BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9673
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BZT2|SH3R2_MOUSE Putative E3 ubiquitin-protein ligase SH3RF2 OS=Mus musculus
GN=Sh3rf2 PE=1 SV=2
Length = 735
Score = 135 bits (339), Expect = 2e-31, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 53/172 (30%)
Query: 11 ECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKVDELPPNVLLM 70
EC VC ++LD ++KVLPCQHTFCK CL+ I +HKELRCPECR LV C ++ LP N+LL+
Sbjct: 11 ECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPECRTLVFCSIEALPANLLLV 70
Query: 71 RILEGL-------------------------------------FPLVVSFIRFFL----- 88
R+L+G+ F LV S +R +
Sbjct: 71 RLLDGVRSGQSSWKGGSFRRPRILTLQDNRKAKSSPRSLQASPFRLVPS-VRIHMDGVPR 129
Query: 89 ----------NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N DL F K D+++LRR++D NW+ GE+NG +G FP S V++
Sbjct: 130 AKALCNYRGKNPGDLKFNKGDVILLRRQLDENWYQGEINGVSGIFPASSVEV 181
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
L F KDD++ + ++D NW G++ G FP+ +V+
Sbjct: 212 LTFLKDDVITVISRVDENWAEGKLGDKVGIFPILFVE 248
>sp|Q8C120|SH3R3_MOUSE SH3 domain-containing RING finger protein 3 OS=Mus musculus
GN=Sh3rf3 PE=2 SV=2
Length = 878
Score = 131 bits (330), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/76 (72%), Positives = 67/76 (88%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE +L DLLECSVCL+RLDT++KVLPCQHTFC++CLE IV S ELRCPECR+LV C V
Sbjct: 41 MDESSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLESIVCSRHELRCPECRILVGCGV 100
Query: 61 DELPPNVLLMRILEGL 76
DELP N+LL+R+L+G+
Sbjct: 101 DELPANILLVRLLDGI 116
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ---------------------- 129
DL F K DI+ILRRK+D NW++GE+ G G P SY+Q
Sbjct: 205 DLKFNKGDIIILRRKVDENWYHGELQGMHGFLPASYIQCVRPLPQALPQGKALYDFEMKD 264
Query: 130 ---------------------IDNNWFYGEVNGTTGAFPMSYVQF 153
+D+NW G + G FP+ YV+
Sbjct: 265 RDQDKDCLTFTKDEVLTVIRRVDDNWAEGMLGDKIGIFPLLYVEL 309
Score = 40.8 bits (94), Expect = 0.004, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 28/41 (68%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDNN 133
L F KD+++ + R++D+NW G + G FP+ YV+++++
Sbjct: 272 LTFTKDEVLTVIRRVDDNWAEGMLGDKIGIFPLLYVELNDS 312
Score = 37.0 bits (84), Expect = 0.052, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
++ K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 837 EIELKEGDIVFVHKKHEDGWFKGTLQRNGRTGLFPGSFVE 876
>sp|Q8TEJ3|SH3R3_HUMAN SH3 domain-containing RING finger protein 3 OS=Homo sapiens
GN=SH3RF3 PE=1 SV=2
Length = 882
Score = 131 bits (330), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/76 (72%), Positives = 67/76 (88%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE +L DLLECSVCL+RLDT++KVLPCQHTFC++CLE IV S ELRCPECR+LV C V
Sbjct: 46 MDESSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLESIVCSRHELRCPECRILVGCGV 105
Query: 61 DELPPNVLLMRILEGL 76
DELP N+LL+R+L+G+
Sbjct: 106 DELPANILLVRLLDGI 121
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 42/105 (40%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ---------------------- 129
DL F K DI++LRRK+D W++GE++GT G P SY+Q
Sbjct: 212 DLKFNKGDIIVLRRKVDEQWYHGELHGTQGFLPASYIQCIQPLPHAPPQGKALYDFEMKD 271
Query: 130 ---------------------IDNNWFYGEVNGTTGAFPMSYVQF 153
+D NW G + G FP+ YV+
Sbjct: 272 KDQDKDCLTFTKDEILTVLRRVDENWAEGMLGDKIGIFPLLYVEL 316
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDNN 133
L F KD+I+ + R++D NW G + G FP+ YV+++++
Sbjct: 279 LTFTKDEILTVLRRVDENWAEGMLGDKIGIFPLLYVELNDS 319
Score = 35.8 bits (81), Expect = 0.12, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
++ K+ DIV + +K ++ W+ G + NG TG FP S+V+
Sbjct: 841 EIELKEGDIVFVHKKREDGWYKGTLQRNGRTGLFPGSFVE 880
>sp|Q6NRD3|SH3R1_XENLA E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus laevis GN=sh3rf1
PE=2 SV=1
Length = 826
Score = 131 bits (329), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/76 (75%), Positives = 65/76 (85%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD S+KVLPCQHTFCK+CL IVSS KELRCPECR LVEC V
Sbjct: 1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRKELRCPECRTLVECGV 60
Query: 61 DELPPNVLLMRILEGL 76
DELP N+LL+R+L+G+
Sbjct: 61 DELPSNILLVRLLDGI 76
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI--------------------- 130
DL F K DI++LRR++D NW++GE+NG G FP ++VQI
Sbjct: 150 DLKFNKGDIIVLRRQVDENWYHGEINGIHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKD 209
Query: 131 ----------------------DNNWFYGEVNGTTGAFPMSYVQF 153
D NW G + G FP+SYV+F
Sbjct: 210 KEADKDCLPFLKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEF 254
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDDI+ + R++D NW G + G FP+SYV+ ++
Sbjct: 217 LPFLKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEFNS 256
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 785 ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 824
>sp|Q28E95|SH3R1_XENTR E3 ubiquitin-protein ligase SH3RF1 OS=Xenopus tropicalis
GN=sh3rf1 PE=2 SV=1
Length = 861
Score = 129 bits (323), Expect = 9e-30, Method: Composition-based stats.
