Query psy9685
Match_columns 979
No_of_seqs 600 out of 4621
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 16:59:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qcw_A Neurexin-1-alpha; synap 100.0 4.8E-44 1.7E-48 461.4 46.4 504 77-640 429-1056(1245)
2 3qcw_A Neurexin-1-alpha; synap 100.0 8.9E-46 3E-50 477.6 20.5 476 71-638 3-656 (1245)
3 3asi_A Neurexin-1-alpha; beta- 100.0 4.9E-41 1.7E-45 384.6 33.4 276 68-382 7-327 (410)
4 1dyk_A Laminin alpha 2 chain; 100.0 1.6E-38 5.6E-43 361.7 35.5 278 51-383 20-312 (394)
5 2jd4_A Laminin subunit alpha-1 100.0 2.3E-38 7.9E-43 359.8 36.5 288 52-393 7-332 (383)
6 2wjs_A Laminin subunit alpha-2 100.0 7.4E-36 2.5E-40 359.4 39.5 266 68-382 12-301 (608)
7 1h30_A GAS6, growth-arrest-spe 100.0 8E-33 2.8E-37 317.3 28.7 264 68-382 42-334 (422)
8 2wjs_A Laminin subunit alpha-2 100.0 2.2E-31 7.5E-36 320.4 32.5 256 68-383 205-487 (608)
9 1d2s_A SHBG, sex hormone-bindi 99.8 2.4E-20 8.3E-25 184.6 16.5 126 68-217 7-132 (170)
10 1f5f_A SHBG, sex hormone-bindi 99.8 3.4E-20 1.1E-24 190.0 16.9 137 59-217 8-150 (205)
11 3pve_A Agrin, AGRN protein; mR 99.8 4.9E-20 1.7E-24 186.2 16.8 134 68-217 11-146 (189)
12 3bod_A Neurexin-1-alpha; neure 99.8 5.2E-20 1.8E-24 184.0 16.3 134 67-216 5-141 (178)
13 1dyk_A Laminin alpha 2 chain; 99.8 2.6E-19 8.7E-24 203.4 23.5 122 252-393 17-165 (394)
14 2r16_A Neurexin-1-alpha; beta- 99.8 1E-19 3.5E-24 182.5 17.6 128 68-216 7-135 (182)
15 3v64_A Low-density lipoprotein 99.8 1.2E-19 4.1E-24 183.5 17.8 133 68-217 4-146 (191)
16 3sh4_A LG3 peptide; actin disa 99.8 1.3E-19 4.4E-24 184.0 17.6 136 68-216 7-144 (195)
17 1pz7_A Agrin; structural prote 99.8 2E-19 6.7E-24 184.3 18.4 133 68-217 14-159 (204)
18 2r1d_A Neurexin-1-beta, neurex 99.8 1.8E-19 6E-24 186.2 16.0 133 68-216 40-175 (226)
19 2r1b_A Neurexin-1-beta, neurex 99.8 1.6E-19 5.4E-24 186.3 15.3 111 68-194 12-122 (220)
20 2jd4_A Laminin subunit alpha-1 99.8 1.6E-18 5.5E-23 196.3 22.2 111 264-393 20-152 (383)
21 2h0b_A Neurexin-1-alpha; B-san 99.8 8.8E-19 3E-23 176.5 17.8 129 68-217 7-139 (184)
22 4fbr_A Lectin, myxobacterial h 99.8 1E-23 3.4E-28 216.8 -20.9 243 580-899 8-265 (267)
23 3asi_A Neurexin-1-alpha; beta- 99.8 3.1E-18 1.1E-22 195.6 20.3 74 291-378 25-99 (410)
24 1d2s_A SHBG, sex hormone-bindi 99.7 2.8E-17 9.7E-22 162.5 17.2 88 292-393 26-131 (170)
25 2vj3_A Neurogenic locus notch 99.7 6.7E-18 2.3E-22 160.2 11.1 107 639-752 4-112 (135)
26 1f5f_A SHBG, sex hormone-bindi 99.7 4.8E-17 1.6E-21 166.5 16.9 102 261-382 11-114 (205)
27 1z1y_A Ookinete surface protei 99.7 7.7E-19 2.6E-23 177.0 1.7 145 682-904 8-176 (186)
28 1z1y_A Ookinete surface protei 99.7 2.1E-18 7.3E-23 173.8 4.9 144 605-758 8-174 (186)
29 1pz7_A Agrin; structural prote 99.7 1.1E-16 3.8E-21 163.8 17.4 90 291-393 47-158 (204)
30 2r1d_A Neurexin-1-beta, neurex 99.7 7.6E-17 2.6E-21 166.5 15.8 80 292-383 63-142 (226)
31 2vj3_A Neurogenic locus notch 99.7 2.3E-17 8E-22 156.5 10.6 124 600-730 3-128 (135)
32 2ygq_A WIF-1, WNT inhibitory f 99.7 6.5E-18 2.2E-22 184.0 7.7 158 646-905 153-310 (324)
33 1h30_A GAS6, growth-arrest-spe 99.7 1.5E-16 5E-21 182.2 18.9 78 291-382 60-137 (422)
34 3v64_A Low-density lipoprotein 99.7 1.5E-16 5.1E-21 160.8 16.5 91 290-393 33-145 (191)
35 2r16_A Neurexin-1-alpha; beta- 99.7 2.2E-16 7.7E-21 158.1 17.3 79 291-383 26-104 (182)
36 3pve_A Agrin, AGRN protein; mR 99.7 2.6E-16 9E-21 158.8 17.6 81 291-383 33-113 (189)
37 3sh4_A LG3 peptide; actin disa 99.7 2.5E-16 8.6E-21 159.7 16.9 99 276-383 14-112 (195)
38 2h0b_A Neurexin-1-alpha; B-san 99.7 1.8E-16 6.1E-21 159.6 14.3 78 291-383 27-106 (184)
39 2ygq_A WIF-1, WNT inhibitory f 99.7 2.7E-17 9.1E-22 179.2 8.7 160 603-863 149-308 (324)
40 3fcs_B Integrin beta-3; beta p 99.7 3.3E-17 1.1E-21 193.6 10.2 127 686-904 494-629 (690)
41 3bod_A Neurexin-1-alpha; neure 99.7 3.1E-16 1.1E-20 156.5 14.9 80 292-383 29-108 (178)
42 4fbr_A Lectin, myxobacterial h 99.7 1E-19 3.5E-24 187.1 -13.1 217 615-901 5-237 (267)
43 2r1b_A Neurexin-1-beta, neurex 99.7 1.3E-15 4.4E-20 157.0 17.2 79 293-383 36-114 (220)
44 2vj2_A Jagged-1; signalling, p 99.6 6.5E-17 2.2E-21 159.5 5.3 150 581-757 13-167 (169)
45 3fcs_B Integrin beta-3; beta p 99.6 3.5E-16 1.2E-20 184.9 12.3 134 604-756 436-597 (690)
46 2vj2_A Jagged-1; signalling, p 99.6 8.2E-17 2.8E-21 158.8 5.6 77 661-756 17-95 (169)
47 4d90_A EGF-like repeat and dis 99.6 5.1E-16 1.7E-20 149.3 8.9 79 680-758 53-132 (143)
48 4d90_A EGF-like repeat and dis 99.6 6E-16 2E-20 148.8 8.6 125 724-905 1-135 (143)
49 3k6s_B Integrin beta-2; cell r 99.6 1.1E-15 3.9E-20 179.8 8.8 151 644-879 433-607 (687)
50 2gy5_A Angiopoietin-1 receptor 99.5 5.6E-15 1.9E-19 166.6 7.4 202 583-903 137-350 (423)
51 1yo8_A Thrombospondin-2; EGF, 99.5 1.1E-14 3.7E-19 169.4 9.3 133 681-869 5-155 (634)
52 1yo8_A Thrombospondin-2; EGF, 99.5 4.3E-14 1.5E-18 164.4 12.8 110 639-756 2-141 (634)
53 2bou_A EGF-like module contain 99.5 3.4E-14 1.2E-18 136.3 8.3 114 685-861 7-132 (143)
54 4aqs_A Laminin subunit beta-1; 99.5 3.6E-14 1.2E-18 166.6 9.7 89 811-903 422-525 (525)
55 3k6s_B Integrin beta-2; cell r 99.5 5.7E-14 2E-18 165.4 9.4 127 606-755 433-588 (687)
56 1uzk_A Fibrillin-1; glycoprote 99.4 1.9E-14 6.6E-19 141.1 -0.7 132 601-756 2-156 (162)
57 1uzk_A Fibrillin-1; glycoprote 99.3 4.9E-14 1.7E-18 138.2 -1.7 131 681-860 5-156 (162)
58 2bou_A EGF-like module contain 99.3 4.2E-13 1.4E-17 128.6 4.6 112 729-902 7-133 (143)
59 1dx5_I Thrombomodulin; serine 99.3 2.8E-13 9.5E-18 124.7 3.1 103 721-899 2-111 (118)
60 2gy5_A Angiopoietin-1 receptor 99.3 2E-12 7E-17 145.7 10.8 126 583-758 183-319 (423)
61 2w86_A Fibrillin-1, fibrillin1 99.3 5.8E-14 2E-18 135.3 -1.8 125 721-900 2-141 (147)
62 1dx5_I Thrombomodulin; serine 99.3 1.5E-12 5E-17 119.8 4.6 104 639-756 3-112 (118)
63 2w86_A Fibrillin-1, fibrillin1 99.3 2.9E-13 1E-17 130.3 -0.5 137 638-860 2-141 (147)
64 1tpg_A T-plasminogen activator 99.2 8.5E-12 2.9E-16 108.5 6.5 84 807-903 1-86 (91)
65 1tpg_A T-plasminogen activator 99.2 1.3E-11 4.3E-16 107.4 5.6 83 584-676 1-86 (91)
66 1lmj_A Fibrillin 1; EGF, calci 99.1 7E-11 2.4E-15 101.9 4.4 76 722-859 2-79 (86)
67 1emn_A Fibrillin; extracellula 99.0 1.1E-10 3.7E-15 99.5 4.4 71 824-900 4-77 (82)
68 1x7a_L Coagulation factor IX, 99.0 2.5E-10 8.4E-15 108.9 4.9 82 718-867 44-130 (146)
69 1emn_A Fibrillin; extracellula 99.0 7.9E-10 2.7E-14 94.1 6.4 73 722-860 4-77 (82)
70 1lmj_A Fibrillin 1; EGF, calci 98.9 1.7E-10 5.9E-15 99.4 1.8 71 824-899 2-79 (86)
71 1nfu_B Coagulation factor XA, 98.9 1.5E-10 5.3E-15 114.8 1.4 88 718-875 38-130 (195)
72 1aut_L Activated protein C; se 98.9 6.8E-10 2.3E-14 101.3 5.1 89 722-879 5-107 (114)
73 1z6c_A Vitamin K-dependent pro 98.9 4.1E-10 1.4E-14 97.2 2.8 73 824-903 2-78 (87)
74 1z6c_A Vitamin K-dependent pro 98.9 6.6E-10 2.2E-14 95.9 3.6 74 722-862 2-77 (87)
75 2c4f_L Coagulation factor VII 98.9 9.9E-10 3.4E-14 104.5 5.1 80 721-866 45-132 (142)
76 2c4f_L Coagulation factor VII 98.9 1.8E-09 6.1E-14 102.7 6.6 87 600-686 45-139 (142)
77 2p28_B Integrin beta-2; hybrid 98.9 1.6E-09 5.5E-14 109.6 5.7 103 685-863 96-214 (217)
78 2vh0_B Activated factor XA lig 98.8 5.1E-10 1.8E-14 105.2 1.1 81 718-865 38-123 (134)
79 2w2n_E LDL receptor, low-densi 98.8 9.2E-10 3.1E-14 98.7 2.1 77 814-899 20-100 (107)
80 2w2n_E LDL receptor, low-densi 98.8 1.3E-09 4.4E-14 97.8 2.8 81 710-859 18-100 (107)
81 1klo_A Laminin; glycoprotein; 98.8 2.2E-09 7.6E-14 104.2 4.6 29 647-675 2-33 (162)
82 1n7d_A LDL receptor, low-densi 98.8 6.8E-08 2.3E-12 117.3 18.5 90 808-904 277-374 (699)
83 1n7d_A LDL receptor, low-densi 98.8 3.8E-08 1.3E-12 119.5 16.1 175 610-864 183-374 (699)
84 4aqs_A Laminin subunit beta-1; 98.8 5.1E-09 1.8E-13 122.7 8.1 62 841-903 411-475 (525)
85 2p28_B Integrin beta-2; hybrid 98.8 4.4E-09 1.5E-13 106.4 5.6 61 684-758 142-213 (217)
86 1x7a_L Coagulation factor IX, 98.8 5.7E-09 2E-13 99.4 5.6 80 600-682 46-132 (146)
87 1aut_L Activated protein C; se 98.7 1E-08 3.4E-13 93.5 6.7 90 601-695 5-108 (114)
88 1nfu_B Coagulation factor XA, 98.7 2.7E-09 9.2E-14 105.9 2.6 77 600-678 40-123 (195)
89 3m0c_C LDL receptor, low-densi 98.7 1.1E-08 3.8E-13 124.9 8.0 165 626-867 218-395 (791)
90 2vh0_B Activated factor XA lig 98.7 4.5E-09 1.5E-13 98.8 2.6 78 600-679 40-124 (134)
91 3m0c_C LDL receptor, low-densi 98.7 1.6E-08 5.5E-13 123.5 7.1 89 810-905 297-393 (791)
92 3h5c_B Vitamin K-dependent pro 98.6 2.5E-08 8.5E-13 109.3 5.7 80 722-867 4-88 (317)
93 1klo_A Laminin; glycoprotein; 98.6 1.8E-08 6.2E-13 97.8 3.9 29 609-637 2-33 (162)
94 3h5c_B Vitamin K-dependent pro 98.4 1.7E-07 5.9E-12 102.6 7.0 70 601-672 4-76 (317)
95 3u7u_G Neuregulin 1; signaling 98.3 3E-07 1E-11 70.3 3.9 43 716-758 1-48 (55)
96 3p5b_L Low density lipoprotein 98.3 4.4E-07 1.5E-11 102.7 6.1 71 724-859 1-71 (400)
97 3u7u_G Neuregulin 1; signaling 98.3 4.3E-07 1.5E-11 69.4 3.5 44 633-676 1-49 (55)
98 2wg3_C Hedgehog-interacting pr 98.3 1.6E-07 5.6E-12 107.5 1.4 79 810-905 379-457 (463)
99 3v65_B Low-density lipoprotein 98.2 3.2E-07 1.1E-11 103.4 0.6 74 824-904 2-84 (386)
100 3v65_B Low-density lipoprotein 98.1 3.8E-07 1.3E-11 102.8 0.5 79 722-864 2-84 (386)
101 1edm_B Factor IX; epidermal gr 98.0 3.9E-06 1.3E-10 59.7 4.1 36 722-757 2-37 (39)
102 3p5b_L Low density lipoprotein 98.0 2.6E-06 9E-11 96.3 4.5 72 826-904 1-80 (400)
103 2wg3_C Hedgehog-interacting pr 97.9 1.1E-06 3.6E-11 100.7 -0.3 46 707-758 409-454 (463)
104 1edm_B Factor IX; epidermal gr 97.9 8.9E-06 3.1E-10 57.8 3.7 36 640-675 3-38 (39)
105 2v73_A CBM40, putative EXO-alp 97.8 0.00055 1.9E-08 66.3 15.6 109 95-216 40-156 (191)
106 2erf_A Thrombospondin-1; TSP-1 97.7 0.00047 1.6E-08 69.6 14.7 110 95-216 62-181 (209)
107 3zyj_B Netrin-G1; cell adhesio 97.7 1.6E-05 5.4E-10 87.6 3.5 59 815-894 360-418 (426)
108 2k2s_B Micronemal protein 6; m 97.7 5.8E-06 2E-10 64.7 -0.1 42 824-867 10-54 (61)
109 1egf_A Epidermal growth factor 97.6 5E-05 1.7E-09 58.0 4.2 37 722-758 2-43 (53)
110 2k2s_B Micronemal protein 6; m 97.6 8.6E-06 2.9E-10 63.7 -0.6 45 860-907 7-54 (61)
111 3zyj_B Netrin-G1; cell adhesio 97.5 4.2E-05 1.4E-09 84.2 4.4 33 714-754 361-393 (426)
112 2uur_A Collagen alpha-1(IX) ch 97.5 0.00095 3.2E-08 68.9 14.4 130 67-213 62-200 (245)
113 1za4_A Thrombospondin 1; TSP-1 97.5 0.001 3.5E-08 69.1 14.4 110 95-216 72-191 (251)
114 1egf_A Epidermal growth factor 97.5 8.6E-05 2.9E-09 56.7 4.5 37 640-676 3-44 (53)
115 3ca7_A Protein spitz; argos, E 97.4 1.3E-05 4.6E-10 60.9 -1.4 45 848-903 3-48 (52)
116 1a3p_A Epidermal growth factor 97.4 0.00014 4.6E-09 53.4 3.8 29 609-637 10-40 (45)
117 2erf_A Thrombospondin-1; TSP-1 97.3 0.003 1E-07 63.7 14.4 84 292-390 62-148 (209)
118 1a3p_A Epidermal growth factor 97.3 0.00016 5.4E-09 53.1 3.5 35 642-676 2-41 (45)
119 3ca7_A Protein spitz; argos, E 97.3 2.4E-05 8.2E-10 59.5 -1.0 41 624-676 4-48 (52)
120 3flp_A SAP-like pentraxin; phy 97.3 0.0043 1.5E-07 63.0 15.2 123 76-214 15-146 (217)
121 1k36_A Epiregulin; EGF-like fo 97.3 0.00013 4.4E-09 53.6 2.7 36 722-758 2-42 (46)
122 1k36_A Epiregulin; EGF-like fo 97.2 0.00014 4.8E-09 53.4 2.7 36 640-676 3-43 (46)
123 1hae_A Heregulin-alpha; growth 97.2 9.6E-05 3.3E-09 58.8 2.0 34 723-756 6-44 (63)
124 1hae_A Heregulin-alpha; growth 97.2 0.00011 3.7E-09 58.5 2.2 43 603-645 7-54 (63)
125 1za4_A Thrombospondin 1; TSP-1 97.1 0.0056 1.9E-07 63.4 13.8 86 292-392 72-160 (251)
126 2jkh_L Factor X light chain; p 97.0 0.00015 5.2E-09 55.8 1.1 41 826-868 2-46 (55)
127 1kli_L Factor VIIA; extrinsic 97.0 0.00018 6.2E-09 58.0 1.4 44 823-868 3-51 (69)
128 2uur_A Collagen alpha-1(IX) ch 97.0 0.0064 2.2E-07 62.7 13.3 80 290-382 84-171 (245)
129 3kqr_A Serum amyloid P-compone 97.0 0.0099 3.4E-07 59.6 14.0 124 69-214 9-137 (204)
130 3pvn_A C-reactive protein; pen 96.9 0.0083 2.8E-07 60.3 13.3 124 68-213 8-138 (206)
131 1nql_B Epidermal growth factor 96.9 0.00022 7.6E-09 54.1 0.9 34 230-263 11-46 (53)
132 1gl4_A Nidogen-1, entactin; im 96.8 0.0002 7E-09 74.1 0.0 45 823-867 3-49 (285)
133 2kl7_A Fibulin-4; secreted, ca 96.6 0.0013 4.5E-08 53.4 3.8 35 824-858 2-37 (71)
134 2v73_A CBM40, putative EXO-alp 96.6 0.06 2E-06 52.2 15.6 88 290-393 38-130 (191)
135 4b1m_A Levanase; hydrolase, CB 96.6 0.02 7E-07 56.4 12.7 88 95-196 64-158 (185)
136 1nql_B Epidermal growth factor 96.5 0.00097 3.3E-08 50.6 2.3 33 645-677 11-45 (53)
137 1apq_A Complement protease C1R 96.4 0.0014 4.8E-08 49.9 2.6 34 823-858 2-43 (53)
138 1apq_A Complement protease C1R 96.4 0.0018 6.3E-08 49.2 3.1 34 721-756 2-45 (53)
139 1g1s_A P-selectin; selectin, l 96.3 0.00095 3.2E-08 64.6 1.0 42 826-869 120-161 (162)
140 2knc_B Integrin beta-3; transm 96.2 0.00023 8E-09 58.5 -2.9 49 913-964 8-56 (79)
141 1kig_L Factor XA; glycoprotein 96.2 0.0013 4.4E-08 49.5 1.4 35 831-867 4-42 (51)
142 2kl7_A Fibulin-4; secreted, ca 96.1 0.0033 1.1E-07 50.9 3.3 35 722-756 2-39 (71)
143 2jkh_L Factor X light chain; p 96.1 0.0025 8.5E-08 48.9 2.4 30 724-755 2-33 (55)
144 1ob1_C Major merozoite surface 96.0 0.0085 2.9E-07 50.9 5.5 68 682-754 7-84 (99)
145 3flp_A SAP-like pentraxin; phy 96.0 0.076 2.6E-06 53.7 13.6 89 291-393 31-123 (217)
146 3ltf_D Protein spitz; receptor 95.9 0.0018 6E-08 50.1 0.9 32 232-263 15-50 (58)
147 1gl4_A Nidogen-1, entactin; im 95.9 0.0018 6.2E-08 67.0 1.2 40 721-760 3-44 (285)
148 2fd6_A Urokinase-type plasmino 95.8 0.01 3.6E-07 53.9 5.5 58 647-720 2-62 (122)
149 1ob1_C Major merozoite surface 95.7 0.011 3.8E-07 50.2 4.8 31 726-756 7-38 (99)
150 2bz6_L Blood coagulation facto 95.6 0.0029 1E-07 48.0 1.0 35 832-868 6-45 (53)
151 1kli_L Factor VIIA; extrinsic 95.6 0.0055 1.9E-07 49.3 2.6 35 721-755 3-38 (69)
152 2p26_A Integrin beta-2; hybrid 95.5 0.0059 2E-07 63.8 3.1 54 687-754 198-264 (280)
153 4aqt_A Laminin subunit gamma-1 95.4 0.0063 2.2E-07 66.5 3.2 20 581-600 268-287 (375)
154 3ltf_D Protein spitz; receptor 95.4 0.0059 2E-07 47.2 1.9 31 647-677 15-49 (58)
155 2fd6_A Urokinase-type plasmino 95.3 0.011 3.8E-07 53.7 3.9 59 609-676 2-63 (122)
156 2sli_A Intramolecular trans-si 95.3 0.21 7E-06 59.6 15.8 109 95-213 35-158 (679)
157 1g1s_A P-selectin; selectin, l 95.2 0.0054 1.8E-07 59.2 1.6 41 865-908 120-160 (162)
158 3kqr_A Serum amyloid P-compone 95.2 0.23 8E-06 49.5 13.5 84 291-393 30-115 (204)
159 4dqa_A Uncharacterized protein 95.2 0.12 4E-06 56.5 12.2 109 79-214 148-270 (355)
160 1n1i_A Merozoite surface prote 95.1 0.033 1.1E-06 47.5 5.7 69 725-856 12-83 (105)
161 4aqt_A Laminin subunit gamma-1 95.0 0.015 5.3E-07 63.5 4.7 18 659-676 270-287 (375)
162 2jkb_A Sialidase B; intramolec 94.7 0.44 1.5E-05 56.8 16.4 109 95-213 57-180 (686)
163 1q4g_A Prostaglandin G/H synth 94.7 0.013 4.6E-07 67.7 3.2 37 640-676 2-40 (553)
164 1n1i_A Merozoite surface prote 94.4 0.06 2E-06 46.0 5.5 67 682-754 13-85 (105)
165 3pvn_A C-reactive protein; pen 94.3 0.35 1.2E-05 48.3 12.2 84 291-393 30-117 (206)
166 2k9j_B Integrin beta-3; transm 94.3 0.049 1.7E-06 38.8 4.1 37 912-948 6-42 (43)
167 2p26_A Integrin beta-2; hybrid 94.2 0.016 5.6E-07 60.5 2.2 59 648-720 198-274 (280)
168 1szb_A Mannose binding lectin- 94.1 0.0089 3E-07 58.2 0.1 47 814-862 113-166 (170)
169 1q4g_A Prostaglandin G/H synth 94.0 0.021 7.3E-07 66.0 2.9 36 723-758 2-39 (553)
170 3cfw_A L-selectin; EGF, cell a 93.8 0.023 7.9E-07 54.8 2.4 38 832-869 124-161 (164)
171 2l2t_A Receptor tyrosine-prote 93.7 0.1 3.5E-06 37.0 4.8 31 917-948 11-41 (44)
172 3nt1_A Prostaglandin-endoperox 93.7 0.03 1E-06 64.8 3.3 37 640-676 1-39 (587)
173 2jwa_A Receptor tyrosine-prote 93.7 0.1 3.4E-06 37.0 4.6 29 919-948 14-42 (44)
174 2y38_A Laminin subunit alpha-5 93.6 0.098 3.4E-06 57.4 7.1 14 662-675 287-300 (403)
175 3nt1_A Prostaglandin-endoperox 93.5 0.033 1.1E-06 64.4 3.3 36 723-758 1-38 (587)
176 1kig_L Factor XA; glycoprotein 93.4 0.024 8.3E-07 42.4 1.4 21 735-755 10-30 (51)
177 1a8d_A Tetanus neurotoxin; clo 93.4 1.8 6.2E-05 47.0 16.1 113 76-198 65-196 (452)
178 2ygo_A WIF-1, WNT inhibitory f 93.2 0.053 1.8E-06 52.1 3.7 28 871-904 154-181 (188)
179 2ks1_B Epidermal growth factor 93.2 0.11 3.9E-06 36.9 4.4 31 916-947 11-41 (44)
180 2wph_E Coagulation factor IXA 93.0 0.031 1.1E-06 43.3 1.4 32 832-865 6-42 (59)
181 3e50_C Protransforming growth 93.0 0.068 2.3E-06 39.5 3.2 33 870-904 14-46 (50)
182 1xdt_R Hbegf, heparin-binding 92.5 0.04 1.4E-06 44.8 1.5 33 869-903 45-77 (79)
183 2bz6_L Blood coagulation facto 92.5 0.057 2E-06 40.7 2.3 21 735-755 11-32 (53)
184 2i9a_A Urokinase-type plasmino 92.4 0.09 3.1E-06 49.1 4.0 58 609-676 14-75 (145)
185 1iox_A Betacellulin; EGF-like 92.1 0.073 2.5E-06 39.5 2.3 30 833-863 14-45 (50)
186 1szb_A Mannose binding lectin- 92.1 0.044 1.5E-06 53.1 1.4 42 712-755 113-159 (170)
187 3e50_C Protransforming growth 91.6 0.1 3.5E-06 38.6 2.6 31 230-261 13-45 (50)
188 2y38_A Laminin subunit alpha-5 91.3 0.23 7.7E-06 54.5 6.2 14 745-758 287-300 (403)
189 2i9a_A Urokinase-type plasmino 91.3 0.27 9.1E-06 45.9 5.8 58 647-720 14-74 (145)
190 2rnl_A Amphiregulin; AR, color 91.1 0.2 6.7E-06 37.1 3.7 32 870-903 18-49 (50)
191 1xdt_R Hbegf, heparin-binding 91.1 0.081 2.8E-06 43.0 1.8 30 645-675 45-76 (79)
192 1iox_A Betacellulin; EGF-like 91.0 0.094 3.2E-06 38.9 1.9 32 230-262 13-46 (50)
193 2ygo_A WIF-1, WNT inhibitory f 90.7 0.14 4.7E-06 49.2 3.2 29 832-863 152-180 (188)
194 3cfw_A L-selectin; EGF, cell a 90.4 0.13 4.5E-06 49.4 2.9 39 866-907 121-159 (164)
195 4dqa_A Uncharacterized protein 89.7 1.9 6.5E-05 46.9 11.8 33 358-393 213-247 (355)
196 1g1t_A E-selectin; EGF, adhesi 89.3 0.1 3.5E-06 49.7 1.2 35 642-676 121-155 (157)
197 2knc_A Integrin alpha-IIB; tra 89.2 0.7 2.4E-05 34.4 5.2 34 913-946 10-43 (54)
198 2l8s_A Integrin alpha-1; trans 89.1 0.48 1.6E-05 35.1 4.3 35 913-947 7-41 (54)
199 1g1t_A E-selectin; EGF, adhesi 88.9 0.13 4.6E-06 48.8 1.7 35 603-637 120-154 (157)
200 2rnl_A Amphiregulin; AR, color 88.8 0.25 8.4E-06 36.6 2.6 30 231-261 18-49 (50)
201 4b1m_A Levanase; hydrolase, CB 88.0 2.4 8.2E-05 41.3 10.2 84 291-391 63-153 (185)
202 1nzi_A Complement C1S componen 87.5 0.13 4.5E-06 49.0 0.7 46 815-862 107-157 (159)
203 3f1s_B Vitamin K-dependent pro 87.4 0.24 8.3E-06 52.3 2.7 43 824-868 1-48 (283)
204 2e26_A Reelin, reeler protein; 86.6 0.11 3.7E-06 60.7 -0.7 46 810-863 520-565 (725)
205 2e26_A Reelin, reeler protein; 86.3 0.16 5.4E-06 59.3 0.5 29 231-262 190-218 (725)
206 4azz_A Levanase; hydrolase; 1. 85.0 0.18 6.3E-06 48.8 0.0 84 95-193 43-134 (172)
207 2sli_A Intramolecular trans-si 84.0 10 0.00036 44.9 14.7 90 291-393 34-134 (679)
208 3zr5_A Galactocerebrosidase; h 83.8 7.2 0.00025 45.8 13.0 92 95-195 529-624 (656)
209 3v64_C Agrin; beta propeller, 81.2 0.49 1.7E-05 51.6 1.7 36 825-863 1-40 (349)
210 2k1a_A Integrin alpha-IIB; sin 80.5 1.4 4.9E-05 31.0 3.2 31 913-943 8-38 (42)
211 2jkb_A Sialidase B; intramolec 80.2 11 0.00038 44.7 13.1 89 292-393 57-156 (686)
212 2wph_E Coagulation factor IXA 77.9 1.6 5.5E-05 33.5 3.2 26 652-677 11-41 (59)
213 1nzi_A Complement C1S componen 76.6 0.88 3E-05 43.1 1.7 43 712-756 106-151 (159)
214 1s4x_A Integrin beta-3; cell a 75.1 0.14 4.8E-06 40.2 -3.5 36 928-966 11-46 (67)
215 1b9w_A Protein (merozoite surf 73.7 5.4 0.00018 33.2 5.3 66 682-752 7-78 (95)
216 3fl7_A Ephrin receptor; ATP-bi 73.7 1.1 3.8E-05 51.7 1.8 24 731-756 252-275 (536)
217 3u1x_A Putative glycosyl hydro 72.0 6.3 0.00021 40.0 6.8 33 165-197 156-188 (236)
218 3v0a_B NTNH; botulinum neuroto 71.1 51 0.0017 38.9 14.2 110 69-197 878-993 (1196)
219 3fl7_A Ephrin receptor; ATP-bi 65.8 2.1 7.3E-05 49.2 1.9 16 740-755 306-321 (536)
220 2zzj_A Glucuronan lyase A; bet 64.8 53 0.0018 32.8 11.4 61 136-196 109-181 (238)
221 3f1s_B Vitamin K-dependent pro 63.8 3.2 0.00011 43.5 2.7 34 723-756 2-36 (283)
222 1a8d_A Tetanus neurotoxin; clo 62.4 48 0.0016 36.1 11.3 59 333-393 127-191 (452)
223 2k1k_A Ephrin type-A receptor 62.3 6.7 0.00023 26.9 3.1 10 919-928 13-22 (38)
224 3imm_A Putative secreted glyco 60.4 11 0.00036 37.2 5.6 28 168-195 119-146 (201)
225 2nyy_A Botulinum neurotoxin ty 59.7 2.6E+02 0.0088 34.3 17.6 115 68-197 910-1040(1295)
226 3v64_C Agrin; beta propeller, 59.4 3 0.0001 45.2 1.6 31 723-755 1-32 (349)
227 1iij_A ERBB-2 receptor protein 57.7 3.2 0.00011 27.8 0.8 18 927-944 17-34 (35)
228 1b9w_A Protein (merozoite surf 56.3 15 0.00051 30.6 4.7 31 725-755 6-37 (95)
229 1epw_A Bontoxilysin B, botulin 53.6 2.6E+02 0.0088 34.2 16.2 114 68-196 895-1026(1290)
230 2klu_A T-cell surface glycopro 52.0 18 0.00061 27.8 4.1 7 932-938 23-29 (70)
231 3s5q_A Putative glycosylhydrol 51.9 13 0.00043 37.0 4.5 29 167-195 131-159 (214)
232 4a0p_A LRP6, LRP-6, low-densit 51.6 5.5 0.00019 47.0 2.2 38 824-863 264-306 (628)
233 3sov_A LRP-6, low-density lipo 51.3 7.5 0.00026 41.4 3.0 36 826-863 268-309 (318)
234 1ijq_A LDL receptor, low-densi 49.7 7.8 0.00027 41.1 2.8 31 825-857 267-306 (316)
235 2k9y_A Ephrin type-A receptor 46.1 7.5 0.00026 27.1 1.3 10 919-928 16-25 (41)
236 3h3l_A Putative sugar hydrolas 46.0 23 0.00079 35.8 5.5 32 166-197 150-181 (241)
237 2jwa_A Receptor tyrosine-prote 44.5 30 0.001 24.5 4.1 28 923-950 14-41 (44)
238 3s94_A LRP-6, low-density lipo 42.5 8.4 0.00029 45.4 1.8 31 825-857 578-608 (619)
239 3ffz_A Botulinum neurotoxin ty 42.2 5E+02 0.017 31.7 16.2 115 68-197 885-1017(1252)
240 2ks1_B Epidermal growth factor 41.5 21 0.00072 25.4 3.0 14 934-947 25-38 (44)
241 2kv9_B Integrin beta-3; platel 40.6 1.4 4.9E-05 35.1 -3.5 31 933-966 24-54 (75)
242 2k9j_B Integrin beta-3; transm 39.8 36 0.0012 24.0 4.0 32 921-952 11-43 (43)
243 1oq1_A Protein YESU; structura 39.8 1.2E+02 0.0041 29.7 9.0 101 93-196 59-185 (223)
244 2ddu_A Reelin; beta-jelly-roll 37.4 8 0.00027 41.7 0.4 27 730-760 197-223 (387)
245 1ms9_A Trans-sialidase; trans- 36.7 64 0.0022 37.6 7.9 50 165-214 552-604 (648)
246 2vu9_A Botulinum neurotoxin A 35.4 4.4E+02 0.015 28.2 14.5 114 68-197 58-188 (444)
247 3fby_A COMP, cartilage oligome 34.3 27 0.00094 39.3 4.1 32 729-760 27-59 (551)
248 3zr5_A Galactocerebrosidase; h 33.9 1.9E+02 0.0064 33.9 11.3 55 333-391 565-620 (656)
249 3vuo_A NTNHA; protection of bo 33.0 2.4E+02 0.0081 34.5 11.8 90 92-197 896-990 (1196)
250 4azz_A Levanase; hydrolase; 1. 38.7 9.4 0.00032 36.4 0.0 31 359-392 103-133 (172)
251 2l2t_A Receptor tyrosine-prote 31.4 28 0.00096 24.7 2.3 21 930-950 20-40 (44)
252 2k9y_A Ephrin type-A receptor 30.2 38 0.0013 23.4 2.9 13 919-931 13-25 (41)
253 2bqp_A Protein (PEA lectin); D 29.8 4.2E+02 0.014 26.2 12.2 90 96-188 62-178 (234)
254 3fby_A COMP, cartilage oligome 28.7 27 0.00092 39.3 2.8 37 826-862 19-59 (551)
255 2ddu_A Reelin; beta-jelly-roll 28.3 9.3 0.00032 41.2 -0.9 26 833-862 196-223 (387)
256 2klu_A T-cell surface glycopro 27.9 39 0.0013 26.0 2.6 18 918-935 12-29 (70)
257 3gne_A Val-1; alginate lyase, 27.6 85 0.0029 31.6 5.9 50 165-214 159-225 (252)
258 3v0a_B NTNH; botulinum neuroto 27.0 3.6E+02 0.012 32.1 11.4 83 291-391 901-987 (1196)
259 3zyp_A CIP1; metal binding pro 26.3 2E+02 0.007 28.1 8.7 56 135-192 97-160 (218)
260 3t3p_B Integrin beta-3; integr 26.3 30 0.001 38.5 2.6 25 647-675 447-472 (472)
261 2jtd_A Myomesin-1, skelemin; i 24.4 1.2E+02 0.0042 26.8 5.5 55 135-189 43-102 (142)
262 3t3p_B Integrin beta-3; integr 24.4 37 0.0013 37.8 2.9 14 707-720 459-472 (472)
263 2knc_B Integrin beta-3; transm 22.7 87 0.003 25.4 4.1 28 913-940 11-38 (79)
264 1dhk_B Bean lectin-like inhibi 22.4 2.1E+02 0.0073 28.2 7.8 79 96-187 61-150 (223)
265 2l8s_A Integrin alpha-1; trans 21.8 1.5E+02 0.0053 21.9 4.8 14 934-947 25-38 (54)
266 2ltn_A PEA lectin, alpha chain 21.4 3.3E+02 0.011 25.8 8.7 47 134-181 113-169 (181)
267 1w0p_A Sialidase; hydrolase, n 21.4 1.3E+02 0.0044 36.1 7.0 83 94-193 91-178 (781)
268 1fx5_A UEA-I, UE-I, anti-H(O) 21.1 6.2E+02 0.021 25.1 12.4 53 134-187 119-185 (242)
269 1aqs_A Cu-MT, Cu-metallothione 21.0 88 0.003 21.5 3.1 7 849-855 23-29 (53)
270 2knc_A Integrin alpha-IIB; tra 20.6 2E+02 0.0069 21.3 5.2 14 934-947 28-41 (54)
271 3t5o_A Complement component C6 20.6 66 0.0023 39.6 4.4 35 605-639 500-534 (913)
272 1f9k_A Acidic lectin; legume l 20.4 2.7E+02 0.0093 27.7 8.3 54 134-188 117-179 (238)
273 1ijq_A LDL receptor, low-densi 20.0 58 0.002 34.1 3.4 22 735-756 282-309 (316)
No 1
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=4.8e-44 Score=461.40 Aligned_cols=504 Identities=18% Similarity=0.287 Sum_probs=328.8
Q ss_pred CCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEEEEEEeCCcc
Q psy9685 77 TNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTP 156 (979)
Q Consensus 77 ~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~~~~~~g~~~ 156 (979)
++||+.++.+... ..++|+|+|||.+++|||||+++.. .....+..+.....|||+|+|.+|+|+|+|++|+++
T Consensus 429 ~~syl~lp~~~~~-----~~~~is~~FrT~~~~GlLly~~~~~-~~~~~~~~~~~~~~df~~LeL~~G~l~l~~~~G~g~ 502 (1245)
T 3qcw_A 429 PESFISLPKWNAK-----KTGSISFDFRTTEPNGLILFSHGKP-RHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGT 502 (1245)
T ss_dssp TTCCEEECCCCCS-----SEEEEEEEEECCCSCEEEEEEECCC-CSSCCSSCTTSCCCCEEEEEEETTEEEEEEESSSCE
T ss_pred CCeEEEecCCCcc-----CceEEEEEEEeCCCCeEEEEecCcc-ccccccccccccCCCEEEEEEeCCeEEEEEECCCCe
Confidence 6799999876544 6789999999999999999987421 000011122334679999999999999999999997
Q ss_pred eEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEEecCcccccccc-eeEEcCCCCccc----------------c
Q psy9685 157 ESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRKTISSTGILDVQ-VLYLGGIPETVH----------------H 219 (979)
Q Consensus 157 ~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~l~~~-~lyvGG~p~~~~----------------~ 219 (979)
..++.+..++|||+||+|+|.|+++.++|+||+.......++....+++. +|||||+|.... .
T Consensus 503 ~~l~~s~~~vnDG~WH~V~l~r~~~~~~L~VD~~~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~p~~~~~~~~~~gF 582 (1245)
T 3qcw_A 503 IKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGLVFPTEVWTALLNYGY 582 (1245)
T ss_dssp EEEESCSSCCCSSCCEEEEEEEETTEEEEEETTEEEEEECSSSCCCCCCCSCEEESSCCSSCTTCCCCTTCHHHHTTCBC
T ss_pred EEEeecccEecCCCEEEEEEEEecCEEEEEEcccccccccCCCcceeccCCceEEcccccccccccccccccccccccCc
Confidence 66666678999999999999999999999999987655566677778877 999999997531 1
Q ss_pred ccccc-------------------------------CCCccCCCCCCCCccccCCCCeeeecC-CCCCCCCcccccCccc
Q psy9685 220 HRSIR-------------------------------SPYQPSRSYPSGGHCTDLWRDFSCSCV-RPFLGHTCQYNFTAAT 267 (979)
Q Consensus 220 ~~~~~-------------------------------~~~~~~~pc~~~G~C~~~~~~~~C~C~-~~~~g~~C~~~~~~~~ 267 (979)
.++|| ...+.++||.|+|.|++.|+.|.|+|+ .+|.|+.|+.+.....
T Consensus 583 ~GCir~l~ing~~~dl~~~~~~~~~~gv~~gC~~~~~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~~~~~~~ 662 (1245)
T 3qcw_A 583 VGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLS 662 (1245)
T ss_dssp CEEEEEEEETTEEECHHHHTTTTTCTTEESSCCCCSSCGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCEECCEEE
T ss_pred eEEEEEEEECCEEcCchhhhhhhccccccccccccCCCCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcccccccc
Confidence 11111 012356799999999999999999999 5999999998776666
Q ss_pred ccCCCcceeeEEEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEE
Q psy9685 268 FGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRL 347 (979)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~ 347 (979)
|.+.++..+ .++.. ......+|+|.|||++++|+|||.+.. +..||++|+|.+|+|++++
T Consensus 663 fdGs~~l~~--~~~~~-----~~~~~~~isl~FrT~~~~GlLl~~~~~-------------~~~d~l~L~L~~G~l~l~~ 722 (1245)
T 3qcw_A 663 YDGSMFMKI--QLPVV-----MHTEAEDVSLRFRSQRAYGILMATTSR-------------DSADTLRLELDAGRVKLTV 722 (1245)
T ss_dssp EESSCCEEE--EEEEE-----EEESEEEEEEEEECSSSCEEEEEEEBT-------------TBSCEEEEEEETTEEEEEE
T ss_pred cCCCCceEE--ecccc-----cccccceEEEEEEEcCCCEEEEEecCC-------------CCccEEEEEEeCCEEEEEE
Confidence 766443322 11111 123457899999999999999998653 1569999999999999999
Q ss_pred EcCCcCceeeecCeeecCCCeeEEEEEeecceeeeEEEEEccCCCcccccccccCCCCCCCCCCcccccccccccccccc
Q psy9685 348 QFNSTPESYNVGGVKLADGNNHLIQTISSTGILDVQVLYLGGIPETVHHHRSIRSPYQPSRSYPRWATYDEMENYTTARR 427 (979)
Q Consensus 348 ~~g~~~~~~~~~~~~l~DG~wH~V~~~~~~~~l~l~vlyvGG~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (979)
++|+++..+ .....++||+||.|.+.+.++.+.|. |.+.+.... ...+....+. ..++..+..
T Consensus 723 nlg~g~~~~-~~~~~~~DG~WH~V~v~r~~~~~~l~---vD~~~~~~g---~~~g~~~~l~----------~~~~~~G~~ 785 (1245)
T 3qcw_A 723 NLGKGPETL-FAGYNLNDNEWHTVRVVRRGKSLKLT---VDDQQAMTG---QMAGDHTRLE----------FHNIETGII 785 (1245)
T ss_dssp ESSSSEEEE-EECSCCCSSSCEEEEEEEETTEEEEE---ETTSCCEEE---ECSSSCCCEE----------EEEEEESSC
T ss_pred ECCCCceEE-EeCccccCCCcEEEEEEEeCCEEEEE---ECCccceeE---ecCCCcceee----------ccccccccc
Confidence 999887644 45678999999999999998876553 333221000 0000000000 000000000
Q ss_pred ccccccCCccccCCCCCcceeEeEEEEE---------------e------------------ecCCCCccCCCC----CC
Q psy9685 428 RYSRQTAGEKQFSPLPNFKGIIHDVQIY---------------F------------------ISGSGDRSSPSS----NG 470 (979)
Q Consensus 428 ~~~~~~~g~~~~~~~~~F~Gci~~v~i~---------------~------------------~~~~~~~~lp~~----~g 470 (979)
... ...-..+.+|+|||++++++ | ......+.+|.. ..
T Consensus 786 ~~~-----~~~~~~~~~F~GCl~~v~~ng~~~~~~~~~g~~~~C~~~~~~g~~~~~~~~~~F~~~~sy~~~p~~~~~~~~ 860 (1245)
T 3qcw_A 786 TER-----RYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYTSM 860 (1245)
T ss_dssp CCC-----TTCSCCCCCCEEEEEEEEETTEEHHHHHHTTSCSCEEECCEESCCCCCCSCEEECSTTCEEEESCCCCSSCE
T ss_pred ccc-----cccCCCCCCCEEEeeeEEECCEEchhhhhcCCccccccccccCccccccCCccccccccEEEcCCccccceE
Confidence 000 00001234699999998873 1 112222233321 11
Q ss_pred CCCc--ccc---------------chhcccccceEEEEeeeCCCceeeee-cceeecCCCceEEEeCCCC-c--eeeeec
Q psy9685 471 AGSE--ETS---------------YIAAEMEAGELFVRLQFNSTPESYNV-GGVKLADGNNHLIQVGPGF-D--FQRIDH 529 (979)
Q Consensus 471 ~~~~--rt~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~-~--~~~~~~ 529 (979)
.++| ||+ |++.++..+++.+.+++++....+.+ ....++|++||.|++.... . +..++.
T Consensus 861 ~is~~frT~~~~GlLly~~~~~~dfi~l~L~~G~l~~~~~~G~g~~~~~~~s~~~vnDg~WH~V~~~~~~~~~~~L~VD~ 940 (1245)
T 3qcw_A 861 HLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDT 940 (1245)
T ss_dssp EEEEEEECSCSCEEEEEEEESTTCEEEEEEETTEEEEEEESSSCCEEEECCCSSCSCSSSCEEEEEEECTTCEEEEEETT
T ss_pred EEEEEEEeCCCCEEEEEeCCCCCCEEEEEEeCCEEEEEEECCCCcEEEEecCcccccCCCeEEEEEEEeCCeeEEEEECC
Confidence 2333 665 66677777888888887776655543 5678999999999886532 1 222221
Q ss_pred ccc----cC--e--eE-EEEecCccc---c----cccccccccccccccccceeeeecccCCCCCCCCCCCceEECCCCc
Q psy9685 530 PFT----KK--H--VI-VCVLNAHQL---S----GISDQADLVRCTSEAYLNLIIYISWLLSPHDSDPLTSYACKCPAGY 593 (979)
Q Consensus 530 ~~~----~~--~--~~-~~~~~~~~~---~----~~~~~~~~~gC~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~C~~G~ 593 (979)
-.. .+ . +. .+.+..... . ......+|.||+++++++....... . ..... .+-
T Consensus 941 ~~~~~~~~~~~~l~~~~~lylGG~p~~~~~~~~~~~~~~~~F~GCi~~l~ing~~~~l~-----~----~~~~~---~~~ 1008 (1245)
T 3qcw_A 941 KITTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLI-----S----DALFC---NGQ 1008 (1245)
T ss_dssp EEEEEECCCCCCCCEEEEEEESCCCGGGGGGCCTTCCCSSBCCEEEEEEEETTBCCCTT-----T----TCSEE---ESC
T ss_pred EeeeeccCCcceeccCCCeEECcccccchhhhcccccccCCcEEEeeeEEECCEEcccc-----c----chhcc---ccc
Confidence 000 00 0 00 112222111 0 1123468999999999984421100 0 00000 111
Q ss_pred cCCCCCCCCCCCCCCCCCCCCeeccCCCceeeecC-CCCCCCcccccc
Q psy9685 594 SSETCAVDIDECVTHNCQNGARCIDGVARYSCECT-PGWEGALCEKEI 640 (979)
Q Consensus 594 ~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~-~G~~G~~C~~~~ 640 (979)
....|....+.|...||.+++.|...+..|.|.|+ +||.|+.|+.+.
T Consensus 1009 v~~gC~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1009 IERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp EEESSSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCC
T ss_pred eeeeeecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCC
Confidence 12346545578999999999999999999999999 699999997544
No 2
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=100.00 E-value=8.9e-46 Score=477.56 Aligned_cols=476 Identities=20% Similarity=0.298 Sum_probs=181.5
Q ss_pred cccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeC-cEEEEE
Q psy9685 71 FGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA-GELFVR 149 (979)
Q Consensus 71 Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~-G~l~~~ 149 (979)
|.+ ++.||+.|+.|++. .+.+|+|+|||.+++|||||.++. ...|||+|+|++ |+|+|+
T Consensus 3 f~g--~~~~~~~~~~~~~~-----~~~~ls~~frT~~~~glllY~~~~-------------~~~df~~l~l~~~G~~~~~ 62 (1245)
T 3qcw_A 3 FPG--AEGQWTRFPKWNAC-----CESEMSFQLKTRSARGLVLYFDDE-------------GFCDFLELILTRGGRLQLS 62 (1245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCC--CCccceeccccccC-----CCCEEEEEEEcCCCCeEEEEecCC-------------CCCCeEEEEEecCCeEEEE
Confidence 544 78999999987666 778999999999999999998852 257999999999 999999
Q ss_pred EEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeE-EEecCcccccccc-eeEEcCCCCcccc--------
Q psy9685 150 LQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYF-RKTISSTGILDVQ-VLYLGGIPETVHH-------- 219 (979)
Q Consensus 150 ~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~-~~~~~~~~~l~~~-~lyvGG~p~~~~~-------- 219 (979)
|++|.+...++.+..+||||+||+|+|.|.++.++|+||+.+.. .........++.. .|||||+|.....
