Query psy968
Match_columns 272
No_of_seqs 158 out of 483
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 16:50:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy968.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/968hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kvt_A Potassium channel prote 100.0 2.6E-32 8.7E-37 221.5 9.1 98 164-265 3-100 (115)
2 1t1d_A Protein (potassium chan 100.0 1.3E-31 4.5E-36 212.9 4.7 95 166-264 1-96 (100)
3 1s1g_A Potassium voltage-gated 100.0 5.8E-31 2E-35 216.2 7.8 100 161-265 8-107 (124)
4 1nn7_A Potassium channel KV4.2 100.0 8.6E-31 2.9E-35 208.9 6.8 94 167-265 1-94 (105)
5 2nz0_B Potassium voltage-gated 100.0 2.7E-30 9.2E-35 216.4 7.7 98 163-265 32-129 (140)
6 3drz_A BTB/POZ domain-containi 100.0 4.5E-29 1.5E-33 198.4 7.5 91 164-256 4-95 (107)
7 3drx_A BTB/POZ domain-containi 99.9 1.5E-26 5.1E-31 204.8 9.6 90 164-255 10-100 (202)
8 2r9r_B Paddle chimera voltage 99.9 5.5E-25 1.9E-29 214.5 6.7 95 162-260 48-143 (514)
9 1r29_A B-cell lymphoma 6 prote 98.2 1.6E-06 5.6E-11 67.9 5.8 85 166-256 30-114 (127)
10 3ohu_A Transcription regulator 98.2 3.5E-06 1.2E-10 65.9 7.7 90 167-264 34-123 (125)
11 3ga1_A Nucleus accumbens-assoc 98.1 3.7E-06 1.3E-10 66.3 5.8 90 167-266 35-124 (129)
12 1nn7_A Potassium channel KV4.2 98.1 1.1E-06 3.8E-11 69.5 2.2 46 24-69 47-92 (105)
13 1t1d_A Protein (potassium chan 98.1 1.4E-06 4.8E-11 68.8 2.3 40 22-61 47-87 (100)
14 1s1g_A Potassium voltage-gated 98.0 1.9E-06 6.7E-11 70.3 3.2 46 24-69 60-105 (124)
15 2nz0_B Potassium voltage-gated 98.0 2.8E-06 9.5E-11 70.9 3.3 47 24-70 82-128 (140)
16 2vpk_A Myoneurin; transcriptio 98.0 8.3E-06 2.8E-10 62.9 5.7 81 166-255 23-104 (116)
17 3b84_A Zinc finger and BTB dom 98.0 7.4E-06 2.5E-10 63.9 5.1 79 167-255 26-104 (119)
18 2ihc_A Transcription regulator 98.0 7.8E-06 2.7E-10 64.2 5.1 92 166-265 30-121 (124)
19 2if5_A Zinc finger and BTB dom 97.9 8.2E-06 2.8E-10 63.2 4.7 85 166-256 26-110 (120)
20 3kvt_A Potassium channel prote 97.9 4.5E-06 1.5E-10 67.3 2.4 48 23-70 52-99 (115)
21 2z8h_A Transcription regulator 97.9 1.5E-05 5E-10 63.7 5.4 93 166-266 37-129 (138)
22 2yy9_A Zinc finger and BTB dom 97.9 1.2E-05 4.3E-10 64.2 4.9 87 167-264 27-113 (135)
23 3drz_A BTB/POZ domain-containi 97.9 6.2E-06 2.1E-10 64.9 3.1 40 22-61 55-94 (107)
24 2ppi_A Gigaxonin; BTB domain, 97.8 2E-05 6.8E-10 63.9 5.8 87 166-256 48-134 (144)
25 2vkp_A BTB/POZ domain-containi 97.8 2.8E-05 9.5E-10 58.9 5.6 84 166-256 9-96 (109)
26 2q81_A MIZ-1 protein; BTB/POZ 97.8 1.5E-05 5.2E-10 62.1 3.9 80 166-256 28-107 (119)
27 1buo_A POZ domain, protein (pr 97.8 1.3E-05 4.5E-10 62.5 3.3 80 166-256 29-108 (121)
28 3fkc_A Transcriptional regulat 97.8 1.9E-05 6.5E-10 61.7 4.1 78 167-255 33-111 (116)
29 3hve_A Gigaxonin; ubiquitin, c 97.7 4.4E-05 1.5E-09 66.3 6.0 86 166-255 32-117 (256)
30 3htm_A Speckle-type POZ protei 97.7 3.6E-05 1.2E-09 62.3 4.7 83 167-255 36-118 (172)
31 3m5b_A Zinc finger and BTB dom 97.6 0.0001 3.4E-09 58.3 5.9 86 167-268 32-117 (119)
32 4eoz_A Speckle-type POZ protei 97.5 3.7E-05 1.3E-09 60.5 2.9 83 167-255 27-109 (145)
33 3i3n_A Kelch-like protein 11; 97.5 9.7E-05 3.3E-09 65.0 5.6 84 167-255 34-125 (279)
34 3drx_A BTB/POZ domain-containi 97.3 6.6E-05 2.3E-09 66.4 1.8 39 23-61 62-100 (202)
35 3hqi_A Speckle-type POZ protei 96.9 0.00044 1.5E-08 61.5 2.9 84 166-255 175-258 (312)
36 2r9r_B Paddle chimera voltage 96.4 0.0018 6.2E-08 63.1 3.6 40 22-61 98-138 (514)
37 1buo_A POZ domain, protein (pr 90.9 0.27 9.2E-06 37.8 4.5 41 20-61 67-107 (121)
38 3m5b_A Zinc finger and BTB dom 90.8 0.15 5.1E-06 39.9 3.0 42 19-61 64-105 (119)
39 2vpk_A Myoneurin; transcriptio 89.8 0.24 8.1E-06 37.6 3.3 40 21-61 65-104 (116)
40 3ga1_A Nucleus accumbens-assoc 89.5 0.28 9.7E-06 38.1 3.7 41 21-62 75-115 (129)
41 3b84_A Zinc finger and BTB dom 88.6 0.33 1.1E-05 37.3 3.4 41 20-61 64-104 (119)
42 2q81_A MIZ-1 protein; BTB/POZ 88.3 0.35 1.2E-05 37.1 3.4 42 19-61 65-106 (119)
43 3fkc_A Transcriptional regulat 88.0 0.22 7.7E-06 38.3 2.1 42 20-61 70-111 (116)
44 2if5_A Zinc finger and BTB dom 87.8 0.33 1.1E-05 36.9 2.9 41 20-61 69-109 (120)
45 2ppi_A Gigaxonin; BTB domain, 87.6 0.46 1.6E-05 38.0 3.8 41 20-61 93-133 (144)
46 2ast_A S-phase kinase-associat 87.2 0.41 1.4E-05 39.4 3.4 93 168-267 3-123 (159)
47 2vkp_A BTB/POZ domain-containi 86.8 0.48 1.6E-05 35.2 3.3 42 19-61 54-95 (109)
48 3ohu_A Transcription regulator 86.8 0.45 1.5E-05 36.5 3.2 40 22-62 77-116 (125)
49 1r29_A B-cell lymphoma 6 prote 86.8 0.49 1.7E-05 36.4 3.4 40 21-61 74-113 (127)
50 2yy9_A Zinc finger and BTB dom 86.3 0.51 1.8E-05 37.1 3.3 41 20-61 65-105 (135)
51 2ihc_A Transcription regulator 84.1 0.57 1.9E-05 36.2 2.6 41 21-62 73-113 (124)
52 4eoz_A Speckle-type POZ protei 83.0 0.7 2.4E-05 35.7 2.7 41 20-61 69-109 (145)
53 4ajy_C Transcription elongatio 82.7 1.5 5.2E-05 33.1 4.5 77 172-253 9-96 (97)
54 3hve_A Gigaxonin; ubiquitin, c 82.6 0.79 2.7E-05 39.3 3.2 42 19-61 76-117 (256)
55 3htm_A Speckle-type POZ protei 81.1 0.88 3E-05 36.2 2.7 41 20-61 78-118 (172)
56 2z8h_A Transcription regulator 80.6 1.3 4.4E-05 34.7 3.5 40 21-61 80-119 (138)
57 3i3n_A Kelch-like protein 11; 78.2 1 3.5E-05 39.2 2.4 39 22-61 87-125 (279)
58 2ast_A S-phase kinase-associat 64.4 2.6 8.8E-05 34.5 1.6 69 19-88 45-138 (159)
59 2p1m_A SKP1-like protein 1A; F 58.8 3.5 0.00012 33.9 1.5 91 166-267 4-122 (160)
60 1fs1_B SKP1, cyclin A/CDK2-ass 57.4 5 0.00017 32.3 2.2 88 168-267 4-118 (141)
61 4dzz_A Plasmid partitioning pr 57.2 6 0.0002 31.6 2.6 52 28-80 69-122 (206)
62 3pg5_A Uncharacterized protein 57.2 10 0.00036 34.4 4.5 65 28-94 141-213 (361)
63 3hqi_A Speckle-type POZ protei 56.6 3.4 0.00012 36.3 1.1 42 19-61 217-258 (312)
64 2oze_A ORF delta'; para, walke 50.1 5.3 0.00018 34.4 1.2 55 26-80 142-202 (298)
65 3ea0_A ATPase, para family; al 49.2 6.7 0.00023 32.2 1.7 58 23-80 103-166 (245)
66 3q9l_A Septum site-determining 48.0 13 0.00045 30.7 3.3 61 23-83 97-164 (260)
67 2ph1_A Nucleotide-binding prot 47.8 10 0.00035 32.2 2.7 52 24-75 113-173 (262)
68 4ajy_C Transcription elongatio 45.5 14 0.00049 27.6 2.9 39 19-58 46-95 (97)
69 1fs1_B SKP1, cyclin A/CDK2-ass 44.3 7.4 0.00025 31.3 1.2 68 20-88 41-133 (141)
70 3kjh_A CO dehydrogenase/acetyl 41.1 12 0.00041 30.4 2.0 47 26-72 118-171 (254)
71 3k9g_A PF-32 protein; ssgcid, 40.4 7.5 0.00026 32.8 0.7 56 24-79 130-191 (267)
72 1g3q_A MIND ATPase, cell divis 38.0 12 0.00042 30.6 1.6 52 25-76 98-155 (237)
73 2p1m_A SKP1-like protein 1A; F 37.4 11 0.00037 30.9 1.2 22 19-40 43-64 (160)
74 1hyq_A MIND, cell division inh 37.3 23 0.00078 29.6 3.2 52 25-76 97-154 (263)
75 3bfv_A CAPA1, CAPB2, membrane 34.4 20 0.00068 31.3 2.4 55 26-80 179-240 (271)
76 1b0n_B Protein (SINI protein); 33.3 14 0.00049 26.4 1.1 33 15-47 19-51 (57)
77 3cwq_A Para family chromosome 33.0 10 0.00036 31.4 0.4 53 27-79 60-115 (209)
78 1wxm_A A-RAF proto-oncogene se 32.5 27 0.00091 27.1 2.6 29 109-137 46-76 (86)
79 1wcv_1 SOJ, segregation protei 32.4 16 0.00053 30.9 1.4 54 26-79 101-158 (257)
80 2fnj_C Transcription elongatio 32.3 74 0.0025 23.8 5.1 82 168-254 3-96 (96)
81 2ys8_A RAB-related GTP-binding 30.6 32 0.0011 25.4 2.7 36 18-55 7-48 (90)
82 3end_A Light-independent proto 29.2 12 0.00041 32.5 0.1 47 33-79 155-204 (307)
83 3ez9_A Para; DNA binding, wing 29.0 17 0.00058 33.1 1.1 48 33-80 246-295 (403)
84 1hv2_A Elongin C, ELC1; protei 28.5 98 0.0033 23.3 5.2 60 165-231 3-63 (99)
85 2xj4_A MIPZ; replication, cell 27.9 14 0.00049 31.9 0.3 50 30-79 99-150 (286)
86 3la6_A Tyrosine-protein kinase 27.5 29 0.001 30.7 2.3 57 26-82 189-252 (286)
87 3ez2_A Plasmid partition prote 27.4 21 0.00071 32.4 1.4 50 31-80 241-292 (398)
88 1cp2_A CP2, nitrogenase iron p 26.9 11 0.00037 31.7 -0.6 46 34-79 115-165 (269)
89 3cio_A ETK, tyrosine-protein k 24.4 43 0.0015 29.6 2.8 56 25-80 200-262 (299)
90 3lfp_A CSP231I C protein; tran 24.3 71 0.0024 22.9 3.6 45 16-64 19-63 (98)
91 4fqn_A Malcavernin; helical do 22.7 91 0.0031 24.7 4.1 44 27-95 36-91 (98)
92 2efv_A Hypothetical protein MJ 22.3 30 0.001 27.1 1.2 20 65-84 19-38 (92)
93 2afh_E Nitrogenase iron protei 21.5 16 0.00053 31.4 -0.6 46 34-79 118-168 (289)
94 2i5i_A UPF0249 protein EF_3048 20.6 49 0.0017 29.1 2.4 29 13-41 6-34 (263)
No 1
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=99.97 E-value=2.6e-32 Score=221.52 Aligned_cols=98 Identities=21% Similarity=0.291 Sum_probs=91.8
Q ss_pred CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHH
Q psy968 164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQ 243 (272)
Q Consensus 164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~ 243 (272)
++++|+|||||++|+|+++||.++|+|+||+|++.. ..+++++||||||| ||.+|++||||||+|+|++|+++|..
T Consensus 3 ~~~~V~LNVGG~~f~T~~~TL~~~P~s~L~~l~~~~--~~~~~~~g~~FiDR--dp~~F~~ILnylR~G~l~~p~~~~~~ 78 (115)
T 3kvt_A 3 AENRVIINVGGIRHETYKATLKKIPATRLSRLTEGM--LNYDPVLNEYFFDR--HPGVFAQIINYYRSGKLHYPTDVCGP 78 (115)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTTSCSSTTTTCCTTS--TTEETTTTEEEECS--CTTTHHHHHHHHHHSCBCCCSSSCHH
T ss_pred CCCEEEEEECCEEEEecHHHHhcCCCccHHHHhcCC--CCCCCCCCcEEEec--ChHHHHHHHHHhcCCCCCCCCcccHH
Confidence 468999999999999999999999999999999753 24678999999999 99999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCccccccc
Q psy968 244 ELREACDYLLVPFDAHTVRCQN 265 (272)
Q Consensus 244 ~f~eE~~Ff~Ip~~~~~~cC~~ 265 (272)
.|++|++||+|+...+..||+.
T Consensus 79 ~~~~Ea~fy~i~~~~l~~CC~~ 100 (115)
T 3kvt_A 79 LFEEELEFWGLDSNQVEPCCWM 100 (115)
T ss_dssp HHHHHHHHHTCCGGGBCGGGSH
T ss_pred HHHHHHHHhCCChHHHHHHHHH
Confidence 9999999999999999999974
No 2
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=99.97 E-value=1.3e-31 Score=212.85 Aligned_cols=95 Identities=23% Similarity=0.324 Sum_probs=86.5
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC-CeeecCCCCCHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG-QVIKCPPSVSVQE 244 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT-GkLh~P~~vc~~~ 244 (272)
++|+|||||++|+|+++||+++|+||||+|+++. ..+++++||||||| ||.+|++||||||+ |+|++|+++|...
T Consensus 1 ~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~--~~~~~~~~eyFiDR--dp~~F~~ILnflR~~G~l~~p~~~~~~~ 76 (100)
T 1t1d_A 1 ERVVINVSGLRFETQLKTLNQFPDTLLGNPQKRN--RYYDPLRNEYFFDR--NRPSFDAILYFYQSGGRLRRPVNVPLDV 76 (100)
T ss_dssp CEEEEEETTEEEEEEHHHHHTSTTSTTTCHHHHG--GGEETTTTEEEECS--CSTTHHHHHHHHHTTSCCCCCTTSCHHH
T ss_pred CEEEEEECCEEEEeeHHHHhcCCCccccchhccc--cccCCCceeEEEcC--ChHHHHHHHHHHhcCCcccCCCCCCHHH
Confidence 5799999999999999999999999999998753 24788999999999 99999999999999 9999999999999
Q ss_pred HHHHHHhcCCCCCCcccccc
Q psy968 245 LREACDYLLVPFDAHTVRCQ 264 (272)
Q Consensus 245 f~eE~~Ff~Ip~~~~~~cC~ 264 (272)
|++||+||+|+...+..|..