Identities = 56/76 (73%), Positives = 64/76 (84%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD S+KVLPCQHTFCK+CL IVSS ELRCPECR LVEC V
Sbjct: 1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVSSRNELRCPECRTLVECGV 60
Query: 61 DELPPNVLLMRILEGL 76
DELP N+LL+R+L+G+
Sbjct: 61 DELPSNILLVRLLDGI 76
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI--------------------- 130
DL F K DI++LRR++D NW++GE+NG G FP ++VQI
Sbjct: 150 DLKFNKGDIIVLRRQVDENWYHGEINGIHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKD 209
Query: 131 ----------------------DNNWFYGEVNGTTGAFPMSYVQF 153
D NW G + G FP+SYV+F
Sbjct: 210 KEADKDCLPFLKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEF 254
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDDI+ + R++D NW G + G FP+SYV+ ++
Sbjct: 217 LPFLKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEFNS 256
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 820 ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 859
>sp|A5D8S5|SH3R1_DANRE E3 ubiquitin-protein ligase SH3RF1 OS=Danio rerio GN=sh3rf1 PE=2
SV=2
Length = 867
Score = 120 bits (302), Expect = 3e-27, Method: Composition-based stats.
Identities = 52/76 (68%), Positives = 62/76 (81%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD ++KVLPCQHTFC++CL IV S ELRCPECR LVE V
Sbjct: 1 MDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPECRTLVESGV 60
Query: 61 DELPPNVLLMRILEGL 76
DELP N+LL+R+L+G+
Sbjct: 61 DELPSNILLVRLLDGI 76
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ---------------------- 129
DL F K DI+ILRR++D NW++GE+ G G FP ++VQ
Sbjct: 150 DLKFSKGDIIILRRQVDENWYHGEMGGVHGFFPTNFVQVIKPLPQPPPQCKALYDFELKD 209
Query: 130 ---------------------IDNNWFYGEVNGTTGAFPMSYVQF 153
+D NW G + G FP+SYV+F
Sbjct: 210 KEADKDCLPFSKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEF 254
Score = 42.7 bits (99), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDDI+ + R++D NW G + G FP+SYV+ ++
Sbjct: 217 LPFSKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEFNS 256
Score = 37.4 bits (85), Expect = 0.042, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYV 128
+L K+ DIV + +K ++ WF G + NG TG FP S+V
Sbjct: 826 ELELKEGDIVFVHKKREDGWFKGTLQRNGRTGLFPGSFV 864
>sp|Q71F54|SH3R1_RAT E3 ubiquitin-protein ligase SH3RF1 OS=Rattus norvegicus GN=Sh3rf1
PE=1 SV=1
Length = 894
Score = 120 bits (301), Expect = 4e-27, Method: Composition-based stats.
Identities = 53/76 (69%), Positives = 61/76 (80%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD S+KVLPCQHTFCK+CL IV S ELRCPECR LV V
Sbjct: 1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV 60
Query: 61 DELPPNVLLMRILEGL 76
DELP N+LL+R+L+G+
Sbjct: 61 DELPSNILLVRLLDGI 76
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI--------------------- 130
DL F K DI+ILRR++D NW++GEVNG G FP ++VQI
Sbjct: 152 DLKFSKGDIIILRRQVDENWYHGEVNGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKD 211
Query: 131 ----------------------DNNWFYGEVNGTTGAFPMSYVQF 153
D NW G + G FP+SYV+F
Sbjct: 212 KEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEF 256
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDD++ + R++D NW G + G FP+SYV+ ++
Sbjct: 219 LPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNS 258
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 853 ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 892
>sp|Q69ZI1|SH3R1_MOUSE E3 ubiquitin-protein ligase SH3RF1 OS=Mus musculus GN=Sh3rf1 PE=1
SV=2
Length = 892
Score = 120 bits (301), Expect = 4e-27, Method: Composition-based stats.
