RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9673
(162 letters)
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 103
Score = 58.5 bits (141), Expect = 1e-12
Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHK-ELRCPECRVLVECKVDELP 64
+ +LEC +CL+ + C H FCK C+ ++++ K +CP C+ + L
Sbjct: 18 MQKILECPICLELI-KEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCK--NDITKRSLQ 74
Query: 65 PNVLLMRILEGLFPLVVSF 83
+ +++E L ++ +F
Sbjct: 75 ESTRFSQLVEELLKIICAF 93
>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 76
Score = 53.3 bits (128), Expect = 6e-11
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
+L+ K DI+ + R + W+ G +NG TG FP +YV+
Sbjct: 26 ELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFPSNYVRE 64
>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 58
Score = 52.8 bits (127), Expect = 7e-11
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQID 131
+L FK +++ + D NW+ GE + TG FP ++V D
Sbjct: 18 ELTFKHGELITVLDDSDANWWQGENHRGTGLFPSNFVTTD 57
>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 51.2 bits (123), Expect = 3e-10
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
+L F++ D + + D NW+ G +G TG FP +YV
Sbjct: 17 ELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVT 54
>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Caenorhabditis
elegans, SEM-5 [TaxId: 6239]}
Length = 58
Score = 50.8 bits (122), Expect = 4e-10
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
+L FK+ D++ L K D NW+ G++N G FP +YV
Sbjct: 18 ELAFKRGDVITLINKDDPNWWEGQLNNRRGIFPSNYVC 55
>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 50.9 bits (122), Expect = 4e-10
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
DL F++ DI+++ K++ W GE G G FP +V+
Sbjct: 21 DLEFQEGDIILVLSKVNEEWLEGESKGKVGIFPKVFVE 58
>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 98
Score = 51.5 bits (123), Expect = 4e-10
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
+L+F K ++ + K D +W+ GE+NG TG FP +YV++
Sbjct: 50 ELSFSKGQLINVMNKDDPDWWQGEINGVTGLFPSNYVKM 88
Score = 35.3 bits (81), Expect = 6e-04
Identities = 18/84 (21%), Positives = 27/84 (32%), Gaps = 46/84 (54%)
Query: 117 NGTTGAFPMSYVQI---------------------------------------------- 130
+G G FP S+V++
Sbjct: 6 SGQKGWFPASHVKLLGPSSERATPAFHPVCQVIAMYDYAANNEDELSFSKGQLINVMNKD 65
Query: 131 DNNWFYGEVNGTTGAFPMSYVQFV 154
D +W+ GE+NG TG FP +YV+
Sbjct: 66 DPDWWQGEINGVTGLFPSNYVKMT 89
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 97
Score = 51.3 bits (122), Expect = 6e-10
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKVDELPP 65
L LL CS C + L + C+H FC C+ + + + CP C + +L
Sbjct: 19 LEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTG----CPVCY--TPAWIQDLKI 72
Query: 66 NVLLMRILE 74
N L +++
Sbjct: 73 NRQLDSMIQ 81
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine
herpesvirus 1 [TaxId: 10326]}
Length = 68
Score = 50.3 bits (120), Expect = 7e-10
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 11 ECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVE 57
C +CL+ S LPC H FC C+ + + CP C+V VE
Sbjct: 7 RCPICLEDPSNYSMALPCLHAFCYVCITRWIRQNP--TCPLCKVPVE 51
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 50.8 bits (121), Expect = 1e-09
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
+++ + + V + K+ + W+ + TG FP Y+Q
Sbjct: 30 EVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 67
>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 57
Score = 48.5 bits (116), Expect = 3e-09
Identities = 10/38 (26%), Positives = 21/38 (55%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
+L F+ ++V + + +W+ G ++ G FP +YV
Sbjct: 17 ELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVA 54
>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 55
Score = 48.5 bits (116), Expect = 3e-09
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