T Consensus 77 ~~~Ea~fy~i~~~~~~~~~~ 96 (100)
T 1t1d_A 77 FSEEIKFYELGENAFERYRE 96 (100)
T ss_dssp HHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHH
Confidence 99999999998876665443
No 3
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=99.97 E-value=5.8e-31 Score=216.20 Aligned_cols=100 Identities=22% Similarity=0.396 Sum_probs=90.0
Q ss_pred CCCCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCC
Q psy968 161 IPTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSV 240 (272)
Q Consensus 161 ~p~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~v 240 (272)
.+..+++|+|||||++|+|+++||+++|+||||+ ++....+++++|+||||| ||.+|++||||||+|+|++|+++
T Consensus 8 ~~~~~~~V~LNVGG~~F~t~~~TL~~~p~S~L~~---~~~~~~~~~~~g~~FiDR--dp~~F~~ILnflR~G~l~~p~~~ 82 (124)
T 1s1g_A 8 NKRQDELIVLNVSGRRFQTWRTTLERYPDTLLGS---TEKEFFFNEDTKEYFFDR--DPEVFRCVLNFYRTGKLHYPRYE 82 (124)
T ss_dssp ----CCEEEEEETTEEEEEEHHHHTTSTTSSTTS---SGGGGTBCSSSCSEEECS--CHHHHHHHHHHHHHSCBCCCTTS
T ss_pred CCCCCCEEEEEeCCEEEEEeHHHHhcCCCceecc---cCCcccccCCCCcEEEcC--ChHHHHHHHHHHhcCCCCCCCCc
Confidence 3456799999999999999999999999999998 233345789999999999 99999999999999999999999
Q ss_pred CHHHHHHHHHhcCCCCCCccccccc
Q psy968 241 SVQELREACDYLLVPFDAHTVRCQN 265 (272)
Q Consensus 241 c~~~f~eE~~Ff~Ip~~~~~~cC~~ 265 (272)
|...|++||+||+|+...+..||+.
T Consensus 83 ~~~~l~~Ea~fy~i~~l~l~~cC~~ 107 (124)
T 1s1g_A 83 CISAYDDELAFYGILPEIIGDCCYE 107 (124)
T ss_dssp CHHHHHHHHHHTTCCGGGBCHHHHH
T ss_pred CHHHHHHHHHHcCCChHHHHHHHHH
Confidence 9999999999999999999999974
No 4
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=99.96 E-value=8.6e-31 Score=208.91 Aligned_cols=94 Identities=22% Similarity=0.391 Sum_probs=87.5
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
+|+|||||++|+|+++||+++|+||||++ .....+++++|+||||| ||.+|++||||||+|+|++|+++|...|+
T Consensus 1 ~V~LNVGG~~f~t~~~TL~~~p~s~L~~~---~~~~~~~~~~~~~FiDR--dp~~F~~ILnflR~g~l~~p~~~~~~~l~ 75 (105)
T 1nn7_A 1 LIVLNVSGTRFQTWQDTLERYPDTLLGSS---ERDFFYHPETQQYFFDR--DPDIFRHILNFYRTGKLHYPRHECISAYD 75 (105)
T ss_dssp CEEEEETTEEEEECHHHHHTSCSSSTTSG---GGGGGEEGGGTEEEECS--CTTTHHHHHHHHHHSCBCCCTTSCHHHHH
T ss_pred CEEEEECCEEEEEeHHHHhcCCCcccccc---CCcccccCCCCcEEEeC--CcHHHHHHHHHHhcCCCCCCCCcCHHHHH
Confidence 58999999999999999999999999993 22335789999999999 99999999999999999999999999999
Q ss_pred HHHHhcCCCCCCccccccc
Q psy968 247 EACDYLLVPFDAHTVRCQN 265 (272)
Q Consensus 247 eE~~Ff~Ip~~~~~~cC~~ 265 (272)
+||+||+|+...+..||+.
T Consensus 76 ~Ea~fy~i~~l~~~~cc~~ 94 (105)
T 1nn7_A 76 EELAFFGLIPEIIGDCCYE 94 (105)
T ss_dssp HHHHHHTCCSCCBCHHHHH
T ss_pred HHHHHcCCCHHHHHHHHHH
Confidence 9999999999999999974
No 5
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=99.96 E-value=2.7e-30 Score=216.44 Aligned_cols=98 Identities=22% Similarity=0.409 Sum_probs=90.9
Q ss_pred CCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCH
Q psy968 163 TSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSV 242 (272)
Q Consensus 163 ~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~ 242 (272)
..+++|+|||||++|+|+++||+++|+||||+. +....+++++|+||||| ||.+|++||||||+|+|++|+++|.
T Consensus 32 ~~~~~V~LNVGG~~F~T~~~TL~~~P~S~L~~~---~~~~~~~~~~g~yFiDR--dp~~F~~ILnflR~G~l~~p~~~~~ 106 (140)
T 2nz0_B 32 RQDELIVLNVSGRRFQTWRTTLERYPDTLLGST---EKEFFFNEDTKEYFFDR--DPEVFRCVLNFYRTGKLHYPRYECI 106 (140)
T ss_dssp TCCCEEEEEETTEEEEEEHHHHHTCTTSTTTSG---GGGGSEETTTTEEEECS--CHHHHHHHHHHHHHSSBCCCTTSCH
T ss_pred CCCCEEEEEECCEEEEeeHHHHhcCCCeeeccc---CCcccccCCCCeEEEeC--CcHHHHHHHHHHhcCCcCCCCCcCH
Confidence 367999999999999999999999999999992 22345789999999999 9999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCccccccc
Q psy968 243 QELREACDYLLVPFDAHTVRCQN 265 (272)
Q Consensus 243 ~~f~eE~~Ff~Ip~~~~~~cC~~ 265 (272)
..|++|++||+|+...+..||+.
T Consensus 107 ~~l~eEa~fy~i~~l~l~~CC~~ 129 (140)
T 2nz0_B 107 SAYDDELAFYGILPEIIGDCCYE 129 (140)
T ss_dssp HHHHHHHHHHTCCGGGBCTTTHH
T ss_pred HHHHHHHHHcCCChHHHHHHHHH
Confidence 99999999999999999999974
No 6
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=99.95 E-value=4.5e-29 Score=198.38 Aligned_cols=91 Identities=15% Similarity=0.316 Sum_probs=82.6
Q ss_pred CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCccc-CCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCH
Q psy968 164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFT-HTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSV 242 (272)
Q Consensus 164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~-~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~ 242 (272)
.+++|+|||||++|+|+++||.++|+|+||+||+.+...+ ..+++|+||||| ||.+|++||||||+|+|++|+++|.
T Consensus 4 ~~~~v~LNVGG~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fiDR--dp~~F~~IL~~lr~g~l~~p~~~~~ 81 (107)
T 3drz_A 4 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDR--DPTYFGPVLNYLRHGKLVINKDLAE 81 (107)
T ss_dssp -CCEEEEEETTEEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEECS--CHHHHHHHHHHHHHSCCCCCTTSCH
T ss_pred CCCEEEEEECCEEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEecC--ChHHHHHHHHHhCCCeeCCCCCCCH
Confidence 5689999999999999999999999999999998764433 235899999999 9999999999999999999999999
Q ss_pred HHHHHHHHhcCCCC
Q psy968 243 QELREACDYLLVPF 256 (272)
Q Consensus 243 ~~f~eE~~Ff~Ip~ 256 (272)
..|++||+||+|+.
T Consensus 82 ~~l~~Ea~fy~l~~ 95 (107)
T 3drz_A 82 EGVLEEAEFYNITS 95 (107)
T ss_dssp HHHHHHHHHHTCHH
T ss_pred HHHHHHHHHCCCHH
Confidence 99999999999963
No 7
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=99.93 E-value=1.5e-26 Score=204.76 Aligned_cols=90 Identities=16% Similarity=0.330 Sum_probs=81.7
Q ss_pred CCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCccc-CCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCH
Q psy968 164 SEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFT-HTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSV 242 (272)
Q Consensus 164 ~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~-~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~ 242 (272)
.+++|+|||||++|+|+++||.++|+|+||+||+.....+ ..+++|+||||| ||.+|++||||||+|+|++|+++|.
T Consensus 10 ~~~~V~LNVGG~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFIDR--DP~~F~~ILnyLRtG~L~lP~~~~~ 87 (202)
T 3drx_A 10 VSKWVRLNVGGTYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLIDR--DPTYFGPVLNYLRHGKLVINKDLAE 87 (202)
T ss_dssp CCCEEEEEETTEEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEECS--CSTTHHHHHHHHHHSCCCCCTTSCH
T ss_pred CCCEEEEEECCEEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEecC--ChHHHHHHHHHhcCCccCCCCCCCH
Confidence 4699999999999999999999999999999998654433 235799999999 9999999999999999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy968 243 QELREACDYLLVP 255 (272)
Q Consensus 243 ~~f~eE~~Ff~Ip 255 (272)
..|++||+||+|+
T Consensus 88 ~~l~eEA~FygL~ 100 (202)
T 3drx_A 88 EGVLEEAEFYNIT 100 (202)
T ss_dssp HHHHHHHHHTTCH
T ss_pred HHHHHHHHHCCcH
Confidence 9999999999995
No 8
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=99.91 E-value=5.5e-25 Score=214.47 Aligned_cols=95 Identities=24% Similarity=0.329 Sum_probs=85.0
Q ss_pred CCCCCcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC-CeeecCCCC
Q psy968 162 PTSEERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG-QVIKCPPSV 240 (272)
Q Consensus 162 p~~~~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT-GkLh~P~~v 240 (272)
+..+++|+|||||++|+|+++||+++|+|+||+|++.. ..|++++||||||| ||.+|++||||||| |+||+|+++
T Consensus 48 ~~~~~~v~lNVgG~~f~t~~~tL~~~p~s~l~~~~~~~--~~~~~~~~~~f~DR--~~~~F~~IL~~~r~~g~l~~p~~~ 123 (514)
T 2r9r_B 48 HESSERVVINISGLRFETQLKTLAQFPETLLGDPKKRM--RYFDPLRNEYFFDR--NRPSFDAILYYYQSGGRLRRPVNV 123 (514)
T ss_dssp ---CCEEEEEETTEEEEEEHHHHTTSTTSTTTCHHHHG--GGEETTTTEEEECS--CHHHHHHHHHHHHHTSCCCCCTTS
T ss_pred CCCCCEEEEEeCCEEEEecHHHHhcCCCCcccccccCC--cccCCCCCCEEEcC--ChHHHHHHHHHHhcCCccccCCcc
Confidence 34578999999999999999999999999999998642 35889999999999 99999999999999 999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcc
Q psy968 241 SVQELREACDYLLVPFDAHT 260 (272)
Q Consensus 241 c~~~f~eE~~Ff~Ip~~~~~ 260 (272)
|...|++|++||+|+...++
T Consensus 124 ~~~~~~~E~~f~~i~~~~~~ 143 (514)
T 2r9r_B 124 PLDIFSEEIRFYELGEEAME 143 (514)
T ss_dssp CHHHHHHHHHHTTCCHHHHH
T ss_pred cHHHHHHHHHhcCCCHHHHh
Confidence 99999999999999765543
No 9
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=98.22 E-value=1.6e-06 Score=67.93 Aligned_cols=85 Identities=14% Similarity=0.231 Sum_probs=70.3
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
.-|+|.|+|+.|.+.+..|..... ++.+||++++.. ..++.-+..++++.+|+.+|+|..||++.++. ..+..+
T Consensus 30 ~Dv~l~v~~~~~~aHk~iLaa~S~-~F~~~f~~~~~e----~~~~i~l~~~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~l 103 (127)
T 1r29_A 30 TDVVIVVSREQFRAHKTVLMACSG-LFYSIFTDQLKR----NLSVINLDPEINPEGFNILLDFMYTSRLNLRE-GNIMAV 103 (127)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCH-HHHHHHTSTTTT----TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCT-TTHHHH
T ss_pred CCEEEEECCEEEehHHHHHHHhCH-HHHHHhcCCccC----CCCEEEeCCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHH
Confidence 357889999999999999988754 999999876442 44556664668999999999999999998765 468899
Q ss_pred HHHHHhcCCCC
Q psy968 246 REACDYLLVPF 256 (272)
Q Consensus 246 ~eE~~Ff~Ip~ 256 (272)
+..+++|+++.
T Consensus 104 l~~A~~~~i~~ 114 (127)
T 1r29_A 104 MATAMYLQMEH 114 (127)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhCCHH
Confidence 99999999863
No 10
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=98.22 E-value=3.5e-06 Score=65.85 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=71.9
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
-|+|.|||+.|.+.+..|..... ++.+||.+.+. +..+..+..+|++..|+.+|+|..||++.++. ..+..+.
T Consensus 34 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~~-----e~~~i~l~~~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll 106 (125)
T 3ohu_A 34 DVTLIVERKEFRAHRAVLAACSE-YFWQALVGQTK-----NDLVVSLPEEVTARGFGPLLQFAYTAKLLLSR-ENIREVI 106 (125)
T ss_dssp CEEEEETTEEEEECHHHHHHHBH-HHHHHHTTCCC-----SSCEEECCTTCCHHHHHHHHHHHTTSEEEECT-TTHHHHH
T ss_pred ceEEEECCEEEechHHHHHHcCH-HHHHHhcCCCC-----CCcEEEeCCCCCHHHHHHHHHhHcCCceEECH-HHHHHHH
Confidence 37788999999999999998865 89999987543 14445554458999999999999999998877 4688999
Q ss_pred HHHHhcCCCCCCcccccc
Q psy968 247 EACDYLLVPFDAHTVRCQ 264 (272)
Q Consensus 247 eE~~Ff~Ip~~~~~~cC~ 264 (272)
+.+++|+|+. ....|++
T Consensus 107 ~~A~~l~i~~-L~~~C~~ 123 (125)
T 3ohu_A 107 RCAEFLRMHN-LEDSCFS 123 (125)
T ss_dssp HHHHHHTBSS-CTTSSCC
T ss_pred HHHHHhCCHH-HHHHHHH
Confidence 9999999974 3444543
No 11
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=98.11 E-value=3.7e-06 Score=66.33 Aligned_cols=90 Identities=14% Similarity=0.190 Sum_probs=69.9
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
-|+|.|||+.|.+.+..|..... ++.+||.+. ...+..+..++++.+|+.+|+|..||++.++. ..+..++
T Consensus 35 Dv~l~v~~~~~~~Hk~vLaa~S~-~F~~~f~~~-------~~~~i~l~~~~~~~~f~~ll~~iYtg~~~i~~-~~~~~ll 105 (129)
T 3ga1_A 35 DVSVVVKGHAFKAHRAVLAASSS-YFRDLFNNS-------RSAVVELPAAVQPQSFQQILSFCYTGRLSMNV-GDQDLLM 105 (129)
T ss_dssp CEEEEETTEEEEECHHHHHHHBH-HHHHHHHHC-------CCSEEECCTTCCHHHHHHHHHHHHHSEEECCT-TTHHHHH
T ss_pred ceEEEECCEEEEehHHHHHHcCH-HHHHHHcCC-------CCCEEEECCCCCHHHHHHHHHHHhCCccccCH-HHHHHHH
Confidence 37888999999999999998854 899998764 34455563368999999999999999998877 4588999
Q ss_pred HHHHhcCCCCCCcccccccc
Q psy968 247 EACDYLLVPFDAHTVRCQNL 266 (272)
Q Consensus 247 eE~~Ff~Ip~~~~~~cC~~l 266 (272)
+.+++|+|+.- ...|++-|
T Consensus 106 ~~A~~~~i~~l-~~~C~~~L 124 (129)
T 3ga1_A 106 YTAGFLQIQEI-MEKGTEFF 124 (129)
T ss_dssp HHHHHTTBTTS-SCC-----
T ss_pred HHHHHhCCHHH-HHHHHHHH
Confidence 99999999763 34455433
No 12
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=98.07 E-value=1.1e-06 Score=69.53 Aligned_cols=46 Identities=17% Similarity=0.354 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccc
Q psy968 24 SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRC 69 (272)
Q Consensus 24 s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c 69 (272)
++.+|+.||+||++|.+.+|+++++.+|++.++|+.|+-..-.--|
T Consensus 47 dp~~F~~ILnflR~g~l~~p~~~~~~~l~~Ea~fy~i~~l~~~~cc 92 (105)
T 1nn7_A 47 DPDIFRHILNFYRTGKLHYPRHECISAYDEELAFFGLIPEIIGDCC 92 (105)
T ss_dssp CTTTHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHHTCCSCCBCHHH
T ss_pred CcHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHH
Confidence 7889999999999999999999999999999999999987643334
No 13
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=98.05 E-value=1.4e-06 Score=68.80 Aligned_cols=40 Identities=20% Similarity=0.365 Sum_probs=37.3
Q ss_pred CchHHHHHHHHHHhhc-CcccCCCCCchHHHHHhhcccccc
Q psy968 22 CKSFKVFRAILDYYKG-QVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 22 ~~s~~~f~~ildyy~~-g~~~cp~~~sv~elreacdy~~i~ 61 (272)
.-++.+|+.||+||++ |.++||+++++.+|++.++|+.|+
T Consensus 47 DRdp~~F~~ILnflR~~G~l~~p~~~~~~~~~~Ea~fy~i~ 87 (100)
T 1t1d_A 47 DRNRPSFDAILYFYQSGGRLRRPVNVPLDVFSEEIKFYELG 87 (100)
T ss_dssp CSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHHHHHHHTTCC
T ss_pred cCChHHHHHHHHHHhcCCcccCCCCCCHHHHHHHHHHcCCC
Confidence 3478899999999999 999999999999999999999985
No 14
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=98.05 E-value=1.9e-06 Score=70.34 Aligned_cols=46 Identities=15% Similarity=0.343 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccc
Q psy968 24 SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRC 69 (272)
Q Consensus 24 s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c 69 (272)
++.+|+.||+||++|.+.||+++++.+|++-|+|+.|+...-.--|
T Consensus 60 dp~~F~~ILnflR~G~l~~p~~~~~~~l~~Ea~fy~i~~l~l~~cC 105 (124)
T 1s1g_A 60 DPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCC 105 (124)
T ss_dssp CHHHHHHHHHHHHHSCBCCCTTSCHHHHHHHHHHTTCCGGGBCHHH
T ss_pred ChHHHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHcCCChHHHHHHH
Confidence 7899999999999999999999999999999999999976533333
No 15
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=98.00 E-value=2.8e-06 Score=70.90 Aligned_cols=47 Identities=15% Similarity=0.323 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCccccc
Q psy968 24 SFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQ 70 (272)
Q Consensus 24 s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c~ 70 (272)
++.+|+.||+||++|.+.||+++++.+|++-++|+.|+...-.--|+
T Consensus 82 dp~~F~~ILnflR~G~l~~p~~~~~~~l~eEa~fy~i~~l~l~~CC~ 128 (140)
T 2nz0_B 82 DPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCY 128 (140)
T ss_dssp CHHHHHHHHHHHHHSSBCCCTTSCHHHHHHHHHHHTCCGGGBCTTTH
T ss_pred CcHHHHHHHHHHhcCCcCCCCCcCHHHHHHHHHHcCCChHHHHHHHH
Confidence 78999999999999999999999999999999999999876444453
No 16
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=97.99 E-value=8.3e-06 Score=62.93 Aligned_cols=81 Identities=19% Similarity=0.377 Sum_probs=66.6
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEec-cCCCccchHHHHhhHhCCeeecCCCCCHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVA-EGIPAAVFRAILDYYKGQVIKCPPSVSVQE 244 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFD-R~idp~vFr~ILnYYRTGkLh~P~~vc~~~ 244 (272)
.-|+|.|||++|.+.+..|..... ++.+||+++ .+++..++ .++++.+|+.+|+|..||++.++. ..+..