Identities = 53/76 (69%), Positives = 61/76 (80%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD S+KVLPCQHTFCK+CL IV S ELRCPECR LV V
Sbjct: 1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV 60
Query: 61 DELPPNVLLMRILEGL 76
DELP N+LL+R+L+G+
Sbjct: 61 DELPSNILLVRLLDGI 76
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 45/105 (42%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI--------------------- 130
DL F K DI+ILRR++D NW++GEV+G G FP ++VQI
Sbjct: 152 DLKFSKGDIIILRRQVDENWYHGEVSGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKD 211
Query: 131 ----------------------DNNWFYGEVNGTTGAFPMSYVQF 153
D NW G + G FP+SYV+F
Sbjct: 212 KEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEF 256
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDD++ + R++D NW G + G FP+SYV+ ++
Sbjct: 219 LPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNS 258
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 851 ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 890
>sp|Q5RBR0|SH3R1_PONAB E3 ubiquitin-protein ligase SH3RF1 OS=Pongo abelii GN=SH3RF1 PE=2
SV=1
Length = 888
Score = 118 bits (296), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/76 (68%), Positives = 61/76 (80%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD S+KVLPCQHTFCK+CL IV S ELRCPECR LV V
Sbjct: 1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV 60
Query: 61 DELPPNVLLMRILEGL 76
+ELP N+LL+R+L+G+
Sbjct: 61 EELPSNILLVRLLDGI 76
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI--------------------- 130
DL F K DI+ILRR++D NW++GEVNG G FP ++VQI
Sbjct: 152 DLKFSKGDIIILRRQVDENWYHGEVNGIHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKD 211
Query: 131 ----------------------DNNWFYGEVNGTTGAFPMSYVQF 153
D NW G + G FP+SYV+F
Sbjct: 212 KEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEF 256
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDD++ + R++D NW G + G FP+SYV+ ++
Sbjct: 219 LPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNS 258
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 847 ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 886
>sp|Q7Z6J0|SH3R1_HUMAN E3 ubiquitin-protein ligase SH3RF1 OS=Homo sapiens GN=SH3RF1 PE=1
SV=2
Length = 888
Score = 118 bits (296), Expect = 1e-26, Method: Composition-based stats.
Identities = 52/76 (68%), Positives = 61/76 (80%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD S+KVLPCQHTFCK+CL IV S ELRCPECR LV V
Sbjct: 1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV 60
Query: 61 DELPPNVLLMRILEGL 76
+ELP N+LL+R+L+G+
Sbjct: 61 EELPSNILLVRLLDGI 76
Score = 65.5 bits (158), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 45/105 (42%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI--------------------- 130
DL F K DI+ILRR++D NW++GEVNG G FP ++VQI
Sbjct: 152 DLKFSKGDIIILRRQVDENWYHGEVNGIHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKD 211
Query: 131 ----------------------DNNWFYGEVNGTTGAFPMSYVQF 153
D NW G + G FP+SYV+F
Sbjct: 212 KEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEF 256
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDD++ + R++D NW G + G FP+SYV+ ++
Sbjct: 219 LPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNS 258
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 847 ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 886
>sp|A5D7F8|SH3R1_BOVIN E3 ubiquitin-protein ligase SH3RF1 OS=Bos taurus GN=SH3RF1 PE=2
SV=1
Length = 840
Score = 117 bits (293), Expect = 3e-26, Method: Composition-based stats.
Identities = 51/76 (67%), Positives = 61/76 (80%)
Query: 1 MDEWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
MDE L DLLEC VCL+RLD S+KVLPCQHTFCK+CL IV S ELRCPECR LV V
Sbjct: 1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV 60
Query: 61 DELPPNVLLMRILEGL 76
++LP N+LL+R+L+G+
Sbjct: 61 EQLPSNILLVRLLDGI 76