T Consensus 63 ~~~g~~~~~~~~~~~~v~dg~Wh~v~v~r~~~~~~L~Vd~~~~~~~~~~~~~~~~~~~~~l~vGG~p~~~~~~~~~l~~~ 142 (1245)
T 3qcw_A 63 FSIFCAEPATLLTDTPVNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLA 142 (1245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EECCCCCceEEecCceeCCCCcEEEEEEEecCeEEEEECCccceeeeecCCcccccccCceeeeeCChHHhcccccccCc
Confidence 99997744444567899999999999999999999999995322 2222223334444 8999999986432
Q ss_pred --------cccccCCC----------------------------c------cCCCCCCCCccccCCCCeeeecCC-CCCC
Q psy9685 220 --------HRSIRSPY----------------------------Q------PSRSYPSGGHCTDLWRDFSCSCVR-PFLG 256 (979)
Q Consensus 220 --------~~~~~~~~----------------------------~------~~~pc~~~G~C~~~~~~~~C~C~~-~~~g 256 (979)
.++|++.. + ...||.|||+|+..+.+|.|+|+. +|.|
T Consensus 143 ~v~~~~~F~Gci~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~pC~~~~~~~~~~C~ngg~C~~~~~~~~C~C~~~g~~G 222 (1245)
T 3qcw_A 143 SVREREPFKGWIRDVRVQSSLALPVDSGEVKLDDEPPNSGGGSPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRG 222 (1245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCcceEEEEEEECCcccccccccCcccccccccccCCCCcCCcccCCCCCCCCCCCCccCCCCceeECCCCCccC
Confidence 11122110 0 123899999999999999999997 9999
Q ss_pred CCcccccCc--ccccCCCcceeeEEEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceE
Q psy9685 257 HTCQYNFTA--ATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYI 334 (979)
Q Consensus 257 ~~C~~~~~~--~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l 334 (979)
+.|+..... ++|.+.+ ++.++.... ........|+|+|||.+++|||||.+. ..|||
T Consensus 223 ~~Ce~~~~~~~~~F~G~~----~~~y~~~~~--~~~~~~~~i~l~FrT~~~~GlLl~~g~---------------~~d~l 281 (1245)
T 3qcw_A 223 KDCSQGKEEYIATFKGSE----YFCYDLSQN--PIQSSSDEITLSFKTLQRNGLMLHTGK---------------SADYV 281 (1245)
T ss_dssp --------CCEEEECSSC----EEEEECTTS--CEEESEEEEEEEEECSCSCEEEEEECS---------------SSEEE
T ss_pred CccccCcccceeeeCCcE----EEEEccccC--cccccccEEEEEEEeCCCCceEEEecC---------------CCCEE
Confidence 999965333 5566633 222222211 112335789999999999999999964 56999
Q ss_pred EEEEecCEEEEEEEcCCcCceee--ecCeeecCCCeeEEEEEeecceeeeEE----------------------EEEccC
Q psy9685 335 AAEMEAGELFVRLQFNSTPESYN--VGGVKLADGNNHLIQTISSTGILDVQV----------------------LYLGGI 390 (979)
Q Consensus 335 ~l~l~~G~l~~~~~~g~~~~~~~--~~~~~l~DG~wH~V~~~~~~~~l~l~v----------------------lyvGG~ 390 (979)
+|+|.+|+|.+++++|++..... .....++||+||+|.+.|..+.+.|.| |||||+
T Consensus 282 ~L~L~~G~l~l~~~lG~g~~~~~~~~~~~~l~Dg~WH~V~v~r~~~~~~l~VD~~~~~~~~~~~~~~~l~~~~~l~vGG~ 361 (1245)
T 3qcw_A 282 NLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGS 361 (1245)
T ss_dssp EEEEETTEEEEEEEESSCCEEEEECCCSSCSSSSSCEEEEEEEETTEEEEEESSSCCEEEECSSSCCCEEECSEEEESCC
T ss_pred EEEEECCEEEEEEEcCCCeEEEEEccCCcccCCCCEEEEEEEEeCCEEEEEECCcceeeeecCCCcccccCCCCEEECCc
Confidence 99999999999999999875422 345689999999999999887776643 899999
Q ss_pred CCcccccccccCCCCCCCCCCccccccccccccccccccccccCCccccCCCCCcceeEeEEEEE---------------
Q psy9685 391 PETVHHHRSIRSPYQPSRSYPRWATYDEMENYTTARRRYSRQTAGEKQFSPLPNFKGIIHDVQIY--------------- 455 (979)
Q Consensus 391 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~F~Gci~~v~i~--------------- 455 (979)
|...... ... -.++|.|||++|.++
T Consensus 362 p~~~~~~----~~~------------------------------------~~~~F~GCi~~l~~n~~~i~l~~~~~~~~~ 401 (1245)
T 3qcw_A 362 PSTADLP----GSP------------------------------------VSNNFMGCLKEVVYKNNDVRLELSRLAKQG 401 (1245)
T ss_dssp SSTTTST----TCC------------------------------------CCCCCCEEEEEEEEEESSCEECHHHHHHSC
T ss_pred CChhhcc----CCc------------------------------------cCCCceeEeeeeEECCccccccchhhhhcC
Confidence 9753210 000 012355555555552
Q ss_pred ------------------------eecCCCCccCCCCC----CCCC--cccc----------------------------
Q psy9685 456 ------------------------FISGSGDRSSPSSN----GAGS--EETS---------------------------- 477 (979)
Q Consensus 456 ------------------------~~~~~~~~~lp~~~----g~~~--~rt~---------------------------- 477 (979)
|..+...+.+|... ..++ |||.
T Consensus 402 ~~~~~~~g~~~~~C~~~~~~~~vsF~~~~syl~lp~~~~~~~~~is~~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~d 481 (1245)
T 3qcw_A 402 DPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVD 481 (1245)
T ss_dssp CTTEEEESSCCCCCSCCCCCCCEEECSTTCCEEECCCCCSSEEEEEEEEECCCSCEEEEEEECCCCSSCCSSCTTSCCCC
T ss_pred CCccccCCceeecccCCCccccceeCCCCeEEEecCCCccCceEEEEEEEeCCCCeEEEEecCccccccccccccccCCC
Confidence 11122222222111 1122 2443
Q ss_pred chhcccccceEEEEeeeCCCceeeeecceeecCCCceEEEeCCCCceeeeec-----cccc-Ce---e---EEEEecCcc
Q psy9685 478 YIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQVGPGFDFQRIDH-----PFTK-KH---V---IVCVLNAHQ 545 (979)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-----~~~~-~~---~---~~~~~~~~~ 545 (979)
+.+.++..+++.+.+++++....+......++|+.||.|++........+.. ++.. +. + ..+.++...
T Consensus 482 f~~LeL~~G~l~l~~~~G~g~~~l~~s~~~vnDG~WH~V~l~r~~~~~~L~VD~~~~~~~~~~~~~~l~~~~~lylGG~p 561 (1245)
T 3qcw_A 482 FFAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLP 561 (1245)
T ss_dssp EEEEEEETTEEEEEEESSSCEEEEESCSSCCCSSCCEEEEEEEETTEEEEEETTEEEEEECSSSCCCCCCCSCEEESSCC
T ss_pred EEEEEEeCCeEEEEEECCCCeEEEeecccEecCCCEEEEEEEEecCEEEEEEcccccccccCCCcceeccCCceEEcccc
Confidence 3455666677777888777665566667889999999998854311111110 0000 00 0 001111111
Q ss_pred cc----cc-------cccccccccccccccceeeeecccCCCCCCCCCCCceEECCCCccCCCCCC-CCCCCCCCCCCCC
Q psy9685 546 LS----GI-------SDQADLVRCTSEAYLNLIIYISWLLSPHDSDPLTSYACKCPAGYSSETCAV-DIDECVTHNCQNG 613 (979)
Q Consensus 546 ~~----~~-------~~~~~~~gC~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~C~~G~~g~~C~~-~~~~C~~~~C~~~ 613 (979)
.. .. ....+|.||++++.++..++.-....... ...+ ....|.. ..+.|.+.||.++
T Consensus 562 ~~~~~~~~p~~~~~~~~~~gF~GCir~l~ing~~~dl~~~~~~~-~~~g----------v~~gC~~~~~~~C~~~pC~ng 630 (1245)
T 3qcw_A 562 ENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQ-STAG----------VKPSCSRETAKPCLSNPCKNN 630 (1245)
T ss_dssp SSCTTCCCCTTCHHHHTTCBCCEEEEEEEETTEEECHHHHTTTT-TCTT----------EESSCCCCSSCGGGSCCCCTT
T ss_pred cccccccccccccccccccCceEEEEEEEECCEEcCchhhhhhh-cccc----------ccccccccCCCCCCccCCCCC
Confidence 00 00 12468999999999985543211110000 0000 0123432 2467999999999
Q ss_pred CeeccCCCceeeecC-CCCCCCcccc
Q psy9685 614 ARCIDGVARYSCECT-PGWEGALCEK 638 (979)
Q Consensus 614 ~~C~~~~g~~~C~C~-~G~~G~~C~~ 638 (979)
+.|.+.+..|.|.|+ .||.|..|+.
T Consensus 631 g~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 631 GMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp CEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CEEeCCCCCeEEECCCCCcccccCcc
Confidence 999999999999999 7999999975
No 3
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=100.00 E-value=4.9e-41 Score=384.62 Aligned_cols=276 Identities=20% Similarity=0.308 Sum_probs=211.4
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+++|.. .+||++|+.+... ..++|+|+|||++++|||||+++. ..|||+|+|.+|+|+
T Consensus 7 ~v~F~~---~~Syl~~p~~~~~-----~~~~is~~frT~~~~GlLly~~~~--------------~~dfi~l~L~~G~l~ 64 (410)
T 3asi_A 7 PVTFKT---KSSYVALATLQAY-----TSMHLFFQFKTTSLDGLILYNSGD--------------GNDFIVVELVKGYLH 64 (410)
T ss_dssp CEEECS---TTCEEEESCCCCS-----SCEEEEEEEECSCSCEEEEEEEBS--------------TTCEEEEEEETTEEE
T ss_pred ccEeCC---CCeeEEeCCCCCC-----ceEEEEEEEEeCCCCeEEEEeCCC--------------CCCEEEEEEECCEEE
Confidence 567753 5799999885433 678999999999999999998731 469999999999999
Q ss_pred EEEEeCCcceEEee-cCeeecCCCcEEEEEEEEceE-EEEEECCEEeEEEecCcccccccc-eeEEcCCCCccc------
Q psy9685 148 VRLQFNSTPESYNV-GGVKLADGNNHLIQVVRNVTL-VQVKLNGTEYFRKTISSTGILDVQ-VLYLGGIPETVH------ 218 (979)
Q Consensus 148 ~~~~~g~~~~~~~~-~~~~lnDg~WH~V~v~r~~~~-~~L~VD~~~~~~~~~~~~~~l~~~-~lyvGG~p~~~~------ 218 (979)
|+|++|+++..++. +..++|||+||+|+|.|.++. ++|+||+........+ ...+++. +|||||+|....
T Consensus 65 ~~~~~G~g~~~~~~~s~~~vnDg~WH~V~v~r~~~~~~~l~VD~~~~~~~~~~-~~~l~~~~~lyvGG~p~~~~~~~~~~ 143 (410)
T 3asi_A 65 YVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAG-ARNLDLKSDLYIGGVAKETYKSLPKL 143 (410)
T ss_dssp EEEESSSCEEEEECCCSSCSCSSSCEEEEEEECTTCEEEEEETTEEEEEECTT-CCCCCBCSCEEESCCCGGGGGGSCTT
T ss_pred EEEECCCCcEEEEeccCcEeCCCCeEEEEEEEcCCceEEEEECCEeceeccCC-ccceecCCceEECccccchhhhhhhh
Confidence 99999998776653 668999999999999999864 7999999876554444 3556766 999999996421
Q ss_pred ------cccccc------------C-----------------CCccCCCCCCCCccccCCCCeeeecCC-CCCCCCcccc
Q psy9685 219 ------HHRSIR------------S-----------------PYQPSRSYPSGGHCTDLWRDFSCSCVR-PFLGHTCQYN 262 (979)
Q Consensus 219 ------~~~~~~------------~-----------------~~~~~~pc~~~G~C~~~~~~~~C~C~~-~~~g~~C~~~ 262 (979)
..++|+ + ..+..+||.|+|.|++.|++|.|+|+. +|.|+.|+..
T Consensus 144 ~~~~~~F~GCi~~l~ing~~~dl~~~~~~~~~~v~~gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 144 VHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp CCCSSBCCEEEEEEESSSCCCCTTTTCSEEESSEEESCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred cccccCchhheeheeeCCcccCchhhhhccCCccCCCCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 111111 0 112457999999999999999999997 9999999988
Q ss_pred cCcccccCCCcceeeEEEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCE
Q psy9685 263 FTAATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGE 342 (979)
Q Consensus 263 ~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~ 342 (979)
.....|+. .++++.+...... .......+|+|.|||++++|+|||.+... ...||++|+|++|+
T Consensus 224 ~~~~~f~~---~~~~~~~~~~~~~-~~~~~~~~i~l~frT~~~~GlLl~~~~~~------------~~~~~l~l~L~~G~ 287 (410)
T 3asi_A 224 GTTYIFSK---GGGQITYKWPPND-RPSTRADRLAIGFSTVQKEAVLVRVDSSS------------GLGDYLELHIHQGK 287 (410)
T ss_dssp CCEEEEEE---EEEEEEEECCTTC-CCCBSEEEEEEEEECCCSEEEEEEEEECT------------TCCCEEEEEEETTE
T ss_pred cccccccC---CCceEEEecCCCC-CccceeeEEEEEEEeCCCCEEEEEEecCC------------CCCceEEEEEeCCE
Confidence 77666652 1223333221111 11123457999999999999999986421 13599999999999
Q ss_pred EEEEEEcCCcCceeeecCeeecCCCeeEEEEEeecceeee
Q psy9685 343 LFVRLQFNSTPESYNVGGVKLADGNNHLIQTISSTGILDV 382 (979)
Q Consensus 343 l~~~~~~g~~~~~~~~~~~~l~DG~wH~V~~~~~~~~l~l 382 (979)
|++++++|++...+..+...++||+||+|.+.+.++.+.|
T Consensus 288 l~~~~~~g~~~~~~~~~~~~l~DG~wH~V~v~r~~~~~~L 327 (410)
T 3asi_A 288 IGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATL 327 (410)
T ss_dssp EEEEEESSSSCEEEECCSCCCCSSSCEEEEEEEETTEEEE
T ss_pred EEEEEECCCCceEEecCccCcCCCCeEEEEEEEECCEEEE
Confidence 9999999987665555568899999999999999887544
No 4
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=100.00 E-value=1.6e-38 Score=361.71 Aligned_cols=278 Identities=19% Similarity=0.235 Sum_probs=205.0
Q ss_pred CCCcceeeEeeeccCccccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCC
Q psy9685 51 SFPTTTNFTFVTSPDFTAATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAG 130 (979)
Q Consensus 51 ~~~c~~~~~~~~~~~~~a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~ 130 (979)
..+|+.+..+.+..+ |.+||+ .++||+.++. .+..++..++|+|+|||.+++|||||+++.
T Consensus 20 ~~~C~~~~~~~~~~~--a~~Fg~--~~~s~~~~~~---~~~~~~~~~~is~~frT~~~~GlLly~~~~------------ 80 (394)
T 1dyk_A 20 HGPCVAESEPALLTG--SKQFGL--SRNSHIAIAF---DDTKVKNRLTIELEVRTEAESGLLFYMARI------------ 80 (394)
T ss_dssp CCSSCCCCCCCBCTT--CEECCS--STTCEEEEEC---CGGGGSSEEEEEEEEEECCSCEEEEEEECT------------
T ss_pred CCccCCCcccccccc--ceecCC--CCCcEEEEEc---CccccccceEEEEEEEeCCCCeEEEEcCCC------------
Confidence 346999999988888 999999 6889999987 344456899999999999999999998741
Q ss_pred CCCCCEEEEEEeCcEEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEEecCcccccccc-eeE
Q psy9685 131 SEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRKTISSTGILDVQ-VLY 209 (979)
Q Consensus 131 ~~~~dfi~l~L~~G~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~l~~~-~ly 209 (979)
...|||+|+|++|+|+++|++|+++..+. +..++|||+||+|+|.|+++.++|+||+.......++....+++. +||
T Consensus 81 -~~~dfi~l~L~~G~l~~~~~~g~g~~~~~-~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~g~~~~l~~~~~l~ 158 (394)
T 1dyk_A 81 -NHADFATVQLRNGFPYFSYDLGSGDTSTM-IPTKINDGQWHKIKIVRVKQEGILYVDDASSQTISPKKADILDVVGILY 158 (394)
T ss_dssp -TSSSEEEEEEETTEEEEEEESSSCEEEEE-CCSCCCSSSCEEEEEEEETTEEEEEETTEEEEEECSTTCCCCCCCSEEE
T ss_pred -CCCceEEEEEECCEEEEEEECCCCceEEE-cccccCCCCEEEEEEEEeCCEEEEEEcCcccceecCCCCceecCCCCEE
Confidence 14799999999999999999999866554 457999999999999999999999999988766666667778877 999
Q ss_pred EcCCCCcccc----------cccccCCCccCCCCCCCCccccCCCCeeeecCCCCCCCCcccccCc-ccccCCCcceeeE
Q psy9685 210 LGGIPETVHH----------HRSIRSPYQPSRSYPSGGHCTDLWRDFSCSCVRPFLGHTCQYNFTA-ATFGHENTTNSLV 278 (979)
Q Consensus 210 vGG~p~~~~~----------~~~~~~~~~~~~pc~~~G~C~~~~~~~~C~C~~~~~g~~C~~~~~~-~~f~~~~~~~~~~ 278 (979)
|||+|..... .++|++......+ ++.++... .+.+..|...... ..|.. . +++
T Consensus 159 vGG~p~~~~~~~~~~~~~~F~GCi~~l~in~~~-------~~l~~~~~-----~~~~~~C~~~~~~g~~F~g---~-gy~ 222 (394)
T 1dyk_A 159 VGGLPINYTTRRIGPVTYSLDGCVRNLHMEQAP-------VDLDQPTS-----SFHVGTCFANAESGTYFDG---T-GFA 222 (394)
T ss_dssp ESSCCTTCCCCSSCSCCSBCSEEEEEEEESSSC-------CCTTSCSE-----EESCBCCBSSEEESEEEEE---E-EEE
T ss_pred EcccCCcccccccccCCCCccEeeeEEEECCEE-------ecCCCccc-----cCcCCCCCCCCccCceeCC---C-cee
Confidence 9999975422 1222222211111 11111100 1123345433211 23332 1 122
Q ss_pred EEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeee
Q psy9685 279 TVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNV 358 (979)
Q Consensus 279 ~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~ 358 (979)
.+. ..+.....++|+|+|||++++|+|||.+.. ..||++|+|++|+|++++++|.+...+..
T Consensus 223 ~~~----~~~~~~~~~~is~~frT~~~~GlLl~~~~~--------------~~~~l~l~L~~G~l~~~~~~g~~~~~~~~ 284 (394)
T 1dyk_A 223 KAV----GGFKVGLDLLVEFEFRTTRPTGVLLGVSSQ--------------KMDGMGIEMIDEKLMFHVDNGAGRFTAIY 284 (394)
T ss_dssp ECC----SSBCCBSEEEEEEEEEESCSCEEEEEEECS--------------SSCEEEEEEETTEEEEEEESSSCCEEEEE
T ss_pred EEc----CCcccCCceEEEEEEEeCCCCEEEEEecCC--------------CCCEEEEEEECCEEEEEEECCCCcEEEEE
Confidence 211 123355678999999999999999998532 56999999999999999999987654443
Q ss_pred ---cCeeecCCCeeEEEEEeecceeeeE
Q psy9685 359 ---GGVKLADGNNHLIQTISSTGILDVQ 383 (979)
Q Consensus 359 ---~~~~l~DG~wH~V~~~~~~~~l~l~ 383 (979)
....|+||+||+|.+.+.++.+.|.
T Consensus 285 ~~~~~~~l~DG~WH~V~v~~~~~~~~L~ 312 (394)
T 1dyk_A 285 DAEIPGHMCNGQWHKVTAKKIKNRLELV 312 (394)
T ss_dssp CCCSTTSTTSSSCEEEEEEEETTEEEEE
T ss_pred ecCCCccccCCceEEEEEEEeCCEEEEE
Confidence 3678999999999999998887664
No 5
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=100.00 E-value=2.3e-38 Score=359.80 Aligned_cols=288 Identities=20% Similarity=0.282 Sum_probs=207.9
Q ss_pred CCcceeeEeeeccCccccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCC
Q psy9685 52 FPTTTNFTFVTSPDFTAATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGS 131 (979)
Q Consensus 52 ~~c~~~~~~~~~~~~~a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~ 131 (979)
..|+.+..|.+.++ |++||+ +++||+.|+.. +..++..++|+|+|||.+++|||||+++.
T Consensus 7 ~~C~~~~~~~~~~~--a~~Fg~--~~~S~~~~~~~---~~~~~~~~~is~~frT~~~~GlLly~~~~------------- 66 (383)
T 2jd4_A 7 ELCAVDTAPGYVAG--AHQFGL--SQNSHLVLPLQ---QSDVRKRLQVQLSIRTFASSGLIYYVAHQ------------- 66 (383)
T ss_dssp CCCCCCCCCCBCTT--CEECCS--STTCEEEEECC---SCCCSSEEEEEEEEEECCSCEEEEEEECT-------------
T ss_pred CcccCCCCCcccCc--ccccCC--CCCeeEEEeCC---chhcccceEEEEEEEcCCCCeEEEEeCCC-------------
Confidence 47998888888888 999999 67999999973 23345789999999999999999998741
Q ss_pred CCCCEEEEEEeCcEEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEEe-cCcccccccc-eeE
Q psy9685 132 EETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRKT-ISSTGILDVQ-VLY 209 (979)
Q Consensus 132 ~~~dfi~l~L~~G~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~-~~~~~~l~~~-~ly 209 (979)
...|||+|+|++|+|+++|++|++...+. +...+|||+||+|+|.|.++.++|+||+....... ++....+++. +||
T Consensus 67 ~~~d~~~l~L~~G~l~~~~~~g~~~~~~~-~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~ 145 (383)
T 2jd4_A 67 NQMDYATLQLQEGRLHFMFDLGKGRTKVS-HPALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLY 145 (383)
T ss_dssp TSSSEEEEEEETTEEEEEEECSSCEEEEE-CCCCCTTSSCEEEEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEE
T ss_pred CCCcEEEEEEECCEEEEEEECCCCeEEEe-CcceecCCCcEEEEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeE
Confidence 14699999999999999999999866554 45799999999999999999999999998765544 3666677776 999
Q ss_pred EcCCCCcccc----------cccccCCCccCCCCCCCCccccCCCCeeeecCCCCCCCCcccccC-cccccCCCcceeeE
Q psy9685 210 LGGIPETVHH----------HRSIRSPYQPSRSYPSGGHCTDLWRDFSCSCVRPFLGHTCQYNFT-AATFGHENTTNSLV 278 (979)
Q Consensus 210 vGG~p~~~~~----------~~~~~~~~~~~~pc~~~G~C~~~~~~~~C~C~~~~~g~~C~~~~~-~~~f~~~~~~~~~~ 278 (979)
|||+|..... .++|++..... .=++.++...| +.+..|..... ...|.+. +++
T Consensus 146 vGG~p~~~~~~~~~~~~~~F~GCi~~l~in~-------~~l~l~~~~~~-----~~~~~C~~~~~~g~~F~g~----sy~ 209 (383)
T 2jd4_A 146 LGGLPSHYRARNIGTITHSIPACIGEIMVNG-------QQLDKDRPLSA-----SAVDRCYVVAQEGTFFEGS----GYA 209 (383)
T ss_dssp ESSCCTTCCCCSSCSCCSBCCEEEEEEEETT-------EECCTTSCSEE-----ESCBCCBSSEESSEEEEEE----EEE
T ss_pred EeccCcccccccccccCCCceEEeEEEEECC-------EEeccCCcccc-----CccccccCcCccCceECCC----eEE
Confidence 9999975321 11222221100 00111111110 11223433221 2344432 222
Q ss_pred EEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeee
Q psy9685 279 TVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNV 358 (979)
Q Consensus 279 ~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~ 358 (979)
.+... .......++|+|+|||++++|+|||.+.. ..||++|+|++|+|++++++|++...+..
T Consensus 210 ~~~~~---~~~~~~~~~isl~frT~~~~GlLl~~~~~--------------~~d~l~l~L~~G~l~~~~~~g~g~~~~~~ 272 (383)
T 2jd4_A 210 ALVKE---GYKVRLDLQITLEFRTTSKNGVLLGISSA--------------KVDAIGLEIVDGKVLFHVNNGAGRITATY 272 (383)
T ss_dssp EEEEE---EECCBSCEEEEEEEEESCSCEEEEEEECS--------------SSCEEEEEEETTEEEEEEESSSCEEEEEE
T ss_pred EEecC---ccccCCceEEEEEEEeCCCCEEEEEecCC--------------CCcEEEEEEECCEEEEEEECCCCcEEEEE
Confidence 22111 12245568999999999999999998653 56999999999999999999987654432
Q ss_pred ---cCeeecCCCeeEEEEEeecceeeeEE----------------------EEEccCCCc
Q psy9685 359 ---GGVKLADGNNHLIQTISSTGILDVQV----------------------LYLGGIPET 393 (979)
Q Consensus 359 ---~~~~l~DG~wH~V~~~~~~~~l~l~v----------------------lyvGG~p~~ 393 (979)
....|+||+||+|.+.+..+.+.|.| |||||+|+.
T Consensus 273 ~~~~~~~l~DG~WH~V~l~~~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~ 332 (383)
T 2jd4_A 273 QPRAARALCDGKWHTLQAHKSKHRIVLTVDGNSVRAESPHTHSTSADTNDPIYVGGYPAH 332 (383)
T ss_dssp CCSSTTGGGSSSCEEEEEEEETTEEEEEETTEEEEEC----CCCCBCCCEEEEESCCCTT
T ss_pred ecCCCccccCCCcEEEEEEEcCCEEEEEECCeecccccCCCCcccccCCCCEEEeccccc
Confidence 24679999999999999888776542 788888865
No 6
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=7.4e-36 Score=359.40 Aligned_cols=266 Identities=17% Similarity=0.214 Sum_probs=179.9
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+.+|+. ++++.++.. .......+|+|+|||.+++|||||+++. ...|||+|+|++|+|+
T Consensus 12 ~~~F~g----~~~~~y~p~----~~~~~~~~isl~FrT~~~~glLly~~~~-------------~~~dfl~l~L~~G~l~ 70 (608)
T 2wjs_A 12 SVSSGG----DCVRTYRPE----IKKGSYNNIVVHVKTAVADNLLFYLGSA-------------KFIDFLAIEMRKGKVS 70 (608)
T ss_dssp BCC--------CEEEECCC----CSCTTEEEEEEEEEESCSCEEEEEEECS-------------SCSCEEEEEEETTEEE
T ss_pred EEEcCC----CeEEEecCC----CCCcccceEEEEEecCCCceEEEEeCCC-------------CCCcEEEEEEECCEEE
Confidence 456754 578887751 2445788999999999999999999851 1579999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEe----------EEEecCccccccc---ceeEEcCCC
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEY----------FRKTISSTGILDV---QVLYLGGIP 214 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~----------~~~~~~~~~~l~~---~~lyvGG~p 214 (979)
|+|++|+++..+..+..++|||+||+|+|.|.++.++|+||+... ....++....|++ +.|||||+|
T Consensus 71 ~~~~~G~g~~~l~~~~~~~~dg~WH~V~v~r~~~~~~l~Vd~~~~~~~~~~~~~~~~~~~g~~~~L~l~~~~~l~vGG~p 150 (608)
T 2wjs_A 71 FLWDVGSGVGRVEYPDLTIDDSYWYRIEASRTGRNGSISVRALDGPKASMVPSTYHSVSPPGYTILDVDANAMLFVGGLT 150 (608)
T ss_dssp EEEESSSCEEEEECCSCCCTTSCCEEEEEEEETTEEEEEEEESSSTTTTSCCCCEEEECCSSCCSCCCCSSCEEEESSCC
T ss_pred EEEECCCCceEEeeCCccccCCceEEEEEEEeCCEEEEEEecccCccccccccccccccCCcceeeccCCCCcEEeCCcC
Confidence 999999987766655678999999999999999999999998642 2334566666665 379999999
Q ss_pred Ccccc---------cccccCCCccCCCCCCCCccccCCCCe--eeecCCCCCCCCcccccCcccccCCCcceeeEEEecC
Q psy9685 215 ETVHH---------HRSIRSPYQPSRSYPSGGHCTDLWRDF--SCSCVRPFLGHTCQYNFTAATFGHENTTNSLVTVAVG 283 (979)
Q Consensus 215 ~~~~~---------~~~~~~~~~~~~pc~~~G~C~~~~~~~--~C~C~~~~~g~~C~~~~~~~~f~~~~~~~~~~~~~~~ 283 (979)
..... .++|++.... +.=++.|+.- ...|..-..++.|+....+++|.+. +|+.++..
T Consensus 151 ~~~~~~~~~~~~~F~GCi~~l~in-------~~~i~l~~~~~~~g~~~gC~~~p~~~~~~~~~~F~g~----sy~~~~~~ 219 (608)
T 2wjs_A 151 GKIKKADAVRVITFTGCMGETYFD-------NKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQFDGE----GYALVSRP 219 (608)
T ss_dssp TTSCCCTTCCCCCCCEEECCCEES-------SSBC----CCEEESCCCCC--------CCCCEEEEEE----EEEEEECC
T ss_pred ccccCCcccccCCccEEEEEEEEC-------CEEccccccccccCCCCCCCCCcccccCCcceEECCC----cceEEecc
Confidence 75322 2223333321 1122233210 1112211123445543334566542 23333321
Q ss_pred cchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeee
Q psy9685 284 GVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKL 363 (979)
Q Consensus 284 ~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l 363 (979)
. ......++|+|+|||++++|||||.+... ..||++|+|++|+|++++++|++... +.+...|
T Consensus 220 ~---~~~~~~~~isl~FrT~~~~GlLl~~~~~~-------------~~d~l~L~L~~G~l~~~~~~g~~~~~-l~s~~~~ 282 (608)
T 2wjs_A 220 I---RWYPNISTVMFKFRTFSSSALLMYLATRD-------------LKDFMSVELSDGHVKVSYDLGSGMTS-VVSNQNH 282 (608)
T ss_dssp T---TCBTTEEEEEEEEEESCSEEEEEEEECTT-------------SSSEEEEEEETTEEEEEEECSSCEEE-EEEEEEC
T ss_pred c---cCCCcceEEEEEEEeCCCCeEEEEecCCC-------------CCceEEEEEECCEEEEEEECCCCcEE-EEcCccc
Confidence 1 11245688999999999999999996531 46999999999999999999988753 4456789
Q ss_pred cCCCeeEEEEEeecceeee
Q psy9685 364 ADGNNHLIQTISSTGILDV 382 (979)
Q Consensus 364 ~DG~wH~V~~~~~~~~l~l 382 (979)
+||+||+|.+.+..+.+.|
T Consensus 283 nDg~WH~V~v~r~~~~~~L 301 (608)
T 2wjs_A 283 NDGKWKAFTLSRIQKQANI 301 (608)
T ss_dssp CSSSCEEEEEEEETTEEEE
T ss_pred cCCceEEEEEEEecceEEE
Confidence 9999999999988765544
No 7
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=100.00 E-value=8e-33 Score=317.28 Aligned_cols=264 Identities=17% Similarity=0.217 Sum_probs=168.2
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+++|+. .+|+++++.... ...++|+|+|||.+++|||||+++. ...|||+|+|++|+|+
T Consensus 42 ~~~F~g----~~~~~~~f~~~~----~~~~~is~~FrT~~~~GlLly~~~~-------------~~~df~~l~L~~G~l~ 100 (422)
T 1h30_A 42 GRMFSG----TPVIRLRFKRLQ----PTRLVAEFDFRTFDPEGILLFAGGH-------------QDSTWIVLALRAGRLE 100 (422)
T ss_dssp CC---------CCEEEECCBSS----CCCCEEEEEEEECCSSEEEEEEESC-------------TTSEEEEEEEETTEEE
T ss_pred eeEECC----CceEEEEccCCC----CCceEEEEEEEeCCCCeEEEEECCC-------------CCCcEEEEEEECCEEE
Confidence 567766 566666652221 3778999999999999999998841 1469999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEE-ecCcccccc---cc-eeEEcCCCCcccc---
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRK-TISSTGILD---VQ-VLYLGGIPETVHH--- 219 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~-~~~~~~~l~---~~-~lyvGG~p~~~~~--- 219 (979)
|+|++|++.. +..+..++|||+||+|+|.|.++.++|+||+...... .++....++ +. +|||||+|.....
T Consensus 101 ~~~~~g~~~~-~~~~~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~~~~lyvGG~p~~~~~~~~ 179 (422)
T 1h30_A 101 LQLRYNGVGR-VTSSGPVINHGMWQTISVEELARNLVIKVNRDAVMKIAVAGDLFQPERGLYHLNLTVGGIPFHEKDLVQ 179 (422)
T ss_dssp EEEEETTEEE-EEEEEEECCSSCCEEEEEEECSSEEEEEETTEEEEEEECCSCSSEEETTEEECEEEESSCSSCGGGSSS
T ss_pred EEEECCCCcE-EEecCceecCCCCEEEEEEEcCCEEEEEECCeeeEEeecCCcccccccccccceEEEecCccccccccc
Confidence 9999998754 3445689999999999999999999999999876554 345555555 44 9999999976421
Q ss_pred ------cccccCCCccCCCCCCCCccccCCCCeeeecCCCCCCCCcccccCc-ccccCCCcceeeEEEecCcc--hh---
Q psy9685 220 ------HRSIRSPYQPSRSYPSGGHCTDLWRDFSCSCVRPFLGHTCQYNFTA-ATFGHENTTNSLVTVAVGGV--AR--- 287 (979)
Q Consensus 220 ------~~~~~~~~~~~~pc~~~G~C~~~~~~~~C~C~~~~~g~~C~~~~~~-~~f~~~~~~~~~~~~~~~~~--~~--- 287 (979)
.++|++..... +.=.+.+.. ........|...... ..|.+.+ ++.+..... +.
T Consensus 180 ~~~~~F~GCi~~v~i~~------~~~~~l~~~-----~~~~~~~~C~~~~~~g~~F~g~s----~~~~~~~~~~lp~~~~ 244 (422)
T 1h30_A 180 PINPRLDGCMRSWNWLN------GEDTTIQET-----VKVNTRMQCFSVTERGSFYPGSG----FAFYSLDYMRTPLDVG 244 (422)
T ss_dssp CCCCCCCEEEEEEEEC---------------C-----CCCCGGGSEESSCBSSEEECSSC----CEEECCCCBC------
T ss_pred ccCCCCeEEEEEeEECC------ccccchhhh-----hhcccCCCCCCcCCCCceECCCe----EEEEecCccccccccc
Confidence 11122211100 000000000 000112234333322 3444432 222222111 00
Q ss_pred ccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEE-------EEEEEcCCcCceeeecC
Q psy9685 288 RAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGEL-------FVRLQFNSTPESYNVGG 360 (979)
Q Consensus 288 ~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l-------~~~~~~g~~~~~~~~~~ 360 (979)
......++|+|+|||++++|||||.+... ...||++|+|++|++ ++.++.+.+.. +.. .
T Consensus 245 ~~~~~~~~is~~fRT~~~~GlLl~~~~~~------------~~~d~l~l~L~~G~le~~~~~~~l~~~~~~g~~-~~~-~ 310 (422)
T 1h30_A 245 TESTWEVEVVAHIRPAADTGVLFALWAPD------------LRAVPLSVALVDYHSTKKLKKQLVVLAVEHTAL-ALM-E 310 (422)
T ss_dssp --CCBCEEEEEEEEESSSCEEEEEEEEGG------------GTEEEEEEEEESCC-----CCCEEEEEETTEEE-EEE-E
T ss_pred cccccceEEEEEEecCCCCEEEEEecCCC------------cCCCcEEEEEEcCccccccccceEEEEeCCeeE-EEe-e
Confidence 01224679999999999999999986320 026999999999987 57777777652 333 4
Q ss_pred eeecCCCeeEE--EEEeecceeee
Q psy9685 361 VKLADGNNHLI--QTISSTGILDV 382 (979)
Q Consensus 361 ~~l~DG~wH~V--~~~~~~~~l~l 382 (979)
..|+||+||+| .+.+.++.|.|
T Consensus 311 ~~l~DG~WH~V~~~l~~~~~~L~v 334 (422)
T 1h30_A 311 IKVCDGQEHVVTVSLRDGEATLEV 334 (422)
T ss_dssp CCTTSSCCEEEEEEEETTEEEEEE
T ss_pred ecccCCCEeEeEEEEEEeccEEEE
Confidence 78999999999 87766655543
No 8
>2wjs_A Laminin subunit alpha-2; integrin, secreted, coiled coil, glycoprotein, laminin EGF-like domain, extracellular matrix, laminin G-like domain; HET: NAG; 2.80A {Mus musculus}
Probab=100.00 E-value=2.2e-31 Score=320.40 Aligned_cols=256 Identities=18% Similarity=0.244 Sum_probs=171.3
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+.+|.. +||+.++.+.. .....++|+|+|||.+++|||||+++. ...|||+|+|++|+|+
T Consensus 205 ~~~F~g----~sy~~~~~~~~---~~~~~~~isl~FrT~~~~GlLl~~~~~-------------~~~d~l~L~L~~G~l~ 264 (608)
T 2wjs_A 205 TIQFDG----EGYALVSRPIR---WYPNISTVMFKFRTFSSSALLMYLATR-------------DLKDFMSVELSDGHVK 264 (608)
T ss_dssp CEEEEE----EEEEEEECCTT---CBTTEEEEEEEEEESCSEEEEEEEECT-------------TSSSEEEEEEETTEEE
T ss_pred ceEECC----CcceEEecccc---CCCcceEEEEEEEeCCCCeEEEEecCC-------------CCCceEEEEEECCEEE
Confidence 355644 68888875221 123678999999999999999998741 1479999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEE------eEEEecCcccccc---cceeEEcCCCCccc
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTE------YFRKTISSTGILD---VQVLYLGGIPETVH 218 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~------~~~~~~~~~~~l~---~~~lyvGG~p~~~~ 218 (979)
|++++|++...+. +..++|||+||+|+|.|.++.++|+||+.. .....++....++ ...|||||+|....
T Consensus 265 ~~~~~g~~~~~l~-s~~~~nDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~g~~~~l~~~~~~~lylGG~p~~~~ 343 (608)
T 2wjs_A 265 VSYDLGSGMTSVV-SNQNHNDGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRN 343 (608)
T ss_dssp EEEECSSCEEEEE-EEEECCSSSCEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSSCCCCCCCTTCEEEESCCCCCSC
T ss_pred EEEECCCCcEEEE-cCccccCCceEEEEEEEecceEEEEEeccccccccccccccCCccccccccCCCceEEeccCcccc
Confidence 9999999865444 457899999999999999999999999732 2223344444555 24999999997642
Q ss_pred c---------cccccCCCccCCCCCCCCccccCCC-----CeeeecCCCCCCCCcccc-cCcccccCCCcceeeEEEecC
Q psy9685 219 H---------HRSIRSPYQPSRSYPSGGHCTDLWR-----DFSCSCVRPFLGHTCQYN-FTAATFGHENTTNSLVTVAVG 283 (979)
Q Consensus 219 ~---------~~~~~~~~~~~~pc~~~G~C~~~~~-----~~~C~C~~~~~g~~C~~~-~~~~~f~~~~~~~~~~~~~~~ 283 (979)
. .++|+++.... .=++... +.. +.|... ...++|... +++.++..
T Consensus 344 ~~~~~~~~~F~GCi~~v~in~-------~~~~l~~~~~~~~v~---------~gC~~~~~~~~~F~~~----g~~~~~~~ 403 (608)
T 2wjs_A 344 LRPEVNVKKYSGCLKDIEISR-------TPYNILSSPDYVGVT---------KGCSLENVYTVSFPKP----GFVELAAV 403 (608)
T ss_dssp CCTTCCCCCCEEEEEEEEETT-------EEECGGGCSSCEEEE---------ESCCCCCTTEEECSSS----CEEEECCC
T ss_pred cCcccccCCceEEeeeEEECC-------EecCccccccccccc---------cCCCcccccccccCCC----CeEEecCc
Confidence 1 11122111100 0000000 001 112221 223455542 23333321
Q ss_pred cchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCc---eeeecC
Q psy9685 284 GVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPE---SYNVGG 360 (979)
Q Consensus 284 ~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~---~~~~~~ 360 (979)
.....++|+|.|||++++|+|||.+.. ..+|++|+|++|+|+++++.|++.. .+..+.
T Consensus 404 -----~~~~~~~i~~~FRT~~~~GlLl~~~~~--------------~~~~l~l~L~~G~l~~~~~~g~~~~~~~~l~~~~ 464 (608)
T 2wjs_A 404 -----SIDVGTEINLSFSTRNESGIILLGSGG--------------GQAYYAIFLNKGRLEVHLSSGTRTMRKIVIKPEP 464 (608)
T ss_dssp -----CBCTTEEEEEEEEESCSSEEEEEEC-----------------CCEEEEEEETTEEEEEEEC----CEEEEECCCS
T ss_pred -----cCCCCcEEEEEEEeCCCCeEEEEEcCC--------------CCceEEEEEECCEEEEEEECCCCceeEEEEeCCC
Confidence 133467899999999999999999653 5699999999999999999987642 122346
Q ss_pred eeecCCCeeEEEEEeecceeeeE
Q psy9685 361 VKLADGNNHLIQTISSTGILDVQ 383 (979)
Q Consensus 361 ~~l~DG~wH~V~~~~~~~~l~l~ 383 (979)
..|+||+||+|.+.+.++.+.|.
T Consensus 465 ~~l~DG~WH~V~v~~~~~~~~L~ 487 (608)
T 2wjs_A 465 NRFHDGREHSVHVERTRGIFTVQ 487 (608)
T ss_dssp SCSSSSSCEEEEEEECSSEEEEE
T ss_pred cccCCCCeEEEEEEEeCCEEEEE
Confidence 78999999999999998877653
No 9
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.84 E-value=2.4e-20 Score=184.59 Aligned_cols=126 Identities=20% Similarity=0.253 Sum_probs=97.2
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+..|+. .+.+|+.|+.+.. .+++|+|+|||++++|||||+++. +..||++|+|++|+|+
T Consensus 7 ~~~F~g--~s~~~l~f~~~~~------~~~~is~~FrT~~~~GlLly~~~~-------------~~~df~~l~L~~G~l~ 65 (170)
T 1d2s_A 7 SNGPGQ--EPIAVMTFDLTKI------TKTSSSFEVRTWDPEGVIFYGDTN-------------PKDDWFMLGLRDGRPE 65 (170)
T ss_dssp CCTTCC--SCSEEEEEEGGGC------CCCEEEEEEEESCSSEEEEEEEEE-------------TTTEEEEEEEETTEEE
T ss_pred ccCCCC--CceEEEEecCCCC------CceEEEEEEEeCCCCEEEEEecCC-------------CCCCEEEEEEeCCEEE
Confidence 334655 3455566655222 456999999999999999998841 1469999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEEecCcccccccceeEEcCCCCcc
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRKTISSTGILDVQVLYLGGIPETV 217 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~l~~~~lyvGG~p~~~ 217 (979)
++|+.|++... ..+..++|||+||+|+|.|.++.++|+||+.......... .++..+|||||+|...
T Consensus 66 ~~~~~g~~~~~-~~s~~~vnDG~WH~V~v~~~~~~~~L~VD~~~~~~~~~~~--~l~~~~lylGG~p~~~ 132 (170)
T 1d2s_A 66 IQLHNHWAQLT-VGAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVS--GHPIMRIALGGLLFPA 132 (170)
T ss_dssp EEEESSSCEEE-EECSCCCCSSSCEEEEEEEETTEEEEEETTEEEEEETTCC--CCCEEEEEESSCSSCG
T ss_pred EEEECCCceEE-EeCCCccCCCCCEEEEEEEeCCEEEEEECCeeeeeeccCC--CcccccEEEECcccch
Confidence 99999987443 3456899999999999999999999999998765543221 2444699999999754
No 10
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.83 E-value=3.4e-20 Score=190.00 Aligned_cols=137 Identities=18% Similarity=0.259 Sum_probs=101.4
Q ss_pred EeeeccCccccccccccCCC--eeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCE
Q psy9685 59 TFVTSPDFTAATFGHENTTN--SLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSY 136 (979)
Q Consensus 59 ~~~~~~~~~a~~Fg~~~~~~--s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~df 136 (979)
.+...++ +.+|+...+.. +|+.++.+.. .+++|+|+|||++++|||||+++. ...||
T Consensus 8 ~~~~~~~--~~~F~~~~~~~~~~y~~~~~~~~------~~~~is~~frT~~~~GlLly~~~~-------------~~~d~ 66 (205)
T 1f5f_A 8 QSAHDPP--AVHLSNGPGQEPIAVMTFDLTKI------TKTSSSFEVRTWDPEGVIFYGDTN-------------PKDDW 66 (205)
T ss_dssp -----CC--CEESCCTTCCSCSEEEEEEGGGC------CCCEEEEEEEESCSSEEEEEEEEE-------------TTTEE
T ss_pred ccccCCc--cEEeccCCCCcEeEEEEECCCCC------CceEEEEEEEeCCCCEEEEEeCCC-------------CCCCE
Confidence 3444555 78998754444 5666665221 347999999999999999998841 13599
Q ss_pred EEEEEeCcEEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEEec--Cc--ccccccceeEEcC
Q psy9685 137 IAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRKTI--SS--TGILDVQVLYLGG 212 (979)
Q Consensus 137 i~l~L~~G~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~--~~--~~~l~~~~lyvGG 212 (979)
|+|+|++|+|+++|++|+++..+ .+..++|||+||+|+|.|+++.++|+||+........ .. ...+...+|||||
T Consensus 67 ~~l~L~~G~l~~~~~~g~~~~~~-~s~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~~~~~~~~lyiGG 145 (205)
T 1f5f_A 67 FMLGLRDGRPEIQLHNHWAQLTV-GAGPRLDDGRWHQVEVKMEGDSVLLEVDGEEVLRLRQVSGPLTSKRHPIMRIALGG 145 (205)
T ss_dssp EEEEEETTEEEEEEESSSCEEEE-ECSCCCCSSSCEEEEEEEETTEEEEEETTEEEEEECSCCCCC----CCEEEEEESS
T ss_pred EEEEEECCEEEEEEECCCceEEE-ecCCccCCCCCEEEEEEEeCCEEEEEECCeeeeeeeccCCCcccccCCCceEEEeC
Confidence 99999999999999999875433 4568999999999999999999999999987655432 11 1334446999999
Q ss_pred CCCcc
Q psy9685 213 IPETV 217 (979)
Q Consensus 213 ~p~~~ 217 (979)
+|...
T Consensus 146 ~p~~~ 150 (205)
T 1f5f_A 146 LLFPA 150 (205)
T ss_dssp CSSCG
T ss_pred ccCcc
Confidence 99754
No 11
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.83 E-value=4.9e-20 Score=186.18 Aligned_cols=134 Identities=16% Similarity=0.217 Sum_probs=104.7
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
.++|.. +||+.++.+......++..++|+|+|||++++|||||+++ ......|||+|+|.+|+|+
T Consensus 11 ~~~F~g----~syl~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~-----------~~~~~~d~l~l~L~~G~l~ 75 (189)
T 3pve_A 11 LADFNG----FSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLLYNGQ-----------KTDGKGDFVSLALHNRHLE 75 (189)
T ss_dssp CEEEES----SCEEEECCGGGC-------CEEEEEEEESSSCEEEEEEES-----------CC-CCSCEEEEEEETTEEE
T ss_pred eeEECC----CceEEEcCcccccccccceEEEEEEEEeCCCCEEEEEecC-----------CCCCCCCeEEEEEECCEEE
Confidence 556765 7999999854432234568899999999999999999884 1112579999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeE-EEecCcccccccc-eeEEcCCCCcc
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYF-RKTISSTGILDVQ-VLYLGGIPETV 217 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~-~~~~~~~~~l~~~-~lyvGG~p~~~ 217 (979)
++|++|+++..+. +..++|||+||+|.+.|+++.++|+||+.... ...++....+++. +|||||+|...
T Consensus 76 ~~~~~G~g~~~l~-s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~~ 146 (189)
T 3pve_A 76 FRYDLGKGAAIIR-SKEPIALGTWVRVFLERNGRKGALQVGDGPRVLGESPVPHTMLNLKEPLYVGGAPDFS 146 (189)
T ss_dssp EEEESSSCEEEEE-CSSCCCTTSEEEEEEEEETTEEEEEETTSCCEEEECCSSCCCCCCCSCEEESCCSCGG
T ss_pred EEEecCCCCEEEE-cCcccCCCCEEEEEEEEeCCEEEEEECCceeEeEEcCCCcceecCCCCEEECCcCchh
Confidence 9999999855444 56899999999999999999999999997543 3445666777777 89999999764
No 12
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.83 E-value=5.2e-20 Score=183.95 Aligned_cols=134 Identities=13% Similarity=0.207 Sum_probs=104.3
Q ss_pred cccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEE
Q psy9685 67 TAATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGEL 146 (979)
Q Consensus 67 ~a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l 146 (979)
++.+|+. .+||+.+...... .......+|+|+|||++++|||||..+ .....||++|+|++|+|
T Consensus 5 t~~~F~~---~~s~l~y~~~~~~-~~~~~~~~isl~FrT~~~~GlLl~~~~------------~~~~~dfi~l~L~~G~l 68 (178)
T 3bod_A 5 STYIFSK---GGGQITYKWPPND-RPSTRADRLAIGFSTVQKEAVLVRVDS------------SSGLGDYLELHIHQGKI 68 (178)
T ss_dssp CEEEEEE---EEEEEEEECCTTS-CCCBSEEEEEEEEECCCSSEEEEEEEE------------SSSSCCEEEEEEETTEE
T ss_pred eEEEECC---CCcEEEEECCCcC-CCCccccEEEEEEEECCCCEEEEEEcC------------CCCCCCEEEEEEECCEE
Confidence 3677865 3589988763311 112356799999999999999999642 11257999999999999
Q ss_pred EEEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEEe-cCc-ccccccc-eeEEcCCCCc
Q psy9685 147 FVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRKT-ISS-TGILDVQ-VLYLGGIPET 216 (979)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~-~~~-~~~l~~~-~lyvGG~p~~ 216 (979)
+++|++|++...+..+..++|||+||+|+|.|.++.++|+||+....... ++. ...++.. +|||||+|..
T Consensus 69 ~~~~~~G~~~~~~~~~~~~vnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~ 141 (178)
T 3bod_A 69 GVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG 141 (178)
T ss_dssp EEEEESSSCCEEEECCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCCSCCCCCBCCEEEEEESCCTTS
T ss_pred EEEEECCCCceEEecCCcCccCCCeEEEEEEEeCCEEEEEEeCCceeeeecCCCcceEEeCCCcEEEecccCC
Confidence 99999999876666566789999999999999999999999997654443 232 3557777 9999999973
No 13
>1dyk_A Laminin alpha 2 chain; metal binding protein; 2.0A {Mus musculus} SCOP: b.29.1.4 b.29.1.4 PDB: 1okq_A 1qu0_A
Probab=99.83 E-value=2.6e-19 Score=203.42 Aligned_cols=122 Identities=22% Similarity=0.384 Sum_probs=91.0
Q ss_pred CCCCCCCccccc------CcccccCCCcceeeEEEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCC
Q psy9685 252 RPFLGHTCQYNF------TAATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNG 325 (979)
Q Consensus 252 ~~~~g~~C~~~~------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~ 325 (979)
++|.++ |..+. .+.+|++... +++.++.... .....++|+|+|||.+++|||||.+..