T Consensus 23 ~Dv~l~v~~~~~~aHk~vLaa~S~-yF~~~f~~~-------~~~~i~l~~~~~~~~~f~~ll~~~Yt~~~~~~~-~~v~~ 93 (116)
T 2vpk_A 23 CDCTIVIGEFQFKAHRNVLASFSE-YFGAIYRST-------SENNVFLDQSQVKADGFQKLLEFIYTGTLNLDS-WNVKE 93 (116)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCH-HHHHHHTTC-------CCSCEECCTTTCCHHHHHHHHHHHHHSCCCCCT-TTHHH
T ss_pred CcEEEEECCEEEeccHHHHhhcCH-HHHHHHcCC-------CCCeEEeecCCCCHHHHHHHHHHHcCCCcccCH-HHHHH
Confidence 347889999999999999987754 899999865 23344444 157999999999999999998766 46889
Q ss_pred HHHHHHhcCCC
Q psy968 245 LREACDYLLVP 255 (272)
Q Consensus 245 f~eE~~Ff~Ip 255 (272)
+...+++|+++
T Consensus 94 ll~~A~~~~i~ 104 (116)
T 2vpk_A 94 IHQAADYLKVE 104 (116)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHhCCH
Confidence 99999999985
No 17
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=97.97 E-value=7.4e-06 Score=63.90 Aligned_cols=79 Identities=18% Similarity=0.252 Sum_probs=65.7
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
-|+|.|||+.|...+..|..... ++.+||++++ .++.-+ .++++.+|+.+|+|..||++.++. ..+..+.
T Consensus 26 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~-------~~~i~l-~~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll 95 (119)
T 3b84_A 26 DATLDVGGLVFKAHWSVLACCSH-FFQSLYGDGS-------GGSVVL-PAGFAEIFGLLLDFFYTGHLALTS-GNRDQVL 95 (119)
T ss_dssp CEEEEETTEEEEECHHHHHHHCH-HHHHHHTTTT-------CCCEEE-CGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHH
T ss_pred ceEEEECCEEEEeeHHHHhhcCH-HHHHHHCCCC-------CCeEEe-CCCCHHHHHHHHHHHcCCCCccCH-HHHHHHH
Confidence 47788999999999999998754 8999998653 234444 357999999999999999998776 4588999
Q ss_pred HHHHhcCCC
Q psy968 247 EACDYLLVP 255 (272)
Q Consensus 247 eE~~Ff~Ip 255 (272)
..+++|+++
T Consensus 96 ~~A~~~~i~ 104 (119)
T 3b84_A 96 LAARELRVP 104 (119)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHhCcH
Confidence 999999995
No 18
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=97.97 E-value=7.8e-06 Score=64.22 Aligned_cols=92 Identities=14% Similarity=0.182 Sum_probs=71.3
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
--|+|.|||++|...+..|..... ++.+||++++. +..+.-+..+|++..|+.+|+|..||++.++. ..+..+
T Consensus 30 ~Dv~l~v~~~~~~aHk~vLaa~S~-yF~~mf~~~~~-----e~~~i~l~~~v~~~~f~~lL~~iYtg~~~i~~-~~v~~l 102 (124)
T 2ihc_A 30 CDVTIFVEGQRFRAHRSVLAACSS-YFHSRIVGQAD-----GELNITLPEEVTVKGFEPLIQFAYTAKLILSK-ENVDEV 102 (124)
T ss_dssp CCEEEEETTEEEEECHHHHHHHBH-HHHHHHTTC--------CEEEECCTTSCHHHHHHHHHHHHHSEEEEET-TTHHHH
T ss_pred cCEEEEECCEEEecHHHHHHHcCH-HHHHHHcCCCC-----CCceEeecCCcCHHHHHHHHHHhcCCCcccCH-HHHHHH
Confidence 347789999999999999987754 89999987542 12334443478999999999999999998876 458899
Q ss_pred HHHHHhcCCCCCCccccccc
Q psy968 246 REACDYLLVPFDAHTVRCQN 265 (272)
Q Consensus 246 ~eE~~Ff~Ip~~~~~~cC~~ 265 (272)
+..+++|+++.- ...|++-
T Consensus 103 l~~A~~~~~~~L-~~~C~~~ 121 (124)
T 2ihc_A 103 CKCVEFLSVHNI-EESCFQF 121 (124)
T ss_dssp HHHHHHHTBSSC-CGGGGGT
T ss_pred HHHHHHHCCHHH-HHHHHHH
Confidence 999999999753 4455543
No 19
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=97.93 E-value=8.2e-06 Score=63.15 Aligned_cols=85 Identities=19% Similarity=0.401 Sum_probs=65.5
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
.-|+|.|||+.|.+.+..|..... ++.+||++++.. ....+.-+ .++++.+|+.+|+|..||++.++. ..+..+
T Consensus 26 ~Dv~l~v~~~~~~aHk~vLaa~S~-~F~~~f~~~~~e---~~~~~i~l-~~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~l 99 (120)
T 2if5_A 26 CDVVILVEGREFPTHRSVLAACSQ-YFKKLFTSGAVV---DQQNVYEI-DFVSAEALTALMDFAYTATLTVST-ANVGDI 99 (120)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCH-HHHHHHHC--------CCSEEEC-CSSCHHHHHHHHHHHHHSCCCCCG-GGHHHH
T ss_pred CCeEEEECCEEEeHHHHHHHHhCH-HHHHHhcCCccc---cCCceEEe-CCCCHHHHHHHHHHHcCCCCccCH-HHHHHH
Confidence 457888999999999999998754 899999876432 22233333 468999999999999999998765 357889
Q ss_pred HHHHHhcCCCC
Q psy968 246 REACDYLLVPF 256 (272)
Q Consensus 246 ~eE~~Ff~Ip~ 256 (272)
...+++|+++.
T Consensus 100 l~~A~~~~i~~ 110 (120)
T 2if5_A 100 LSAARLLEIPA 110 (120)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhCCHH
Confidence 99999999863
No 20
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=97.88 E-value=4.5e-06 Score=67.32 Aligned_cols=48 Identities=19% Similarity=0.353 Sum_probs=43.4
Q ss_pred chHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCccccc
Q psy968 23 KSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQ 70 (272)
Q Consensus 23 ~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c~ 70 (272)
-++.+|+.||+||++|.+.+|+++++.++++.++|+.|+-..-.--|+
T Consensus 52 Rdp~~F~~ILnylR~G~l~~p~~~~~~~~~~Ea~fy~i~~~~l~~CC~ 99 (115)
T 3kvt_A 52 RHPGVFAQIINYYRSGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCW 99 (115)
T ss_dssp SCTTTHHHHHHHHHHSCBCCCSSSCHHHHHHHHHHHTCCGGGBCGGGS
T ss_pred cChHHHHHHHHHhcCCCCCCCCcccHHHHHHHHHHhCCChHHHHHHHH
Confidence 478999999999999999999999999999999999999876555565
No 21
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=97.88 E-value=1.5e-05 Score=63.71 Aligned_cols=93 Identities=15% Similarity=0.196 Sum_probs=71.9
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
--|+|.|||+.|...+..|..... ++.+||.+.+. +..+.-+..+|++..|+.+|+|..||++.++. ..+..+
T Consensus 37 ~Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~~-----e~~~i~l~~~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~l 109 (138)
T 2z8h_A 37 CDVTVLVEGQRFRAHRSVLAACSS-YFHSRIVGQTD-----AELTVTLPEEVTVKGFEPLIQFAYTAKLILSK-DNVDEV 109 (138)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCH-HHHHHHTTCCC-----TTEEEECCTTSCHHHHHHHHHHHHHSCCCCCT-TTHHHH
T ss_pred cCeEEEECCEEEechHHHHHHcCH-HHHHHHhcCCC-----CCceEEeCCCCCHHHHHHHHHHhcCCCcccCH-HHHHHH
Confidence 347788999999999999988755 99999987543 12334443478999999999999999998876 458899
Q ss_pred HHHHHhcCCCCCCcccccccc
Q psy968 246 REACDYLLVPFDAHTVRCQNL 266 (272)
Q Consensus 246 ~eE~~Ff~Ip~~~~~~cC~~l 266 (272)
+..+++|+++. ....|++-+
T Consensus 110 l~~A~~~~i~~-L~~~C~~~l 129 (138)
T 2z8h_A 110 CRCVEFLSVHN-IEESCFQFL 129 (138)
T ss_dssp HHHHHHHTCGG-GHHHHHHHT
T ss_pred HHHHHHhCCHH-HHHHHHHHH
Confidence 99999999974 334444433
No 22
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=97.87 E-value=1.2e-05 Score=64.18 Aligned_cols=87 Identities=18% Similarity=0.226 Sum_probs=67.1
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
-|+|.|+|++|.+.+..|..... ++.+||..++ +++.-+ .+|++.+|+.+|+|..||++.++. ..+..++
T Consensus 27 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~mf~~~~-------~~~i~l-~~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll 96 (135)
T 2yy9_A 27 DATLDVGGLVFKAHWSVLACCSH-FFQRIYGDGT-------GGSVVL-PAGFAEIFGLLLDFFYTGHLALTS-GNRDQVL 96 (135)
T ss_dssp CEEEEETTEEEEECHHHHHHHCH-HHHHTCC-----------CCEEE-CGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHH
T ss_pred ceEEEECCEEEehHHHHHHHhCH-HHHHHHcCCC-------CCeEEe-CCCCHHHHHHHHHHHhCCCCCCCH-HHHHHHH
Confidence 47788999999999999998854 8999998653 334444 357999999999999999998876 4588999
Q ss_pred HHHHhcCCCCCCcccccc
Q psy968 247 EACDYLLVPFDAHTVRCQ 264 (272)
Q Consensus 247 eE~~Ff~Ip~~~~~~cC~ 264 (272)
..+++|+|+. ....|++
T Consensus 97 ~~A~~l~i~~-L~~~C~~ 113 (135)
T 2yy9_A 97 LAAKELRVPE-AVELCQS 113 (135)
T ss_dssp HHHHHTTCHH-HHHHHHH
T ss_pred HHHHHhCcHH-HHHHHHH
Confidence 9999999953 3334443
No 23
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=97.87 E-value=6.2e-06 Score=64.95 Aligned_cols=40 Identities=10% Similarity=0.250 Sum_probs=37.6
Q ss_pred CchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 22 CKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 22 ~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
.-++.+|+.||+||++|.+.||+++++.+|.+.++|+.|+
T Consensus 55 DRdp~~F~~IL~~lr~g~l~~p~~~~~~~l~~Ea~fy~l~ 94 (107)
T 3drz_A 55 DRDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNIT 94 (107)
T ss_dssp CSCHHHHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHHTCH
T ss_pred cCChHHHHHHHHHhCCCeeCCCCCCCHHHHHHHHHHCCCH
Confidence 4589999999999999999999999999999999999875
No 24
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=97.85 E-value=2e-05 Score=63.91 Aligned_cols=87 Identities=23% Similarity=0.309 Sum_probs=67.2
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
--|+|.|||+.|.+.+..|..... ++.+||++++.. ......+.-+ .+|++.+|+.+|+|..||++.++. ..+..+
T Consensus 48 ~Dv~l~v~~~~f~aHk~vLaa~S~-yF~~mf~~~~~e-~e~~~~~I~l-~~v~~~~f~~lL~fiYtg~~~i~~-~~v~~l 123 (144)
T 2ppi_A 48 CDAHLVLDGEEIPVQKNILAAASP-YIRTKLNYNPPK-DDGSTYKIEL-EGISVMVMREILDYIFSGQIRLNE-DTIQDV 123 (144)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCH-HHHHHHHHCC------CCCEEEC-CSSCHHHHHHHHHHHTTSCCCCCT-TTHHHH
T ss_pred cceEEEECCEEEehHHHHHHHcCH-HHHHHHcCCCcc-ccCCCcEEEe-CCCCHHHHHHHHHHHhCCCCCCCH-HHHHHH
Confidence 357889999999999999998754 899999865431 1122334444 458999999999999999997765 468899
Q ss_pred HHHHHhcCCCC
Q psy968 246 REACDYLLVPF 256 (272)
Q Consensus 246 ~eE~~Ff~Ip~ 256 (272)
+..+++|+++.
T Consensus 124 l~~A~~l~i~~ 134 (144)
T 2ppi_A 124 VQAADLLLLTD 134 (144)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhCcHH
Confidence 99999999853
No 25
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=97.81 E-value=2.8e-05 Score=58.89 Aligned_cols=84 Identities=18% Similarity=0.190 Sum_probs=65.1
Q ss_pred CcEEEeeCC----eEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCC
Q psy968 166 ERVTLVVDN----TRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVS 241 (272)
Q Consensus 166 ~rV~LNVGG----~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc 241 (272)
.-|+|.||| +.|.+.+..|..... ++.+||++++.. ..++.-+ .++++.+|+.+|+|..||++.++. ..
T Consensus 9 ~Dv~l~v~~~~~~~~~~~Hk~iLa~~S~-~F~~~f~~~~~e----~~~~i~l-~~~~~~~f~~~l~~iYt~~~~~~~-~~ 81 (109)
T 2vkp_A 9 ADVHFVVGPPGATRTVPAHKYVLAVGSS-VFYAMFYGDLAE----VKSEIHI-PDVEPAAFLILLKYMYSDEIDLEA-DT 81 (109)
T ss_dssp CCEEEEESSTTSCEEEEECHHHHHHHCH-HHHHHHC----------CCEEEE-TTSCHHHHHHHHHHHHHCCCCCCT-TT
T ss_pred ccEEEEECCCCCcEEEEeeHHHHHHcCH-HHHHHhcCCccc----CCCeEEe-CCCCHHHHHHHHHHHcCCCccCCH-HH
Confidence 347888998 999999999987754 999999876432 1244555 457999999999999999998877 45
Q ss_pred HHHHHHHHHhcCCCC
Q psy968 242 VQELREACDYLLVPF 256 (272)
Q Consensus 242 ~~~f~eE~~Ff~Ip~ 256 (272)
+..+...+++|+++.
T Consensus 82 ~~~ll~~A~~~~~~~ 96 (109)
T 2vkp_A 82 VLATLYAAKKYIVPA 96 (109)
T ss_dssp HHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHhCcHH
Confidence 788999999999863
No 26
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=97.78 E-value=1.5e-05 Score=62.12 Aligned_cols=80 Identities=18% Similarity=0.289 Sum_probs=64.9
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
.-|+|.|||+.|...+..|..... ++.+||+++... .-+ .++++.+|+.+|+|..||++.++. ..+..+
T Consensus 28 ~Dv~l~v~~~~~~aHk~vLaa~S~-yF~~~f~~~~~~--------i~l-~~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~l 96 (119)
T 2q81_A 28 CDCTFVVDGVHFKAHKAVLAACSE-YFKMLFVDQKDV--------VHL-DISNAAGLGQVLEFMYTAKLSLSP-ENVDDV 96 (119)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCH-HHHHHHHHCCSG--------GGG-GGCCHHHHHHHHHHHHHSCCCCCT-TTHHHH
T ss_pred cceEEEECCEEEehhHHHHHHcCH-HHHHHHcCCCCE--------EEe-CCCCHHHHHHHHHHHcCCCCccCH-HHHHHH
Confidence 347788999999999999988755 899998864221 112 346899999999999999998877 458899
Q ss_pred HHHHHhcCCCC
Q psy968 246 REACDYLLVPF 256 (272)
Q Consensus 246 ~eE~~Ff~Ip~ 256 (272)
...+++|+++.
