~---l~~~~~~~~~~l~~lr~~~~~ 78 (207)
.|..|... ....-..|-.++.+. +..++.+.+.+.++++.++..+-.+ ... +++... ... .+++ +++|
T Consensus 100 ~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~~~~~~i~~L~--~~~-~~~~-i~vG 175 (213)
T cd02069 100 VHDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLDEMVEVAEEMN--RRG-IKIP-LLIG 175 (213)
T ss_pred hhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHHHHHHHHHHHH--hcC-CCCe-EEEE
Confidence 47777764 333345688888887 5789999999999999986554222 222 222111 111 2444 7788
Q ss_pred cCCCCHHHHHH
Q psy9665 79 AAPVGKSTLDQ 89 (207)
Q Consensus 79 G~~~~~~~~~~ 89 (207)
|.+++++..+.
T Consensus 176 G~~~~~~~~~~ 186 (213)
T cd02069 176 GAATSRKHTAV 186 (213)
T ss_pred ChhcCHHHHhh
Confidence 99999988765
No 137
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=72.93 E-value=1.8 Score=37.54 Aligned_cols=40 Identities=23% Similarity=0.272 Sum_probs=34.6
Q ss_pred ccccCCCcCcccC-CcEEEcCeeEEEEEecCccccccccCC
Q psy9665 161 PYCRKMSLGAYLC-HWLKLKGKQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 161 gy~~~~~~~~~~~-d~~~~~~~~~~~i~grg~~~~~~~~~~ 200 (207)
||++..|+..... +++++.||.+..|...|.|+++.+++.
T Consensus 401 gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~ 441 (534)
T COG0318 401 GWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEA 441 (534)
T ss_pred CeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHH
Confidence 7899999986654 699999999999999999999987753
No 138
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=71.15 E-value=76 Score=28.29 Aligned_cols=44 Identities=9% Similarity=-0.121 Sum_probs=29.5
Q ss_pred CCceeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccce
Q psy9665 69 LSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTIL 113 (207)
Q Consensus 69 l~~lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~ 113 (207)
.+++|+|.+--..-.......++..+|... .+-..|++||+-..
T Consensus 292 WP~lk~I~~~~tGsm~~Y~~~L~~y~gglp-l~s~~Y~sSE~~~g 335 (606)
T PLN02247 292 WPRTKYIEVIVTGSMAQYIPTLEFYSGGLP-LVSTMYASSECYFG 335 (606)
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHcCCCc-eecccccccceEEE
Confidence 477888877555567777778876665420 24479999996433
No 139
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=67.18 E-value=34 Score=22.89 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=33.7
Q ss_pred chHHHHHHHHHHH-HhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH
Q psy9665 7 FHGYGLLLMLQAI-CMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP 52 (207)
Q Consensus 7 ~h~~g~~~~~~~l-~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P 52 (207)
.|..|+.++...+ ..|-.++.+. ...++.+.+.+.+.++.++..+-
T Consensus 11 ~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 11 GHDIGKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred hhhHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 5888876544444 3677776765 56789999999999998866553
No 140
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=65.98 E-value=3.2 Score=36.63 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=34.5
Q ss_pred cccccCCCcCcccCCcEEEcCeeEEEEEecCccccccccCC
Q psy9665 160 APYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 160 ~gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~ 200 (207)
.||+++.|..+..++++++.||.+..|.-+|.++.+.+++.
T Consensus 463 ~gw~~TGDlg~~~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~ 503 (631)
T PRK07769 463 ALWVRTGDYGVYFDGELYITGRVKDLVIIDGRNHYPQDLEY 503 (631)
T ss_pred CCeeeccccccEECCEEEEEcccccEEEECCeeeCHHHHHH
Confidence 47888889888778899999988888888999998887763
No 141
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=65.44 E-value=31 Score=22.94 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=34.1
Q ss_pred ccchHHHHHHHHHHHHh-CCeEEEeC-CCCHHHHHHHHHhcCceEeec
Q psy9665 5 PFFHGYGLLLMLQAICM-NNKLVVLP-HFDGHLFLSSIEKYRVTLLPA 50 (207)
Q Consensus 5 Pl~h~~g~~~~~~~l~~-G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 50 (207)
...|..|+..+...+-. |-.+.+.+ ..+++.+.+.+.+.++.++..
T Consensus 10 ~~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~i 57 (121)
T PF02310_consen 10 GEVHPLGLLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGI 57 (121)
T ss_dssp TSSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEE
T ss_pred CcchhHHHHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEE
Confidence 34567787776666665 88888886 456899999999998888654
No 142
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=64.47 E-value=55 Score=25.08 Aligned_cols=83 Identities=12% Similarity=0.171 Sum_probs=48.2
Q ss_pred hHHHHHHHHHHHH-hCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCC----CCCCCCCceeEEEEccCC
Q psy9665 8 HGYGLLLMLQAIC-MNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPL----VDQYDLSSLTNIRCGAAP 81 (207)
Q Consensus 8 h~~g~~~~~~~l~-~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~----~~~~~l~~lr~~~~~G~~ 81 (207)
|.-|-..+..-+- +|--++-+. +..++.+.+..+++++..+..+-.+-..+..... .....++.=-.+..||+|
T Consensus 117 HdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGGAp 196 (227)
T COG5012 117 HDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGGAP 196 (227)
T ss_pred HHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecCcc
Confidence 5666543322222 344555454 5678999999999999998776554433322100 011112222235669999
Q ss_pred CCHHHHHHH
Q psy9665 82 VGKSTLDQV 90 (207)
Q Consensus 82 ~~~~~~~~~ 90 (207)
++++.++++
T Consensus 197 vtq~~a~~i 205 (227)
T COG5012 197 VTQDWADKI 205 (227)
T ss_pred ccHHHHHHh
Confidence 999988775
No 143
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=64.08 E-value=1.1e+02 Score=27.35 Aligned_cols=120 Identities=15% Similarity=0.134 Sum_probs=60.4
Q ss_pred CCc---eeEEEEccCCCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccc-cC-CceEEEEe--CC
Q psy9665 69 LSS---LTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKV-MP-SMKMKVLV--KS 141 (207)
Q Consensus 69 l~~---lr~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~-~~-~~~~~i~d--~~ 141 (207)
.++ +.++..||.. .....++..+|.. ..+...|++||+-..+-..+. ..+..++.. ++ +.-.+.++ ++
T Consensus 301 WPnl~~i~~~~~G~~~---~Y~~~l~~~~g~~-~~~~~~Y~ASEg~~gi~~~~~-~~p~~~~~~l~~~~~ffEFiP~~~~ 375 (597)
T PLN02249 301 WPNTKYLDVIVTGAMA---QYIPMLEYYSGGL-PMASTIYASSESYFGINLNPM-CKPSEVSYTIMPNMAYFEFLPHNHD 375 (597)
T ss_pred CCCCCeEEEEecCChH---HHHHHHHHHcCCC-ccccccccccceEEEeecCCC-CCCCCcceEecCCcEEEEeeecccC
Confidence 456 5555555533 6667777777643 256799999996433322211 111212221 12 22334442 21
Q ss_pred CC---------------CCCcceEEEEcCeeeecccccCCCcCcccCCcEEEcCee----EEEEEecCccccccccCCCc
Q psy9665 142 HT---------------MGSQDSFVISGDEIQFAPYCRKMSLGAYLCHWLKLKGKQ----TVLVLGFGSQSCEENLGADN 202 (207)
Q Consensus 142 ~~---------------~g~~Gel~i~g~~~~~~gy~~~~~~~~~~~d~~~~~~~~----~~~i~grg~~~~~~~~~~~~ 202 (207)
+. .|+.=||+|+...- . | .+..||.+++.+-- .+.++||.+.+. ++-||+
T Consensus 376 ~~~~~~~~~~v~l~eVe~G~~Y~lVvTT~~G-L---y-----RY~iGDvVrvtgf~~~~P~i~F~gR~~~~l--s~~GEK 444 (597)
T PLN02249 376 GDGALDETSLVELADVEVGKEYELVITTYAG-L---Y-----RYRVGDILRVTGFHNSAPQFKFIRRKNVLL--SIESDK 444 (597)
T ss_pred CcccCCCCcEecHHHcCCCCeEEEEEEcccc-e---e-----EeecCCEEEEeeccCCCcEEEEEccCCcce--eccccc
Confidence 11 13333666654332 1 1 12467777777733 567777766655 556665
Q ss_pred cc
Q psy9665 203 IS 204 (207)
Q Consensus 203 ~s 204 (207)
.+
T Consensus 445 l~ 446 (597)
T PLN02249 445 TD 446 (597)
T ss_pred CC
Confidence 54
No 144
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=61.57 E-value=7.9 Score=21.59 Aligned_cols=25 Identities=8% Similarity=0.130 Sum_probs=21.7
Q ss_pred eEEEEccCCCCHHHHHHHHHHhCCC
Q psy9665 73 TNIRCGAAPVGKSTLDQVGERLGLS 97 (207)
Q Consensus 73 r~~~~~G~~~~~~~~~~~~~~~~~~ 97 (207)
+.+.++|.|++.+....++..|+..
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~ 46 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKR 46 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhh
Confidence 4578899999999999999988854
No 145
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=61.25 E-value=48 Score=22.42 Aligned_cols=85 Identities=8% Similarity=0.031 Sum_probs=47.9
Q ss_pred chHHHHHHHHHH-HHhCCeEEEeCC-CCHHHHHHHHHhcCceEeeccH---HHH---HHHHhCCCCCCCCCCceeEEEEc
Q psy9665 7 FHGYGLLLMLQA-ICMNNKLVVLPH-FDGHLFLSSIEKYRVTLLPAVP---PLV---VFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 7 ~h~~g~~~~~~~-l~~G~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P---~~~---~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
.|..|..++... -..|-.++.... ..++.+.+.+.+.++.++..+- ... +.+++... ....++++ ++.|
T Consensus 11 ~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~--~~~~~~i~-i~~G 87 (122)
T cd02071 11 GHDRGAKVIARALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLR--ELGAGDIL-VVGG 87 (122)
T ss_pred hhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHH--hcCCCCCE-EEEE
Confidence 377777654444 344666666664 5788999999999998876542 222 22222211 11223444 5566
Q ss_pred cCCCCHHHHHHHHHHhCC
Q psy9665 79 AAPVGKSTLDQVGERLGL 96 (207)
Q Consensus 79 G~~~~~~~~~~~~~~~~~ 96 (207)
|. .+++..+++.+. |.
T Consensus 88 G~-~~~~~~~~~~~~-G~ 103 (122)
T cd02071 88 GI-IPPEDYELLKEM-GV 103 (122)
T ss_pred CC-CCHHHHHHHHHC-CC
Confidence 64 445656666643 64
No 146
>PRK09188 serine/threonine protein kinase; Provisional
Probab=60.01 E-value=9.2 Score=31.60 Aligned_cols=21 Identities=0% Similarity=-0.420 Sum_probs=17.6
Q ss_pred ccCCcEEE-cCeeEEEEEecCc
Q psy9665 171 YLCHWLKL-KGKQTVLVLGFGS 191 (207)
Q Consensus 171 ~~~d~~~~-~~~~~~~i~grg~ 191 (207)
.|||.++. +++|.+++.||.+
T Consensus 212 ~TGDlg~~~d~dG~l~~~gR~~ 233 (365)
T PRK09188 212 ATGKKVYNFITRGLFSWSDGEG 233 (365)
T ss_pred eCCCEEEEEcCCCeEEEEecCc
Confidence 38888887 6899999999975
No 147
>KOG1176|consensus
Probab=59.29 E-value=3.4 Score=35.95 Aligned_cols=40 Identities=18% Similarity=0.175 Sum_probs=34.9
Q ss_pred ccccCCCcCccc-CCcEEEcCeeEEEEEecCccccccccCC
Q psy9665 161 PYCRKMSLGAYL-CHWLKLKGKQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 161 gy~~~~~~~~~~-~d~~~~~~~~~~~i~grg~~~~~~~~~~ 200 (207)
||+++.|.+++. +|++++.+|.+..|.-.|.++.|.+++.
T Consensus 408 GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~ 448 (537)
T KOG1176|consen 408 GWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEA 448 (537)
T ss_pred CccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHH
Confidence 899999998875 5599999999999999999999987753
No 148
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=59.12 E-value=56 Score=22.81 Aligned_cols=79 Identities=15% Similarity=0.103 Sum_probs=45.9
Q ss_pred chHHHHHHHHHH-HHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH----HH--HHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 7 FHGYGLLLMLQA-ICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP----PL--VVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 7 ~h~~g~~~~~~~-l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P----~~--~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
.|.-|...+... -.+|-.++.+. ..+|+.+.+...++++..+..+- ++ ++.+.+..+ ...+...+ +++|
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~--~~gl~~~~-vivG 89 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCD--EAGLEGIL-LYVG 89 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHH--HCCCCCCE-EEec
Confidence 377776543333 34577787777 46899999999999998754322 11 233332221 22233333 7788
Q ss_pred cCC-CCHHHHH
Q psy9665 79 AAP-VGKSTLD 88 (207)
Q Consensus 79 G~~-~~~~~~~ 88 (207)
|.+ ++++-.+
T Consensus 90 G~~vi~~~d~~ 100 (134)
T TIGR01501 90 GNLVVGKQDFP 100 (134)
T ss_pred CCcCcChhhhH
Confidence 875 4554433
No 149
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=56.36 E-value=5 Score=34.49 Aligned_cols=38 Identities=16% Similarity=0.149 Sum_probs=18.2
Q ss_pred ccccCCCcCcccCCcEEEcCeeEEEEEecCcccccccc
Q psy9665 161 PYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENL 198 (207)
Q Consensus 161 gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~ 198 (207)
+|++..|..+..+|.+++.||.+..|.-+|.++.+.++
T Consensus 396 ~~~~TGDl~~~~~G~l~~~GR~dd~i~~~G~~v~p~eI 433 (525)
T PRK05851 396 DWFPTGDLGYLVDGGLVVCGRAKELITVAGRNIFPTEI 433 (525)
T ss_pred CceeccceEEEECCEEEEEeecCCEEEECCEEeCHHHH
Confidence 34444444444444555555444444445555544443
No 150
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=54.48 E-value=77 Score=22.63 Aligned_cols=72 Identities=18% Similarity=0.125 Sum_probs=49.1
Q ss_pred HhCCeEEEeCCCCHHHH---HHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCCCCHHHHHHHHHHhCC
Q psy9665 20 CMNNKLVVLPHFDGHLF---LSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAPVGKSTLDQVGERLGL 96 (207)
Q Consensus 20 ~~G~~~v~~~~~~~~~~---~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~~~~~~~~~~~~~~~~ 96 (207)
..|+++++..+|||.-+ -.++++++...+.+.+.-+.............+. +.. - .|..+++.+.+++. +.
T Consensus 64 ~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~Wrm~~~dY~~~~~~~~~~~~~l~-l~~---v-~p~~~~L~~~m~~~-~~ 137 (152)
T PF09664_consen 64 AAGARLYYSGDFDPEGLRIANRLIQRYGARPWRMDAEDYLAALSAEPLSGRRLK-LPN---V-APWLPELAEAMRER-GR 137 (152)
T ss_pred hCCCEEEEecCCCHHHHHHHHHHHHHhCCccccCCHHHHHHhccccCCCCCcCC-ccc---C-ChhcHHHHHHHHHh-Cc
Confidence 45888888889998654 3456778888888888888666655443333333 332 2 68899999988876 54
Q ss_pred C
Q psy9665 97 S 97 (207)
Q Consensus 97 ~ 97 (207)
.
T Consensus 138 a 138 (152)
T PF09664_consen 138 A 138 (152)
T ss_pred e
Confidence 3
No 151
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=54.38 E-value=71 Score=29.26 Aligned_cols=62 Identities=15% Similarity=0.109 Sum_probs=47.7
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
..++++..|++.+.+. .+.++.+..++++-++.+++..+..+..+.... ..++.++.++.-+
T Consensus 146 ~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 146 ADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 5778899999988876 689999999999999999998887777776542 1245666666543
No 152
>PRK05850 acyl-CoA synthetase; Validated
Probab=54.32 E-value=6.9 Score=34.03 Aligned_cols=41 Identities=22% Similarity=0.259 Sum_probs=31.4
Q ss_pred cccccCCCcCcccCCcEEEcCeeEEEEEecCccccccccCC
Q psy9665 160 APYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 160 ~gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~ 200 (207)
.+|++..|..+..++++++.||.+..|.-+|.++.+++++.