T Consensus 17 ~~~~~~-C~~~~~~~~~~~a~~Fg~~~~--s~~~~~~~~~---~~~~~~~is~~frT~~~~GlLly~~~~---------- 80 (394)
T 1dyk_A 17 TMVHGP-CVAESEPALLTGSKQFGLSRN--SHIAIAFDDT---KVKNRLTIELEVRTEAESGLLFYMARI---------- 80 (394)
T ss_dssp ---CCS-SCCCCCCCBCTTCEECCSSTT--CEEEEECCGG---GGSSEEEEEEEEEECCSCEEEEEEECT----------
T ss_pred CCCCCc-cCCCccccccccceecCCCCC--cEEEEEcCcc---ccccceEEEEEEEeCCCCeEEEEcCCC----------
Confidence 355665 76665 5567887543 3344443221 245678999999999999999999753
Q ss_pred CCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeEEEEEeecceeeeE---------------------E
Q psy9685 326 AGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQTISSTGILDVQ---------------------V 384 (979)
Q Consensus 326 ~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V~~~~~~~~l~l~---------------------v 384 (979)
+..|||+|+|.+|+|++++++|++...+ .....|+||+||+|.+.+..+.+.|. .
T Consensus 81 ---~~~dfi~l~L~~G~l~~~~~~g~g~~~~-~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~g~~~~l~~~~~ 156 (394)
T 1dyk_A 81 ---NHADFATVQLRNGFPYFSYDLGSGDTST-MIPTKINDGQWHKIKIVRVKQEGILYVDDASSQTISPKKADILDVVGI 156 (394)
T ss_dssp ---TSSSEEEEEEETTEEEEEEESSSCEEEE-ECCSCCCSSSCEEEEEEEETTEEEEEETTEEEEEECSTTCCCCCCCSE
T ss_pred ---CCCceEEEEEECCEEEEEEECCCCceEE-EcccccCCCCEEEEEEEEeCCEEEEEEcCcccceecCCCCceecCCCC
Confidence 1469999999999999999999987644 45678999999999999988777553 3
Q ss_pred EEEccCCCc
Q psy9685 385 LYLGGIPET 393 (979)
Q Consensus 385 lyvGG~p~~ 393 (979)
|||||+|..
T Consensus 157 l~vGG~p~~ 165 (394)
T 1dyk_A 157 LYVGGLPIN 165 (394)
T ss_dssp EEESSCCTT
T ss_pred EEEcccCCc
Confidence 888888865
No 14
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.83 E-value=1e-19 Score=182.50 Aligned_cols=128 Identities=16% Similarity=0.281 Sum_probs=103.3
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+++|.. +||+.+..+ .......++|+|+|||.+++|||||.++. ...|||+|+|.+|+|+
T Consensus 7 ~~~F~G----~sy~~~~~~---~~~~~~~~~isl~FrT~~~~GlLl~~~~~-------------~~~d~l~L~L~~G~l~ 66 (182)
T 2r16_A 7 VLSYDG----SMFMKIQLP---VVMHTEAEDVSLRFRSQRAYGILMATTSR-------------DSADTLRLELDAGRVK 66 (182)
T ss_dssp EEEEES----SCCEEEEEE---EEEEESEEEEEEEEECSCSSEEEEEEECS-------------SSCCEEEEEEETTEEE
T ss_pred cEEECC----CceEEEECC---CcCCccceEEEEEEEECCCCEEEEEeCCC-------------CCCCEEEEEEECCEEE
Confidence 556644 688887652 11234788999999999999999998841 2579999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEE-ecCcccccccceeEEcCCCCc
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRK-TISSTGILDVQVLYLGGIPET 216 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~-~~~~~~~l~~~~lyvGG~p~~ 216 (979)
++|++|+++..+. +...+|||+||+|+|.|.++.++|+||+...... .++....++++++||||+|..
T Consensus 67 ~~~~~G~~~~~~~-~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~l~iGG~~~~ 135 (182)
T 2r16_A 67 LTVNLGKGPETLF-AGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITER 135 (182)
T ss_dssp EEEESSSCCEEEE-ECSSCCSSSCEEEEEEEETTEEEEEETTCCEEEEECCSSCCCEEEEEEEESSCCCC
T ss_pred EEEECCCCceEEE-cCcccCCCCeEEEEEEEECCEEEEEECCceeEeEECCCCccEEeccCeEECCcccc
Confidence 9999999865554 5689999999999999999999999999866443 356666677778999999875
No 15
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.82 E-value=1.2e-19 Score=183.52 Aligned_cols=133 Identities=17% Similarity=0.271 Sum_probs=106.6
Q ss_pred ccccccccCCCeeEEEEeCccc--------cccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVA--------RRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAA 139 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~--------~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l 139 (979)
+.+|.. +||+.++..... +...+..++|+|+|||++++|||||+++ .....|||+|
T Consensus 4 ~~~F~G----~sy~~y~~~~~~~~~~~~~~~~~~~~~~~isl~frT~~~~GlLl~~~~------------~~~~~d~l~l 67 (191)
T 3v64_A 4 TLAFDG----RTYIEYLNAVIESELTNEIPAEKALQSNHFELSLRTEATQGLVLWIGK------------AAERADYMAL 67 (191)
T ss_dssp EEEEES----SCCEEEECSCCCHHHHCCCCCCEEESEEEEEEEEECSCSSEEEEEESC------------CSTTCCEEEE
T ss_pred cceecC----ceeEEEccccccccccccccccccccceEEEEEEEeCCCCeEEEEeCC------------CCCCCcEEEE
Confidence 556654 899999874322 1234578999999999999999999874 1125799999
Q ss_pred EEeCcEEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEE-EecCcccccccc-eeEEcCCCCcc
Q psy9685 140 EMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFR-KTISSTGILDVQ-VLYLGGIPETV 217 (979)
Q Consensus 140 ~L~~G~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~-~~~~~~~~l~~~-~lyvGG~p~~~ 217 (979)
+|.+|+|+++|++|+++..+.+ ..++|||+||+|.+.|+++.++|+||+..... ..++....++.. +|||||+|...
T Consensus 68 ~L~~G~l~~~~~~G~~~~~l~s-~~~v~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~~ 146 (191)
T 3v64_A 68 AIVDGHLQLSYDLGSQPVVLRS-TVKVNTNRWLRIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLP 146 (191)
T ss_dssp EEETTEEEEEEESSSCCEEEEE-EEECTTSSCEEEEEEEETTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCSSCC
T ss_pred EEECCEEEEEEECCCccEEEec-CccccCCCCEEEEEEEeCCEEEEEECCeeeEeEECCCCcceeccCCceEEcccCccc
Confidence 9999999999999998765554 47899999999999999999999999975433 345666677777 99999999864
No 16
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.82 E-value=1.3e-19 Score=183.97 Aligned_cols=136 Identities=18% Similarity=0.330 Sum_probs=105.8
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+++|.. +||++++.+...+......++|+|+|||++++|||||.+... .......|||+|+|.+|+|+
T Consensus 7 ~~~F~G----~syl~lp~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~--------~~~~~~~d~l~l~L~~G~l~ 74 (195)
T 3sh4_A 7 GAYFHD----DGFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEV--------GEAGQGKDFISLGLQDGHLV 74 (195)
T ss_dssp EEEEEE----EEEEEECGGGGCCCSTTCCEEEEEEEEECCSSEEEEEECCCT--------TCTTSTTCEEEEEEETTEEE
T ss_pred cCEECC----CEEEEEccccccccccccceEEEEEEEeCCCCcEEEEecccc--------cCCCCCCcEEEEEEeCCEEE
Confidence 566754 799999985332212234689999999999999999987310 01123579999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEE-ecCcccccccc-eeEEcCCCCc
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRK-TISSTGILDVQ-VLYLGGIPET 216 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~-~~~~~~~l~~~-~lyvGG~p~~ 216 (979)
|+|++|++...+. +..+||||+||+|.|.|+++.++|+||+...... .++....++.. +|||||+|..
T Consensus 75 ~~~~~G~g~~~~~-s~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lyvGG~p~~ 144 (195)
T 3sh4_A 75 FRYQLGSGEARLV-SEDPINDGEWHRVTALREGRRGSIQVDGEELVSGRSPGPNVAVNAKGSVYIGGAPDV 144 (195)
T ss_dssp EEEECSSCEEEEE-EEEECCSSSCEEEEEEEETTEEEEEETTCCCEEEECCSSCCCCCCCSCEEESCCTTH
T ss_pred EEEECCCCcEEEE-cCceeCCCCeEEEEEEEeCCEEEEEECCeeeeeeeCCCCcccccCCCCEEECCCCCc
Confidence 9999999865444 5589999999999999999999999999865443 45556667776 9999999975
No 17
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.82 E-value=2e-19 Score=184.26 Aligned_cols=133 Identities=18% Similarity=0.247 Sum_probs=104.7
Q ss_pred ccccccccCCCeeEEEEeCccc-----------cccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVA-----------RRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSY 136 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~-----------~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~df 136 (979)
+.+|.. +||+.++..... ++.....++|+|+|||.+++|||||+++ .....||
T Consensus 14 ~~~F~G----~sy~~~~~~~~~~~~~l~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~------------~~~~~df 77 (204)
T 1pz7_A 14 AIAFDG----RTYMEYHNAVTKSPDALDYPAEPSEKALQSNHFELSIKTEATQGLILWSGK------------GLERSDY 77 (204)
T ss_dssp CEEEES----SCCEEEECCSCCC-------CCSSCEEESEEEEEEEEEECCSSEEEEEESC------------CSTTCCE
T ss_pred ceeECC----ceeEEEcCcccccccccccccccccccceeEEEEEEEEcCCCCeEEEEeCC------------CCCCCCe
Confidence 556643 799998853210 1133468899999999999999999873 1125799
Q ss_pred EEEEEeCcEEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEE-EecCcccccccc-eeEEcCCC
Q psy9685 137 IAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFR-KTISSTGILDVQ-VLYLGGIP 214 (979)
Q Consensus 137 i~l~L~~G~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~-~~~~~~~~l~~~-~lyvGG~p 214 (979)
|+|+|.+|+|+|+|++|+++..+. +..+||||+||+|+|.|+++.++|+||+..... ..++....++.. +|||||+|
T Consensus 78 l~l~L~~G~l~~~~~~G~g~~~v~-s~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p 156 (204)
T 1pz7_A 78 IALAIVDGFVQMMYDLGSKPVVLR-STVPINTNHWTHIKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGME 156 (204)
T ss_dssp EEEEEETTEEEEEEESSSCCEEEE-EEEECCSSSCEEEEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCS
T ss_pred EEEEEECCEEEEEEECCCCeEEEE-CCcccCCCCeEEEEEEEeCCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCC
Confidence 999999999999999999866554 457999999999999999999999999975433 345556667776 99999999
Q ss_pred Ccc
Q psy9685 215 ETV 217 (979)
Q Consensus 215 ~~~ 217 (979)
...
T Consensus 157 ~~~ 159 (204)
T 1pz7_A 157 RLS 159 (204)
T ss_dssp CCS
T ss_pred Ccc
Confidence 764
No 18
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.81 E-value=1.8e-19 Score=186.24 Aligned_cols=133 Identities=13% Similarity=0.198 Sum_probs=103.2
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
++.|++ .. |++.+....... ......+|+|+|||++++|||||.++ .....|||+|+|++|+|+
T Consensus 40 ~y~f~~--~g-s~i~y~~~~~~~-~~~~~~~isl~FrT~~~~GlLl~~~~------------~~~~~dfi~L~L~~G~l~ 103 (226)
T 2r1d_A 40 TYIFSK--GG-GQITYKWPPNDR-PSTRADRLAIGFSTVQKEAVLVRVDS------------SSGLGDYLELHIHQGKIG 103 (226)
T ss_dssp EEEEEE--EE-EEEEEECCGGGC-CCBSEEEEEEEEECCCSSEEEEEEEE------------CTTCCCEEEEEEETTEEE
T ss_pred EEEEec--CC-cEEEEECCcccc-ccccccEEEEEEEeCCCCEEEEEecC------------CCCCCCEEEEEEECCEEE
Confidence 346777 34 888887633111 11245689999999999999999752 112569999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEE--ecCcccccccc-eeEEcCCCCc
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRK--TISSTGILDVQ-VLYLGGIPET 216 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~--~~~~~~~l~~~-~lyvGG~p~~ 216 (979)
|+|++|++...+.....++|||+||+|+|.|.++.++|+||+...... ..+....++.+ +|||||+|..
T Consensus 104 ~~~~~G~~~~~~~~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~~l~~~~~lylGG~p~~ 175 (226)
T 2r1d_A 104 VKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGGKEQG 175 (226)
T ss_dssp EEEESSSCEEEEECCSSCCCSSSCEEEEEEEETTEEEEEETTSCCEEECCSSCCCCCBCSEEEEEESSTTTT
T ss_pred EEEECCCCcEEEEeCCeEecCCCCEEEEEEEeCCEEEEEEcCccceEEecCCCcceeccCCCeEEEccccCC
Confidence 999999986666656678999999999999999999999999754333 23455667776 9999999963
No 19
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.81 E-value=1.6e-19 Score=186.33 Aligned_cols=111 Identities=12% Similarity=0.174 Sum_probs=87.3
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+++|+. ..||+.+...... .......+|+|+|||++++|||||.+. .....|||+|+|++|+|+
T Consensus 12 ~~~F~~---g~s~l~y~~~~~~-~~~~~~~~isl~FrT~~~~GlLly~~~------------~~~~~dfi~LeL~~G~l~ 75 (220)
T 2r1b_A 12 TYIFSK---GGGQITYKWPPND-RPSTRADRLAIGFSTVQKEAVLVRVDS------------SSGLGDYLELHIHQGKIG 75 (220)
T ss_dssp EEEEEE---EEEEEEEECCGGG-CCCBSEEEEEEEEECCCSSEEEEEEEE------------STTCCCEEEEEEETTEEE
T ss_pred eEEECC---CCeEEEEECCCCC-cccccCcEEEEEEEeCCCCEEEEEecC------------CCCCCCeEEEEEECCEEE
Confidence 567764 3588888763211 112245589999999999999999652 112569999999999999
Q ss_pred EEEEeCCcceEEeecCeeecCCCcEEEEEEEEceEEEEEECCEEeEE
Q psy9685 148 VRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFR 194 (979)
Q Consensus 148 ~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~ 194 (979)
|+|++|++...+.....++|||+||+|+|.|.++.++|+||+.....
T Consensus 76 ~~~~~G~~~~~~~~~~~~vnDG~WH~V~v~r~~~~~~L~VD~~~~~~ 122 (220)
T 2r1b_A 76 VKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIE 122 (220)
T ss_dssp EEEESSSSCEEEECTTCCCCSSSCEEEEEEEETTEEEEEETTSCCEE
T ss_pred EEEECCCCceEEEeCceEecCCceEEEEEEEeCCEEEEEECCcceee
Confidence 99999998776666557899999999999999999999999985443
No 20
>2jd4_A Laminin subunit alpha-1; basement membrane protein, metal binding protein; 1.9A {Mus musculus}
Probab=99.80 E-value=1.6e-18 Score=196.34 Aligned_cols=111 Identities=25% Similarity=0.410 Sum_probs=86.1
Q ss_pred CcccccCCCcceeeEEEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEE
Q psy9685 264 TAATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGEL 343 (979)
Q Consensus 264 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l 343 (979)
.+++|++.. .+++.++.... .....++|+|+|||.+++|||||.+.. +..||++|+|.+|+|
T Consensus 20 ~a~~Fg~~~--~S~~~~~~~~~---~~~~~~~is~~frT~~~~GlLly~~~~-------------~~~d~~~l~L~~G~l 81 (383)
T 2jd4_A 20 GAHQFGLSQ--NSHLVLPLQQS---DVRKRLQVQLSIRTFASSGLIYYVAHQ-------------NQMDYATLQLQEGRL 81 (383)
T ss_dssp TCEECCSST--TCEEEEECCSC---CCSSEEEEEEEEEECCSCEEEEEEECT-------------TSSSEEEEEEETTEE
T ss_pred cccccCCCC--CeeEEEeCCch---hcccceEEEEEEEcCCCCeEEEEeCCC-------------CCCcEEEEEEECCEE
Confidence 456788743 34455443211 145578999999999999999999653 146999999999999
Q ss_pred EEEEEcCCcCceeeecCeeecCCCeeEEEEEeecceeeeEE----------------------EEEccCCCc
Q psy9685 344 FVRLQFNSTPESYNVGGVKLADGNNHLIQTISSTGILDVQV----------------------LYLGGIPET 393 (979)
Q Consensus 344 ~~~~~~g~~~~~~~~~~~~l~DG~wH~V~~~~~~~~l~l~v----------------------lyvGG~p~~ 393 (979)
++++++|++...+ .+...|+||+||+|.+.+..+.+.|.+ |||||+|..
T Consensus 82 ~~~~~~g~~~~~~-~~~~~~~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~g~~~~l~~~~~l~vGG~p~~ 152 (383)
T 2jd4_A 82 HFMFDLGKGRTKV-SHPALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGKATTLDVERKLYLGGLPSH 152 (383)
T ss_dssp EEEEECSSCEEEE-ECCCCCTTSSCEEEEEEEETTEEEEEETTEECCCEECCSSCCCCCCCSEEEESSCCTT
T ss_pred EEEEECCCCeEEE-eCcceecCCCcEEEEEEEeCCEEEEEEcCccccceecCCCcceecCCCCeEEeccCcc
Confidence 9999999987654 456789999999999999888776643 888888865
No 21
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.80 E-value=8.8e-19 Score=176.54 Aligned_cols=129 Identities=20% Similarity=0.279 Sum_probs=102.5
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELF 147 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~ 147 (979)
+++|.. +||+.++..... .....++|+|+|||++++|||||.++ ..||++|+|.+|+|+
T Consensus 7 ~~~F~G----~sy~~~~~~~~~--~~~~~~~isl~frT~~~~GlLl~~g~---------------~~d~l~l~L~~G~l~ 65 (184)
T 2h0b_A 7 IATFKG----SEYFCYDLSQNP--IQSSSDEITLSFKTLQRNGLMLHTGK---------------SADYVNLALKNGAVS 65 (184)
T ss_dssp EEEEES----SEEEEEECSSSC--EEESEEEEEEEEEESCSCEEEEEECC---------------TTEEEEEEEETTEEE
T ss_pred eeEECC----ceEEEEccccCc--cccCccEEEEEEEeCCCCEEEEEeCC---------------CCCEEEEEEECCEEE
Confidence 456744 799999874211 12357899999999999999999864 579999999999999
Q ss_pred EEEEeCCcceEEe--ecCeeecCCCcEEEEEEEEceEEEEEECCEEeEEE-ecCcccccccc-eeEEcCCCCcc
Q psy9685 148 VRLQFNSTPESYN--VGGVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRK-TISSTGILDVQ-VLYLGGIPETV 217 (979)
Q Consensus 148 ~~~~~g~~~~~~~--~~~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~-~~~~~~~l~~~-~lyvGG~p~~~ 217 (979)
+++++|+++.... .+..++|||+||+|+|.|+++.++|+||+...... .++....++.. +|||||+|...
T Consensus 66 ~~~~~G~g~~~~~~~~~~~~l~Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~l~lGG~p~~~ 139 (184)
T 2h0b_A 66 LVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTA 139 (184)
T ss_dssp EEEEESSCEEEEEECCSSSCSSSSSCEEEEEEEETTEEEEEETTTEEEEEECSTTCCCEEECSEEEESCCTTGG
T ss_pred EEEECCCCeEEEEEecCCcccCCCCeEEEEEEEeCCEEEEEEcCceeeeeECCCCceeccCCCCEEECCCCccc
Confidence 9999999854322 35679999999999999999999999999765443 33445556665 89999999864
No 22
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.79 E-value=1e-23 Score=216.79 Aligned_cols=243 Identities=13% Similarity=0.110 Sum_probs=173.5
Q ss_pred CCCCCceEECCCC---ccCCCCCCCCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCcccccccc------CCCCCCCC
Q psy9685 580 DPLTSYACKCPAG---YSSETCAVDIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEIDE------CLSNPCMN 650 (979)
Q Consensus 580 ~~~~~~~C~C~~G---~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~------C~~~~C~~ 650 (979)
+.++.+.|.|.+| +.|..+...+..+. .+|.++++|++..++|.|.|+.||+|..|+..+++ |...||.+
T Consensus 8 n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~-~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~n 86 (267)
T 4fbr_A 8 NQWGGSQATWNPGGLWLIGARDKQNVVALD-IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQP 86 (267)
T ss_dssp EECSSTTSCCEEEEEEECCCCSSCCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEE
T ss_pred ecCCcccCCcCCCCceeeccccccccccCC-CCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccC
Confidence 5678888888888 56777776555554 37899999999999999999999999999999988 66666766
Q ss_pred CCEEeeCCCCcEEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCCC-
Q psy9685 651 GGQCEDRLAGFVCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECASG- 729 (979)
Q Consensus 651 ~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~- 729 (979)
+++| |.|..|+..+ .|.+.||.++++|.+. ..+|+|.|++||+|..|+.++++|...
T Consensus 87 ggtc--------------~~G~~c~~~~--eC~s~pC~ngG~C~~~------~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~ 144 (267)
T 4fbr_A 87 GGVW--------------VLGARDKQNI--VAVSIKSNDGGKTLTG------TTTYNGEGPIGFKSEVTDGDTYSVENQW 144 (267)
T ss_dssp EEEE--------------ECCCCSSCCE--EEEEEECSSTTSEEEE------EEEETTSCCEEEEEEECCCCEEEEEEEC
T ss_pred CCee--------------eccCcccccc--ccCCCCCCCCCEEecC------CccEEeeCCCCccccCCCCCcccccccC
Confidence 6655 3467777643 6888999999999987 567999999999999999999985544
Q ss_pred -----CCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCC
Q psy9685 730 -----PCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADS 804 (979)
Q Consensus 730 -----~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~ 804 (979)
||.+.++|+.....+++.+ |..... ..+..+.+-
T Consensus 145 ~c~s~pC~ngg~c~~G~~c~~~i~----------------------------------------c~~~~c-~ngg~C~dg 183 (267)
T 4fbr_A 145 GGSAAPWHSGGVWVLGTRGKQNVI----------------------------------------NVDAKS-NDGGKTLSG 183 (267)
T ss_dssp SSTTSCCEEEEEEECCSSTTSCEE----------------------------------------EEEEEC-SSTTSEEEE
T ss_pred CcCCccccCCcceecccccccccc----------------------------------------cCCCCC-CCCCEeeCC
Confidence 4444444433211111100 111111 112223334
Q ss_pred CCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCC
Q psy9685 805 GPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCNFPDPCKDEPCQNGGTCHEDCRH 884 (979)
Q Consensus 805 ~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~C~~~c~~ 884 (979)
...|.|.|++||+|..|+.++++|+. ...| ....|.+ .|.+.|-|..++.+..|+ .+|.++|+|. +.
T Consensus 184 ~~~y~C~Cp~Gf~G~~c~~~i~ec~~-~~~c-~~~~c~~-gG~~~~~C~~g~n~~~c~-------~~c~ngGtC~---dg 250 (267)
T 4fbr_A 184 TMTYNGEGPIGFRGTLTSPDTYTVEN-QWGG-STAPWNP-GGFWMIGARNGQNVVALN-------VASSDGGKTL---AG 250 (267)
T ss_dssp EEEETTSCCEEEEEEEEETTEEEEEE-ECSC-TTSCCEE-EEEEECCCCTTCCEEEEE-------EECSSTTSEE---EE
T ss_pred CCCeEEeCCCCccccccccccceecc-CCCc-cCCcccC-CCeEEEecCCCCccccCC-------cCCCCCCEee---CC
Confidence 56789999999999999999998853 1222 2233433 355677788887766664 2688999999 45
Q ss_pred CCCeEeecCCCCCCC
Q psy9685 885 QADYKCDCLPGWTGK 899 (979)
Q Consensus 885 ~~~~~C~C~~G~~G~ 899 (979)
..+|.|.|++||+|+
T Consensus 251 ~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 251 TMIYNGEGPIGFRAR 265 (267)
T ss_dssp EEEETTSCCEEEEEE
T ss_pred CcceeecCCCCcccc
Confidence 678999999999875
No 23
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=99.78 E-value=3.1e-18 Score=195.56 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=64.5
Q ss_pred cceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceee-ecCeeecCCCee
Q psy9685 291 RNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYN-VGGVKLADGNNH 369 (979)
Q Consensus 291 ~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~-~~~~~l~DG~wH 369 (979)
...++|+|+|||++++|||||.+.. ..||++|+|.+|+|++++++|+++..+. .+...|+||+||
T Consensus 25 ~~~~~is~~frT~~~~GlLly~~~~--------------~~dfi~l~L~~G~l~~~~~~G~g~~~~~~~s~~~vnDg~WH 90 (410)
T 3asi_A 25 YTSMHLFFQFKTTSLDGLILYNSGD--------------GNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWH 90 (410)
T ss_dssp SSCEEEEEEEECSCSCEEEEEEEBS--------------TTCEEEEEEETTEEEEEEESSSCEEEEECCCSSCSCSSSCE
T ss_pred CceEEEEEEEEeCCCCeEEEEeCCC--------------CCCEEEEEEECCEEEEEEECCCCcEEEEeccCcEeCCCCeE
Confidence 3468999999999999999998653 5699999999999999999999876554 367899999999
Q ss_pred EEEEEeecc
Q psy9685 370 LIQTISSTG 378 (979)
Q Consensus 370 ~V~~~~~~~ 378 (979)
+|.+.+..+
T Consensus 91 ~V~v~r~~~ 99 (410)
T 3asi_A 91 NVMISRDTS 99 (410)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEcCC
Confidence 999999864
No 24
>1d2s_A SHBG, sex hormone-binding globulin; steroid transport, laminin G-like domain, jellyroll, androgen binding protein (ABP); HET: DHT; 1.55A {Homo sapiens} SCOP: b.29.1.4 PDB: 1kdk_A* 1kdm_A*
Probab=99.74 E-value=2.8e-17 Score=162.49 Aligned_cols=88 Identities=19% Similarity=0.246 Sum_probs=74.3
Q ss_pred ceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeEE
Q psy9685 292 NIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLI 371 (979)
Q Consensus 292 ~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V 371 (979)
..++|+|+|||++++|||||.+.. +..||++|+|++|+|+++++.|++.. ...+...+|||+||+|
T Consensus 26 ~~~~is~~FrT~~~~GlLly~~~~-------------~~~df~~l~L~~G~l~~~~~~g~~~~-~~~s~~~vnDG~WH~V 91 (170)
T 1d2s_A 26 TKTSSSFEVRTWDPEGVIFYGDTN-------------PKDDWFMLGLRDGRPEIQLHNHWAQL-TVGAGPRLDDGRWHQV 91 (170)
T ss_dssp CCCEEEEEEEESCSSEEEEEEEEE-------------TTTEEEEEEEETTEEEEEEESSSCEE-EEECSCCCCSSSCEEE
T ss_pred CceEEEEEEEeCCCCEEEEEecCC-------------CCCCEEEEEEeCCEEEEEEECCCceE-EEeCCCccCCCCCEEE
Confidence 357899999999999999999753 14699999999999999999998754 3356788999999999
Q ss_pred EEEeecceeeeE------------------EEEEccCCCc
Q psy9685 372 QTISSTGILDVQ------------------VLYLGGIPET 393 (979)
Q Consensus 372 ~~~~~~~~l~l~------------------vlyvGG~p~~ 393 (979)
.+.+..+.+.|. .|||||+|..
T Consensus 92 ~v~~~~~~~~L~VD~~~~~~~~~~~~l~~~~lylGG~p~~ 131 (170)
T 1d2s_A 92 EVKMEGDSVLLEVDGEEVLRLRQVSGHPIMRIALGGLLFP 131 (170)
T ss_dssp EEEEETTEEEEEETTEEEEEETTCCCCCEEEEEESSCSSC
T ss_pred EEEEeCCEEEEEECCeeeeeeccCCCcccccEEEECcccc
Confidence 999988877653 2899999875
No 25
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.74 E-value=6.7e-18 Score=160.21 Aligned_cols=107 Identities=43% Similarity=1.032 Sum_probs=68.2
Q ss_pred ccccCC--CCCCCCCCEEeeCCCCcEEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCC
Q psy9685 639 EIDECL--SNPCMNGGQCEDRLAGFVCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRG 716 (979)
Q Consensus 639 ~~~~C~--~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G 716 (979)
++++|. ..+|.++++|++..++|.|.|++||+|..|+. +...|...+|.++++|.+. .++|+|.|++||+|
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~-~~~~C~~~~C~~~~~C~~~------~g~~~C~C~~G~~G 76 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI-DVNECVSNPCQNDATCLDQ------IGEFQCICMPGYEG 76 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCE-ECCTTTTCCCCSSCEEEEC------SSCEEEECCTTEES
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccc-cCccCCCCCCCCCCEEeCC------CCCceeeCCCCCcC
Confidence 445554 34555555665555555666666666655542 1233455555555666554 34566777777777
Q ss_pred CCccccCCCCCCCCCCCCceEecCCCCeEEecCCCC
Q psy9685 717 SRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTA 752 (979)
Q Consensus 717 ~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~ 752 (979)
..|+.++++|...+|.++++|++..++|+|.|++||
T Consensus 77 ~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~ 112 (135)
T 2vj3_A 77 VHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGF 112 (135)
T ss_dssp SSSCEECCTTTTCCSTTTCEEEECSSCEEEECCTTE
T ss_pred CcceecCCcccCCCcCCCCEeECCCCCeEEECCCCC
Confidence 777667788887888888888888888888887643
No 26
>1f5f_A SHBG, sex hormone-binding globulin; jellyroll, signaling protein; HET: DHT; 1.70A {Homo sapiens} SCOP: b.29.1.4 PDB: 1lhw_A* 1lho_A* 1lhn_A* 1lhv_A* 1lhu_A*
Probab=99.73 E-value=4.8e-17 Score=166.53 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=76.3
Q ss_pred cccCcccccCCCcce--eeEEEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEE
Q psy9685 261 YNFTAATFGHENTTN--SLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEM 338 (979)
Q Consensus 261 ~~~~~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l 338 (979)
.+..+..|+...... .++.++.. ....++|+|+|||++++|||||.+.. ...||++|+|
T Consensus 11 ~~~~~~~F~~~~~~~~~~y~~~~~~------~~~~~~is~~frT~~~~GlLly~~~~-------------~~~d~~~l~L 71 (205)
T 1f5f_A 11 HDPPAVHLSNGPGQEPIAVMTFDLT------KITKTSSSFEVRTWDPEGVIFYGDTN-------------PKDDWFMLGL 71 (205)
T ss_dssp --CCCEESCCTTCCSCSEEEEEEGG------GCCCCEEEEEEEESCSSEEEEEEEEE-------------TTTEEEEEEE
T ss_pred cCCccEEeccCCCCcEeEEEEECCC------CCCceEEEEEEEeCCCCEEEEEeCCC-------------CCCCEEEEEE
Confidence 345567788655444 33344432 12337899999999999999999753 1359999999
Q ss_pred ecCEEEEEEEcCCcCceeeecCeeecCCCeeEEEEEeecceeee
Q psy9685 339 EAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQTISSTGILDV 382 (979)
Q Consensus 339 ~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V~~~~~~~~l~l 382 (979)
++|+|+++++.|++.. .+.+...||||+||+|.+.+..+.+.|
T Consensus 72 ~~G~l~~~~~~g~~~~-~~~s~~~vnDG~WH~V~v~r~~~~~~L 114 (205)
T 1f5f_A 72 RDGRPEIQLHNHWAQL-TVGAGPRLDDGRWHQVEVKMEGDSVLL 114 (205)
T ss_dssp ETTEEEEEEESSSCEE-EEECSCCCCSSSCEEEEEEEETTEEEE
T ss_pred ECCEEEEEEECCCceE-EEecCCccCCCCCEEEEEEEeCCEEEE
Confidence 9999999999998764 335678899999999999888776655
No 27
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.72 E-value=7.7e-19 Score=177.00 Aligned_cols=145 Identities=26% Similarity=0.637 Sum_probs=121.6
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCC---CccccCCCCC----CCCCCCCceEecCC-----CCeEEecC
Q psy9685 682 CADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGS---RCEINIDECA----SGPCKNSGQCIDDV-----NAFICNCT 749 (979)
Q Consensus 682 c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~---~C~~~~~~C~----~~~C~~~g~C~~~~-----g~~~C~C~ 749 (979)
+.+.+|.+ ++|++. .++|+|.|++||+|. .|+ ++++|. ..+|.++++|++.. ++|+|.|+
T Consensus 8 ~~~~pC~n-g~C~~~------~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~ 79 (186)
T 1z1y_A 8 TVDTICXN-GQLVQM------SNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCI 79 (186)
T ss_dssp CTTCCCBT-EEEEEC------SSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEEC
T ss_pred CCCCCCCC-CEeECC------CCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCC
Confidence 35678885 499887 567999999999987 897 899998 77899999999998 89999999
Q ss_pred CCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccc
Q psy9685 750 NTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECE 829 (979)
Q Consensus 750 ~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~ 829 (979)
+||+|..+. | .+++|.
T Consensus 80 ~G~~g~~~~--------------------------------------------------------------C--~~d~C~ 95 (186)
T 1z1y_A 80 EGYTLXEDT--------------------------------------------------------------C--VLDVCQ 95 (186)
T ss_dssp TTEEEETTE--------------------------------------------------------------E--EEGGGT
T ss_pred CCCccCCCC--------------------------------------------------------------C--CCCcCc
Confidence 988775432 2 267886
Q ss_pred cCCCCCCCCeeec----cCCCCeeecCCCCCCC-----CCCCCC--CCCCCCCC-CCCCeeecCCCCCCCeEeecCCCCC
Q psy9685 830 LSSDMCGNNGECI----NQPGDYKCACQFDTCG-----YLCNFP--DPCKDEPC-QNGGTCHEDCRHQADYKCDCLPGWT 897 (979)
Q Consensus 830 ~~~~~C~~~g~C~----~~~gs~~C~C~~g~~G-----~~C~~~--~~C~~~~C-~~~g~C~~~c~~~~~~~C~C~~G~~ 897 (979)
. ..|.++++|+ +..++|.|.|++||.| ..|+++ ++|.. +| .++++|. +..++|+|.|.+||+
T Consensus 96 ~--~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~C~~~~~~C~---n~~g~y~C~C~~G~~ 169 (186)
T 1z1y_A 96 Y--XNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-XCNTDNEVCX---NVEGVYXCQCMEGFT 169 (186)
T ss_dssp T--CCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCCC-CCCTTTEEEE---EETTEEEEEECTTCE
T ss_pred C--CCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCcccc-cccccCccee---cCCCCeeeECCCCCc
Confidence 3 4599899999 8889999999999988 889874 89984 89 8999999 457899999999999
Q ss_pred CCCCCcC
Q psy9685 898 GKNCTEV 904 (979)
Q Consensus 898 G~~C~~~ 904 (979)
|..|+..
T Consensus 170 g~~~~~~ 176 (186)
T 1z1y_A 170 FDXEXNV 176 (186)
T ss_dssp EETTTTE
T ss_pred cCccccc
Confidence 9998754
No 28
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.72 E-value=2.1e-18 Score=173.77 Aligned_cols=144 Identities=24% Similarity=0.527 Sum_probs=123.5
Q ss_pred CCCCCCCCCCeeccCCCceeeecCCCCCCC---ccccccccCC----CCCCCCCCEEeeCC-----CCcEEecCCCcccC
Q psy9685 605 CVTHNCQNGARCIDGVARYSCECTPGWEGA---LCEKEIDECL----SNPCMNGGQCEDRL-----AGFVCNCSEEYVGE 672 (979)
Q Consensus 605 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~---~C~~~~~~C~----~~~C~~~g~C~~~~-----~~~~C~C~~G~~G~ 672 (979)
+..+||.++ +|++..++|+|.|++||+|. .|+ ++++|. ..+|.++++|++.. ++|.|.|++||+|.
T Consensus 8 ~~~~pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~ 85 (186)
T 1z1y_A 8 TVDTICXNG-QLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX 85 (186)
T ss_dssp CTTCCCBTE-EEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE
T ss_pred CCCCCCCCC-EeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC
Confidence 346788865 99999999999999999887 786 789998 67899999999998 89999999999998
Q ss_pred ccccccccccCCCCCCCCceec----CCCCCCCCCCCCeecCCCCCCC-----CCccc-cCCCCCCCCC-CCCceEecCC
Q psy9685 673 RCESLRQISCADQPCYFGAVCQ----DTKISPYFPQGPICDCPPGYRG-----SRCEI-NIDECASGPC-KNSGQCIDDV 741 (979)
Q Consensus 673 ~C~~~~~~~c~~~~C~~~~~C~----~~~~~~~~~~~~~C~C~~G~~G-----~~C~~-~~~~C~~~~C-~~~g~C~~~~ 741 (979)
.++.. ...|...+|.++++|. +. .++|+|.|++||+| ..|+. ++++|.. +| .++++|++..
T Consensus 86 ~~~C~-~d~C~~~~C~~~g~C~~~~~~~------~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~-~C~~~~~~C~n~~ 157 (186)
T 1z1y_A 86 EDTCV-LDVCQYXNCGESGECIVEYLSE------IQSAGCSCAIGXVPNPEDEXXCTXTGETACQL-XCNTDNEVCXNVE 157 (186)
T ss_dssp TTEEE-EGGGTTCCCCTTEEEEEEEETT------EEEEEEEECTEEEEETTTTTEEEEEECCCCCC-CCCTTTEEEEEET
T ss_pred CCCCC-CCcCcCCCCCCCCEEeeCCcCC------CCCceEECCCCCcccCCCCCcceEcCCCcccc-cccccCcceecCC
Confidence 65433 4678888999999998 54 56789999999998 78873 2589984 89 8899999999
Q ss_pred CCeEEecCCCCcCCCCc
Q psy9685 742 NAFICNCTNTATGASMG 758 (979)
Q Consensus 742 g~~~C~C~~g~~g~~~~ 758 (979)
++|+|.|++||+|..+.
T Consensus 158 g~y~C~C~~G~~g~~~~ 174 (186)
T 1z1y_A 158 GVYXCQCMEGFTFDXEX 174 (186)
T ss_dssp TEEEEEECTTCEEETTT
T ss_pred CCeeeECCCCCccCccc
Confidence 99999999999998764
No 29
>1pz7_A Agrin; structural protein; 1.42A {Gallus gallus} SCOP: b.29.1.4 PDB: 1pz8_A 1pz9_A 1q56_A
Probab=99.71 E-value=1.1e-16 Score=163.76 Aligned_cols=90 Identities=22% Similarity=0.311 Sum_probs=74.9
Q ss_pred cceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeE
Q psy9685 291 RNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHL 370 (979)
Q Consensus 291 ~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~ 370 (979)
...++|+|+|||.+++|||||.+.. .+..|||+|+|.+|+|++++++|++...+ .+...|+||+||+
T Consensus 47 ~~~~~is~~frT~~~~GlLl~~g~~------------~~~~dfl~l~L~~G~l~~~~~~G~g~~~v-~s~~~lnDg~WH~ 113 (204)
T 1pz7_A 47 LQSNHFELSIKTEATQGLILWSGKG------------LERSDYIALAIVDGFVQMMYDLGSKPVVL-RSTVPINTNHWTH 113 (204)
T ss_dssp ESEEEEEEEEEECCSSEEEEEESCC------------STTCCEEEEEEETTEEEEEEESSSCCEEE-EEEEECCSSSCEE
T ss_pred ceeEEEEEEEEcCCCCeEEEEeCCC------------CCCCCeEEEEEECCEEEEEEECCCCeEEE-ECCcccCCCCeEE
Confidence 3568999999999999999999642 12469999999999999999999987644 5678999999999
Q ss_pred EEEEeecceeeeEE----------------------EEEccCCCc
Q psy9685 371 IQTISSTGILDVQV----------------------LYLGGIPET 393 (979)
Q Consensus 371 V~~~~~~~~l~l~v----------------------lyvGG~p~~ 393 (979)
|.+.+..+.+.|.| |||||+|..
T Consensus 114 V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~ 158 (204)
T 1pz7_A 114 IKAYRVQREGSLQVGNEAPITGSSPLGATQLDTDGALWLGGMERL 158 (204)
T ss_dssp EEEEEETTEEEEEETTSCCEEEECCSSCCCEEECCEEEESSCSCC
T ss_pred EEEEEeCCEEEEEECCcceEEEECCCCCceEcCCCCEEEecCCCc
Confidence 99999887765532 888888865
No 30
>2r1d_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 2.60A {Rattus norvegicus} SCOP: b.29.1.4 PDB: 3biw_E*
Probab=99.71 E-value=7.6e-17 Score=166.47 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=67.3
Q ss_pred ceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeEE
Q psy9685 292 NIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLI 371 (979)
Q Consensus 292 ~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V 371 (979)
...+|+|+|||++++|||||.+... ...||++|+|++|+|++++++|++...+..+...|+||+||+|
T Consensus 63 ~~~~isl~FrT~~~~GlLl~~~~~~------------~~~dfi~L~L~~G~l~~~~~~G~~~~~~~~~~~~vnDG~WH~V 130 (226)
T 2r1d_A 63 RADRLAIGFSTVQKEAVLVRVDSSS------------GLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVV 130 (226)
T ss_dssp SEEEEEEEEECCCSSEEEEEEEECT------------TCCCEEEEEEETTEEEEEEESSSCEEEEECCSSCCCSSSCEEE
T ss_pred cccEEEEEEEeCCCCEEEEEecCCC------------CCCCEEEEEEECCEEEEEEECCCCcEEEEeCCeEecCCCCEEE
Confidence 3458999999999999999975321 1469999999999999999999987766666678999999999
Q ss_pred EEEeecceeeeE
Q psy9685 372 QTISSTGILDVQ 383 (979)
Q Consensus 372 ~~~~~~~~l~l~ 383 (979)
.+.+.++.+.|.
T Consensus 131 ~v~r~~~~~~L~ 142 (226)
T 2r1d_A 131 RFTRSGGNATLQ 142 (226)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEeCCEEEEE
Confidence 999998876554
No 31
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.71 E-value=2.3e-17 Score=156.47 Aligned_cols=124 Identities=33% Similarity=0.915 Sum_probs=107.5
Q ss_pred CCCCCCC--CCCCCCCCeeccCCCceeeecCCCCCCCccccccccCCCCCCCCCCEEeeCCCCcEEecCCCcccCccccc
Q psy9685 600 VDIDECV--THNCQNGARCIDGVARYSCECTPGWEGALCEKEIDECLSNPCMNGGQCEDRLAGFVCNCSEEYVGERCESL 677 (979)
Q Consensus 600 ~~~~~C~--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~ 677 (979)
.++++|. ..+|.+++.|++..++|.|.|++||+|..|+.++++|...+|.++++|++..++|.|.|++||+|..|+..
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 82 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 82 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec
Confidence 3678998 68899999999999999999999999999998899999999999999999999999999999999999742
Q ss_pred cccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCCCC
Q psy9685 678 RQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECASGP 730 (979)
Q Consensus 678 ~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~ 730 (979)
...|...+|.++++|.+. .+.|+|.|++||+|..|+.++++|...+
T Consensus 83 -~~~C~~~~C~~~g~C~~~------~g~~~C~C~~G~~G~~C~~~i~~C~~~~ 128 (135)
T 2vj3_A 83 -TDECASSPCLHNGRCLDK------INEFQCECPTGFTGHLCQVDLHHILDAQ 128 (135)
T ss_dssp -CCTTTTCCSTTTCEEEEC------SSCEEEECCTTEESSSSCEECC------
T ss_pred -CCcccCCCcCCCCEeECC------CCCeEEECCCCCcCCccCccCccccCCC
Confidence 346888899999999986 5678999999999999998999997653
No 32
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.71 E-value=6.5e-18 Score=184.04 Aligned_cols=158 Identities=38% Similarity=0.980 Sum_probs=64.3
Q ss_pred CCCCCCCEEeeCCCCcEEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCC
Q psy9685 646 NPCMNGGQCEDRLAGFVCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDE 725 (979)
Q Consensus 646 ~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~ 725 (979)
.+|.++|.|.. .+.|.|++||+|..|+.. .|. .+|.++++|... +.|.|.+||+|..|+ .+.
T Consensus 153 ~~C~~~G~C~~---~~~C~C~~G~~G~~C~~~---~C~-~~C~~~G~C~~~---------~~C~C~~G~~G~~C~--~~~ 214 (324)
T 2ygq_A 153 GGCRNGGFCNE---RRICECPDGFHGPHCEKA---LCT-PRCMNGGLCVTP---------GFCICPPGFYGVNCD--KAN 214 (324)
T ss_dssp SCCCSSCEECT---TSCEECCTTEESSSSCEE---SSS-SCCCTTCEECSS---------CCEECCTTCBTTTTC--BCC
T ss_pred CCCCCCCEECC---CCeEECCCCCcCCCCCCC---CCC-CCCCCCCEEcCC---------CEEeCCCCccCCCcc--cCc
Confidence 56888888864 368999999999888752 354 468888888642 478999999999886 345
Q ss_pred CCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCC
Q psy9685 726 CASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSG 805 (979)
Q Consensus 726 C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~ 805 (979)
|. .+|.++|+|++. ++|.|++
T Consensus 215 C~-~~C~~~G~C~~~---~~C~C~~------------------------------------------------------- 235 (324)
T 2ygq_A 215 CS-TTCFNGGTCFYP---GKCICPP------------------------------------------------------- 235 (324)
T ss_dssp CS-SCCCSSCCBSCS---SCBCCCT-------------------------------------------------------
T ss_pred CC-CCCCCCCeeCCC---CeeeCCC-------------------------------------------------------
Confidence 75 468888888652 4566665
Q ss_pred CCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCCC
Q psy9685 806 PGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCNFPDPCKDEPCQNGGTCHEDCRHQ 885 (979)
Q Consensus 806 ~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~C~~~c~~~ 885 (979)
||.|..|+ +++|. ..|.++|+|+. .++|.|++||.|..|+. +.|. .+|.++|+|..
T Consensus 236 ---------G~~G~~C~--~~~C~---~~C~~~g~C~~---~~~C~C~~G~~G~~C~~-~~C~-~~C~~~g~C~~----- 291 (324)
T 2ygq_A 236 ---------GLEGEQCE--ISKCP---QPCRNGGKCIG---KSKCKCSKGYQGDLCSK-PVCE-PGCGAHGTCHE----- 291 (324)
T ss_dssp ---------TCCTTTTC---------------------------------------------------------------
T ss_pred ---------CccCCCCC--cCcCC---CcCCCCCEECC---CCEEECCCCCcCCCCcC-CCCC-CCCCCCCEECC-----
Confidence 45555564 34563 56888899984 46999999999999984 5675 57989999982
Q ss_pred CCeEeecCCCCCCCCCCcCC
Q psy9685 886 ADYKCDCLPGWTGKNCTEVP 905 (979)
Q Consensus 886 ~~~~C~C~~G~~G~~C~~~~ 905 (979)
.++|.|.+||+|..|+...
T Consensus 292 -~~~C~C~~G~~G~~C~~~~ 310 (324)
T 2ygq_A 292 -PNKCQCQEGWHGRHCNKRY 310 (324)
T ss_dssp --------------------
T ss_pred -CCEeECCCCCcCCCCCCCC
Confidence 5799999999999998653
No 33
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=99.71 E-value=1.5e-16 Score=182.19 Aligned_cols=78 Identities=19% Similarity=0.319 Sum_probs=66.0
Q ss_pred cceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeE
Q psy9685 291 RNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHL 370 (979)
Q Consensus 291 ~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~ 370 (979)
...++|+|+|||++++|||||.+.. +..||++|+|++|+|++++++|++.. ++.+...++||+||+
T Consensus 60 ~~~~~is~~FrT~~~~GlLly~~~~-------------~~~df~~l~L~~G~l~~~~~~g~~~~-~~~~~~~~nDg~WH~ 125 (422)
T 1h30_A 60 PTRLVAEFDFRTFDPEGILLFAGGH-------------QDSTWIVLALRAGRLELQLRYNGVGR-VTSSGPVINHGMWQT 125 (422)
T ss_dssp CCCCEEEEEEEECCSSEEEEEEESC-------------TTSEEEEEEEETTEEEEEEEETTEEE-EEEEEEECCSSCCEE
T ss_pred CCceEEEEEEEeCCCCeEEEEECCC-------------CCCcEEEEEEECCEEEEEEECCCCcE-EEecCceecCCCCEE
Confidence 4568899999999999999999763 14699999999999999999998764 445678999999999
Q ss_pred EEEEeecceeee
Q psy9685 371 IQTISSTGILDV 382 (979)
Q Consensus 371 V~~~~~~~~l~l 382 (979)
|.+.+..+.+.|
T Consensus 126 V~v~r~~~~~~L 137 (422)
T 1h30_A 126 ISVEELARNLVI 137 (422)
T ss_dssp EEEEECSSEEEE
T ss_pred EEEEEcCCEEEE
Confidence 999887765543
No 34
>3v64_A Low-density lipoprotein receptor-related protein; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} PDB: 3v65_A
Probab=99.70 E-value=1.5e-16 Score=160.77 Aligned_cols=91 Identities=22% Similarity=0.361 Sum_probs=76.0
Q ss_pred ccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCee
Q psy9685 290 VRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNH 369 (979)
Q Consensus 290 ~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH 369 (979)
....++|+|+|||++++|||||.+... +..||++|+|.+|+|++++++|++...+ .+...++||+||
T Consensus 33 ~~~~~~isl~frT~~~~GlLl~~~~~~------------~~~d~l~l~L~~G~l~~~~~~G~~~~~l-~s~~~v~Dg~WH 99 (191)
T 3v64_A 33 ALQSNHFELSLRTEATQGLVLWIGKAA------------ERADYMALAIVDGHLQLSYDLGSQPVVL-RSTVKVNTNRWL 99 (191)
T ss_dssp EESEEEEEEEEECSCSSEEEEEESCCS------------TTCCEEEEEEETTEEEEEEESSSCCEEE-EEEEECTTSSCE
T ss_pred cccceEEEEEEEeCCCCeEEEEeCCCC------------CCCcEEEEEEECCEEEEEEECCCccEEE-ecCccccCCCCE
Confidence 356789999999999999999996521 2569999999999999999999887644 456789999999
Q ss_pred EEEEEeecceeeeEE----------------------EEEccCCCc
Q psy9685 370 LIQTISSTGILDVQV----------------------LYLGGIPET 393 (979)
Q Consensus 370 ~V~~~~~~~~l~l~v----------------------lyvGG~p~~ 393 (979)
+|.+.+..+.+.|.+ |||||+|..