T Consensus 97 l~~A~~l~i~~ 107 (119)
T 2q81_A 97 LAVATFLQMQD 107 (119)
T ss_dssp HHHHHHTTCHH
T ss_pred HHHHHHhCCHH
Confidence 99999999863
No 27
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=97.77 E-value=1.3e-05 Score=62.50 Aligned_cols=80 Identities=18% Similarity=0.363 Sum_probs=65.1
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
.-|+|.|||+.|.+.+..|..... ++.+||+++. .+.-+ .++++.+|+.+|+|..||++.+++ ..+..+
T Consensus 29 ~Dv~l~v~~~~f~aHk~vLaa~S~-yF~~~f~~~~--------~~i~l-~~~~~~~f~~ll~~~Ytg~~~~~~-~~~~~l 97 (121)
T 1buo_A 29 CDVVIMVDSQEFHAHRTVLACTSK-MFEILFHRNS--------QHYTL-DFLSPKTFQQILEYAYTATLQAKA-EDLDDL 97 (121)
T ss_dssp CCEEEEESSCEEEECHHHHHHHCH-HHHHHTTSCC--------SEEEE-CSSCHHHHHHHHHHHHHSCCCCCG-GGHHHH
T ss_pred CCEEEEECCEEEehhHHHHhhcCH-HHHHHHcCCC--------cEEEe-CCCCHHHHHHHHHhhcCCCcCCCH-HHHHHH
Confidence 347788999999999999987754 8999987642 23333 468999999999999999998776 457889
Q ss_pred HHHHHhcCCCC
Q psy968 246 REACDYLLVPF 256 (272)
Q Consensus 246 ~eE~~Ff~Ip~ 256 (272)
...+++|+++.
T Consensus 98 l~~A~~~~i~~ 108 (121)
T 1buo_A 98 LYAAEILEIEY 108 (121)
T ss_dssp HHHHHHHTCHH
T ss_pred HHHHHHHCCHH
Confidence 99999999853
No 28
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=97.76 E-value=1.9e-05 Score=61.71 Aligned_cols=78 Identities=24% Similarity=0.356 Sum_probs=63.4
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCee-ecCCCCCHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVI-KCPPSVSVQEL 245 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkL-h~P~~vc~~~f 245 (272)
-|+|.|||+.|...+..|..... ++.+||.++ .++.-+ .+|++.+|+.+|+|..||++ .++. ..+..+
T Consensus 33 Dv~l~v~~~~f~aHk~vLaa~S~-~F~~~f~~~--------~~~i~l-~~~~~~~f~~~l~~~Ytg~~~~~~~-~~~~~l 101 (116)
T 3fkc_A 33 DVTVIVEDRKFRAHKNILSASST-YFHQLFSVA--------GQVVEL-SFIRAEIFAEILNYIYSSKIVRVRS-DLLDEL 101 (116)
T ss_dssp CEEEEETTEEEEECHHHHHHHCH-HHHHHTTSC--------CSEEEE-CSSCHHHHHHHHHHHTTSCCCSCCH-HHHHHH
T ss_pred eEEEEECCEEEehhHHHHHHcCH-HHHHHHcCC--------CCEEEe-CCCCHHHHHHHHHhhcCCCcCCCCH-HHHHHH
Confidence 47788999999999999988755 899998764 234444 46899999999999999998 4444 346789
Q ss_pred HHHHHhcCCC
Q psy968 246 REACDYLLVP 255 (272)
Q Consensus 246 ~eE~~Ff~Ip 255 (272)
++.+++|+|+
T Consensus 102 l~~A~~l~i~ 111 (116)
T 3fkc_A 102 IKSGQLLGVK 111 (116)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHhCcc
Confidence 9999999985
No 29
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=97.70 E-value=4.4e-05 Score=66.27 Aligned_cols=86 Identities=23% Similarity=0.330 Sum_probs=63.5
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
--|+|.|||+.|...+..|..... ++.+||++++.. ......+.-+ .+|++.+|+.+|+|..||++.++. ..+..+
T Consensus 32 ~Dv~l~v~~~~f~~Hr~vLaa~S~-yF~~mf~~~~~~-~e~~~~~i~l-~~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~l 107 (256)
T 3hve_A 32 CDAHLVLDGEEIPVQKNILAAASP-YIRTKLNYNPPK-DDGSTYKIEL-EGISVMVMREILDYIFSGQIRLNE-DTIQDV 107 (256)
T ss_dssp CCEEEEETTEEEEECHHHHHTTCH-HHHHTC------------CEEEC-SSCCHHHHHHHHHHHHHSCCCCC--CCHHHH
T ss_pred cceEEEECCEEEechHHHHHHcCH-HHHHHhCCCCCc-ccCCCCeEEe-CCCCHHHHHHHHhhccCCCCcccH-hHHHHH
Confidence 347888999999999999998855 999999865431 1122233333 468999999999999999998776 568899
Q ss_pred HHHHHhcCCC
Q psy968 246 REACDYLLVP 255 (272)
Q Consensus 246 ~eE~~Ff~Ip 255 (272)
...+++|+++
T Consensus 108 l~~A~~l~i~ 117 (256)
T 3hve_A 108 VQAADLLLLT 117 (256)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHHChH
Confidence 9999999986
No 30
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=97.68 E-value=3.6e-05 Score=62.29 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=67.2
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
-|+|.|||+.|.+.+..|..... ++.+||++++.. ..+++.-+. ++++.+|+.+|+|..||++..+. ..+..+.
T Consensus 36 Dv~l~v~~~~~~~Hk~iL~~~S~-~F~~~f~~~~~e---~~~~~i~l~-~~~~~~f~~~l~~~Yt~~~~~~~-~~~~~ll 109 (172)
T 3htm_A 36 DCCLCVAGQEFQAHKAILAARSP-VFSAMFEHEMEE---SKKNRVEIN-DVEPEVFKEMMCFIYTGKAPNLD-KMADDLL 109 (172)
T ss_dssp CEEEEETTEEEEECHHHHHHHCH-HHHHHHHSCCCG---GGTTEEEEC-SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHH
T ss_pred ceEEEECCEEEEeeHHHHHHcCH-HHHHHHccCccc---cCCCeEEec-CCCHHHHHHHHHHHhCCCCCCcH-HHHHHHH
Confidence 47888999999999999988754 999999876432 233455554 57999999999999999997655 4577899
Q ss_pred HHHHhcCCC
Q psy968 247 EACDYLLVP 255 (272)
Q Consensus 247 eE~~Ff~Ip 255 (272)
+.+++|+++
T Consensus 110 ~~A~~~~~~ 118 (172)
T 3htm_A 110 AAADKYALE 118 (172)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHhCcH
Confidence 999999985
No 31
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=97.58 E-value=0.0001 Score=58.27 Aligned_cols=86 Identities=22% Similarity=0.395 Sum_probs=64.7
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
-|+|.|||+.|...+..|....+ ++.+ ++.-..-.+|++.+|+.+|+|..||++.++. ..+..++
T Consensus 32 Dv~l~v~~~~f~aHk~vLaa~S~-yF~~-------------~~~~i~l~~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll 96 (119)
T 3m5b_A 32 DTLITVGSQEFPAHSLVLAGVSQ-QLGR-------------RGQWALGEGISPSTFAQLLNFVYGESVELQP-GELRPLQ 96 (119)
T ss_dssp CEEEEETTEEEEECHHHHHTTCG-GGCC-------------CEEEECCSSCCHHHHHHHHHHHTTCCEEECG-GGHHHHH
T ss_pred ceEEEECCEEEeeEHHHHHHcCH-HHhc-------------CCCEEEeCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHHH
Confidence 47788999999999999988754 4332 1122334578999999999999999998876 4588999
Q ss_pred HHHHhcCCCCCCcccccccccc
Q psy968 247 EACDYLLVPFDAHTVRCQNLRR 268 (272)
Q Consensus 247 eE~~Ff~Ip~~~~~~cC~~l~~ 268 (272)
+.+++|+|+. ....||+-++.
T Consensus 97 ~aA~~l~i~~-l~~~C~~~~~~ 117 (119)
T 3m5b_A 97 EAARALGVQS-LEEACWRARGD 117 (119)
T ss_dssp HHHHHTTCHH-HHHHHHHHC--
T ss_pred HHHHHhCCHH-HHHHHHHHHhh
Confidence 9999999964 34556655544
No 32
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=97.54 E-value=3.7e-05 Score=60.53 Aligned_cols=83 Identities=17% Similarity=0.241 Sum_probs=66.0
Q ss_pred cEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHHH
Q psy968 167 RVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQELR 246 (272)
Q Consensus 167 rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f~ 246 (272)
-|+|.|||+.|.+.+..|..... ++.+||++++.. ..+++.-+. ++++..|+.+|+|..||++..+. .....+.
T Consensus 27 Dv~l~v~~~~~~~Hk~iL~~~S~-~F~~~f~~~~~e---~~~~~i~l~-~~~~~~~~~~l~~~Y~~~~~~~~-~~~~~ll 100 (145)
T 4eoz_A 27 DCCLCVAGQEFQAHKAILAARSP-VFSAMFEHEMEE---SKKNRVEIN-DVEPEVFKEMMCFIYTGKAPNLD-KMADDLL 100 (145)
T ss_dssp CEEEEETTEEEEECHHHHHHHCH-HHHHHHHSSSHH---HHHTEEEEC-SSCHHHHHHHHHHHHHSCCTTGG-GTHHHHH
T ss_pred ceEEEECCEEEEeehHHHHHcCH-HHHHHHcCCCcC---CCCceEEec-CCCHHHHHHHHHhhccCccCCcH-HHHHHHH
Confidence 47788999999999999988754 999999876431 123445554 47999999999999999997655 3477899
Q ss_pred HHHHhcCCC
Q psy968 247 EACDYLLVP 255 (272)
Q Consensus 247 eE~~Ff~Ip 255 (272)
+.+++|+++
T Consensus 101 ~~A~~~~~~ 109 (145)
T 4eoz_A 101 AAADKYALE 109 (145)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHhCHH
Confidence 999999985
No 33
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=97.52 E-value=9.7e-05 Score=65.04 Aligned_cols=84 Identities=20% Similarity=0.290 Sum_probs=64.6
Q ss_pred cEEEeeC---CeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEecc-----CCCccchHHHHhhHhCCeeecCC
Q psy968 167 RVTLVVD---NTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAE-----GIPAAVFRAILDYYKGQVIKCPP 238 (272)
Q Consensus 167 rV~LNVG---G~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR-----~idp~vFr~ILnYYRTGkLh~P~ 238 (272)
-|+|.|| |+.|...+..|..... ++.+||++++.. ..+++.-+.. +|++.+|+.+|+|..||++.++.
T Consensus 34 Dv~l~v~~~~~~~f~~Hr~vLaa~S~-yF~~mf~~~~~e---~~~~~i~l~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~ 109 (279)
T 3i3n_A 34 DITLCFGGAGGREFRAHRSVLAAATE-YFTPLLSGQFSE---SRSGRVEMRKWSSEPGPEPDTVEAVIEYMYTGRIRVST 109 (279)
T ss_dssp CEEEECC----CEEEECHHHHHHHCT-TSGGGCCC-----------EEECCCCSSTTCSCHHHHHHHHHHHHHSEEEEET
T ss_pred CeEEEEcCCCCeEEehHHHHHHHcCH-HHHHHhcCCCcc---ccCCeEEeccccccCCCCHHHHHHHHHhhCcCCcccCH
Confidence 4788998 9999999999998865 999999876432 2334555531 78999999999999999998877
Q ss_pred CCCHHHHHHHHHhcCCC
Q psy968 239 SVSVQELREACDYLLVP 255 (272)
Q Consensus 239 ~vc~~~f~eE~~Ff~Ip 255 (272)
..+..+...+++|+++
T Consensus 110 -~~v~~ll~~A~~l~i~ 125 (279)
T 3i3n_A 110 -GSVHEVLELADRFLLI 125 (279)
T ss_dssp -TTHHHHHHHHHHTTCH
T ss_pred -HHHHHHHHHHHHHCcH
Confidence 4588999999999985
No 34
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.30 E-value=6.6e-05 Score=66.42 Aligned_cols=39 Identities=10% Similarity=0.284 Sum_probs=36.7
Q ss_pred chHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 23 KSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 23 ~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
-++.+|+.||+||++|.+.||+++++.+|.+-++|+-|+
T Consensus 62 RDP~~F~~ILnyLRtG~L~lP~~~~~~~l~eEA~FygL~ 100 (202)
T 3drx_A 62 RDPTYFGPVLNYLRHGKLVINKDLAEEGVLEEAEFYNIT 100 (202)
T ss_dssp SCSTTHHHHHHHHHHSCCCCCTTSCHHHHHHHHHHTTCH
T ss_pred CChHHHHHHHHHhcCCccCCCCCCCHHHHHHHHHHCCcH
Confidence 478899999999999999999999999999999999884
No 35
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=96.87 E-value=0.00044 Score=61.50 Aligned_cols=84 Identities=17% Similarity=0.253 Sum_probs=64.9
Q ss_pred CcEEEeeCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCeeecCCCCCHHHH
Q psy968 166 ERVTLVVDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVIKCPPSVSVQEL 245 (272)
Q Consensus 166 ~rV~LNVGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkLh~P~~vc~~~f 245 (272)
.-|+|.|+|+.|.+.+..|..... .+.+||.+.+. ....++.-++ +++|.+|+.+|+|..||++..+. ..+..+
T Consensus 175 ~Dv~l~v~~~~f~~Hk~vLaa~S~-~F~~~f~~~~~---e~~~~~i~l~-~~~~~~f~~~L~~iYt~~~~~~~-~~~~~l 248 (312)
T 3hqi_A 175 TDCCLCVAGQEFQAHKAILAARSP-VFSAMFEHEME---ESKKNRVEIN-DVEPEVFKEMMCFIYTGKAPNLD-KMADDL 248 (312)
T ss_dssp CCEEEEETTEEEEECHHHHHHHCH-HHHHHTTC--------CCSEEEEC-SSCHHHHHHHHHHHHHSCCTTHH-HHHHHH
T ss_pred CceEEEECCEEEeHHHHHHHHcCH-HHHHHhccCcc---ccCCceEEec-CCCHHHHHHHHHhhcCCCCCChH-HHHHHH
Confidence 348889999999999999988754 89999986543 2334556664 58999999999999999985544 346788
Q ss_pred HHHHHhcCCC
Q psy968 246 REACDYLLVP 255 (272)
Q Consensus 246 ~eE~~Ff~Ip 255 (272)
+..+++|+++
T Consensus 249 l~~A~~~~~~ 258 (312)
T 3hqi_A 249 LAAADKYALE 258 (312)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHhCHH
Confidence 9999999985
No 36
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=96.36 E-value=0.0018 Score=63.12 Aligned_cols=40 Identities=23% Similarity=0.374 Sum_probs=37.3
Q ss_pred CchHHHHHHHHHHhhc-CcccCCCCCchHHHHHhhcccccc
Q psy968 22 CKSFKVFRAILDYYKG-QVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 22 ~~s~~~f~~ildyy~~-g~~~cp~~~sv~elreacdy~~i~ 61 (272)
.=++.+|+.||+||++ |.++||+++++..+.|-++|+-|+
T Consensus 98 DR~~~~F~~IL~~~r~~g~l~~p~~~~~~~~~~E~~f~~i~ 138 (514)
T 2r9r_B 98 DRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELG 138 (514)
T ss_dssp CSCHHHHHHHHHHHHHTSCCCCCTTSCHHHHHHHHHHTTCC
T ss_pred cCChHHHHHHHHHHhcCCccccCCcccHHHHHHHHHhcCCC
Confidence 4578999999999999 999999999999999999999885
No 37
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=90.89 E-value=0.27 Score=37.79 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=34.1
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.-+ .-.+.+|-+|+|++.||
T Consensus 67 l~~~~~~~f~~ll~~~Ytg~~~~~-~~~~~~ll~~A~~~~i~ 107 (121)
T 1buo_A 67 LDFLSPKTFQQILEYAYTATLQAK-AEDLDDLLYAAEILEIE 107 (121)
T ss_dssp ECSSCHHHHHHHHHHHHHSCCCCC-GGGHHHHHHHHHHHTCH
T ss_pred eCCCCHHHHHHHHHhhcCCCcCCC-HHHHHHHHHHHHHHCCH
Confidence 468999999999999888888643 46789999999998774
No 38
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=90.83 E-value=0.15 Score=39.87 Aligned_cols=42 Identities=24% Similarity=0.248 Sum_probs=36.3
Q ss_pred cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
...||++.+|+++|+|--||.+.-++ -.|.+|-+|+|+|.|+
T Consensus 64 ~l~~v~~~~f~~ll~fiYtg~~~i~~-~~v~~ll~aA~~l~i~ 105 (119)
T 3m5b_A 64 LGEGISPSTFAQLLNFVYGESVELQP-GELRPLQEAARALGVQ 105 (119)
T ss_dssp CCSSCCHHHHHHHHHHHTTCCEEECG-GGHHHHHHHHHHTTCH
T ss_pred EeCCCCHHHHHHHHHHHcCCCcCcCH-HHHHHHHHHHHHhCCH
Confidence 45799999999999998899887644 5799999999999885
No 39
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=89.78 E-value=0.24 Score=37.61 Aligned_cols=40 Identities=25% Similarity=0.348 Sum_probs=34.3
Q ss_pred cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
.++++.+|+++|+|--+|.+.=+ .-.+.+|-+|+|++.||
T Consensus 65 ~~~~~~~f~~ll~~~Yt~~~~~~-~~~v~~ll~~A~~~~i~ 104 (116)
T 2vpk_A 65 SQVKADGFQKLLEFIYTGTLNLD-SWNVKEIHQAADYLKVE 104 (116)
T ss_dssp TTCCHHHHHHHHHHHHHSCCCCC-TTTHHHHHHHHHHTTCH
T ss_pred CCCCHHHHHHHHHHHcCCCcccC-HHHHHHHHHHHHHhCCH
Confidence 38999999999999888988744 45799999999999874
No 40
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=89.55 E-value=0.28 Score=38.05 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=35.9
Q ss_pred cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccC
Q psy968 21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPF 62 (272)
Q Consensus 21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f 62 (272)