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 44/105 (41%), Gaps = 43/105 (40%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI--------------------- 130
DL F K DI++LRR++D NW++GEV G G FP ++VQI
Sbjct: 152 DLKFSKGDIIVLRRQVDENWYHGEVGGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKD 211
Query: 131 ----------------------DNNWFYGEVNGTTGAFPMSYVQF 153
D NW G + G FP+SYV+F
Sbjct: 212 KEADKDCLPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEF 256
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
L F KDD++ + R++D NW G + G FP+SYV+ ++
Sbjct: 219 LPFAKDDVLTVIRRVDENWAEGMLADKIGIFPISYVEFNS 258
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L K+ DIV + +K ++ WF G + NG TG FP S+V+
Sbjct: 799 ELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 838
>sp|Q498M5|SH3R2_RAT Putative E3 ubiquitin-protein ligase SH3RF2 OS=Rattus norvegicus
GN=Sh3rf2 PE=2 SV=1
Length = 735
Score = 107 bits (266), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/66 (62%), Positives = 54/66 (81%)
Query: 11 ECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKVDELPPNVLLM 70
EC VC ++LD ++KVLPCQHTFCK CL+ I +HKELRCPECR LV C ++ LP N+LL+
Sbjct: 11 ECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPECRTLVFCSIEALPANLLLV 70
Query: 71 RILEGL 76
R+L+G+
Sbjct: 71 RLLDGV 76
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
L F KDD++ + ++D NW G++ G FP+ +V+
Sbjct: 212 LTFLKDDVITVISRVDENWAEGKLGDKVGIFPILFVE 248
>sp|Q8TEC5|SH3R2_HUMAN Putative E3 ubiquitin-protein ligase SH3RF2 OS=Homo sapiens
GN=SH3RF2 PE=1 SV=3
Length = 729
Score = 99.8 bits (247), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 11 ECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKVDELPPNVLLM 70
EC VC ++LD ++KVLPCQHTFCK CL+ + +HKELRCPECR V ++ LP N+LL+
Sbjct: 11 ECPVCFEKLDVTAKVLPCQHTFCKPCLQRVFKAHKELRCPECRTPVFSNIEALPANLLLV 70
Query: 71 RILEGL 76
R+L+G+
Sbjct: 71 RLLDGV 76
Score = 37.4 bits (85), Expect = 0.039, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 93 LNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
L F KDDI+ + ++D NW G++ G FP+ +V+
Sbjct: 212 LTFLKDDIITVISRVDENWAEGKLGDKVGIFPILFVE 248
>sp|Q03601|NHL1_CAEEL RING finger protein nhl-1 OS=Caenorhabditis elegans GN=nhl-1 PE=1
SV=2
Length = 974
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 5/73 (6%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSS-HKELRCPECRVLVECKVD--- 61
+ LL C +CLDR K+LPCQHTFC CLE + H+ L+CPECR D
Sbjct: 37 IEQLLTCPICLDRY-KQPKLLPCQHTFCYPCLESCADTLHRNLKCPECRAEHNIPYDGVK 95
Query: 62 ELPPNVLLMRILE 74
PN L LE
Sbjct: 96 AFQPNYTLTGFLE 108
>sp|O75382|TRIM3_HUMAN Tripartite motif-containing protein 3 OS=Homo sapiens GN=TRIM3
PE=1 SV=2
Length = 744
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CLDR KVLPC HTFC++CL+ + + L CP CR +L E V L
Sbjct: 19 FLVCSICLDRYQCP-KVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILPEQGVSALQ 77
Query: 65 PNVLLMRILEGL 76
N + ++E +
Sbjct: 78 NNFFISSLMEAM 89
>sp|D3ZQG6|TRIM2_RAT Tripartite motif-containing protein 2 OS=Rattus norvegicus
GN=Trim2 PE=1 SV=2
Length = 744
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CL+R + KVLPC HTFC++CL+ + +H L CP CR +L E V L
Sbjct: 20 FLICSICLERY-KNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQ 78
Query: 65 PNVLLMRILEGL 76
N + +++ L
Sbjct: 79 NNFFITNLMDVL 90
>sp|Q9ESN6|TRIM2_MOUSE Tripartite motif-containing protein 2 OS=Mus musculus GN=Trim2
PE=1 SV=1
Length = 744
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CL+R + KVLPC HTFC++CL+ + +H L CP CR +L E V L
Sbjct: 20 FLICSICLERY-KNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQ 78
Query: 65 PNVLLMRILEGL 76
N + +++ L
Sbjct: 79 NNFFITNLMDVL 90
>sp|Q9C040|TRIM2_HUMAN Tripartite motif-containing protein 2 OS=Homo sapiens GN=TRIM2
PE=1 SV=1
Length = 744
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CL+R + KVLPC HTFC++CL+ + +H L CP CR +L E V L