++ KK DI+ L + +W+ EVN G P +YV+
Sbjct: 16 EVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYVKK 54
>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 69
Score = 48.2 bits (115), Expect = 5e-09
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
DL F + + +++ +K D W+ G + +G FP +YV+
Sbjct: 24 DLTFTEGEEILVTQK-DGEWWTGSIGDRSGIFPSNYVKP 61
>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2
(GRB2), N- and C-terminal domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 56
Score = 47.0 bits (112), Expect = 9e-09
Identities = 15/40 (37%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 92 DLNFKKDDIV-ILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
+L+FK+ DI+ +L + D NW+ E+NG G P +Y+++
Sbjct: 16 ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM 55
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia
proto-oncoprotein PML {Human (Homo sapiens) [TaxId:
9606]}
Length = 56
Score = 47.2 bits (112), Expect = 1e-08
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 8 DLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR 53
L C C K+LPC HT C CLE CP C+
Sbjct: 5 QFLRCQQCQAEA-KCPKLLPCLHTLCSGCLEASGMQ-----CPICQ 44
>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 74
Score = 47.1 bits (112), Expect = 1e-08
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
LNF K DI+ + NW++GEV+G G FP SYV+I
Sbjct: 26 HLNFSKHDIITVLE-QQENWWFGEVHGGRGWFPKSYVKI 63
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein
1 (RAG1), dimerization domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 86
Score = 46.8 bits (111), Expect = 2e-08
Identities = 20/87 (22%), Positives = 29/87 (33%), Gaps = 21/87 (24%)
Query: 6 LNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKVDELPP 65
+ C +C L C+H FC+ C+ + CP CR C +L
Sbjct: 20 FVKSISCQICEHIL-ADPVETSCKHLFCRICILRCLKVMGS-YCPSCR--YPCFPTDLES 75
Query: 66 NVLLMRILEGLFPLVVSFIRFFLNILD 92
V + FLNIL+
Sbjct: 76 PV-----------------KSFLNILN 85
>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 72
Score = 46.4 bits (110), Expect = 3e-08
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 92 DLNFKKDDIVILRRKID-NNWFYGEVNGTTGAFPMSYVQI 130
+L+F + W G +NG TG P +YV+
Sbjct: 26 ELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEF 65
>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 71
Score = 45.9 bits (109), Expect = 3e-08
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNG-TTGAFPMSYVQI 130
+L F K I+ K + W+ G+ G FP +YV+
Sbjct: 22 ELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEE 61
>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 57
Score = 45.5 bits (108), Expect = 4e-08
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV-NGTTGAFPMSYVQ 129
DL FKK DI+ +R K + W+ E G G P+ YV+
Sbjct: 17 DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVE 55
>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 79
Score = 46.0 bits (109), Expect = 4e-08
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 4/42 (9%)
Query: 92 DLNFKKDDIVILRRKID----NNWFYGEVNGTTGAFPMSYVQ 129
+L+ + + + D W+ EVNG G P +Y++
Sbjct: 29 ELSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIR 70
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId:
9606]}
Length = 79
Score = 45.8 bits (108), Expect = 4e-08
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 7 NDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR 53
+ C +C + K+ PC H C CL S + CP CR
Sbjct: 21 STFQLCKICAEND-KDVKIEPCGHLMCTSCLTSWQESEGQ-GCPFCR 65
>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 67
Score = 45.5 bits (108), Expect = 5e-08
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYG-EVNGTTGAFPMSYVQ-IDNN 133
DL +K D + + + W+ + NG G P +YV +++
Sbjct: 24 DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAEDS 67
>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 60
Score = 44.7 bits (106), Expect = 7e-08