.++++.+|+++|+|--+|.+.-++. .+.+|-+|+|+|-|+-
T Consensus 75 ~~~~~~~f~~ll~~iYtg~~~i~~~-~~~~ll~~A~~~~i~~ 115 (129)
T 3ga1_A 75 AAVQPQSFQQILSFCYTGRLSMNVG-DQDLLMYTAGFLQIQE 115 (129)
T ss_dssp TTCCHHHHHHHHHHHHHSEEECCTT-THHHHHHHHHHTTBTT
T ss_pred CCCCHHHHHHHHHHHhCCccccCHH-HHHHHHHHHHHhCCHH
Confidence 4899999999999988898877554 6999999999999875
No 41
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=88.60 E-value=0.33 Score=37.28 Aligned_cols=41 Identities=20% Similarity=0.231 Sum_probs=34.6
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|++.||
T Consensus 64 l~~~~~~~f~~ll~~iYtg~~~~~~-~~v~~ll~~A~~~~i~ 104 (119)
T 3b84_A 64 LPAGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAARELRVP 104 (119)
T ss_dssp ECGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred eCCCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCcH
Confidence 4589999999999998889887443 5689999999999875
No 42
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=88.31 E-value=0.35 Score=37.08 Aligned_cols=42 Identities=12% Similarity=0.236 Sum_probs=35.7
Q ss_pred cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
...++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|+|.|+
T Consensus 65 ~l~~~~~~~f~~ll~~~Ytg~~~i~~-~~~~~ll~~A~~l~i~ 106 (119)
T 2q81_A 65 HLDISNAAGLGQVLEFMYTAKLSLSP-ENVDDVLAVATFLQMQ 106 (119)
T ss_dssp GGGGCCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred EeCCCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCH
Confidence 34678999999999998889887665 4799999999999875
No 43
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=88.00 E-value=0.22 Score=38.32 Aligned_cols=42 Identities=26% Similarity=0.214 Sum_probs=35.3
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.-.+.-.+.+|-+|+|+|-||
T Consensus 70 l~~~~~~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~ 111 (116)
T 3fkc_A 70 LSFIRAEIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVK 111 (116)
T ss_dssp ECSSCHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCH
T ss_pred eCCCCHHHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCcc
Confidence 468999999999999889988334556789999999999876
No 44
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=87.84 E-value=0.33 Score=36.93 Aligned_cols=41 Identities=17% Similarity=0.293 Sum_probs=34.4
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|++.|+
T Consensus 69 l~~~~~~~f~~ll~~~Yt~~~~~~~-~~~~~ll~~A~~~~i~ 109 (120)
T 2if5_A 69 IDFVSAEALTALMDFAYTATLTVST-ANVGDILSAARLLEIP 109 (120)
T ss_dssp CCSSCHHHHHHHHHHHHHSCCCCCG-GGHHHHHHHHHHTTCH
T ss_pred eCCCCHHHHHHHHHHHcCCCCccCH-HHHHHHHHHHHHhCCH
Confidence 4589999999999997788877543 4789999999999875
No 45
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=87.58 E-value=0.46 Score=37.98 Aligned_cols=41 Identities=34% Similarity=0.421 Sum_probs=34.9
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.-+ .-.+.+|-+|+|+|.|+
T Consensus 93 l~~v~~~~f~~lL~fiYtg~~~i~-~~~v~~ll~~A~~l~i~ 133 (144)
T 2ppi_A 93 LEGISVMVMREILDYIFSGQIRLN-EDTIQDVVQAADLLLLT 133 (144)
T ss_dssp CCSSCHHHHHHHHHHHTTSCCCCC-TTTHHHHHHHHHHTTCH
T ss_pred eCCCCHHHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHhCcH
Confidence 458999999999999888988644 45799999999999875
No 46
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=87.25 E-value=0.41 Score=39.38 Aligned_cols=93 Identities=18% Similarity=0.314 Sum_probs=62.5
Q ss_pred EEEe-eCCeEEEechHhhhcCCCcchhhcccC-CCcccCCCCCCcEEeccCCCccchHHHHhhHhCCe------------
Q psy968 168 VTLV-VDNTRFVLDPALFTAYPNTMLGRMFSS-GREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQV------------ 233 (272)
Q Consensus 168 V~LN-VGG~rF~t~~sTL~r~PdT~Lg~Mfs~-~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGk------------ 233 (272)
|+|. .+|+.|.+.+.. .+... ++..||.. +... ...+++.- -.+|++.+.+.|++|..+++
T Consensus 3 v~L~ssDg~~f~v~~~v-A~~S~-~i~~m~~~~~~~~--e~~~~~Ip-l~~V~~~iL~kViey~~~h~~~~~~~~~~~~~ 77 (159)
T 2ast_A 3 IKLQSSDGEIFEVDVEI-AKQSV-TIKTMLEDLGMDD--EGDDDPVP-LPNVNAAILKKVIQWCTHHKDDPPPPEDDENK 77 (159)
T ss_dssp EEEECTTSCEEEEEHHH-HHTCH-HHHHHTTSSCSS--------CEE-CTTSCHHHHHHHHHHHHHTTTCCC--------
T ss_pred EEEEcCCCCEEEeCHHH-HHHhH-HHHHHHHhcCCcc--cccCCCcC-CCCccHHHHHHHHHHHHHcCcCCCCccccccc
Confidence 6776 479999999998 55543 78899875 3210 12223333 45799999999999999876
Q ss_pred --------------eecCCCCCHHHHHHHHHhcCCCCCCccccccccc
Q psy968 234 --------------IKCPPSVSVQELREACDYLLVPFDAHTVRCQNLR 267 (272)
Q Consensus 234 --------------Lh~P~~vc~~~f~eE~~Ff~Ip~~~~~~cC~~l~ 267 (272)
+.++. ..+..+..++.|++|. .....||+-+.
T Consensus 78 ~~~~~~i~~wD~~F~~id~-~~l~eLl~AAnyL~I~-~Lld~~c~~va 123 (159)
T 2ast_A 78 EKRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIK-GLLDVTCKTVA 123 (159)
T ss_dssp ---CCCCCHHHHHHTCSCH-HHHHHHHHHHHHHTCH-HHHHHHHHHHH
T ss_pred ccchhhhhHHHHHHHcCCH-HHHHHHHHHHHHHhHH-HHHHHHHHHHH
Confidence 33222 1256789999999984 45677776553
No 47
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=86.83 E-value=0.48 Score=35.21 Aligned_cols=42 Identities=19% Similarity=0.158 Sum_probs=35.3
Q ss_pred cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
...++++.+|+++|+|--+|.+.-++ -.+.+|-.++|++.+|
T Consensus 54 ~l~~~~~~~f~~~l~~iYt~~~~~~~-~~~~~ll~~A~~~~~~ 95 (109)
T 2vkp_A 54 HIPDVEPAAFLILLKYMYSDEIDLEA-DTVLATLYAAKKYIVP 95 (109)
T ss_dssp EETTSCHHHHHHHHHHHHHCCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred EeCCCCHHHHHHHHHHHcCCCccCCH-HHHHHHHHHHHHhCcH
Confidence 44689999999999998899886554 6788999999988775
No 48
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=86.83 E-value=0.45 Score=36.49 Aligned_cols=40 Identities=10% Similarity=0.164 Sum_probs=34.5
Q ss_pred CchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccC
Q psy968 22 CKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPF 62 (272)
Q Consensus 22 ~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f 62 (272)
++++.+|+++|+|--+|.+.-++ -.+.+|-+|+|+|.|+-
T Consensus 77 ~~~~~~f~~~l~~iYtg~~~~~~-~~v~~ll~~A~~l~i~~ 116 (125)
T 3ohu_A 77 EVTARGFGPLLQFAYTAKLLLSR-ENIREVIRCAEFLRMHN 116 (125)
T ss_dssp TCCHHHHHHHHHHHTTSEEEECT-TTHHHHHHHHHHHTBSS
T ss_pred CCCHHHHHHHHHhHcCCceEECH-HHHHHHHHHHHHhCCHH
Confidence 39999999999998889887654 57899999999998873
No 49
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=86.81 E-value=0.49 Score=36.42 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=34.3
Q ss_pred cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
.++++.+|+++|+|--+|.+.-+ .-.+.+|-+|+|+|.|+
T Consensus 74 ~~~~~~~f~~ll~~~Ytg~~~~~-~~~~~~ll~~A~~~~i~ 113 (127)
T 1r29_A 74 PEINPEGFNILLDFMYTSRLNLR-EGNIMAVMATAMYLQME 113 (127)
T ss_dssp TTSCHHHHHHHHHHHHHSCCCCC-TTTHHHHHHHHHHTTCH
T ss_pred CCCCHHHHHHHHHHHcCCCcCcC-HHHHHHHHHHHHHhCCH
Confidence 78999999999999888887654 35789999999999775
No 50
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=86.30 E-value=0.51 Score=37.12 Aligned_cols=41 Identities=20% Similarity=0.237 Sum_probs=34.8
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.-++ -.+.+|.+|+|||.|+
T Consensus 65 l~~~~~~~f~~lL~fiYtg~~~i~~-~~v~~ll~~A~~l~i~ 105 (135)
T 2yy9_A 65 LPAGFAEIFGLLLDFFYTGHLALTS-GNRDQVLLAAKELRVP 105 (135)
T ss_dssp ECGGGHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHTTCH
T ss_pred eCCCCHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhCcH
Confidence 4689999999999998888886544 5699999999999874
No 51
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=84.07 E-value=0.57 Score=36.15 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=35.3
Q ss_pred cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccC
Q psy968 21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPF 62 (272)
Q Consensus 21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f 62 (272)
.+|++.+|+++|+|--+|.+.-++ -.+.+|-+|+|++.||-
T Consensus 73 ~~v~~~~f~~lL~~iYtg~~~i~~-~~v~~ll~~A~~~~~~~ 113 (124)
T 2ihc_A 73 EEVTVKGFEPLIQFAYTAKLILSK-ENVDEVCKCVEFLSVHN 113 (124)
T ss_dssp TTSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHHTBSS
T ss_pred CCcCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHHCCHH
Confidence 589999999999998888886554 46999999999998874
No 52
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=82.98 E-value=0.7 Score=35.75 Aligned_cols=41 Identities=12% Similarity=0.076 Sum_probs=33.4
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.- +.-.+.+|-+++|++.+|
T Consensus 69 l~~~~~~~~~~~l~~~Y~~~~~~-~~~~~~~ll~~A~~~~~~ 109 (145)
T 4eoz_A 69 INDVEPEVFKEMMCFIYTGKAPN-LDKMADDLLAAADKYALE 109 (145)
T ss_dssp ECSSCHHHHHHHHHHHHHSCCTT-GGGTHHHHHHHHHHTTCH
T ss_pred ecCCCHHHHHHHHHhhccCccCC-cHHHHHHHHHHHHHhCHH
Confidence 35799999999999988888763 345678899999998774
No 53
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=82.73 E-value=1.5 Score=33.11 Aligned_cols=77 Identities=21% Similarity=0.310 Sum_probs=51.0
Q ss_pred eCCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHh-----C---Ceee---cCCCC
Q psy968 172 VDNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYK-----G---QVIK---CPPSV 240 (272)
Q Consensus 172 VGG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYR-----T---GkLh---~P~~v 240 (272)
.+|+.|.+.+.. .+... .+..||..... .....+++.-+ .+|++.+.+.|++|.. + +.+. +++ .
T Consensus 9 sDg~~F~v~r~v-A~~S~-~ik~m~~~~~~-~~E~~~~~I~l-~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~-~ 83 (97)
T 4ajy_C 9 SDGHEFIVKREH-ALTSG-TIKAMLSGPGQ-FAENETNEVNF-REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-E 83 (97)
T ss_dssp TTCCEEEEEHHH-HTTSH-HHHHHHCCC---------CEEEC-TTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG-G
T ss_pred cCCcEEEecHHH-HHHhH-HHHHHHHhCCC-ccccCCCceEC-CCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH-H
Confidence 479999999998 55544 77888875211 11122333333 5799999999999987 4 5554 444 2
Q ss_pred CHHHHHHHHHhcC
Q psy968 241 SVQELREACDYLL 253 (272)
Q Consensus 241 c~~~f~eE~~Ff~ 253 (272)
.+.++..++.|++
T Consensus 84 ~l~eLl~AAnyL~ 96 (97)
T 4ajy_C 84 IALELLMAANFLD 96 (97)
T ss_dssp GHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhC
Confidence 3678899999876
No 54
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=82.63 E-value=0.79 Score=39.34 Aligned_cols=42 Identities=33% Similarity=0.419 Sum_probs=35.7
Q ss_pred cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
...|+++.+|+++|+|--+|.+..++ -.+.+|-+|+|+|.||
T Consensus 76 ~l~~v~~~~f~~ll~~~Yt~~~~i~~-~~v~~ll~~A~~l~i~ 117 (256)
T 3hve_A 76 ELEGISVMVMREILDYIFSGQIRLNE-DTIQDVVQAADLLLLT 117 (256)
T ss_dssp ECSSCCHHHHHHHHHHHHHSCCCCC--CCHHHHHHHHHHHTCH
T ss_pred EeCCCCHHHHHHHHhhccCCCCcccH-hHHHHHHHHHHHHChH
Confidence 34689999999999999999998765 5799999999998876
No 55
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=81.07 E-value=0.88 Score=36.19 Aligned_cols=41 Identities=12% Similarity=0.076 Sum_probs=33.8
Q ss_pred ccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
..++++.+|+++|+|--+|.+.- +.-.+.+|-+++|++.+|
T Consensus 78 l~~~~~~~f~~~l~~~Yt~~~~~-~~~~~~~ll~~A~~~~~~ 118 (172)
T 3htm_A 78 INDVEPEVFKEMMCFIYTGKAPN-LDKMADDLLAAADKYALE 118 (172)
T ss_dssp ECSSCHHHHHHHHHHHHHSCCTT-GGGTHHHHHHHHHHTTCH
T ss_pred ecCCCHHHHHHHHHHHhCCCCCC-cHHHHHHHHHHHHHhCcH
Confidence 35899999999999988888763 345688899999998775
No 56
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=80.57 E-value=1.3 Score=34.73 Aligned_cols=40 Identities=15% Similarity=0.188 Sum_probs=33.9
Q ss_pred cCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 21 FCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 21 ~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
.+|++.+|+++|+|--+|.+.=++ -.|.+|-+|+|+|.|+
T Consensus 80 ~~v~~~~~~~lL~~~Ytg~~~i~~-~~v~~ll~~A~~~~i~ 119 (138)
T 2z8h_A 80 EEVTVKGFEPLIQFAYTAKLILSK-DNVDEVCRCVEFLSVH 119 (138)
T ss_dssp TTSCHHHHHHHHHHHHHSCCCCCT-TTHHHHHHHHHHHTCG
T ss_pred CCCCHHHHHHHHHHhcCCCcccCH-HHHHHHHHHHHHhCCH
Confidence 589999999999998888876443 4689999999999876
No 57
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=78.24 E-value=1 Score=39.24 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=34.6
Q ss_pred CchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 22 CKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 22 ~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
|+++.+|+++|+|--+|.+.-++ -.+.+|-+|+|+|.|+
T Consensus 87 ~v~~~~f~~ll~~~Ytg~~~i~~-~~v~~ll~~A~~l~i~ 125 (279)
T 3i3n_A 87 GPEPDTVEAVIEYMYTGRIRVST-GSVHEVLELADRFLLI 125 (279)
T ss_dssp CSCHHHHHHHHHHHHHSEEEEET-TTHHHHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHhhCcCCcccCH-HHHHHHHHHHHHHCcH
Confidence 89999999999999999998765 4689999999998875
No 58
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=64.38 E-value=2.6 Score=34.53 Aligned_cols=69 Identities=17% Similarity=0.250 Sum_probs=43.3
Q ss_pred cccCchHHHHHHHHHHhhcCcccCC-------------------------CCCchHHHHHhhccccccCCCCcccccchH
Q psy968 19 QLFCKSFKVFRAILDYYKGQVIKCP-------------------------PSVSVQELREACDYLLVPFDAHTVRCQNLR 73 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~~g~~~cp-------------------------~~~sv~elreacdy~~i~f~~~tv~c~~l~ 73 (272)
...||++.+.+.|++|-.++.-.=| +.-.+.||-.|++||-|+= --.+-|+-|.