T Consensus 436 ~~w~~TGDl~~~~~G~l~~~GR~~d~i~~~G~~i~p~eIE~ 476 (578)
T PRK05850 436 GPWLRTGDLGFISEGELFIVGRIKDLLIVDGRNHYPDDIEA 476 (578)
T ss_pred CCeeeccceeeEECCEEEEEcccccEEEECCeecCHHHHHH
Confidence 35777888777777788888877777777888888877653
No 153
>KOG1794|consensus
Probab=53.92 E-value=45 Score=26.77 Aligned_cols=72 Identities=8% Similarity=-0.006 Sum_probs=43.1
Q ss_pred CCceeEEEEccC--CCCHHHHHHHHHHhCCCcCcceeccccccccceeeccCCCCCCCccccccCCceEEEEeCCCC
Q psy9665 69 LSSLTNIRCGAA--PVGKSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDLDVPSSSVGKVMPSMKMKVLVKSHT 143 (207)
Q Consensus 69 l~~lr~~~~~G~--~~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~ 143 (207)
+++|-.-++|.+ .-..++.++||++||.. .-+.|=+|++-+......+....+.+-..=.+...+++++||.
T Consensus 68 lr~lgL~lSg~d~e~~~~~lv~~~R~~fps~---ae~~~v~sDa~~sl~a~t~g~~~GiVLiaGTgs~crl~~~DGs 141 (336)
T KOG1794|consen 68 LRSLGLGLSGTDQEDKNRKLVTEFRDKFPSV---AENFYVTSDADGSLAAATPGGEGGIVLIAGTGSNCRLVNPDGS 141 (336)
T ss_pred cceeeeecccCCchhHHHHHHHHHHHhccch---hheeeeehhHHHHHhhcCCCCCCcEEEEecCCceeEEECCCCC
Confidence 555555555653 33567889999999975 5668888887544433322112233322234556777777776
No 154
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=52.29 E-value=7.5 Score=34.17 Aligned_cols=40 Identities=25% Similarity=0.352 Sum_probs=33.4
Q ss_pred ccccCCCcCcccCCcEEEcCeeEEEEEecCccccccccCC
Q psy9665 161 PYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 161 gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~~ 200 (207)
+|++..|..+..++++++.||.+..|.-+|.++.+.+++.
T Consensus 476 ~w~~TGDlg~~~dG~l~i~GR~~d~I~~~G~~I~p~eIE~ 515 (612)
T PRK12476 476 TWLRTGDLGVYLDGELYITGRIADLIVIDGRNHYPQDIEA 515 (612)
T ss_pred CeeeccccceeECCEEEEEeccCcEEEECCcccCHHHHHH
Confidence 4788888887678899999988888888999998887753
No 155
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=52.24 E-value=7.6 Score=34.41 Aligned_cols=42 Identities=21% Similarity=0.298 Sum_probs=31.4
Q ss_pred ecccccCCCcCccc-CCcEEEcC-eeEEEEEecCccccccccCC
Q psy9665 159 FAPYCRKMSLGAYL-CHWLKLKG-KQTVLVLGFGSQSCEENLGA 200 (207)
Q Consensus 159 ~~gy~~~~~~~~~~-~d~~~~~~-~~~~~i~grg~~~~~~~~~~ 200 (207)
-+||+++.|.+..+ +|++++.| .++++++..|+++.|+.++.
T Consensus 447 ~DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~ 490 (613)
T COG1022 447 EDGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIES 490 (613)
T ss_pred ccCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHH
Confidence 37888888887764 46777776 56677777899999887764
No 156
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=52.22 E-value=67 Score=27.08 Aligned_cols=59 Identities=7% Similarity=-0.016 Sum_probs=35.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC--ce---EeeccHHHHHHHHhC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR--VT---LLPAVPPLVVFLAKS 61 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~--~t---~~~~~P~~~~~l~~~ 61 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++.+.. .. ++.+-......|+.+
T Consensus 103 I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~~~~~~l~~~ 172 (429)
T cd07100 103 IMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIAD 172 (429)
T ss_pred EcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCchhHHHHhcC
Confidence 45777655443 37788999999999773 2 4456677777642 22 333333344555554
No 157
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=52.01 E-value=6.6 Score=16.50 Aligned_cols=8 Identities=50% Similarity=0.962 Sum_probs=5.8
Q ss_pred cccccccc
Q psy9665 104 GYGMTELT 111 (207)
Q Consensus 104 ~YG~tE~g 111 (207)
+||+|++.
T Consensus 1 GYGSTqTA 8 (16)
T PF00818_consen 1 GYGSTQTA 8 (16)
T ss_pred CCCccccc
Confidence 58888764
No 158
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=51.96 E-value=5.9 Score=35.24 Aligned_cols=35 Identities=20% Similarity=0.232 Sum_probs=15.2
Q ss_pred HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEee
Q psy9665 15 MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLP 49 (207)
Q Consensus 15 ~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 49 (207)
+++++..|+..+.+. .+.++.+...+++.++++++
T Consensus 134 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li 169 (647)
T PTZ00237 134 MLSCARIGATHCVLFDGYSVKSLIDRIETITPKLII 169 (647)
T ss_pred HHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEE
Confidence 444444444444333 34444444444444444433
No 159
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=51.83 E-value=6.5 Score=33.31 Aligned_cols=36 Identities=17% Similarity=0.050 Sum_probs=15.8
Q ss_pred cccCCCcCcccCCcEEEcCeeEEEEEecCccccccc
Q psy9665 162 YCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEEN 197 (207)
Q Consensus 162 y~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~ 197 (207)
||...|..+..+|++++.||.+..|.-+|.++.+++
T Consensus 375 ~~~TGDlg~~~~~~l~i~GR~~d~i~~~G~~v~~~~ 410 (502)
T TIGR01734 375 AYRTGDAGTITDGQLFYQGRLDFQIKLHGYRIELED 410 (502)
T ss_pred EEECCCEEEEECCEEEEeccccCeEEECcEEeCHHH
Confidence 344444444433344444444444444444444443
No 160
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=51.12 E-value=7.2 Score=32.75 Aligned_cols=36 Identities=8% Similarity=0.119 Sum_probs=20.2
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEee
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLP 49 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 49 (207)
.+++++..|+..+..+ .+.++.+-..+++.++..+.
T Consensus 69 ~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i 105 (458)
T PRK09029 69 AYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFAL 105 (458)
T ss_pred HHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEE
Confidence 3555566666666554 34555555556665555544
No 161
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=49.11 E-value=7 Score=31.64 Aligned_cols=40 Identities=18% Similarity=0.099 Sum_probs=28.3
Q ss_pred cccccCCCcCcccCCcEEEcCeeEEEEEecCccccccccC
Q psy9665 160 APYCRKMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLG 199 (207)
Q Consensus 160 ~gy~~~~~~~~~~~d~~~~~~~~~~~i~grg~~~~~~~~~ 199 (207)
.|||+..|..+..++.+++.||.+..|.-+|.++.+.+++
T Consensus 233 ~g~~~TGDl~~~~~g~l~i~GR~~d~i~~~G~~v~p~eIE 272 (358)
T PRK07824 233 PGWFRTDDLGALDDGVLTVLGRADDAISTGGLTVLPQVVE 272 (358)
T ss_pred CCceecccEEEEeCCEEEEEeccCCeEEECCEEECHHHHH
Confidence 3466666766656667888887777777788888776654
No 162
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=48.14 E-value=8 Score=34.40 Aligned_cols=40 Identities=8% Similarity=-0.045 Sum_probs=25.8
Q ss_pred cccccCCCcCcc-cCCcEEEcCeeEEEEEecCccccccccC
Q psy9665 160 APYCRKMSLGAY-LCHWLKLKGKQTVLVLGFGSQSCEENLG 199 (207)
Q Consensus 160 ~gy~~~~~~~~~-~~d~~~~~~~~~~~i~grg~~~~~~~~~ 199 (207)
.|+|...|..+. .++++++.||.+..|+-+|.++.+.+++
T Consensus 498 ~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE 538 (652)
T TIGR01217 498 PGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIY 538 (652)
T ss_pred CCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHH
Confidence 455566666655 3457777777777777777776665543
No 163
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=47.91 E-value=7.6 Score=34.63 Aligned_cols=40 Identities=15% Similarity=0.210 Sum_probs=25.5
Q ss_pred cccccCCCcCccc-CCcEEEcCeeEEEEE-ecCccccccccC
Q psy9665 160 APYCRKMSLGAYL-CHWLKLKGKQTVLVL-GFGSQSCEENLG 199 (207)
Q Consensus 160 ~gy~~~~~~~~~~-~d~~~~~~~~~~~i~-grg~~~~~~~~~ 199 (207)
.||+...|..+.+ ++++++.||.+..|. ..|.++.+++++
T Consensus 492 dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE 533 (660)
T PLN02861 492 DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLE 533 (660)
T ss_pred ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHH
Confidence 4666777766653 457777776665554 457777776654
No 164
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=47.69 E-value=1e+02 Score=27.47 Aligned_cols=60 Identities=12% Similarity=0.136 Sum_probs=36.1
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHHhc--CceE---eeccHHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIEKY--RVTL---LPAVPPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~~--~~t~---~~~~P~~~~~l~~~~ 62 (207)
..|+++-..+. -+..+|.+|.++++-|. .. ...+.+++++. ...+ +.+.......|+.++
T Consensus 256 I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~ 326 (604)
T PLN02419 256 ICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDE 326 (604)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCC
Confidence 45666655554 36678999999999773 33 44566777765 3233 333334555566553
No 165
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=47.50 E-value=8.3 Score=32.56 Aligned_cols=37 Identities=8% Similarity=0.131 Sum_probs=26.2
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeec
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPA 50 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 50 (207)
.+++++..|+.++..+ .+.+..+...+++.++.++..
T Consensus 61 ~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 61 AFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred HHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 4667777788777766 456777777777777776654
No 166
>PLN02614 long-chain acyl-CoA synthetase
Probab=45.71 E-value=7.6 Score=34.70 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=24.4
Q ss_pred cccccCCCcCccc-CCcEEEcCeeEEEEE-ecCccccccccC
Q psy9665 160 APYCRKMSLGAYL-CHWLKLKGKQTVLVL-GFGSQSCEENLG 199 (207)
Q Consensus 160 ~gy~~~~~~~~~~-~d~~~~~~~~~~~i~-grg~~~~~~~~~ 199 (207)
.||+.+.|..+.+ +|++++.||.+..|. ..|.++.+++++
T Consensus 495 dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE 536 (666)
T PLN02614 495 DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIE 536 (666)
T ss_pred cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHH
Confidence 4566666666653 456776666555554 457777666554
No 167
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=45.14 E-value=1.1e+02 Score=26.54 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=36.4
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC-----ceEeecc-HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR-----VTLLPAV-PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~-----~t~~~~~-P~~~~~l~~~~ 62 (207)
..|+++-..+. -+..+|.+|.++++-|+ . ....+.+++++.. ++++.+. +..-..|+.++
T Consensus 165 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p 236 (501)
T PLN02766 165 IIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHM 236 (501)
T ss_pred ECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCC
Confidence 45666666554 37788999999999773 3 3345667777652 3334332 23455566554
No 168
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=45.13 E-value=1e+02 Score=26.16 Aligned_cols=60 Identities=15% Similarity=0.200 Sum_probs=36.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcCc-----eEeecc--HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYRV-----TLLPAV--PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~~-----t~~~~~--P~~~~~l~~~~ 62 (207)
..|+++-.... .+..+|.+|.++++-++ . ....+.+++++... +++.+. ......|+.++
T Consensus 124 I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~ 196 (448)
T TIGR01780 124 ITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSP 196 (448)
T ss_pred EcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCC
Confidence 45666655544 37788999999999873 2 34556677776532 333332 34456666554
No 169
>PLN02654 acetate-CoA ligase
Probab=44.80 E-value=9.4 Score=34.08 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=25.1
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+.+. .+.++.+...+++.++.++...
T Consensus 161 a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~ 199 (666)
T PLN02654 161 AMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITC 199 (666)
T ss_pred HHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEc
Confidence 4666677777766664 5667777777777776666543
No 170
>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [].
Probab=44.65 E-value=35 Score=22.26 Aligned_cols=19 Identities=16% Similarity=0.298 Sum_probs=15.9
Q ss_pred ccccccCCceEEEEe-CCCC
Q psy9665 125 SVGKVMPSMKMKVLV-KSHT 143 (207)
Q Consensus 125 ~~G~~~~~~~~~i~d-~~~~ 143 (207)
.-|+|++++++++++ .+++
T Consensus 23 ~tg~Pv~ga~V~l~~~~~~~ 42 (97)
T PF11974_consen 23 STGKPVAGAEVELYDSRNGQ 42 (97)
T ss_pred CCCCccCCCEEEEEECCCCc
Confidence 458999999999999 7654
No 171
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=43.56 E-value=1.1e+02 Score=26.66 Aligned_cols=60 Identities=17% Similarity=0.319 Sum_probs=36.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc--CceEeeccH----HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY--RVTLLPAVP----PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~ 62 (207)
..|.++-..+. .+..+|.+|.++++-++ ..+..+.+++++. ...++..++ .....|..++
T Consensus 173 I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~ 244 (512)
T cd07124 173 ISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHP 244 (512)
T ss_pred ECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCC
Confidence 45666655443 47788999999999873 2456667777764 223333332 3445566554
No 172
>PLN02467 betaine aldehyde dehydrogenase
Probab=42.99 E-value=1.5e+02 Score=25.73 Aligned_cols=60 Identities=12% Similarity=0.115 Sum_probs=36.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC-----ceEeecc-HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR-----VTLLPAV-PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~-----~t~~~~~-P~~~~~l~~~~ 62 (207)
..|+++-..+. -+..+|.+|.++++-++ .....+.+++++.. ++++.+. ....+.|+.++
T Consensus 158 I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~ 229 (503)
T PLN02467 158 ITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHP 229 (503)
T ss_pred ECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCC
Confidence 45666665554 36688999999999773 34566677777652 3333332 23455666554
No 173
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=42.97 E-value=1.3e+02 Score=25.94 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=27.9
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 139 I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~a 185 (484)
T TIGR03240 139 FGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKA 185 (484)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHh
Confidence 45666655443 37788999999999873 2 455667777765
No 174
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=42.95 E-value=1.2e+02 Score=25.41 Aligned_cols=41 Identities=22% Similarity=0.466 Sum_probs=28.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. -+..+|.+|.++++-++ . ....+.+++++.