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQI 130
+++FK D +I + ID W YG V G TG P +YV+
Sbjct: 19 EVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEA 59
>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 44.8 bits (106), Expect = 8e-08
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQIDN 132
+L F ++D +I +D++W+ GE+ +G+ G FP +YV + N
Sbjct: 16 ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLGN 58
>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 58
Score = 44.8 bits (106), Expect = 8e-08
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 92 DLNFKKDDIVILRRKID--NNWFYGEVNGTTGAFPMSYVQI 130
DL F+K D++ + +K D N+W+ G VNG G FP +YV++
Sbjct: 17 DLPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL 57
>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 64
Score = 43.6 bits (103), Expect = 2e-07
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQIDN 132
DL+FKK + + + + +W+ G TG P +YV +
Sbjct: 18 DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSD 60
>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 63
Score = 43.6 bits (103), Expect = 2e-07
Identities = 8/42 (19%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Query: 92 DLNFKKDDIVILRRKIDNN---WFYGEVNGTTGAFPMSYVQI 130
+L K+ D + + + D + W++ +N G P + + +
Sbjct: 20 ELPMKEGDCMTIIHREDEDEIEWWWARLNDKEGYVPRNLLGL 61
>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 57
Score = 42.8 bits (101), Expect = 3e-07
Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
DL+F K + + + +W+ G TG P +YV
Sbjct: 16 DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 55
>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 53
Score = 43.0 bits (101), Expect = 4e-07
Identities = 9/38 (23%), Positives = 20/38 (52%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQ 129
+++ + + V + K+ + W+ + TG FP Y+Q
Sbjct: 16 EVSLLEGEAVEVIHKLLDGWWVIRKDDVTGYFPSMYLQ 53
>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 67
Score = 42.5 bits (100), Expect = 7e-07
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYG-EVNGTTGAFPMSYVQI 130
DL ++ I+ K D +W+ + G+ G P +YV
Sbjct: 18 DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTG 57
>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo
sapiens) [TaxId: 9606]}
Length = 65
Score = 42.1 bits (99), Expect = 7e-07
Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFY-GEVNGTTGAFPMSYVQIDN 132
DL+F+K D +++ + W G P +YV +
Sbjct: 20 DLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD 61
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa)
[TaxId: 4530]}
Length = 55
Score = 42.2 bits (99), Expect = 7e-07
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 6 LNDLLECSVCLDRLDTSSKV---LPCQHTFCKKCLEEIVSSHKELRCPECR 53
++D +EC+VCL L+ + C H F +C++ + SH CP CR
Sbjct: 2 MDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHS--TCPLCR 50
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 52
Score = 42.0 bits (98), Expect = 8e-07
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 10 LECSVCLDRLDTSSKV---LPCQHTFCKKCLEEIVSSHKELRCPECR 53
+EC +C++ L+ C + C+ C I + + CP CR
Sbjct: 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR-TDENGLCPACR 46
>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 58
Score = 41.4 bits (97), Expect = 1e-06
Identities = 7/41 (17%), Positives = 21/41 (51%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDN 132
++ D+V + K ++ W++ ++ G P S+++ +
Sbjct: 18 EMALSTGDVVEVVEKSESGWWFCQMKAKRGWIPASFLEPLD 58
>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 80
Score = 41.8 bits (98), Expect = 1e-06
Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGT-----TGAFPMSYVQI 130
L+ ++++ +K + W+ GE+ G FP S+V++
Sbjct: 23 QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKL 66
>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 62
Score = 41.0 bits (96), Expect = 2e-06