T Consensus 45 pl~~V~~~iL~kViey~~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~-Lld~~c~~va 123 (159)
T 2ast_A 45 PLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG-LLDVTCKTVA 123 (159)
T ss_dssp ECTTSCHHHHHHHHHHHHHTTTCCC-----------CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHH-HHHHHHHHHH
T ss_pred CCCCccHHHHHHHHHHHHHcCcCCCCcccccccccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHH-HHHHHHHHHH
Confidence 3568999999999999888873321 2224678888999987641 1112255555
Q ss_pred HHHHHhhchhhHHHH
Q psy968 74 GLLHELSNEGARCQF 88 (272)
Q Consensus 74 ~llhelsn~ga~~~f 88 (272)
..|+.-|-+.-|+.|
T Consensus 124 ~~i~gkt~eeir~~f 138 (159)
T 2ast_A 124 NMIKGKTPEEIRKTF 138 (159)
T ss_dssp HHHSSCCHHHHHHHT
T ss_pred HHHcCCCHHHHHHHc
Confidence 555555544444443
No 59
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=58.82 E-value=3.5 Score=33.93 Aligned_cols=91 Identities=18% Similarity=0.305 Sum_probs=38.7
Q ss_pred CcEEEee-CCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCee----------
Q psy968 166 ERVTLVV-DNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQVI---------- 234 (272)
Q Consensus 166 ~rV~LNV-GG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGkL---------- 234 (272)
..|+|.. +|+.|.+.+.. .+... ++..|+.... ..++. =-.+|++.+.+.|+.|..+.+-
T Consensus 4 ~~v~L~SsDg~~f~v~~~v-A~~S~-~ik~ml~~~~------~~~~I-pl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~ 74 (160)
T 2p1m_A 4 KKIVLKSSDGESFEVEEAV-ALESQ-TIAHMVEDDC------VDNGV-PLPNVTSKILAKVIEYCKRHVEAAASKAEAVE 74 (160)
T ss_dssp ----CCC---------CHH-HHTCT-TTC-------------------CCTTSCHHHHHHHHHC----------------
T ss_pred CEEEEEcCCCCEEEECHHH-HHHhH-HHHHHHHccC------CCCce-eCCcCcHHHHHHHHHHHHHcccCCCccccccc
Confidence 4577775 79999999998 45554 5788876431 11121 2347999999999999987652
Q ss_pred -----------------ecCCCCCHHHHHHHHHhcCCCCCCccccccccc
Q psy968 235 -----------------KCPPSVSVQELREACDYLLVPFDAHTVRCQNLR 267 (272)
Q Consensus 235 -----------------h~P~~vc~~~f~eE~~Ff~Ip~~~~~~cC~~l~ 267 (272)
.++. ..+.++..++.|++|.. ...+||+-+.
T Consensus 75 ~~~~~~~~i~~wD~~Fl~vd~-~~l~eLi~AAnyL~I~~-Lldl~c~~vA 122 (160)
T 2p1m_A 75 GAATSDDDLKAWDADFMKIDQ-ATLFELILAANYLNIKN-LLDLTCQTVA 122 (160)
T ss_dssp ---------------------------CHHHHHHTTCHH-HHHHHHHHHH
T ss_pred ccccccchhhHHHHHHHcCCH-HHHHHHHHHHHHHhHHH-HHHHHHHHHH
Confidence 2222 22456778899998854 4567776554
No 60
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=57.37 E-value=5 Score=32.30 Aligned_cols=88 Identities=17% Similarity=0.275 Sum_probs=58.1
Q ss_pred EEEee-CCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCe-------------
Q psy968 168 VTLVV-DNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQV------------- 233 (272)
Q Consensus 168 V~LNV-GG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGk------------- 233 (272)
|+|.- +|+.|++.+.. .+... .+..|+.... .++.- -.+|++.+.+.|+.|..+.+
T Consensus 4 v~L~SsDg~~f~v~~~v-A~~S~-~ik~ml~~~~-------~~~Ip-l~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~ 73 (141)
T 1fs1_B 4 IKLQSSDGEIFEVDVEI-AKQSV-TIKTMLEDLG-------MDPVP-LPNVNAAILKKVIQWCTHHKDDPPPPEDDENKE 73 (141)
T ss_dssp EEEECTTSCEEEEEGGG-GGTCH-HHHHHHHHTC-------CSSEE-CTTCCHHHHHHHHHHHHHHTTCC----------
T ss_pred EEEEeCCCCEEEecHHH-HHHhH-HHHHHHHhcC-------CCcee-cCCcCHHHHHHHHHHHHHhccCCCccccccccc
Confidence 56655 89999999998 45544 6788876421 22333 34799999999999998644
Q ss_pred -------------eecCCCCCHHHHHHHHHhcCCCCCCccccccccc
Q psy968 234 -------------IKCPPSVSVQELREACDYLLVPFDAHTVRCQNLR 267 (272)
Q Consensus 234 -------------Lh~P~~vc~~~f~eE~~Ff~Ip~~~~~~cC~~l~ 267 (272)
+.++. ....++..++.|++|. ....+||+-+.
T Consensus 74 ~~~~~i~~wD~~F~~vd~-~~l~eLi~AAnyL~I~-~Lldl~c~~vA 118 (141)
T 1fs1_B 74 KRTDDIPVWDQEFLKVDQ-GTLFELILAANYLDIK-GLLDVTCKTVA 118 (141)
T ss_dssp -------HHHHHHTCSCH-HHHHHHHHHHHHHTCH-HHHHHHHHHHH
T ss_pred cchhhhhHHHHHHHhCCH-HHHHHHHHHHHHHhhh-HHHHHHHHHHH
Confidence 21111 1245678889999884 34566666543
No 61
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=57.17 E-value=6 Score=31.56 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=38.6
Q ss_pred HHHHHHHhhcCcccCCCCCch--HHHHHhhccccccCCCCcccccchHHHHHHhh
Q psy968 28 FRAILDYYKGQVIKCPPSVSV--QELREACDYLLVPFDAHTVRCQNLRGLLHELS 80 (272)
Q Consensus 28 f~~ildyy~~g~~~cp~~~sv--~elreacdy~~i~f~~~tv~c~~l~~llhels 80 (272)
+..+-+.|..=+|-|||+.+. ..+-.++|+++||...+... ..+..++..|.
T Consensus 69 l~~l~~~yD~viiD~~~~~~~~~~~~l~~ad~viiv~~~~~~~-~~~~~~~~~l~ 122 (206)
T 4dzz_A 69 IRKDLADYDFAIVDGAGSLSVITSAAVMVSDLVIIPVTPSPLD-FSAAGSVVTVL 122 (206)
T ss_dssp HHHHTTTSSEEEEECCSSSSHHHHHHHHHCSEEEEEECSCTTT-HHHHHHHHHHH
T ss_pred HHHhcCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEecCCHHH-HHHHHHHHHHH
Confidence 334445577789999999864 35667899999999998877 77776665543
No 62
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=57.16 E-value=10 Score=34.36 Aligned_cols=65 Identities=14% Similarity=0.170 Sum_probs=49.4
Q ss_pred HHHHHH------HhhcCcccCCCCCchHH--HHHhhccccccCCCCcccccchHHHHHHhhchhhHHHHHHHHHH
Q psy968 28 FRAILD------YYKGQVIKCPPSVSVQE--LREACDYLLVPFDAHTVRCQNLRGLLHELSNEGARCQFEVFLED 94 (272)
Q Consensus 28 f~~ild------yy~~g~~~cp~~~sv~e--lreacdy~~i~f~~~tv~c~~l~~llhelsn~ga~~~f~~fl~~ 94 (272)
++.+|+ .|..=+|-|||+.+..- .-.+||+++||...+...-+.+..++..|..- +.+++.+++.
T Consensus 141 l~~ll~~l~~~~~yD~VIID~pP~l~~~~~~aL~~aD~viip~~~~~~s~~~~~~l~~~l~~~--~~~~~~~~~~ 213 (361)
T 3pg5_A 141 AGQLAHAMERDDRYDVIFFDVGPSLGPFNRTVLLGCDAFVTPTATDLFSFHAFGNLARWFDAW--VTQYAEIHEG 213 (361)
T ss_dssp HHHHHHHHHHTTCCSEEEEECCSCCSHHHHHHHTTCSEEEEEECCSHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHhhccCCCEEEEECCCCcCHHHHHHHHHCCEEEEEecCChHHHHHHHHHHHHHHHH--HHHHHHHHHh
Confidence 555555 45567899999987543 34789999999999999999999998888764 4556666664
No 63
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=56.56 E-value=3.4 Score=36.31 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=33.3
Q ss_pred cccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhcccccc
Q psy968 19 QLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVP 61 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~ 61 (272)
...++++.+|+++|+|--+|.+.-++ ..+.+|-+|+|++.++
T Consensus 217 ~l~~~~~~~f~~~L~~iYt~~~~~~~-~~~~~ll~~A~~~~~~ 258 (312)
T 3hqi_A 217 EINDVEPEVFKEMMCFIYTGKAPNLD-KMADDLLAAADKYALE 258 (312)
T ss_dssp EECSSCHHHHHHHHHHHHHSCCTTHH-HHHHHHHHHHHHTTCH
T ss_pred EecCCCHHHHHHHHHhhcCCCCCChH-HHHHHHHHHHHHhCHH
Confidence 34689999999999998888664333 5678888899888765
No 64
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=50.05 E-value=5.3 Score=34.38 Aligned_cols=55 Identities=24% Similarity=0.417 Sum_probs=40.8
Q ss_pred HHHHHHHH----HhhcCcccCCCCCchH--HHHHhhccccccCCCCcccccchHHHHHHhh
Q psy968 26 KVFRAILD----YYKGQVIKCPPSVSVQ--ELREACDYLLVPFDAHTVRCQNLRGLLHELS 80 (272)
Q Consensus 26 ~~f~~ild----yy~~g~~~cp~~~sv~--elreacdy~~i~f~~~tv~c~~l~~llhels 80 (272)
..++.+|+ .|..=+|-|||+.+.. ..-.++|+++||...+......+..++..|.
T Consensus 142 ~~l~~~l~~l~~~yD~IiiD~pp~~~~~~~~~l~~aD~viiv~~~~~~s~~~~~~~~~~l~ 202 (298)
T 2oze_A 142 RLLATLLAPLKSDYDLIIIDTVPTPSVYTNNAIVASDYVMIPLQAEEESTNNIQNYISYLI 202 (298)
T ss_dssp THHHHHHGGGGGGCSEEEEEECSSCSHHHHHHHHHCSEEEEEECGGGCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCccHHHHHHHHHCCeEEEEecCcHHHHHHHHHHHHHHH
Confidence 34666664 5667789999998863 2335899999999998887777777666554
No 65
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=49.18 E-value=6.7 Score=32.24 Aligned_cols=58 Identities=12% Similarity=0.074 Sum_probs=41.2
Q ss_pred chHHHHHHHH----HHhhcCcccCCCCCch--HHHHHhhccccccCCCCcccccchHHHHHHhh
Q psy968 23 KSFKVFRAIL----DYYKGQVIKCPPSVSV--QELREACDYLLVPFDAHTVRCQNLRGLLHELS 80 (272)
Q Consensus 23 ~s~~~f~~il----dyy~~g~~~cp~~~sv--~elreacdy~~i~f~~~tv~c~~l~~llhels 80 (272)
+++..++.+| +.|..=+|-|||+.+. ..+-.+||+++||...+...-..+..++..|.
T Consensus 103 ~~~~~l~~~l~~l~~~yD~viiD~p~~~~~~~~~~l~~ad~viiv~~~~~~~~~~~~~~~~~l~ 166 (245)
T 3ea0_A 103 IEPERVSDLIHIAASFYDYIIVDFGASIDHVGVWVLEHLDELCIVTTPSLQSLRRAGQLLKLCK 166 (245)
T ss_dssp CCHHHHHHHHHHHHHHCSEEEEEEESSCCTTHHHHGGGCSEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCEEEEeCCCCCchHHHHHHHHCCEEEEEecCcHHHHHHHHHHHHHHH
Confidence 3455556555 4577789999998764 34567899999999998766666666655543
No 66
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=47.97 E-value=13 Score=30.74 Aligned_cols=61 Identities=10% Similarity=0.091 Sum_probs=44.5
Q ss_pred chHHHHHHHH----H-HhhcCcccCCCCCch--HHHHHhhccccccCCCCcccccchHHHHHHhhchh
Q psy968 23 KSFKVFRAIL----D-YYKGQVIKCPPSVSV--QELREACDYLLVPFDAHTVRCQNLRGLLHELSNEG 83 (272)
Q Consensus 23 ~s~~~f~~il----d-yy~~g~~~cp~~~sv--~elreacdy~~i~f~~~tv~c~~l~~llhelsn~g 83 (272)
++...++.+| + .|..=+|-|||+.+. ..+-.+||+++||.+.+...-.++..++..|.+.+
T Consensus 97 ~~~~~~~~~l~~l~~~~yD~viiD~p~~~~~~~~~~l~~ad~vi~v~~~~~~s~~~~~~~~~~l~~~~ 164 (260)
T 3q9l_A 97 LTREGVAKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGILASKS 164 (260)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCSSSSHHHHHHHHTCSEEEEEECSSHHHHHHHHHHHHHHTTSS
T ss_pred CCHHHHHHHHHHHhccCCCEEEEcCCCCCCHHHHHHHHhCCEEEEEecCChhHHHHHHHHHHHHHHhc
Confidence 3444455554 4 577778999999864 44557899999999998877777777777666555
No 67
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=47.81 E-value=10 Score=32.22 Aligned_cols=52 Identities=13% Similarity=0.102 Sum_probs=35.3
Q ss_pred hHHHHHHHHH-----HhhcCcccCCCCCchHHH--H--HhhccccccCCCCcccccchHHH
Q psy968 24 SFKVFRAILD-----YYKGQVIKCPPSVSVQEL--R--EACDYLLVPFDAHTVRCQNLRGL 75 (272)
Q Consensus 24 s~~~f~~ild-----yy~~g~~~cp~~~sv~el--r--eacdy~~i~f~~~tv~c~~l~~l 75 (272)
....++.+|+ .|..=+|-|||+.+..-+ - .++|+++||...+...-.++..+
T Consensus 113 ~~~~l~~~l~~l~~~~yD~ViID~pp~~~~~~~~~~~~~~aD~viiv~~~~~~s~~~~~~~ 173 (262)
T 2ph1_A 113 IAGMIREFLGRVAWGELDHLLIDLPPGTGDAPLTVMQDAKPTGVVVVSTPQELTAVIVEKA 173 (262)
T ss_dssp HHHHHHHHHHSBCCCSCSEEEEECCSSSSSHHHHHHHHHCCSEEEEEECSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCEEEEECcCCCchHHHHHHhhccCCeEEEEecCccchHHHHHHH
Confidence 4566777773 566679999999985322 1 27999999988775544444433
No 68
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=45.55 E-value=14 Score=27.61 Aligned_cols=39 Identities=21% Similarity=0.246 Sum_probs=27.8
Q ss_pred cccCchHHHHHHHHHHhh-----c---Cccc---CCCCCchHHHHHhhccc
Q psy968 19 QLFCKSFKVFRAILDYYK-----G---QVIK---CPPSVSVQELREACDYL 58 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~-----~---g~~~---cp~~~sv~elreacdy~ 58 (272)
...||++.+.+.|++|-. + |-|. =++ -.+.||-.|+|||
T Consensus 46 ~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~~i~~-~~l~eLl~AAnyL 95 (97)
T 4ajy_C 46 NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAP-EIALELLMAANFL 95 (97)
T ss_dssp ECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCCCCCG-GGHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcCcCCH-HHHHHHHHHHhhh
Confidence 356899999999999965 3 3332 222 3478888888887
No 69
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=44.30 E-value=7.4 Score=31.31 Aligned_cols=68 Identities=18% Similarity=0.255 Sum_probs=40.1
Q ss_pred ccCchHHHHHHHHHHhhcCcccCC-------------------------CCCchHHHHHhhccccccCCCCcccccchHH
Q psy968 20 LFCKSFKVFRAILDYYKGQVIKCP-------------------------PSVSVQELREACDYLLVPFDAHTVRCQNLRG 74 (272)
Q Consensus 20 ~~~~s~~~f~~ildyy~~g~~~cp-------------------------~~~sv~elreacdy~~i~f~~~tv~c~~l~~ 74 (272)
..+|++.+.+.|++|-.+..-.=| +.-.+-||-.|++||-|.- --.+-|+-+..