Sbjct: 20 FLICSICLERY-KNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQ 78
Query: 65 PNVLLMRILEGL 76
N + +++ L
Sbjct: 79 NNFFITNLMDVL 90
>sp|F7H9X2|TRIM2_CALJA Tripartite motif-containing protein 2 OS=Callithrix jacchus
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CL+R + KVLPC HTFC++CL+ + +H L CP CR +L E V L
Sbjct: 20 FLICSICLERY-KNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQ 78
Query: 65 PNVLLMRILEGL 76
N + +++ L
Sbjct: 79 NNFFITNLMDVL 90
>sp|A4IF63|TRIM2_BOVIN Tripartite motif-containing protein 2 OS=Bos taurus GN=TRIM2 PE=2
SV=1
Length = 744
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CL+R + KVLPC HTFC++CL+ + +H L CP CR +L E V L
Sbjct: 20 FLICSICLERY-KNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQ 78
Query: 65 PNVLLMRILEGL 76
N + +++ L
Sbjct: 79 NNFFITNLMDVL 90
>sp|D2GXS7|TRIM2_AILME Tripartite motif-containing protein 2 OS=Ailuropoda melanoleuca
GN=TRIM2 PE=3 SV=1
Length = 744
Score = 57.0 bits (136), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CL+R + KVLPC HTFC++CL+ + +H L CP CR +L E V L
Sbjct: 20 FLICSICLERY-KNPKVLPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILPEKGVAALQ 78
Query: 65 PNVLLMRILEGL 76
N + +++ L
Sbjct: 79 NNFFITNLMDVL 90
>sp|O70277|TRIM3_RAT Tripartite motif-containing protein 3 OS=Rattus norvegicus
GN=Trim3 PE=1 SV=1
Length = 744
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CLDR KVLPC HTFC++CL+ + L CP CR +L E V L
Sbjct: 19 FLVCSICLDRY-RCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEQGVSALQ 77
Query: 65 PNVLLMRILEGL 76
N + ++E +
Sbjct: 78 NNFFISSLMEAM 89
>sp|Q9R1R2|TRIM3_MOUSE Tripartite motif-containing protein 3 OS=Mus musculus GN=Trim3
PE=1 SV=1
Length = 744
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 9 LLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECR---VLVECKVDELP 64
L CS+CLDR KVLPC HTFC++CL+ + L CP CR +L E V L
Sbjct: 19 FLVCSICLDRY-RCPKVLPCLHTFCERCLQNYIPPQSLTLSCPVCRQTSILPEQGVSALQ 77
Query: 65 PNVLLMRILEGL 76
N + ++E +
Sbjct: 78 NNFFISSLMEAM 89
>sp|Q9BRZ2|TRI56_HUMAN E3 ubiquitin-protein ligase TRIM56 OS=Homo sapiens GN=TRIM56 PE=1
SV=3
Length = 755
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 21/89 (23%)
Query: 7 NDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKVDELPPN 66
+D L C +CL++L + K LPC HT+C+ CL ++ + +RCPECR V +PP
Sbjct: 16 SDFLACKICLEQL-RAPKTLPCLHTYCQDCLAQLADGGR-VRCPECRETV-----PVPP- 67
Query: 67 VLLMRILEGLFPLVVSF-IRFFLN-ILDL 93
EG V SF FF+N +LDL
Sbjct: 68 -------EG----VASFKTNFFVNGLLDL 85
>sp|Q80VI1|TRI56_MOUSE E3 ubiquitin-protein ligase TRIM56 OS=Mus musculus GN=Trim56 PE=1
SV=1
Length = 734
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 2/50 (4%)
Query: 7 NDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLV 56
+D L C +CL++L T K LPC HT+C+ CL ++ ++RCPECR +V
Sbjct: 16 SDFLACKICLEQLHTP-KTLPCLHTYCQDCLAQL-DIGGQVRCPECREIV 63
>sp|E1BD59|TRI56_BOVIN E3 ubiquitin-protein ligase TRIM56 OS=Bos taurus GN=TRIM56 PE=3
SV=1
Length = 732
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 7 NDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR 53
+D L C +CL++L K LPC HT+C+ CL ++ + LRCPECR
Sbjct: 16 SDFLACKICLEQLRVP-KTLPCLHTYCQDCLAQLAEGSR-LRCPECR 60
>sp|Q8T390|SH3G3_DROME Endophilin-A OS=Drosophila melanogaster GN=endoA PE=1 SV=1
Length = 369
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L FK++DI+ L ++D+NWF G VNG TG FP SYVQ+
Sbjct: 320 NPGELAFKENDIITLLNRVDDNWFEGAVNGRTGYFPQSYVQV 361
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLPIIN 161
++D+NWF G VNG TG FP SYVQ LP N
Sbjct: 337 RVDDNWFEGAVNGRTGYFPQSYVQVQVPLPNGN 369
>sp|Q8I1I3|SH3G3_DROER Endophilin-A OS=Drosophila erecta GN=endoA PE=3 SV=1
Length = 369
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L FK++DI+ L ++D+NWF G VNG TG FP SYVQ+
Sbjct: 320 NPGELAFKENDIITLLNRVDDNWFEGAVNGRTGYFPQSYVQV 361
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLPIIN 161