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFY-GEVNGTTGAFPMSYVQ 129
DL F+K + + + + W G G P ++V
Sbjct: 22 DLGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA 60
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 114
Score = 41.6 bits (96), Expect = 3e-06
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Query: 24 KVLPCQHTFCKKCLEEIVSS---HKELRCPECRVLVECKVDELPP 65
++ C H F CL + + L+CP C+ + K P
Sbjct: 57 RLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKTGTQPW 101
>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 96
Score = 41.3 bits (96), Expect = 3e-06
Identities = 8/40 (20%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
+L + + +D + FY +G G P ++V
Sbjct: 39 ELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVD 78
>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA
1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 72
Score = 40.6 bits (95), Expect = 4e-06
Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYG---EVNGTTGAFPMSYVQI 130
L+F + D++ L + + + + G FP SY ++
Sbjct: 24 LLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKL 65
>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 67
Score = 40.2 bits (94), Expect = 4e-06
Identities = 12/45 (26%), Positives = 21/45 (46%), Gaps = 6/45 (13%)
Query: 92 DLNFKKDDIVILRRKID------NNWFYGEVNGTTGAFPMSYVQI 130
++ KK D++ + K D + W NG G P +Y++I
Sbjct: 22 EVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 66
>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 69
Score = 40.3 bits (94), Expect = 5e-06
Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 92 DLNFKKDDIV-ILRRKIDNNWFYGEV--NGTTGAFPMSYVQ 129
L DIV + + + ++NW+ G G FP + V
Sbjct: 26 FLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVH 66
>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 57
Score = 39.7 bits (93), Expect = 5e-06
Identities = 8/42 (19%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 92 DLNFKKDDIVILRRKIDN-NWFYGEVNGTTGAFPMSYVQIDN 132
L+ K + + + N W + G P +Y+ N
Sbjct: 16 TLSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYITPVN 57
>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 59
Score = 39.5 bits (92), Expect = 6e-06
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQI 130
+L+ KDD++ + W +G +G P + + I
Sbjct: 17 ELSVMKDDVLEILDDRRQWWKVRNASGDSGFVPNNILDI 55
>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel
{Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Length = 96
Score = 39.9 bits (93), Expect = 1e-05
Identities = 8/40 (20%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV---NGTTGAFPMSYV 128
++F+ D + ++ K +N+W+ G + G P
Sbjct: 44 AISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVK 83
>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 71
Score = 39.1 bits (91), Expect = 1e-05
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 92 DLNFKKDDIVI-LRRKIDNNWFYGEV-NGTTGAFPMSYVQI 130
DL F K D++ + D NW+ + G G P +YVQ
Sbjct: 22 DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQK 62
>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 93
Score = 39.3 bits (91), Expect = 2e-05
Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 21/63 (33%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDNNWFYGEVNGTTGAFPMSYV 151
+++F DI+ + K W YG G G FP +YV
Sbjct: 21 EMSFNSGDIIQVDEKTVGEP---------------------GWLYGSFQGNFGWFPCNYV 59
Query: 152 QFV 154
+ +
Sbjct: 60 EKM 62
>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 38.4 bits (89), Expect = 3e-05
Identities = 12/68 (17%), Positives = 22/68 (32%), Gaps = 18/68 (26%)
Query: 92 DLNFKKDDIVILRRK-----IDNNWFYGEVNGTTGAFPMSYVQIDNNWFYGEVNGTTGAF 146
+L K D+V++ D W G + + E+ G F
Sbjct: 28 ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKES-------------DWNQHKELEKCRGVF 74
Query: 147 PMSYVQFV 154
P ++ + V
Sbjct: 75 PENFTERV 82