T Consensus 78 i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 124 (409)
T PRK10090 78 ILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEI 124 (409)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHc
Confidence 45777755544 37788999999999773 2 455667777765
No 175
>PLN02278 succinic semialdehyde dehydrogenase
Probab=42.72 E-value=88 Score=27.06 Aligned_cols=60 Identities=17% Similarity=0.145 Sum_probs=35.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc--CceEeeccH----HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY--RVTLLPAVP----PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-+. . ....+.+++.+. ...++..++ ...+.|+.++
T Consensus 167 I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~ 238 (498)
T PLN02278 167 ITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASP 238 (498)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCC
Confidence 45777665554 37788999999999773 3 334556666663 333333322 3445566553
No 176
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=42.08 E-value=1.3e+02 Score=25.62 Aligned_cols=69 Identities=17% Similarity=0.180 Sum_probs=41.2
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC--ceEeecc----HHHHHHHHhCCCCCCCCCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR--VTLLPAV----PPLVVFLAKSPLVDQYDLS 70 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~--~t~~~~~----P~~~~~l~~~~~~~~~~l~ 70 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++.. ..++..+ ......|+.++
T Consensus 124 I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~-------- 195 (454)
T cd07109 124 IIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHP-------- 195 (454)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCC--------
Confidence 45666665444 36788999999999773 2 4556777777743 2333333 24455666553
Q ss_pred ceeEEEEcc
Q psy9665 71 SLTNIRCGA 79 (207)
Q Consensus 71 ~lr~~~~~G 79 (207)
.++.+.+.|
T Consensus 196 ~v~~v~ftG 204 (454)
T cd07109 196 GVDHISFTG 204 (454)
T ss_pred CCCEEEEEC
Confidence 345555555
No 177
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=41.81 E-value=1.2e+02 Score=25.96 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=36.4
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC-----ceEeeccHHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR-----VTLLPAVPPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~-----~t~~~~~P~~~~~l~~~~ 62 (207)
..|.++-..+. .+..+|.+|.++++-++ . .+..+.+++++.. ++++.+.......|++++
T Consensus 143 I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~ 213 (477)
T TIGR01722 143 ITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHP 213 (477)
T ss_pred EccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCC
Confidence 45666554333 35678999999999773 2 4556677777753 233444345566666654
No 178
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=41.78 E-value=1.3e+02 Score=25.69 Aligned_cols=60 Identities=17% Similarity=0.188 Sum_probs=36.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC-----ceEeeccHHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR-----VTLLPAVPPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~-----~t~~~~~P~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-++ ..+..+.+++++.. ++++.+.+...+.|++++
T Consensus 143 I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~ 213 (478)
T cd07085 143 ITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHP 213 (478)
T ss_pred ECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCC
Confidence 34655554433 36788999999999773 24566777777742 223333334555666654
No 179
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=41.69 E-value=1.2e+02 Score=25.91 Aligned_cols=60 Identities=17% Similarity=0.170 Sum_probs=35.8
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc--CceEeeccH---HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY--RVTLLPAVP---PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~--~~t~~~~~P---~~~~~l~~~~ 62 (207)
..|+++-..+. -+..+|.+|.++++-|+ . .+..+.+++++. ...++..++ ..-..|++++
T Consensus 149 I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~ 219 (477)
T cd07113 149 IVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHP 219 (477)
T ss_pred EcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCC
Confidence 34666655544 36788999999999773 2 345567777765 323333332 2445566554
No 180
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=41.31 E-value=1e+02 Score=25.95 Aligned_cols=60 Identities=17% Similarity=0.130 Sum_probs=36.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC--ceEeeccH-------HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR--VTLLPAVP-------PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~--~t~~~~~P-------~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-++ ..+..+.+++++.. ..++..++ .....|++++
T Consensus 105 I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~ 179 (432)
T cd07105 105 IAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHP 179 (432)
T ss_pred ECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCC
Confidence 45666655543 37788999999999873 24556677777652 23333332 2456666654
No 181
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=41.20 E-value=96 Score=26.54 Aligned_cols=41 Identities=12% Similarity=0.187 Sum_probs=27.4
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ .....+.+++++.
T Consensus 142 I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a 188 (478)
T cd07131 142 ITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEA 188 (478)
T ss_pred ECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhc
Confidence 45666655433 36788999999999773 2455666777764
No 182
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=41.11 E-value=1.3e+02 Score=25.57 Aligned_cols=60 Identities=12% Similarity=0.130 Sum_probs=36.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC-----ceEeeccH-HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR-----VTLLPAVP-PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~-----~t~~~~~P-~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.. ++++.+.. .....|++++
T Consensus 127 I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~ 198 (456)
T cd07110 127 ITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHP 198 (456)
T ss_pred ECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCC
Confidence 45666655444 36788999999999873 2 3456677777653 22333322 2445566553
No 183
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=40.91 E-value=12 Score=33.82 Aligned_cols=40 Identities=8% Similarity=0.100 Sum_probs=24.0
Q ss_pred cccccCCCcCcc-cCCcEEEcCeeEEEEEecCccccccccC
Q psy9665 160 APYCRKMSLGAY-LCHWLKLKGKQTVLVLGFGSQSCEENLG 199 (207)
Q Consensus 160 ~gy~~~~~~~~~-~~d~~~~~~~~~~~i~grg~~~~~~~~~ 199 (207)
.||++..|..+. .++++++.||.+..|.-+|.++.+.+++
T Consensus 590 ~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE 630 (718)
T PRK08043 590 RGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVE 630 (718)
T ss_pred CCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHH
Confidence 355666666554 3446666666666666667666666554
No 184
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=40.84 E-value=1.5e+02 Score=25.34 Aligned_cols=60 Identities=20% Similarity=0.303 Sum_probs=35.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc--CceEeecc---HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY--RVTLLPAV---PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~--~~t~~~~~---P~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-+. ..+..+.+++++. ...++..+ +..-..|+.++
T Consensus 144 I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~ 214 (471)
T cd07139 144 IVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHP 214 (471)
T ss_pred EcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCC
Confidence 35666655554 36788999999999773 2455666777664 22333333 34445555543
No 185
>PLN02736 long-chain acyl-CoA synthetase
Probab=40.76 E-value=1.4e+02 Score=26.52 Aligned_cols=61 Identities=13% Similarity=0.017 Sum_probs=45.3
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCG 78 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~ 78 (207)
..++++..|+.++.+. .+.++.+..++++.++.+++..+..+..+..... .++.++.++.-
T Consensus 119 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 119 VDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred HHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 4778889999998775 6789999999999999999998877766644321 23445555543
No 186
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=40.26 E-value=1.5e+02 Score=25.49 Aligned_cols=60 Identities=8% Similarity=0.102 Sum_probs=35.9
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC--c---eEeeccHHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR--V---TLLPAVPPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~--~---t~~~~~P~~~~~l~~~~ 62 (207)
..|+++-..+. -+..+|.+|.++++-++ .....+.+++++.. . +++.+....-..|+.++
T Consensus 149 I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~ 219 (488)
T PRK13252 149 IGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHP 219 (488)
T ss_pred ECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCC
Confidence 34666655544 36788999999999763 24566777777642 2 33333233455565554
No 187
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=39.86 E-value=14 Score=32.15 Aligned_cols=38 Identities=16% Similarity=0.142 Sum_probs=23.1
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+.++ .+.++.+...+++.++..+...
T Consensus 73 ~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~ 111 (563)
T PLN02860 73 WLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTD 111 (563)
T ss_pred HHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEe
Confidence 3556666666666655 4566666666666666665543
No 188
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=39.84 E-value=12 Score=33.31 Aligned_cols=38 Identities=8% Similarity=-0.069 Sum_probs=18.4
Q ss_pred ccccCCCcCcc-cCCcEEEcCeeEEEEEecCcccccccc
Q psy9665 161 PYCRKMSLGAY-LCHWLKLKGKQTVLVLGFGSQSCEENL 198 (207)
Q Consensus 161 gy~~~~~~~~~-~~d~~~~~~~~~~~i~grg~~~~~~~~ 198 (207)
|+|...|..+. .++++++.||.+..|.-+|.++.+.++
T Consensus 498 g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EI 536 (655)
T PRK03584 498 GVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEI 536 (655)
T ss_pred CEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHH
Confidence 34444444443 234555555555555555555554443
No 189
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=39.51 E-value=1.4e+02 Score=25.44 Aligned_cols=41 Identities=7% Similarity=0.037 Sum_probs=28.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~ 43 (207)
..|+++-..+. -+..+|..|.++++-++ ..+..+.+++++.
T Consensus 130 I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~a 176 (457)
T PRK09406 130 VMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRA 176 (457)
T ss_pred ECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHh
Confidence 45666655544 36788999999999773 2445667777775
No 190
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=39.10 E-value=1.7e+02 Score=26.44 Aligned_cols=62 Identities=11% Similarity=0.063 Sum_probs=46.1
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
..++++..|+..+... .+.++.+...+++.++.+++.....+..+.+... .+++++.++.-+
T Consensus 147 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 147 ALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 4778888999998766 6789999999999999999988877777654321 234565555543
No 191
>PRK09192 acyl-CoA synthetase; Validated
Probab=39.03 E-value=16 Score=31.79 Aligned_cols=40 Identities=8% Similarity=-0.028 Sum_probs=20.7
Q ss_pred HHHHHHHhCCeEEEeC-CCC-------HHHHHHHHHhcCceEeeccHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFD-------GHLFLSSIEKYRVTLLPAVPP 53 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~-------~~~~~~~i~~~~~t~~~~~P~ 53 (207)
.+++++..|+..+..+ ++. .+.+...+++.++..+.....
T Consensus 90 ~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~ 137 (579)
T PRK09192 90 AFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDE 137 (579)
T ss_pred HHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChH
Confidence 3555566666665553 111 345555566666665554443
No 192
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=38.91 E-value=1.1e+02 Score=25.92 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=27.3
Q ss_pred cccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 4 VPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 4 ~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
.|.++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 131 ~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~a 176 (452)
T cd07147 131 TPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAET 176 (452)
T ss_pred cCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHc
Confidence 4666555443 36788999999999773 2 455667777775
No 193
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=38.70 E-value=1.1e+02 Score=26.19 Aligned_cols=60 Identities=20% Similarity=0.244 Sum_probs=35.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc--CceEeeccH----HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY--RVTLLPAVP----PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-++ .....+.+++.+. ...++..++ .....|++++
T Consensus 141 I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~ 212 (482)
T cd07119 141 ITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESP 212 (482)
T ss_pred EcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCC
Confidence 34555544333 36788999999999773 2455667777764 333333332 2445565553
No 194
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=38.30 E-value=1.4e+02 Score=25.89 Aligned_cols=42 Identities=10% Similarity=0.277 Sum_probs=29.3
Q ss_pred cccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 2 ALVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 2 ~~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
...|.++-..+. .+..+|.+|.++++-|+ . ....+.+++++.
T Consensus 160 ~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea 207 (500)
T cd07083 160 VISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEA 207 (500)
T ss_pred EEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHc
Confidence 346777765554 37788999999999773 2 445667777765
No 195
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=38.27 E-value=1.4e+02 Score=25.68 Aligned_cols=41 Identities=24% Similarity=0.404 Sum_probs=28.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 154 I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~a 200 (480)
T cd07111 154 IVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEA 200 (480)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 45666665544 37788999999999873 2 345566677765
No 196
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=38.07 E-value=1.7e+02 Score=24.78 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=27.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . .+..+.+++++.
T Consensus 104 I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~a 150 (431)
T cd07095 104 FGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA 150 (431)
T ss_pred ECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHh
Confidence 45666655443 47778999999999773 2 445566667664
No 197
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=37.58 E-value=1.7e+02 Score=24.95 Aligned_cols=60 Identities=12% Similarity=0.205 Sum_probs=35.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC-----ceEeeccH-HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR-----VTLLPAVP-PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~-----~t~~~~~P-~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-++ .....+.+++++.. ++++.+.. .....|..++
T Consensus 137 I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~ 208 (466)
T cd07138 137 ITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHP 208 (466)
T ss_pred ECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCC
Confidence 45665554333 37788999999999773 24566677777653 23333322 3455566554
No 198
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=36.59 E-value=1.3e+02 Score=25.82 Aligned_cols=41 Identities=15% Similarity=0.301 Sum_probs=27.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 142 I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 188 (473)
T cd07097 142 ITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEA 188 (473)
T ss_pred EcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc
Confidence 45666655443 36788999999999773 2 455666777764
No 199
>cd04910 ACT_AK-Ectoine_1 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the first of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase
Probab=36.42 E-value=1e+02 Score=18.87 Aligned_cols=49 Identities=12% Similarity=0.279 Sum_probs=36.9
Q ss_pred HHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCCCCHHHHHHHHHHhCCC
Q psy9665 34 HLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAPVGKSTLDQVGERLGLS 97 (207)
Q Consensus 34 ~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~~~~~~~~~~~~~~~~~ 97 (207)
..+++.+.+++++++.- ..+..++...+.+.........+.+.+++|..
T Consensus 19 ~~i~~~l~~~~v~ii~K---------------~~nANtit~yl~~~~k~~~r~~~~Le~~~p~a 67 (71)
T cd04910 19 LEILELLQRFKVSIIAK---------------DTNANTITHYLAGSLKTIKRLTEDLENRFPNA 67 (71)
T ss_pred HHHHHHHHHcCCeEEEE---------------ecCCCeEEEEEEcCHHHHHHHHHHHHHhCccC
Confidence 46788889999997652 22345787788777777788889998888865
No 200
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=36.15 E-value=16 Score=32.15 Aligned_cols=38 Identities=16% Similarity=0.148 Sum_probs=25.3
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+... .+.++.+...+++.++.++...
T Consensus 129 ~~lA~~~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~ 167 (625)
T TIGR02188 129 AMLACARIGAIHSVVFGGFSAEALADRINDAGAKLVITA 167 (625)
T ss_pred HHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEc
Confidence 4666677777766654 5667777777777777766543
No 201
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=36.05 E-value=1.5e+02 Score=20.57 Aligned_cols=77 Identities=16% Similarity=0.098 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHH-HhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH---H---HHHHHHhCCCCCCCCCCceeEEEEcc
Q psy9665 8 HGYGLLLMLQAI-CMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP---P---LVVFLAKSPLVDQYDLSSLTNIRCGA 79 (207)
Q Consensus 8 h~~g~~~~~~~l-~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P---~---~~~~l~~~~~~~~~~l~~lr~~~~~G 79 (207)
|.-|...+...| .+|-.++-+. ..+++.+.+...++++..+..+- + .++.+.+..+ ...+..++ ++.||
T Consensus 12 HdiGkniv~~~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~--~~gl~~v~-vivGG 88 (128)
T cd02072 12 HAVGNKILDHAFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCD--EAGLKDIL-LYVGG 88 (128)
T ss_pred hHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHH--HCCCCCCe-EEEEC
Confidence 666665433332 4577777777 56899999999999998754321 1 1222322221 22333444 66677
Q ss_pred CC-CCHHHH
Q psy9665 80 AP-VGKSTL 87 (207)
Q Consensus 80 ~~-~~~~~~ 87 (207)
.. ++++-+
T Consensus 89 ~~~i~~~d~ 97 (128)
T cd02072 89 NLVVGKQDF 97 (128)
T ss_pred CCCCChhhh
Confidence 65 465555
No 202
>PLN03051 acyl-activating enzyme; Provisional
Probab=36.03 E-value=16 Score=31.21 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=27.5
Q ss_pred cccCCCcCcc-cCCcEEEcCeeEEEEEecCccccccccC
Q psy9665 162 YCRKMSLGAY-LCHWLKLKGKQTVLVLGFGSQSCEENLG 199 (207)
Q Consensus 162 y~~~~~~~~~-~~d~~~~~~~~~~~i~grg~~~~~~~~~ 199 (207)
+++..|..+. .++++++.||.+..|.-+|.++.+.+++
T Consensus 358 ~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE 396 (499)
T PLN03051 358 LRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIE 396 (499)
T ss_pred eeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHH
Confidence 4566676665 4568888888888888888888777655
No 203
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=35.64 E-value=1.7e+02 Score=25.20 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=34.5
Q ss_pred cccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcCc--e---Eeec-cHHHHHHHHhCC
Q psy9665 4 VPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYRV--T---LLPA-VPPLVVFLAKSP 62 (207)
Q Consensus 4 ~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~~--t---~~~~-~P~~~~~l~~~~ 62 (207)
.|+++-..+. .+..+|.+|.++++-++ . ....+.+++++... . ++.+ .+...+.|..++
T Consensus 143 ~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~ 213 (488)
T TIGR02299 143 TPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHP 213 (488)
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCC
Confidence 4666555443 36788999999999773 2 34556677776532 2 3333 223445565553
No 204
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=35.53 E-value=1.8e+02 Score=24.92 Aligned_cols=60 Identities=23% Similarity=0.323 Sum_probs=36.1
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC--ceEeecc----HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR--VTLLPAV----PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~--~t~~~~~----P~~~~~l~~~~ 62 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++.. ..++..+ ......|+.++
T Consensus 146 I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~ 217 (472)
T TIGR03250 146 ITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITNP 217 (472)
T ss_pred EcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcCC
Confidence 45666666444 37788999999999773 3 3455677777753 2333332 23445566554
No 205
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=35.19 E-value=1.9e+02 Score=24.68 Aligned_cols=41 Identities=20% Similarity=0.328 Sum_probs=28.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ .....+.+++++.
