RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9665
         (207 letters)



>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica
           [TaxId: 28901]}
          Length = 643

 Score = 90.9 bits (225), Expect = 6e-22
 Identities = 16/148 (10%), Positives = 46/148 (31%), Gaps = 10/148 (6%)

Query: 1   MALVPFFHGYGL-LLMLQAICMNNKLVVLP----HFDGHLFLSSIEKYRVTLLPAVPPLV 55
                     G   L+   +      ++                ++K++V +L   P  +
Sbjct: 298 WCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAI 357

Query: 56  VFLAKSP--LVDQYDLSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTIL 113
             L       ++  D SSL  +     P+     +   +++G     +   +  TE    
Sbjct: 358 RALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGF 417

Query: 114 VTFS---DLDVPSSSVGKVMPSMKMKVL 138
           +       +++ + S  +    ++  ++
Sbjct: 418 MITPLPGAIELKAGSATRPFFGVQPALV 445


>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 640

 Score = 69.5 bits (169), Expect = 1e-14
 Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 11/149 (7%)

Query: 1   MALVPFFHGYGLLLMLQAICMNNKLVVLP-----HFDGHLFLSSIEKYRVTLLPAVPPLV 55
                     G   ++    +     ++      + +   +   I++++VT     P  +
Sbjct: 285 FTAGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTAL 344

Query: 56  VFLAKSP--LVDQYDLSSLTNIRCGAAPVGKSTLDQVGERLGLSMDSMKQGYGMTELTIL 113
             L ++    ++ + L SL  +     P+     +   E++G +   +   Y  TE    
Sbjct: 345 RLLKRAGDSYIENHSLKSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSH 404

Query: 114 VTFS----DLDVPSSSVGKVMPSMKMKVL 138
           +          +   S       +   VL
Sbjct: 405 LVTPLAGGVTPMKPGSASFPFFGIDAVVL 433


>d2in5a1 b.177.1.1 (A:3-200) Hypothetical lipoprotein YmcC
           {Escherichia coli [TaxId: 562]}
          Length = 198

 Score = 28.4 bits (63), Expect = 0.47
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 10/61 (16%)

Query: 148 DSFVISGDEIQFAPYCR-KMSLGAYLCHWLKLKGKQTVLVLGFGSQSCEENLGADNISLI 206
               ++  +IQ  PY    + L          +G++  +VLG+  Q   + L  DN  L+
Sbjct: 18  QDITVADQQIQALPYSTMYLRLN---------EGQRIFVVLGYIEQEQSKWLSQDNAMLV 68

Query: 207 S 207
           +
Sbjct: 69  T 69


>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
           KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 288

 Score = 27.2 bits (58), Expect = 1.5
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 18  AICMNNKLVVLPHFDGHLFLSSIEKY 43
                 ++ VL  +DGH FL S+E Y
Sbjct: 238 ITVHQGRIYVLGGYDGHTFLDSVECY 263


>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase
           (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}
          Length = 226

 Score = 26.0 bits (57), Expect = 3.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)

Query: 178 LKGKQTVLVLGFGSQ 192
            KG + + V+G+GSQ
Sbjct: 41  FKGIKQIGVIGWGSQ 55


>d1bwva1 c.1.14.1 (A:150-478) Ribulose 1,5-bisphosphate
           carboxylase-oxygenase {Galdieria partita [TaxId: 83374]}
          Length = 328

 Score = 25.9 bits (57), Expect = 3.3
 Identities = 6/41 (14%), Positives = 17/41 (41%)

Query: 3   LVPFFHGYGLLLMLQAICMNNKLVVLPHFDGHLFLSSIEKY 43
           ++    GY  +  +     +N +++  H  G+   S  + +
Sbjct: 117 MIDLVIGYTAIQTMAKWARDNDMILHLHRAGNSTYSRQKNH 157


>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol
           dehydrogenase) {Silverleaf whitefly (Bemisia
           argentifolii) [TaxId: 77855]}
          Length = 178

 Score = 25.0 bits (53), Expect = 6.6
 Identities = 5/34 (14%), Positives = 11/34 (32%)

Query: 155 DEIQFAPYCRKMSLGAYLCHWLKLKGKQTVLVLG 188
           +  Q   +  K+          + K   T+ V+ 
Sbjct: 141 NVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMI 174


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.138    0.406 

Gapped
Lambda     K      H
   0.267   0.0568    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 729,962
Number of extensions: 31178
Number of successful extensions: 68
Number of sequences better than 10.0: 1
Number of HSP's gapped: 66
Number of HSP's successfully gapped: 7
Length of query: 207
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 126
Effective length of database: 1,295,466
Effective search space: 163228716
Effective search space used: 163228716
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.8 bits)