T Consensus 100 ~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~~l~~~~~lylGG~p~~ 145 (191)
T 3v64_A 100 RIRAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKL 145 (191)
T ss_dssp EEEEEEETTEEEEEETTSCCEEEECCTTCCCEEECSEEEESCCSSC
T ss_pred EEEEEEeCCEEEEEECCeeeEeEECCCCcceeccCCceEEcccCcc
Confidence 999999888765542 888888865
No 35
>2r16_A Neurexin-1-alpha; beta-sandwich, cell adhesion, splicing; 1.04A {Bos taurus}
Probab=99.70 E-value=2.2e-16 Score=158.12 Aligned_cols=79 Identities=18% Similarity=0.365 Sum_probs=67.8
Q ss_pred cceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeE
Q psy9685 291 RNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHL 370 (979)
Q Consensus 291 ~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~ 370 (979)
...++|+|+|||++++|||||.+.. +..||++|+|.+|+|++++++|++...+ .+...||||+||+
T Consensus 26 ~~~~~isl~FrT~~~~GlLl~~~~~-------------~~~d~l~L~L~~G~l~~~~~~G~~~~~~-~~~~~lnDg~WH~ 91 (182)
T 2r16_A 26 TEAEDVSLRFRSQRAYGILMATTSR-------------DSADTLRLELDAGRVKLTVNLGKGPETL-FAGYNLNDNEWHT 91 (182)
T ss_dssp ESEEEEEEEEECSCSSEEEEEEECS-------------SSCCEEEEEEETTEEEEEEESSSCCEEE-EECSSCCSSSCEE
T ss_pred ccceEEEEEEEECCCCEEEEEeCCC-------------CCCCEEEEEEECCEEEEEEECCCCceEE-EcCcccCCCCeEE
Confidence 4568899999999999999999752 1569999999999999999999987644 4677899999999
Q ss_pred EEEEeecceeeeE
Q psy9685 371 IQTISSTGILDVQ 383 (979)
Q Consensus 371 V~~~~~~~~l~l~ 383 (979)
|.+.+.++.+.|.
T Consensus 92 V~v~r~~~~~~L~ 104 (182)
T 2r16_A 92 VRVVRRGKSLKLT 104 (182)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEECCEEEEE
Confidence 9999988876554
No 36
>3pve_A Agrin, AGRN protein; mRNA splicing, structural genomics, PSI-2, protein structure initiative; 1.40A {Mus musculus}
Probab=99.70 E-value=2.6e-16 Score=158.77 Aligned_cols=81 Identities=12% Similarity=0.119 Sum_probs=66.3
Q ss_pred cceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeE
Q psy9685 291 RNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHL 370 (979)
Q Consensus 291 ~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~ 370 (979)
...++|+|+|||++++|||||.+... ....||++|+|.+|+|+++++.|++... ..+...++||+||+
T Consensus 33 ~~~~~isl~frT~~~~GlLl~~~~~~-----------~~~~d~l~l~L~~G~l~~~~~~G~g~~~-l~s~~~l~Dg~WH~ 100 (189)
T 3pve_A 33 GEKMALEMVFLARGPSGLLLYNGQKT-----------DGKGDFVSLALHNRHLEFRYDLGKGAAI-IRSKEPIALGTWVR 100 (189)
T ss_dssp ---CEEEEEEEESSSCEEEEEEESCC------------CCSCEEEEEEETTEEEEEEESSSCEEE-EECSSCCCTTSEEE
T ss_pred cceEEEEEEEEeCCCCEEEEEecCCC-----------CCCCCeEEEEEECCEEEEEEecCCCCEE-EEcCcccCCCCEEE
Confidence 45789999999999999999997531 1156999999999999999999988654 34678999999999
Q ss_pred EEEEeecceeeeE
Q psy9685 371 IQTISSTGILDVQ 383 (979)
Q Consensus 371 V~~~~~~~~l~l~ 383 (979)
|.+.+..+.+.|.
T Consensus 101 V~v~r~~~~~~L~ 113 (189)
T 3pve_A 101 VFLERNGRKGALQ 113 (189)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEEeCCEEEEE
Confidence 9999998876554
No 37
>3sh4_A LG3 peptide; actin disassambly, integrin alpha12 BETA1, metal binding Pro; 1.50A {Homo sapiens} PDB: 3sh5_A
Probab=99.69 E-value=2.5e-16 Score=159.68 Aligned_cols=99 Identities=17% Similarity=0.237 Sum_probs=73.7
Q ss_pred eeEEEecCcchhccccceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCce
Q psy9685 276 SLVTVAVGGVARRAVRNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPES 355 (979)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~ 355 (979)
+|+.++.....+......++|+|+|||++++|||||.+.... +.....|||+|+|.+|+|++++++|++...
T Consensus 14 syl~lp~~~~~~~~~~~~~~is~~frT~~~~GlLl~~~~~~~--------~~~~~~d~l~l~L~~G~l~~~~~~G~g~~~ 85 (195)
T 3sh4_A 14 GFLAFPGHVFSRSLPEVPETIELEVRTSTASGLLLWQGVEVG--------EAGQGKDFISLGLQDGHLVFRYQLGSGEAR 85 (195)
T ss_dssp EEEEECGGGGCCCSTTCCEEEEEEEEECCSSEEEEEECCCTT--------CTTSTTCEEEEEEETTEEEEEEECSSCEEE
T ss_pred EEEEEccccccccccccceEEEEEEEeCCCCcEEEEeccccc--------CCCCCCcEEEEEEeCCEEEEEEECCCCcEE
Confidence 444554432222222345799999999999999999964200 111256999999999999999999988654
Q ss_pred eeecCeeecCCCeeEEEEEeecceeeeE
Q psy9685 356 YNVGGVKLADGNNHLIQTISSTGILDVQ 383 (979)
Q Consensus 356 ~~~~~~~l~DG~wH~V~~~~~~~~l~l~ 383 (979)
+.+...|+||+||+|.+.+..+.+.|.
T Consensus 86 -~~s~~~l~Dg~WH~V~v~r~~~~~~L~ 112 (195)
T 3sh4_A 86 -LVSEDPINDGEWHRVTALREGRRGSIQ 112 (195)
T ss_dssp -EEEEEECCSSSCEEEEEEEETTEEEEE
T ss_pred -EEcCceeCCCCeEEEEEEEeCCEEEEE
Confidence 446789999999999999998877664
No 38
>2h0b_A Neurexin-1-alpha; B-sandwich, cell adhesion; 2.10A {Bos taurus}
Probab=99.69 E-value=1.8e-16 Score=159.60 Aligned_cols=78 Identities=14% Similarity=0.210 Sum_probs=66.0
Q ss_pred cceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCcee--eecCeeecCCCe
Q psy9685 291 RNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESY--NVGGVKLADGNN 368 (979)
Q Consensus 291 ~~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~--~~~~~~l~DG~w 368 (979)
...++|+|+|||++++|+|||.+. ..||++|+|.+|+|++++++|++.... ..+...|+||+|
T Consensus 27 ~~~~~isl~frT~~~~GlLl~~g~---------------~~d~l~l~L~~G~l~~~~~~G~g~~~~~~~~~~~~l~Dg~W 91 (184)
T 2h0b_A 27 SSSDEITLSFKTLQRNGLMLHTGK---------------SADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAW 91 (184)
T ss_dssp ESEEEEEEEEEESCSCEEEEEECC---------------TTEEEEEEEETTEEEEEEEESSCEEEEEECCSSSCSSSSSC
T ss_pred cCccEEEEEEEeCCCCEEEEEeCC---------------CCCEEEEEEECCEEEEEEECCCCeEEEEEecCCcccCCCCe
Confidence 356889999999999999999854 469999999999999999999886432 245778999999
Q ss_pred eEEEEEeecceeeeE
Q psy9685 369 HLIQTISSTGILDVQ 383 (979)
Q Consensus 369 H~V~~~~~~~~l~l~ 383 (979)
|+|.+.+..+.+.|.
T Consensus 92 H~V~v~r~~~~~~L~ 106 (184)
T 2h0b_A 92 HDVKVTRNLRQVTIS 106 (184)
T ss_dssp EEEEEEEETTEEEEE
T ss_pred EEEEEEEeCCEEEEE
Confidence 999999988776553
No 39
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.68 E-value=2.7e-17 Score=179.21 Aligned_cols=160 Identities=39% Similarity=0.981 Sum_probs=77.6
Q ss_pred CCCCCCCCCCCCeeccCCCceeeecCCCCCCCccccccccCCCCCCCCCCEEeeCCCCcEEecCCCcccCcccccccccc
Q psy9685 603 DECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEIDECLSNPCMNGGQCEDRLAGFVCNCSEEYVGERCESLRQISC 682 (979)
Q Consensus 603 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~c 682 (979)
..| +.+|.+++.|.. .+.|.|.+||.|..|+. +.|. .+|.++|+|+. .+.|.|++||+|..|+.. .|
T Consensus 149 ~~C-~~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~~---~C 215 (324)
T 2ygq_A 149 AEC-PGGCRNGGFCNE---RRICECPDGFHGPHCEK--ALCT-PRCMNGGLCVT---PGFCICPPGFYGVNCDKA---NC 215 (324)
T ss_dssp CCC-SSCCCSSCEECT---TSCEECCTTEESSSSCE--ESSS-SCCCTTCEECS---SCCEECCTTCBTTTTCBC---CC
T ss_pred CCC-CCCCCCCCEECC---CCeEECCCCCcCCCCCC--CCCC-CCCCCCCEEcC---CCEEeCCCCccCCCcccC---cC
Confidence 456 367999999975 46899999999999975 4575 47999999975 468999999999999853 35
Q ss_pred CCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccc
Q psy9685 683 ADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGE 762 (979)
Q Consensus 683 ~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~ 762 (979)
. .+|.++++|... ++|.|++||+|..|+ +++|. .+|.++|+|+. .++|.|++||+|
T Consensus 216 ~-~~C~~~G~C~~~---------~~C~C~~G~~G~~C~--~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G-------- 271 (324)
T 2ygq_A 216 S-TTCFNGGTCFYP---------GKCICPPGLEGEQCE--ISKCP-QPCRNGGKCIG---KSKCKCSKGYQG-------- 271 (324)
T ss_dssp S-SCCCSSCCBSCS---------SCBCCCTTCCTTTTC------------------------------------------
T ss_pred C-CCCCCCCeeCCC---------CeeeCCCCccCCCCC--cCcCC-CcCCCCCEECC---CCEEECCCCCcC--------
Confidence 4 679889999753 589999999999997 56786 67998899974 457877775554
Q ss_pred cccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeec
Q psy9685 763 VRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECI 842 (979)
Q Consensus 763 ~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~ 842 (979)
..|+ .++|. ..|.++|+|+
T Consensus 272 --------------------------------------------------------~~C~--~~~C~---~~C~~~g~C~ 290 (324)
T 2ygq_A 272 --------------------------------------------------------DLCS--KPVCE---PGCGAHGTCH 290 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------CCCc--CCCCC---CCCCCCCEEC
Confidence 4454 34563 4688889998
Q ss_pred cCCCCeeecCCCCCCCCCCCC
Q psy9685 843 NQPGDYKCACQFDTCGYLCNF 863 (979)
Q Consensus 843 ~~~gs~~C~C~~g~~G~~C~~ 863 (979)
+ .++|.|++||.|..|+.
T Consensus 291 ~---~~~C~C~~G~~G~~C~~ 308 (324)
T 2ygq_A 291 E---PNKCQCQEGWHGRHCNK 308 (324)
T ss_dssp ---------------------
T ss_pred C---CCEeECCCCCcCCCCCC
Confidence 6 46999999999999974
No 40
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.68 E-value=3.3e-17 Score=193.57 Aligned_cols=127 Identities=27% Similarity=0.512 Sum_probs=98.0
Q ss_pred CCCCCceecCCCCCCCCCCCCeecCC----CCCCCCCccccCCCCCC---CCCCCCceEecCCCCeEEecCCCCcCCCCc
Q psy9685 686 PCYFGAVCQDTKISPYFPQGPICDCP----PGYRGSRCEINIDECAS---GPCKNSGQCIDDVNAFICNCTNTATGASMG 758 (979)
Q Consensus 686 ~C~~~~~C~~~~~~~~~~~~~~C~C~----~G~~G~~C~~~~~~C~~---~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~ 758 (979)
+|.++|+|.. ++|.|. +||+|..|+.++++|.. .+|.++|+|.+ ++|.|++||+|..|.
T Consensus 494 ~Cs~~G~C~~----------g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 494 VCSQRGECLC----------GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCN 559 (690)
T ss_dssp GGGGSEEECS----------SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSC
T ss_pred CCCCCCEEEC----------CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCc
Confidence 4778888874 379999 99999999988899985 47999999987 589999988877653
Q ss_pred cccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccC-CCCCCC
Q psy9685 759 CLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELS-SDMCGN 837 (979)
Q Consensus 759 c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~-~~~C~~ 837 (979)
|. .++++|... ...|.+
T Consensus 560 C~--------------------------------------------------------------~~~~~C~~~~g~~C~~ 577 (690)
T 3fcs_B 560 CT--------------------------------------------------------------TRTDTCMSSNGLLCSG 577 (690)
T ss_dssp EE--------------------------------------------------------------CCCTTTBCTTSSBTSS
T ss_pred cC--------------------------------------------------------------CCCCcccCCCCCCCCC
Confidence 21 234555422 256888
Q ss_pred CeeeccCCCCeeecC-CCCCCCCCCCCCCCCCCCCCCCCCeeecCCCCCCCeEeecCCCCCCCCCCcC
Q psy9685 838 NGECINQPGDYKCAC-QFDTCGYLCNFPDPCKDEPCQNGGTCHEDCRHQADYKCDCLPGWTGKNCTEV 904 (979)
Q Consensus 838 ~g~C~~~~gs~~C~C-~~g~~G~~C~~~~~C~~~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~~ 904 (979)
+|+|++. .|.| .+||.|..|+....| ..+|.++|.|.+ |..+|+|..|+..
T Consensus 578 ~G~C~~g----~C~C~~~Gy~G~~Ce~C~~C-~~~C~~~g~Cv~-----------C~~g~tG~~C~~~ 629 (690)
T 3fcs_B 578 RGKCECG----SCVCIQPGSYGDTCEKCPTC-PDACTFKKECVE-----------CKKFDRGALHDEN 629 (690)
T ss_dssp SCEEETT----EEECCSTTCBSTTSCBCTTS-CCTTTSCCGGGT-----------TTTTCCSSSSSSS
T ss_pred CCEEeCC----EEECCCCCccCCCcCcCCCC-CCCCCCCCCccc-----------CCCCCccCCCCcc
Confidence 8999763 8999 899999999864566 467989888882 8899999877653
No 41
>3bod_A Neurexin-1-alpha; neurexin1D, LNS6, alternative splicing, calcium, cell adhesion, EGF-like domain, glycoprotein, membrane, metal- binding; 1.70A {Mus musculus} PDB: 2vh8_C 2xb6_C* 2wqz_C* 1c4r_A 3bop_A 3mw4_A*
Probab=99.68 E-value=3.1e-16 Score=156.46 Aligned_cols=80 Identities=15% Similarity=0.237 Sum_probs=67.6
Q ss_pred ceeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeEE
Q psy9685 292 NIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLI 371 (979)
Q Consensus 292 ~~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V 371 (979)
...+|+|+|||++++|+|||.+... ...||++|+|.+|+|.+++++|++...+..+...++||+||+|
T Consensus 29 ~~~~isl~FrT~~~~GlLl~~~~~~------------~~~dfi~l~L~~G~l~~~~~~G~~~~~~~~~~~~vnDg~WH~V 96 (178)
T 3bod_A 29 RADRLAIGFSTVQKEAVLVRVDSSS------------GLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVV 96 (178)
T ss_dssp SEEEEEEEEECCCSSEEEEEEEESS------------SSCCEEEEEEETTEEEEEEESSSCCEEEECCSSCCCSSSCEEE
T ss_pred cccEEEEEEEECCCCEEEEEEcCCC------------CCCCEEEEEEECCEEEEEEECCCCceEEecCCcCccCCCeEEE
Confidence 4578999999999999999974210 1569999999999999999999988766656788999999999
Q ss_pred EEEeecceeeeE
Q psy9685 372 QTISSTGILDVQ 383 (979)
Q Consensus 372 ~~~~~~~~l~l~ 383 (979)
.+.+.++.+.|.
T Consensus 97 ~v~r~~~~~~L~ 108 (178)
T 3bod_A 97 RFTRSGGNATLQ 108 (178)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEeCCEEEEE
Confidence 999998876553
No 42
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.66 E-value=1e-19 Score=187.06 Aligned_cols=217 Identities=11% Similarity=0.048 Sum_probs=154.2
Q ss_pred eeccCCCceeeecCCC---CCCCccccccccCCCCCCCCCCEEeeCCCCcEEecCCCcccCccccccccc------cCCC
Q psy9685 615 RCIDGVARYSCECTPG---WEGALCEKEIDECLSNPCMNGGQCEDRLAGFVCNCSEEYVGERCESLRQIS------CADQ 685 (979)
Q Consensus 615 ~C~~~~g~~~C~C~~G---~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~------c~~~ 685 (979)
.+.+.||.+.|.|.+| +.|.+++..+..+.. +|.++|+|++..++|.|.|++||+|.+|+.. ... |...
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~-~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~n-i~ec~~~~~c~s~ 82 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGARDKQNVVALDI-KSDDGGKTLKGTMTYNGEGPIGFRGTLSSAN-NYTVENQWGGTSA 82 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEE-ECSSTTSEEEEEEEETTSCCEEEEEEECSTT-EEEEEEESSSTTS
T ss_pred eEeecCCcccCCcCCCCceeeccccccccccCCC-CcCCCCeecCCCCCeEEeCCCCccccccccc-ccccccccCcCCC
Confidence 4556788888999888 678888877766544 7889999999999999999999999999753 333 5556
Q ss_pred CCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCcccccccc
Q psy9685 686 PCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRL 765 (979)
Q Consensus 686 ~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~ 765 (979)
||.++++| |.|..|+ +.++|.+.||.++|+|++..++|+|.|++||+|..|.-.-
T Consensus 83 pC~nggtc--------------------~~G~~c~-~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~---- 137 (267)
T 4fbr_A 83 PWQPGGVW--------------------VLGARDK-QNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDT---- 137 (267)
T ss_dssp CEEEEEEE--------------------ECCCCSS-CCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCE----
T ss_pred cccCCCee--------------------eccCccc-cccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCc----
Confidence 66655544 4567776 5679999999999999999999999999999998764100
Q ss_pred CCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCC
Q psy9685 766 GDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQP 845 (979)
Q Consensus 766 ~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~ 845 (979)
. +|.....+.. .....+...+.|.+|+++++.+ ...|.++|+|++..
T Consensus 138 ------------------d---~C~n~~~c~s---------~pC~ngg~c~~G~~c~~~i~c~---~~~c~ngg~C~dg~ 184 (267)
T 4fbr_A 138 ------------------Y---SVENQWGGSA---------APWHSGGVWVLGTRGKQNVINV---DAKSNDGGKTLSGT 184 (267)
T ss_dssp ------------------E---EEEEECSSTT---------SCCEEEEEEECCSSTTSCEEEE---EEECSSTTSEEEEE
T ss_pred ------------------c---cccccCCcCC---------ccccCCcceecccccccccccC---CCCCCCCCEeeCCC
Confidence 0 0000000000 0011222356799998777654 35799999999999
Q ss_pred CCeeecCCCCCCCCCCCC-CCC------CCCCCCCCCCeeecCCCCCCCeEeecCCCCCCCCC
Q psy9685 846 GDYKCACQFDTCGYLCNF-PDP------CKDEPCQNGGTCHEDCRHQADYKCDCLPGWTGKNC 901 (979)
Q Consensus 846 gs~~C~C~~g~~G~~C~~-~~~------C~~~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C 901 (979)
++|+|.|++||.|..|+. +++ |...+|.+++.+ .|.|..++.+..|
T Consensus 185 ~~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~----------~~~C~~g~n~~~c 237 (267)
T 4fbr_A 185 MTYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFW----------MIGARNGQNVVAL 237 (267)
T ss_dssp EEETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEE----------ECCCCTTCCEEEE
T ss_pred CCeEEeCCCCccccccccccceeccCCCccCCcccCCCeE----------EEecCCCCccccC
Confidence 999999999999999986 444 344455554443 3445666554444
No 43
>2r1b_A Neurexin-1-beta, neurexin I-beta; beta-sandwich, cell adhesion, splicing; 1.72A {Rattus norvegicus} PDB: 3mw2_A* 3b3q_E* 3mw3_A*
Probab=99.66 E-value=1.3e-15 Score=157.03 Aligned_cols=79 Identities=15% Similarity=0.239 Sum_probs=66.9
Q ss_pred eeEEEEEEEeccCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCceeeecCeeecCCCeeEEE
Q psy9685 293 IVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQ 372 (979)
Q Consensus 293 ~~~is~~frT~~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V~ 372 (979)
..+|+|+|||++++|||||.+... ...|||+|+|.+|+|++++++|++...+..+...|+||+||+|.
T Consensus 36 ~~~isl~FrT~~~~GlLly~~~~~------------~~~dfi~LeL~~G~l~~~~~~G~~~~~~~~~~~~vnDG~WH~V~ 103 (220)
T 2r1b_A 36 ADRLAIGFSTVQKEAVLVRVDSSS------------GLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVR 103 (220)
T ss_dssp EEEEEEEEECCCSSEEEEEEEEST------------TCCCEEEEEEETTEEEEEEESSSSCEEEECTTCCCCSSSCEEEE
T ss_pred CcEEEEEEEeCCCCEEEEEecCCC------------CCCCeEEEEEECCEEEEEEECCCCceEEEeCceEecCCceEEEE
Confidence 458999999999999999965321 14699999999999999999999887666556789999999999
Q ss_pred EEeecceeeeE
Q psy9685 373 TISSTGILDVQ 383 (979)
Q Consensus 373 ~~~~~~~l~l~ 383 (979)
+.+.++.+.|.
T Consensus 104 v~r~~~~~~L~ 114 (220)
T 2r1b_A 104 FTRSGGNATLQ 114 (220)
T ss_dssp EEEETTEEEEE
T ss_pred EEEeCCEEEEE
Confidence 99999876554
No 44
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.64 E-value=6.5e-17 Score=159.48 Aligned_cols=150 Identities=24% Similarity=0.649 Sum_probs=114.3
Q ss_pred CCCCceEECCCCccCCCCCCCCCCCCCC-CCCCCCeeccCCCceeeecCCCCCCCccccccccCCCCCCC-CCCEEeeCC
Q psy9685 581 PLTSYACKCPAGYSSETCAVDIDECVTH-NCQNGARCIDGVARYSCECTPGWEGALCEKEIDECLSNPCM-NGGQCEDRL 658 (979)
Q Consensus 581 ~~~~~~C~C~~G~~g~~C~~~~~~C~~~-~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~-~~g~C~~~~ 658 (979)
....+.|.|++||.|..|+ ..|... .|..++.|.. ...|.|.+||+|..|+. +.|.. .|. .+|.|++
T Consensus 13 ~~~~~~c~C~~g~~G~~C~---~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~~C~~--~~C~~-~C~~~~g~C~~-- 81 (169)
T 2vj2_A 13 IEGRSAVTCDDYYYGFGCN---KFCRPRDDFFGHYACDQ---NGNKTCMEGWMGPECNR--AICRQ-GCSPKHGSCKL-- 81 (169)
T ss_dssp --------CCTTEETTTTC---EECCCEEETTEEEEECS---SCCEEECTTEESTTSCE--ECCCT-TCCTTTEECSS--
T ss_pred cccCeeeeCCCcCcCCCcc---cccCCCCCcCCCCEeCC---CCeeECCCCCcCCCCCC--CCCCC-CCCCCCcccCC--
Confidence 4567889999999999997 346543 4777788864 34699999999999974 34653 465 5678865
Q ss_pred CCcEEecCCCcccCccccccccccCCCC-CCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCC-CCCCCCce
Q psy9685 659 AGFVCNCSEEYVGERCESLRQISCADQP-CYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECAS-GPCKNSGQ 736 (979)
Q Consensus 659 ~~~~C~C~~G~~G~~C~~~~~~~c~~~~-C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~-~~C~~~g~ 736 (979)
.+.|.|++||+|..|+. |...+ |.+ ++|. +.++|.|++||+|..|+.++++|.. .+|.++++
T Consensus 82 -~~~C~C~~G~~G~~C~~-----C~~~~~C~~-g~C~---------~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~ 145 (169)
T 2vj2_A 82 -PGDCRCQYGWQGLYCDK-----CIPHPGCVH-GICN---------EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGT 145 (169)
T ss_dssp -TTCCEECTTEESSSSCE-----ECCCTTCSS-EECS---------STTCCEECTTEETTTTCEESCHHHHTCCCCTTCE
T ss_pred -CCeeECCCCCCCCCccc-----CCCCCCCCC-CCcC---------CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCE
Confidence 57999999999999973 44444 664 4776 2468999999999999888999985 78999999
Q ss_pred EecC-CCCeEEecCCCCcCCCC
Q psy9685 737 CIDD-VNAFICNCTNTATGASM 757 (979)
Q Consensus 737 C~~~-~g~~~C~C~~g~~g~~~ 757 (979)
|++. .++|+|.|++||+|..|
T Consensus 146 C~~~~~~~~~C~C~~G~~G~~C 167 (169)
T 2vj2_A 146 CSNTGPDKYQCSCPEGYSGPNC 167 (169)
T ss_dssp EEECSTTCEEEECCTTCCSTTS
T ss_pred EcCCCCCCcEeECCCCCcCcCc
Confidence 9996 89999999999999875
No 45
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.64 E-value=3.5e-16 Score=184.86 Aligned_cols=134 Identities=31% Similarity=0.720 Sum_probs=108.7
Q ss_pred CCCCCCCCCCCeeccCCCcee---eecCCCCCCCcccccc--------ccCCCC----CCCCCCEEeeCCCCcEEecC--
Q psy9685 604 ECVTHNCQNGARCIDGVARYS---CECTPGWEGALCEKEI--------DECLSN----PCMNGGQCEDRLAGFVCNCS-- 666 (979)
Q Consensus 604 ~C~~~~C~~~~~C~~~~g~~~---C~C~~G~~G~~C~~~~--------~~C~~~----~C~~~g~C~~~~~~~~C~C~-- 666 (979)
+|...||.+++.|.+..|.+. |.|.+||.|..|+.+. ++|... +|.++|+|+. +.|.|.
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~ 511 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSS 511 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCC
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecC
Confidence 577888999999987788887 9999999999998765 668753 4999999984 489999
Q ss_pred --CCcccCccccccccccCC---CCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCcc--ccCCCCCC---CCCCCCce
Q psy9685 667 --EEYVGERCESLRQISCAD---QPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCE--INIDECAS---GPCKNSGQ 736 (979)
Q Consensus 667 --~G~~G~~C~~~~~~~c~~---~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~--~~~~~C~~---~~C~~~g~ 736 (979)
+||+|..|+.. ...|.. .+|.++|.|.+ ++|.|.+||+|..|+ .++++|.. .+|.++|+
T Consensus 512 ~~~Gy~G~~Ce~~-~~~C~~~~~~~C~~~G~C~~----------g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~ 580 (690)
T 3fcs_B 512 DFGKITGKYCECD-DFSCVRYKGEMCSGHGQCSC----------GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGK 580 (690)
T ss_dssp SSCCCBSTTSCBC-SSCCCBSSSSBGGGSEEEET----------TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCE
T ss_pred CCCCeeCCCcCcc-cCcCcCCCCCCCCCCCEecC----------CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCE
Confidence 99999999852 234554 46888899975 489999999999998 56889986 57999999
Q ss_pred EecCCCCeEEec-CCCCcCCC
Q psy9685 737 CIDDVNAFICNC-TNTATGAS 756 (979)
Q Consensus 737 C~~~~g~~~C~C-~~g~~g~~ 756 (979)
|++. +|.| ++||+|..
T Consensus 581 C~~g----~C~C~~~Gy~G~~ 597 (690)
T 3fcs_B 581 CECG----SCVCIQPGSYGDT 597 (690)
T ss_dssp EETT----EEECCSTTCBSTT
T ss_pred EeCC----EEECCCCCccCCC
Confidence 9763 8888 77666554
No 46
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.64 E-value=8.2e-17 Score=158.77 Aligned_cols=77 Identities=22% Similarity=0.513 Sum_probs=36.3
Q ss_pred cEEecCCCcccCccccccccccCC-CCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCCCCCC-CCceEe
Q psy9685 661 FVCNCSEEYVGERCESLRQISCAD-QPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECASGPCK-NSGQCI 738 (979)
Q Consensus 661 ~~C~C~~G~~G~~C~~~~~~~c~~-~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~-~~g~C~ 738 (979)
+.|.|++||+|..|+. .|.. ..|..+++|.. .++|.|.+||+|..|+. +.|.. .|. .+|.|+
T Consensus 17 ~~c~C~~g~~G~~C~~----~C~~~~~c~~~g~C~~---------~g~C~C~~G~~G~~C~~--~~C~~-~C~~~~g~C~ 80 (169)
T 2vj2_A 17 SAVTCDDYYYGFGCNK----FCRPRDDFFGHYACDQ---------NGNKTCMEGWMGPECNR--AICRQ-GCSPKHGSCK 80 (169)
T ss_dssp ----CCTTEETTTTCE----ECCCEEETTEEEEECS---------SCCEEECTTEESTTSCE--ECCCT-TCCTTTEECS
T ss_pred eeeeCCCcCcCCCccc----ccCCCCCcCCCCEeCC---------CCeeECCCCCcCCCCCC--CCCCC-CCCCCCcccC
Confidence 4566666666666553 1222 13444555532 12566666666666652 33443 244 445554
Q ss_pred cCCCCeEEecCCCCcCCC
Q psy9685 739 DDVNAFICNCTNTATGAS 756 (979)
Q Consensus 739 ~~~g~~~C~C~~g~~g~~ 756 (979)
+ .++|.|++||+|..
T Consensus 81 ~---~~~C~C~~G~~G~~ 95 (169)
T 2vj2_A 81 L---PGDCRCQYGWQGLY 95 (169)
T ss_dssp S---TTCCEECTTEESSS
T ss_pred C---CCeeECCCCCCCCC
Confidence 3 34566655555443
No 47
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.62 E-value=5.1e-16 Score=149.35 Aligned_cols=79 Identities=34% Similarity=0.801 Sum_probs=64.6
Q ss_pred cccCCCCCCCCceecCCCCC-CCCCCCCeecCCCCCCCCCccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCc
Q psy9685 680 ISCADQPCYFGAVCQDTKIS-PYFPQGPICDCPPGYRGSRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMG 758 (979)
Q Consensus 680 ~~c~~~~C~~~~~C~~~~~~-~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~ 758 (979)
..|...+|.++++|...... ....++|+|.|++||+|..|+.++++|...+|.++++|++..++|+|.|++||+|..+.
T Consensus 53 ~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 53 GPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp CTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSC
T ss_pred CcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCce
Confidence 34666778888888732100 00146789999999999999889999999999999999999999999999999998865
No 48
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.62 E-value=6e-16 Score=148.84 Aligned_cols=125 Identities=30% Similarity=0.714 Sum_probs=96.7
Q ss_pred CCCCCCCCCCCceEecCC--CCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCC
Q psy9685 724 DECASGPCKNSGQCIDDV--NAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGL 801 (979)
Q Consensus 724 ~~C~~~~C~~~g~C~~~~--g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~ 801 (979)
|+|...||.++++|++.. ++|+|.|++||+|..|.-.. .+
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~-----------------------~~--------------- 42 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVV-----------------------EV--------------- 42 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCC-----------------------CC---------------
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCc-----------------------cc---------------
Confidence 578889999999999865 68999999999987653100 00
Q ss_pred CCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeec-------cCCCCeeecCCCCCCCCCCC-CCCCCCCCCCC
Q psy9685 802 ADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECI-------NQPGDYKCACQFDTCGYLCN-FPDPCKDEPCQ 873 (979)
Q Consensus 802 ~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~-------~~~gs~~C~C~~g~~G~~C~-~~~~C~~~~C~ 873 (979)
......|. ++++|. ...|.++++|+ +..++|.|.|++||.|..|+ ++++|...+|.
T Consensus 43 -------------~~~~~~c~-~~~~C~--~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C~~~~C~ 106 (143)
T 4d90_A 43 -------------ASDEEEPT-SAGPCT--PNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINECEVEPCK 106 (143)
T ss_dssp -------------TTTTTSCC-CCCTTS--SCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTTTTCCSC
T ss_pred -------------cccccccc-cCCcCC--CCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcCCCCCCC
Confidence 00112232 567885 46799999999 67789999999999999998 89999999999
Q ss_pred CCCeeecCCCCCCCeEeecCCCCCCCCCCcCC
Q psy9685 874 NGGTCHEDCRHQADYKCDCLPGWTGKNCTEVP 905 (979)
Q Consensus 874 ~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~~~ 905 (979)
++++|. +..++|+|.|++||+|++|+...
T Consensus 107 ~~~~C~---~~~g~~~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 107 NGGICT---DLVANYSCECPGEFMGRNCQYKG 135 (143)
T ss_dssp TTCEEE---EETTEEEEECCTTCBSTTSCBC-
T ss_pred CCCEeE---CCCCCeEeECCCCCccCCceecC
Confidence 999999 45789999999999999998754
No 49
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.59 E-value=1.1e-15 Score=179.76 Aligned_cols=151 Identities=26% Similarity=0.533 Sum_probs=110.5
Q ss_pred CCCCCCCCCEEeeCCCCcEEecCCCcccCccccccc--------cccCCC----CCCCCceecCCCCCCCCCCCCeecCC
Q psy9685 644 LSNPCMNGGQCEDRLAGFVCNCSEEYVGERCESLRQ--------ISCADQ----PCYFGAVCQDTKISPYFPQGPICDCP 711 (979)
Q Consensus 644 ~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~--------~~c~~~----~C~~~~~C~~~~~~~~~~~~~~C~C~ 711 (979)
...+|.++|.|... .|.|.+||+|..|+.... ..|... +|.++|.|... +|.|.
T Consensus 433 ~s~~Cs~~G~C~~g----~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----------~C~C~ 498 (687)
T 3k6s_B 433 DRSLCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----------QCLCH 498 (687)
T ss_dssp CSSTGGGSEEESSS----SEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----------EEEEC
T ss_pred CCCCCCCCCEEeCC----EeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----------EEEcC
Confidence 34568888888732 799999999999984221 135443 48888999743 89999
Q ss_pred ------CCCCCCCccccCCCCCC---CCCCC--CceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCC
Q psy9685 712 ------PGYRGSRCEINIDECAS---GPCKN--SGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGY 780 (979)
Q Consensus 712 ------~G~~G~~C~~~~~~C~~---~~C~~--~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~ 780 (979)
+||+|..|+.+.+.|.. .+|.+ +|+|.+. +|.|++||+|..|.|.
T Consensus 499 ~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Cec~-------------------- 554 (687)
T 3k6s_B 499 TSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCE-------------------- 554 (687)
T ss_dssp CCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETT----EEEECTTCCSTTSCSC--------------------
T ss_pred CCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCccC--------------------
Confidence 99999999988889974 36988 8999853 8999998888775421
Q ss_pred cCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCccccc-CCCCCCCCeeeccCCCCeeecCCCCCCCC
Q psy9685 781 TDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECEL-SSDMCGNNGECINQPGDYKCACQFDTCGY 859 (979)
Q Consensus 781 ~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~-~~~~C~~~g~C~~~~gs~~C~C~~g~~G~ 859 (979)
.+.+.|.. ....|.++|+|+. ++|.|.+||.|.
T Consensus 555 ------------------------------------------~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~ 588 (687)
T 3k6s_B 555 ------------------------------------------RTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQLP 588 (687)
T ss_dssp ------------------------------------------CSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCCTT
T ss_pred ------------------------------------------CCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCcCC
Confidence 12234432 1246778888876 378999999999
Q ss_pred CCCCCCCCCCCCCCCCCeee
Q psy9685 860 LCNFPDPCKDEPCQNGGTCH 879 (979)
Q Consensus 860 ~C~~~~~C~~~~C~~~g~C~ 879 (979)
.|+....|. .+|.+++.|.
T Consensus 589 ~Ce~c~~C~-~~C~~~g~Cv 607 (687)
T 3k6s_B 589 LCQECPGCP-SPCGKYISCA 607 (687)
T ss_dssp TTCCCTTSC-CCCTTTHHHH
T ss_pred CCCCCCCCC-cccCCCCCCC
Confidence 998755674 5788888887
No 50
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.53 E-value=5.6e-15 Score=166.57 Aligned_cols=202 Identities=21% Similarity=0.441 Sum_probs=126.5
Q ss_pred CCceEECCCCccCCCCCCCCCCCCCCCCCCCCee----cc-------CCCceeeecCCCCCCCccccccccCCCCCCCCC
Q psy9685 583 TSYACKCPAGYSSETCAVDIDECVTHNCQNGARC----ID-------GVARYSCECTPGWEGALCEKEIDECLSNPCMNG 651 (979)
Q Consensus 583 ~~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C----~~-------~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~ 651 (979)
++|.|.|+.++.+..++.....+. +.+.+.+ .. ......|.|.+||+|..|+. .| .+|.++
T Consensus 137 Gs~~~~~p~~~~~~~~~~~~~~~~---~~d~g~y~~~~~~g~~~~~~~~~~~~c~C~~g~~G~~C~~---~C--~~C~~~ 208 (423)
T 2gy5_A 137 GSFIHSVPRHEVPDILEVHLPHAQ---PQDAGVYSARYIGGNLFTSAFTRLIVRRCEAQKWGPECNH---LC--TACMNN 208 (423)
T ss_dssp TEEEEEECGGGCCSEEEEEETTCC---GGGCEEEEEEETTCCGGGCEEEEEEECSSCTTEESTTSCE---EC--CCCCTT
T ss_pred CeEeeccCccccCCeEEeccCcCC---CCCCCeEeeEECCCcEeccccccccCCcCCCCCCCCCCCC---CC--CCCCCC
Confidence 467788888877775543222221 1111111 10 01123577788888777763 24 267777
Q ss_pred CEEeeCCCCcEEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCC-CCC
Q psy9685 652 GQCEDRLAGFVCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECA-SGP 730 (979)
Q Consensus 652 g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~-~~~ 730 (979)
|+|.+ +.+.|.|++||+|..|+.. |.+||.|..|. ++|. .++
T Consensus 209 G~C~~--~~g~C~C~~G~~G~~Ce~~--------------------------------C~~g~~g~~C~---~~C~~~~~ 251 (423)
T 2gy5_A 209 GVCHE--DTGECICPPGFMGRTCEKA--------------------------------CELHTFGRTCK---ERCSGQEG 251 (423)
T ss_dssp CEECT--TTCCEECCTTEESTTSCEE--------------------------------CCTTEESTTSC---EECCSTTT
T ss_pred CEEEC--CCCcEeCCCCccCCCcccc--------------------------------cCCCCCCCCcC---ccCCCCCC
Confidence 77765 3457888888877777631 44556666664 2565 356
Q ss_pred CCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccc
Q psy9685 731 CKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQT 810 (979)
Q Consensus 731 C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C 810 (979)
|.+++.|. .++|+|.|++||+|..|. -
T Consensus 252 C~~~g~C~--~~~~~C~C~~G~~G~~C~---------------------------------------------------~ 278 (423)
T 2gy5_A 252 CKSYVFCL--PDPYGCSCATGWKGLQCN---------------------------------------------------E 278 (423)
T ss_dssp TTTCCEEE--TTTTEEECCBTCBSGGGC---------------------------------------------------B
T ss_pred CCCCCEEC--CCCCeEEeCCCccccccc---------------------------------------------------C
Confidence 88888995 467899999999987642 0
Q ss_pred cCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCCCCCeEe
Q psy9685 811 TPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCNFPDPCKDEPCQNGGTCHEDCRHQADYKC 890 (979)
Q Consensus 811 ~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~C~~~c~~~~~~~C 890 (979)
.|.+||.|..|+. .| .|.++|+|.+.. .|.|++||.|..|+....... . ..+. .....|
T Consensus 279 ~C~~G~~G~~C~~---~C-----~C~ngg~C~~~~---~C~C~~G~~G~~Ce~~~~~~~----~-~~~~-----~~~~~~ 337 (423)
T 2gy5_A 279 ACHPGFYGPDCKL---RC-----SCNNGEMCDRFQ---GCLCSPGWQGLQCEREGIPRM----T-PKIV-----DLPDHI 337 (423)
T ss_dssp CCCTTBCSBTTCC---BC-----CCTTCCEEETTT---EEECCTTCBSTTSCBCSSCCC----C-CEEC-----SCCSBC
T ss_pred ccCCCCcCCcccc---cc-----cCCCCCEecCCC---ceECCCCCcCCCCccCccCCc----C-ccee-----cCCCeE
Confidence 3566899988863 34 488889998765 399999999999985311111 1 1111 123458
Q ss_pred ecCCCCCCCCCCc
Q psy9685 891 DCLPGWTGKNCTE 903 (979)
Q Consensus 891 ~C~~G~~G~~C~~ 903 (979)
.|.+||.|..|+.
T Consensus 338 ~c~~g~~g~~C~~ 350 (423)
T 2gy5_A 338 EVNSGKFNPICKA 350 (423)
T ss_dssp CEESEEECCEEEE
T ss_pred EeCCCccCCcccc
Confidence 8888888877753
No 51
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.52 E-value=1.1e-14 Score=169.38 Aligned_cols=133 Identities=31% Similarity=0.687 Sum_probs=107.0
Q ss_pred ccCCCCCCCCceecCCCCCCCCCCCCee-cCCCCCCC--CCccccCCCCCCCC--CCCCc---eEecCCCCeEEe-cCCC
Q psy9685 681 SCADQPCYFGAVCQDTKISPYFPQGPIC-DCPPGYRG--SRCEINIDECASGP--CKNSG---QCIDDVNAFICN-CTNT 751 (979)
Q Consensus 681 ~c~~~~C~~~~~C~~~~~~~~~~~~~~C-~C~~G~~G--~~C~~~~~~C~~~~--C~~~g---~C~~~~g~~~C~-C~~g 751 (979)
.|...+|.++++|.+.. .++|+| .|++||+| ..|+ ++++|...+ |.+++ +|+++.++|+|. |++|
T Consensus 5 eC~~nPC~~gg~C~n~~-----~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~G 78 (634)
T 1yo8_A 5 GCLSNPCFPGAQCSSFP-----DGSWSCGFCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPR 78 (634)
T ss_dssp GGGGCCSCTTCCEEECT-----TSCEEECCCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTT
T ss_pred ccCCCCCCCCCEEecCC-----CCCeECCcCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCC
Confidence 46677888888998763 234899 99999998 7997 899999887 99988 999999999999 9999
Q ss_pred CcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccC
Q psy9685 752 ATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELS 831 (979)
Q Consensus 752 ~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~ 831 (979)
|+|..+.+..... ....+..|+ ++++|...
T Consensus 79 y~G~~c~g~g~~~-------------------------------------------------~~~dg~~C~-dideC~~~ 108 (634)
T 1yo8_A 79 YRGNQPVGVGLEA-------------------------------------------------AKTEKQVCE-PENPCKDK 108 (634)
T ss_dssp EEECCCEESSSHH-------------------------------------------------HHSCCCCEE-ECCTTTTT
T ss_pred cccCccccccccc-------------------------------------------------cccCCCccc-ccccccCC
Confidence 9998754211000 012356675 79999876
Q ss_pred CCCCCCCeeeccCC----CCeeecCCCCCCC--CCCC---CCCCCCC
Q psy9685 832 SDMCGNNGECINQP----GDYKCACQFDTCG--YLCN---FPDPCKD 869 (979)
Q Consensus 832 ~~~C~~~g~C~~~~----gs~~C~C~~g~~G--~~C~---~~~~C~~ 869 (979)
...|.++++|++.. ++|+|.|++||.| ..|+ ++++|..
T Consensus 109 ~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~ 155 (634)
T 1yo8_A 109 THNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPN 155 (634)
T ss_dssp CCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCS
T ss_pred CcccccCccccccccccccceeeeccCCccccCcccccccCcccccC
Confidence 67899999999998 9999999999987 7897 6888863
No 52
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.51 E-value=4.3e-14 Score=164.38 Aligned_cols=110 Identities=35% Similarity=0.804 Sum_probs=87.6
Q ss_pred ccccCCCCCCCCCCEEeeCCCC-cEE-ecCCCccc--CccccccccccCCCC--CCCCc---eecCCCCCCCCCCCCeec
Q psy9685 639 EIDECLSNPCMNGGQCEDRLAG-FVC-NCSEEYVG--ERCESLRQISCADQP--CYFGA---VCQDTKISPYFPQGPICD 709 (979)
Q Consensus 639 ~~~~C~~~~C~~~g~C~~~~~~-~~C-~C~~G~~G--~~C~~~~~~~c~~~~--C~~~~---~C~~~~~~~~~~~~~~C~ 709 (979)
++++|..+||.++++|++..++ |+| .|++||+| ..|+.. .+|...+ |.+++ +|.+. .++|+|.
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDi--DEC~~~p~~C~~gg~~~~CvNt------~gsY~C~ 73 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDL--DECALVPDICFSTSKVPRCVNT------QPGFHCL 73 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBC--CTTTTSCCCSCCCSSSCCEEEC------SSSEEEC
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcccc--ccccCCCCcccCCccccceeec------cCceecc
Confidence 4577877888888888887754 888 88888887 678743 4466555 88877 88876 5789998
Q ss_pred -CCCCCCCCCcc--------------ccCCCCCC--CCCCCCceEecCC----CCeEEecCCCCcCCC
Q psy9685 710 -CPPGYRGSRCE--------------INIDECAS--GPCKNSGQCIDDV----NAFICNCTNTATGAS 756 (979)
Q Consensus 710 -C~~G~~G~~C~--------------~~~~~C~~--~~C~~~g~C~~~~----g~~~C~C~~g~~g~~ 756 (979)
|++||+|..|+ .++++|.. ++|.++++|++.. ++|+|.|++||+|..
T Consensus 74 ~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG 141 (634)
T 1yo8_A 74 PCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDG 141 (634)
T ss_dssp CCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESS
T ss_pred cCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccC
Confidence 99999988753 47899985 5899999999998 999999999998754
No 53
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.49 E-value=3.4e-14 Score=136.31 Aligned_cols=114 Identities=24% Similarity=0.604 Sum_probs=93.6
Q ss_pred CCCCCCceecCCCCCCCCCCCCeecCCCCCCC---------CCccccCCCCCCC---CCCCCceEecCCCCeEEecCCCC
Q psy9685 685 QPCYFGAVCQDTKISPYFPQGPICDCPPGYRG---------SRCEINIDECASG---PCKNSGQCIDDVNAFICNCTNTA 752 (979)
Q Consensus 685 ~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G---------~~C~~~~~~C~~~---~C~~~g~C~~~~g~~~C~C~~g~ 752 (979)
.+|.++++|++. ++|.|++||+| ..|+ ++++|... +|.++++|++..++|+|.|++||
T Consensus 7 ~~C~~~~~C~~~---------~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy 76 (143)
T 2bou_A 7 RWCPQDSSCVNA---------TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY 76 (143)
T ss_dssp TTCCTTEEESSS---------SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTE
T ss_pred CcCCCCCEEcCC---------CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc
Confidence 568888999753 68999999998 5785 89999875 89999999999999999999999
Q ss_pred cCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccCC
Q psy9685 753 TGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELSS 832 (979)
Q Consensus 753 ~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~ 832 (979)
+|..+.- . + ....+..|+ |+|||....
T Consensus 77 ~g~~~~~-------------------~------~---------------------------~~~~~~~C~-dideC~~~~ 103 (143)
T 2bou_A 77 EPVSGAK-------------------T------F---------------------------KNESENTCQ-DVDECSSGQ 103 (143)
T ss_dssp EETTCCS-------------------C------B---------------------------SSGGGCCEE-ECCHHHHTC
T ss_pred ccCcCcc-------------------c------c---------------------------ccCCCCCcC-CccCccCcC
Confidence 9875320 0 0 023466786 899998666
Q ss_pred CCCCCCeeeccCCCCeeecCCCCCCCCCC
Q psy9685 833 DMCGNNGECINQPGDYKCACQFDTCGYLC 861 (979)
Q Consensus 833 ~~C~~~g~C~~~~gs~~C~C~~g~~G~~C 861 (979)
..|.++++|++.+|+|+|.|++||.|..+
T Consensus 104 ~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 104 HQCDSSTVCFNTVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp CCCCTTSEEEECSSCEEEECCSSSCBCTT
T ss_pred CCCCCCCEEECCCCCEEeeCCCCcccCCC
Confidence 88999999999999999999999988764
No 54
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.48 E-value=3.6e-14 Score=166.57 Aligned_cols=89 Identities=26% Similarity=0.534 Sum_probs=31.1
Q ss_pred cCCCCcCCCCccccCcccccCCCCCCCCeeeccC----CCCeeecCCCCCCCCCCCC-----------CCCCCCCCCCCC
Q psy9685 811 TPILGYTGEMCEIDINECELSSDMCGNNGECINQ----PGDYKCACQFDTCGYLCNF-----------PDPCKDEPCQNG 875 (979)
Q Consensus 811 ~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~----~gs~~C~C~~g~~G~~C~~-----------~~~C~~~~C~~~ 875 (979)
.|.+||.|..|+ ..+.|.. ..|.++|+|.+. ..+++|.|++||.|..|+. .+.|...+|.++
T Consensus 422 ~C~~Gy~G~~c~-~~~~C~~--C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~ 498 (525)
T 4aqs_A 422 VCKEGFYDLSAE-DPYGCKS--CACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLG 498 (525)
T ss_dssp EECTTEECCCTT-STTSSEE--CCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC-----------------------
T ss_pred CCCCCCcCCCCC-CCCCCcc--CCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCC
Confidence 466788887775 4445542 235444444322 2345899999999999962 466887889999
Q ss_pred CeeecCCCCCCCeEeecCCCCCCCCCCc
Q psy9685 876 GTCHEDCRHQADYKCDCLPGWTGKNCTE 903 (979)
Q Consensus 876 g~C~~~c~~~~~~~C~C~~G~~G~~C~~ 903 (979)
|.|...|+. .+++|.|.+||+|.+|++
T Consensus 499 gs~~~~C~~-~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 499 GALNNSCSE-DSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ----------------------------
T ss_pred CccCCccCC-CCCeeECCCCCcCCCCCC
Confidence 888866643 456899999999999974
No 55
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.46 E-value=5.7e-14 Score=165.37 Aligned_cols=127 Identities=27% Similarity=0.623 Sum_probs=93.9
Q ss_pred CCCCCCCCCeeccCCCceeeecCCCCCCCccccccc---------cCCCC----CCCCCCEEeeCCCCcEEecC------
Q psy9685 606 VTHNCQNGARCIDGVARYSCECTPGWEGALCEKEID---------ECLSN----PCMNGGQCEDRLAGFVCNCS------ 666 (979)
Q Consensus 606 ~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~---------~C~~~----~C~~~g~C~~~~~~~~C~C~------ 666 (979)
...+|.++|.|.. ..|.|.+||.|..|+.+.+ .|... +|.++|.|... .|.|.