++D+NWF G VNG TG FP SYVQ LP N
Sbjct: 337 RVDDNWFEGAVNGRTGYFPQSYVQVQVPLPNGN 369
>sp|O35413|SRBS2_RAT Sorbin and SH3 domain-containing protein 2 OS=Rattus norvegicus
GN=Sorbs2 PE=1 SV=2
Length = 1196
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 54/117 (46%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ---------------------- 129
+L+FKK D V + RKID NW+ GE +G G FP+SYV+
Sbjct: 977 ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPVQPGEI 1036
Query: 130 ------------------------------IDNNWFYGEVNGTT--GAFPMSYVQFV 154
+D NW+ G++ GT G FP+SYV+ V
Sbjct: 1037 GEAIAKYNFNADTNVELSLRKGDRIILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVV 1093
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 91 LDLNFKKDDIVILRRKIDNNWFYGEVNGTT--GAFPMSYVQIDNNWFYGEVNGTTGAFPM 148
++L+ +K D +IL +++D NW+ G++ GT G FP+SYV++ G + P
Sbjct: 1051 VELSLRKGDRIILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKRNTKGSEDYPDPPLPH 1110
Query: 149 SY 150
SY
Sbjct: 1111 SY 1112
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTT--GAFPMSYVQ 129
+L ++ D+V + K D+ WF G T G FP +YV+
Sbjct: 1155 ELELRESDVVDVMEKCDDGWFVGTSRRTKFFGTFPGNYVK 1194
>sp|Q3UTJ2|SRBS2_MOUSE Sorbin and SH3 domain-containing protein 2 OS=Mus musculus GN=Sorbs2
PE=1 SV=2
Length = 1180
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 54/117 (46%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ---------------------- 129
+L+FKK D V + RKID NW+ GE +G G FP+SYV+
Sbjct: 961 ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPVQPGEI 1020
Query: 130 ------------------------------IDNNWFYGEVNGTT--GAFPMSYVQFV 154
+D NW+ G++ GT G FP+SYV+ V
Sbjct: 1021 GEAIAKYNFNADTNVELSLRKGDRIILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVV 1077
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 91 LDLNFKKDDIVILRRKIDNNWFYGEVNGTT--GAFPMSYVQIDNNWFYGEVNGTTGAFPM 148
++L+ +K D +IL +++D NW+ G++ GT G FP+SYV++ G + P
Sbjct: 1035 VELSLRKGDRIILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKRNAKGAEDYPDPPLPH 1094
Query: 149 SY 150
SY
Sbjct: 1095 SY 1096
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTT--GAFPMSYVQ 129
+L ++ D+V + K D+ WF G T G FP +YV+
Sbjct: 1139 ELELRESDVVDVMEKCDDGWFVGTSRRTKFFGTFPGNYVK 1178
>sp|O94875|SRBS2_HUMAN Sorbin and SH3 domain-containing protein 2 OS=Homo sapiens
GN=SORBS2 PE=1 SV=3
Length = 1100
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 54/117 (46%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ---------------------- 129
+L+FKK D V + RKID NW+ GE +G G FP+SYV+
Sbjct: 881 ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPAQPGEI 940
Query: 130 ------------------------------IDNNWFYGEVNGTT--GAFPMSYVQFV 154
+D NW+ G++ GT G FP+SYV+ V
Sbjct: 941 GEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVV 997
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 91 LDLNFKKDDIVILRRKIDNNWFYGEVNGTT--GAFPMSYVQIDNNWFYGEVNGTTGAFPM 148
++L+ +K D VIL +++D NW+ G++ GT G FP+SYV++ G + P
Sbjct: 955 VELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDYPDPPIPH 1014
Query: 149 SY 150
SY
Sbjct: 1015 SY 1016
Score = 30.4 bits (67), Expect = 5.3, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTT--GAFPMSYVQ 129
+L ++ D++ + K D+ WF G T G FP +YV+
Sbjct: 1059 ELELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVK 1098
>sp|Q8I1A6|SH3G3_DROWI Endophilin-A OS=Drosophila willistoni GN=endoA PE=3 SV=1
Length = 366
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L FK++DI+ L ++D+NW+ G VNG TG FP SYVQ+
Sbjct: 320 NPGELGFKENDIITLLNRVDDNWYEGSVNGRTGYFPQSYVQV 361
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLP 158
++D+NW+ G VNG TG FP SYVQ LP
Sbjct: 337 RVDDNWYEGSVNGRTGYFPQSYVQVQVPLP 366
>sp|Q8I1C0|SH3G3_DROPS Endophilin-A OS=Drosophila pseudoobscura pseudoobscura GN=endoA
PE=3 SV=1
Length = 369
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L FK++DI+ L ++D+NW+ G VNG TG FP SYVQ+