T Consensus 131 I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 177 (455)
T cd07148 131 ISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA 177 (455)
T ss_pred ECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHc
Confidence 35666655443 37788999999999773 2456677777775
No 206
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=35.07 E-value=2.1e+02 Score=24.61 Aligned_cols=59 Identities=19% Similarity=0.142 Sum_probs=35.1
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC--ceEeecc---HHHHHHHHhC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR--VTLLPAV---PPLVVFLAKS 61 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~--~t~~~~~---P~~~~~l~~~ 61 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.. ..++..+ ...-..|+++
T Consensus 141 I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~ 210 (487)
T PRK09457 141 FGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAH 210 (487)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcC
Confidence 45666654433 37788999999999773 2 4456667777753 3333333 3344555554
No 207
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=35.06 E-value=2e+02 Score=24.40 Aligned_cols=41 Identities=24% Similarity=0.322 Sum_probs=27.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 130 I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a 176 (456)
T cd07145 130 ITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEA 176 (456)
T ss_pred ECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence 34666655443 36778999999999773 2 455667777774
No 208
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=34.98 E-value=1.1e+02 Score=29.41 Aligned_cols=61 Identities=13% Similarity=0.220 Sum_probs=37.2
Q ss_pred cccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc--CceEeeccHH----HHHHHHhCC
Q psy9665 2 ALVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY--RVTLLPAVPP----LVVFLAKSP 62 (207)
Q Consensus 2 ~~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~--~~t~~~~~P~----~~~~l~~~~ 62 (207)
+..|+++-..+. .+..++.+|.++++-|. . .+..+.+++++. ...++..+|. .-..|+.++
T Consensus 690 ~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p 762 (1038)
T PRK11904 690 CISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADP 762 (1038)
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCC
Confidence 456777644443 47888999999999773 2 345566667664 3344444442 445565553
No 209
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=34.62 E-value=1.2e+02 Score=25.96 Aligned_cols=41 Identities=17% Similarity=0.283 Sum_probs=26.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 148 I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~a 194 (476)
T cd07091 148 IIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEA 194 (476)
T ss_pred ECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHc
Confidence 34555544443 36678999999999773 2 345667777764
No 210
>PRK07529 AMP-binding domain protein; Validated
Probab=34.54 E-value=18 Score=32.09 Aligned_cols=37 Identities=5% Similarity=0.042 Sum_probs=22.8
Q ss_pred HHHHHHHhCCeEEEe-CCCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVL-PHFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|. ++.. +.+.++.+..++++.++.++...
T Consensus 99 ~~lA~~~~Gi-~~pi~~~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 99 ALWGGEAAGI-ANPINPLLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred HHHHHHHhCE-EEeCCCcCCHHHHHHHHHhcCCcEEEEe
Confidence 4556666663 3323 24577777777777777776653
No 211
>PRK07788 acyl-CoA synthetase; Validated
Probab=34.24 E-value=1.3e+02 Score=25.82 Aligned_cols=45 Identities=16% Similarity=0.174 Sum_probs=37.4
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
.+++++..|+..+..+ .+.++.+...+++.++..+...+.....+
T Consensus 115 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 160 (549)
T PRK07788 115 ALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLL 160 (549)
T ss_pred HHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHH
Confidence 5788899999999987 57889999999999999988776655544
No 212
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=34.10 E-value=2.4e+02 Score=24.50 Aligned_cols=60 Identities=20% Similarity=0.415 Sum_probs=36.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc--CceEeeccH----HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY--RVTLLPAVP----PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~ 62 (207)
..|.++-..+. .+..+|.+|.++++-++ ..+..+.+++++. ...++..++ .....|+.++
T Consensus 178 I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~ 249 (514)
T PRK03137 178 ISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHP 249 (514)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCC
Confidence 45666655443 47788999999999773 2455667777765 233333332 3345555553
No 213
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=33.91 E-value=1.8e+02 Score=24.80 Aligned_cols=41 Identities=15% Similarity=0.139 Sum_probs=27.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++.+.
T Consensus 131 i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~a 177 (462)
T cd07112 131 VVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEA 177 (462)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhc
Confidence 45666555443 36678999999999773 2 345666777664
No 214
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=33.54 E-value=1.7e+02 Score=25.11 Aligned_cols=41 Identities=17% Similarity=0.288 Sum_probs=27.2
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ .....+.+++++.
T Consensus 152 I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~a 198 (481)
T cd07141 152 IIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEA 198 (481)
T ss_pred EccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHc
Confidence 45666655443 36788999999999773 2445566777664
No 215
>PRK11121 nrdG anaerobic ribonucleotide reductase-activating protein; Provisional
Probab=33.41 E-value=50 Score=23.51 Aligned_cols=11 Identities=18% Similarity=0.223 Sum_probs=8.7
Q ss_pred EEEEccCCCCH
Q psy9665 74 NIRCGAAPVGK 84 (207)
Q Consensus 74 ~~~~~G~~~~~ 84 (207)
..++||||+-+
T Consensus 69 vt~sGGEPl~~ 79 (154)
T PRK11121 69 LSLSGGDPLHP 79 (154)
T ss_pred EEEECCCccch
Confidence 47789999964
No 216
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=33.38 E-value=1.1e+02 Score=29.86 Aligned_cols=61 Identities=13% Similarity=0.207 Sum_probs=38.2
Q ss_pred cccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc--CceEeeccH----HHHHHHHhCC
Q psy9665 2 ALVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY--RVTLLPAVP----PLVVFLAKSP 62 (207)
Q Consensus 2 ~~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~ 62 (207)
+..|+++-..+. .+..++.+|.++++-|. . .+..+.+++++. ...++..+| ..-..|+.++
T Consensus 682 ~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p 754 (1208)
T PRK11905 682 CISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADP 754 (1208)
T ss_pred EEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCC
Confidence 456777755444 47788999999999773 2 345566777775 333444443 2556666654
No 217
>PRK09274 peptide synthase; Provisional
Probab=33.18 E-value=21 Score=30.77 Aligned_cols=37 Identities=5% Similarity=-0.018 Sum_probs=23.7
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeec
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPA 50 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 50 (207)
.+++++..|+..+..+ .+.++.+...+++.++..+..
T Consensus 82 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~ 119 (552)
T PRK09274 82 LTFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIG 119 (552)
T ss_pred HHHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEe
Confidence 4666677777766665 455666666667766666554
No 218
>PRK09088 acyl-CoA synthetase; Validated
Probab=33.14 E-value=20 Score=30.31 Aligned_cols=38 Identities=13% Similarity=0.076 Sum_probs=28.9
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+..+ ...++.+...+++.+++.+...
T Consensus 63 ~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~ 101 (488)
T PRK09088 63 LHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLGD 101 (488)
T ss_pred HHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEEc
Confidence 4677788888888776 5677888888888888877553
No 219
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=33.03 E-value=1.9e+02 Score=24.61 Aligned_cols=41 Identities=17% Similarity=0.285 Sum_probs=28.2
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 126 I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~a 172 (454)
T cd07118 126 ITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEA 172 (454)
T ss_pred ECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhc
Confidence 45666666553 37788999999999773 2 455667777775
No 220
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=32.90 E-value=20 Score=31.70 Aligned_cols=38 Identities=16% Similarity=0.120 Sum_probs=29.5
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+.+. .+.++.+...+++.++.++...
T Consensus 139 ~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~ 177 (637)
T PRK00174 139 AMLACARIGAVHSVVFGGFSAEALADRIIDAGAKLVITA 177 (637)
T ss_pred HHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCCcEEEEc
Confidence 5777888888888776 5778888888888888877653
No 221
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=32.54 E-value=2.4e+02 Score=23.91 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=27.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|.++-.... .+..+|.+|.++++-++ . .+..+.+++++.
T Consensus 124 i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~a 170 (455)
T cd07093 124 ITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEA 170 (455)
T ss_pred ECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhc
Confidence 34555544332 46788999999999873 2 445677777765
No 222
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=32.52 E-value=2.1e+02 Score=24.56 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=26.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHh
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEK 42 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~ 42 (207)
..|+++-..+. .+..+|.+|.++++-|+ . ....+.+++++
T Consensus 143 I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~ 188 (480)
T cd07559 143 IIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGD 188 (480)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHH
Confidence 45666665554 36788999999999873 2 34456666665
No 223
>PF04915 DltD_N: DltD N-terminal region; InterPro: IPR006999 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the N-terminal region of DltD.; PDB: 3BMA_C.
Probab=32.48 E-value=30 Score=20.68 Aligned_cols=19 Identities=26% Similarity=0.260 Sum_probs=11.9
Q ss_pred HhCCCcCcceeccccccccce
Q psy9665 93 RLGLSMDSMKQGYGMTELTIL 113 (207)
Q Consensus 93 ~~~~~~~~i~~~YG~tE~g~~ 113 (207)
.+... +.+..||+||-.-.
T Consensus 24 al~~~--~yvPfyGSSEl~r~ 42 (62)
T PF04915_consen 24 ALKDP--KYVPFYGSSELSRF 42 (62)
T ss_dssp HHSSS---EEEEE-SSTTTS-
T ss_pred HhcCC--CeeeecCcHHHhcc
Confidence 33555 69999999997544
No 224
>KOG1175|consensus
Probab=32.42 E-value=16 Score=32.50 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=31.9
Q ss_pred ecccccCCCcCcc-cCCcEEEcCeeEEEEEecCcccccccc
Q psy9665 159 FAPYCRKMSLGAY-LCHWLKLKGKQTVLVLGFGSQSCEENL 198 (207)
Q Consensus 159 ~~gy~~~~~~~~~-~~d~~~~~~~~~~~i~grg~~~~~~~~ 198 (207)
+.|||...|..++ .+|++++.||-|+.||-.|-..-..++
T Consensus 473 ~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEI 513 (626)
T KOG1175|consen 473 FPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEI 513 (626)
T ss_pred CCceEEecCceEEcCCceEEEEecccccccccceeecHHHH
Confidence 5889999988776 566999999999999999866554443
No 225
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=32.16 E-value=1.3e+02 Score=29.78 Aligned_cols=70 Identities=9% Similarity=0.167 Sum_probs=43.6
Q ss_pred cccccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHHhc--CceEeeccH----HHHHHHHhCCCCCCCCC
Q psy9665 2 ALVPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIEKY--RVTLLPAVP----PLVVFLAKSPLVDQYDL 69 (207)
Q Consensus 2 ~~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~~~~~~~l 69 (207)
+..|+++-..+. .+..+|.+|.++++-|. .+ +..+.+++++. ...++..+| .+-..|+.++
T Consensus 774 ~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p------- 846 (1318)
T PRK11809 774 CISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADA------- 846 (1318)
T ss_pred EECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCC-------
Confidence 567877766555 37788999999999773 33 44556667764 334555554 3455566554
Q ss_pred CceeEEEEcc
Q psy9665 70 SSLTNIRCGA 79 (207)
Q Consensus 70 ~~lr~~~~~G 79 (207)
.++.+.+.|
T Consensus 847 -~V~~V~FTG 855 (1318)
T PRK11809 847 -RVRGVMFTG 855 (1318)
T ss_pred -CcCEEEEeC
Confidence 355555555
No 226
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=31.60 E-value=1.9e+02 Score=24.71 Aligned_cols=60 Identities=18% Similarity=0.218 Sum_probs=35.4
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHh---cCceEeecc----HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEK---YRVTLLPAV----PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~---~~~t~~~~~----P~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|..|.++++-++ . ....+.+++++ ....++..+ +.....|+.++
T Consensus 124 I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~ 196 (455)
T cd07120 124 IVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASP 196 (455)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCC
Confidence 45666655444 37778999999999773 3 34556677776 222333322 23455666554
No 227
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=31.40 E-value=22 Score=31.12 Aligned_cols=38 Identities=5% Similarity=-0.105 Sum_probs=17.6
Q ss_pred ccccCCCcCccc-CCcEEEcCeeEEEEEecCcccccccc
Q psy9665 161 PYCRKMSLGAYL-CHWLKLKGKQTVLVLGFGSQSCEENL 198 (207)
Q Consensus 161 gy~~~~~~~~~~-~d~~~~~~~~~~~i~grg~~~~~~~~ 198 (207)
+||++.|..+.. ++.+++.||.+..|.-+|.++.+.++
T Consensus 439 ~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eI 477 (600)
T PRK08279 439 AWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEV 477 (600)
T ss_pred ceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHH
Confidence 344445544432 33555555444444444555544443
No 228
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=31.35 E-value=2.9e+02 Score=23.83 Aligned_cols=61 Identities=13% Similarity=0.181 Sum_probs=37.8
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC-----ceEeecc-HHHHHHHHhCCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR-----VTLLPAV-PPLVVFLAKSPL 63 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~-----~t~~~~~-P~~~~~l~~~~~ 63 (207)
..|+++-..+. -+..+|.+|+++++-|. .++..+.+++.+.. ++++.+. +..-+.|+.++.
T Consensus 140 I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~ 212 (472)
T COG1012 140 ITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPD 212 (472)
T ss_pred ECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCC
Confidence 35666555444 37788999999999772 34556666665552 2444443 226677777753
No 229
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=31.33 E-value=1.7e+02 Score=25.01 Aligned_cols=41 Identities=20% Similarity=0.232 Sum_probs=27.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-.... .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 130 I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~a 176 (459)
T cd07089 130 ITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAET 176 (459)
T ss_pred EcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHc
Confidence 34655544333 47788999999999873 2 345667777764
No 230
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=31.33 E-value=3.2e+02 Score=23.07 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=26.9
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCCC----CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPHF----DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~ 43 (207)
..|.++-.... .+..+|.+|.++++-++. .+..+.+++++.
T Consensus 130 i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~a 176 (453)
T cd07149 130 ITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEA 176 (453)
T ss_pred ECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 34555444332 367889999999997732 455677777774
No 231
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=31.31 E-value=2.2e+02 Score=24.08 Aligned_cols=60 Identities=13% Similarity=0.201 Sum_probs=34.5
Q ss_pred ccccchHHH--HHHHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC--ceEeecc---HHHHHHHHhCC
Q psy9665 3 LVPFFHGYG--LLLMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR--VTLLPAV---PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g--~~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~--~t~~~~~---P~~~~~l~~~~ 62 (207)
..|.++-.. +..+..+|..|.++++-++ . ....+.+++++.. ..++..+ ......|+.++
T Consensus 123 i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~ 193 (452)
T cd07102 123 IAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADP 193 (452)
T ss_pred EcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCC
Confidence 345555432 2347788999999999873 2 3455667777653 2333332 23455565553
No 232
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=31.29 E-value=1.8e+02 Score=25.29 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=27.2
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 174 I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 220 (511)
T TIGR01237 174 ISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEA 220 (511)
T ss_pred ECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh
Confidence 45666644443 47788999999999773 2 345566666663
No 233
>PRK10411 DNA-binding transcriptional activator FucR; Provisional
Probab=31.23 E-value=2.4e+02 Score=21.76 Aligned_cols=90 Identities=12% Similarity=0.030 Sum_probs=54.8
Q ss_pred HHHHh-CCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccC-------CCCHHHHH
Q psy9665 17 QAICM-NNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAA-------PVGKSTLD 88 (207)
Q Consensus 17 ~~l~~-G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~-------~~~~~~~~ 88 (207)
..+.. |.++++-...+...+.+.+.+...|++.-.+.+...|... +.++.++.||. .+.+...+
T Consensus 88 a~lI~~gd~Ifld~GtT~~~l~~~L~~~~ltVvTNs~~ia~~l~~~--------~~~~vil~GG~~~~~~~~~~G~~a~~ 159 (240)
T PRK10411 88 LAWIEEGMVIALDASSTCWYLARQLPDINIQVFTNSHPICQELGKR--------ERIQLISSGGTLERKYGCYVNPSLIS 159 (240)
T ss_pred HHhCCCCCEEEEcCcHHHHHHHHhhCCCCeEEEeCCHHHHHHHhcC--------CCCEEEEECCEEeCCCCceECHHHHH
Confidence 33444 5544444456677788888666788777777777777544 33666788884 23455666
Q ss_pred HHHHHhCCCcCcceeccccccccceeec
Q psy9665 89 QVGERLGLSMDSMKQGYGMTELTILVTF 116 (207)
Q Consensus 89 ~~~~~~~~~~~~i~~~YG~tE~g~~~~~ 116 (207)
.+++..... -++..-|.++.+++...