T Consensus 433 ~s~~Cs~~G~C~~----g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G----~C~C~~~~~~~ 504 (687)
T 3k6s_B 433 DRSLCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDVPG 504 (687)
T ss_dssp CSSTGGGSEEESS----SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETT----EEEECCCCSTT
T ss_pred CCCCCCCCCEEeC----CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCC----EEEcCCCCCCC
Confidence 4567888889973 3699999999999985443 47643 49999999843 99999
Q ss_pred CCcccCccccccccccC---CCCCCC--CceecCCCCCCCCCCCCeecCCCCCCCCCcc--ccCCCCCCC---CCCCCce
Q psy9685 667 EEYVGERCESLRQISCA---DQPCYF--GAVCQDTKISPYFPQGPICDCPPGYRGSRCE--INIDECASG---PCKNSGQ 736 (979)
Q Consensus 667 ~G~~G~~C~~~~~~~c~---~~~C~~--~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~--~~~~~C~~~---~C~~~g~ 736 (979)
+||+|..|+.. ...|. ..+|.+ +|.|... +|.|.+||+|..|+ .+++.|... +|.++|+
T Consensus 505 ~G~~G~~Ce~~-~~~C~~~~~~~C~~~~~G~C~~g----------~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~ 573 (687)
T 3k6s_B 505 KLIYGQYCECD-TINCERYNGQVCGGPGRGLCFCG----------KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGR 573 (687)
T ss_dssp CCEESTTSCEE-SSCSCEETTEETSHHHHEEEETT----------EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCC
T ss_pred CCccccccccc-cccccCCCCcCcCCCCCCeEECC----------EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCc
Confidence 99999999842 23454 245877 8888743 89999999999998 335778754 6888887
Q ss_pred EecCCCCeEEecCCCCcCC
Q psy9685 737 CIDDVNAFICNCTNTATGA 755 (979)
Q Consensus 737 C~~~~g~~~C~C~~g~~g~ 755 (979)
|.+ .+|.|.+||+|.
T Consensus 574 C~~----g~C~C~~Gy~G~ 588 (687)
T 3k6s_B 574 CRC----NVCECHSGYQLP 588 (687)
T ss_dssp BCS----SCBCCSTTCCTT
T ss_pred CCC----CEEECCCCCcCC
Confidence 765 256666544443
No 56
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.40 E-value=1.9e-14 Score=141.14 Aligned_cols=132 Identities=28% Similarity=0.728 Sum_probs=99.0
Q ss_pred CCCCCCC-CCCCCCCeeccCCCceeeecCCCCC----CCcccccccc--CCCC--CC--CCCCEEeeCCC----CcEEec
Q psy9685 601 DIDECVT-HNCQNGARCIDGVARYSCECTPGWE----GALCEKEIDE--CLSN--PC--MNGGQCEDRLA----GFVCNC 665 (979)
Q Consensus 601 ~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~~~~~~--C~~~--~C--~~~g~C~~~~~----~~~C~C 665 (979)
++++|.. .+|. ++.|++..++|+|.|++||. |..|+ ++++ |... +| .+++.|++..+ +|.|.|
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C 79 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence 6788984 7896 68999999999999999998 78886 5555 7543 23 35788988766 799999
Q ss_pred CCCcc-cCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCC--CCCCC---CccccCCCCCC--CCCCCCceE
Q psy9685 666 SEEYV-GERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPP--GYRGS---RCEINIDECAS--GPCKNSGQC 737 (979)
Q Consensus 666 ~~G~~-G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~--G~~G~---~C~~~~~~C~~--~~C~~~g~C 737 (979)
++||. |..|+ .|.... .++|+|.|++ ||+|. .+..+||||.. ++|.+ ++|
T Consensus 80 ~~G~~~~~~C~----------------~C~~~~-----~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C 137 (162)
T 1uzk_A 80 SLGKAWGTPCE----------------MCPAVN-----TSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKC 137 (162)
T ss_dssp TTCCEETTTTE----------------ECCCTT-----SHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEE
T ss_pred CCCCCcCCCcc----------------cCCCCC-----CCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEe
Confidence 99998 65554 132221 4568999988 99975 34459999975 45975 799
Q ss_pred ecCCCCeEEecCCCCcCCC
Q psy9685 738 IDDVNAFICNCTNTATGAS 756 (979)
Q Consensus 738 ~~~~g~~~C~C~~g~~g~~ 756 (979)
+++.|+|+|.|++||+|..
T Consensus 138 ~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 138 INTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp EECSSCEEEECCTTCCBCT
T ss_pred EcCCCCEEeeCCCCccCCC
Confidence 9999999999999999975
No 57
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.34 E-value=4.9e-14 Score=138.23 Aligned_cols=131 Identities=25% Similarity=0.591 Sum_probs=94.1
Q ss_pred ccC-CCCCCCCceecCCCCCCCCCCCCeecCCCCCC----CCCccccCCC--CCCC--CC--CCCceEecCCC----CeE
Q psy9685 681 SCA-DQPCYFGAVCQDTKISPYFPQGPICDCPPGYR----GSRCEINIDE--CASG--PC--KNSGQCIDDVN----AFI 745 (979)
Q Consensus 681 ~c~-~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~----G~~C~~~~~~--C~~~--~C--~~~g~C~~~~g----~~~ 745 (979)
+|. ..+|. +++|.+. .++|+|.|++||+ |..|+ ++++ |... +| .++++|++..+ +|+
T Consensus 5 eC~~~~~C~-~~~C~n~------~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~ 76 (162)
T 1uzk_A 5 ECLDPTTCI-SGNCVNT------PGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKAS 76 (162)
T ss_dssp GGGSTTSSB-TSEEEEE------TTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHH
T ss_pred cCCCCCCCC-CCEeECC------CCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCce
Confidence 344 36775 5788876 6789999999998 88997 7777 8653 34 34789998877 799
Q ss_pred EecCCCCc-CCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCC--CcCCC---
Q psy9685 746 CNCTNTAT-GASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPIL--GYTGE--- 819 (979)
Q Consensus 746 C~C~~g~~-g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~--g~~G~--- 819 (979)
|.|++||. +..| ..|. .....+|.|.|++ ||.|.
T Consensus 77 C~C~~G~~~~~~C-----------------------------~~C~-----------~~~~~~y~C~C~~g~G~~~~~~~ 116 (162)
T 1uzk_A 77 CCCSLGKAWGTPC-----------------------------EMCP-----------AVNTSEYKILCPGGEGFRPNPIT 116 (162)
T ss_dssp HHTTTCCEETTTT-----------------------------EECC-----------CTTSHHHHHHCTTCTTEEECTTT
T ss_pred eeCCCCCCcCCCc-----------------------------ccCC-----------CCCCCCceeECCCCCCcccCCCC
Confidence 99999997 3322 1111 1234568899987 89875
Q ss_pred CccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCC
Q psy9685 820 MCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYL 860 (979)
Q Consensus 820 ~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~ 860 (979)
.+.+|||||...+..|.+ ++|++..|+|+|.|++||.|..
T Consensus 117 ~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 117 VILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp CCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred CccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 344699999866677975 7999999999999999998754
No 58
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.34 E-value=4.2e-13 Score=128.62 Aligned_cols=112 Identities=29% Similarity=0.688 Sum_probs=89.5
Q ss_pred CCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCc
Q psy9685 729 GPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGV 808 (979)
Q Consensus 729 ~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~ 808 (979)
.+|.++++|++. |+|.|++||+|....
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~-------------------------------------------------- 33 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEI-------------------------------------------------- 33 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSS--------------------------------------------------
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCcccc--------------------------------------------------
Confidence 468889999874 799999999885310
Q ss_pred cccCCCCcCCCCccccCcccccCC-CCCCCCeeeccCCCCeeecCCCCCCCC------------CCCCCCCCCC--CCCC
Q psy9685 809 QTTPILGYTGEMCEIDINECELSS-DMCGNNGECINQPGDYKCACQFDTCGY------------LCNFPDPCKD--EPCQ 873 (979)
Q Consensus 809 ~C~C~~g~~G~~C~~~~~~C~~~~-~~C~~~g~C~~~~gs~~C~C~~g~~G~------------~C~~~~~C~~--~~C~ 873 (979)
....+..|+ ++|+|.... ..|.++++|++.+++|.|.|++||.|. .|+++++|.. .+|.
T Consensus 34 -----~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~ 107 (143)
T 2bou_A 34 -----ITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCD 107 (143)
T ss_dssp -----BCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCC
T ss_pred -----ccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcCCccCccCcCCCCC
Confidence 012356675 899997543 379999999999999999999999876 7888999974 6899
Q ss_pred CCCeeecCCCCCCCeEeecCCCCCCCCCC
Q psy9685 874 NGGTCHEDCRHQADYKCDCLPGWTGKNCT 902 (979)
Q Consensus 874 ~~g~C~~~c~~~~~~~C~C~~G~~G~~C~ 902 (979)
++++|. +..++|+|.|++||+|..+.
T Consensus 108 ~~~~C~---n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 108 SSTVCF---NTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp TTSEEE---ECSSCEEEECCSSSCBCTTC
T ss_pred CCCEEE---CCCCCEEeeCCCCcccCCCC
Confidence 999999 56889999999999987654
No 59
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.34 E-value=2.8e-13 Score=124.69 Aligned_cols=103 Identities=22% Similarity=0.635 Sum_probs=70.7
Q ss_pred ccCCCCCCCCCCCCceEecC-CCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCC
Q psy9685 721 INIDECASGPCKNSGQCIDD-VNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGP 799 (979)
Q Consensus 721 ~~~~~C~~~~C~~~g~C~~~-~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~ 799 (979)
.|+|+|..+||.+ +|++. .++|+|.|++||+|...
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~------------------------------------------ 37 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPH------------------------------------------ 37 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETT------------------------------------------
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCC------------------------------------------
Confidence 3789999999974 99999 99999999999887532
Q ss_pred CCCCCCCCccccCCCCcCCCCccccCccccc--CCCCCCCCeeeccCCCCeeecCCCCCC---CCCCCCCCCCCC-CCCC
Q psy9685 800 GLADSGPGVQTTPILGYTGEMCEIDINECEL--SSDMCGNNGECINQPGDYKCACQFDTC---GYLCNFPDPCKD-EPCQ 873 (979)
Q Consensus 800 ~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~--~~~~C~~~g~C~~~~gs~~C~C~~g~~---G~~C~~~~~C~~-~~C~ 873 (979)
++++|.. ....|. ++|++ .++|.|.|++||. |..|+++++|.. .+|
T Consensus 38 ------------------------~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~~C~dideC~~~~~C- 89 (118)
T 1dx5_I 38 ------------------------EPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDGFICTDIDECENGGFC- 89 (118)
T ss_dssp ------------------------EEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETTTEEEECCHHHHCSSC-
T ss_pred ------------------------CCCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCCCccccccccCCCCCC-
Confidence 1222221 012232 46666 4677777777776 777777777765 667
Q ss_pred CCCeeecCCCCCCCeEeecCCCCCCC
Q psy9685 874 NGGTCHEDCRHQADYKCDCLPGWTGK 899 (979)
Q Consensus 874 ~~g~C~~~c~~~~~~~C~C~~G~~G~ 899 (979)
+++|. +..++|+|.|++||+|.
T Consensus 90 -~~~C~---n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 90 -SGVCH---NLPGTFECICGPDSALA 111 (118)
T ss_dssp -SSEEE---ECSSSEEEEECSSSSCE
T ss_pred -cCeEE---eCCCCEEEECCCCCccC
Confidence 56776 34667777777777653
No 60
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.34 E-value=2e-12 Score=145.70 Aligned_cols=126 Identities=27% Similarity=0.683 Sum_probs=95.8
Q ss_pred CCceEECCCCccCCCCCCCCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCccccccc----------cCC-CCCCCCC
Q psy9685 583 TSYACKCPAGYSSETCAVDIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEID----------ECL-SNPCMNG 651 (979)
Q Consensus 583 ~~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~----------~C~-~~~C~~~ 651 (979)
..+.|.|.+||.|..|+. .| .+|.+++.|.+ +.+.|.|++||.|..|+..++ +|. ..+|.++
T Consensus 183 ~~~~c~C~~g~~G~~C~~---~C--~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~ 255 (423)
T 2gy5_A 183 RLIVRRCEAQKWGPECNH---LC--TACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSY 255 (423)
T ss_dssp EEEECSSCTTEESTTSCE---EC--CCCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTC
T ss_pred cccCCcCCCCCCCCCCCC---CC--CCCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCC
Confidence 345799999999999973 45 37999999987 456899999999999985422 343 3457777
Q ss_pred CEEeeCCCCcEEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCCCCC
Q psy9685 652 GQCEDRLAGFVCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECASGPC 731 (979)
Q Consensus 652 g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C 731 (979)
+.|. .++|.|.|.+||.|..|+. .|.+||.|..|+. .| +|
T Consensus 256 g~C~--~~~~~C~C~~G~~G~~C~~--------------------------------~C~~G~~G~~C~~---~C---~C 295 (423)
T 2gy5_A 256 VFCL--PDPYGCSCATGWKGLQCNE--------------------------------ACHPGFYGPDCKL---RC---SC 295 (423)
T ss_dssp CEEE--TTTTEEECCBTCBSGGGCB--------------------------------CCCTTBCSBTTCC---BC---CC
T ss_pred CEEC--CCCCeEEeCCCcccccccC--------------------------------ccCCCCcCCcccc---cc---cC
Confidence 8885 4567899999999888863 2778888888862 34 58
Q ss_pred CCCceEecCCCCeEEecCCCCcCCCCc
Q psy9685 732 KNSGQCIDDVNAFICNCTNTATGASMG 758 (979)
Q Consensus 732 ~~~g~C~~~~g~~~C~C~~g~~g~~~~ 758 (979)
.++++|.+.. .|.|++||+|..|+
T Consensus 296 ~ngg~C~~~~---~C~C~~G~~G~~Ce 319 (423)
T 2gy5_A 296 NNGEMCDRFQ---GCLCSPGWQGLQCE 319 (423)
T ss_dssp TTCCEEETTT---EEECCTTCBSTTSC
T ss_pred CCCCEecCCC---ceECCCCCcCCCCc
Confidence 8889998764 39998888887653
No 61
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.33 E-value=5.8e-14 Score=135.30 Aligned_cols=125 Identities=31% Similarity=0.632 Sum_probs=91.6
Q ss_pred ccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCC
Q psy9685 721 INIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPG 800 (979)
Q Consensus 721 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~ 800 (979)
.|+|+|...||.+ ++|+++.++|+|.|++||+|..+.- .|...
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~----------------------------~C~~~-------- 44 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKT----------------------------ICIET-------- 44 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSS----------------------------BEEEC--------
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCC----------------------------eecCC--------
Confidence 5899999999985 7999999999999999999875320 01000
Q ss_pred CCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCC----------eeecCCCCC---CCCCCCCCCCC
Q psy9685 801 LADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGD----------YKCACQFDT---CGYLCNFPDPC 867 (979)
Q Consensus 801 ~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs----------~~C~C~~g~---~G~~C~~~~~C 867 (979)
....|..+|.|..|+.++++|.. +..|.+..++ |.|.|++|| .|..|+++++|
T Consensus 45 -------~~~~C~~~~~g~~C~~~~~~c~~-------~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~dideC 110 (147)
T 2w86_A 45 -------IKGTCWQTVIDGRCEININGATL-------KSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDIDEC 110 (147)
T ss_dssp -------CCEEEEEEEETTEEEEEEEEEEC-------HHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEECCHH
T ss_pred -------CCCcccCCCCCCccccCCCcccc-------CCccccCcCcccCCCcccCCCcccCCCccccCCCCccCccccc
Confidence 01245557778888877777742 1233333332 788999999 49999999999
Q ss_pred CCC--CCCCCCeeecCCCCCCCeEeecCCCCCCCC
Q psy9685 868 KDE--PCQNGGTCHEDCRHQADYKCDCLPGWTGKN 900 (979)
Q Consensus 868 ~~~--~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~ 900 (979)
... +|.+ ++|. +..++|+|.|++||+|..
T Consensus 111 ~~~~~~C~~-g~C~---n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 111 EVFPGVCKN-GLCV---NTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp HHSTTCSSS-SEEE---EETTEEEEECCTTCCBCT
T ss_pred cCCCCCCCC-CEEE---CCCCCEEeeCCCCCccCC
Confidence 754 4986 5998 558899999999998653
No 62
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.28 E-value=1.5e-12 Score=119.81 Aligned_cols=104 Identities=33% Similarity=0.761 Sum_probs=77.8
Q ss_pred ccccCCCCCCCCCCEEeeC-CCCcEEecCCCcccCccccc-cccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCC-
Q psy9685 639 EIDECLSNPCMNGGQCEDR-LAGFVCNCSEEYVGERCESL-RQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYR- 715 (979)
Q Consensus 639 ~~~~C~~~~C~~~g~C~~~-~~~~~C~C~~G~~G~~C~~~-~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~- 715 (979)
++++|...||.+ +|++. .++|+|.|++||.|..++.. ....|...+|. +.|.+. ++|+|.|++||+
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~~-------~~y~C~C~~Gy~~ 71 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDPN-------TQASCECPEGYIL 71 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECTT-------STTCEECCTTEEE
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC--CcccCC-------CCeEeECCCCccC
Confidence 567777777763 78887 77888888888887644211 01124444454 567642 568999999999
Q ss_pred --CCCccccCCCCCC-CCCCCCceEecCCCCeEEecCCCCcCCC
Q psy9685 716 --GSRCEINIDECAS-GPCKNSGQCIDDVNAFICNCTNTATGAS 756 (979)
Q Consensus 716 --G~~C~~~~~~C~~-~~C~~~g~C~~~~g~~~C~C~~g~~g~~ 756 (979)
|..|+ ++++|.. ++| +++|++..++|+|.|++||+|..
T Consensus 72 ~~g~~C~-dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 72 DDGFICT-DIDECENGGFC--SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp ETTTEEE-ECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred CCCCccc-cccccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence 88995 8999987 889 68999999999999999998864
No 63
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.28 E-value=2.9e-13 Score=130.33 Aligned_cols=137 Identities=36% Similarity=0.731 Sum_probs=91.1
Q ss_pred cccccCCCCCCCCCCEEeeCCCCcEEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCC
Q psy9685 638 KEIDECLSNPCMNGGQCEDRLAGFVCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGS 717 (979)
Q Consensus 638 ~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~ 717 (979)
.++++|...||.+ ++|++..++|+|.|++||+|..+. ..|.... .+.|.++|.|.
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~---------------~~C~~~~---------~~~C~~~~~g~ 56 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTK---------------TICIETI---------KGTCWQTVIDG 56 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTS---------------SBEEECC---------CEEEEEEEETT
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCC---------------CeecCCC---------CCcccCCCCCC
Confidence 4678888888875 689888888999999999876543 2333221 23466677777
Q ss_pred CccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCC
Q psy9685 718 RCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPG 797 (979)
Q Consensus 718 ~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~ 797 (979)
.|+.++++|.. ...|.+..+++ .|.. |..
T Consensus 57 ~C~~~~~~c~~-----~~~C~~~~g~~--------~g~~-----------------------------C~~--------- 85 (147)
T 2w86_A 57 RCEININGATL-----KSQCCSSLGAA--------WGSP-----------------------------CTL--------- 85 (147)
T ss_dssp EEEEEEEEEEC-----HHHHHTTTCSE--------ETTT-----------------------------TEE---------
T ss_pred ccccCCCcccc-----CCccccCcCcc--------cCCC-----------------------------ccc---------
Confidence 78766655532 12232222211 0110 000
Q ss_pred CCCCCCCCCCccccCCCCc---CCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCC
Q psy9685 798 GPGLADSGPGVQTTPILGY---TGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYL 860 (979)
Q Consensus 798 ~~~~~~~~~~~~C~C~~g~---~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~ 860 (979)
-.+.|.|++|| .|..|+ |+|||...+..|.+ ++|++..|+|+|.|++||.|..
T Consensus 86 --------c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 86 --------CQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp --------CCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred --------CCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 01356777788 489997 99999876778985 6999999999999999998653
No 64
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.23 E-value=8.5e-12 Score=108.52 Aligned_cols=84 Identities=24% Similarity=0.470 Sum_probs=70.8
Q ss_pred CccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCC--CCCCCCCCCCCCCCeeecCCCC
Q psy9685 807 GVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCN--FPDPCKDEPCQNGGTCHEDCRH 884 (979)
Q Consensus 807 ~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~--~~~~C~~~~C~~~g~C~~~c~~ 884 (979)
+|.|.|.+||.|..|+ +++|.. ..|.+..++|.|.|++||. .|+ ++++|..+||.|+|+|... ..
T Consensus 1 sy~C~C~~g~~g~~c~--~~~c~~--------~pC~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~-~~ 67 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQ--QHQSWL--------RPVLRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQA-LY 67 (91)
T ss_dssp CCCCCCBCSSSCCBCC--SSCEEE--------EECSSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEE-SS
T ss_pred CeeeECCCCCcCCeEC--CCcccC--------CccccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecC-CC
Confidence 3789999999999995 778842 3577788999999999998 897 6899999999999999942 11
Q ss_pred CCCeEeecCCCCCCCCCCc
Q psy9685 885 QADYKCDCLPGWTGKNCTE 903 (979)
Q Consensus 885 ~~~~~C~C~~G~~G~~C~~ 903 (979)
.++|+|.|++||+|.+|+.
T Consensus 68 ~~~~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 68 FSDFVCQCPEGFAGKSCEI 86 (91)
T ss_dssp SSCEEEECCTTCBSSSCCB
T ss_pred CCCeEeECCCCCcCCcCCc
Confidence 2789999999999999984
No 65
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.19 E-value=1.3e-11 Score=107.45 Aligned_cols=83 Identities=27% Similarity=0.626 Sum_probs=72.3
Q ss_pred CceEECCCCccCCCCCCCCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCccc-cccccCCCCCCCCCCEEeeCC--CC
Q psy9685 584 SYACKCPAGYSSETCAVDIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCE-KEIDECLSNPCMNGGQCEDRL--AG 660 (979)
Q Consensus 584 ~~~C~C~~G~~g~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~-~~~~~C~~~~C~~~g~C~~~~--~~ 660 (979)
+|.|.|.+||+|..|+ +++|...||.+ ..+.|.|.|++||. .|+ .++++|..+||.++|+|++.. ++
T Consensus 1 sy~C~C~~g~~g~~c~--~~~c~~~pC~n------~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~ 70 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQ--QHQSWLRPVLR------SNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSD 70 (91)
T ss_dssp CCCCCCBCSSSCCBCC--SSCEEEEECSS------SSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSSC
T ss_pred CeeeECCCCCcCCeEC--CCcccCCcccc------CCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCCC
Confidence 5899999999999985 57787666544 46789999999998 887 578999999999999999877 89
Q ss_pred cEEecCCCcccCcccc
Q psy9685 661 FVCNCSEEYVGERCES 676 (979)
Q Consensus 661 ~~C~C~~G~~G~~C~~ 676 (979)
|.|.|++||+|..|+.
T Consensus 71 ~~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 71 FVCQCPEGFAGKSCEI 86 (91)
T ss_dssp EEEECCTTCBSSSCCB
T ss_pred eEeECCCCCcCCcCCc
Confidence 9999999999999983
No 66
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.06 E-value=7e-11 Score=101.87 Aligned_cols=76 Identities=33% Similarity=0.771 Sum_probs=63.2
Q ss_pred cCCCCCCCC--CCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCC
Q psy9685 722 NIDECASGP--CKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGP 799 (979)
Q Consensus 722 ~~~~C~~~~--C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~ 799 (979)
|+|+|...+ |.+ ++|+++.++|+|.|++||++..
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~------------------------------------------- 37 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGF------------------------------------------- 37 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECT-------------------------------------------
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccC-------------------------------------------
Confidence 789998766 964 6999999999999999987631
Q ss_pred CCCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCC
Q psy9685 800 GLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGY 859 (979)
Q Consensus 800 ~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~ 859 (979)
+.|..|+ |+|||...+..|. +++|++..|+|+|.|++||.+.
T Consensus 38 ----------------~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 38 ----------------MMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp ----------------TTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred ----------------CCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 2366786 8999987666786 4799999999999999999875
No 67
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.04 E-value=1.1e-10 Score=99.49 Aligned_cols=71 Identities=38% Similarity=0.982 Sum_probs=62.3
Q ss_pred cCcccccCCCCCCCCeeeccCCCCeeecCCCCCC--CCCCCCCCCCC-CCCCCCCCeeecCCCCCCCeEeecCCCCCCCC
Q psy9685 824 DINECELSSDMCGNNGECINQPGDYKCACQFDTC--GYLCNFPDPCK-DEPCQNGGTCHEDCRHQADYKCDCLPGWTGKN 900 (979)
Q Consensus 824 ~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~--G~~C~~~~~C~-~~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~ 900 (979)
|+|+|.. ...|.+ ++|++.+++|.|.|++||. |..|+++++|. .++|.+ ++|. +..++|+|.|++||+|..
T Consensus 4 dideC~~-~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~-~~C~---n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 4 DMDECKE-PDVCKH-GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGN-GTCK---NVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CCCSSSS-TTSCSS-SEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSS-SCEE---ECSSSEEECCSSSSCCCS
T ss_pred ccccCCC-CCCcCC-CEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCC-CEeE---CCCCCEEeECCCCeEeCC
Confidence 8999975 577875 8999999999999999996 99999999997 678986 6999 458899999999999763
No 68
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.98 E-value=2.5e-10 Score=108.92 Aligned_cols=82 Identities=27% Similarity=0.620 Sum_probs=63.0
Q ss_pred CccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCC
Q psy9685 718 RCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPG 797 (979)
Q Consensus 718 ~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~ 797 (979)
.|. ++|+|..+||.++++|++..++|+|.|++||+|
T Consensus 44 ~c~-dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G------------------------------------------- 79 (146)
T 1x7a_L 44 QYV-DGDQCEPNPCLNGGLCKDDINSYECWCQVGFEG------------------------------------------- 79 (146)
T ss_dssp -------CCSSCSSCTTCEEEECSSCEEEECCSSEES-------------------------------------------
T ss_pred cCC-CcCcCCCCCCCCCCEeECCCCCEEEecCCCCcC-------------------------------------------
Confidence 453 899999999999999999999999999886554
Q ss_pred CCCCCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeee-ccCCCCeeecCCCCCC----CCCCCCCCCC
Q psy9685 798 GPGLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGEC-INQPGDYKCACQFDTC----GYLCNFPDPC 867 (979)
Q Consensus 798 ~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C-~~~~gs~~C~C~~g~~----G~~C~~~~~C 867 (979)
..|+ ++|+|...+..|.+ +| ++..|+|.|.|++||. |..|++++++
T Consensus 80 ---------------------~~C~-~~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~~ 130 (146)
T 1x7a_L 80 ---------------------KNCE-LDATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCKPAVPF 130 (146)
T ss_dssp ---------------------TTTC-EECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEEECSSS
T ss_pred ---------------------CcCC-CCccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCCC
Confidence 4454 45888755567876 89 9999999999999998 8899876543
No 69
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.95 E-value=7.9e-10 Score=94.15 Aligned_cols=73 Identities=36% Similarity=0.819 Sum_probs=60.1
Q ss_pred cCCCCCC-CCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCC
Q psy9685 722 NIDECAS-GPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPG 800 (979)
Q Consensus 722 ~~~~C~~-~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~ 800 (979)
|+|+|.. .+|.+ ++|+++.++|+|.|++||++.
T Consensus 4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~--------------------------------------------- 37 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILA--------------------------------------------- 37 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEE---------------------------------------------
T ss_pred ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECC---------------------------------------------
Confidence 8999985 78975 899999999999999876532
Q ss_pred CCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCC
Q psy9685 801 LADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYL 860 (979)
Q Consensus 801 ~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~ 860 (979)
|..|+ ++|||.. ...|.+ ++|++..|+|.|.|++||.|..
T Consensus 38 -----------------g~~C~-dideC~~-~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 38 -----------------GNECV-DTDECSV-GNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp -----------------TTEEE-ECCGGGT-CCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred -----------------CCccC-CcccccC-CCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 45563 8999964 467875 6999999999999999998763
No 70
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.94 E-value=1.7e-10 Score=99.37 Aligned_cols=71 Identities=42% Similarity=1.100 Sum_probs=61.6
Q ss_pred cCcccccCCCCCCCCeeeccCCCCeeecCCCCCC-----CCCCCCCCCCCCCC--CCCCCeeecCCCCCCCeEeecCCCC
Q psy9685 824 DINECELSSDMCGNNGECINQPGDYKCACQFDTC-----GYLCNFPDPCKDEP--CQNGGTCHEDCRHQADYKCDCLPGW 896 (979)
Q Consensus 824 ~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~-----G~~C~~~~~C~~~~--C~~~g~C~~~c~~~~~~~C~C~~G~ 896 (979)
|+|||...+..|.+ ++|++.+|+|.|.|++||. |..|+++++|...+ |. +++|. +..++|+|.|++||
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~---n~~g~y~C~C~~G~ 76 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCH---NTEGSYRCECPPGH 76 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEE---EETTEEEEESCTTS
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeE---cCCCCEEEECcCCc
Confidence 78999876677965 6999999999999999997 88999999998766 65 58999 56889999999999
Q ss_pred CCC
Q psy9685 897 TGK 899 (979)
Q Consensus 897 ~G~ 899 (979)
++.
T Consensus 77 ~~~ 79 (86)
T 1lmj_A 77 QLS 79 (86)
T ss_dssp CCC
T ss_pred ccC
Confidence 875
No 71
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.93 E-value=1.5e-10 Score=114.78 Aligned_cols=88 Identities=26% Similarity=0.698 Sum_probs=36.1
Q ss_pred CccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCC
Q psy9685 718 RCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPG 797 (979)
Q Consensus 718 ~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~ 797 (979)
.|. ++++|...||.++|+|++..++|+|.|++||
T Consensus 38 ~c~-dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf--------------------------------------------- 71 (195)
T 1nfu_B 38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLEGF--------------------------------------------- 71 (195)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCC-CCcccCCCCCCCCCEeECCCCCeeEeCCCCc---------------------------------------------
Confidence 353 8999999999999999999999999998754
Q ss_pred CCCCCCCCCCccccCCCCcCCCCccccC-cccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCCCCCCCCCC
Q psy9685 798 GPGLADSGPGVQTTPILGYTGEMCEIDI-NECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFPDPCKDEPC 872 (979)
Q Consensus 798 ~~~~~~~~~~~~C~C~~g~~G~~C~~~~-~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~~~C~~~~C 872 (979)
.|..|+.++ ++|...+..|.+ +|++..|+|.|.|++||. |..|++++ ..||
T Consensus 72 -------------------~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~---~~PC 127 (195)
T 1nfu_B 72 -------------------EGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACIPTG---PYPC 127 (195)
T ss_dssp ----------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEEESS---SSCT
T ss_pred -------------------eeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCCccccCC---CCCC
Confidence 455566556 789765567876 999999999999999998 99998653 3466
Q ss_pred CCC
Q psy9685 873 QNG 875 (979)
Q Consensus 873 ~~~ 875 (979)
.+.
T Consensus 128 ~~~ 130 (195)
T 1nfu_B 128 GKQ 130 (195)
T ss_dssp TCC
T ss_pred CCC
Confidence 654
No 72
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.92 E-value=6.8e-10 Score=101.29 Aligned_cols=89 Identities=26% Similarity=0.607 Sum_probs=63.3
Q ss_pred cCCCCCCCC--------CCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCC
Q psy9685 722 NIDECASGP--------CKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLD 793 (979)
Q Consensus 722 ~~~~C~~~~--------C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~ 793 (979)
|+|+|...| |.++++|++..++|+|.|++||+|..
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~------------------------------------- 47 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRF------------------------------------- 47 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTT-------------------------------------
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCC-------------------------------------
Confidence 678888888 99999999999999999998776653
Q ss_pred CCCCCCCCCCCCCCccccCCCCcCCCCcccc--CcccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCCCCC
Q psy9685 794 SGPGGPGLADSGPGVQTTPILGYTGEMCEID--INECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFPDPC 867 (979)
Q Consensus 794 ~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~--~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~~~C 867 (979)
|+.. +++|...+..|.+ +|++..|+|.|.|++||. |..|+..
T Consensus 48 ---------------------------C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~~--- 95 (114)
T 1aut_L 48 ---------------------------CQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGDDLLQCHPA--- 95 (114)
T ss_dssp ---------------------------SCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEECTTSSCEEEC---
T ss_pred ---------------------------cCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeECCCCCccCcC---
Confidence 3322 3467644455665 899999999999999998 5667643
Q ss_pred CCCCCCCCCeee
Q psy9685 868 KDEPCQNGGTCH 879 (979)
Q Consensus 868 ~~~~C~~~g~C~ 879 (979)
...+|.+.+.|+
T Consensus 96 ~~~pC~~~~~~i 107 (114)
T 1aut_L 96 VKFPCGRPWKRM 107 (114)
T ss_dssp SSSCTTCCC---
T ss_pred cccCCCCCCccC
Confidence 345788877776
No 73
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.90 E-value=4.1e-10 Score=97.16 Aligned_cols=73 Identities=30% Similarity=0.744 Sum_probs=62.3
Q ss_pred cCcccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCCCCCCCCCCCCCCeeecCCCCCCCeEeecCCCCCCC
Q psy9685 824 DINECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFPDPCKDEPCQNGGTCHEDCRHQADYKCDCLPGWTGK 899 (979)
Q Consensus 824 ~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~~~C~~~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~ 899 (979)
|+|||...+..| ++++|++.+++|+|.|++||. |..|+++++|...+|. ++|. +..++|+|.|+ ||.|.
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~--~~C~---n~~g~y~C~C~-g~~G~ 74 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECSENMCA--QLCV---NYPGGYTCYCD-GKKGF 74 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCS--SEEC---CCSSSCCEECC-SSSCC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCC--CEEE---ccCCCEEEECC-CCcCC
Confidence 689998766669 778999999999999999998 8899999999888997 6898 56889999997 66666
Q ss_pred CCCc
Q psy9685 900 NCTE 903 (979)
Q Consensus 900 ~C~~ 903 (979)
.|+.
T Consensus 75 ~~~~ 78 (87)
T 1z6c_A 75 KLAQ 78 (87)
T ss_dssp BCCT
T ss_pred cccC
Confidence 6543
No 74
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.89 E-value=6.6e-10 Score=95.89 Aligned_cols=74 Identities=34% Similarity=0.845 Sum_probs=60.7
Q ss_pred cCCCCCCCC--CCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCC
Q psy9685 722 NIDECASGP--CKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGP 799 (979)
Q Consensus 722 ~~~~C~~~~--C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~ 799 (979)
++++|...+ | ++++|++..++|+|.|++||++..
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~------------------------------------------- 37 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNL------------------------------------------- 37 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEET-------------------------------------------
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECC-------------------------------------------
Confidence 689998877 8 778999999999999999887532
Q ss_pred CCCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCC
Q psy9685 800 GLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCN 862 (979)
Q Consensus 800 ~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~ 862 (979)
.|..|+ +++||.. ..|. ++|++.+|+|.|.|+ |+.|..|+
T Consensus 38 -----------------~g~~C~-dideC~~--~~C~--~~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 38 -----------------KSKSCE-DIDECSE--NMCA--QLCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp -----------------TTTEEE-CCCHHHH--SCCS--SEECCCSSSCCEECC-SSSCCBCC
T ss_pred -----------------CCCcCC-CcCeeCC--CCCC--CEEEccCCCEEEECC-CCcCCccc
Confidence 255675 8999964 5686 599999999999998 77787775
No 75
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.88 E-value=9.9e-10 Score=104.49 Aligned_cols=80 Identities=29% Similarity=0.665 Sum_probs=61.6
Q ss_pred ccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCC
Q psy9685 721 INIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPG 800 (979)
Q Consensus 721 ~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~ 800 (979)
.++++|...||.++++|++..++|+|.|++||+|
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G---------------------------------------------- 78 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEG---------------------------------------------- 78 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEES----------------------------------------------
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccC----------------------------------------------
Confidence 3789999999999999999999999999986654
Q ss_pred CCCCCCCccccCCCCcCCCCccccCcccc---cCCCCCCCCeeeccCCC-CeeecCCCCCC----CCCCCCCCC
Q psy9685 801 LADSGPGVQTTPILGYTGEMCEIDINECE---LSSDMCGNNGECINQPG-DYKCACQFDTC----GYLCNFPDP 866 (979)
Q Consensus 801 ~~~~~~~~~C~C~~g~~G~~C~~~~~~C~---~~~~~C~~~g~C~~~~g-s~~C~C~~g~~----G~~C~~~~~ 866 (979)
..|+.++++|. ..+..|.+ +|++..| +|.|.|++||. |..|+++++
T Consensus 79 ------------------~~C~~~~~~c~~c~~~~~~C~~--~C~~~~g~~y~C~C~~Gy~l~~dG~~C~~~~e 132 (142)
T 2c4f_L 79 ------------------RNCETHKDDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 132 (142)
T ss_dssp ------------------TTSCEEGGGCCSTTTGGGGCSS--EEECCTTSCCEEECCTTEEECTTSSCEEESSS
T ss_pred ------------------CccccCccccccccCCCCCccC--EeECCCCCCEEEECCCCceECCCCCCCCCCCc
Confidence 44543345542 11223433 8999999 99999999998 899987654
No 76
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.88 E-value=1.8e-09 Score=102.69 Aligned_cols=87 Identities=37% Similarity=0.781 Sum_probs=72.9
Q ss_pred CCCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCccccccccCCCCCCCCCC---EEeeCCC-CcEEecCCCcc----c
Q psy9685 600 VDIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEIDECLSNPCMNGG---QCEDRLA-GFVCNCSEEYV----G 671 (979)
Q Consensus 600 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g---~C~~~~~-~~~C~C~~G~~----G 671 (979)
.++++|...||.+++.|++..++|.|.|++||.|..|+..+++|...+|.+++ .|++..+ +|.|.|++||+ |
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG 124 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTS
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCC
Confidence 36789999999999999999999999999999999998766777555666656 9999998 99999999999 8
Q ss_pred CccccccccccCCCC
Q psy9685 672 ERCESLRQISCADQP 686 (979)
Q Consensus 672 ~~C~~~~~~~c~~~~ 686 (979)
..|+..+...|...|
T Consensus 125 ~~C~~~~e~pCg~~p 139 (142)
T 2c4f_L 125 VSCTPTVEYPCGKIP 139 (142)
T ss_dssp SCEEESSSSCTTCCT
T ss_pred CCCCCCCccCCCCCC
Confidence 899876654554443
No 77
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.86 E-value=1.6e-09 Score=109.65 Aligned_cols=103 Identities=31% Similarity=0.694 Sum_probs=77.4
Q ss_pred CCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCC---------CCC----CCCCCCCceEecCCCCeEEecCCC
Q psy9685 685 QPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINID---------ECA----SGPCKNSGQCIDDVNAFICNCTNT 751 (979)
Q Consensus 685 ~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~---------~C~----~~~C~~~g~C~~~~g~~~C~C~~g 751 (979)
..|.++|.|... .|.|.+||+|..|+.+.+ .|. ..+|.++|+|++. +|.|.+|
T Consensus 96 ~~Csg~G~C~~g----------~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g----~C~C~~g 161 (217)
T 2p28_B 96 SLCHGKGFLECG----------ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTS 161 (217)
T ss_dssp CTTTTSEEEETT----------EEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETT----EEEECCC
T ss_pred CccCCCceEECC----------EEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCC----ceECCCC
Confidence 457788888743 799999999999985543 364 3468889999852 7999988
Q ss_pred CcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccC
Q psy9685 752 ATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELS 831 (979)
Q Consensus 752 ~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~ 831 (979)
|.+.. .|+|..|+.+.+.|...
T Consensus 162 w~~~~----------------------------------------------------------~~~G~~Ce~~~~~C~~~ 183 (217)
T 2p28_B 162 DVPGK----------------------------------------------------------LIYGQYCECDTINCERY 183 (217)
T ss_dssp CSTTC----------------------------------------------------------CEESTTSCEESSCSCEE
T ss_pred CCCcc----------------------------------------------------------cEECCCcccCCccCCCC
Confidence 75532 57888888777778532
Q ss_pred -CCCCCCC--eeeccCCCCeeecCCCCCCCCCCCC
Q psy9685 832 -SDMCGNN--GECINQPGDYKCACQFDTCGYLCNF 863 (979)
Q Consensus 832 -~~~C~~~--g~C~~~~gs~~C~C~~g~~G~~C~~ 863 (979)
...|.++ |+|.+ | +|.|.+||.|..|+.
T Consensus 184 ~g~~C~~~~~G~C~~--g--~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 184 NGQVCGGPGRGLCFC--G--KCRCHPGFEGSACQH 214 (217)
T ss_dssp TTEETTCTTTEEEET--T--EEEECTTEESTTSCE
T ss_pred CCCCCCCCCCcEEeC--C--eeECCCCCccCCcCC
Confidence 2368887 99985 2 899999999999863
No 78
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.83 E-value=5.1e-10 Score=105.24 Aligned_cols=81 Identities=26% Similarity=0.699 Sum_probs=31.7
Q ss_pred CccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCC
Q psy9685 718 RCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPG 797 (979)
Q Consensus 718 ~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~ 797 (979)
.|. ++++|...||.++++|++..++|+|.|++||+
T Consensus 38 ~c~-d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~-------------------------------------------- 72 (134)
T 2vh0_B 38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLEGFE-------------------------------------------- 72 (134)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCC-CcCcCCCCCCCCcCCcccCCCCEEeeCCCCcc--------------------------------------------
Confidence 453 78999999999999999999999999987554
Q ss_pred CCCCCCCCCCccccCCCCcCCCCccccC-cccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCCC
Q psy9685 798 GPGLADSGPGVQTTPILGYTGEMCEIDI-NECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFPD 865 (979)
Q Consensus 798 ~~~~~~~~~~~~C~C~~g~~G~~C~~~~-~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~~ 865 (979)
|..|+.++ ++|...+..|.+ +|++..|+|.|.|++||. |..|++++
T Consensus 73 --------------------G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 73 --------------------GKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp ----------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred --------------------CCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCccCcCC
Confidence 45565446 788755566876 999999999999999998 88997643
No 79
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.82 E-value=9.2e-10 Score=98.68 Aligned_cols=77 Identities=26% Similarity=0.502 Sum_probs=40.1
Q ss_pred CCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCC---CCCCCCCCCCC-CCCCCCCeeecCCCCCCCeE
Q psy9685 814 LGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCG---YLCNFPDPCKD-EPCQNGGTCHEDCRHQADYK 889 (979)
Q Consensus 814 ~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G---~~C~~~~~C~~-~~C~~~g~C~~~c~~~~~~~ 889 (979)
.+|.|..| ++++|...+..|. .+|++.+++|.|.|++||.| ..|+++++|.. .+|. +.|. +..++|.
T Consensus 20 ~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~---n~~gsy~ 90 (107)
T 2w2n_E 20 NLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCV---NLEGGYK 90 (107)
T ss_dssp CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC---------------------------
T ss_pred CCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcC--Ceee---cCCCCEE
Confidence 48999999 5899986556786 48999999999999999987 89999999974 6785 6888 4588999
Q ss_pred eecCCCCCCC
Q psy9685 890 CDCLPGWTGK 899 (979)
Q Consensus 890 C~C~~G~~G~ 899 (979)
|.|++||++.
T Consensus 91 C~C~~Gy~~~ 100 (107)
T 2w2n_E 91 CQCEEGFQLD 100 (107)
T ss_dssp ----------
T ss_pred EECCCCceEC
Confidence 9999999864
No 80
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.81 E-value=1.3e-09 Score=97.75 Aligned_cols=81 Identities=28% Similarity=0.548 Sum_probs=37.1
Q ss_pred CCCCCCCCCccccCCCCCCC--CCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCC
Q psy9685 710 CPPGYRGSRCEINIDECASG--PCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCP 787 (979)
Q Consensus 710 C~~G~~G~~C~~~~~~C~~~--~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~ 787 (979)
...||.|..| ++++|... .|. +.|++..++|+|.|++||+|.+
T Consensus 18 ~~~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~------------------------------- 62 (107)
T 2w2n_E 18 TENLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVA------------------------------- 62 (107)
T ss_dssp --CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEET-------------------------------
T ss_pred cCCCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccC-------------------------------
Confidence 5678999999 58999864 464 6999999999999999887631
Q ss_pred CCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCC
Q psy9685 788 ECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGY 859 (979)
Q Consensus 788 ~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~ 859 (979)
|..|+ |+|||.. ...|. ++|++.+|+|.|.|++||.+.
T Consensus 63 ------------------------------g~~C~-dideC~~-~~~C~--~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 63 ------------------------------QRRCE-DIDECQD-PDTCS--QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp ------------------------------TTEEE-C-----------------------------------
T ss_pred ------------------------------CCccc-cccccCC-CCCcC--CeeecCCCCEEEECCCCceEC
Confidence 35576 8999963 46786 699999999999999999765
No 81
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.80 E-value=2.2e-09 Score=104.23 Aligned_cols=29 Identities=38% Similarity=0.913 Sum_probs=22.7
Q ss_pred CCCCCCEEeeCC--CCcEE-ecCCCcccCccc
Q psy9685 647 PCMNGGQCEDRL--AGFVC-NCSEEYVGERCE 675 (979)
Q Consensus 647 ~C~~~g~C~~~~--~~~~C-~C~~G~~G~~C~ 675 (979)
||.++++|.... +.++| .|+++|+|.+|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence 577888887654 46788 688999888887
No 82
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.80 E-value=6.8e-08 Score=117.34 Aligned_cols=90 Identities=24% Similarity=0.476 Sum_probs=70.9
Q ss_pred ccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCC---CCCCCCCCCCC-CCCCCCCCeeecCCC
Q psy9685 808 VQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTC---GYLCNFPDPCK-DEPCQNGGTCHEDCR 883 (979)
Q Consensus 808 ~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~---G~~C~~~~~C~-~~~C~~~g~C~~~c~ 883 (979)
+.+.|..|..+..++-+++||......|.+ +|++.+++|.|.|++||. |..|++++||. ..+|. ..|. +
T Consensus 277 ~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~---n 349 (699)
T 1n7d_A 277 MARDCRDWSDEPIKECGTNECLDNNGGCSH--VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCV---N 349 (699)
T ss_dssp SSCCSSSSCSCCCSSCCCCCTTSSTTTSCT--TCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCT--TTCC---B
T ss_pred ccceecCcccccccccccccccccccCcCC--CcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccc--cccc---c
Confidence 456788888776444468999876677864 899999999999999998 88999999997 34664 3666 4
Q ss_pred CCCCeEeecCCCCCC----CCCCcC
Q psy9685 884 HQADYKCDCLPGWTG----KNCTEV 904 (979)
Q Consensus 884 ~~~~~~C~C~~G~~G----~~C~~~ 904 (979)
..++|+|.|.+||++ ..|...
T Consensus 350 ~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 350 LEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp CSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred CCCCeeeeeecccccCCCCCccccc
Confidence 588999999999984 567643
No 83
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.79 E-value=3.8e-08 Score=119.53 Aligned_cols=175 Identities=25% Similarity=0.541 Sum_probs=114.3
Q ss_pred CCCCCeeccCCCceee----ecCCCCCCCccccccccCCCC--CCCCCCEEeeCCCCcEEe----cCCCcccCccccccc
Q psy9685 610 CQNGARCIDGVARYSC----ECTPGWEGALCEKEIDECLSN--PCMNGGQCEDRLAGFVCN----CSEEYVGERCESLRQ 679 (979)
Q Consensus 610 C~~~~~C~~~~g~~~C----~C~~G~~G~~C~~~~~~C~~~--~C~~~g~C~~~~~~~~C~----C~~G~~G~~C~~~~~ 679 (979)
|.++ .|+.. .+.| .|..|.....|. ..+|... .|. .+.|+.. ++.|. |..|..+..|...
T Consensus 183 C~~g-~Ci~~--~~~CDg~~dC~dgsDE~~C~--~~~C~~~~f~C~-~g~Ci~~--~~~Cdg~~dC~dgsde~~C~~~-- 252 (699)
T 1n7d_A 183 CLSG-ECIHS--SWRCDGGPDCKDKSDEENCA--VATCRPDEFQCS-DGNCIHG--SRQCDREYDCKDMSDEVGCVNV-- 252 (699)
T ss_dssp CSSS-CCCST--TCTTSSSCCSTTSCSSCSCC--CCCCCSSEEESS-SSCEEET--TCCSSSCCCSSSSCSSSSTTCC--
T ss_pred cCCC-ceEec--hhccCCCCCCCCCcccccCC--CcccCCCcEecC-CCceeee--ecccCCCCCCCCCCccCCCCCC--
Confidence 4433 66543 4566 688887776674 2345432 476 4788874 56775 8888887777542
Q ss_pred cccC---CCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCC
Q psy9685 680 ISCA---DQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGAS 756 (979)
Q Consensus 680 ~~c~---~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~ 756 (979)
..|. ...|.+ +.|..... .-.+.+.|..|+.+..++.++++|..++....+.|.++.++|+|.|++||.+.+
T Consensus 253 ~~C~~~~~~~C~~-g~Ci~~~~----~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~ 327 (699)
T 1n7d_A 253 TLCEGPNKFKCHS-GECITLDK----VCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 327 (699)
T ss_dssp CCCCSTTCCCCTT-SCCCCSSC----CSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCS
T ss_pred CcccCCCceecCC-CcEeCCcc----cccccceecCcccccccccccccccccccCcCCCcccCCCCcEEeCCCCeEcCC
Confidence 1231 234544 56654321 113467888888766444468888755422246899999999999998876521
Q ss_pred CccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccCCCCCC
Q psy9685 757 MGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCG 836 (979)
Q Consensus 757 ~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~ 836 (979)
|..|+ +++||.. ...|.