Sbjct: 320 NPGELGFKENDIITLLNRVDDNWYEGAVNGRTGYFPQSYVQV 361
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLPIIN 161
++D+NW+ G VNG TG FP SYVQ LP N
Sbjct: 337 RVDDNWYEGAVNGRTGYFPQSYVQVQVPLPNGN 369
>sp|Q8I190|SH3G3_DROVI Endophilin-A OS=Drosophila virilis GN=endoA PE=3 SV=1
Length = 369
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L FK++DI+ L ++D+NW+ G VNG TG FP SYVQ+
Sbjct: 320 NPGELGFKENDIITLLNRVDDNWYEGAVNGRTGYFPQSYVQV 361
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLPIIN 161
++D+NW+ G VNG TG FP SYVQ LP N
Sbjct: 337 RVDDNWYEGAVNGRTGYFPQSYVQVQVPLPNGN 369
>sp|Q810I1|TRI50_RAT E3 ubiquitin-protein ligase TRIM50 OS=Rattus norvegicus GN=Trim50
PE=2 SV=1
Length = 483
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSH--KELRCPECRVLVECKVDEL 63
L D L+C +CL+ + +L C H++CK CL+ + S H ELRCP CR V+C
Sbjct: 10 LQDQLQCPICLE-VFKEPLMLQCGHSYCKNCLDSL-SEHLDSELRCPVCRQSVDCSSS-- 65
Query: 64 PPNVLLMRILEGL 76
PPNV L R+++ L
Sbjct: 66 PPNVSLARVIDAL 78
>sp|Q86XT4|TRI50_HUMAN E3 ubiquitin-protein ligase TRIM50 OS=Homo sapiens GN=TRIM50 PE=1
SV=1
Length = 487
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSH--KELRCPECRVLVECKVDEL 63
L D L+C +CL+ +L C H++CK CL + S H ELRCP CR V+
Sbjct: 10 LEDWLQCPICLEVF-KEPLMLQCGHSYCKGCLVSL-SCHLDAELRCPVCRQAVDGSSSL- 66
Query: 64 PPNVLLMRILEGL 76
PNV L R++E L
Sbjct: 67 -PNVSLARVIEAL 78
>sp|Q865W2|TRI50_PIG E3 ubiquitin-protein ligase TRIM50 OS=Sus scrofa GN=TRIM50 PE=2
SV=1
Length = 486
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSH--KELRCPECRVLVECKVDEL 63
L D L+C VCL+ +L C H++CK CL + S H ELRCP CR V+
Sbjct: 10 LEDRLQCPVCLEVFK-EPLMLQCGHSYCKGCLLSL-SRHLDSELRCPVCRQEVDSSSS-- 65
Query: 64 PPNVLLMRILEGLF------PLVVSFIRFFLNILDLNFKKDDIVI 102
PPNV L R++E L P V + R N L L +KD +I
Sbjct: 66 PPNVSLARVIEALQLPGDPEPQVCTHHR---NPLSLFCEKDQELI 107
>sp|Q810I2|TRI50_MOUSE E3 ubiquitin-protein ligase TRIM50 OS=Mus musculus GN=Trim50 PE=2
SV=1
Length = 483
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 6/73 (8%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSH--KELRCPECRVLVECKVDEL 63
L D L+C +CL+ +L C H++CK CL+ + S H EL CP CR V+C
Sbjct: 10 LQDQLQCPICLEVF-KEPLMLQCGHSYCKDCLDNL-SQHLDSELCCPVCRQSVDCSSS-- 65
Query: 64 PPNVLLMRILEGL 76
PPNV L R+++ L
Sbjct: 66 PPNVSLARVIDAL 78
>sp|Q68EV7|R152B_XENLA E3 ubiquitin-protein ligase rnf152-B OS=Xenopus laevis
GN=rnf152-b PE=2 SV=1
Length = 203
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 1 MDEWTLNDLLECSVCLDRLDTS--SKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVEC 58
M+ + + LLEC +C + K+L C+HT C CL+++ +S K+LRCP CR
Sbjct: 1 METLSQDSLLECQICFNYYSPRRRPKLLDCKHTCCSVCLQQMRASQKDLRCPWCR----- 55
Query: 59 KVDELPPN 66
V +LPP
Sbjct: 56 GVTKLPPG 63
>sp|Q8AXV0|SH3G1_CHICK Endophilin-A2 OS=Gallus gallus GN=SH3GL1 PE=1 SV=1
Length = 367
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L FK+ DI+ L +ID NW+ G +NG +G FP++YV++
Sbjct: 320 NDGELGFKEGDIITLTNQIDENWYEGMINGQSGFFPLNYVEV 361
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLP 158
QID NW+ G +NG +G FP++YV+ + LP
Sbjct: 337 QIDENWYEGMINGQSGFFPLNYVEVLVPLP 366
>sp|Q9D4H7|LONF3_MOUSE LON peptidase N-terminal domain and RING finger protein 3 OS=Mus
musculus GN=Lonrf3 PE=2 SV=1
Length = 753
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 10 LECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR-VLVEC-KVDELPPNV 67
LECS+C+ RL PC HTFC KCLE + + +CP C+ VL++C + NV
Sbjct: 459 LECSLCM-RLFYEPVTTPCGHTFCLKCLERCLDHNA--KCPLCKDVLLQCLPSRKYSKNV 515
Query: 68 LLMRILEGLFP 78
+L ++ P
Sbjct: 516 ILEELIATFLP 526
>sp|E1C2W7|RN152_CHICK E3 ubiquitin-protein ligase RNF152 OS=Gallus gallus GN=RNF152
PE=3 SV=1
Length = 203
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 1 MDEWTLNDLLECSVCLDRLDTS--SKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVEC 58
M+ + + LLEC +C + K+L C+HT C CL+++ +S K+LRCP CR
Sbjct: 1 METLSQDSLLECQICFNYYSPRRRPKLLDCKHTCCSVCLQQMRTSQKDLRCPWCR----- 55