T Consensus 160 ~l~~~~~d~--afis~~gi~~~~G~~~~ 185 (240)
T PRK10411 160 QLKSLEIDL--FIFSCEGIDSSGALWDS 185 (240)
T ss_pred HHHhcCCCE--EEEeceeECCCCCcccC
Confidence 666532222 38888888755444443
No 234
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=31.16 E-value=2.3e+02 Score=24.35 Aligned_cols=40 Identities=13% Similarity=0.181 Sum_probs=26.2
Q ss_pred ccccchHHHHHH--HHHHHHhCCeEEEeCC-C---CHHHHHHHHHh
Q psy9665 3 LVPFFHGYGLLL--MLQAICMNNKLVVLPH-F---DGHLFLSSIEK 42 (207)
Q Consensus 3 ~~Pl~h~~g~~~--~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~ 42 (207)
..|+++-..+.. +..+|.+|.++++-|+ . .+..+.+++++
T Consensus 144 I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~ 189 (472)
T TIGR03374 144 IAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD 189 (472)
T ss_pred ECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHH
Confidence 456666655543 6688999999999763 2 34455566554
No 235
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=30.99 E-value=1.9e+02 Score=25.02 Aligned_cols=47 Identities=15% Similarity=0.142 Sum_probs=38.7
Q ss_pred HHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHH
Q psy9665 13 LLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLA 59 (207)
Q Consensus 13 ~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 59 (207)
..+++++..|+.++..+ .+.++.+...+++.+++.+...+.....+.
T Consensus 86 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~ 133 (542)
T PRK06155 86 DVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALE 133 (542)
T ss_pred HHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHH
Confidence 35888899999999887 678999999999999999988776655543
No 236
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=30.87 E-value=2.4e+02 Score=24.18 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=27.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-|+ . ....+.+++++.
T Consensus 148 I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a 194 (476)
T cd07142 148 IIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEA 194 (476)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHc
Confidence 45666655443 36678999999999773 3 345566777765
No 237
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=30.71 E-value=21 Score=31.51 Aligned_cols=37 Identities=19% Similarity=0.188 Sum_probs=25.4
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeec
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPA 50 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 50 (207)
.+++++..|+..+.+. .+.++.+...+++.++.++..
T Consensus 124 ~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~ 161 (628)
T TIGR02316 124 AMLACARIGAIHSVVFGGFASHSLALRIDDATPKLIVS 161 (628)
T ss_pred HHHHHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEE
Confidence 4667777777776665 566777777777777766654
No 238
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=30.58 E-value=2.3e+02 Score=24.50 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=26.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~a 210 (494)
T PRK09847 164 IVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEA 210 (494)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHc
Confidence 45665555443 36678999999999773 2 344566666665
No 239
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=30.56 E-value=1.9e+02 Score=24.73 Aligned_cols=60 Identities=15% Similarity=0.170 Sum_probs=33.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc-CceEeecc----HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY-RVTLLPAV----PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~-~~t~~~~~----P~~~~~l~~~~ 62 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++. ...++..+ ......|+.++
T Consensus 145 I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~alP~gv~~~v~g~~~~~~~~l~~~~ 215 (475)
T PRK13473 145 IAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADILPPGVLNVVTGRGATVGDALVGHP 215 (475)
T ss_pred EccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHhCCcCcEEEEecCchHHHHHHhcCC
Confidence 45666655443 36788999999999773 3 344555566553 32333332 23445555543
No 240
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=30.50 E-value=2.6e+02 Score=24.53 Aligned_cols=41 Identities=10% Similarity=0.132 Sum_probs=27.8
Q ss_pred ccccchHHHHHH--HHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLLL--MLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~~--~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+.. +..+|.+|.++++-+. . ....+.+++++.
T Consensus 202 I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~ea 248 (538)
T PLN02466 202 IIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEA 248 (538)
T ss_pred ECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhc
Confidence 456776665543 6678999999999773 2 445666677664
No 241
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=30.38 E-value=1.7e+02 Score=24.73 Aligned_cols=41 Identities=22% Similarity=0.232 Sum_probs=27.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~ 43 (207)
..|.++-..+. .+..+|..|.++++-+. .....+.+++.+.
T Consensus 126 I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~a 172 (451)
T cd07150 126 ITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEA 172 (451)
T ss_pred ECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHh
Confidence 45666655433 47888999999999773 2445666777664
No 242
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=30.19 E-value=23 Score=30.38 Aligned_cols=38 Identities=5% Similarity=-0.022 Sum_probs=26.5
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+... ...++.+...+++.++..+...
T Consensus 89 ~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~ 127 (527)
T TIGR02275 89 VFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYIID 127 (527)
T ss_pred HHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEc
Confidence 4667777787766554 4567777778887777776654
No 243
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=30.07 E-value=2.9e+02 Score=23.61 Aligned_cols=60 Identities=12% Similarity=0.087 Sum_probs=35.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC--ceEeecc----HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR--VTLLPAV----PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~--~t~~~~~----P~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-++ .....+.+++++.. ..++..+ ..+-+.|+.++
T Consensus 140 I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~ 211 (467)
T TIGR01804 140 IGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHK 211 (467)
T ss_pred ECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCC
Confidence 35666555443 36788999999999773 24556667776642 2333332 33455565553
No 244
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=30.02 E-value=18 Score=32.58 Aligned_cols=40 Identities=18% Similarity=0.202 Sum_probs=21.4
Q ss_pred cccccCCCcCccc-CCcEEEcCeeEEEE-EecCccccccccC
Q psy9665 160 APYCRKMSLGAYL-CHWLKLKGKQTVLV-LGFGSQSCEENLG 199 (207)
Q Consensus 160 ~gy~~~~~~~~~~-~d~~~~~~~~~~~i-~grg~~~~~~~~~ 199 (207)
.||+++.|..+.. ++.+++.||.+..+ +.+|.++.+++++
T Consensus 535 dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE 576 (700)
T PTZ00216 535 DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALE 576 (700)
T ss_pred cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHH
Confidence 3455555655543 44666666544433 3666666655544
No 245
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=29.99 E-value=2.1e+02 Score=20.44 Aligned_cols=88 Identities=15% Similarity=0.104 Sum_probs=55.8
Q ss_pred HHhCCeEEEeCCCCHHHHHHHHHhc-CceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCCC-------CHHHHHHH
Q psy9665 19 ICMNNKLVVLPHFDGHLFLSSIEKY-RVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAPV-------GKSTLDQV 90 (207)
Q Consensus 19 l~~G~~~v~~~~~~~~~~~~~i~~~-~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~~-------~~~~~~~~ 90 (207)
+--|.++++-...+...+.+.|.+. +++++--...+...|.+.+ .++.++.||.-- .+...+.+
T Consensus 17 I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~~--------~~~vi~~GG~~~~~~~~~~G~~a~~~l 88 (161)
T PF00455_consen 17 IEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSENP--------NIEVILLGGEVNPKSLSFVGPIALEAL 88 (161)
T ss_pred CCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhcC--------ceEEEEeCCEEEcCCCcEECchHHHHH
Confidence 3345555555567788889988887 8888777777888886663 577788888322 24455555
Q ss_pred HHHhCCCcCcceeccccccccceeec
Q psy9665 91 GERLGLSMDSMKQGYGMTELTILVTF 116 (207)
Q Consensus 91 ~~~~~~~~~~i~~~YG~tE~g~~~~~ 116 (207)
++..... -++..-|.++-.++...
T Consensus 89 ~~~~~d~--afi~~~gi~~~~G~~~~ 112 (161)
T PF00455_consen 89 RQFRFDK--AFIGADGISEEGGLTTS 112 (161)
T ss_pred Hhhccce--EEecccEecCCCccccc
Confidence 5432222 37777777764444433
No 246
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=29.93 E-value=2.2e+02 Score=24.47 Aligned_cols=39 Identities=13% Similarity=0.152 Sum_probs=24.1
Q ss_pred cccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHHh
Q psy9665 4 VPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIEK 42 (207)
Q Consensus 4 ~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~ 42 (207)
.|+++-..+. -+..+|.+|.++++-++ .. ...+.+++++
T Consensus 137 ~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~ 181 (465)
T PRK15398 137 TPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNE 181 (465)
T ss_pred eCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHH
Confidence 4554444333 36678999999999873 33 3445556553
No 247
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=29.85 E-value=2.3e+02 Score=24.10 Aligned_cols=41 Identities=17% Similarity=0.353 Sum_probs=27.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|.++-.... .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 140 I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~a 186 (468)
T cd07088 140 ILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEA 186 (468)
T ss_pred EccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHc
Confidence 45666555443 47788999999999773 2 445667777764
No 248
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=29.83 E-value=2.5e+02 Score=23.79 Aligned_cols=41 Identities=20% Similarity=0.205 Sum_probs=26.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 121 I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~ 167 (446)
T cd07106 121 IVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV 167 (446)
T ss_pred EcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh
Confidence 34555554433 36788999999999773 2 445556666653
No 249
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=29.40 E-value=1.3e+02 Score=25.66 Aligned_cols=68 Identities=18% Similarity=0.240 Sum_probs=40.1
Q ss_pred cccchHHHHH--HHHHHHHhCCeEEEeC-CC---CHHHHHHHHHhc--C---ceEeec-cHHHHHHHHhCCCCCCCCCCc
Q psy9665 4 VPFFHGYGLL--LMLQAICMNNKLVVLP-HF---DGHLFLSSIEKY--R---VTLLPA-VPPLVVFLAKSPLVDQYDLSS 71 (207)
Q Consensus 4 ~Pl~h~~g~~--~~~~~l~~G~~~v~~~-~~---~~~~~~~~i~~~--~---~t~~~~-~P~~~~~l~~~~~~~~~~l~~ 71 (207)
.|.++-.... .+..+|..|.++++-+ .. ....+.+++++. . ++++.+ -......|+.++ .
T Consensus 134 ~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~--------~ 205 (462)
T PF00171_consen 134 TPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHP--------D 205 (462)
T ss_dssp E-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTT--------T
T ss_pred ccccccccccccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeecc--------c
Confidence 3444443333 4778899999999965 33 456667777662 2 344455 345667777664 3
Q ss_pred eeEEEEcc
Q psy9665 72 LTNIRCGA 79 (207)
Q Consensus 72 lr~~~~~G 79 (207)
++.+.+.|
T Consensus 206 v~~v~ftG 213 (462)
T PF00171_consen 206 VDLVSFTG 213 (462)
T ss_dssp EEEEEEES
T ss_pred cceeeecc
Confidence 66666655
No 250
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=29.38 E-value=2.4e+02 Score=24.44 Aligned_cols=60 Identities=12% Similarity=0.211 Sum_probs=35.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc--CceEeeccH----HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY--RVTLLPAVP----PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~~ 62 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++.+. ...++..++ .....|+.++
T Consensus 167 I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~ 238 (500)
T TIGR01238 167 ISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDP 238 (500)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCC
Confidence 45666655443 37788999999999873 3 334455666664 223333332 4455565553
No 251
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=29.06 E-value=1.8e+02 Score=25.00 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=27.8
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ ..+..+.+++++.
T Consensus 146 I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~a 192 (481)
T TIGR03216 146 ISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAV 192 (481)
T ss_pred ECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHc
Confidence 34666665543 36688999999999773 2455667777775
No 252
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=28.98 E-value=2.6e+02 Score=24.02 Aligned_cols=60 Identities=17% Similarity=0.157 Sum_probs=33.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHHhc-C---ceEeecc-HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIEKY-R---VTLLPAV-PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~~-~---~t~~~~~-P~~~~~l~~~~ 62 (207)
..|.++-..+. -+..+|.+|.++++-|+ .. ...+.+++++. . ++++.+. ...-..|+.++
T Consensus 143 I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~alP~gvv~~v~g~~~~~~~~L~~~~ 213 (479)
T cd07116 143 IIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDLLPPGVVNVVNGFGLEAGKPLASSK 213 (479)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHHCCcCcEEEEecCchhHHHHHhcCC
Confidence 34666555444 37788999999999873 33 34455555542 2 2333332 23445565554
No 253
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=28.98 E-value=3.6e+02 Score=22.86 Aligned_cols=59 Identities=19% Similarity=0.169 Sum_probs=35.1
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc--CceEeeccH----HHHHHHHhC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY--RVTLLPAVP----PLVVFLAKS 61 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~--~~t~~~~~P----~~~~~l~~~ 61 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++. ...++..++ .+-..|+++
T Consensus 130 I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~ 200 (453)
T cd07094 130 ITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAAD 200 (453)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcC
Confidence 35666654433 47788999999999773 2 456667777774 333333332 234555555
No 254
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=28.94 E-value=1.6e+02 Score=23.93 Aligned_cols=46 Identities=17% Similarity=0.154 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 13 LLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 13 ~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
..+++++..|+.++..+ ...++.+...+++.+++.+...+.....+
T Consensus 40 ~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 40 VAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred HHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 35788899999999887 56788888999999999998877655544
No 255
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=28.91 E-value=1.7e+02 Score=24.91 Aligned_cols=41 Identities=20% Similarity=0.236 Sum_probs=26.9
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+.+-.... .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 126 I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~a 172 (457)
T cd07114 126 ITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEA 172 (457)
T ss_pred ECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHc
Confidence 34555544433 36788999999999873 2 345666777664
No 256
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=28.76 E-value=1.5e+02 Score=24.28 Aligned_cols=39 Identities=8% Similarity=0.074 Sum_probs=32.7
Q ss_pred HHHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeec
Q psy9665 12 LLLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPA 50 (207)
Q Consensus 12 ~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 50 (207)
+..+++++..|+..+.++ ....+.+...+++.++++++.
T Consensus 60 ~~~~~A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 60 VVAFLACLRAGAIPVPLDPSLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp HHHHHHHHHTT-EEEEEETTSSHHHHHHHHHHHTESEEEE
T ss_pred eeeecccccccccccccccccccccccccccccceeEEEE
Confidence 346888899999999986 578899999999999999885
No 257
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=28.56 E-value=3.2e+02 Score=22.22 Aligned_cols=80 Identities=13% Similarity=0.188 Sum_probs=44.4
Q ss_pred ccccchHHH--HHHHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC-----ceEeeccH-HHHHHHHhCCCCCCCCCC
Q psy9665 3 LVPFFHGYG--LLLMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR-----VTLLPAVP-PLVVFLAKSPLVDQYDLS 70 (207)
Q Consensus 3 ~~Pl~h~~g--~~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~-----~t~~~~~P-~~~~~l~~~~~~~~~~l~ 70 (207)
..|.++-.. +..++.++.+|.++++-++ . .+..+.+.+++.. ++++.+-. .....|+.++
T Consensus 99 i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~-------- 170 (367)
T cd06534 99 ITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHP-------- 170 (367)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCC--------
Confidence 455555543 3357788999999998763 2 4566677777664 22233322 2455555553
Q ss_pred ceeEEEEccCCCCHHHHHHHHHH
Q psy9665 71 SLTNIRCGAAPVGKSTLDQVGER 93 (207)
Q Consensus 71 ~lr~~~~~G~~~~~~~~~~~~~~ 93 (207)
.++.+.+.|. .+..+.+.+.
T Consensus 171 ~vd~v~~tGs---~~~~~~v~~~ 190 (367)
T cd06534 171 RVDKISFTGS---TAVGKAIMKA 190 (367)
T ss_pred CcCEEEEECC---HHHHHHHHHH
Confidence 2455666552 4444444443
No 258
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=28.52 E-value=2.5e+02 Score=24.13 Aligned_cols=41 Identities=15% Similarity=0.269 Sum_probs=27.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 151 I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~a 197 (484)
T cd07144 151 IIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEA 197 (484)
T ss_pred ECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh
Confidence 45656555433 37788999999999773 2 345566666665
No 259
>PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 []. The proteins show weak similarity to transthyretin (formerly called prealbumin) which transports thyroid hormones. The specific function of this protein is unknown.; GO: 0005615 extracellular space
Probab=28.48 E-value=1.3e+02 Score=18.70 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=14.8
Q ss_pred ccccccCCceEEEEeCCC
Q psy9665 125 SVGKVMPSMKMKVLVKSH 142 (207)
Q Consensus 125 ~~G~~~~~~~~~i~d~~~ 142 (207)
+-|+|.++++|++.+.+.
T Consensus 6 C~~~P~~~~~V~L~e~d~ 23 (80)
T PF01060_consen 6 CGGKPAKNVKVKLWEDDY 23 (80)
T ss_pred eCCccCCCCEEEEEECCC
Confidence 347789999999998875
No 260
>TIGR02482 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokinase (EC 2.7.1.11) catalyzes the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This model hits bacterial ATP-dependent 6-phosphofructokinases which lack a beta-hairpin loop present in TIGR02483 family members. TIGR02483 contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. TIGR02477 represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (EC 2.7.1.90).