T Consensus 328 -------------------------------------------------------------~~~C~-dideC~~-~~~C~ 344 (699)
T 1n7d_A 328 -------------------------------------------------------------QRRCE-DIDECQD-PDTCS 344 (699)
T ss_dssp -------------------------------------------------------------SSCCC-CCCCCSS-SSSCT
T ss_pred -------------------------------------------------------------CCccc-CccccCC-CCccc
Confidence 45575 8999963 45786
Q ss_pred CCeeeccCCCCeeecCCCCCCC----CCCCCC
Q psy9685 837 NNGECINQPGDYKCACQFDTCG----YLCNFP 864 (979)
Q Consensus 837 ~~g~C~~~~gs~~C~C~~g~~G----~~C~~~ 864 (979)
+ +|+|+.|+|+|.|++||.+ ..|...
T Consensus 345 ~--~C~n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 345 Q--LCVNLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp T--TCCBCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred c--ccccCCCCeeeeeecccccCCCCCccccc
Confidence 5 8999999999999999974 456543
No 84
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.79 E-value=5.1e-09 Score=122.70 Aligned_cols=62 Identities=24% Similarity=0.466 Sum_probs=46.5
Q ss_pred eccCCCCeee-cCCCCCCCCCCCCCCCCCCCCCCCCCeeecC--CCCCCCeEeecCCCCCCCCCCc
Q psy9685 841 CINQPGDYKC-ACQFDTCGYLCNFPDPCKDEPCQNGGTCHED--CRHQADYKCDCLPGWTGKNCTE 903 (979)
Q Consensus 841 C~~~~gs~~C-~C~~g~~G~~C~~~~~C~~~~C~~~g~C~~~--c~~~~~~~C~C~~G~~G~~C~~ 903 (979)
|.....+..| .|.+||.|..|+....|...+|.++|+|... |+ ..+++|.|.+||+|..|+.
T Consensus 411 C~~g~~G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd-~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 411 CKLHVEGERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCD-SETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp BCTTEETTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBC-TTTCCBCBCTTCCSTTTCC
T ss_pred CCCCCCCCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCccc-CCCCEEECCCCCcCCCccc
Confidence 4333334566 6899999999988888888888888877532 22 3467899999999999974
No 85
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.77 E-value=4.4e-09 Score=106.42 Aligned_cols=61 Identities=23% Similarity=0.468 Sum_probs=50.9
Q ss_pred CCCCCCCceecCCCCCCCCCCCCeecCCCC------CCCCCccccCCCCCCC---CCCCC--ceEecCCCCeEEecCCCC
Q psy9685 684 DQPCYFGAVCQDTKISPYFPQGPICDCPPG------YRGSRCEINIDECASG---PCKNS--GQCIDDVNAFICNCTNTA 752 (979)
Q Consensus 684 ~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G------~~G~~C~~~~~~C~~~---~C~~~--g~C~~~~g~~~C~C~~g~ 752 (979)
..+|.++|+|... +|.|.+| |+|..|+.+++.|... +|.++ |+|.+. +|.|.+||
T Consensus 142 ~~~Csg~G~C~~g----------~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~g----~C~C~~G~ 207 (217)
T 2p28_B 142 SIICSGLGDCVCG----------QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGF 207 (217)
T ss_dssp SCBGGGTEEEETT----------EEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEETT----EEEECTTE
T ss_pred CCCCCCCCEEeCC----------ceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeCC----eeECCCCC
Confidence 3568888999743 7999999 6899999778889765 69988 999863 89999999
Q ss_pred cCCCCc
Q psy9685 753 TGASMG 758 (979)
Q Consensus 753 ~g~~~~ 758 (979)
+|..|.
T Consensus 208 ~G~~C~ 213 (217)
T 2p28_B 208 EGSACQ 213 (217)
T ss_dssp ESTTSC
T ss_pred ccCCcC
Confidence 998764
No 86
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.75 E-value=5.7e-09 Score=99.42 Aligned_cols=80 Identities=31% Similarity=0.761 Sum_probs=65.2
Q ss_pred CCCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCccccccccCCCC--CCCCCCEE-eeCCCCcEEecCCCcc----cC
Q psy9685 600 VDIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEIDECLSN--PCMNGGQC-EDRLAGFVCNCSEEYV----GE 672 (979)
Q Consensus 600 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~~--~C~~~g~C-~~~~~~~~C~C~~G~~----G~ 672 (979)
.++++|..+||.+++.|++..++|.|.|++||.|..|+. +++|... +|.+ .| ++..++|.|.|++||+ |.
T Consensus 46 ~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~-~deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~ 122 (146)
T 1x7a_L 46 VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCEL-DATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQK 122 (146)
T ss_dssp ----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCE-ECCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSS
T ss_pred CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCC-CccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCC
Confidence 478999999999999999999999999999999999974 4889864 4554 89 8999999999999999 88
Q ss_pred cccccccccc
Q psy9685 673 RCESLRQISC 682 (979)
Q Consensus 673 ~C~~~~~~~c 682 (979)
.|+......|
T Consensus 123 ~C~~~~~~pC 132 (146)
T 1x7a_L 123 SCKPAVPFPC 132 (146)
T ss_dssp SEEECSSSCT
T ss_pred cCCCCCCCCC
Confidence 8886544333
No 87
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.75 E-value=1e-08 Score=93.51 Aligned_cols=90 Identities=28% Similarity=0.675 Sum_probs=64.3
Q ss_pred CCCCCCCCC--------CCCCCeeccCCCceeeecCCCCCCCcccccc--ccCCCCCCCCCCEEeeCCCCcEEecCCCcc
Q psy9685 601 DIDECVTHN--------CQNGARCIDGVARYSCECTPGWEGALCEKEI--DECLSNPCMNGGQCEDRLAGFVCNCSEEYV 670 (979)
Q Consensus 601 ~~~~C~~~~--------C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~--~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~ 670 (979)
|+++|...| |.+++.|++..++|.|.|++||.|..|+... ++|...+.....+|++..++|.|.|++||+
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCee
Confidence 567777777 9999999999999999999999999997543 367643322223999999999999999999
Q ss_pred ----cCccccccccccCCCCCCCCceecC
Q psy9685 671 ----GERCESLRQISCADQPCYFGAVCQD 695 (979)
Q Consensus 671 ----G~~C~~~~~~~c~~~~C~~~~~C~~ 695 (979)
|..|+. ....+|...+.|+.
T Consensus 85 ~~~~g~~C~~-----~~~~pC~~~~~~i~ 108 (114)
T 1aut_L 85 LGDDLLQCHP-----AVKFPCGRPWKRME 108 (114)
T ss_dssp ECTTSSCEEE-----CSSSCTTCCC----
T ss_pred ECCCCCccCc-----CcccCCCCCCccCC
Confidence 455653 23456766666654
No 88
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.73 E-value=2.7e-09 Score=105.86 Aligned_cols=77 Identities=35% Similarity=0.831 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCcccccc-ccCCCC--CCCCCCEEeeCCCCcEEecCCCcc----cC
Q psy9685 600 VDIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEI-DECLSN--PCMNGGQCEDRLAGFVCNCSEEYV----GE 672 (979)
Q Consensus 600 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~-~~C~~~--~C~~~g~C~~~~~~~~C~C~~G~~----G~ 672 (979)
.++++|...||.+++.|++..++|.|.|++||.|..|+..+ ++|... +|.+ .|++..++|.|.|++||+ |.
T Consensus 40 ~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~ 117 (195)
T 1nfu_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGK 117 (195)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSS
T ss_pred CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCC
Confidence 47899999999999999999999999999999999998766 789864 4654 999999999999999999 88
Q ss_pred cccccc
Q psy9685 673 RCESLR 678 (979)
Q Consensus 673 ~C~~~~ 678 (979)
.|+...
T Consensus 118 ~C~~~~ 123 (195)
T 1nfu_B 118 ACIPTG 123 (195)
T ss_dssp CEEESS
T ss_pred ccccCC
Confidence 998643
No 89
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.72 E-value=1.1e-08 Score=124.90 Aligned_cols=165 Identities=23% Similarity=0.476 Sum_probs=78.7
Q ss_pred ecCCCCCCCccccccccCCC--CCCCCCCEEeeCCCCcEE----ecCCCcccCccccccccccC---CCCCCCCceecCC
Q psy9685 626 ECTPGWEGALCEKEIDECLS--NPCMNGGQCEDRLAGFVC----NCSEEYVGERCESLRQISCA---DQPCYFGAVCQDT 696 (979)
Q Consensus 626 ~C~~G~~G~~C~~~~~~C~~--~~C~~~g~C~~~~~~~~C----~C~~G~~G~~C~~~~~~~c~---~~~C~~~~~C~~~ 696 (979)
.|..|.....|.. ..|.. ..|.+ +.|+. +.+.| .|..|..+..|.... .|. ..+|.+ +.|...
T Consensus 218 dC~dgsDE~~C~~--~~C~~~~f~C~~-g~Ci~--~~~~Cdg~~dC~dgsDE~~C~~~~--~C~~~~~~~C~~-G~Ci~~ 289 (791)
T 3m0c_C 218 DCKDKSDEENCAV--ATCRPDEFQCSD-GNCIH--GSRQCDREYDCKDMSDEVGCVNVT--LCEGPNKFKCHS-GECITL 289 (791)
T ss_dssp --------------------------------------------------------------CCSTTCCCCTT-SCCCCS
T ss_pred CCCCCCCCCCccc--cccCCCcceecC-CceEe--cceecCChhccccccccCcccccc--cccCCCccccCC-Cccccc
Confidence 4665555444531 22322 23543 46654 34456 577887777776432 232 234654 566643
Q ss_pred CCCCCCCCCCeecCCCCCCCCCccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccc
Q psy9685 697 KISPYFPQGPICDCPPGYRGSRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWE 776 (979)
Q Consensus 697 ~~~~~~~~~~~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~ 776 (979)
.. .-.+.+.|..|+.+..++.++++|..+.....+.|+++.++|.|.|++||.+.
T Consensus 290 ~~----~Cd~~~dC~dgsDe~~~~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~--------------------- 344 (791)
T 3m0c_C 290 DK----VCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLV--------------------- 344 (791)
T ss_dssp SC----CSCSSCCSSSSCSCCCTTBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEE---------------------
T ss_pred cc----ccCCccccccccCccccccccccccccccCccccccCCCCCcccCCCCCCccC---------------------
Confidence 21 11335689988876543335677775543334699999999999999987642
Q ss_pred cCCCcCCCCCCCCcCCCCCCCCCCCCCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCC
Q psy9685 777 QLGYTDTLSCPECFSLDSGPGGPGLADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDT 856 (979)
Q Consensus 777 ~~g~~~~~~C~~C~~~~~~~~~~~~~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~ 856 (979)
.|..|+ |+|||. .+..|.+ +|+|..|+|+|.|.+||
T Consensus 345 ----------------------------------------~g~~C~-dideC~-~~~~C~~--~C~n~~gsy~C~C~~Gy 380 (791)
T 3m0c_C 345 ----------------------------------------AQRRCE-DIDECQ-DPDTCSQ--LCVNLEGGYKCQCEEGF 380 (791)
T ss_dssp ----------------------------------------TTTEEE-CCCCCS-SSSSCTT--TCCBCSSCBCCCCCSSE
T ss_pred ----------------------------------------CCCccc-cCcccC-CCCCCCC--eeecCCCCceeecCCCC
Confidence 245565 899997 4567865 89999999999999999
Q ss_pred C----CCCCCCCCCC
Q psy9685 857 C----GYLCNFPDPC 867 (979)
Q Consensus 857 ~----G~~C~~~~~C 867 (979)
. +..|..++++
T Consensus 381 ~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 381 QLDPHTKACKAVGSI 395 (791)
T ss_dssp ECCSSCCCCEETTSC
T ss_pred EeCCCCceeeecccc
Confidence 5 4566655444
No 90
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.69 E-value=4.5e-09 Score=98.76 Aligned_cols=78 Identities=35% Similarity=0.819 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCcccccc-ccCCCC--CCCCCCEEeeCCCCcEEecCCCcc----cC
Q psy9685 600 VDIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEI-DECLSN--PCMNGGQCEDRLAGFVCNCSEEYV----GE 672 (979)
Q Consensus 600 ~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~-~~C~~~--~C~~~g~C~~~~~~~~C~C~~G~~----G~ 672 (979)
.++++|...||.+++.|++..++|.|.|++||.|..|+..+ ++|... +|.+ .|++..++|.|.|++||+ |.
T Consensus 40 ~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~ 117 (134)
T 2vh0_B 40 KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGK 117 (134)
T ss_dssp -----------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSS
T ss_pred CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECCCCC
Confidence 37789999999999999999999999999999999998766 788764 4654 999999999999999999 88
Q ss_pred ccccccc
Q psy9685 673 RCESLRQ 679 (979)
Q Consensus 673 ~C~~~~~ 679 (979)
.|+....
T Consensus 118 ~C~~~~~ 124 (134)
T 2vh0_B 118 ACIPTGP 124 (134)
T ss_dssp CEEESSS
T ss_pred ccCcCCC
Confidence 8886543
No 91
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.66 E-value=1.6e-08 Score=123.48 Aligned_cols=89 Identities=26% Similarity=0.513 Sum_probs=65.6
Q ss_pred ccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCC---CCCCCCCCCCCCC-CCCCCCCeeecCCCCC
Q psy9685 810 TTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDT---CGYLCNFPDPCKD-EPCQNGGTCHEDCRHQ 885 (979)
Q Consensus 810 C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~---~G~~C~~~~~C~~-~~C~~~g~C~~~c~~~ 885 (979)
+.|..|+.+..++-++++|......|.+ .|++.+++|.|.|++|| .|..|++++||.. .+|. ..|. +..
T Consensus 297 ~dC~dgsDe~~~~C~~~~C~~~~~~C~~--~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~--~~C~---n~~ 369 (791)
T 3m0c_C 297 RDCRDWSDEPIKECGTNECLDNNGGCSH--VCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCS--QLCV---NLE 369 (791)
T ss_dssp CCSSSSCSCCCTTBSCCSTTTGGGGCSS--EEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCT--TTCC---BCS
T ss_pred cccccccCccccccccccccccccCccc--cccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCC--Ceee---cCC
Confidence 3455565554322247788765667765 89999999999999999 5899999999973 3443 4666 458
Q ss_pred CCeEeecCCCCC----CCCCCcCC
Q psy9685 886 ADYKCDCLPGWT----GKNCTEVP 905 (979)
Q Consensus 886 ~~~~C~C~~G~~----G~~C~~~~ 905 (979)
++|+|.|.+||. +..|....
T Consensus 370 gsy~C~C~~Gy~l~~~~~~C~~~~ 393 (791)
T 3m0c_C 370 GGYKCQCEEGFQLDPHTKACKAVG 393 (791)
T ss_dssp SCBCCCCCSSEECCSSCCCCEETT
T ss_pred CCceeecCCCCEeCCCCceeeecc
Confidence 899999999996 46786543
No 92
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.60 E-value=2.5e-08 Score=109.28 Aligned_cols=80 Identities=33% Similarity=0.778 Sum_probs=63.3
Q ss_pred cCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCC
Q psy9685 722 NIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGL 801 (979)
Q Consensus 722 ~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~ 801 (979)
|+++|...||.++++|.+..++|+|.|++
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~--------------------------------------------------- 32 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSP--------------------------------------------------- 32 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSS---------------------------------------------------
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCC---------------------------------------------------
Confidence 67899999999999999988888888876
Q ss_pred CCCCCCccccCCCCcCCCCccccCcccccC-CCCCCCCeeeccCCCCeeecCCCCCCCC----CCCCCCCC
Q psy9685 802 ADSGPGVQTTPILGYTGEMCEIDINECELS-SDMCGNNGECINQPGDYKCACQFDTCGY----LCNFPDPC 867 (979)
Q Consensus 802 ~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~-~~~C~~~g~C~~~~gs~~C~C~~g~~G~----~C~~~~~C 867 (979)
||.|..|+.|++||... ...|.+ +|++..|+|.|.|++||.|. .|...++|
T Consensus 33 -------------g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c 88 (317)
T 3h5c_B 33 -------------GYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 88 (317)
T ss_dssp -------------SCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECCTTSSCCEECSSC
T ss_pred -------------CCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccccccccccccccc
Confidence 55666777789999753 368987 99999999999999999764 45554444
No 93
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.60 E-value=1.8e-08 Score=97.81 Aligned_cols=29 Identities=31% Similarity=0.733 Sum_probs=22.0
Q ss_pred CCCCCCeeccCC--Cceee-ecCCCCCCCccc
Q psy9685 609 NCQNGARCIDGV--ARYSC-ECTPGWEGALCE 637 (979)
Q Consensus 609 ~C~~~~~C~~~~--g~~~C-~C~~G~~G~~C~ 637 (979)
||.+++.|.... +.+.| .|+.+|.|..|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence 577778887654 56788 688888888886
No 94
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.44 E-value=1.7e-07 Score=102.56 Aligned_cols=70 Identities=29% Similarity=0.815 Sum_probs=63.2
Q ss_pred CCCCCCCCCCCCCCeeccCCCceeeecCCCCCCCccccccccCCC---CCCCCCCEEeeCCCCcEEecCCCcccC
Q psy9685 601 DIDECVTHNCQNGARCIDGVARYSCECTPGWEGALCEKEIDECLS---NPCMNGGQCEDRLAGFVCNCSEEYVGE 672 (979)
Q Consensus 601 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C~~---~~C~~~g~C~~~~~~~~C~C~~G~~G~ 672 (979)
++++|..+||.+++.|.+..+.|.|.|++||.|..|+.++++|.. .+|.+ .|.+..++|.|.|++||.|.
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 568899999999999999999999999999999999989999986 78976 99999999999999999864
No 95
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.34 E-value=3e-07 Score=70.27 Aligned_cols=43 Identities=26% Similarity=0.621 Sum_probs=35.9
Q ss_pred CCCccccCCCCCCCCCCCCceE-----ecCCCCeEEecCCCCcCCCCc
Q psy9685 716 GSRCEINIDECASGPCKNSGQC-----IDDVNAFICNCTNTATGASMG 758 (979)
Q Consensus 716 G~~C~~~~~~C~~~~C~~~g~C-----~~~~g~~~C~C~~g~~g~~~~ 758 (979)
|..|+.++++|.++||.++|+| ++..++|+|.|++||+|..|.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE 48 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ 48 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence 5678889999999999999999 466789999999999999864
No 96
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.30 E-value=4.4e-07 Score=102.72 Aligned_cols=71 Identities=31% Similarity=0.619 Sum_probs=58.7
Q ss_pred CCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCC
Q psy9685 724 DECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLAD 803 (979)
Q Consensus 724 ~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~ 803 (979)
+||...+|.+.+.|.++.++|.|.|++||.+.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~------------------------------------------------ 32 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLV------------------------------------------------ 32 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEEC------------------------------------------------
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcC------------------------------------------------
Confidence 57887788778899999999999999987652
Q ss_pred CCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCC
Q psy9685 804 SGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGY 859 (979)
Q Consensus 804 ~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~ 859 (979)
.|..|+ |+|||. ....|.+ +|+|..|+|.|.|.+||.+.
T Consensus 33 -------------~~~~C~-dideC~-~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 33 -------------AQRRCE-DIDECQ-DPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp -------------SSSCEE-ECCCCS-TTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred -------------CCCccc-Cchhhh-ccCCCCC--ccCCCccceeeecccccccc
Confidence 145675 899997 3567876 89999999999999999754
No 97
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.27 E-value=4.3e-07 Score=69.44 Aligned_cols=44 Identities=30% Similarity=0.763 Sum_probs=35.3
Q ss_pred CCccccccccCCCCCCCCCCEEe-----eCCCCcEEecCCCcccCcccc
Q psy9685 633 GALCEKEIDECLSNPCMNGGQCE-----DRLAGFVCNCSEEYVGERCES 676 (979)
Q Consensus 633 G~~C~~~~~~C~~~~C~~~g~C~-----~~~~~~~C~C~~G~~G~~C~~ 676 (979)
|..|+.++++|...||.|+|+|. +..++|.|.|++||+|.+|+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 56788888999999999999994 556789999999999999985
No 98
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.26 E-value=1.6e-07 Score=107.45 Aligned_cols=79 Identities=29% Similarity=0.666 Sum_probs=39.1
Q ss_pred ccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCCCCCeE
Q psy9685 810 TTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCNFPDPCKDEPCQNGGTCHEDCRHQADYK 889 (979)
Q Consensus 810 C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~C~~~c~~~~~~~ 889 (979)
+.|..+|.|..|+ +++|.. .|.+ |+|++. ++|.|.+||.|..|+ .+.|.. +|.++|+|.. .++
T Consensus 379 ~~C~~~~~g~~c~--~~~C~~---~C~n-G~C~~~---~~C~C~~G~~G~~C~-~~~C~~-~C~~~g~C~~------~~~ 441 (463)
T 2wg3_C 379 EECRATVQPAQTL--TSECSR---LCRN-GYCTPT---GKCCCSPGWEGDFCR-TAKCEP-ACRHGGVCVR------PNK 441 (463)
T ss_dssp GGGCCCCCCCCCC--CCHHHH---HCCS-EEECTT---SCEEECTTEESTTSC-EECC----------------------
T ss_pred ccCCCCCcCCCCc--cccccC---CCCC-CccCCC---CeECCCCCcCCCcCC-cCcCCC-CCCCCCEECC------CCE
Confidence 5677799999997 578863 4886 899864 389999999999996 467876 8999999983 269
Q ss_pred eecCCCCCCCCCCcCC
Q psy9685 890 CDCLPGWTGKNCTEVP 905 (979)
Q Consensus 890 C~C~~G~~G~~C~~~~ 905 (979)
|.|.+||+|..|+..+
T Consensus 442 C~C~~G~~G~~C~~~~ 457 (463)
T 2wg3_C 442 CLCKKGYLGPQCEQVD 457 (463)
T ss_dssp ----------------
T ss_pred EECCCCcccCCCCCCc
Confidence 9999999999998754
No 99
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.15 E-value=3.2e-07 Score=103.45 Aligned_cols=74 Identities=22% Similarity=0.709 Sum_probs=19.9
Q ss_pred cCcccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCCCCCC-CCCCCCCCeeecCCCCCCCeEeecCCCCC-
Q psy9685 824 DINECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFPDPCK-DEPCQNGGTCHEDCRHQADYKCDCLPGWT- 897 (979)
Q Consensus 824 ~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~~~C~-~~~C~~~g~C~~~c~~~~~~~C~C~~G~~- 897 (979)
|+|||...+..|.+ +|.+..|+|.|.|++||. |..|++++||. ..+|.+. |. +..++|.|.|.+||+
T Consensus 2 ~~~~C~~~~~~c~~--~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~--C~---~~~g~~~C~C~~g~~l 74 (386)
T 3v65_B 2 GEENCNVNNGGCAQ--KCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQG--CT---NSEGAFQCWCEAGYEL 74 (386)
T ss_dssp ----------------------------------------------------CCTTE--EC--------CCEECCTTEEE
T ss_pred CcCcccCCCCCCCC--CCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCc--CC---CCCCCCeEEECCCceE
Confidence 68899766667875 899999999999999997 99999999996 4578753 87 457899999999998
Q ss_pred ---CCCCCcC
Q psy9685 898 ---GKNCTEV 904 (979)
Q Consensus 898 ---G~~C~~~ 904 (979)
|..|...
T Consensus 75 ~~d~~~C~~~ 84 (386)
T 3v65_B 75 RPDRRSCKAL 84 (386)
T ss_dssp CTTSSCEEEC
T ss_pred cCCCCeECCc
Confidence 8889754
No 100
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.12 E-value=3.8e-07 Score=102.81 Aligned_cols=79 Identities=23% Similarity=0.528 Sum_probs=19.9
Q ss_pred cCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCC
Q psy9685 722 NIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGL 801 (979)
Q Consensus 722 ~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~ 801 (979)
++++|..++|.+.+.|.+..|+|+|.|++||.+..
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~--------------------------------------------- 36 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTE--------------------------------------------- 36 (386)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECC---------------------------------------------
Confidence 67899888766667999999999999999876431
Q ss_pred CCCCCCccccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCC
Q psy9685 802 ADSGPGVQTTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFP 864 (979)
Q Consensus 802 ~~~~~~~~C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~ 864 (979)
.|..| +|++||. ....|.+ .|++..|+|+|.|.+||. |..|...
T Consensus 37 ---------------~~~~C-~d~~eC~-~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~~~ 84 (386)
T 3v65_B 37 ---------------DGRTC-QDVNECA-EEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKAL 84 (386)
T ss_dssp --------------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEEEC
T ss_pred ---------------CCCcc-CccceeC-CcCcccC--cCCCCCCCCeEEECCCceEcCCCCeECCc
Confidence 25667 4899996 3568987 499999999999999996 7778643
No 101
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.03 E-value=3.9e-06 Score=59.75 Aligned_cols=36 Identities=39% Similarity=0.875 Sum_probs=33.5
Q ss_pred cCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCC
Q psy9685 722 NIDECASGPCKNSGQCIDDVNAFICNCTNTATGASM 757 (979)
Q Consensus 722 ~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~ 757 (979)
++++|...||.++|+|++..++|+|.|++||+|..|
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~C 37 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNC 37 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTS
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCcc
Confidence 688999999999999999999999999999999865
No 102
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.01 E-value=2.6e-06 Score=96.30 Aligned_cols=72 Identities=31% Similarity=0.679 Sum_probs=56.8
Q ss_pred cccccCCCCCCCCeeeccCCCCeeecCCCCCC---CCCCCCCCCCCC-CCCCCCCeeecCCCCCCCeEeecCCCCCC---
Q psy9685 826 NECELSSDMCGNNGECINQPGDYKCACQFDTC---GYLCNFPDPCKD-EPCQNGGTCHEDCRHQADYKCDCLPGWTG--- 898 (979)
Q Consensus 826 ~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~---G~~C~~~~~C~~-~~C~~~g~C~~~c~~~~~~~C~C~~G~~G--- 898 (979)
|||...+..|. ++|++.+++|.|.|++||. |..|++++||.. .+|.+ .|. +..++|.|.|.+||.+
T Consensus 1 ~eC~~~~~~c~--~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~--~C~---n~~g~~~C~C~~g~~~~~~ 73 (400)
T 3p5b_L 1 NECLDNNGGCS--HVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQ--LCV---NLEGGYKCQCEEGFQLDPH 73 (400)
T ss_dssp CCTTTTGGGCS--SEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSS--CCB---CCSSSCBCCCCTTCCCCTT
T ss_pred CcccCCCCCCC--CEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCC--ccC---CCccceeeecccccccccc
Confidence 46754444554 4999999999999999997 899999999974 56754 677 4578999999999984
Q ss_pred -CCCCcC
Q psy9685 899 -KNCTEV 904 (979)
Q Consensus 899 -~~C~~~ 904 (979)
..|...
T Consensus 74 ~~~C~~~ 80 (400)
T 3p5b_L 74 TKACKAV 80 (400)
T ss_dssp TSSCCCS
T ss_pred ccceeec
Confidence 467543
No 103
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.95 E-value=1.1e-06 Score=100.71 Aligned_cols=46 Identities=28% Similarity=0.841 Sum_probs=16.0
Q ss_pred eecCCCCCCCCCccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcCCCCc
Q psy9685 707 ICDCPPGYRGSRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATGASMG 758 (979)
Q Consensus 707 ~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~ 758 (979)
+|.|.+||+|..|+ +++|.. +|.++|+|++. ++|.|++||+|..|+
T Consensus 409 ~C~C~~G~~G~~C~--~~~C~~-~C~~~g~C~~~---~~C~C~~G~~G~~C~ 454 (463)
T 2wg3_C 409 KCCCSPGWEGDFCR--TAKCEP-ACRHGGVCVRP---NKCLCKKGYLGPQCE 454 (463)
T ss_dssp CEEECTTEESTTSC--EECC--------------------------------
T ss_pred eECCCCCcCCCcCC--cCcCCC-CCCCCCEECCC---CEEECCCCcccCCCC
Confidence 79999999999996 578987 89999999865 589999999998764
No 104
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.88 E-value=8.9e-06 Score=57.82 Aligned_cols=36 Identities=44% Similarity=1.114 Sum_probs=23.5
Q ss_pred cccCCCCCCCCCCEEeeCCCCcEEecCCCcccCccc
Q psy9685 640 IDECLSNPCMNGGQCEDRLAGFVCNCSEEYVGERCE 675 (979)
Q Consensus 640 ~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~ 675 (979)
+++|...||.++++|++..++|.|.|++||+|..|+
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 455666666666666666666666666666666664
No 105
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=97.78 E-value=0.00055 Score=66.30 Aligned_cols=109 Identities=10% Similarity=0.093 Sum_probs=76.7
Q ss_pred eeEEEEEEEEeCCCCeE-EEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEEEEEEeCCcceE-E--eecCeeecCCC
Q psy9685 95 NIVDISMFIRTRQLRGA-IFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPES-Y--NVGGVKLADGN 170 (979)
Q Consensus 95 ~~~~isl~FrT~~~~Gl-Lly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~~~~~~g~~~~~-~--~~~~~~lnDg~ 170 (979)
...+|.|+||+..+... ||-..+ ......|+.|.|.+|.+.+.+.-.++... . ......++ ++
T Consensus 40 ~~gTI~v~fks~~~~~q~LfSIsN------------~k~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~~-~~ 106 (191)
T 2v73_A 40 EEGTIVTRFNMNDTSIQSLIGLSD------------GNKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFN-RG 106 (191)
T ss_dssp SSEEEEEEEEECCCSCEEEEEEEC------------TTCSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCCC-SS
T ss_pred CCcEEEEEEecCCCcceEEEEccC------------CCCccceEEEEEeCCEEEEEEecCCCceeeeeecccceecC-Cc
Confidence 67899999999984433 343332 12256799999999999888877444322 1 22323344 49
Q ss_pred cEEEEEEEEc-eEEEEEECCEEeEEEecC---cccccccceeEEcCCCCc
Q psy9685 171 NHLIQVVRNV-TLVQVKLNGTEYFRKTIS---STGILDVQVLYLGGIPET 216 (979)
Q Consensus 171 WH~V~v~r~~-~~~~L~VD~~~~~~~~~~---~~~~l~~~~lyvGG~p~~ 216 (979)
||+|.+..+. ...+|.|||..+...... ....++++.|.|||....
T Consensus 107 wntvaf~~d~~~~~~ly~NG~~V~t~~~~~~~fi~~i~ln~~~IG~~~r~ 156 (191)
T 2v73_A 107 INTLALKIEKGIGAKIFLNGSLVKTVSDPNIKFLNAINLNSGFIGKTDRA 156 (191)
T ss_dssp CEEEEEEEETTTEEEEEETTEEEEEEECTTCCCGGGSCCCEEEESSCCCC
T ss_pred eEEEEEEEcCCccEEEEECCEEEEEEecccccceeecCCceEEEcceeec
Confidence 9999999986 589999999988777542 233336779999998764
No 106
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=97.71 E-value=0.00047 Score=69.60 Aligned_cols=110 Identities=13% Similarity=0.099 Sum_probs=76.2
Q ss_pred eeEEEEEEEEeC-CCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeC--cEEEEEEEeCCcceEEeecCeeecCCCc
Q psy9685 95 NIVDISMFIRTR-QLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA--GELFVRLQFNSTPESYNVGGVKLADGNN 171 (979)
Q Consensus 95 ~~~~isl~FrT~-~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~--G~l~~~~~~g~~~~~~~~~~~~lnDg~W 171 (979)
..|.|.+.||.. ...|.||---+. .....++.|++.. ..|.|.|+..+....+......+.||+|
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~------------~~~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f~~v~l~dg~W 129 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERK------------DHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQW 129 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEET------------TSSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSE
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcC------------CCCEEEEEEEEcCCCCEEEEEEcCCCCEEEEEEeccccCCCcE
Confidence 788999999955 566777743321 1125689999864 3789999765554444445567999999
Q ss_pred EEEEEEEEceEEEEEECCEEeEEEecC--cccccc-c---c-eeEEcCCCCc
Q psy9685 172 HLIQVVRNVTLVQVKLNGTEYFRKTIS--STGILD-V---Q-VLYLGGIPET 216 (979)
Q Consensus 172 H~V~v~r~~~~~~L~VD~~~~~~~~~~--~~~~l~-~---~-~lyvGG~p~~ 216 (979)
|+|.+.-.+..++|.||-......... ...+++ . . .+|||-....
T Consensus 130 H~l~l~V~~~~v~L~vDC~~~~~~~l~~~~~~~~~~~~~~~~~~~iGq~~~~ 181 (209)
T 2erf_A 130 KSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN 181 (209)
T ss_dssp EEEEEEEETTEEEEEETTTEEEEEECSSCGGGTCCTTHHHHEEEEESCCTTT
T ss_pred EEEEEEEECCEEEEEEcCeEeEeEEccCCchhccccccCCceEEEEecCCCC
Confidence 999999999999999998876554432 223321 1 3 8899976543
No 107
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.68 E-value=1.6e-05 Score=87.57 Aligned_cols=59 Identities=24% Similarity=0.545 Sum_probs=0.0
Q ss_pred CcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCCCCCCeEeecCC
Q psy9685 815 GYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCNFPDPCKDEPCQNGGTCHEDCRHQADYKCDCLP 894 (979)
Q Consensus 815 g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~C~~~c~~~~~~~C~C~~ 894 (979)
++.|..|+.+ ...|.++|+|.+.. +|.|++||.|..|+. ..|.++|+|.. .+++|.=+.
T Consensus 360 n~~g~~CD~~-------t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~------c~C~~~g~C~~-----~~Gqc~~~~ 418 (426)
T 3zyj_B 360 SIGTNVCDNE-------LLHCQNGGTCHNNV---RCLCPAAYTGILCEK------LRCEEAGSCGS-----DSGQGAPPH 418 (426)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcCccccC-------cccCCCCCCcCCCC---CCcCCCCCcCCCCcC------CCCCCCCcccC-----CCCccCCCC
Confidence 4456777633 34677888998765 999999999998863 35788888873 345565443
No 108
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.67 E-value=5.8e-06 Score=64.65 Aligned_cols=42 Identities=24% Similarity=0.517 Sum_probs=33.9
Q ss_pred cCcccccCCCCCCCC--eeeccCCCCeeecCCCCCC-CCCCCCCCCC
Q psy9685 824 DINECELSSDMCGNN--GECINQPGDYKCACQFDTC-GYLCNFPDPC 867 (979)
Q Consensus 824 ~~~~C~~~~~~C~~~--g~C~~~~gs~~C~C~~g~~-G~~C~~~~~C 867 (979)
++|+|. ..+|.++ |+|++..++|.|.|++||. |..|+..++|
T Consensus 10 ~~d~C~--snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~~~C 54 (61)
T 2k2s_B 10 TPAACS--SNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGNVTC 54 (61)
T ss_dssp SCCHHH--HCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSCEEE
T ss_pred CCCcCc--CCCCcCCCccccccCCCceEeECCCCCccCCCCCCCCEe
Confidence 578886 3568887 7999999999999999999 9988765444
No 109
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.59 E-value=5e-05 Score=57.96 Aligned_cols=37 Identities=27% Similarity=0.738 Sum_probs=32.9
Q ss_pred cCCCCCCC---CCCCCceEe--cCCCCeEEecCCCCcCCCCc
Q psy9685 722 NIDECASG---PCKNSGQCI--DDVNAFICNCTNTATGASMG 758 (979)
Q Consensus 722 ~~~~C~~~---~C~~~g~C~--~~~g~~~C~C~~g~~g~~~~ 758 (979)
++++|... ||.++|+|+ +..++|+|.|++||+|..|.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 43 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCC
Confidence 57889876 999999999 88999999999999998753
No 110
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.56 E-value=8.6e-06 Score=63.68 Aligned_cols=45 Identities=29% Similarity=0.699 Sum_probs=38.1
Q ss_pred CCCCCCCCCCCCCCCC--CeeecCCCCCCCeEeecCCCCC-CCCCCcCCCc
Q psy9685 860 LCNFPDPCKDEPCQNG--GTCHEDCRHQADYKCDCLPGWT-GKNCTEVPEY 907 (979)
Q Consensus 860 ~C~~~~~C~~~~C~~~--g~C~~~c~~~~~~~C~C~~G~~-G~~C~~~~~~ 907 (979)
.|+.+++|..+||.++ |+|. +..++|.|.|++||+ |.+|+...++
T Consensus 7 ~~~~~d~C~snPC~nga~gtC~---~~~g~y~C~C~~Gy~~G~~C~~~~~C 54 (61)
T 2k2s_B 7 LSETPAACSSNPCGPEAAGTCK---ETNSGYICRCNQGYRISLDGTGNVTC 54 (61)
T ss_dssp CTTSCCHHHHCSSCSSSCCEEE---ECSSEEEEECCTTEEEEECSSSCEEE
T ss_pred hcCCCCcCcCCCCcCCCccccc---cCCCceEeECCCCCccCCCCCCCCEe
Confidence 4667889999999998 8999 457889999999999 9999875543
No 111
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.54 E-value=4.2e-05 Score=84.24 Aligned_cols=33 Identities=30% Similarity=0.722 Sum_probs=0.0
Q ss_pred CCCCCccccCCCCCCCCCCCCceEecCCCCeEEecCCCCcC
Q psy9685 714 YRGSRCEINIDECASGPCKNSGQCIDDVNAFICNCTNTATG 754 (979)
Q Consensus 714 ~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~g~~g 754 (979)
+.|..|+.+. .+|.++|+|.+.. +|.|++||+|
T Consensus 361 ~~g~~CD~~t-----~~C~ngg~C~~~~---~C~C~~G~~G 393 (426)
T 3zyj_B 361 IGTNVCDNEL-----LHCQNGGTCHNNV---RCLCPAAYTG 393 (426)
T ss_dssp -----------------------------------------
T ss_pred CCcCccccCc-----ccCCCCCCcCCCC---CCcCCCCCcC
Confidence 4455665322 3566667776543 5666654444
No 112
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=97.54 E-value=0.00095 Score=68.94 Aligned_cols=130 Identities=12% Similarity=0.131 Sum_probs=85.6
Q ss_pred cccccccccCCCeeEEEEeCccccccceeeEEEEEEEE-eCCCCe---EEEEecCCCCCCCCCCCCCCCCCCCEEEEEEe
Q psy9685 67 TAATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIR-TRQLRG---AIFYLGGSGDRSSPSSNGAGSEETSYIAAEME 142 (979)
Q Consensus 67 ~a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~Fr-T~~~~G---lLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~ 142 (979)
.|++|+. ...+..+.....+..+...|.|.+.|| .....+ .||---+ ..+..++.|.|.
T Consensus 62 ~Ay~l~~----~a~l~~pt~~~fP~glp~eFsil~tlr~~~~~~~~~~~L~sI~d-------------~~~~~qlgv~l~ 124 (245)
T 2uur_A 62 VAYKLGN----NVDFRIPTRNLYPSGLPEEYSFLTTFRMTGSTLKKNWNIWQIQD-------------SSGKEQVGIKIN 124 (245)
T ss_dssp EEEEECS----SCCCEEEHHHHCTTCCCSSEEEEEEEECCGGGGGCEEEEEEEEC-------------TTSCEEEEEEEE
T ss_pred eeEEecC----ccccccchhHhccccCCCCEEEEEEEEcCCCCCCcceEEEEEEC-------------CCCcEEEEEEEc
Confidence 3667765 466777765556656778899999999 444443 2444332 114568999997
Q ss_pred --CcEEEEEEEeCCc-ceEEeecCe-eecCCCcEEEEEEEEceEEEEEECCEEeEEEecCcccccccc-eeEEcCC
Q psy9685 143 --AGELFVRLQFNST-PESYNVGGV-KLADGNNHLIQVVRNVTLVQVKLNGTEYFRKTISSTGILDVQ-VLYLGGI 213 (979)
Q Consensus 143 --~G~l~~~~~~g~~-~~~~~~~~~-~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~~~~~~l~~~-~lyvGG~ 213 (979)
+..|.|.+....+ ...+..... ++.||+||+|.+.-.+..++|.||=.............++.. .++||-.
T Consensus 125 g~~~~l~~~y~~~~g~~q~v~F~~~~~L~Dg~WHklalsV~~~~VtLyvDC~~~~~~~l~~~~~i~~~G~~~lG~~ 200 (245)
T 2uur_A 125 GQTQSVVFSYKGLDGSLQTAAFSNLSSLFDSQWHKIMIGVERSSATLFVDCNRIESLPIKPRGPIDIDGFAVLGKL 200 (245)
T ss_dssp GGGTEEEEEEEBTTSCEEEEEECCCGGGCSSSCEEEEEEEETTEEEEEETTEEEEEEECCCBCCCCCSSEEEEEEE
T ss_pred CCCCEEEEEecCCCCCeeEEEecCCccccCCCEEEEEEEEECCEEEEEEecCcccccccCCCCccccCCEEEEEEe
Confidence 4467777755433 333333432 589999999999999999999999887655443332333444 7777765
No 113
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=97.53 E-value=0.001 Score=69.07 Aligned_cols=110 Identities=13% Similarity=0.095 Sum_probs=74.7
Q ss_pred eeEEEEEEEEeC-CCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeC--cEEEEEEEeCCcceEEeecCeeecCCCc
Q psy9685 95 NIVDISMFIRTR-QLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA--GELFVRLQFNSTPESYNVGGVKLADGNN 171 (979)
Q Consensus 95 ~~~~isl~FrT~-~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~--G~l~~~~~~g~~~~~~~~~~~~lnDg~W 171 (979)
..|.|.+.||.. ...|.||.--+. .....++.|.+.. ..|.|.|...++...+......+.||+|
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~------------~g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f~~~~L~Dg~W 139 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERK------------DHSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQW 139 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEET------------TSSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSC
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeC------------CCCEEEEEEEECCCCcEEEEEEEcCCCeeeEEEecccccCCCE
Confidence 788999999965 455788743321 0024577777643 4788999766554444444568999999
Q ss_pred EEEEEEEEceEEEEEECCEEeEEEec-C-cccccc-c---c-eeEEcCCCCc
Q psy9685 172 HLIQVVRNVTLVQVKLNGTEYFRKTI-S-STGILD-V---Q-VLYLGGIPET 216 (979)
Q Consensus 172 H~V~v~r~~~~~~L~VD~~~~~~~~~-~-~~~~l~-~---~-~lyvGG~p~~ 216 (979)
|+|.+.-.+..++|.||-........ . ...+++ . . .++||-....
T Consensus 140 H~lalsV~~~~VtLyvDC~~~~~~~l~~~~~~i~~~~~~~~~~~~iGq~~~~ 191 (251)
T 1za4_A 140 KSITLFVQEDRAQLYIDCEKMENAELDVPIQSVFTRDLASIARLRIAKGGVN 191 (251)
T ss_dssp EEEEEEEETTEEEEEETTSCCEEEECSSCGGGTSCTTGGGTEEEEESCCSTT
T ss_pred EEEEEEEECCEEEEEECCcccceeeccCccccccccccCCCcEEEEEecCCC
Confidence 99999999999999999987655433 2 223321 1 3 7899976543
No 114
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.51 E-value=8.6e-05 Score=56.66 Aligned_cols=37 Identities=41% Similarity=1.042 Sum_probs=22.8
Q ss_pred cccCCCC---CCCCCCEEe--eCCCCcEEecCCCcccCcccc
Q psy9685 640 IDECLSN---PCMNGGQCE--DRLAGFVCNCSEEYVGERCES 676 (979)
Q Consensus 640 ~~~C~~~---~C~~~g~C~--~~~~~~~C~C~~G~~G~~C~~ 676 (979)
+++|... ||.++|+|+ +..++|.|.|++||+|..|+.
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 4455544 666666666 455666666666666666653
No 115
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.39 E-value=1.3e-05 Score=60.89 Aligned_cols=45 Identities=22% Similarity=0.448 Sum_probs=32.9
Q ss_pred eeecCCCCCCCCCCCCCCCCCCCCCCCCCeeecCCC-CCCCeEeecCCCCCCCCCCc
Q psy9685 848 YKCACQFDTCGYLCNFPDPCKDEPCQNGGTCHEDCR-HQADYKCDCLPGWTGKNCTE 903 (979)
Q Consensus 848 ~~C~C~~g~~G~~C~~~~~C~~~~C~~~g~C~~~c~-~~~~~~C~C~~G~~G~~C~~ 903 (979)
++|.|++||. .+||.|+|+|...-. ..++|.|.|++||+|.+|+.
T Consensus 3 ~~C~C~~g~~-----------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFD-----------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CCBCCCHHHH-----------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeeECCCCCc-----------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 3688888886 347888999983100 23468999999999999975
No 116
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.36 E-value=0.00014 Score=53.41 Aligned_cols=29 Identities=31% Similarity=0.952 Sum_probs=14.1
Q ss_pred CCCCCCeec--cCCCceeeecCCCCCCCccc
Q psy9685 609 NCQNGARCI--DGVARYSCECTPGWEGALCE 637 (979)
Q Consensus 609 ~C~~~~~C~--~~~g~~~C~C~~G~~G~~C~ 637 (979)
||.++++|. +..+.|.|.|++||+|..|+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCC
Confidence 455555554 33444555555555555444
No 117
>2erf_A Thrombospondin-1; TSP-1, N-terminal TSPN, HBD, sugar binding protein; 1.45A {Homo sapiens} SCOP: b.29.1.4 PDB: 2es3_A 1z78_A
Probab=97.31 E-value=0.003 Score=63.72 Aligned_cols=84 Identities=17% Similarity=0.168 Sum_probs=58.4
Q ss_pred ceeEEEEEEEec-cCCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEec--CEEEEEEEcCCcCceeeecCeeecCCCe
Q psy9685 292 NIVDISMFIRTR-QLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA--GELFVRLQFNSTPESYNVGGVKLADGNN 368 (979)
Q Consensus 292 ~~~~is~~frT~-~~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~--G~l~~~~~~g~~~~~~~~~~~~l~DG~w 368 (979)
.+|.|.+.||.. ...|.||.+.... ....++.|.+.. ..|.+.|...++...+......+.||+|
T Consensus 62 ~eFsi~~t~r~~~~~~~~LfsI~~~~------------~~~~ql~l~l~g~~~~l~~~y~~~g~~~~~~f~~v~l~dg~W 129 (209)
T 2erf_A 62 KGFLLLASLRQMKKTRGTLLALERKD------------HSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQW 129 (209)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETT------------SSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSE
T ss_pred CCEEEEEEEEcCCCCCceEEEEEcCC------------CCEEEEEEEEcCCCCEEEEEEcCCCCEEEEEEeccccCCCcE
Confidence 678899999964 5668888775431 125788888853 3688888554444334345567999999
Q ss_pred eEEEEEeecceeeeEEEEEccC
Q psy9685 369 HLIQTISSTGILDVQVLYLGGI 390 (979)
Q Consensus 369 H~V~~~~~~~~l~l~vlyvGG~ 390 (979)
|+|.+...+..+. ||++.-
T Consensus 130 H~l~l~V~~~~v~---L~vDC~ 148 (209)
T 2erf_A 130 KSITLFVQEDRAQ---LYIDCE 148 (209)
T ss_dssp EEEEEEEETTEEE---EEETTT
T ss_pred EEEEEEEECCEEE---EEEcCe
Confidence 9999999887644 555543
No 118
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.30 E-value=0.00016 Score=53.07 Aligned_cols=35 Identities=37% Similarity=0.893 Sum_probs=30.0
Q ss_pred cCCCC---CCCCCCEEe--eCCCCcEEecCCCcccCcccc
Q psy9685 642 ECLSN---PCMNGGQCE--DRLAGFVCNCSEEYVGERCES 676 (979)
Q Consensus 642 ~C~~~---~C~~~g~C~--~~~~~~~C~C~~G~~G~~C~~ 676 (979)
+|... ||.++|+|+ +..++|.|.|++||+|.+|+.
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 45555 899999998 567889999999999999974
No 119
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.29 E-value=2.4e-05 Score=59.46 Aligned_cols=41 Identities=27% Similarity=0.807 Sum_probs=29.4
Q ss_pred eeecCCCCCCCccccccccCCCCCCCCCCEEee----CCCCcEEecCCCcccCcccc
Q psy9685 624 SCECTPGWEGALCEKEIDECLSNPCMNGGQCED----RLAGFVCNCSEEYVGERCES 676 (979)
Q Consensus 624 ~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~----~~~~~~C~C~~G~~G~~C~~ 676 (979)
.|.|++||. .+||.|+|+|+. ..++|.|.|++||+|.+|+.
T Consensus 4 ~C~C~~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 4 TYKCPETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CBCCCHHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeECCCCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 467777664 346778888875 34567888888888888874
No 120
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=97.27 E-value=0.0043 Score=63.02 Aligned_cols=123 Identities=14% Similarity=0.109 Sum_probs=73.9
Q ss_pred CCCeeEEEEeCccccccceeeEEEEEEEEeCC-CCeEEE-EecCCCCCCCCCCCCCCCCCCCEEEEEEe-C--cEEEEEE
Q psy9685 76 TTNSLVTVAVGGVARRAVRNIVDISMFIRTRQ-LRGAIF-YLGGSGDRSSPSSNGAGSEETSYIAAEME-A--GELFVRL 150 (979)
Q Consensus 76 ~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~-~~GlLl-y~~~~~~~~~~~~~~~~~~~~dfi~l~L~-~--G~l~~~~ 150 (979)
+..+|+.+...... +--..++|++.+|+.. ..+.|| |... ...+-|.|... + |...+.+
T Consensus 15 s~~~yv~l~~~~~~--p~l~~fTvc~wv~~~~~~~~~lfSy~~~--------------~~~n~l~l~~~~~~~g~~~~~l 78 (217)
T 3flp_A 15 QNPKFPHLRFMQTL--PAVRQLTVCQRIKPFHRNTGYIFSCATS--------------NQDNQFITSMYVKSDGTLNLGL 78 (217)
T ss_dssp BTTBCCEEEESSCB--CCBSEEEEEEEEEESCSSCEEEEEEEET--------------TEEEEEEEEEEECTTSEEEEEE
T ss_pred CCCCEEEEecCCCC--CCCccEEEEEEEEecCCCCeeEEEEECC--------------CCCceEEEEEeCCCCcceEEEE
Confidence 45688888752111 1126799999999554 445566 4331 02345666654 2 4444555
Q ss_pred EeCCcceEEeecCeeecCCCcEEEEEEEEc--eEEEEEECCEEeEEEec-Ccccccccc-eeEEcCCC
Q psy9685 151 QFNSTPESYNVGGVKLADGNNHLIQVVRNV--TLVQVKLNGTEYFRKTI-SSTGILDVQ-VLYLGGIP 214 (979)
Q Consensus 151 ~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~--~~~~L~VD~~~~~~~~~-~~~~~l~~~-~lyvGG~p 214 (979)
..++...........++||+||+|.++.+. ..++|.|||........ .....+... .+.||.-.