T Consensus 41 l~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~-Lldl~c~~vA~ 119 (141)
T 1fs1_B 41 LPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKG-LLDVTCKTVAN 119 (141)
T ss_dssp CTTCCHHHHHHHHHHHHHHTTCC-----------------HHHHHHTCSCHHHHHHHHHHHHHHTCHH-HHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHHHHHhccCCCccccccccccchhhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhH-HHHHHHHHHHH
Confidence 458999999999999887763211 2224557778888886631 01122555555
Q ss_pred HHHHhhchhhHHHH
Q psy968 75 LLHELSNEGARCQF 88 (272)
Q Consensus 75 llhelsn~ga~~~f 88 (272)
++..-|-+.-|+.|
T Consensus 120 ~ikgkt~eeiR~~f 133 (141)
T 1fs1_B 120 MIKGKTPEEIRKTF 133 (141)
T ss_dssp HHTTCCHHHHHHHT
T ss_pred HHcCCCHHHHHHHc
Confidence 55444444444433
No 70
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=41.10 E-value=12 Score=30.43 Aligned_cols=47 Identities=6% Similarity=0.133 Sum_probs=33.0
Q ss_pred HHHHHHHH-----HhhcCcccCCCCCch--HHHHHhhccccccCCCCcccccch
Q psy968 26 KVFRAILD-----YYKGQVIKCPPSVSV--QELREACDYLLVPFDAHTVRCQNL 72 (272)
Q Consensus 26 ~~f~~ild-----yy~~g~~~cp~~~sv--~elreacdy~~i~f~~~tv~c~~l 72 (272)
..++.+|+ .|..=+|-|||+.+. ...-.+||+.+||.+.+...-+.+
T Consensus 118 ~~l~~~l~~l~~~~yD~viiD~pp~~~~~~~~~l~~aD~viiv~~~~~~s~~~~ 171 (254)
T 3kjh_A 118 SFLGSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAVDMMIAVIEPNLNSIKTG 171 (254)
T ss_dssp HHHHHHHHHHHHTCCSEEEEEECTTCTTCCHHHHTTCSEEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCcccHHHHHHHHHCCEEEEecCCCHHHHHHH
Confidence 34555554 456678999998765 344488999999999876554433
No 71
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=40.40 E-value=7.5 Score=32.85 Aligned_cols=56 Identities=21% Similarity=0.283 Sum_probs=38.8
Q ss_pred hHHHHHHHHHH----hhcCcccCCCCCchH--HHHHhhccccccCCCCcccccchHHHHHHh
Q psy968 24 SFKVFRAILDY----YKGQVIKCPPSVSVQ--ELREACDYLLVPFDAHTVRCQNLRGLLHEL 79 (272)
Q Consensus 24 s~~~f~~ildy----y~~g~~~cp~~~sv~--elreacdy~~i~f~~~tv~c~~l~~llhel 79 (272)
+...++.+|+. |..=+|-|||+.+.. ..-.+||+++||...+...-+.+..++..|
T Consensus 130 ~~~~l~~~l~~l~~~yD~viiD~pp~~~~~~~~~l~~aD~vivv~~~~~~s~~~~~~~~~~l 191 (267)
T 3k9g_A 130 KDFLLKTSLGTLYYKYDYIVIDTNPSLDVTLKNALLCSDYVIIPMTAEKWAVESLDLFNFFV 191 (267)
T ss_dssp GGGHHHHHHHTTCTTCSEEEEEECSSCSHHHHHHHTTCSEEEEEEESCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEEECcCCccHHHHHHHHHCCeEEEEeCCChHHHHHHHHHHHHH
Confidence 35566666654 666689999998753 444679999999998766555555554443
No 72
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=38.03 E-value=12 Score=30.59 Aligned_cols=52 Identities=8% Similarity=0.114 Sum_probs=35.2
Q ss_pred HHHHHHHHHH----hhcCcccCCCCCch--HHHHHhhccccccCCCCcccccchHHHH
Q psy968 25 FKVFRAILDY----YKGQVIKCPPSVSV--QELREACDYLLVPFDAHTVRCQNLRGLL 76 (272)
Q Consensus 25 ~~~f~~ildy----y~~g~~~cp~~~sv--~elreacdy~~i~f~~~tv~c~~l~~ll 76 (272)
...++.+|+. |..=+|-|||+.+. ..+-.++|+++||...+...-..+..++
T Consensus 98 ~~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~~~~ad~vi~v~~~~~~~~~~~~~~~ 155 (237)
T 1g3q_A 98 PRKLPEVIKSLKDKFDFILIDCPAGLQLDAMSAMLSGEEALLVTNPEISCLTDTMKVG 155 (237)
T ss_dssp GGGHHHHHHTTGGGCSEEEEECCSSSSHHHHHHHTTCSEEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCEEEEECCCCcCHHHHHHHHHCCeEEEEecCCcccHHHHHHHH
Confidence 3445566654 55568999999873 4456789999999988765444444433
No 73
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=37.42 E-value=11 Score=30.94 Aligned_cols=22 Identities=23% Similarity=0.342 Sum_probs=14.2
Q ss_pred cccCchHHHHHHHHHHhhcCcc
Q psy968 19 QLFCKSFKVFRAILDYYKGQVI 40 (272)
Q Consensus 19 ~~~~~s~~~f~~ildyy~~g~~ 40 (272)
...+|++.+.+.|++|-.+..-
T Consensus 43 pl~~V~~~iL~kVieyc~~h~~ 64 (160)
T 2p1m_A 43 PLPNVTSKILAKVIEYCKRHVE 64 (160)
T ss_dssp CCTTSCHHHHHHHHHC------
T ss_pred eCCcCcHHHHHHHHHHHHHccc
Confidence 3458999999999999888764
No 74
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=37.27 E-value=23 Score=29.58 Aligned_cols=52 Identities=10% Similarity=0.015 Sum_probs=34.6
Q ss_pred HHHHHHHHH----HhhcCcccCCCCCch--HHHHHhhccccccCCCCcccccchHHHH
Q psy968 25 FKVFRAILD----YYKGQVIKCPPSVSV--QELREACDYLLVPFDAHTVRCQNLRGLL 76 (272)
Q Consensus 25 ~~~f~~ild----yy~~g~~~cp~~~sv--~elreacdy~~i~f~~~tv~c~~l~~ll 76 (272)
...++.+|+ .|..=+|-|||+.+. ..+-.+||+.+||...+...-.++..++
T Consensus 97 ~~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~~~~ad~vi~v~~~~~~~~~~~~~~~ 154 (263)
T 1hyq_A 97 PEKLEDVLTQIMESTDILLLDAPAGLERSAVIAIAAAQELLLVVNPEISSITDGLKTK 154 (263)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHSSEEEEEECSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhCCEEEEeCCCCCChHHHHHHHHCCEEEEEeCCChhHHHHHHHHH
Confidence 444555554 456668999999883 3455789999999887755444444433
No 75
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=34.39 E-value=20 Score=31.30 Aligned_cols=55 Identities=13% Similarity=0.257 Sum_probs=39.0
Q ss_pred HHHHHHHH----HhhcCcccCCCCCchHH---HHHhhccccccCCCCcccccchHHHHHHhh
Q psy968 26 KVFRAILD----YYKGQVIKCPPSVSVQE---LREACDYLLVPFDAHTVRCQNLRGLLHELS 80 (272)
Q Consensus 26 ~~f~~ild----yy~~g~~~cp~~~sv~e---lreacdy~~i~f~~~tv~c~~l~~llhels 80 (272)
..|+.+|+ -|..=+|-|||..++.+ +-..||..+++.......-..+...+..|.
T Consensus 179 ~~l~~ll~~l~~~yD~VIIDtpp~~~~~d~~~l~~~aD~vilVv~~~~~~~~~~~~~~~~l~ 240 (271)
T 3bfv_A 179 RAFANLYDTLLMNYNFVIIDTPPVNTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIE 240 (271)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCCTTTCSHHHHHHHHHCEEEEEEETTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCchHHHHHHHHHHCCEEEEEEeCCCCcHHHHHHHHHHHH
Confidence 44555554 56777899999887665 446799999999888776666665554443
No 76
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=33.34 E-value=14 Score=26.39 Aligned_cols=33 Identities=18% Similarity=0.008 Sum_probs=19.3
Q ss_pred eecccccCchHHHHHHHHHHhhcCcccCCCCCc
Q psy968 15 FKTGQLFCKSFKVFRAILDYYKGQVIKCPPSVS 47 (272)
Q Consensus 15 ~~~~~~~~~s~~~f~~ildyy~~g~~~cp~~~s 47 (272)
.+-||..|+|-.-+|..|..++.|--.||...|
T Consensus 19 I~~Ak~lGlsleEIrefL~l~~~~~~~~~~~rs 51 (57)
T 1b0n_B 19 MVEAKEANISPEEIRKYLLLNKKSAHPGPAARS 51 (57)
T ss_dssp HHHHHHTTCCHHHHHHHHHHC------------
T ss_pred HHHHHHcCCCHHHHHHHHHHhccCCCcchHHHh
Confidence 456899999999999999999999999998654
No 77
>3cwq_A Para family chromosome partitioning protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: ADP; 2.47A {Synechocystis SP}
Probab=32.96 E-value=10 Score=31.36 Aligned_cols=53 Identities=19% Similarity=0.313 Sum_probs=39.2
Q ss_pred HHHHHHHHhhcCcccCCCC-Cc--hHHHHHhhccccccCCCCcccccchHHHHHHh
Q psy968 27 VFRAILDYYKGQVIKCPPS-VS--VQELREACDYLLVPFDAHTVRCQNLRGLLHEL 79 (272)
Q Consensus 27 ~f~~ildyy~~g~~~cp~~-~s--v~elreacdy~~i~f~~~tv~c~~l~~llhel 79 (272)
....+.+.|..=+|-|||+ .+ ...+-.++|+++||...+...-..+..++..|
T Consensus 60 ~l~~l~~~yD~viiD~p~~~~~~~~~~~l~~aD~viiv~~~~~~~~~~~~~~~~~l 115 (209)
T 3cwq_A 60 QAAKYAPKYQNIVIDTQARPEDEDLEALADGCDLLVIPSTPDALALDALMLTIETL 115 (209)
T ss_dssp GHHHHGGGCSEEEEEEECCCSSSHHHHHHHTSSEEEEEECSSHHHHHHHHHHHHHH
T ss_pred HHHHhhhcCCEEEEeCCCCcCcHHHHHHHHHCCEEEEEecCCchhHHHHHHHHHHH
Confidence 4556667888889999999 44 34455789999999999877666666555444
No 78
>1wxm_A A-RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain (RBD), ubiquitin-like fold, A-RAF kinase, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=32.46 E-value=27 Score=27.07 Aligned_cols=29 Identities=34% Similarity=0.568 Sum_probs=23.4
Q ss_pred ceeEEEEecCC--CccccCCCCCCCCccccc
Q psy968 109 RECHVVVLLDD--DTVDWDEAYPPQMGEEYS 137 (272)
Q Consensus 109 rechivvl~~~--d~v~wd~~~pp~mgEe~~ 137 (272)
--|.+-.+.+. ..||||.|--.-.|||.-
T Consensus 46 e~C~Vy~~~~~~~~~IdWdtDi~~L~~eEL~ 76 (86)
T 1wxm_A 46 DCCVVYRLIKGRKTVTAWDTAIAPLDGEELI 76 (86)
T ss_dssp SSEEEEEESSSCEEEECSSSBSTTCSSCEEE
T ss_pred HHeEEEEcCCCCccccchhHhhhhccCcEEE
Confidence 35888888766 889999999888888764
No 79
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=32.44 E-value=16 Score=30.91 Aligned_cols=54 Identities=28% Similarity=0.422 Sum_probs=39.2
Q ss_pred HHHHHHH--HHhhcCcccCCCCCchH--HHHHhhccccccCCCCcccccchHHHHHHh
Q psy968 26 KVFRAIL--DYYKGQVIKCPPSVSVQ--ELREACDYLLVPFDAHTVRCQNLRGLLHEL 79 (272)
Q Consensus 26 ~~f~~il--dyy~~g~~~cp~~~sv~--elreacdy~~i~f~~~tv~c~~l~~llhel 79 (272)
..++.+| +.|..=+|-|||+.+.. ..-.+||+++||...+...-..+..++..|
T Consensus 101 ~~l~~~l~~~~yD~iiiD~pp~~~~~~~~~l~~aD~viiv~~~~~~s~~~~~~~~~~l 158 (257)
T 1wcv_1 101 TALREALRDEGYDLVLLDAPPSLSPLTLNALAAAEGVVVPVQAEYYALEGVAGLLATL 158 (257)
T ss_dssp THHHHHCCCTTCSEEEEECCSSCCHHHHHHHHHCSEEEEEEESSTHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCEEEEeCCCCCCHHHHHHHHHCCeEEEEecCchHHHHHHHHHHHHH
Confidence 4566666 46778899999998754 334689999999998876666665555444
No 80
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=32.30 E-value=74 Score=23.78 Aligned_cols=82 Identities=22% Similarity=0.326 Sum_probs=49.4
Q ss_pred EEEee-CCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhCCe-----------ee
Q psy968 168 VTLVV-DNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKGQV-----------IK 235 (272)
Q Consensus 168 V~LNV-GG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRTGk-----------Lh 235 (272)
|+|.- +|..|++++... +... .+..|++.... .-...+++.=+ .+|++.+.+.|+.|...-+ ..
T Consensus 3 v~L~SsDg~~f~V~~~~A-~~S~-~ik~ml~~~~~-~~e~~~~~Ipl-~~V~~~iL~kVieyc~~h~~~~~~~~~i~~w~ 78 (96)
T 2fnj_C 3 VKLISSDGHEFIVKREHA-LTSG-TIKAMLSGPGQ-FAENETNEVNF-REIPSHVLSKVCMYFTYKVRYTNSSTEIPEFP 78 (96)
T ss_dssp EEEECTTSCEEEEEHHHH-TTSH-HHHHHHHCC---------CEEEC-SSCCHHHHHHHHHHHHHHHHHHSCCSCCCCCC
T ss_pred EEEEecCCCEEEeCHHHH-HHhH-HHHHHHHccCC-cccccCCceeC-CCCCHHHHHHHHHHHHHccccCCCcccCCCcc
Confidence 45544 899999999974 4443 67778764211 01122344333 4799999999999986422 12
Q ss_pred cCCCCCHHHHHHHHHhcCC
Q psy968 236 CPPSVSVQELREACDYLLV 254 (272)
Q Consensus 236 ~P~~vc~~~f~eE~~Ff~I 254 (272)
+++ ....++..++.|+.|
T Consensus 79 vd~-~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 79 IAP-EIALELLMAANFLDC 96 (96)
T ss_dssp CCT-TTHHHHHHHHHHHTC
T ss_pred cCH-HHHHHHHHHHHHhCc
Confidence 222 235677778888765
No 81
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.58 E-value=32 Score=25.41 Aligned_cols=36 Identities=22% Similarity=0.251 Sum_probs=29.3
Q ss_pred ccccCchHHHHHHH------HHHhhcCcccCCCCCchHHHHHhh
Q psy968 18 GQLFCKSFKVFRAI------LDYYKGQVIKCPPSVSVQELREAC 55 (272)
Q Consensus 18 ~~~~~~s~~~f~~i------ldyy~~g~~~cp~~~sv~elreac 55 (272)
++.+|+|..-|.+| -|||+ ++..+++.|..|+|.|-
T Consensus 7 ~~~~~~s~~~~~~~~~~~~~~~~y~--iLgv~~~as~~eIk~aY 48 (90)
T 2ys8_A 7 GSSASFTKEQADAIRRIRNSKDSWD--MLGVKPGASRDEVNKAY 48 (90)
T ss_dssp CCCCCCCHHHHHHHHHHHTCSSHHH--HHTCCTTCCHHHHHHHH
T ss_pred ccccCCCHHHHHHHHHHhcCCCHHH--HcCcCCCCCHHHHHHHH
Confidence 56789999999888 46665 56679999999999885
No 82
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=29.23 E-value=12 Score=32.45 Aligned_cols=47 Identities=9% Similarity=-0.009 Sum_probs=35.3
Q ss_pred HHhhcCcccCCCCCchH---HHHHhhccccccCCCCcccccchHHHHHHh
Q psy968 33 DYYKGQVIKCPPSVSVQ---ELREACDYLLVPFDAHTVRCQNLRGLLHEL 79 (272)
Q Consensus 33 dyy~~g~~~cp~~~sv~---elreacdy~~i~f~~~tv~c~~l~~llhel 79 (272)
+.|..=+|-|||+.+.. .+-.+||+++||...+...-..+..++..|
T Consensus 155 ~~yD~ViiD~p~~~~~~~~~~~l~~aD~viiv~~~~~~s~~~~~~~~~~l 204 (307)
T 3end_A 155 DDTDVVIFDVLGDVVCGGFAAPLQHADQAVVVTANDFDSIYAMNRIIAAV 204 (307)
T ss_dssp SSCSEEEEEECCSSCCGGGGGGGGTCSEEEEEECSSHHHHHHHHHHHHHH
T ss_pred ccCCEEEEeCCCccchHHHHHHHHHCCEEEEEecCcHHHHHHHHHHHHHH
Confidence 34777789999998764 445789999999998877666665555544
No 83
>3ez9_A Para; DNA binding, winged-HTH, partition, biosynthetic protein; 2.80A {Salmonella enterica subsp} PDB: 3ezf_A
Probab=28.95 E-value=17 Score=33.11 Aligned_cols=48 Identities=25% Similarity=0.230 Sum_probs=34.5
Q ss_pred HHhhcCcccCCCCCchH--HHHHhhccccccCCCCcccccchHHHHHHhh
Q psy968 33 DYYKGQVIKCPPSVSVQ--ELREACDYLLVPFDAHTVRCQNLRGLLHELS 80 (272)
Q Consensus 33 dyy~~g~~~cp~~~sv~--elreacdy~~i~f~~~tv~c~~l~~llhels 80 (272)
+.|..=+|-|||+.+.. ..-.++|+++||...+..........|+.|.