Probab=28.41 E-value=1.2e+02 Score=24.34 Aligned_cols=35 Identities=14% Similarity=0.418 Sum_probs=28.1
Q ss_pred hHHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHHh
Q psy9665 8 HGYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIEK 42 (207)
Q Consensus 8 h~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~ 42 (207)
...|++.+.+++..|+.+++.| +++.+.+.+.+++
T Consensus 170 R~~G~lAl~~~la~gad~iliPE~~~~~~~l~~~i~~ 206 (301)
T TIGR02482 170 RHAGDLALYSGIATGAEIIIIPEFDYDIDELIQRLKE 206 (301)
T ss_pred CCHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHH
Confidence 3467778889999999999988 6888888877654
No 261
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=28.35 E-value=2.7e+02 Score=23.70 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=27.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+.+-.... .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 123 I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~a 169 (457)
T cd07090 123 IGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEA 169 (457)
T ss_pred ECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHc
Confidence 44666655443 36788999999999773 2 455667777765
No 262
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=28.18 E-value=27 Score=30.11 Aligned_cols=41 Identities=0% Similarity=-0.204 Sum_probs=30.2
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPL 54 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~ 54 (207)
.+++++..|+..+..+ .+.++.+...+++.++..+...+..
T Consensus 80 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~ 121 (539)
T PRK07008 80 AYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTF 121 (539)
T ss_pred HHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchh
Confidence 4677788888888776 5677888888888888776655543
No 263
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=28.09 E-value=2.5e+02 Score=23.95 Aligned_cols=70 Identities=14% Similarity=0.096 Sum_probs=39.4
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHH----hc--CceEeeccH----HHHHHHHhCCCCCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIE----KY--RVTLLPAVP----PLVVFLAKSPLVDQ 66 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~----~~--~~t~~~~~P----~~~~~l~~~~~~~~ 66 (207)
..|+++-..+. -+..+|.+|.++++-|+ .. ...+.++++ +. ...++..++ ...+.|+.++.
T Consensus 102 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~--- 178 (439)
T cd07081 102 ITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPG--- 178 (439)
T ss_pred ECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCC---
Confidence 45666665554 37788999999999874 23 334445553 32 223333332 34566666643
Q ss_pred CCCCceeEEEEccC
Q psy9665 67 YDLSSLTNIRCGAA 80 (207)
Q Consensus 67 ~~l~~lr~~~~~G~ 80 (207)
++.+.+.|+
T Consensus 179 -----V~~V~FTGs 187 (439)
T cd07081 179 -----IGLLLATGG 187 (439)
T ss_pred -----CCEEEEECC
Confidence 555555553
No 264
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=27.98 E-value=2.1e+02 Score=24.69 Aligned_cols=60 Identities=10% Similarity=0.114 Sum_probs=35.6
Q ss_pred ccccchHHHHHH--HHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc--C---ceEeecc-HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLLL--MLQAICMNNKLVVLPH-F---DGHLFLSSIEKY--R---VTLLPAV-PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~~--~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~--~---~t~~~~~-P~~~~~l~~~~ 62 (207)
..|+++-..+.. +..+|.+|.++++-|+ . ....+.+++++. . ++++.+. ......|+.++
T Consensus 153 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~ 224 (482)
T PRK11241 153 ITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNP 224 (482)
T ss_pred ECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCC
Confidence 456676665543 7788999999999873 3 344556666664 2 2333332 23455666654
No 265
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to a subfamily of the PFKA family (cd00363) and include bacterial ATP-dependent phosphofructokinases. These are allosrterically regulated homotetramers; the subunits are of about 320 amino acids.
Probab=27.87 E-value=1.4e+02 Score=24.30 Aligned_cols=34 Identities=21% Similarity=0.379 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHHh
Q psy9665 9 GYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIEK 42 (207)
Q Consensus 9 ~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~ 42 (207)
..|++.+.+++..|+.+++.| +++.+.+.+.+++
T Consensus 171 ~~G~LA~~~ala~ga~~iliPE~~~~~~~~~~~i~~ 206 (317)
T cd00763 171 HCGDIALAAGIAGGAEFIVIPEAEFDREEVANRIKA 206 (317)
T ss_pred ChHHHHHHHHHHcCCCEEEeCCCCCCHHHHHHHHHH
Confidence 467778888999999999988 6788888887753
No 266
>PRK05857 acyl-CoA synthetase; Validated
Probab=27.80 E-value=25 Score=30.34 Aligned_cols=41 Identities=10% Similarity=-0.040 Sum_probs=31.9
Q ss_pred HHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHH
Q psy9665 13 LLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPP 53 (207)
Q Consensus 13 ~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 53 (207)
..+++++..|+..+.++ .+.++.+...++..++..+...+.
T Consensus 81 ~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~ 122 (540)
T PRK05857 81 LSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPG 122 (540)
T ss_pred HHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEecc
Confidence 35788888999998887 567888888888888877766553
No 267
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=27.49 E-value=1.9e+02 Score=24.64 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=25.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHHh
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIEK 42 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~ 42 (207)
..|+++-..+. .+..+|.+|.++++-++ .. ...+.+++++
T Consensus 123 I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ 168 (456)
T cd07107 123 IVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELARE 168 (456)
T ss_pred ECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHH
Confidence 45665554433 47788999999999873 33 3445555555
No 268
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=27.45 E-value=2.1e+02 Score=24.23 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=26.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHh
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEK 42 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~ 42 (207)
..|+++-.... .+..+|.+|.++++-++ . ....+.+++++
T Consensus 125 I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~ 170 (450)
T cd07092 125 IAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE 170 (450)
T ss_pred ECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh
Confidence 45666554433 36788999999999773 2 44556666665
No 269
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=27.43 E-value=2.6e+02 Score=23.87 Aligned_cols=41 Identities=7% Similarity=0.045 Sum_probs=26.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~~~ 43 (207)
..|+++-..+. -+..+|.+|.++++-++ .. ...+.+++++.
T Consensus 133 I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~a 179 (462)
T PRK13968 133 IMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDA 179 (462)
T ss_pred EcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHc
Confidence 34666555443 26778999999999763 33 34555666654
No 270
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=26.98 E-value=3.8e+02 Score=22.42 Aligned_cols=42 Identities=14% Similarity=0.225 Sum_probs=28.2
Q ss_pred ccccchHHH--HHHHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC
Q psy9665 3 LVPFFHGYG--LLLMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR 44 (207)
Q Consensus 3 ~~Pl~h~~g--~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~ 44 (207)
..|..+-.. +..+..+|.+|.++++-++ ..+..+.+++++..
T Consensus 103 i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag 150 (432)
T cd07078 103 ITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAG 150 (432)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcC
Confidence 455555432 2347788999999998763 24567788888764
No 271
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=26.90 E-value=3.2e+02 Score=23.60 Aligned_cols=41 Identities=20% Similarity=0.257 Sum_probs=27.1
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+. .+..+|.+|.++++-++ . ....+.+++.+.
T Consensus 154 I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~a 200 (486)
T cd07140 154 VIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKA 200 (486)
T ss_pred EcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHc
Confidence 45666665433 37788999999999773 2 445566666664
No 272
>PF15621 PROL5-SMR: Proline-rich submaxillary gland androgen-regulated family
Probab=26.83 E-value=44 Score=22.57 Aligned_cols=25 Identities=8% Similarity=0.127 Sum_probs=21.8
Q ss_pred ccchHHHHHHHHHHHHhCCeEEEeC
Q psy9665 5 PFFHGYGLLLMLQAICMNNKLVVLP 29 (207)
Q Consensus 5 Pl~h~~g~~~~~~~l~~G~~~v~~~ 29 (207)
+|+.++|++.+.+|+..|-+.-..+
T Consensus 3 ~L~li~GLw~Li~CF~~~E~~Rgpr 27 (113)
T PF15621_consen 3 SLYLIFGLWALIGCFTPGESQRGPR 27 (113)
T ss_pred ceehHHHHHHHHHHccccccccCCC
Confidence 6889999999999999988887765
No 273
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=26.76 E-value=3.2e+02 Score=23.55 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=26.9
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|.++-..+. .+..+|.+|.++++-+. . ....+.+++.+.
T Consensus 151 I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~a 197 (481)
T cd07143 151 IIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEA 197 (481)
T ss_pred ECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhc
Confidence 34555555443 36788999999999773 2 345566667664
No 274
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=26.69 E-value=3e+02 Score=23.42 Aligned_cols=28 Identities=21% Similarity=0.285 Sum_probs=18.8
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH 30 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~ 30 (207)
..|.++-.... .+..+|.+|.++++-++
T Consensus 127 I~p~n~P~~~~~~~~~~ALaaGN~VIlKps 156 (465)
T cd07098 127 IVSWNYPFHNLLGPIIAALFAGNAIVVKVS 156 (465)
T ss_pred EcccCcHHHHHHHHHHHHHHcCCEEEEECC
Confidence 34555444333 36788999999999773
No 275
>PRK12582 acyl-CoA synthetase; Provisional
Probab=26.55 E-value=24 Score=31.19 Aligned_cols=14 Identities=14% Similarity=0.038 Sum_probs=6.6
Q ss_pred HHHHHHhCCeEEEe
Q psy9665 15 MLQAICMNNKLVVL 28 (207)
Q Consensus 15 ~~~~l~~G~~~v~~ 28 (207)
+++++..|+..+..
T Consensus 122 ~lA~~~~G~v~vpl 135 (624)
T PRK12582 122 TLAAMQAGVPAAPV 135 (624)
T ss_pred HHHHHHcCCeEeec
Confidence 44444445544444
No 276
>PF06871 TraH_2: TraH_2; InterPro: IPR010680 This family consists of several TraH proteins, which seem to be specific to Agrobacterium and Rhizobium species. This protein is thought to be involved in conjugal transfer but its function is unknown. This family does not appear to be related to IPR010927 from INTERPRO.
Probab=26.42 E-value=90 Score=23.16 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.5
Q ss_pred HHhCCeEEEeCC-CCHHHHHHHHHhc
Q psy9665 19 ICMNNKLVVLPH-FDGHLFLSSIEKY 43 (207)
Q Consensus 19 l~~G~~~v~~~~-~~~~~~~~~i~~~ 43 (207)
.-+|+.+++.|+ .+|+..+.+++++
T Consensus 37 VrsG~R~vLVPkp~tpdeAm~liR~~ 62 (206)
T PF06871_consen 37 VRSGGRLVLVPKPKTPDEAMALIRQY 62 (206)
T ss_pred EEECCEEEEecCCCCHHHHHHHHHHh
Confidence 457999999984 6899999999987
No 277
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=26.27 E-value=3.3e+02 Score=23.58 Aligned_cols=41 Identities=20% Similarity=0.229 Sum_probs=27.8
Q ss_pred ccccchHHHHHH--HHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLLL--MLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~~--~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+++-..+.. +..+|.+|.++++-|+ . .+..+.+++.+.
T Consensus 149 I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~a 195 (489)
T cd07126 149 ITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLC 195 (489)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh
Confidence 467776665443 6788999999999773 2 445566666654
No 278
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=26.11 E-value=29 Score=29.85 Aligned_cols=38 Identities=13% Similarity=0.055 Sum_probs=27.3
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
..++++..|+.++... ...++.+...+++.+++.+...
T Consensus 94 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~ 132 (538)
T TIGR03208 94 LYLACARIGAVLNPLMPIFRERELSFMLNHADSKVFVVP 132 (538)
T ss_pred HHHHHHhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEc
Confidence 4677788888777665 4567777778888887776653
No 279
>PRK13383 acyl-CoA synthetase; Provisional
Probab=25.97 E-value=2.1e+02 Score=24.40 Aligned_cols=45 Identities=7% Similarity=0.138 Sum_probs=37.1
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
.+++++..|+..+..+ .+.++.+...+++.++..+...+.....+
T Consensus 101 ~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 146 (516)
T PRK13383 101 AVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERI 146 (516)
T ss_pred HHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHH
Confidence 5778899999999887 57889999999999999988877665544
No 280
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=25.97 E-value=34 Score=30.13 Aligned_cols=38 Identities=18% Similarity=0.237 Sum_probs=27.1
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+... .+.+..+...+++.++.++...
T Consensus 125 ~~lA~~~~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~ 163 (629)
T PRK10524 125 AMLACARIGAIHSVVFGGFASHSLAARIDDAKPVLIVSA 163 (629)
T ss_pred HHHHHHHhCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEc
Confidence 4677777787777665 5677777777877777776643
No 281
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=25.81 E-value=2.3e+02 Score=24.60 Aligned_cols=45 Identities=18% Similarity=0.116 Sum_probs=37.1
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
.+++++..|+.++.+. .+.++.+...+++.+++.+...+..+..+
T Consensus 114 ~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 159 (570)
T PRK04319 114 ALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERK 159 (570)
T ss_pred HHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhcc
Confidence 5778899999988776 67899999999999999998887765443
No 282
>PRK07867 acyl-CoA synthetase; Validated
Probab=25.80 E-value=2.3e+02 Score=24.33 Aligned_cols=43 Identities=16% Similarity=0.009 Sum_probs=35.7
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVV 56 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 56 (207)
.+++++..|++++.++ ...++.+...+++.+++.+........
T Consensus 70 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~ 113 (529)
T PRK07867 70 LLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAE 113 (529)
T ss_pred HHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHH
Confidence 5788899999999876 568889999999999999887765544
No 283
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=25.59 E-value=3.2e+02 Score=23.16 Aligned_cols=60 Identities=15% Similarity=0.164 Sum_probs=34.9
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCCC----CHHHHHHHHHhcCc---eEeecc---HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPHF----DGHLFLSSIEKYRV---TLLPAV---PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~~----~~~~~~~~i~~~~~---t~~~~~---P~~~~~l~~~~ 62 (207)
..|.++-.... .+..+|.+|.++++-++. ....+.+++++... .++..+ ......|+.++
T Consensus 107 I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~~~~~l~~~~ 178 (442)
T cd07084 107 IGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHP 178 (442)
T ss_pred EcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcHHHHHHHcCC
Confidence 45665544332 377889999999987732 44566777776532 333322 23455565554
No 284
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=25.13 E-value=35 Score=29.40 Aligned_cols=40 Identities=10% Similarity=0.088 Sum_probs=28.0
Q ss_pred cccccCCCcCccc-CCcEEEcCeeEEEEEecCccccccccC
Q psy9665 160 APYCRKMSLGAYL-CHWLKLKGKQTVLVLGFGSQSCEENLG 199 (207)
Q Consensus 160 ~gy~~~~~~~~~~-~d~~~~~~~~~~~i~grg~~~~~~~~~ 199 (207)
.|||...|..+.. ++.+++.||.+..+.-+|.++.+.+++
T Consensus 413 ~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE 453 (545)
T PRK07768 413 DGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIE 453 (545)
T ss_pred CCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHH
Confidence 4567777777664 467888887777777778777766553
No 285
>PRK06060 acyl-CoA synthetase; Validated
Probab=24.83 E-value=33 Score=30.82 Aligned_cols=39 Identities=8% Similarity=0.042 Sum_probs=24.4
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP 52 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P 52 (207)
.+++++..|+..+..+ .+.++.+...+++.++..+....
T Consensus 71 ~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~ 110 (705)
T PRK06060 71 LLLACLARGVMAFLANPELHRDDHALAARNTEPALVVTSD 110 (705)
T ss_pred HHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEch
Confidence 4666677777666655 45566666666666666655433
No 286
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=24.71 E-value=2.5e+02 Score=24.29 Aligned_cols=45 Identities=11% Similarity=0.014 Sum_probs=36.2
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
.+++++..|+..+.+. .+..+.+...+++.++.++.........+
T Consensus 83 ~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 128 (539)
T PRK06334 83 AYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHL 128 (539)
T ss_pred HHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHH
Confidence 5788899999988887 56788999999999999888766655443
No 287
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=24.67 E-value=3.7e+02 Score=23.10 Aligned_cols=40 Identities=15% Similarity=0.262 Sum_probs=26.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHh
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEK 42 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~ 42 (207)
..|+++-..+. .+..+|.+|.++++-|+ . ....+.+++++
T Consensus 143 I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~ 188 (475)
T cd07117 143 IIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQD 188 (475)
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHH
Confidence 45666655544 36788999999999773 2 34455566654
No 288
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=24.66 E-value=3e+02 Score=23.57 Aligned_cols=41 Identities=12% Similarity=0.074 Sum_probs=26.8
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++.