T Consensus 79 ~i~g~~~~~~~~~~~~~~g~W~Hv~~t~d~~~G~~~lYvdG~~~~~~~~~~~g~~i~~~g~l~lG~~~ 146 (217)
T 3flp_A 79 QVNASSNKYISCPIEIELGQWYHVCHVWSGVDGRMAVYANGSPCGTMENVGKGHQISAGGTVVIGQEQ 146 (217)
T ss_dssp EETTCCCEEEEEEEECCTTSCEEEEEEEETTTTEEEEEETTEEEEEESCSSTTCCBCSCBEEEESSCC
T ss_pred EECCccceeEEcccccCCCCEEEEEEEEECCCCEEEEEECCEEecceeccccCcEECCCCEEEeCCcc
Confidence 554443222223467999999999999997 47899999988755332 222222233 78888743
No 121
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.27 E-value=0.00013 Score=53.60 Aligned_cols=36 Identities=39% Similarity=0.725 Sum_probs=30.2
Q ss_pred cCCCCCC---CCCCCCceEecCC--CCeEEecCCCCcCCCCc
Q psy9685 722 NIDECAS---GPCKNSGQCIDDV--NAFICNCTNTATGASMG 758 (979)
Q Consensus 722 ~~~~C~~---~~C~~~g~C~~~~--g~~~C~C~~g~~g~~~~ 758 (979)
++++|.. +||.+ |+|.... ++|.|.|++||+|..|.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCC
Confidence 5678887 89999 8998744 68999999999998763
No 122
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.24 E-value=0.00014 Score=53.42 Aligned_cols=36 Identities=39% Similarity=0.863 Sum_probs=27.6
Q ss_pred cccCCC---CCCCCCCEEeeCC--CCcEEecCCCcccCcccc
Q psy9685 640 IDECLS---NPCMNGGQCEDRL--AGFVCNCSEEYVGERCES 676 (979)
Q Consensus 640 ~~~C~~---~~C~~~g~C~~~~--~~~~C~C~~G~~G~~C~~ 676 (979)
+++|.. +||.+ |+|.... ++|.|.|++||+|.+|+.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 456766 78888 7888643 578899999998888874
No 123
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.24 E-value=9.6e-05 Score=58.76 Aligned_cols=34 Identities=29% Similarity=0.645 Sum_probs=26.8
Q ss_pred CCCCCCCCCCCCceEec-----CCCCeEEecCCCCcCCC
Q psy9685 723 IDECASGPCKNSGQCID-----DVNAFICNCTNTATGAS 756 (979)
Q Consensus 723 ~~~C~~~~C~~~g~C~~-----~~g~~~C~C~~g~~g~~ 756 (979)
.++|.++||.++|+|++ ..++|+|.|++||+|..
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~ 44 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR 44 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTT
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCc
Confidence 46788889999999986 56788999987655543
No 124
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.23 E-value=0.00011 Score=58.47 Aligned_cols=43 Identities=33% Similarity=0.760 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCeecc-----CCCceeeecCCCCCCCccccccccCCC
Q psy9685 603 DECVTHNCQNGARCID-----GVARYSCECTPGWEGALCEKEIDECLS 645 (979)
Q Consensus 603 ~~C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~G~~C~~~~~~C~~ 645 (979)
++|...||.++++|++ ..+.|.|.|++||.|..|+.++++|..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 5677788888888875 557788888888888888877776643
No 125
>1za4_A Thrombospondin 1; TSP-1, NTSP-1, HBD, arixtra, cell adhesion; HET: SGN; 1.90A {Homo sapiens} SCOP: b.29.1.4 PDB: 2ouh_A 2ouj_A
Probab=97.07 E-value=0.0056 Score=63.43 Aligned_cols=86 Identities=16% Similarity=0.145 Sum_probs=58.4
Q ss_pred ceeEEEEEEEecc-CCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEec--CEEEEEEEcCCcCceeeecCeeecCCCe
Q psy9685 292 NIVDISMFIRTRQ-LRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA--GELFVRLQFNSTPESYNVGGVKLADGNN 368 (979)
Q Consensus 292 ~~~~is~~frT~~-~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~--G~l~~~~~~g~~~~~~~~~~~~l~DG~w 368 (979)
.+|.|.+.||... ..|.||.+.... ....++.|.+.. ..|.+.|...++...+......|.||+|
T Consensus 72 ~eFsil~tlr~~~~~~g~LfsI~~~~------------g~~~ql~l~~~G~~~~l~~~Y~~~g~~~~~~f~~~~L~Dg~W 139 (251)
T 1za4_A 72 KGFLLLASLRQMKKTRGTLLALERKD------------HSGQVFSVVSNGKAGTLDLSLTVQGKQHVVSVEEALLATGQW 139 (251)
T ss_dssp TEEEEEEEEEECTTCEEEEEEEEETT------------SSCEEEEEEEETTTTEEEEEEEETTEEEEEEESSCCCCSSSC
T ss_pred CcEEEEEEEEecCCCCeEEEEEEeCC------------CCEEEEEEEECCCCcEEEEEEEcCCCeeeEEEecccccCCCE
Confidence 6788999999754 567998775431 023566666532 3688888655544334445678999999
Q ss_pred eEEEEEeecceeeeEEEEEccCCC
Q psy9685 369 HLIQTISSTGILDVQVLYLGGIPE 392 (979)
Q Consensus 369 H~V~~~~~~~~l~l~vlyvGG~p~ 392 (979)
|+|.+...+..+ .|||+.-+.
T Consensus 140 H~lalsV~~~~V---tLyvDC~~~ 160 (251)
T 1za4_A 140 KSITLFVQEDRA---QLYIDCEKM 160 (251)
T ss_dssp EEEEEEEETTEE---EEEETTSCC
T ss_pred EEEEEEEECCEE---EEEECCccc
Confidence 999999988763 477776553
No 126
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.02 E-value=0.00015 Score=55.75 Aligned_cols=41 Identities=22% Similarity=0.519 Sum_probs=33.7
Q ss_pred cccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCCCCCC
Q psy9685 826 NECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFPDPCK 868 (979)
Q Consensus 826 ~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~~~C~ 868 (979)
|||...+..|.+ .|+|++|+|.|.|++||. |..|.++++|.
T Consensus 2 dEC~~~~~~C~~--~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcCc--EeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 577655667865 899999999999999994 77898888874
No 127
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.00 E-value=0.00018 Score=57.97 Aligned_cols=44 Identities=20% Similarity=0.356 Sum_probs=37.5
Q ss_pred ccCcccccCCCCCCCCeeeccCCC-CeeecCCCCC----CCCCCCCCCCCC
Q psy9685 823 IDINECELSSDMCGNNGECINQPG-DYKCACQFDT----CGYLCNFPDPCK 868 (979)
Q Consensus 823 ~~~~~C~~~~~~C~~~g~C~~~~g-s~~C~C~~g~----~G~~C~~~~~C~ 868 (979)
+|++||...+..|.+ .|++++| +|.|.|++|| .|..|.++++|.
T Consensus 3 ~d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCCCcCC--EeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 478999877778977 8999999 8999999999 578898888874
No 128
>2uur_A Collagen alpha-1(IX) chain; glycoprotein, hydroxylation, structural protein, NC4, collagen IX, polymorphism, extracellular matrix; 1.8A {Homo sapiens}
Probab=96.99 E-value=0.0064 Score=62.70 Aligned_cols=80 Identities=10% Similarity=-0.012 Sum_probs=53.3
Q ss_pred ccceeEEEEEEE-eccCC---eEEEEecCCCCCCCCCCCCCCCCccceEEEEEec--CEEEEEEEcCCcCceeeecCe--
Q psy9685 290 VRNIVDISMFIR-TRQLR---GAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA--GELFVRLQFNSTPESYNVGGV-- 361 (979)
Q Consensus 290 ~~~~~~is~~fr-T~~~~---GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~--G~l~~~~~~g~~~~~~~~~~~-- 361 (979)
...++.|.+.|| ..... +.||.+-.. ++..++.|.+.. ..|.+.|....|......-..
T Consensus 84 lp~eFsil~tlr~~~~~~~~~~~L~sI~d~-------------~~~~qlgv~l~g~~~~l~~~y~~~~g~~q~v~F~~~~ 150 (245)
T 2uur_A 84 LPEEYSFLTTFRMTGSTLKKNWNIWQIQDS-------------SGKEQVGIKINGQTQSVVFSYKGLDGSLQTAAFSNLS 150 (245)
T ss_dssp CCSSEEEEEEEECCGGGGGCEEEEEEEECT-------------TSCEEEEEEEEGGGTEEEEEEEBTTSCEEEEEECCCG
T ss_pred CCCCEEEEEEEEcCCCCCCcceEEEEEECC-------------CCcEEEEEEEcCCCCEEEEEecCCCCCeeEEEecCCc
Confidence 456788889999 44443 347777442 245688898874 457777755544433322233
Q ss_pred eecCCCeeEEEEEeecceeee
Q psy9685 362 KLADGNNHLIQTISSTGILDV 382 (979)
Q Consensus 362 ~l~DG~wH~V~~~~~~~~l~l 382 (979)
.+.||+||+|.+...+..+.|
T Consensus 151 ~L~Dg~WHklalsV~~~~VtL 171 (245)
T 2uur_A 151 SLFDSQWHKIMIGVERSSATL 171 (245)
T ss_dssp GGCSSSCEEEEEEEETTEEEE
T ss_pred cccCCCEEEEEEEEECCEEEE
Confidence 589999999999999987655
No 129
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=96.95 E-value=0.0099 Score=59.60 Aligned_cols=124 Identities=13% Similarity=0.072 Sum_probs=73.1
Q ss_pred cccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCC-CeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEE-eCcEE
Q psy9685 69 ATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQL-RGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEM-EAGEL 146 (979)
Q Consensus 69 ~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~-~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L-~~G~l 146 (979)
..|..+ +..+|+.+....+. . -..|+|.+.+||... .+.||-.+.. . ...-|.|.. ..|.+
T Consensus 9 l~Fp~~-s~~~yv~l~~~~~~--~-l~~fTvc~wv~~~~~~~~tlfSy~~~------------~-~~nel~l~~~~~~~~ 71 (204)
T 3kqr_A 9 FVFPRE-SVTDHVNLITPLEK--P-LQNFTLCFRAYSDLSRAYSLFSYNTQ------------G-RDNELLVYKERVGEY 71 (204)
T ss_dssp EEECSC-CSSCEEEEECCCCS--C-BSEEEEEEEEECCCCSCEEEEEEEET------------T-EEEEEEEEEEETTEE
T ss_pred EEcCCC-CCCCEEEEeCCCCC--C-cCCEEEEEEEEeCCCCCeEEEEEECC------------C-CCceEEEEEcCCCeE
Confidence 345442 45688888763211 1 278999999998763 4555533320 0 122344444 46777
Q ss_pred EEEEEeCCcceEEeecCeeecCCCcEEEEEEEEc--eEEEEEECCEEeEEEecCcccccccc-eeEEcCCC
Q psy9685 147 FVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNV--TLVQVKLNGTEYFRKTISSTGILDVQ-VLYLGGIP 214 (979)
Q Consensus 147 ~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~--~~~~L~VD~~~~~~~~~~~~~~l~~~-~lyvGG~p 214 (979)
.|.+ ++... ... .+++||+||+|-++.+. ..+.|.|||.............+... .+.||.-.
T Consensus 72 ~l~i--~g~~~--~~~-~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~~~g~~i~~~g~l~lGq~q 137 (204)
T 3kqr_A 72 SLYI--GRHKV--TSK-VIEKFPAPVHICVSWESSSGIAEFWINGTPLVKKGLRQGYFVEAQPKIVLGQEQ 137 (204)
T ss_dssp EEEE--TTEEE--EEE-CCCCSSCCEEEEEEEETTTCEEEEEETTEECCCEECCTTCCBCSSCEEEESSCC
T ss_pred EEEE--CCeEE--EEe-cccCCCceEEEEEEEECCCCeEEEEECCEEeeeeccCCCCEECCCcEEEEcccc
Confidence 6665 43322 222 57899999999999996 47899999987643322222222223 67777643
No 130
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=96.93 E-value=0.0083 Score=60.31 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=74.3
Q ss_pred ccccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCC---CeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEe-C
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQL---RGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEME-A 143 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~---~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~-~ 143 (979)
+..|..+ +..+|+.+...... + -..|+|.+.+||... ++.||-.+.. ....-|.|.+. +
T Consensus 8 ~l~Fp~~-s~~~yv~l~~~~~~--~-l~~fTvc~wv~~~~~~~~~~~lfSy~~~-------------~~~n~l~l~~~~~ 70 (206)
T 3pvn_A 8 AFVFPKE-SDTSYVSLKAPLTK--P-LKAFTVCLHFYTELSSTRGYSIFSYATK-------------RQDNEILIFWSKD 70 (206)
T ss_dssp EEEECSC-CSSCEEEECCCCCS--C-BSEEEEEEEEEESGGGTCCEEEEEEEET-------------TEEEEEEEEEETT
T ss_pred EEEcCCC-CCCCEEEEecCCCC--C-cCCEEEEEEEEecCCCCCcEEEEEEEcC-------------CCCCEEEEEEcCC
Confidence 3345442 44688888753221 1 267999999999864 5666643320 02224555553 5
Q ss_pred cEEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEc--eEEEEEECCEEeEEEecCcccccccc-eeEEcCC
Q psy9685 144 GELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNV--TLVQVKLNGTEYFRKTISSTGILDVQ-VLYLGGI 213 (979)
Q Consensus 144 G~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~--~~~~L~VD~~~~~~~~~~~~~~l~~~-~lyvGG~ 213 (979)
|.+.|.+ ++... ... .+++||+||+|-++.+. ..+.|.|||.............+... .+.||.-
T Consensus 71 g~~~l~i--~g~~~--~~~-~~~~~g~W~Hv~~twd~~~G~~~lyvdG~~~~~~~~~~g~~i~~~g~l~lGq~ 138 (206)
T 3pvn_A 71 IGYSFTV--GGSEI--LFE-VPEVTVAPVHICTSWESASGIVEFWVDGKPRVRKSLKKGYTVGAEASIILGQE 138 (206)
T ss_dssp TEEEEEE--TTEEE--EEE-CSSCCSSCEEEEEEEETTTCEEEEEETTEECCCEECCTTCCBCSSCEEEESSC
T ss_pred CeEEEEE--CCeEE--EEe-ccCCCCceEEEEEEEECCCCeEEEEECCEEcccccccCCcEECCCCEEEEccc
Confidence 7776665 43322 222 56899999999999997 47899999987643222222222223 7788753
No 131
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.88 E-value=0.00022 Score=54.12 Aligned_cols=34 Identities=26% Similarity=0.722 Sum_probs=30.6
Q ss_pred CCCCCCCCccc--cCCCCeeeecCCCCCCCCccccc
Q psy9685 230 SRSYPSGGHCT--DLWRDFSCSCVRPFLGHTCQYNF 263 (979)
Q Consensus 230 ~~pc~~~G~C~--~~~~~~~C~C~~~~~g~~C~~~~ 263 (979)
.+||.|||+|+ +..++|.|.|+.+|+|.+|+...
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence 57999999998 77889999999999999998653
No 132
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.79 E-value=0.0002 Score=74.10 Aligned_cols=45 Identities=18% Similarity=0.456 Sum_probs=36.0
Q ss_pred ccCcccccCCCCCCCCeeeccCCCCeeecCCCCCC--CCCCCCCCCC
Q psy9685 823 IDINECELSSDMCGNNGECINQPGDYKCACQFDTC--GYLCNFPDPC 867 (979)
Q Consensus 823 ~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~--G~~C~~~~~C 867 (979)
.|+|||....+.|..++.|+|+.|+|.|.|++||. |..|.+.++.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~d~P 49 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGSP 49 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEETTCE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCCCCCC
Confidence 47899987778999999999999999999999996 7778876553
No 133
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.64 E-value=0.0013 Score=53.37 Aligned_cols=35 Identities=31% Similarity=0.634 Sum_probs=29.6
Q ss_pred cCcccccCCCCCCCCeeeccCCCCeeecC-CCCCCC
Q psy9685 824 DINECELSSDMCGNNGECINQPGDYKCAC-QFDTCG 858 (979)
Q Consensus 824 ~~~~C~~~~~~C~~~g~C~~~~gs~~C~C-~~g~~G 858 (979)
|||||....+.|.++++|+|++|+|.|.| ..||.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 78999877788998899999999999974 567753
No 134
>2v73_A CBM40, putative EXO-alpha-sialidase; carbohydrate-binding module, bacterial pathogen, sialic acid, sugar-binding protein; HET: SIA; 2.2A {Clostridium perfringens}
Probab=96.59 E-value=0.06 Score=52.15 Aligned_cols=88 Identities=9% Similarity=0.058 Sum_probs=58.7
Q ss_pred ccceeEEEEEEEeccCCe--EEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCce-e-eecCeeecC
Q psy9685 290 VRNIVDISMFIRTRQLRG--AIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPES-Y-NVGGVKLAD 365 (979)
Q Consensus 290 ~~~~~~is~~frT~~~~G--lLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~-~-~~~~~~l~D 365 (979)
...+.+|.|+||+.+ ++ -||.+.... ....|++|.|.+|.+.+.+...++... + ..+.....+
T Consensus 38 ~L~~gTI~v~fks~~-~~~q~LfSIsN~k------------~~n~yf~lyi~~g~lg~e~R~~~~~~~~~~~~~a~v~~~ 104 (191)
T 2v73_A 38 SLEEGTIVTRFNMND-TSIQSLIGLSDGN------------KANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFN 104 (191)
T ss_dssp TCSSEEEEEEEEECC-CSCEEEEEEECTT------------CSSCEEEEEECSSEEEEEEEECTTSSCEEEEEEEECCCC
T ss_pred CcCCcEEEEEEecCC-CcceEEEEccCCC------------CccceEEEEEeCCEEEEEEecCCCceeeeeecccceecC
Confidence 346778999999988 54 456665431 156899999999999999877554432 1 122222244
Q ss_pred CCeeEEEEEeecc-eeeeEEEEEccCCCc
Q psy9685 366 GNNHLIQTISSTG-ILDVQVLYLGGIPET 393 (979)
Q Consensus 366 G~wH~V~~~~~~~-~l~l~vlyvGG~p~~ 393 (979)
++||+|.+..+++ . ..||+.|....
T Consensus 105 ~~wntvaf~~d~~~~---~~ly~NG~~V~ 130 (191)
T 2v73_A 105 RGINTLALKIEKGIG---AKIFLNGSLVK 130 (191)
T ss_dssp SSCEEEEEEEETTTE---EEEEETTEEEE
T ss_pred CceEEEEEEEcCCcc---EEEEECCEEEE
Confidence 5999999887752 2 34777776544
No 135
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=96.56 E-value=0.02 Score=56.37 Aligned_cols=88 Identities=7% Similarity=-0.061 Sum_probs=60.0
Q ss_pred eeEEEEEEEEeCCC-----CeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeC--cEEEEEEEeCCcceEEeecCeeec
Q psy9685 95 NIVDISMFIRTRQL-----RGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA--GELFVRLQFNSTPESYNVGGVKLA 167 (979)
Q Consensus 95 ~~~~isl~FrT~~~-----~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~--G~l~~~~~~g~~~~~~~~~~~~ln 167 (979)
..+.|+++||.... .||+|.... ....+..+.|.. +.+++.-..++....+......+.
T Consensus 64 ~Df~le~dvk~~~~~~~g~~Gi~fR~~~--------------d~~~gY~~~i~~~~~~~~l~k~~~g~~~~L~~~~~~~~ 129 (185)
T 4b1m_A 64 SDFTYESDITIKDGNGRGAGALMFRSDK--------------DAKNGYLANVDAKHDLVKFFKFENGAASVIAEYKTPID 129 (185)
T ss_dssp SSEEEEEEEEEEEEEEEEEEEEEEEECT--------------TSSSEEEEEEETTTTEEEEEEEETTEEEEEEEEECCCC
T ss_pred cCEEEEEEEEEcCCCCcceEEEEEEEcC--------------CCCCcEEEEEECCCCEEEEEEEeCCcEEEeeeccccCC
Confidence 67788888887653 366665421 134688888864 576664333433333433335788
Q ss_pred CCCcEEEEEEEEceEEEEEECCEEeEEEe
Q psy9685 168 DGNNHLIQVVRNVTLVQVKLNGTEYFRKT 196 (979)
Q Consensus 168 Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~ 196 (979)
.|+||+++|+..+..+++.||+..+....
T Consensus 130 ~g~w~~l~I~~~G~~i~~~vnG~~v~~~~ 158 (185)
T 4b1m_A 130 VNKKYHLKTEAEGDRFKIYLDDRLVIDAH 158 (185)
T ss_dssp SSCCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred CCCeEEEEEEEECCEEEEEECCEEEEEEE
Confidence 99999999999999999999998765443
No 136
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.54 E-value=0.00097 Score=50.56 Aligned_cols=33 Identities=36% Similarity=0.968 Sum_probs=27.9
Q ss_pred CCCCCCCCEEe--eCCCCcEEecCCCcccCccccc
Q psy9685 645 SNPCMNGGQCE--DRLAGFVCNCSEEYVGERCESL 677 (979)
Q Consensus 645 ~~~C~~~g~C~--~~~~~~~C~C~~G~~G~~C~~~ 677 (979)
.+||.++|+|. +..++|.|.|++||+|.+|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 56899999998 5667899999999999999853
No 137
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.42 E-value=0.0014 Score=49.90 Aligned_cols=34 Identities=29% Similarity=0.651 Sum_probs=27.8
Q ss_pred ccCcccccC--------CCCCCCCeeeccCCCCeeecCCCCCCC
Q psy9685 823 IDINECELS--------SDMCGNNGECINQPGDYKCACQFDTCG 858 (979)
Q Consensus 823 ~~~~~C~~~--------~~~C~~~g~C~~~~gs~~C~C~~g~~G 858 (979)
+|+|||... ...|.+ +|+|++|+|.|.|++||.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~--~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQH--LCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSS--EEEEETTEEEEECSTTCEE
T ss_pred CccccccCcccccccccCCCCCC--EeECCCCCeEEECCCCCeE
Confidence 478899753 257864 9999999999999999964
No 138
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.40 E-value=0.0018 Score=49.22 Aligned_cols=34 Identities=29% Similarity=0.733 Sum_probs=28.2
Q ss_pred ccCCCCCC----------CCCCCCceEecCCCCeEEecCCCCcCCC
Q psy9685 721 INIDECAS----------GPCKNSGQCIDDVNAFICNCTNTATGAS 756 (979)
Q Consensus 721 ~~~~~C~~----------~~C~~~g~C~~~~g~~~C~C~~g~~g~~ 756 (979)
.|++||.. .+|. +.|+|+.|+|+|.|++||.+..
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 37888875 5685 5999999999999999998754
No 139
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.26 E-value=0.00095 Score=64.63 Aligned_cols=42 Identities=29% Similarity=0.758 Sum_probs=31.7
Q ss_pred cccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCCCCCCCCC
Q psy9685 826 NECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCNFPDPCKD 869 (979)
Q Consensus 826 ~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~~~~C~~ 869 (979)
++|. ...|.++|+|.+..++|+|.|++||.|..|+..++|..
T Consensus 120 ~~c~--~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 120 ASCQ--DMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRDDDD 161 (162)
T ss_dssp CCCC--TTGGGGSEEEEECSSSEEEEECTTEESTTSCEECC---
T ss_pred CCCc--CCCCCCCCEEecCCCCceEeCCCCCcCcccccCcccCC
Confidence 4554 35687888999888889999999999999988777753
No 140
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=96.24 E-value=0.00023 Score=58.47 Aligned_cols=49 Identities=18% Similarity=0.271 Sum_probs=35.0
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhhhccccCCCCCCCccccCCce
Q psy9685 913 VDLALLIIGPILAILLLGGLISMAVLCLMARQKRGRRGTYSPSSQEYCNPRV 964 (979)
Q Consensus 913 ~~~~~~~~~~~~~~lll~~l~~~~~~~~~~r~~r~~~~~~~~~~~e~~~~~~ 964 (979)
.+++.++++.+++++|++++++++|+++...++|++ |+.+++|+.++.+
T Consensus 8 ~n~~~Iv~gvi~gilliGllllliwk~~~~i~DrrE---~~kFEkE~~~~~w 56 (79)
T 2knc_B 8 PDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKE---FAKFEEERARAKW 56 (79)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHhccc
Confidence 456666788888889999999999998888888774 3344454444443
No 141
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.24 E-value=0.0013 Score=49.51 Aligned_cols=35 Identities=14% Similarity=0.455 Sum_probs=29.0
Q ss_pred CCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCCCCCC
Q psy9685 831 SSDMCGNNGECINQPGDYKCACQFDTC----GYLCNFPDPC 867 (979)
Q Consensus 831 ~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~~~~C 867 (979)
.+..|.+ .|+|++|+|.|.|++||. |..|.++++|
T Consensus 4 ~ng~C~~--~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 4 DNGGCDQ--FCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp TTTSSSS--CCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCCCcCC--EeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 3456765 799999999999999994 7889888877
No 142
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.11 E-value=0.0033 Score=50.95 Aligned_cols=35 Identities=20% Similarity=0.631 Sum_probs=28.2
Q ss_pred cCCCCCC--CCCCCCceEecCCCCeEEec-CCCCcCCC
Q psy9685 722 NIDECAS--GPCKNSGQCIDDVNAFICNC-TNTATGAS 756 (979)
Q Consensus 722 ~~~~C~~--~~C~~~g~C~~~~g~~~C~C-~~g~~g~~ 756 (979)
|||||.. .+|..+++|+|+.|+|+|.| ..||.+..
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~ 39 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDL 39 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccc
Confidence 7899975 46988889999999999984 46777644
No 143
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.11 E-value=0.0025 Score=48.86 Aligned_cols=30 Identities=30% Similarity=0.731 Sum_probs=23.2
Q ss_pred CCCCC--CCCCCCceEecCCCCeEEecCCCCcCC
Q psy9685 724 DECAS--GPCKNSGQCIDDVNAFICNCTNTATGA 755 (979)
Q Consensus 724 ~~C~~--~~C~~~g~C~~~~g~~~C~C~~g~~g~ 755 (979)
|||.. +.|. +.|+|+.|+|+|.|++||...
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~ 33 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLA 33 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEEC
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEEC
Confidence 45653 3464 489999999999999998753
No 144
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.05 E-value=0.0085 Score=50.86 Aligned_cols=68 Identities=22% Similarity=0.640 Sum_probs=51.3
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCeecCCCCCC--CCCccccC-CCCCCC--CCCCCceEecCC-----CCeEEecCCC
Q psy9685 682 CADQPCYFGAVCQDTKISPYFPQGPICDCPPGYR--GSRCEINI-DECASG--PCKNSGQCIDDV-----NAFICNCTNT 751 (979)
Q Consensus 682 c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~--G~~C~~~~-~~C~~~--~C~~~g~C~~~~-----g~~~C~C~~g 751 (979)
|....|..++.|.... ++...|+|.+||. |..|..+. +.|... -|..+++|.... +...|.|.+|
T Consensus 7 C~~~~C~~NA~C~r~~-----~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g 81 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHL-----DEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKP 81 (99)
T ss_dssp CCSCCCCTTEEEECCT-----TSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECST
T ss_pred eccCCCCCCCCeEEcC-----CCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCC
Confidence 4455677788886643 6788999999998 56786443 678753 499999998774 5689999998
Q ss_pred CcC
Q psy9685 752 ATG 754 (979)
Q Consensus 752 ~~g 754 (979)
|.-
T Consensus 82 ~~~ 84 (99)
T 1ob1_C 82 DSY 84 (99)
T ss_dssp TCC
T ss_pred Ccc
Confidence 754
No 145
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=95.99 E-value=0.076 Score=53.70 Aligned_cols=89 Identities=18% Similarity=0.167 Sum_probs=52.2
Q ss_pred cceeEEEEEEEecc-CCeEEEEecCCCCCCCCCCCCCCCCccceEEEEEe-cCE--EEEEEEcCCcCceeeecCeeecCC
Q psy9685 291 RNIVDISMFIRTRQ-LRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEME-AGE--LFVRLQFNSTPESYNVGGVKLADG 366 (979)
Q Consensus 291 ~~~~~is~~frT~~-~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~-~G~--l~~~~~~g~~~~~~~~~~~~l~DG 366 (979)
...++|.+.+|+.. ..+.||..+..+ ...-+.|... ++. ..+.+..++...........+.||
T Consensus 31 l~~fTvc~wv~~~~~~~~~lfSy~~~~-------------~~n~l~l~~~~~~~g~~~~~l~i~g~~~~~~~~~~~~~~g 97 (217)
T 3flp_A 31 VRQLTVCQRIKPFHRNTGYIFSCATSN-------------QDNQFITSMYVKSDGTLNLGLQVNASSNKYISCPIEIELG 97 (217)
T ss_dssp BSEEEEEEEEEESCSSCEEEEEEEETT-------------EEEEEEEEEEECTTSEEEEEEEETTCCCEEEEEEEECCTT
T ss_pred CccEEEEEEEEecCCCCeeEEEEECCC-------------CCceEEEEEeCCCCcceEEEEEECCccceeEEcccccCCC
Confidence 45689999999543 457777554321 2234555553 333 333333333322122334578999
Q ss_pred CeeEEEEEeecceeeeEEEEEccCCCc
Q psy9685 367 NNHLIQTISSTGILDVQVLYLGGIPET 393 (979)
Q Consensus 367 ~wH~V~~~~~~~~l~l~vlyvGG~p~~ 393 (979)
+||+|.+..+...=. ..||+.|.+..
T Consensus 98 ~W~Hv~~t~d~~~G~-~~lYvdG~~~~ 123 (217)
T 3flp_A 98 QWYHVCHVWSGVDGR-MAVYANGSPCG 123 (217)
T ss_dssp SCEEEEEEEETTTTE-EEEEETTEEEE
T ss_pred CEEEEEEEEECCCCE-EEEEECCEEec
Confidence 999999998853211 34888887654
No 146
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.94 E-value=0.0018 Score=50.15 Aligned_cols=32 Identities=28% Similarity=0.688 Sum_probs=27.7
Q ss_pred CCCCCCccc--c--CCCCeeeecCCCCCCCCccccc
Q psy9685 232 SYPSGGHCT--D--LWRDFSCSCVRPFLGHTCQYNF 263 (979)
Q Consensus 232 pc~~~G~C~--~--~~~~~~C~C~~~~~g~~C~~~~ 263 (979)
||.|||+|+ + ..+.|.|.|+.+|+|.+|+...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence 899999998 3 4567999999999999998643
No 147
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.93 E-value=0.0018 Score=67.03 Aligned_cols=40 Identities=28% Similarity=0.700 Sum_probs=31.7
Q ss_pred ccCCCCC--CCCCCCCceEecCCCCeEEecCCCCcCCCCccc
Q psy9685 721 INIDECA--SGPCKNSGQCIDDVNAFICNCTNTATGASMGCL 760 (979)
Q Consensus 721 ~~~~~C~--~~~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~ 760 (979)
.|+|||. ..+|..++.|+|+.|+|.|.|++||.|++..|.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 3789997 467999999999999999999999998876553
No 148
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.78 E-value=0.01 Score=53.86 Aligned_cols=58 Identities=26% Similarity=0.654 Sum_probs=36.0
Q ss_pred CCCCCCEEeeCC--CCc-EEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCcc
Q psy9685 647 PCMNGGQCEDRL--AGF-VCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCE 720 (979)
Q Consensus 647 ~C~~~g~C~~~~--~~~-~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~ 720 (979)
||.|+|+|++.. .++ .|.|++||+|..|+.... ..|. ... ...|++.+..++.|..|+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~-----~~C~------~g~-----G~~YrG~~~~t~sG~~Cq 62 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS-----KTCY------EGN-----GHFYRGKASTDTMGRPCL 62 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS-----CCSB------CSS-----CTTCCSCCCBBTTSCBBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc-----CCCc------ccc-----cccceeeccccccCCccc
Confidence 577778887663 455 788888888888875321 1222 111 234677777777777775
No 149
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.70 E-value=0.011 Score=50.18 Aligned_cols=31 Identities=16% Similarity=0.416 Sum_probs=24.0
Q ss_pred CCCCCCCCCceEec-CCCCeEEecCCCCcCCC
Q psy9685 726 CASGPCKNSGQCID-DVNAFICNCTNTATGAS 756 (979)
Q Consensus 726 C~~~~C~~~g~C~~-~~g~~~C~C~~g~~g~~ 756 (979)
|....|..++.|.. ..|..+|+|.+||.+.+
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg 38 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEG 38 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEET
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCC
Confidence 44455778899977 57888999999988754
No 150
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.63 E-value=0.0029 Score=47.97 Aligned_cols=35 Identities=20% Similarity=0.446 Sum_probs=28.9
Q ss_pred CCCCCCCeeeccCCC-CeeecCCCCC----CCCCCCCCCCCC
Q psy9685 832 SDMCGNNGECINQPG-DYKCACQFDT----CGYLCNFPDPCK 868 (979)
Q Consensus 832 ~~~C~~~g~C~~~~g-s~~C~C~~g~----~G~~C~~~~~C~ 868 (979)
+..|.+ .|++++| +|.|.|++|| .|..|.++++|.
T Consensus 6 nggC~~--~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 6 NGGCEQ--YCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp GGGCSS--EEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CCCcCC--EeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 445765 7999998 7999999999 488899888883
No 151
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=95.63 E-value=0.0055 Score=49.27 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=26.0
Q ss_pred ccCCCCCCCCCCCCceEecCCC-CeEEecCCCCcCC
Q psy9685 721 INIDECASGPCKNSGQCIDDVN-AFICNCTNTATGA 755 (979)
Q Consensus 721 ~~~~~C~~~~C~~~g~C~~~~g-~~~C~C~~g~~g~ 755 (979)
.|+++|....-.....|+++.| +|+|.|++||...
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~ 38 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLL 38 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEEC
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeEC
Confidence 4788897443122358999999 7999999998764
No 152
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=95.50 E-value=0.0059 Score=63.79 Aligned_cols=54 Identities=28% Similarity=0.711 Sum_probs=40.3
Q ss_pred CCCCceecCCCCCCCCCCCCeecCCCCCCCCCccccCC---------CCCCC----CCCCCceEecCCCCeEEecCCCCc
Q psy9685 687 CYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCEINID---------ECASG----PCKNSGQCIDDVNAFICNCTNTAT 753 (979)
Q Consensus 687 C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~~~~~---------~C~~~----~C~~~g~C~~~~g~~~C~C~~g~~ 753 (979)
|..+|.|..+ .|.|.+||.|..|+...+ .|... .|+++|.|+.. +|.|.++|.
T Consensus 198 C~g~G~~~CG----------~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----~C~C~~~~~ 263 (280)
T 2p26_A 198 CHGKGFLECG----------ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----QCLCHTSDV 263 (280)
T ss_dssp GGGSEEEETT----------EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----EEEECCCSS
T ss_pred cCCCCeECCC----------ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----eeECcCCCC
Confidence 6666777654 799999999999974332 58532 49999999875 899987665
Q ss_pred C
Q psy9685 754 G 754 (979)
Q Consensus 754 g 754 (979)
+
T Consensus 264 ~ 264 (280)
T 2p26_A 264 P 264 (280)
T ss_dssp T
T ss_pred C
Confidence 4
No 153
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=95.45 E-value=0.0063 Score=66.54 Aligned_cols=20 Identities=15% Similarity=0.471 Sum_probs=13.4
Q ss_pred CCCCceEECCCCccCCCCCC
Q psy9685 581 PLTSYACKCPAGYSSETCAV 600 (979)
Q Consensus 581 ~~~~~~C~C~~G~~g~~C~~ 600 (979)
..+.+.|.|+++|.|..|+.
T Consensus 268 ~~~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp TTSCEEECCCTTEESTTSCE
T ss_pred CCCCeeeeCcCCCcCCCccc
Confidence 34556677777777777753
No 154
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.37 E-value=0.0059 Score=47.18 Aligned_cols=31 Identities=32% Similarity=0.881 Sum_probs=26.1
Q ss_pred CCCCCCEEe--e--CCCCcEEecCCCcccCccccc
Q psy9685 647 PCMNGGQCE--D--RLAGFVCNCSEEYVGERCESL 677 (979)
Q Consensus 647 ~C~~~g~C~--~--~~~~~~C~C~~G~~G~~C~~~ 677 (979)
+|.|+|+|. . ..+.|.|.|++||+|.+|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 799999998 3 445789999999999999854
No 155
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.33 E-value=0.011 Score=53.70 Aligned_cols=59 Identities=24% Similarity=0.618 Sum_probs=44.7
Q ss_pred CCCCCCeeccCC--Cce-eeecCCCCCCCccccccccCCCCCCCCCCEEeeCCCCcEEecCCCcccCcccc
Q psy9685 609 NCQNGARCIDGV--ARY-SCECTPGWEGALCEKEIDECLSNPCMNGGQCEDRLAGFVCNCSEEYVGERCES 676 (979)
Q Consensus 609 ~C~~~~~C~~~~--g~~-~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~ 676 (979)
||.++++|++.. ..+ .|.|++||.|..|+.+.+ .+|..+ ....|.+.+..++.|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~----~~C~~g-----~G~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS----KTCYEG-----NGHFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS----CCSBCS-----SCTTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc----CCCccc-----ccccceeeccccccCCcccC
Confidence 799999998763 445 999999999999987653 234321 23468899999999988874
No 156
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=95.28 E-value=0.21 Score=59.57 Aligned_cols=109 Identities=14% Similarity=0.184 Sum_probs=72.6
Q ss_pred eeEEEEEEEEeCCCCeE--EEEecCCCCCCCCCCCCCCCCCCCEEEEEEe-CcEEEEEEEeCCcceEEee-cCeeec---
Q psy9685 95 NIVDISMFIRTRQLRGA--IFYLGGSGDRSSPSSNGAGSEETSYIAAEME-AGELFVRLQFNSTPESYNV-GGVKLA--- 167 (979)
Q Consensus 95 ~~~~isl~FrT~~~~Gl--Lly~~~~~~~~~~~~~~~~~~~~dfi~l~L~-~G~l~~~~~~g~~~~~~~~-~~~~ln--- 167 (979)
..++|+|+||+...+.. ||-..+ ...+....||.|+|. +|.+.+.+.-..+...... .+..+.
T Consensus 35 ~~~Ti~~~~~~~~~~~~~~lfs~s~----------~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~ 104 (679)
T 2sli_A 35 TQGTIILSYKSTSENGIQSLFSVGN----------STAGNQDRHFHIYITNSGGIGIELRNTDGVFNYTLDRPASVRALY 104 (679)
T ss_dssp SSEEEEEEEEECCCCSEEEEEEEEC----------CSTTCTTEEEEEEEETTSCEEEEEEECTTTCEEEEEESSCCCSEE
T ss_pred cCeEEEEEEEcCCCCCceEEEEeec----------CCccccCcceEEEEcCCCeEEEEEecCCCCeeeeccccccccccc
Confidence 67899999999876643 444443 112223479999997 5788777665544333332 223443
Q ss_pred CC--CcEEEEEEEE--ceEEEEEECCEEeEEEecCcc----cccccceeEEcCC
Q psy9685 168 DG--NNHLIQVVRN--VTLVQVKLNGTEYFRKTISST----GILDVQVLYLGGI 213 (979)
Q Consensus 168 Dg--~WH~V~v~r~--~~~~~L~VD~~~~~~~~~~~~----~~l~~~~lyvGG~ 213 (979)
.| +||+|.+..+ ...+.|.|||..+........ .+.++..|.||++
T Consensus 105 ~~~~~~~~va~~~~~~~~~~~lyvnG~~v~~~~~~~~~f~~~~~~~~~~~iG~~ 158 (679)
T 2sli_A 105 KGERVFNTVALKADAANKQCRLFANGELLATLDKDAFKFISDITGVDNVTLGGT 158 (679)
T ss_dssp TTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSE
T ss_pred CCCceeEEEEEEEECCCCeEEEEECCEEeEeecccccccccccCCCceEEEeee
Confidence 25 6999999999 579999999998876654322 2334568999995
No 157
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.22 E-value=0.0054 Score=59.22 Aligned_cols=41 Identities=32% Similarity=0.861 Sum_probs=33.8
Q ss_pred CCCCCCCCCCCCeeecCCCCCCCeEeecCCCCCCCCCCcCCCcC
Q psy9685 865 DPCKDEPCQNGGTCHEDCRHQADYKCDCLPGWTGKNCTEVPEYL 908 (979)
Q Consensus 865 ~~C~~~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~~~~~~ 908 (979)
++|...+|.++|+|. +..++|+|.|.+||+|..|+..+++.
T Consensus 120 ~~c~~~~C~~~g~C~---~~~~~~~c~C~~g~~G~~Ce~~~~c~ 160 (162)
T 1g1s_A 120 ASCQDMSCSKQGECL---ETIGNYTCSCYPGFYGPECEYVRDDD 160 (162)
T ss_dssp CCCCTTGGGGSEEEE---ECSSSEEEEECTTEESTTSCEECC--
T ss_pred CCCcCCCCCCCCEEe---cCCCCceEeCCCCCcCcccccCcccC
Confidence 457777899999999 45788999999999999999887653
No 158
>3kqr_A Serum amyloid P-component; glycoprotein, disulfide bond, lectin, metal-binding secreted; HET: NAG; 1.50A {Homo sapiens} SCOP: b.29.1.5 PDB: 1lgn_A* 1gyk_A 2a3w_A* 2a3x_A* 2a3y_A* 1sac_A* 3d5o_A* 2w08_A*
Probab=95.18 E-value=0.23 Score=49.49 Aligned_cols=84 Identities=10% Similarity=0.024 Sum_probs=52.8
Q ss_pred cceeEEEEEEEecc-CCeEEEEecCCCCCCCCCCCCCCCCccceEEEEE-ecCEEEEEEEcCCcCceeeecCeeecCCCe
Q psy9685 291 RNIVDISMFIRTRQ-LRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEM-EAGELFVRLQFNSTPESYNVGGVKLADGNN 368 (979)
Q Consensus 291 ~~~~~is~~frT~~-~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l-~~G~l~~~~~~g~~~~~~~~~~~~l~DG~w 368 (979)
...++|.|.+||.. ..+.||..+..+ ...-+.|.. .+|.+.+.+ ++... .. ...+.||+|
T Consensus 30 l~~fTvc~wv~~~~~~~~tlfSy~~~~-------------~~nel~l~~~~~~~~~l~i--~g~~~--~~-~~~~~~g~W 91 (204)
T 3kqr_A 30 LQNFTLCFRAYSDLSRAYSLFSYNTQG-------------RDNELLVYKERVGEYSLYI--GRHKV--TS-KVIEKFPAP 91 (204)
T ss_dssp BSEEEEEEEEECCCCSCEEEEEEEETT-------------EEEEEEEEEEETTEEEEEE--TTEEE--EE-ECCCCSSCC
T ss_pred cCCEEEEEEEEeCCCCCeEEEEEECCC-------------CCceEEEEEcCCCeEEEEE--CCeEE--EE-ecccCCCce
Confidence 45789999999875 467777654431 112333333 567777765 33222 11 257899999
Q ss_pred eEEEEEeecceeeeEEEEEccCCCc
Q psy9685 369 HLIQTISSTGILDVQVLYLGGIPET 393 (979)
Q Consensus 369 H~V~~~~~~~~l~l~vlyvGG~p~~ 393 (979)
|+|.+..+...- ...||+.|.+..
T Consensus 92 ~Hv~~twd~~~G-~~~lyvdG~~~~ 115 (204)
T 3kqr_A 92 VHICVSWESSSG-IAEFWINGTPLV 115 (204)
T ss_dssp EEEEEEEETTTC-EEEEEETTEECC
T ss_pred EEEEEEEECCCC-eEEEEECCEEee
Confidence 999999875421 134899997654
No 159
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=95.16 E-value=0.12 Score=56.53 Aligned_cols=109 Identities=11% Similarity=0.049 Sum_probs=67.7
Q ss_pred eeEEEEeCccccccceeeEEEEEEEEeCCC--CeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEE--------eCcEEEE
Q psy9685 79 SLVTVAVGGVARRAVRNIVDISMFIRTRQL--RGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEM--------EAGELFV 148 (979)
Q Consensus 79 s~~~~~~~~~~~~~~~~~~~isl~FrT~~~--~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L--------~~G~l~~ 148 (979)
.|+.++.... .-.+.++|+..||...- .--|| + ..+.+.|.+ ..++|++
T Consensus 148 ~~~~~~~~~~---~~~~~~T~eawv~~~~~~~~~ti~--g----------------~e~~~~lr~gd~~~g~~~~~~Lq~ 206 (355)
T 4dqa_A 148 HYISVKFPVG---TFFSSFTYEALINVDYFLDNNTIM--G----------------TEGVMILRIGDAGGGITPKDYLEV 206 (355)
T ss_dssp CCEEECCCTT---CCBSSEEEEEEEEESCCCSSEEEE--E----------------ETTTEEEEEEEGGGTSEEEEEEEE
T ss_pred CEEEcccCCC---CCCCcEEEEEEEECCcCCCcceEE--e----------------CCCeEEEEEecCCCCCCcCCeEEE
Confidence 5666654221 23368899999998653 33444 2 113555666 3345555
Q ss_pred EEEeCCcceEEeecCeeecCCCcEEEEEEEE--ceEEEEEECCEEeEEEec-Cccccccc-ceeEEcCCC
Q psy9685 149 RLQFNSTPESYNVGGVKLADGNNHLIQVVRN--VTLVQVKLNGTEYFRKTI-SSTGILDV-QVLYLGGIP 214 (979)
Q Consensus 149 ~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~--~~~~~L~VD~~~~~~~~~-~~~~~l~~-~~lyvGG~p 214 (979)
..+ + . ..+...+.+|+||+|.+.++ +..++|+|||........ .....+.. .+++||...
T Consensus 207 --~~~-~-~--~~s~~~l~~g~W~HvA~t~d~~~~~~~lYvNG~~~~~~~~~~~~~~~~~~~~l~IG~~~ 270 (355)
T 4dqa_A 207 --AGG-Q-N--YRVTKPLLTNRWYHVALTYDQPTGKTGIYVNGEKWAGSDWGIDGFDPNSDMGFYIGRIY 270 (355)
T ss_dssp --EES-S-C--EECSSCCCSSCEEEEEEEEETTTTEEEEEETTEEEEEEECCCCCBCTTSTTCEEESCCT
T ss_pred --ecC-C-c--cccCCcccCCCEEEEEEEEECCCCEEEEEECCEEEEEEecCCCccccCCCceEEECCCC
Confidence 333 2 2 22446899999999999999 789999999987765543 11111222 379999854
No 160
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.09 E-value=0.033 Score=47.55 Aligned_cols=69 Identities=16% Similarity=0.345 Sum_probs=50.8
Q ss_pred CCCCCCCCCCceEec-CCCCeEEecCCCCcCCCCccccccccCCCCCCccccccCCCcCCCCCCCCcCCCCCCCCCCCCC
Q psy9685 725 ECASGPCKNSGQCID-DVNAFICNCTNTATGASMGCLGEVRLGDLLLPYFTWEQLGYTDTLSCPECFSLDSGPGGPGLAD 803 (979)
Q Consensus 725 ~C~~~~C~~~g~C~~-~~g~~~C~C~~g~~g~~~~c~~~~~~~~~~~~~~~~~~~g~~~~~~C~~C~~~~~~~~~~~~~~ 803 (979)
.|....|..++.|.. .+|..+|+|..||.+.+.
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~---------------------------------------------- 45 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGG---------------------------------------------- 45 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECSS----------------------------------------------
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccCC----------------------------------------------
Confidence 455556888899987 788889999999887543
Q ss_pred CCCCccccCCCCcCCCCccccCcc-cccCCCCCCCCeeeccCC-CCeeecCCCCC
Q psy9685 804 SGPGVQTTPILGYTGEMCEIDINE-CELSSDMCGNNGECINQP-GDYKCACQFDT 856 (979)
Q Consensus 804 ~~~~~~C~C~~g~~G~~C~~~~~~-C~~~~~~C~~~g~C~~~~-gs~~C~C~~g~ 856 (979)
.|..+ +. |...+..|..++.|.... ..-.|.|..+|
T Consensus 46 ----------------~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~ 83 (105)
T 1n1i_A 46 ----------------KCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEG 83 (105)
T ss_dssp ----------------SEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred ----------------EEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCC
Confidence 34333 55 665667788889998764 67789998875
No 161
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=95.03 E-value=0.015 Score=63.48 Aligned_cols=18 Identities=33% Similarity=0.870 Sum_probs=13.5
Q ss_pred CCcEEecCCCcccCcccc
Q psy9685 659 AGFVCNCSEEYVGERCES 676 (979)
Q Consensus 659 ~~~~C~C~~G~~G~~C~~ 676 (979)
+.+.|.|..+|.|..|+.
T Consensus 270 ~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 270 DKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp SCEEECCCTTEESTTSCE
T ss_pred CCeeeeCcCCCcCCCccc
Confidence 345688888888888874
No 162
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=94.70 E-value=0.44 Score=56.77 Aligned_cols=109 Identities=19% Similarity=0.272 Sum_probs=72.2
Q ss_pred eeEEEEEEEEeCCCCe--EEEEecCCCCCCCCCCCCCCCCCCCEEEEEEe-CcEEEEEEEeCCcceEEee-cCeeec---
Q psy9685 95 NIVDISMFIRTRQLRG--AIFYLGGSGDRSSPSSNGAGSEETSYIAAEME-AGELFVRLQFNSTPESYNV-GGVKLA--- 167 (979)
Q Consensus 95 ~~~~isl~FrT~~~~G--lLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~-~G~l~~~~~~g~~~~~~~~-~~~~ln--- 167 (979)
..++|+|+||+...+. -||-..+ ....+...|+.|+|. +|.+.+.+.-..+...... .+..+.