Query: 59 KVDELPPN 66
+ +LPP
Sbjct: 56 GITKLPPG 63
>sp|Q8CH72|TRI32_MOUSE E3 ubiquitin-protein ligase TRIM32 OS=Mus musculus GN=Trim32 PE=1
SV=2
Length = 655
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 6 LNDLLECSVCLDRLDTSS---KVLPCQHTFCKKCLEEIV-SSHKELRCPECRVLVE-CKV 60
L ++LEC +C++ K+L C HT C++CLE+++ SS +RCP C + +
Sbjct: 15 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSL 74
Query: 61 DELPPNVLLMRILE 74
+L N+ +++I++
Sbjct: 75 TQLTDNLTVLKIID 88
>sp|Q13049|TRI32_HUMAN E3 ubiquitin-protein ligase TRIM32 OS=Homo sapiens GN=TRIM32 PE=1
SV=2
Length = 653
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 6 LNDLLECSVCLDRLDTSS---KVLPCQHTFCKKCLEEIV-SSHKELRCPECRVLVE-CKV 60
L ++LEC +C++ K+L C HT C++CLE+++ SS +RCP C + +
Sbjct: 14 LREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITSL 73
Query: 61 DELPPNVLLMRILE 74
+L N+ +++I++
Sbjct: 74 TQLTDNLTVLKIID 87
>sp|Q8N8N0|RN152_HUMAN E3 ubiquitin-protein ligase RNF152 OS=Homo sapiens GN=RNF152 PE=1
SV=1
Length = 203
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 1 MDEWTLNDLLECSVCLDRLDTS--SKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVEC 58
M+ + + LLEC +C + K+L C+HT C CL+++ +S K++RCP CR
Sbjct: 1 METLSQDSLLECQICFNYYSPRRRPKLLDCKHTCCSVCLQQMRTSQKDVRCPWCR----- 55
Query: 59 KVDELPPN 66
V +LPP
Sbjct: 56 GVTKLPPG 63
>sp|O35964|SH3G1_RAT Endophilin-A2 OS=Rattus norvegicus GN=Sh3gl1 PE=1 SV=1
Length = 368
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L F++ D++ L +ID NW+ G ++G +G FP+SYVQ+
Sbjct: 321 NDGELGFREGDLITLTNQIDENWYEGMLHGQSGFFPLSYVQV 362
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLP 158
QID NW+ G ++G +G FP+SYVQ + LP
Sbjct: 338 QIDENWYEGMLHGQSGFFPLSYVQVLVPLP 367
>sp|Q62419|SH3G1_MOUSE Endophilin-A2 OS=Mus musculus GN=Sh3gl1 PE=1 SV=1
Length = 368
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 89 NILDLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
N +L F++ D++ L +ID NW+ G ++G +G FP+SYVQ+
Sbjct: 321 NDGELGFREGDLITLTNQIDENWYEGMLHGQSGFFPLSYVQV 362
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 129 QIDNNWFYGEVNGTTGAFPMSYVQFVWYLP 158
QID NW+ G ++G +G FP+SYVQ + LP
Sbjct: 338 QIDENWYEGMLHGQSGFFPLSYVQVLVPLP 367
>sp|D2H6Z0|RN152_AILME E3 ubiquitin-protein ligase RNF152 OS=Ailuropoda melanoleuca
GN=RNF152 PE=3 SV=1
Length = 203
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 1 MDEWTLNDLLECSVCLDRLDTS--SKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVEC 58
M+ + + LLEC +C + K+L C+HT C CL+++ +S K++RCP CR
Sbjct: 1 METLSQDSLLECQICFNYYSPRRRPKLLDCKHTCCSVCLQQMRTSQKDVRCPWCR----- 55
Query: 59 KVDELPPN 66
+ +LPP
Sbjct: 56 GITKLPPG 63
>sp|Q58EC8|RN152_DANRE E3 ubiquitin-protein ligase rnf152 OS=Danio rerio GN=rnf152 PE=2
SV=1
Length = 198
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 1 MDEWTLNDLLECSVCLDRLDTS--SKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVE 57
MD + + LEC +C + K+L CQHT C CL ++ S +E+RCP CR + +
Sbjct: 1 MDSLSQSSRLECQICFNYFSQRRLPKLLHCQHTCCSVCLSQMRLSQREIRCPWCRCVTQ 59
>sp|D4A723|RN152_RAT E3 ubiquitin-protein ligase RNF152 OS=Rattus norvegicus GN=Rnf152
PE=3 SV=1
Length = 203
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 1 MDEWTLNDLLECSVCLDRLDTS--SKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVEC 58
M+ + + LLEC +C + K+L C+HT C CL+++ +S K++RCP CR
Sbjct: 1 METLSQDSLLECQICFNYYSPRRRPKLLDCKHTCCSVCLQQMRTSQKDVRCPWCR----- 55
Query: 59 KVDELPPN 66
+ +LPP
Sbjct: 56 GITKLPPG 63
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.143 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,682,927
Number of Sequences: 539616
Number of extensions: 2606293
Number of successful extensions: 9511
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 681
Number of HSP's that attempted gapping in prelim test: 8410
Number of HSP's gapped (non-prelim): 1615
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)