>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus
[TaxId: 10090]}
Length = 53
Score = 37.6 bits (87), Expect = 4e-05
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGE-VNGTTGAFPMSYVQ 129
+L + D+ L + +W+ + NG G P SY+
Sbjct: 14 ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52
>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 145
Score = 38.9 bits (90), Expect = 5e-05
Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 3/41 (7%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV---NGTTGAFPMSYVQ 129
++F D + ++ K +N+W+ G + G P
Sbjct: 46 AVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRL 86
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 38.1 bits (88), Expect = 5e-05
Identities = 13/75 (17%), Positives = 23/75 (30%), Gaps = 12/75 (16%)
Query: 7 NDLLECSVCLDRLDTSS--KVLPCQHTFCKKCLEEIVSSH------KELRCPECRVLVEC 58
+ C +CL + CQ FC CL++ V + CP+ C
Sbjct: 3 SGSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAA----C 58
Query: 59 KVDELPPNVLLMRIL 73
+ ++
Sbjct: 59 PKQGHLQENEIECMV 73
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain
{Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8
[TaxId: 37296]}
Length = 60
Score = 36.8 bits (84), Expect = 8e-05
Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Query: 8 DLLECSVCLDRLD----TSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR 53
D+ C +C + L + + CL ++ + C C
Sbjct: 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICG 54
>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 56
Score = 36.4 bits (84), Expect = 1e-04
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 92 DLNFKKDDIVILRRKIDNNW---FYGEVNGTTGAFPMSYVQI 130
++ D + L + + + G TG P +Y++I
Sbjct: 15 EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 56
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens)
[TaxId: 9606]}
Length = 65
Score = 35.9 bits (82), Expect = 2e-04
Identities = 13/50 (26%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Query: 8 DLLECSVCLDRL----DTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR 53
D C C V C HT C+ C++ + CPEC
Sbjct: 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLF-VRGAGNCPECG 50
>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 71
Score = 35.2 bits (81), Expect = 4e-04
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 20/70 (28%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDNNWFYGEVNGTTGAFPMSYV 151
+LNF+K + + + K +N+ W G G P +YV
Sbjct: 22 ELNFEKGETMEVIEKPEND--------------------PEWWKCKNARGQVGLVPKNYV 61
Query: 152 QFVWYLPIIN 161
+ P ++
Sbjct: 62 VVLSDGPALH 71
>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha
subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 83
Score = 35.1 bits (80), Expect = 4e-04
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 10/65 (15%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEVNGTTGAFPMSYVQIDNNWFYG--EVNGTTGAFPMS 149
D++ DI+ + + + + + W G E G G FP +
Sbjct: 19 DIDLHLGDILTVNKGSLVALGFSD--------GQEARPEEIGWLNGYNETTGERGDFPGT 70
Query: 150 YVQFV 154
YV+++
Sbjct: 71 YVEYI 75
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 78
Score = 35.1 bits (80), Expect = 5e-04
Identities = 7/67 (10%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 8 DLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKVDELPPNV 67
+ C + L+ + ++ T+ + +++ + + + L PN
Sbjct: 7 EYFRCPISLELM-KDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQE---TLLHAGLTPNY 62
Query: 68 LLMRILE 74
+L ++
Sbjct: 63 VLKSLIA 69
>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 96
Score = 34.7 bits (79), Expect = 8e-04
Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 6/44 (13%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV------NGTTGAFPMSYVQ 129
L+F+ D++ + D W+ G P
Sbjct: 22 ALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRV 65
>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium
channel {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 136
Score = 34.2 bits (78), Expect = 0.002
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 92 DLNFKKDDIVILRRKIDNNWFYGEV--NGTTGAFPMSYVQIDN 132
+NF+ D + ++ K N+W+ G + G AF S ++++
Sbjct: 46 GVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLES 88
>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 74
Score = 32.0 bits (72), Expect = 0.006
Identities = 5/44 (11%), Positives = 12/44 (27%), Gaps = 6/44 (13%)
Query: 92 DLNFKKDDIVILRRKIDNNWFY------GEVNGTTGAFPMSYVQ 129
++ + ++V + N G P S +
Sbjct: 23 EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILA 66
>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 31.7 bits (71), Expect = 0.009
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 92 DLNFKKDDIVILRRKID----NNWFYGEVNGTTGAFPMSYVQIDN 132
D++ + D+V + +K D N + + T G S+++ N
Sbjct: 33 DVSLLEGDLVGVIKKKDPMGSQNRWLIDNGVTKGFVYSSFLKPYN 77
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF
ubiquitin ligase complex {Human (Homo sapiens) [TaxId:
9606]}
Length = 88
Score = 31.6 bits (71), Expect = 0.010
Identities = 8/60 (13%), Positives = 16/60 (26%), Gaps = 19/60 (31%)
Query: 11 ECSVCLDRLDTSSK-----------------VLPCQHTFCKKCLEEIVSSHKELRCPECR 53
C++C + + C H F C+ + + + CP
Sbjct: 23 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQV--CPLDN 80
>d1h8ga_ b.109.1.1 (A:) Choline binding domain of autolysin C-LytA
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 95
Score = 31.7 bits (72), Expect = 0.011
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 106 KIDNNWFYGEVNGTTGAFPMSYVQIDNNWFYGEVNGTTGA 145
KI + W+Y G A +V+ + W+Y ++ GA
Sbjct: 20 KIADKWYYFNEEG---AMKTGWVKYKDTWYY--LDAKEGA 54
Score = 28.7 bits (64), Expect = 0.12
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 7/37 (18%)
Query: 108 DNNWFYGEVNGT--TGAFPMSYVQIDNNWFYGEVNGT 142
D NW++ + +G TG + +I + W+Y G
Sbjct: 2 DGNWYWFDNSGEMATG-----WKKIADKWYYFNEEGA 33
>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 31.2 bits (70), Expect = 0.016
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 11/51 (21%)
Query: 92 DLNFKKDDIVILRRKIDNNWF-----------YGEVNGTTGAFPMSYVQID 131
L + +V + K+ YG++ G FP S V+ D
Sbjct: 37 FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVRED 87
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 56
Score = 30.1 bits (67), Expect = 0.018
Identities = 7/44 (15%), Positives = 12/44 (27%), Gaps = 2/44 (4%)
Query: 10 LECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR 53
+ C++ + F K LE+ V P
Sbjct: 1 MLCAISGKVPRRPVLSPKSRTIFEKSLLEQYVKDTG--NDPITN 42
>d2nn6i1 b.40.4.5 (I:61-185) Exosome component 1, EXOSC1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 125
Score = 30.6 bits (69), Expect = 0.037
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 18 RLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVECKV 60
L T+ L + ++ + S E++CP+ KV
Sbjct: 83 LLTTAENELGVVVAHSESGIQMVPISWCEMQCPKTHTKEFRKV 125
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 64
Score = 28.5 bits (63), Expect = 0.087
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 6/49 (12%)
Query: 11 ECSVCLDRLDTSSKVLPC------QHTFCKKCLEEIVSSHKELRCPECR 53
+C C + + C H C K K+ +CP C
Sbjct: 8 QCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCS 56
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 73
Score = 26.5 bits (58), Expect = 0.45
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 28 CQHTFCKKCLEEIVSSHKELRCPECR 53
C TFC +C + H+ C + +
Sbjct: 42 CHQTFCVRCKRQWEEQHRGRSCEDFQ 67
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human
(Homo sapiens) [TaxId: 9606]}
Length = 98
Score = 27.1 bits (59), Expect = 0.55
Identities = 3/46 (6%), Positives = 11/46 (23%)
Query: 8 DLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECR 53
D + + + + T + + + S +