T Consensus 140 I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a 186 (478)
T cd07086 140 ITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEV 186 (478)
T ss_pred ECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHh
Confidence 35555544333 47788999999999873 2 345666777664
No 289
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=24.57 E-value=2.5e+02 Score=24.47 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=25.9
Q ss_pred cccchHHHH--HHHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 4 VPFFHGYGL--LLMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 4 ~Pl~h~~g~--~~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
.|+++-..+ ..+..+|.+|.++++-+. . .+..+.+++++.
T Consensus 175 ~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~ea 220 (518)
T cd07125 175 SPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEA 220 (518)
T ss_pred CCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHc
Confidence 455543333 247788999999998763 3 345667777764
No 290
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=24.55 E-value=3.2e+02 Score=23.17 Aligned_cols=38 Identities=16% Similarity=0.135 Sum_probs=23.5
Q ss_pred cccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHH
Q psy9665 4 VPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIE 41 (207)
Q Consensus 4 ~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~ 41 (207)
.|+++-.... .+..+|.+|.++++-++ . ....+.++++
T Consensus 105 ~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~ 148 (429)
T cd07121 105 TPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELIN 148 (429)
T ss_pred ccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHH
Confidence 4554443333 36678999999999773 2 3345555554
No 291
>PRK13390 acyl-CoA synthetase; Provisional
Probab=24.03 E-value=34 Score=29.01 Aligned_cols=37 Identities=11% Similarity=0.058 Sum_probs=25.2
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeec
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPA 50 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~ 50 (207)
.+++++..|+..+..+ .+.++.+..++++.++..+..
T Consensus 65 ~~la~~~~Ga~~~~l~~~~~~~~~~~~~~~~~~~~~i~ 102 (501)
T PRK13390 65 VLWAALRSGLYITAINHHLTAPEADYIVGDSGARVLVA 102 (501)
T ss_pred HHHHHHHhCCEEeccccCCCHHHHHHHHHhcCCcEEEE
Confidence 4667777788777665 456777777777777666544
No 292
>TIGR02148 Fibro_Slime fibro-slime domain. This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain
Probab=23.90 E-value=85 Score=20.30 Aligned_cols=16 Identities=19% Similarity=0.437 Sum_probs=6.7
Q ss_pred cEEEcCeeEEEEEecC
Q psy9665 175 WLKLKGKQTVLVLGFG 190 (207)
Q Consensus 175 ~~~~~~~~~~~i~grg 190 (207)
.+.+.+|+++|+.-.+
T Consensus 21 ~F~F~GDDDvWVFIn~ 36 (90)
T TIGR02148 21 YFEFRGDDDVWVFINN 36 (90)
T ss_pred EEEEEcCCeEEEEECC
Confidence 3444444444444433
No 293
>KOG2451|consensus
Probab=23.86 E-value=1.6e+02 Score=24.72 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=30.3
Q ss_pred cccchHHHHHH--HHHHHHhCCeEEEeCC----CCHHHHHHHHHhcCc
Q psy9665 4 VPFFHGYGLLL--MLQAICMNNKLVVLPH----FDGHLFLSSIEKYRV 45 (207)
Q Consensus 4 ~Pl~h~~g~~~--~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~ 45 (207)
.|.++-+..+. .-++|..|+|+|+-|. +++..+.++.++..+
T Consensus 167 tPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGi 214 (503)
T KOG2451|consen 167 TPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGI 214 (503)
T ss_pred cCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCC
Confidence 57777777664 7788999999999883 455666666666544
No 294
>PRK07868 acyl-CoA synthetase; Validated
Probab=23.65 E-value=34 Score=32.36 Aligned_cols=42 Identities=12% Similarity=0.027 Sum_probs=29.3
Q ss_pred HHHHHHHhCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVF 57 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 57 (207)
.+++++..|+..+.+++- ..+..+++..++.++...+..+..
T Consensus 513 a~lA~~~aGav~vpl~p~--~~l~~il~~s~~~~li~~~~~~~~ 554 (994)
T PRK07868 513 AIAALSRLGAVAVLMPPD--TDLAAAVRLGGVTEIITDPTNLEA 554 (994)
T ss_pred HHHHHHhcCCEEEEeCCc--hhHHHHHhccCCeEEEEChHHHHH
Confidence 577888889988888752 355667777788877766554443
No 295
>PRK14071 6-phosphofructokinase; Provisional
Probab=23.48 E-value=1.3e+02 Score=24.90 Aligned_cols=34 Identities=12% Similarity=0.259 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHHh
Q psy9665 9 GYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIEK 42 (207)
Q Consensus 9 ~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~ 42 (207)
-.|++.+.+++..|+.+++.| +++.+.+.+.+++
T Consensus 187 ~~G~LAl~~~la~ga~~iliPE~~~~~~~l~~~i~~ 222 (360)
T PRK14071 187 DAGHIALAAGIAGGADVILIPEIPYTLENVCKKIRE 222 (360)
T ss_pred CccHHHHHhHhhcCCCEEEECCCCCCHHHHHHHHHH
Confidence 467777888899999999988 6888888887754
No 296
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=23.46 E-value=4.6e+02 Score=22.28 Aligned_cols=40 Identities=15% Similarity=0.163 Sum_probs=25.5
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHh
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEK 42 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~ 42 (207)
..|+.+-.... .+..+|.+|.++++-++ . ....+.+++++
T Consensus 124 I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~ 169 (457)
T cd07108 124 ILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQ 169 (457)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH
Confidence 34666555444 36788999999999763 2 34455555554
No 297
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=23.33 E-value=2.5e+02 Score=23.70 Aligned_cols=45 Identities=13% Similarity=0.107 Sum_probs=35.9
Q ss_pred HHHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHH
Q psy9665 12 LLLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVV 56 (207)
Q Consensus 12 ~~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 56 (207)
...+++++..|+..+..+ .+.++.+...+++.+++.+...+....
T Consensus 64 ~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~ 109 (515)
T TIGR03098 64 VTAMFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLD 109 (515)
T ss_pred HHHHHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhh
Confidence 345788899999988877 578999999999999998877655443
No 298
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=23.19 E-value=2.6e+02 Score=23.53 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=35.5
Q ss_pred HHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHH
Q psy9665 13 LLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVV 56 (207)
Q Consensus 13 ~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 56 (207)
..+++++..|+..+..+ .+.+..+.+.+++.++..+...+....
T Consensus 70 ~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~ 114 (513)
T PRK07656 70 IAALGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLG 114 (513)
T ss_pred HHHHHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHH
Confidence 35778899999999887 567888999999999999877665443
No 299
>PRK14717 putative glycine/sarcosine/betaine reductase complex protein A; Provisional
Probab=23.16 E-value=1e+02 Score=20.24 Aligned_cols=51 Identities=8% Similarity=0.154 Sum_probs=28.9
Q ss_pred HHHHHHHHHHhCCCcCcceeccccccccceeeccCC-CCCCCccccccCCceEE
Q psy9665 84 KSTLDQVGERLGLSMDSMKQGYGMTELTILVTFSDL-DVPSSSVGKVMPSMKMK 136 (207)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~-~~~~~~~G~~~~~~~~~ 136 (207)
+.-.+.+.+.+|.. .++-..|.+|+-...+.... .....+.--|+.|+++.
T Consensus 6 Q~rvk~~aek~g~e--NvvV~lG~aeaEaaglaAETVt~GDPTfAGPLaGV~Lg 57 (107)
T PRK14717 6 QKRIKELAEKYGAE--NIVVILGAAEAEAAGLAAETVTNGDPTFAGPLAGVQLG 57 (107)
T ss_pred HHHHHHHHHhcCCc--cEEEEecCcchhhccceeeeeccCCCccccccccCccC
Confidence 34456677788887 78888898876433333222 11122233367776643
No 300
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=23.11 E-value=4.6e+02 Score=22.13 Aligned_cols=59 Identities=19% Similarity=0.216 Sum_probs=33.4
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-CCH----HHHHHHHHhc--CceEeeccH---HHHHHHHhC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-FDG----HLFLSSIEKY--RVTLLPAVP---PLVVFLAKS 61 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~~----~~~~~~i~~~--~~t~~~~~P---~~~~~l~~~ 61 (207)
..|.++-..+. .+..+|.+|.++++-+. ..| ..+.+++++. ...++..++ ..-..|+.+
T Consensus 117 i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~ 187 (443)
T cd07152 117 ISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPGGADAGEALVED 187 (443)
T ss_pred ECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecCChHHHHHHhcC
Confidence 34566555443 47788999999999773 232 3445667664 233333332 344445544
No 301
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=23.11 E-value=35 Score=32.52 Aligned_cols=40 Identities=8% Similarity=-0.031 Sum_probs=28.5
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPP 53 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 53 (207)
.+++++..|+..+..+ ...++.+...+++.+++.+...+.
T Consensus 698 ~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~ 738 (1140)
T PRK06814 698 TFFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRA 738 (1140)
T ss_pred HHHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHH
Confidence 4677777787766665 467778888888888887766543
No 302
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=22.97 E-value=4.7e+02 Score=22.11 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=27.3
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|+.+-.-.. .+..+|..|.++++-++ . ....+.+++++.
T Consensus 124 i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~a 170 (451)
T cd07103 124 ITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEA 170 (451)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHc
Confidence 34655554332 37788999999999873 2 345667777764
No 303
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.86 E-value=2.5e+02 Score=24.01 Aligned_cols=46 Identities=7% Similarity=-0.047 Sum_probs=37.0
Q ss_pred HHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 13 LLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 13 ~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
..+++++..|+..+..+ ...+..+...+++.+++.+...+.....+
T Consensus 76 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 122 (546)
T PRK08314 76 IAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKV 122 (546)
T ss_pred HHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhH
Confidence 35888899999999887 56888999999999999988776655443
No 304
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=22.77 E-value=3.2e+02 Score=23.17 Aligned_cols=47 Identities=17% Similarity=0.100 Sum_probs=36.8
Q ss_pred HHHH-HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHH
Q psy9665 10 YGLL-LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVV 56 (207)
Q Consensus 10 ~g~~-~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 56 (207)
..+. .+++++..|+..+.++ .+++..+...+++.+++.+........
T Consensus 66 ~~~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~ 114 (508)
T TIGR02262 66 VDFPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLP 114 (508)
T ss_pred HHHHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHH
Confidence 3444 4778899999988876 578999999999999999877665443
No 305
>PRK08316 acyl-CoA synthetase; Validated
Probab=22.69 E-value=2.8e+02 Score=23.47 Aligned_cols=46 Identities=15% Similarity=0.105 Sum_probs=36.9
Q ss_pred HHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 13 LLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 13 ~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
..+++++..|+..+..+ .+.++.+...+++.++..++........+
T Consensus 76 ~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~ 122 (523)
T PRK08316 76 LLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTA 122 (523)
T ss_pred HHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHH
Confidence 45888899999998887 56888899999999999987776655444
No 306
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=22.65 E-value=2.4e+02 Score=24.57 Aligned_cols=42 Identities=12% Similarity=0.083 Sum_probs=28.4
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR 44 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~ 44 (207)
..|+++-..+. -+..+|.+|.++++-++ ..+..+.+++.+..
T Consensus 151 I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG 198 (513)
T cd07128 151 INAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESG 198 (513)
T ss_pred ECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhC
Confidence 35666555443 37788999999999773 24566777777743
No 307
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=22.59 E-value=4.1e+02 Score=22.47 Aligned_cols=41 Identities=22% Similarity=0.468 Sum_probs=26.1
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhc
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKY 43 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~ 43 (207)
..|.++-..+. .+..+|.+|.++++-++ . .+..+.+++++.
T Consensus 108 I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a 154 (434)
T cd07133 108 IVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY 154 (434)
T ss_pred EcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh
Confidence 45666654333 37788999999999773 3 344556666553
No 308
>PRK13388 acyl-CoA synthetase; Provisional
Probab=22.50 E-value=2.9e+02 Score=23.80 Aligned_cols=43 Identities=19% Similarity=0.061 Sum_probs=34.6
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVV 56 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 56 (207)
.+++++..|+..+.++ .+..+.+...+++.++..+........
T Consensus 68 ~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~ 111 (540)
T PRK13388 68 WLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRP 111 (540)
T ss_pred HHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhH
Confidence 5778899999999876 567888999999999998887655443
No 309
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=22.44 E-value=44 Score=28.92 Aligned_cols=39 Identities=3% Similarity=-0.011 Sum_probs=29.3
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP 52 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P 52 (207)
.+++++..|+..+..+ .+..+.+...+++.+++.+...+
T Consensus 90 ~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~ 129 (563)
T PRK06710 90 GYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLD 129 (563)
T ss_pred HHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEec
Confidence 5778888888877765 56778888888888887776544
No 310
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=22.43 E-value=4.3e+02 Score=22.48 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=34.2
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC-----ceEeecc-HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR-----VTLLPAV-PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~-----~t~~~~~-P~~~~~l~~~~ 62 (207)
..|.++-..+. .+..+|.+|.++++-++ . ....+.+++++.. ++++.+. ...-..|++++
T Consensus 127 I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~~ 198 (451)
T cd07146 127 ITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITHP 198 (451)
T ss_pred EccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCC
Confidence 34555544433 36788999999999763 3 3455666666642 2233332 23455566554
No 311
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=22.33 E-value=2.7e+02 Score=25.24 Aligned_cols=42 Identities=12% Similarity=0.032 Sum_probs=28.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC----CCHHHHHHHHHhcC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH----FDGHLFLSSIEKYR 44 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~ 44 (207)
..|+++-..+. -+..+|.+|.++++-|+ ..+..+.+++.+..
T Consensus 155 I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG 202 (675)
T PRK11563 155 INAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESG 202 (675)
T ss_pred ECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcC
Confidence 45666655544 37788999999999763 34566777777743
No 312
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=22.23 E-value=5.3e+02 Score=22.47 Aligned_cols=28 Identities=18% Similarity=0.095 Sum_probs=19.9
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH 30 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~ 30 (207)
..|+++-..+. -+..+|.+|.++++-++
T Consensus 161 I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs 190 (508)
T PLN02315 161 ITAFNFPCAVLGWNACIALVCGNCVVWKGA 190 (508)
T ss_pred ECCCcchHHHHHHHHhHHHHcCCEEEeeCC
Confidence 45666654443 37788999999999773
No 313
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=22.11 E-value=43 Score=28.27 Aligned_cols=38 Identities=16% Similarity=0.104 Sum_probs=26.8
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeecc
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAV 51 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~ 51 (207)
.+++++..|+..+..+ .+.++.+...+++.++..+...
T Consensus 68 ~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (503)
T PRK04813 68 TFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIAT 106 (503)
T ss_pred HHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEec
Confidence 4667777888777666 4566777777787777776653
No 314
>PLN03102 acyl-activating enzyme; Provisional
Probab=22.10 E-value=2.6e+02 Score=24.40 Aligned_cols=42 Identities=7% Similarity=0.053 Sum_probs=35.0
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLV 55 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~ 55 (207)
.+++++..|++++... .+.++.+...+++.+++++...+...
T Consensus 80 ~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (579)
T PLN03102 80 MHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFE 122 (579)
T ss_pred HHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhH
Confidence 5778899999988876 67899999999999999988765544
No 315
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=22.05 E-value=2.9e+02 Score=23.52 Aligned_cols=60 Identities=18% Similarity=0.146 Sum_probs=33.6
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-CC---HHHHHHHHH----hc--C---ceEeecc-HHHHHHHHhCC
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-FD---GHLFLSSIE----KY--R---VTLLPAV-PPLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~~---~~~~~~~i~----~~--~---~t~~~~~-P~~~~~l~~~~ 62 (207)
..|.+|-.... .+..+|.+|.++++-++ .. ...+.++++ +. . ++++.+. ....+.|++++
T Consensus 102 I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~ 177 (436)
T cd07122 102 LIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELMKHP 177 (436)
T ss_pred EeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHHcCC
Confidence 34555554443 37788999999999773 32 334455554 22 2 3333332 34556676664
No 316
>PRK07798 acyl-CoA synthetase; Validated
Probab=22.01 E-value=3.1e+02 Score=23.24 Aligned_cols=45 Identities=11% Similarity=-0.014 Sum_probs=35.3
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
.+++++..|+..+..+ .+.++.+...+++.++..++........+
T Consensus 69 ~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 114 (533)
T PRK07798 69 AMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRV 114 (533)
T ss_pred HHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHH
Confidence 4778899999999887 56788899999999999887766544333
No 317
>PRK06164 acyl-CoA synthetase; Validated
Probab=21.91 E-value=43 Score=28.72 Aligned_cols=40 Identities=15% Similarity=0.268 Sum_probs=31.0
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPP 53 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~ 53 (207)
.+++++..|+..+..+ ....+.+...+++.+++.+...+.