T Consensus 246 ~~yD~VIID~pP~~~~~~~~al~~aD~vliv~~p~~~~~~~~~~~l~~l~ 295 (403)
T 3ez9_A 246 DDYDFIFIDTGPHLDPFLLNGLAASDLLLTPTPPAQVDFHSTLKYLTRLP 295 (403)
T ss_dssp GGCSEEEEEECSSCSHHHHHHHHHCSEEEEEECSSHHHHHHHHHHHHTHH
T ss_pred hcCCEEEEECCCCccHHHHHHHHHCCEEEEEecCchhhHHHHHHHHHHHH
Confidence 45677799999999743 2335899999999988776555555555543
No 84
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=28.52 E-value=98 Score=23.29 Aligned_cols=60 Identities=17% Similarity=0.328 Sum_probs=43.1
Q ss_pred CCcEEEee-CCeEEEechHhhhcCCCcchhhcccCCCcccCCCCCCcEEeccCCCccchHHHHhhHhC
Q psy968 165 EERVTLVV-DNTRFVLDPALFTAYPNTMLGRMFSSGREFTHTNDRGEYEVAEGIPAAVFRAILDYYKG 231 (272)
Q Consensus 165 ~~rV~LNV-GG~rF~t~~sTL~r~PdT~Lg~Mfs~~~~~~~dd~~gEYFFDR~idp~vFr~ILnYYRT 231 (272)
...|+|.- +|..|++.+.. .+... .+..|++.+ + .+++++.=+ .+|++.+.+.|+.|...
T Consensus 3 ~~~v~L~SsDg~~f~V~~~v-A~~S~-~ik~ml~~~---~-e~~~~~Ipl-p~V~~~iL~kVieyc~~ 63 (99)
T 1hv2_A 3 QDFVTLVSKDDKEYEISRSA-AMISP-TLKAMIEGP---F-RESKGRIEL-KQFDSHILEKAVEYLNY 63 (99)
T ss_dssp CSEEEEEETTTEEEEEEHHH-HTTCH-HHHHHHHSS---T-TTCTTEEEE-TTSCHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCEEEECHHH-HHHhH-HHHHHHhcc---c-ccCCCceec-CCcCHHHHHHHHHHHHH
Confidence 35677776 99999999997 44443 677888753 1 233345444 47999999999999864
No 85
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=27.90 E-value=14 Score=31.92 Aligned_cols=50 Identities=14% Similarity=0.098 Sum_probs=36.6
Q ss_pred HHHHHhhcCcccCCCCCch--HHHHHhhccccccCCCCcccccchHHHHHHh
Q psy968 30 AILDYYKGQVIKCPPSVSV--QELREACDYLLVPFDAHTVRCQNLRGLLHEL 79 (272)
Q Consensus 30 ~ildyy~~g~~~cp~~~sv--~elreacdy~~i~f~~~tv~c~~l~~llhel 79 (272)
.+-+.|..=+|-|||+.+. ..+-.++|+++||...+...-..+..++..+
T Consensus 99 ~l~~~yD~viiD~p~~~~~~~~~~l~~aD~viiv~~~~~~~~~~~~~~~~~~ 150 (286)
T 2xj4_A 99 RAMAECDFILIDTPGGDSAITRMAHGRADLVVTPMNDSFVDFDMLGTVDPVT 150 (286)
T ss_dssp HHHHHCSEEEEECCSSCCHHHHHHHHTCSEEEEEEESSHHHHTTTEEECTTT
T ss_pred HHHhcCCEEEEcCCCCccHHHHHHHHHCCEEEEEEcCCccHHHHHHHHHHHh
Confidence 3345677889999999864 3455789999999998876666666555543
No 86
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=27.47 E-value=29 Score=30.65 Aligned_cols=57 Identities=14% Similarity=0.236 Sum_probs=40.9
Q ss_pred HHHHHHHH----HhhcCcccCCCCCchHHHH---HhhccccccCCCCcccccchHHHHHHhhch
Q psy968 26 KVFRAILD----YYKGQVIKCPPSVSVQELR---EACDYLLVPFDAHTVRCQNLRGLLHELSNE 82 (272)
Q Consensus 26 ~~f~~ild----yy~~g~~~cp~~~sv~elr---eacdy~~i~f~~~tv~c~~l~~llhelsn~ 82 (272)
..|+.+|+ .|..=+|-|||..++.+.. ..||..+++.......-..+...+..|.+.
T Consensus 189 ~~l~~ll~~l~~~yD~VIIDtpp~~~~~da~~l~~~aD~vllVv~~~~~~~~~~~~~~~~l~~~ 252 (286)
T 3la6_A 189 ERFAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQN 252 (286)
T ss_dssp HHHHHHHHHHHHHCSEEEEECCCTTTCTHHHHHTTTCSEEEEEEETTTSBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCCcchHHHHHHHHHCCeEEEEEeCCCCcHHHHHHHHHHHHhC
Confidence 45555554 5667789999998876544 568999999888877767776666655443
No 87
>3ez2_A Plasmid partition protein A; type IA, DNA binding, winged-HTH, DNA bindin; HET: ADP EPE; 2.05A {Escherichia coli} PDB: 3ez6_A* 3ez7_A
Probab=27.43 E-value=21 Score=32.40 Aligned_cols=50 Identities=14% Similarity=0.222 Sum_probs=34.9
Q ss_pred HHHHhhcCcccCCCCCchH--HHHHhhccccccCCCCcccccchHHHHHHhh
Q psy968 31 ILDYYKGQVIKCPPSVSVQ--ELREACDYLLVPFDAHTVRCQNLRGLLHELS 80 (272)
Q Consensus 31 ildyy~~g~~~cp~~~sv~--elreacdy~~i~f~~~tv~c~~l~~llhels 80 (272)
+-+.|..=+|-|||+.+.. ..-.+||+++||...+...-......|+.|.
T Consensus 241 l~~~yD~ViiD~pp~~~~~~~~~l~~aD~vliv~~p~~~~~~~~~~~l~~l~ 292 (398)
T 3ez2_A 241 LKSDYDFILVDSGPHLDAFLKNALASANILFTPLPPATVDFHSSLKYVARLP 292 (398)
T ss_dssp HTTTCSEEEEEECSCCSHHHHHHHHHCSEEEEEECCSHHHHHHHHHHHHHHH
T ss_pred hhccCCEEEEeCCCCccHHHHHHHHHCCEEEEEecCchhhHHHHHHHHHHHH
Confidence 3345777799999998753 2335899999999998775554444455443
No 88
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=26.88 E-value=11 Score=31.70 Aligned_cols=46 Identities=2% Similarity=-0.062 Sum_probs=33.3
Q ss_pred HhhcCcccCCCCCchHHHH-----HhhccccccCCCCcccccchHHHHHHh
Q psy968 34 YYKGQVIKCPPSVSVQELR-----EACDYLLVPFDAHTVRCQNLRGLLHEL 79 (272)
Q Consensus 34 yy~~g~~~cp~~~sv~elr-----eacdy~~i~f~~~tv~c~~l~~llhel 79 (272)
.|..=+|-|||+.+..-+. +++|+++||...+...-..+..++..|
T Consensus 115 ~yD~iiiD~~~~~~~~~~~~~~~~~~aD~viiv~~~~~~s~~~~~~~~~~l 165 (269)
T 1cp2_A 115 DLDYVFYDVLGDVVCGGFAMPIREGKAQEIYIVASGEMMALYAANNISKGI 165 (269)
T ss_dssp TCSEEEEEEECSSCSTTTTHHHHTTSCCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCchhhhhhhhhhhhHhhCCEEEEeecCchhhHHHHHHHHHHH
Confidence 4777799999987654442 479999999998876666655555443
No 89
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=24.38 E-value=43 Score=29.58 Aligned_cols=56 Identities=14% Similarity=0.255 Sum_probs=39.6
Q ss_pred HHHHHHHHHH----hhcCcccCCCCCchHHH---HHhhccccccCCCCcccccchHHHHHHhh
Q psy968 25 FKVFRAILDY----YKGQVIKCPPSVSVQEL---REACDYLLVPFDAHTVRCQNLRGLLHELS 80 (272)
Q Consensus 25 ~~~f~~ildy----y~~g~~~cp~~~sv~el---reacdy~~i~f~~~tv~c~~l~~llhels 80 (272)
...|+.+|+- |..=+|-|||...+.+. -..||..+++.......-..+...+..|.
T Consensus 200 ~~~l~~ll~~l~~~yD~VIIDtpp~~~~~d~~~l~~~ad~vilV~~~~~~~~~~~~~~~~~l~ 262 (299)
T 3cio_A 200 RDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLE 262 (299)
T ss_dssp SHHHHHHHHHHHHHCSEEEEECCCTTTCTHHHHHGGGCSEEEEEEETTTSCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCchhHHHHHHHHHCCEEEEEEcCCCChHHHHHHHHHHHH
Confidence 4556666654 56669999999887664 35689999988877766666666655554
No 90
>3lfp_A CSP231I C protein; transcriptional regulator, DNA binding protein, helix-turn-H restriction-modification, transcription; 2.00A {Citrobacter SP} PDB: 3lis_A
Probab=24.28 E-value=71 Score=22.95 Aligned_cols=45 Identities=16% Similarity=0.094 Sum_probs=33.2
Q ss_pred ecccccCchHHHHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCC
Q psy968 16 KTGQLFCKSFKVFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDA 64 (272)
Q Consensus 16 ~~~~~~~~s~~~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~ 64 (272)
.+|+..|||.+.+.+-+--|.+|.- ..|+..|...|++|=||.+.
T Consensus 19 ~lA~~~gis~~~~~~~is~~E~g~~----~p~~~~l~~la~~l~v~~~~ 63 (98)
T 3lfp_A 19 KLGVLAGIDEASASARMNQYEKGKH----APDFEMANRLAKVLKIPVSY 63 (98)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHHTSS----CCCHHHHHHHHHHHTSCGGG
T ss_pred HHHHHhCCCcchhhhHHHHHHCCCC----CCCHHHHHHHHHHHCcCHHH
Confidence 5788889998876555666777752 34788888888888887654
No 91
>4fqn_A Malcavernin; helical domain, harmonin-homology domain, protein-protein interaction, HOMO-dimer, protein binding; 1.90A {Homo sapiens}
Probab=22.72 E-value=91 Score=24.67 Aligned_cols=44 Identities=36% Similarity=0.632 Sum_probs=28.7
Q ss_pred HHHHHHHHhhcCcccCCCCCchHHHHHhhccccccCCCCcccccchHHHH------------HHhhchhhHHHHHHHHHH
Q psy968 27 VFRAILDYYKGQVIKCPPSVSVQELREACDYLLVPFDAHTVRCQNLRGLL------------HELSNEGARCQFEVFLED 94 (272)
Q Consensus 27 ~f~~ildyy~~g~~~cp~~~sv~elreacdy~~i~f~~~tv~c~~l~~ll------------helsn~ga~~~f~~fl~~ 94 (272)
-|.++|-=|++| ++|.|. |+.|..|. |=+.++ -..+||.|||.
T Consensus 36 qFA~Llr~YR~G-------~~I~~F-----------------c~kLl~LyG~~Rk~LL~gmRpFIp~~-Di~~FesFle~ 90 (98)
T 4fqn_A 36 QFAALLHEYRNG-------ASIHEF-----------------CINLRQLYGDSRKFLLLGLRPFIPEK-DSQHFENFLET 90 (98)
T ss_dssp HHHHHHHHHHTT-------CCHHHH-----------------HHHHHHHHCGGGGGGGGGGGGGSCHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-------CCHHHH-----------------HHHHHHHhchHHHHHHhhccCCCChh-hHHHHHHHHHH
Confidence 478888888886 356554 55554442 223344 78899999997
Q ss_pred H
Q psy968 95 L 95 (272)
Q Consensus 95 ~ 95 (272)
.
T Consensus 91 i 91 (98)
T 4fqn_A 91 I 91 (98)
T ss_dssp T
T ss_pred c
Confidence 4
No 92
>2efv_A Hypothetical protein MJ0366; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Methanocaldococcus jannaschii DSM2661} SCOP: a.43.1.12
Probab=22.26 E-value=30 Score=27.13 Aligned_cols=20 Identities=35% Similarity=0.486 Sum_probs=17.4
Q ss_pred CcccccchHHHHHHhhchhh
Q psy968 65 HTVRCQNLRGLLHELSNEGA 84 (272)
Q Consensus 65 ~tv~c~~l~~llhelsn~ga 84 (272)
..|.+..||.+||+|-|.+.
T Consensus 19 k~Id~r~lRY~LHKLen~~~ 38 (92)
T 2efv_A 19 KNIDGRKLRYLLHKLENVEN 38 (92)
T ss_dssp SCCCHHHHHHHHHHGGGCCC
T ss_pred ecCcHHHHHHHHHHHccCCC
Confidence 56789999999999999875
No 93
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=21.51 E-value=16 Score=31.40 Aligned_cols=46 Identities=2% Similarity=-0.036 Sum_probs=33.0
Q ss_pred HhhcCcccCCCCCchHHH-----HHhhccccccCCCCcccccchHHHHHHh
Q psy968 34 YYKGQVIKCPPSVSVQEL-----REACDYLLVPFDAHTVRCQNLRGLLHEL 79 (272)
Q Consensus 34 yy~~g~~~cp~~~sv~el-----reacdy~~i~f~~~tv~c~~l~~llhel 79 (272)
.|..=+|-|||+.+..-+ ..++|+++||...+...-..+..++..|
T Consensus 118 ~yD~ViID~~~~~~~~~~~~~~~~~~aD~viiv~~~~~~s~~~~~~~~~~l 168 (289)
T 2afh_E 118 DLDFVFYDVLGDVVCGGFAMPIRENKAQEIYIVCSGEMMAMYAANNISKGI 168 (289)
T ss_dssp TCSEEEEEEECSSCCTTTTHHHHTTCCCEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCccccchhhhhhhhhhCCEEEEEecCCHHHHHHHHHHHHHH
Confidence 577779999997654333 2589999999998877666665555443
No 94
>2i5i_A UPF0249 protein EF_3048; putative cellobiose-phosphate cleavage protein, structural G joint center for structural genomics, JCSG; HET: MSE; 1.70A {Enterococcus faecalis} SCOP: c.6.2.8
Probab=20.57 E-value=49 Score=29.13 Aligned_cols=29 Identities=21% Similarity=0.221 Sum_probs=26.1
Q ss_pred ceeecccccCchHHHHHHHHHHhhcCccc
Q psy968 13 KIFKTGQLFCKSFKVFRAILDYYKGQVIK 41 (272)
Q Consensus 13 ~~~~~~~~~~~s~~~f~~ildyy~~g~~~ 41 (272)
|+.=-|-++|+|..|=++|++=++.|+++
T Consensus 6 ~LIvnADDfGls~~vN~gI~~~~~~G~lt 34 (263)
T 2i5i_A 6 KLIINADDFGYTPAVTQGIIEAHKRGVVT 34 (263)
T ss_dssp EEEEEEEEETSSHHHHHHHHHHHHSSSCC
T ss_pred EEEEEcccCCCChhHHHHHHHHHHCCcce
Confidence 46667999999999999999999999874
Done!