Sbjct: 21 DEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSP 66
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 79
Score = 25.8 bits (56), Expect = 1.0
Identities = 9/48 (18%), Positives = 15/48 (31%), Gaps = 6/48 (12%)
Query: 12 CSVCLDRLDTSSKVLPC------QHTFCKKCLEEIVSSHKELRCPECR 53
+C + + ++ C H C EE CP+C
Sbjct: 14 YCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCE 61
>d2biba1 b.109.1.1 (A:309-541) Teichoic acid phosphorylcholine
esterase Pce (LytD), C-terminal domain {Streptococcus
pneumoniae [TaxId: 1313]}
Length = 233
Score = 27.0 bits (58), Expect = 1.1
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Query: 108 DNNWFYGEVNGTTGAFPMSYVQIDNNWFYGEVNG 141
NW+Y + T G + + + +I+ W+Y G
Sbjct: 11 YGNWWYQAPDST-GEYAVGWNEIEGEWYYFNQTG 43
Score = 24.7 bits (52), Expect = 6.0
Identities = 7/35 (20%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 107 IDNNWFYGEVNGTTGAFPMSYVQIDNNWFYGEVNG 141
N+W++ T G+ + +++ + W++ + NG
Sbjct: 173 KANDWYF---YKTDGSRAVGWIKDKDKWYFLKENG 204
>d1faqa_ g.49.1.1 (A:) RAF-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 52
Score = 24.9 bits (54), Expect = 1.2
Identities = 8/41 (19%), Positives = 15/41 (36%)
Query: 3 EWTLNDLLECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSS 43
T L C +C L + C + F + C ++ +
Sbjct: 8 RKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPTM 48
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia
coli [TaxId: 562]}
Length = 71
Score = 24.8 bits (54), Expect = 2.3
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 8/48 (16%)
Query: 10 LECSVCLDRLDTSSKVLPCQHTFCKKCLEEIVSSHKELRCPECRVLVE 57
L C C LD + H C+ C E I + CP+C ++
Sbjct: 3 LHCPQCQHVLDQDN-----GHARCRSCGEFIE---MKALCPDCHQPLQ 42
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 70
Score = 23.8 bits (51), Expect = 3.9
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 28 CQHTFCKKCLEEIVSS--HKELRCPECRVLVECKVDE 62
C+ F C + +E C C VL + K ++
Sbjct: 25 CEFCFHLDCHLPALQDVPGEEWSCSLCHVLPDLKEED 61
>d1idka_ b.80.1.2 (A:) Pectin lyase {Aspergillus niger, type A
[TaxId: 5061]}
Length = 359
Score = 25.1 bits (54), Expect = 5.4
Identities = 5/31 (16%), Positives = 12/31 (38%)
Query: 107 IDNNWFYGEVNGTTGAFPMSYVQIDNNWFYG 137
+ N+ Y + + + NN++Y
Sbjct: 225 MKGNYIYHTSGRSPKVQDNTLLHAVNNYWYD 255
>d1b8ta4 g.39.1.3 (A:144-192) Cysteine-rich (intestinal) protein,
CRP, CRIP {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 49
Score = 22.8 bits (49), Expect = 6.7
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 12 CSVCLDRLDTSSKVLPCQHTFCKKC 36
C+ C L++++ +CK C
Sbjct: 2 CAKCGKSLESTTLADKDGEIYCKGC 26
>d1wfla_ g.80.1.1 (A:) Zinc finger A20 domain containing protein 2
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 74
Score = 23.3 bits (50), Expect = 7.6
Identities = 5/25 (20%), Positives = 10/25 (40%)
Query: 12 CSVCLDRLDTSSKVLPCQHTFCKKC 36
C +C ++ + C + FC
Sbjct: 28 CFMCRKKVGLTGFDCRCGNLFCGLH 52
>d1th0a_ d.3.1.7 (A:) Sentrin-specific protease 2, SENP2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 226
Score = 24.4 bits (52), Expect = 8.0
Identities = 5/33 (15%), Positives = 14/33 (42%), Gaps = 2/33 (6%)
Query: 75 GLFPLVVSFIRFFLNILDLNFKKDDIVILRRKI 107
G+F + + + F + + + R+K+
Sbjct: 186 GMF--TCKYADYISRDKPITFTQHQMPLFRKKM 216
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.143 0.470
Gapped
Lambda K H
0.267 0.0510 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 680,643
Number of extensions: 33476
Number of successful extensions: 292
Number of sequences better than 10.0: 1
Number of HSP's gapped: 238
Number of HSP's successfully gapped: 98
Length of query: 162
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 83
Effective length of database: 1,322,926
Effective search space: 109802858
Effective search space used: 109802858
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.2 bits)