T Consensus 76 ~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 76 LFLACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred HHHHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccc
Confidence 5778888899988887 456788888888888888765443
No 318
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=21.76 E-value=4.7e+02 Score=22.80 Aligned_cols=60 Identities=17% Similarity=0.066 Sum_probs=32.0
Q ss_pred ccccchHHHHHH-HHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcCc--e---EeeccH-HHHHHHHhCC
Q psy9665 3 LVPFFHGYGLLL-MLQAICMNNKLVVLPH-F---DGHLFLSSIEKYRV--T---LLPAVP-PLVVFLAKSP 62 (207)
Q Consensus 3 ~~Pl~h~~g~~~-~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~~--t---~~~~~P-~~~~~l~~~~ 62 (207)
..|+++-.-+.. .+.+.++|.++++-|+ . .+..+.+++++... . ++.+.. ..-..|+.++
T Consensus 177 I~PwNfP~~~~~~~~~palaGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~~ 247 (522)
T cd07123 177 VSPFNFTAIGGNLAGAPALMGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTVLASP 247 (522)
T ss_pred ECCcccHHHHHHHHHHHHHhCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCC
Confidence 456665543332 3333337999988762 2 45566777776522 3 333322 2445566654
No 319
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=21.74 E-value=3.3e+02 Score=23.09 Aligned_cols=43 Identities=7% Similarity=-0.012 Sum_probs=35.2
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVV 56 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~ 56 (207)
.+++++..|+..+..+ .+.++.+...+++.+++.++..+....
T Consensus 78 ~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 121 (517)
T PRK08008 78 CWFGLAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYP 121 (517)
T ss_pred HHHHHHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhH
Confidence 5778899999988876 578999999999999999887765443
No 320
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=21.69 E-value=2.5e+02 Score=25.39 Aligned_cols=50 Identities=10% Similarity=-0.035 Sum_probs=32.0
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHhcC---ceEeeccH
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEKYR---VTLLPAVP 52 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~~~---~t~~~~~P 52 (207)
..|+++-.-+. -+..+|..|.++++-|+ . .+..+.+++.+.. ..++..++
T Consensus 151 I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~ 209 (663)
T TIGR02278 151 INAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLIC 209 (663)
T ss_pred EcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEe
Confidence 45666665544 37788999999998763 3 3456677777743 33444443
No 321
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=21.37 E-value=41 Score=28.93 Aligned_cols=35 Identities=9% Similarity=-0.018 Sum_probs=13.9
Q ss_pred HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEee
Q psy9665 15 MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLP 49 (207)
Q Consensus 15 ~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~ 49 (207)
+++++..|+..+... +.....+...+++.++..+.
T Consensus 90 ~la~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li 125 (536)
T PRK10946 90 FFALLKLGVAPVNALFSHQRSELNAYASQIEPALLI 125 (536)
T ss_pred HHHHHHcCeEEecCCccccHHHHHHHHhhcCCCEEE
Confidence 445555554322111 12233344444444444443
No 322
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=21.29 E-value=3.1e+02 Score=23.11 Aligned_cols=45 Identities=4% Similarity=-0.043 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHH
Q psy9665 13 LLMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVF 57 (207)
Q Consensus 13 ~~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 57 (207)
..+++++..|+..+..+ .+.+..+...+++.++..+.........
T Consensus 71 ~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~ 116 (521)
T PRK06187 71 EAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPL 116 (521)
T ss_pred HHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHH
Confidence 35888899999998887 5678889999999999888776655443
No 323
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=21.24 E-value=39 Score=29.17 Aligned_cols=39 Identities=15% Similarity=0.065 Sum_probs=30.1
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP 52 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P 52 (207)
.+++++..|+..+... .+.++.+...+++.+++.+....
T Consensus 96 ~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~ 135 (547)
T PRK13295 96 LYLACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPK 135 (547)
T ss_pred HHHHHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEec
Confidence 5778888899888776 56788888888888888776543
No 324
>TIGR02082 metH 5-methyltetrahydrofolate--homocysteine methyltransferase. S-methyltransferase (MetE, EC 2.1.1.14, the cobalamin-independent methionine synthase) and betaine-homocysteine methyltransferase.
Probab=21.21 E-value=2.7e+02 Score=27.22 Aligned_cols=81 Identities=12% Similarity=0.153 Sum_probs=49.0
Q ss_pred chHHHHHH-HHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH---HHHHHHHhCCC-CCCCCCCceeEEEEccC
Q psy9665 7 FHGYGLLL-MLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP---PLVVFLAKSPL-VDQYDLSSLTNIRCGAA 80 (207)
Q Consensus 7 ~h~~g~~~-~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P---~~~~~l~~~~~-~~~~~l~~lr~~~~~G~ 80 (207)
.|.-|... -...-..|-.++.+. ...++.+.+.++++++.++..+- +....+.+..+ ..+..+ +++ +++||+
T Consensus 744 vHDIGKnIV~~~L~~~GfeVIdLG~dVp~e~iv~aa~e~~~diVgLS~Lmt~t~~~m~~vi~~L~~~g~-~v~-v~vGGa 821 (1178)
T TIGR02082 744 VHDIGKNIVGVVLSCNGYEVVDLGVMVPIEKILEAAKDHNADVIGLSGLITPSLDEMKEVAEEMNRRGI-TIP-LLIGGA 821 (1178)
T ss_pred ccHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHhCCCEEEEcCcccccHHHHHHHHHHHHhcCC-Cce-EEEecc
Confidence 37777654 333345577888777 57899999999999999865432 22222211110 011111 233 788999
Q ss_pred CCCHHHHHH
Q psy9665 81 PVGKSTLDQ 89 (207)
Q Consensus 81 ~~~~~~~~~ 89 (207)
+++++..+.
T Consensus 822 ~~s~~~~~~ 830 (1178)
T TIGR02082 822 ATSKTHTAV 830 (1178)
T ss_pred ccchhHHHh
Confidence 998877654
No 325
>TIGR02483 PFK_mixed phosphofructokinase. Members of this family that are characterized, save one, are phosphofructokinases dependent on pyrophosphate (EC 2.7.1.90) rather than ATP (EC 2.7.1.11). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.
Probab=21.16 E-value=1.7e+02 Score=23.76 Aligned_cols=34 Identities=15% Similarity=0.317 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHHh
Q psy9665 9 GYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIEK 42 (207)
Q Consensus 9 ~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~~ 42 (207)
..|++.+.+++..|+.+++.| +++.+.+.+.+++
T Consensus 173 ~~G~LAl~~ala~~a~~iliPE~~~~~~~l~~~v~~ 208 (324)
T TIGR02483 173 HAGWIALHSGIAGGADVILIPEIPFDIDSVCEKVRE 208 (324)
T ss_pred ChhHHHHHHHhccCCCEEEecCCCCCHHHHHHHHHH
Confidence 457777888899999999988 6788888777643
No 326
>PRK03202 6-phosphofructokinase; Provisional
Probab=20.99 E-value=1.9e+02 Score=23.46 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHHHhCCeEEEeC--CCCHHHHHHHHH
Q psy9665 8 HGYGLLLMLQAICMNNKLVVLP--HFDGHLFLSSIE 41 (207)
Q Consensus 8 h~~g~~~~~~~l~~G~~~v~~~--~~~~~~~~~~i~ 41 (207)
...|++.+.+++..|+.+++.| +++.+.+.+.+.
T Consensus 171 R~~G~LAl~~ala~~a~~iliPE~~~~~~~l~~~i~ 206 (320)
T PRK03202 171 RHAGDLALHAGIAGGAEVILIPEVPFDIEELCAKIK 206 (320)
T ss_pred CChHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHH
Confidence 3467778888999999999988 678888877663
No 327
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=20.86 E-value=4.4e+02 Score=22.31 Aligned_cols=40 Identities=18% Similarity=0.364 Sum_probs=24.7
Q ss_pred ccccchHHHHH--HHHHHHHhCCeEEEeCC-C---CHHHHHHHHHh
Q psy9665 3 LVPFFHGYGLL--LMLQAICMNNKLVVLPH-F---DGHLFLSSIEK 42 (207)
Q Consensus 3 ~~Pl~h~~g~~--~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~~ 42 (207)
..|.++-.... .+..+|.+|.++++-++ . .+..+.+++++
T Consensus 107 i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~ 152 (433)
T cd07134 107 ISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE 152 (433)
T ss_pred EcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 34555544433 36688999999999773 2 33445555555
No 328
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=20.84 E-value=1.5e+02 Score=21.40 Aligned_cols=70 Identities=9% Similarity=-0.109 Sum_probs=32.9
Q ss_pred hCCeEEEeCCCCHHHHHHHHHhcCceEeeccHHHHHHHHhCCCCCCCCCCceeEEEEccCCC-CHHHHHHHHHHhCC
Q psy9665 21 MNNKLVVLPHFDGHLFLSSIEKYRVTLLPAVPPLVVFLAKSPLVDQYDLSSLTNIRCGAAPV-GKSTLDQVGERLGL 96 (207)
Q Consensus 21 ~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~~G~~~-~~~~~~~~~~~~~~ 96 (207)
..+.+++++......+++.+ ..++..-..-+.++..+++.... ...+..+.||.+- ..+..+.+++.+|.
T Consensus 4 ~~adlv~~DG~~i~~~~~~~-g~~~~~rv~g~dl~~~l~~~~~~-----~~~~ifllG~~~~~~~~~~~~l~~~yP~ 74 (172)
T PF03808_consen 4 NSADLVLPDGMPIVWAARLL-GRPLPERVTGSDLFPDLLRRAEQ-----RGKRIFLLGGSEEVLEKAAANLRRRYPG 74 (172)
T ss_pred HhCCEEecCCHHHHHHHHHc-CCCCCcccCHHHHHHHHHHHHHH-----cCCeEEEEeCCHHHHHHHHHHHHHHCCC
Confidence 44555555544444444444 44443333344555555554322 2345566666432 23344455555543
No 329
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=20.73 E-value=5.9e+02 Score=22.82 Aligned_cols=46 Identities=9% Similarity=-0.077 Sum_probs=36.7
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFLA 59 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 59 (207)
..++++..|+..+-.. .+.++.+..++++.++++++.....+..++
T Consensus 117 ~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 117 AMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred HHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 4778899999888776 678999999999999999988765444443
No 330
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=20.63 E-value=5.4e+02 Score=21.94 Aligned_cols=49 Identities=24% Similarity=0.220 Sum_probs=28.4
Q ss_pred HHHHHHHhCCeEEEeCC-C---CHHHHHHHHH----hc-----CceEeec-cHHHHHHHHhCC
Q psy9665 14 LMLQAICMNNKLVVLPH-F---DGHLFLSSIE----KY-----RVTLLPA-VPPLVVFLAKSP 62 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~~-~---~~~~~~~~i~----~~-----~~t~~~~-~P~~~~~l~~~~ 62 (207)
.+..+|..|.++++-++ . ....+.+++. +. -++++.+ .+.....|++++
T Consensus 127 ~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~ 189 (454)
T cd07129 127 DTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHP 189 (454)
T ss_pred hHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCC
Confidence 46678999999999773 2 3344444443 32 2334444 234566676654
No 331
>PRK06839 acyl-CoA synthetase; Validated
Probab=20.59 E-value=3.8e+02 Score=22.45 Aligned_cols=45 Identities=11% Similarity=0.085 Sum_probs=36.5
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccHHHHHHH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVPPLVVFL 58 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 58 (207)
.+++++..|+..+..+ ..++..+...+++.+++.+...+.....+
T Consensus 69 ~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 69 LLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred HHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 5778888999988887 57888898999999999988877665443
No 332
>PRK06145 acyl-CoA synthetase; Validated
Probab=20.49 E-value=49 Score=27.96 Aligned_cols=39 Identities=10% Similarity=0.069 Sum_probs=29.4
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP 52 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P 52 (207)
.+++++..|+..+..+ .+.++.+...+++.++..+...+
T Consensus 68 ~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~ 107 (497)
T PRK06145 68 LAFAASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDE 107 (497)
T ss_pred HHHHHHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEcc
Confidence 4778888888888776 56788888888888888766543
No 333
>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length. Members of this family appear to be Actinomycete specific. The function of this family is unknown.
Probab=20.46 E-value=98 Score=19.71 Aligned_cols=19 Identities=16% Similarity=0.151 Sum_probs=15.9
Q ss_pred ccccccCCceEEEEeCCCC
Q psy9665 125 SVGKVMPSMKMKVLVKSHT 143 (207)
Q Consensus 125 ~~G~~~~~~~~~i~d~~~~ 143 (207)
.-|.|+++.-++++|..|+
T Consensus 16 ~~G~Pv~gAyVRLLD~sgE 34 (85)
T PF07210_consen 16 RDGEPVGGAYVRLLDSSGE 34 (85)
T ss_pred cCCcCCCCeEEEEEcCCCC
Confidence 3578999999999998865
No 334
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=20.35 E-value=44 Score=28.98 Aligned_cols=39 Identities=8% Similarity=0.003 Sum_probs=30.5
Q ss_pred HHHHHHHhCCeEEEeC-CCCHHHHHHHHHhcCceEeeccH
Q psy9665 14 LMLQAICMNNKLVVLP-HFDGHLFLSSIEKYRVTLLPAVP 52 (207)
Q Consensus 14 ~~~~~l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P 52 (207)
.+++++..|+..+... .+....+...+++.++..+...+
T Consensus 91 ~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~ 130 (562)
T PRK12492 91 AVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLN 130 (562)
T ss_pred HHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEEEecc
Confidence 5778888898888776 56788888888888888776543
No 335
>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A.
Probab=20.26 E-value=86 Score=19.00 Aligned_cols=18 Identities=11% Similarity=0.263 Sum_probs=12.0
Q ss_pred cccccCCceEEEEeCCCC
Q psy9665 126 VGKVMPSMKMKVLVKSHT 143 (207)
Q Consensus 126 ~G~~~~~~~~~i~d~~~~ 143 (207)
-|.|++++.+.+.+.++.
T Consensus 10 ~g~pv~~a~V~l~~~~~~ 27 (82)
T PF13620_consen 10 TGQPVPGATVTLTDQDGG 27 (82)
T ss_dssp TSCBHTT-EEEET--TTT
T ss_pred CCCCcCCEEEEEEEeeCC
Confidence 578999999999876554
No 336
>cd01733 LSm10 The eukaryotic Sm and Sm-like (LSm) proteins associate with RNA to form the core domain of the ribonucleoprotein particles involved in a variety of RNA processing events including pre-mRNA splicing, telomere replication, and mRNA degradation. Members of this family share a highly conserved Sm fold containing an N-terminal helix followed by a strongly bent five-stranded antiparallel beta-sheet. LSm10 is an SmD1-like protein which is thought to bind U7 snRNA along with LSm11 and five other Sm subunits to form a 7-member ring structure. LSm10 and the U7 snRNP of which it is a part are thought to play an important role in histone mRNA 3' processing.
Probab=20.18 E-value=1.4e+02 Score=18.62 Aligned_cols=22 Identities=9% Similarity=0.321 Sum_probs=15.3
Q ss_pred EEEeCCCCCCCcceEEEEcCee
Q psy9665 136 KVLVKSHTMGSQDSFVISGDEI 157 (207)
Q Consensus 136 ~i~d~~~~~g~~Gel~i~g~~~ 157 (207)
.+.+.++.+...|++.|||..+
T Consensus 51 ~~~~~~~~~~~~~~v~IRG~nI 72 (78)
T cd01733 51 TIIDRNGKQVQVEEIMVTGRNI 72 (78)
T ss_pred EEEcCCCceeECCcEEEECCEE
Confidence 3445555555679999999876
Done!