T Consensus 57 ~~~T~~~~~~~~~~~~~~~lfs~sn----------~~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~ 126 (686)
T 2jkb_A 57 ESQTVVMKFKADKPNSLQALFGLSN----------SKAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFSRPASLWGKH 126 (686)
T ss_dssp SCEEEEEEEECSSCCSEEEEEEEEC----------CSTTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEEESSCCCCEE
T ss_pred CceEEEEEEEccCCCCeeEEEEeec----------CcccccCcceEEEEcCCCeEEEEEecCCCCeeeeccccccccccc
Confidence 6689999999876543 3444332 122223579999996 8888887765544222222 223444
Q ss_pred CC--CcEEEEEEEE--ceEEEEEECCEEeEEEecCcc----cccccceeEEcCC
Q psy9685 168 DG--NNHLIQVVRN--VTLVQVKLNGTEYFRKTISST----GILDVQVLYLGGI 213 (979)
Q Consensus 168 Dg--~WH~V~v~r~--~~~~~L~VD~~~~~~~~~~~~----~~l~~~~lyvGG~ 213 (979)
.| +||+|.|..+ .+.+.|.|||..+........ .+.++..|-||++
T Consensus 127 ~~~~~~~~va~~~d~~~~~~~lyvnG~~v~~~~~~~~~~~~~~~~~~~~~iG~~ 180 (686)
T 2jkb_A 127 KGQAVENTLVFVSDSKDKTYTMYVNGIEVFSETVDTFLPISNINGIDKATLGAV 180 (686)
T ss_dssp TTEECCEEEEEEEETTTTEEEEEETTEEEEEEECSSCCCGGGSTTCCEEEESSE
T ss_pred cCCcceeEEEEEEECCCCeEEEEECCEEEEeecccccceeccCCCcceeeeccc
Confidence 45 7999999999 579999999998877654332 2234568899985
No 163
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.70 E-value=0.013 Score=67.71 Aligned_cols=37 Identities=30% Similarity=0.880 Sum_probs=33.3
Q ss_pred cccCCCCCCCCCCEEee-CCCCcEEecC-CCcccCcccc
Q psy9685 640 IDECLSNPCMNGGQCED-RLAGFVCNCS-EEYVGERCES 676 (979)
Q Consensus 640 ~~~C~~~~C~~~g~C~~-~~~~~~C~C~-~G~~G~~C~~ 676 (979)
+++|.++||.++|+|.+ ..++|.|.|. .||+|..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 46788999999999999 8889999999 9999999985
No 164
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.36 E-value=0.06 Score=45.97 Aligned_cols=67 Identities=24% Similarity=0.545 Sum_probs=50.7
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCeecCCCCCC--CCCccccCCC-CCC--CCCCCCceEecCC-CCeEEecCCCCcC
Q psy9685 682 CADQPCYFGAVCQDTKISPYFPQGPICDCPPGYR--GSRCEINIDE-CAS--GPCKNSGQCIDDV-NAFICNCTNTATG 754 (979)
Q Consensus 682 c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~--G~~C~~~~~~-C~~--~~C~~~g~C~~~~-g~~~C~C~~g~~g 754 (979)
|....|..++.|.... ++...|+|..||. |..|..+ +. |.. +-|..+++|.... +.-.|.|.++|.-
T Consensus 13 C~~t~Cp~NA~C~r~~-----~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~ 85 (105)
T 1n1i_A 13 CIDTNVPENAACYRYL-----DGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSE 85 (105)
T ss_dssp CCSSCCCTTEEEEECT-----TSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCC
T ss_pred ecCCCCCCCCCeEECC-----CCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCc
Confidence 4455677778887643 6778999999998 6688755 55 753 3499999999875 7889999988643
No 165
>3pvn_A C-reactive protein; pentraxin family, immune system; 1.98A {Homo sapiens} SCOP: b.29.1.5 PDB: 1gnh_A 1lj7_A 3l2y_A 1b09_A 3pvo_A
Probab=94.28 E-value=0.35 Score=48.30 Aligned_cols=84 Identities=11% Similarity=-0.027 Sum_probs=53.4
Q ss_pred cceeEEEEEEEecc---CCeEEEEecCCCCCCCCCCCCCCCCccceEEEEE-ecCEEEEEEEcCCcCceeeecCeeecCC
Q psy9685 291 RNIVDISMFIRTRQ---LRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEM-EAGELFVRLQFNSTPESYNVGGVKLADG 366 (979)
Q Consensus 291 ~~~~~is~~frT~~---~~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l-~~G~l~~~~~~g~~~~~~~~~~~~l~DG 366 (979)
...++|.|.+||.. .++.||..+..+ ...-+.|.. .+|.+.+.+ ++... .. ...+.||
T Consensus 30 l~~fTvc~wv~~~~~~~~~~~lfSy~~~~-------------~~n~l~l~~~~~g~~~l~i--~g~~~-~~--~~~~~~g 91 (206)
T 3pvn_A 30 LKAFTVCLHFYTELSSTRGYSIFSYATKR-------------QDNEILIFWSKDIGYSFTV--GGSEI-LF--EVPEVTV 91 (206)
T ss_dssp BSEEEEEEEEEESGGGTCCEEEEEEEETT-------------EEEEEEEEEETTTEEEEEE--TTEEE-EE--ECSSCCS
T ss_pred cCCEEEEEEEEecCCCCCcEEEEEEEcCC-------------CCCEEEEEEcCCCeEEEEE--CCeEE-EE--eccCCCC
Confidence 45789999999975 478887665431 222334444 467777765 33222 11 2467999
Q ss_pred CeeEEEEEeecceeeeEEEEEccCCCc
Q psy9685 367 NNHLIQTISSTGILDVQVLYLGGIPET 393 (979)
Q Consensus 367 ~wH~V~~~~~~~~l~l~vlyvGG~p~~ 393 (979)
+||+|.+..+...=. ..||+.|.+..
T Consensus 92 ~W~Hv~~twd~~~G~-~~lyvdG~~~~ 117 (206)
T 3pvn_A 92 APVHICTSWESASGI-VEFWVDGKPRV 117 (206)
T ss_dssp SCEEEEEEEETTTCE-EEEEETTEECC
T ss_pred ceEEEEEEEECCCCe-EEEEECCEEcc
Confidence 999999998864211 34899987654
No 166
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=94.26 E-value=0.049 Score=38.78 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=30.0
Q ss_pred ccccchhhhhhhHHHHHHHHHHHHHHHHHhhhhhccc
Q psy9685 912 VVDLALLIIGPILAILLLGGLISMAVLCLMARQKRGR 948 (979)
Q Consensus 912 ~~~~~~~~~~~~~~~lll~~l~~~~~~~~~~r~~r~~ 948 (979)
..+...++++.++++++++++++++|+++...++||+
T Consensus 6 ~~n~~~Iv~gvi~~ivliGl~lLliwk~~~~i~DrrE 42 (43)
T 2k9j_B 6 GPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKE 42 (43)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEeehHHHHHHHHHHHHHHHHHHHHHHHheehhhc
Confidence 3456666778888888899999999999998888873
No 167
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=94.20 E-value=0.016 Score=60.45 Aligned_cols=59 Identities=32% Similarity=0.651 Sum_probs=43.0
Q ss_pred CCCCCEEeeCCCCcEEecCCCcccCcccccccc--------ccCCC----CCCCCceecCCCCCCCCCCCCeecCCCCC-
Q psy9685 648 CMNGGQCEDRLAGFVCNCSEEYVGERCESLRQI--------SCADQ----PCYFGAVCQDTKISPYFPQGPICDCPPGY- 714 (979)
Q Consensus 648 C~~~g~C~~~~~~~~C~C~~G~~G~~C~~~~~~--------~c~~~----~C~~~~~C~~~~~~~~~~~~~~C~C~~G~- 714 (979)
|..+|.|... .|.|.+||.|+.|+..... .|... .|.++|.|..+ +|.|.+++
T Consensus 198 C~g~G~~~CG----~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG----------~C~C~~~~~ 263 (280)
T 2p26_A 198 CHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCG----------QCLCHTSDV 263 (280)
T ss_dssp GGGSEEEETT----EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETT----------EEEECCCSS
T ss_pred cCCCCeECCC----ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCC----------eeECcCCCC
Confidence 7777888765 8999999999999864321 56422 48888888765 79998775
Q ss_pred -----CCCCcc
Q psy9685 715 -----RGSRCE 720 (979)
Q Consensus 715 -----~G~~C~ 720 (979)
.|..|+
T Consensus 264 ~~~~~~G~~~~ 274 (280)
T 2p26_A 264 PGKLIYGQYCE 274 (280)
T ss_dssp TTCEEESTTSC
T ss_pred CCeeEeeEecc
Confidence 356664
No 168
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.13 E-value=0.0089 Score=58.18 Aligned_cols=47 Identities=26% Similarity=0.697 Sum_probs=37.3
Q ss_pred CCcCCCCccccCcccccCCCC---CCCCeeeccCCCCeeecCCCCCC----CCCCC
Q psy9685 814 LGYTGEMCEIDINECELSSDM---CGNNGECINQPGDYKCACQFDTC----GYLCN 862 (979)
Q Consensus 814 ~g~~G~~C~~~~~~C~~~~~~---C~~~g~C~~~~gs~~C~C~~g~~----G~~C~ 862 (979)
.||.+..+.++++||...... |.+ .|.+..|+|.|.|++||. |..|.
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEECCCCCccc
Confidence 378888877789999765443 876 799999999999999996 45554
No 169
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.00 E-value=0.021 Score=66.01 Aligned_cols=36 Identities=25% Similarity=0.840 Sum_probs=33.7
Q ss_pred CCCCCCCCCCCCceEec-CCCCeEEecC-CCCcCCCCc
Q psy9685 723 IDECASGPCKNSGQCID-DVNAFICNCT-NTATGASMG 758 (979)
Q Consensus 723 ~~~C~~~~C~~~g~C~~-~~g~~~C~C~-~g~~g~~~~ 758 (979)
+|+|.++||.++|+|.+ ..++|+|.|. +||+|..|.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCC
Confidence 57899999999999999 8999999999 999999986
No 170
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=93.85 E-value=0.023 Score=54.78 Aligned_cols=38 Identities=26% Similarity=0.656 Sum_probs=28.4
Q ss_pred CCCCCCCeeeccCCCCeeecCCCCCCCCCCCCCCCCCC
Q psy9685 832 SDMCGNNGECINQPGDYKCACQFDTCGYLCNFPDPCKD 869 (979)
Q Consensus 832 ~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~~~~C~~ 869 (979)
...|.++|+|.+..++|.|.|.+||.|..|+...+|.+
T Consensus 124 ~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~~~c~~ 161 (164)
T 3cfw_A 124 PWSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQVDPR 161 (164)
T ss_dssp TTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC-----
T ss_pred CCcCCCCCeecccCCCceeeeCCCcccccccccccCcc
Confidence 36788888999888889999999999999988777753
No 171
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=93.68 E-value=0.1 Score=37.04 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=14.1
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhhhccc
Q psy9685 917 LLIIGPILAILLLGGLISMAVLCLMARQKRGR 948 (979)
Q Consensus 917 ~~~~~~~~~~lll~~l~~~~~~~~~~r~~r~~ 948 (979)
.++.+.++++++++++ +++++++++||++++
T Consensus 11 aIA~gVVgGv~~v~ii-~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 11 LIAAGVIGGLFILVIV-GLTFAVYVRRKSIKK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHTTCSSC
T ss_pred eEEEeehHHHHHHHHH-HHHHHHHhhhhhhhh
Confidence 3344444444444433 344445545544443
No 172
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.67 E-value=0.03 Score=64.83 Aligned_cols=37 Identities=35% Similarity=1.012 Sum_probs=32.0
Q ss_pred cccCCCCCCCCCCEEee-CCCCcEEecC-CCcccCcccc
Q psy9685 640 IDECLSNPCMNGGQCED-RLAGFVCNCS-EEYVGERCES 676 (979)
Q Consensus 640 ~~~C~~~~C~~~g~C~~-~~~~~~C~C~-~G~~G~~C~~ 676 (979)
+++|.++||.|+|+|.+ ..++|.|.|+ +||+|..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 36788999999999995 4578999999 9999999985
No 173
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=93.67 E-value=0.1 Score=37.02 Aligned_cols=29 Identities=21% Similarity=0.362 Sum_probs=14.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhccc
Q psy9685 919 IIGPILAILLLGGLISMAVLCLMARQKRGR 948 (979)
Q Consensus 919 ~~~~~~~~lll~~l~~~~~~~~~~r~~r~~ 948 (979)
+++.+++ +++++++++++.++.+||+.++
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~~~~ 42 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQQKI 42 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHCSCC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhhhhc
Confidence 3344444 3344444555555555555443
No 174
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=93.60 E-value=0.098 Score=57.41 Aligned_cols=14 Identities=29% Similarity=0.966 Sum_probs=11.3
Q ss_pred EEecCCCcccCccc
Q psy9685 662 VCNCSEEYVGERCE 675 (979)
Q Consensus 662 ~C~C~~G~~G~~C~ 675 (979)
.|.|..++.|..|+
T Consensus 287 ~C~C~hnT~G~~CE 300 (403)
T 2y38_A 287 QCACQHNTCGGSCD 300 (403)
T ss_dssp EECCCTTEESSSCC
T ss_pred EeECcCcCcCCCCC
Confidence 58888888888887
No 175
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.51 E-value=0.033 Score=64.45 Aligned_cols=36 Identities=31% Similarity=0.889 Sum_probs=32.5
Q ss_pred CCCCCCCCCCCCceEec-CCCCeEEecC-CCCcCCCCc
Q psy9685 723 IDECASGPCKNSGQCID-DVNAFICNCT-NTATGASMG 758 (979)
Q Consensus 723 ~~~C~~~~C~~~g~C~~-~~g~~~C~C~-~g~~g~~~~ 758 (979)
+++|.++||.++|+|++ ..++|.|.|+ +||+|..|.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 47899999999999995 5689999999 999999987
No 176
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=93.45 E-value=0.024 Score=42.44 Aligned_cols=21 Identities=14% Similarity=0.414 Sum_probs=17.7
Q ss_pred ceEecCCCCeEEecCCCCcCC
Q psy9685 735 GQCIDDVNAFICNCTNTATGA 755 (979)
Q Consensus 735 g~C~~~~g~~~C~C~~g~~g~ 755 (979)
+.|+|+.|+|+|.|++||...
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~ 30 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLG 30 (51)
T ss_dssp SCCCEETTEECCCCCTTEEEC
T ss_pred CEeEcCCCCeEEeCCCCcEEC
Confidence 469999999999999988753
No 177
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=93.38 E-value=1.8 Score=46.98 Aligned_cols=113 Identities=14% Similarity=0.082 Sum_probs=68.4
Q ss_pred CCCeeEEEEeCccccc-cceeeEEEEEEEEeCCC---------Ce--EEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeC
Q psy9685 76 TTNSLVTVAVGGVARR-AVRNIVDISMFIRTRQL---------RG--AIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA 143 (979)
Q Consensus 76 ~~~s~~~~~~~~~~~~-~~~~~~~isl~FrT~~~---------~G--lLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~ 143 (979)
+.+|.+.+...+..-. .+...|+|+|.||+... +| -|+=.-. . + ..+ ..--..+.|.+
T Consensus 65 ~~~s~~~V~~~n~ii~N~~t~dFSISFWvK~~k~~~~~i~~~~~~e~TIin~k~-~-------n-~~s-~nsGW~I~l~g 134 (452)
T 1a8d_A 65 NESSEVIVHKAMDIEYNDMFNNFTVSFWLRVPKVSASHLEQYGTNEYSIISSMK-K-------H-SLS-IGSGWSVSLKG 134 (452)
T ss_dssp STTCCEEEECCGGGTTTTTTSCEEEEEEEECCCCCHHHHHHHTTCEEEEEECCE-E-------C-GGG-CEEEEEEEEET
T ss_pred CCCcceEEecCchHhhccCCCceEEEEEEECCCcCcccccccccCcceEEeeec-c-------c-ccc-CCCCeEEEeCC
Confidence 4455666665333222 34568999999999774 33 2332110 0 0 000 01135567788
Q ss_pred cEEEEEEEeCCcceE---EeecCeeec---CCCcEEEEEEEEc-eEEEEEECCEEeEEEecC
Q psy9685 144 GELFVRLQFNSTPES---YNVGGVKLA---DGNNHLIQVVRNV-TLVQVKLNGTEYFRKTIS 198 (979)
Q Consensus 144 G~l~~~~~~g~~~~~---~~~~~~~ln---Dg~WH~V~v~r~~-~~~~L~VD~~~~~~~~~~ 198 (979)
+.+.+.+..-.+... +...+..++ ||+||.|+|+-++ ....+.|||.........
T Consensus 135 n~liw~l~Dsng~~~~i~f~~~~~~Isd~~~nkW~fVtItvDR~g~~~IYING~Lv~s~~It 196 (452)
T 1a8d_A 135 NNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSANLYINGVLMGSAEIT 196 (452)
T ss_dssp TEEEEEEECTTSCEEEEEEECCSBTTSCSSSSSCEEEEEEECTTSEEEEEETTEEEEEEECT
T ss_pred CeEEEEEEcCCCceeeEEeccccccCccccCCeEEEEEEEECCCCCEEEEECCEEeeccchh
Confidence 889998887554322 111234455 6999999999994 566999999987777553
No 178
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=93.24 E-value=0.053 Score=52.05 Aligned_cols=28 Identities=36% Similarity=1.012 Sum_probs=22.4
Q ss_pred CCCCCCeeecCCCCCCCeEeecCCCCCCCCCCcC
Q psy9685 871 PCQNGGTCHEDCRHQADYKCDCLPGWTGKNCTEV 904 (979)
Q Consensus 871 ~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~~ 904 (979)
+|.|+|.|. ...+|.|++||+|..|+..
T Consensus 154 ~C~ngG~Cv------~P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 154 GCRNGGFCN------ERRICECPDGFHGPHCEGT 181 (188)
T ss_dssp CCCTTCEEC------TTSCEECCTTCBTTTTCBC
T ss_pred CCCCCCEeC------CCCcccCcCCCCCCCCcCC
Confidence 577888887 3568999999999998864
No 179
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.23 E-value=0.11 Score=36.93 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=14.0
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHhhhhhcc
Q psy9685 916 ALLIIGPILAILLLGGLISMAVLCLMARQKRG 947 (979)
Q Consensus 916 ~~~~~~~~~~~lll~~l~~~~~~~~~~r~~r~ 947 (979)
..++++.+++++++++++ ++++++++||+++
T Consensus 11 ~~IA~gVVgGv~~~~ii~-~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVA-LGIGLFMRRRHIV 41 (44)
T ss_dssp SSSTHHHHHHHHHHHHHH-HHHHHHHHTTTCC
T ss_pred ceEEeehhHHHHHHHHHH-HHHHHHhhhhHhh
Confidence 333444444455444443 4444444444433
No 180
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=93.03 E-value=0.031 Score=43.27 Aligned_cols=32 Identities=19% Similarity=0.376 Sum_probs=25.2
Q ss_pred CCCCCCCeeeccCC-CCeeecCCCCC----CCCCCCCCC
Q psy9685 832 SDMCGNNGECINQP-GDYKCACQFDT----CGYLCNFPD 865 (979)
Q Consensus 832 ~~~C~~~g~C~~~~-gs~~C~C~~g~----~G~~C~~~~ 865 (979)
+..|.+ .|++.+ |+|.|.|++|| .|..|.+++
T Consensus 6 nggC~~--~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 6 NGRCEQ--FCKNSADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp GGGCSS--EEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred CCCcCC--EeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 455765 799999 69999999999 477887643
No 181
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.02 E-value=0.068 Score=39.51 Aligned_cols=33 Identities=27% Similarity=0.673 Sum_probs=21.4
Q ss_pred CCCCCCCeeecCCCCCCCeEeecCCCCCCCCCCcC
Q psy9685 870 EPCQNGGTCHEDCRHQADYKCDCLPGWTGKNCTEV 904 (979)
Q Consensus 870 ~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~~ 904 (979)
+.|.|+ +|... .....+.|.|.+||+|.+|+..
T Consensus 14 ~yC~nG-~C~~~-~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFHG-TCRFL-VQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccCC-EEeec-cCCCCeEEECCCCCcccCCCce
Confidence 346664 77632 1235678888888888888754
No 182
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=92.52 E-value=0.04 Score=44.82 Aligned_cols=33 Identities=27% Similarity=0.753 Sum_probs=21.4
Q ss_pred CCCCCCCCeeecCCCCCCCeEeecCCCCCCCCCCc
Q psy9685 869 DEPCQNGGTCHEDCRHQADYKCDCLPGWTGKNCTE 903 (979)
Q Consensus 869 ~~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~ 903 (979)
.+.|.|+ +|... .....+.|.|.+||+|.+|+.
T Consensus 45 ~~yClnG-~C~~i-~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIHG-ECKYV-KELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSSE-EECCB-GGGTBCCEEECTTEESTTCCE
T ss_pred cCcCCCC-Eeeee-cCCCCeEEEcCCCcccccccc
Confidence 3467764 77422 123456788888888888864
No 183
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=92.51 E-value=0.057 Score=40.74 Aligned_cols=21 Identities=19% Similarity=0.376 Sum_probs=17.9
Q ss_pred ceEecCCC-CeEEecCCCCcCC
Q psy9685 735 GQCIDDVN-AFICNCTNTATGA 755 (979)
Q Consensus 735 g~C~~~~g-~~~C~C~~g~~g~ 755 (979)
+.|+++.+ +|+|.|++||...
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~ 32 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLL 32 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEEC
T ss_pred CEeEcCCCCCEEeeCCCCCEEC
Confidence 47999998 7999999998754
No 184
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.42 E-value=0.09 Score=49.14 Aligned_cols=58 Identities=22% Similarity=0.600 Sum_probs=38.1
Q ss_pred CCCCCCeeccC--CCce-eeecCCCCCCCccccccccCCCCCCCCCCEEeeCC-CCcEEecCCCcccCcccc
Q psy9685 609 NCQNGARCIDG--VARY-SCECTPGWEGALCEKEIDECLSNPCMNGGQCEDRL-AGFVCNCSEEYVGERCES 676 (979)
Q Consensus 609 ~C~~~~~C~~~--~g~~-~C~C~~G~~G~~C~~~~~~C~~~~C~~~g~C~~~~-~~~~C~C~~G~~G~~C~~ 676 (979)
||.|++.|+.. ...+ .|.|++||.|..|+.+.++ .|.... ..|.........|..|..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~----------~C~~g~G~~YrG~~s~T~sG~~Cq~ 75 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK----------TCYEGNGHFYRGKASTDTMGRPCLP 75 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC----------CEECTTCTTCCSCCCBBTTSCBCCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc----------cCCCCCccccccceecCCcCCcccC
Confidence 79999999765 3444 7999999999999765431 233322 245555555556666653
No 185
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.10 E-value=0.073 Score=39.50 Aligned_cols=30 Identities=23% Similarity=0.510 Sum_probs=20.9
Q ss_pred CCCCCCeeec--cCCCCeeecCCCCCCCCCCCC
Q psy9685 833 DMCGNNGECI--NQPGDYKCACQFDTCGYLCNF 863 (979)
Q Consensus 833 ~~C~~~g~C~--~~~gs~~C~C~~g~~G~~C~~ 863 (979)
..|.| |+|. ...+.+.|.|++||+|.+|+.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 45666 6774 445567788888888888763
No 186
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=92.05 E-value=0.044 Score=53.15 Aligned_cols=42 Identities=26% Similarity=0.706 Sum_probs=34.4
Q ss_pred CCCCCCCccccCCCCCCCC-----CCCCceEecCCCCeEEecCCCCcCC
Q psy9685 712 PGYRGSRCEINIDECASGP-----CKNSGQCIDDVNAFICNCTNTATGA 755 (979)
Q Consensus 712 ~G~~G~~C~~~~~~C~~~~-----C~~~g~C~~~~g~~~C~C~~g~~g~ 755 (979)
.||.+..+..++++|...+ |.+ .|.+..|+|.|.|++||.+.
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence 6787777667889998654 754 79999999999999999854
No 187
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.62 E-value=0.1 Score=38.58 Aligned_cols=31 Identities=19% Similarity=0.454 Sum_probs=25.9
Q ss_pred CCCCCCCCcccc--CCCCeeeecCCCCCCCCccc
Q psy9685 230 SRSYPSGGHCTD--LWRDFSCSCVRPFLGHTCQY 261 (979)
Q Consensus 230 ~~pc~~~G~C~~--~~~~~~C~C~~~~~g~~C~~ 261 (979)
.+.|.|| +|.- ..+.+.|.|+.+|+|++|+.
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 4578886 9984 45789999999999999985
No 188
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=91.33 E-value=0.23 Score=54.54 Aligned_cols=14 Identities=29% Similarity=0.740 Sum_probs=10.5
Q ss_pred EEecCCCCcCCCCc
Q psy9685 745 ICNCTNTATGASMG 758 (979)
Q Consensus 745 ~C~C~~g~~g~~~~ 758 (979)
+|.|..++.|..|.
T Consensus 287 ~C~C~hnT~G~~CE 300 (403)
T 2y38_A 287 QCACQHNTCGGSCD 300 (403)
T ss_dssp EECCCTTEESSSCC
T ss_pred EeECcCcCcCCCCC
Confidence 57888888887764
No 189
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=91.27 E-value=0.27 Score=45.92 Aligned_cols=58 Identities=24% Similarity=0.602 Sum_probs=38.8
Q ss_pred CCCCCCEEeeC--CCCc-EEecCCCcccCccccccccccCCCCCCCCceecCCCCCCCCCCCCeecCCCCCCCCCcc
Q psy9685 647 PCMNGGQCEDR--LAGF-VCNCSEEYVGERCESLRQISCADQPCYFGAVCQDTKISPYFPQGPICDCPPGYRGSRCE 720 (979)
Q Consensus 647 ~C~~~g~C~~~--~~~~-~C~C~~G~~G~~C~~~~~~~c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~G~~C~ 720 (979)
||.|+|+|+.. ...+ .|.|++||.|+.|+..... .|.... ...|+........|..|.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~-----------~C~~g~-----G~~YrG~~s~T~sG~~Cq 74 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK-----------TCYEGN-----GHFYRGKASTDTMGRPCL 74 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSC-----------CEECTT-----CTTCCSCCCBBTTSCBCC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccc-----------cCCCCC-----ccccccceecCCcCCccc
Confidence 79999999875 3456 8999999999999854321 233221 124555555566677665
No 190
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=91.12 E-value=0.2 Score=37.10 Aligned_cols=32 Identities=28% Similarity=0.713 Sum_probs=21.8
Q ss_pred CCCCCCCeeecCCCCCCCeEeecCCCCCCCCCCc
Q psy9685 870 EPCQNGGTCHEDCRHQADYKCDCLPGWTGKNCTE 903 (979)
Q Consensus 870 ~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~ 903 (979)
+.|.| |+|.-. .....+.|.|..||+|.+|+.
T Consensus 18 ~yC~n-G~C~~i-~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYI-EHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEE-TTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEe-cCCCCeeEECCCCcccccccc
Confidence 45776 588622 124467888888888888874
No 191
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.12 E-value=0.081 Score=43.04 Aligned_cols=30 Identities=37% Similarity=0.918 Sum_probs=19.7
Q ss_pred CCCCCCCCEEee--CCCCcEEecCCCcccCccc
Q psy9685 645 SNPCMNGGQCED--RLAGFVCNCSEEYVGERCE 675 (979)
Q Consensus 645 ~~~C~~~g~C~~--~~~~~~C~C~~G~~G~~C~ 675 (979)
.+.|.++ +|.. ..+.+.|.|.+||+|.+|+
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred cCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 3456663 7742 2345678888888888876
No 192
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.97 E-value=0.094 Score=38.91 Aligned_cols=32 Identities=22% Similarity=0.484 Sum_probs=26.8
Q ss_pred CCCCCCCCccc--cCCCCeeeecCCCCCCCCcccc
Q psy9685 230 SRSYPSGGHCT--DLWRDFSCSCVRPFLGHTCQYN 262 (979)
Q Consensus 230 ~~pc~~~G~C~--~~~~~~~C~C~~~~~g~~C~~~ 262 (979)
.+.|.| |+|. ...+.+.|.|+.+|+|.+|+..
T Consensus 13 ~~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 13 KHYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TTSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred cCcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 367888 8996 5566799999999999999864
No 193
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=90.70 E-value=0.14 Score=49.25 Aligned_cols=29 Identities=28% Similarity=0.531 Sum_probs=25.0
Q ss_pred CCCCCCCeeeccCCCCeeecCCCCCCCCCCCC
Q psy9685 832 SDMCGNNGECINQPGDYKCACQFDTCGYLCNF 863 (979)
Q Consensus 832 ~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~ 863 (979)
...|.|+|.|+.. + +|.|++||.|..|+.
T Consensus 152 ~~~C~ngG~Cv~P-~--~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 152 PGGCRNGGFCNER-R--ICECPDGFHGPHCEG 180 (188)
T ss_dssp TTCCCTTCEECTT-S--CEECCTTCBTTTTCB
T ss_pred CCCCCCCCEeCCC-C--cccCcCCCCCCCCcC
Confidence 3679999999864 3 999999999999974
No 194
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=90.39 E-value=0.13 Score=49.37 Aligned_cols=39 Identities=28% Similarity=0.706 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCeeecCCCCCCCeEeecCCCCCCCCCCcCCCc
Q psy9685 866 PCKDEPCQNGGTCHEDCRHQADYKCDCLPGWTGKNCTEVPEY 907 (979)
Q Consensus 866 ~C~~~~C~~~g~C~~~c~~~~~~~C~C~~G~~G~~C~~~~~~ 907 (979)
.|...+|.++|.|. +....|.|.|.+||.|..|+...++
T Consensus 121 ~~~~~~C~~~g~C~---~~~~~~~c~C~~g~~g~~C~~~~~c 159 (164)
T 3cfw_A 121 SCQPWSCSGHGECV---EIINNYTCNCDVGYYGPQCQFVQVD 159 (164)
T ss_dssp CCCTTSSCSSEEEE---EETTEEEEEECTTCBSSSSCBC---
T ss_pred CCCCCcCCCCCeec---ccCCCceeeeCCCcccccccccccC
Confidence 35557788999999 4477899999999999999987654
No 195
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=89.72 E-value=1.9 Score=46.91 Aligned_cols=33 Identities=15% Similarity=0.031 Sum_probs=25.2
Q ss_pred ecCeeecCCCeeEEEEEee--cceeeeEEEEEccCCCc
Q psy9685 358 VGGVKLADGNNHLIQTISS--TGILDVQVLYLGGIPET 393 (979)
Q Consensus 358 ~~~~~l~DG~wH~V~~~~~--~~~l~l~vlyvGG~p~~ 393 (979)
.+...+.+|+||+|.+... .+. ..|||.|....
T Consensus 213 ~s~~~l~~g~W~HvA~t~d~~~~~---~~lYvNG~~~~ 247 (355)
T 4dqa_A 213 RVTKPLLTNRWYHVALTYDQPTGK---TGIYVNGEKWA 247 (355)
T ss_dssp ECSSCCCSSCEEEEEEEEETTTTE---EEEEETTEEEE
T ss_pred ccCCcccCCCEEEEEEEEECCCCE---EEEEECCEEEE
Confidence 3455899999999999998 443 34899887655
No 196
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=89.30 E-value=0.1 Score=49.68 Aligned_cols=35 Identities=26% Similarity=0.936 Sum_probs=25.6
Q ss_pred cCCCCCCCCCCEEeeCCCCcEEecCCCcccCcccc
Q psy9685 642 ECLSNPCMNGGQCEDRLAGFVCNCSEEYVGERCES 676 (979)
Q Consensus 642 ~C~~~~C~~~g~C~~~~~~~~C~C~~G~~G~~C~~ 676 (979)
.|...||.+++.|.+....|.|.|.+||+|..|+.
T Consensus 121 ~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 45556677777787777777788888888877764
No 197
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=89.16 E-value=0.7 Score=34.40 Aligned_cols=34 Identities=18% Similarity=0.247 Sum_probs=21.2
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhhhc
Q psy9685 913 VDLALLIIGPILAILLLGGLISMAVLCLMARQKR 946 (979)
Q Consensus 913 ~~~~~~~~~~~~~~lll~~l~~~~~~~~~~r~~r 946 (979)
.+++.+++.+++++++|.+++.+++++=..+|++
T Consensus 10 vp~wiIi~svl~GLllL~li~~~LwK~GFFkR~~ 43 (54)
T 2knc_A 10 IPIWWVLVGVLGGLLLLTILVLAMWKVGFFKRNR 43 (54)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCcccCCC
Confidence 4555656666666666666666777665555444
No 198
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=89.13 E-value=0.48 Score=35.13 Aligned_cols=35 Identities=20% Similarity=0.141 Sum_probs=21.5
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhhhhcc
Q psy9685 913 VDLALLIIGPILAILLLGGLISMAVLCLMARQKRG 947 (979)
Q Consensus 913 ~~~~~~~~~~~~~~lll~~l~~~~~~~~~~r~~r~ 947 (979)
.+++.+++.++++++++++++.++|++=..+|+++
T Consensus 7 vp~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~~ 41 (54)
T 2l8s_A 7 VPLWVILLSAFAGLLLLMLLILALWKIGFFKRPLK 41 (54)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCS
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCc
Confidence 44556566666666666666677776655554443
No 199
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=88.91 E-value=0.13 Score=48.83 Aligned_cols=35 Identities=31% Similarity=1.076 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCeeccCCCceeeecCCCCCCCccc
Q psy9685 603 DECVTHNCQNGARCIDGVARYSCECTPGWEGALCE 637 (979)
Q Consensus 603 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~ 637 (979)
+.|...||.+++.|.+.+..|.|.|.+||.|..|+
T Consensus 120 ~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce 154 (157)
T 1g1t_A 120 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCE 154 (157)
T ss_dssp CCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSC
T ss_pred CCCCCCCCCCCCEeecCCCCeeEECCCCccCcccc
Confidence 67888899999999999999999999999999885
No 200
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=88.80 E-value=0.25 Score=36.56 Aligned_cols=30 Identities=20% Similarity=0.655 Sum_probs=25.2
Q ss_pred CCCCCCCccc--cCCCCeeeecCCCCCCCCccc
Q psy9685 231 RSYPSGGHCT--DLWRDFSCSCVRPFLGHTCQY 261 (979)
Q Consensus 231 ~pc~~~G~C~--~~~~~~~C~C~~~~~g~~C~~ 261 (979)
+.|.| |+|. ...+.+.|.|+.+|+|.+|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 46777 5997 666789999999999999985
No 201
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=88.02 E-value=2.4 Score=41.31 Aligned_cols=84 Identities=10% Similarity=-0.027 Sum_probs=51.1
Q ss_pred cceeEEEEEEEeccC-----CeEEEEecCCCCCCCCCCCCCCCCccceEEEEEec--CEEEEEEEcCCcCceeeecCeee
Q psy9685 291 RNIVDISMFIRTRQL-----RGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEA--GELFVRLQFNSTPESYNVGGVKL 363 (979)
Q Consensus 291 ~~~~~is~~frT~~~-----~GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~--G~l~~~~~~g~~~~~~~~~~~~l 363 (979)
..++.++++||.... .||+|..... ...+-.+.|.. +.+++.-..++....+...+..+
T Consensus 63 ~~Df~le~dvk~~~~~~~g~~Gi~fR~~~d--------------~~~gY~~~i~~~~~~~~l~k~~~g~~~~L~~~~~~~ 128 (185)
T 4b1m_A 63 GSDFTYESDITIKDGNGRGAGALMFRSDKD--------------AKNGYLANVDAKHDLVKFFKFENGAASVIAEYKTPI 128 (185)
T ss_dssp ESSEEEEEEEEEEEEEEEEEEEEEEEECTT--------------SSSEEEEEEETTTTEEEEEEEETTEEEEEEEEECCC
T ss_pred ccCEEEEEEEEEcCCCCcceEEEEEEEcCC--------------CCCcEEEEEECCCCEEEEEEEeCCcEEEeeeccccC
Confidence 446777888776542 3777766221 33566666654 56555432333222233333578
Q ss_pred cCCCeeEEEEEeecceeeeEEEEEccCC
Q psy9685 364 ADGNNHLIQTISSTGILDVQVLYLGGIP 391 (979)
Q Consensus 364 ~DG~wH~V~~~~~~~~l~l~vlyvGG~p 391 (979)
..|+||++++...+..|. +||.|.+
T Consensus 129 ~~g~w~~l~I~~~G~~i~---~~vnG~~ 153 (185)
T 4b1m_A 129 DVNKKYHLKTEAEGDRFK---IYLDDRL 153 (185)
T ss_dssp CSSCCEEEEEEEETTEEE---EEETTEE
T ss_pred CCCCeEEEEEEEECCEEE---EEECCEE
Confidence 889999999999998754 5677754
No 202
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=87.55 E-value=0.13 Score=49.02 Aligned_cols=46 Identities=30% Similarity=0.553 Sum_probs=33.8
Q ss_pred CcCCCCccccCcccccC-CCCCCCCeeeccCCCCeeecCCCCCC----CCCCC
Q psy9685 815 GYTGEMCEIDINECELS-SDMCGNNGECINQPGDYKCACQFDTC----GYLCN 862 (979)
Q Consensus 815 g~~G~~C~~~~~~C~~~-~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~ 862 (979)
||.......++++|... ...|.+ .|.+..|+|.|.|++||. |..|+
T Consensus 107 GF~~~y~~~d~~eC~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 107 GFAAYYVATDINECTDFVDVPCSH--FCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp EEEEEEEEEECCTTTC-CCCCSSS--EEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred cceeeeecccCcccCCCCCCCCCC--cccCcCCCEEEecCCCcEECCCCCccc
Confidence 66655555688999653 346754 799999999999999996 55554
No 203
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=87.38 E-value=0.24 Score=52.30 Aligned_cols=43 Identities=28% Similarity=0.592 Sum_probs=33.0
Q ss_pred cCcccccC-CCCCCCCeeeccCCCCeeecCCCCC----CCCCCCCCCCCC
Q psy9685 824 DINECELS-SDMCGNNGECINQPGDYKCACQFDT----CGYLCNFPDPCK 868 (979)
Q Consensus 824 ~~~~C~~~-~~~C~~~g~C~~~~gs~~C~C~~g~----~G~~C~~~~~C~ 868 (979)
+.|||... +..|.+ .|.++.++|.|.|..|| .+..|...++|.
T Consensus 1 ~~~eC~~~~~~~C~~--~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 1 AKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp --CCCCSSCSSSCSS--BCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred CCCccCCCCCCCCCC--EeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 35788776 678987 89999999999999998 366777666553
No 204
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=86.60 E-value=0.11 Score=60.70 Aligned_cols=46 Identities=24% Similarity=0.536 Sum_probs=38.6
Q ss_pred ccCCCCcCCCCccccCcccccCCCCCCCCeeeccCCCCeeecCCCCCCCCCCCC
Q psy9685 810 TTPILGYTGEMCEIDINECELSSDMCGNNGECINQPGDYKCACQFDTCGYLCNF 863 (979)
Q Consensus 810 C~C~~g~~G~~C~~~~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~G~~C~~ 863 (979)
..|.+||.|.+|.+ -..| +..|.++|.|+ ..+|.|.+||.|..|+.
T Consensus 520 ~~C~~gw~g~dc~i-~~~C---p~~C~ghG~C~----~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 520 FDKQQTWAIDNVYI-GDGC---LDMCSGHGRCV----QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CCTTCCEEEEEEEE-ESCS---SGGGGGSEEEE----TTEEEECTTEESTTSCE
T ss_pred CccCCCcccccccc-cCCC---CcccCCCcEEC----CCCEeeCCCccCCCcCc
Confidence 48999999999962 2667 45899999997 99999999999999874
No 205
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=86.29 E-value=0.16 Score=59.33 Aligned_cols=29 Identities=24% Similarity=0.597 Sum_probs=23.1
Q ss_pred CCCCCCCccccCCCCeeeecCCCCCCCCcccc
Q psy9685 231 RSYPSGGHCTDLWRDFSCSCVRPFLGHTCQYN 262 (979)
Q Consensus 231 ~pc~~~G~C~~~~~~~~C~C~~~~~g~~C~~~ 262 (979)
..|.++|.|++ .-.|.|..+|.|+.|...
T Consensus 190 ~~C~g~G~C~~---~~~C~C~~g~~g~~C~~~ 218 (725)
T 2e26_A 190 EMCYGHGSCIN---GTKCICDPGYSGPTCKIS 218 (725)
T ss_dssp GGGGGSEEEET---TTEEEECTTEESTTSCEE
T ss_pred cccCCCcEecC---CCeeeccCCcccCccccC
Confidence 36888899943 348999999999999853
No 206
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=85.04 E-value=0.18 Score=48.79 Aligned_cols=84 Identities=5% Similarity=-0.041 Sum_probs=50.5
Q ss_pred eeEEEEEEEEeCC-----CCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEE--eCcEEEEE-EEeCCcceEEeecCeee
Q psy9685 95 NIVDISMFIRTRQ-----LRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEM--EAGELFVR-LQFNSTPESYNVGGVKL 166 (979)
Q Consensus 95 ~~~~isl~FrT~~-----~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L--~~G~l~~~-~~~g~~~~~~~~~~~~l 166 (979)
..+.++++++... ..||+|.... ....+..+.| .++++++. +..|.. ..+.....++
T Consensus 43 ~df~le~~v~~~~~~~~~~~Gi~fR~~~--------------d~~~~Y~~~i~~~~~~~~l~~~~~G~~-~~l~~~~~~~ 107 (172)
T 4azz_A 43 SDFTYESDITIKDGNGRGAGALMFRSDK--------------DAKNGYLANVDAKHDLVKFFKFENGAA-SVIAEYKTPI 107 (172)
Confidence 5566777776542 3356555321 0234555555 34445442 222222 2222344578
Q ss_pred cCCCcEEEEEEEEceEEEEEECCEEeE
Q psy9685 167 ADGNNHLIQVVRNVTLVQVKLNGTEYF 193 (979)
Q Consensus 167 nDg~WH~V~v~r~~~~~~L~VD~~~~~ 193 (979)
..|+||+|+|...+..+++.|||..+.
T Consensus 108 ~~g~w~~l~I~~~G~~i~~~vnG~~v~ 134 (172)
T 4azz_A 108 DVNKKYHLKTEAEGDRFKIYLDDRLVI 134 (172)
Confidence 899999999999999999999996553
No 207
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=83.99 E-value=10 Score=44.88 Aligned_cols=90 Identities=12% Similarity=0.159 Sum_probs=55.5
Q ss_pred cceeEEEEEEEeccCCe--EEEEecCCCCCCCCCCCCCCCCccceEEEEEe-cCEEEEEEEcCCcCceeee-cCeeec--
Q psy9685 291 RNIVDISMFIRTRQLRG--AIFYLGGSGDRSSPSSNGAGSEETSYIAAEME-AGELFVRLQFNSTPESYNV-GGVKLA-- 364 (979)
Q Consensus 291 ~~~~~is~~frT~~~~G--lLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~-~G~l~~~~~~g~~~~~~~~-~~~~l~-- 364 (979)
..+++|.|+||+...+. .||.+... .......||+|+|. +|.+.+.+....+...... ....|-
T Consensus 34 l~~~Ti~~~~~~~~~~~~~~lfs~s~~----------~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~ 103 (679)
T 2sli_A 34 MTQGTIILSYKSTSENGIQSLFSVGNS----------TAGNQDRHFHIYITNSGGIGIELRNTDGVFNYTLDRPASVRAL 103 (679)
T ss_dssp CSSEEEEEEEEECCCCSEEEEEEEECC----------STTCTTEEEEEEEETTSCEEEEEEECTTTCEEEEEESSCCCSE
T ss_pred ccCeEEEEEEEcCCCCCceEEEEeecC----------CccccCcceEEEEcCCCeEEEEEecCCCCeeeecccccccccc
Confidence 56789999999987653 45555443 11113479999997 5788787665544322221 222333
Q ss_pred -CC--CeeEEEEEeec--ceeeeEEEEEccCCCc
Q psy9685 365 -DG--NNHLIQTISST--GILDVQVLYLGGIPET 393 (979)
Q Consensus 365 -DG--~wH~V~~~~~~--~~l~l~vlyvGG~p~~ 393 (979)
.| .||+|.+.... +. ..||+-|....
T Consensus 104 ~~~~~~~~~va~~~~~~~~~---~~lyvnG~~v~ 134 (679)
T 2sli_A 104 YKGERVFNTVALKADAANKQ---CRLFANGELLA 134 (679)
T ss_dssp ETTEECCEEEEEEEETTTTE---EEEEETTEEEE
T ss_pred cCCCceeEEEEEEEECCCCe---EEEEECCEEeE
Confidence 25 69999888763 33 24888886544
No 208
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=83.83 E-value=7.2 Score=45.82 Aligned_cols=92 Identities=12% Similarity=0.042 Sum_probs=61.1
Q ss_pred eeEEEEEEEEeCCC-CeE--EEEecCCCCCCCCCCCCCCCCCCCEEEEEE-eCcEEEEEEEeCCcceEEeecCeeecCCC
Q psy9685 95 NIVDISMFIRTRQL-RGA--IFYLGGSGDRSSPSSNGAGSEETSYIAAEM-EAGELFVRLQFNSTPESYNVGGVKLADGN 170 (979)
Q Consensus 95 ~~~~isl~FrT~~~-~Gl--Lly~~~~~~~~~~~~~~~~~~~~dfi~l~L-~~G~l~~~~~~g~~~~~~~~~~~~lnDg~ 170 (979)
+...|+..|+-..+ .|- |..+.+.. + .......++.+.| .+|.+++.-++++ ..++......+..++
T Consensus 529 tdytVs~Dv~~~~~~~g~a~i~~Rv~~~--g------~~~~~~~gy~~~i~~~G~~~l~~~~~~-~~vLa~g~~~~~~~~ 599 (656)
T 3zr5_A 529 TNMTVQCDVYIETPRSGGVFIAGRVNKG--G------ILIRSATGVFFWIFANGSYRVTADLGG-WITYASGHADVTAKR 599 (656)
T ss_dssp CEEEEEEEEEECSTTTCEEEEEEEECCC--G------GGGGGCEEEEEEEETTTEEEEEEETTC-CSEEEEEECSCCTTC
T ss_pred ccEEEEEEEEeccCCCCcEEEEEEEcCC--C------CCccccceEEEEEEcCCEEEEEEecCC-eEEEEEEEecCCCCc
Confidence 45678888887663 232 44443210 0 0001223455555 5999999887765 355555445899999
Q ss_pred cEEEEEEEEceEEEEEECCEEeEEE
Q psy9685 171 NHLIQVVRNVTLVQVKLNGTEYFRK 195 (979)
Q Consensus 171 WH~V~v~r~~~~~~L~VD~~~~~~~ 195 (979)
||+++|+-.+..++..|||..+...
T Consensus 600 w~~L~l~~~G~~i~~~ldG~~v~~~ 624 (656)
T 3zr5_A 600 WYTLTLGIKGYFAFGMLNGTILWKN 624 (656)
T ss_dssp EEEEEEEEETTEEEEEETTEEEEEE
T ss_pred eEEEEEEEECCEEEEEECCEEEEEE
Confidence 9999999999999999999876554
No 209
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=81.22 E-value=0.49 Score=51.62 Aligned_cols=36 Identities=28% Similarity=0.745 Sum_probs=20.8
Q ss_pred CcccccCCCCCCCCeeeccCCCCeeecCCCCCC----CCCCCC
Q psy9685 825 INECELSSDMCGNNGECINQPGDYKCACQFDTC----GYLCNF 863 (979)
Q Consensus 825 ~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~----G~~C~~ 863 (979)
+|||. .+..|++ .|.|++|+|+|.|.+||. +..|..
T Consensus 1 i~ec~-~~~~C~~--~C~n~~g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 1 VNECA-EEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp ---------CCSS--EECCC---CCEECCTTEEECTTSSCEEE
T ss_pred CcccC-CCCCCcC--eeecCCCCeEEECCCCccCCCCCCcccc
Confidence 46886 4677987 899999999999999994 566753
No 210
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=80.54 E-value=1.4 Score=30.96 Aligned_cols=31 Identities=16% Similarity=0.195 Sum_probs=16.8
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHHhhh
Q psy9685 913 VDLALLIIGPILAILLLGGLISMAVLCLMAR 943 (979)
Q Consensus 913 ~~~~~~~~~~~~~~lll~~l~~~~~~~~~~r 943 (979)
.+++.+++..+++++++.+++.+++++=..+
T Consensus 8 vp~wiIi~s~l~GLllL~li~~~LwK~GFFk 38 (42)
T 2k1a_A 8 IPIWWVLVGVLGGLLLLTILVLAMWKVGFFK 38 (42)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 4455555555566666655555555553333
No 211
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=80.24 E-value=11 Score=44.67 Aligned_cols=89 Identities=19% Similarity=0.248 Sum_probs=55.2
Q ss_pred ceeEEEEEEEeccCCe--EEEEecCCCCCCCCCCCCCCCCccceEEEEEe-cCEEEEEEEcCCcCceee-ecCeeec---
Q psy9685 292 NIVDISMFIRTRQLRG--AIFYLGGSGDRSSPSSNGAGSEETSYIAAEME-AGELFVRLQFNSTPESYN-VGGVKLA--- 364 (979)
Q Consensus 292 ~~~~is~~frT~~~~G--lLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~-~G~l~~~~~~g~~~~~~~-~~~~~l~--- 364 (979)
.+++|.|+|++...+. .||.+... ...+...|++|.|. +|++.+.+....+..... ..+..+.
T Consensus 57 ~~~T~~~~~~~~~~~~~~~lfs~sn~----------~~~~~~~~~~~~i~~~g~~~~~~r~~~~~~~~~~~~~~~~~~~~ 126 (686)
T 2jkb_A 57 ESQTVVMKFKADKPNSLQALFGLSNS----------KAGFKNNYFSIFMRDSGEIGVEIRDAQKGINYLFSRPASLWGKH 126 (686)
T ss_dssp SCEEEEEEEECSSCCSEEEEEEEECC----------STTCTTCEEEEEEETTSCEEEEEEETTTTEEEEEEESSCCCCEE
T ss_pred CceEEEEEEEccCCCCeeEEEEeecC----------cccccCcceEEEEcCCCeEEEEEecCCCCeeeeccccccccccc
Confidence 6689999999976542 45555442 11123589999996 888888876554432111 1122233
Q ss_pred CC--CeeEEEEEee--cceeeeEEEEEccCCCc
Q psy9685 365 DG--NNHLIQTISS--TGILDVQVLYLGGIPET 393 (979)
Q Consensus 365 DG--~wH~V~~~~~--~~~l~l~vlyvGG~p~~ 393 (979)
.| .||+|.+... .+. ..|||-|....
T Consensus 127 ~~~~~~~~va~~~d~~~~~---~~lyvnG~~v~ 156 (686)
T 2jkb_A 127 KGQAVENTLVFVSDSKDKT---YTMYVNGIEVF 156 (686)
T ss_dssp TTEECCEEEEEEEETTTTE---EEEEETTEEEE
T ss_pred cCCcceeEEEEEEECCCCe---EEEEECCEEEE
Confidence 45 7999998876 333 24888886554
No 212
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=77.92 E-value=1.6 Score=33.50 Aligned_cols=26 Identities=31% Similarity=0.773 Sum_probs=18.6
Q ss_pred CEEeeCC-CCcEEecCCCcc----cCccccc
Q psy9685 652 GQCEDRL-AGFVCNCSEEYV----GERCESL 677 (979)
Q Consensus 652 g~C~~~~-~~~~C~C~~G~~----G~~C~~~ 677 (979)
..|++.. ++|.|.|++||. +..|.+.
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~ 41 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAENQKSCEPA 41 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTTSSCEEES
T ss_pred CEeEeCCCCCEEeeCCCCcEECCCCCcccCC
Confidence 4688877 588888888886 4556543
No 213
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=76.57 E-value=0.88 Score=43.13 Aligned_cols=43 Identities=21% Similarity=0.576 Sum_probs=31.7
Q ss_pred CCCCCCCccccCCCCCC---CCCCCCceEecCCCCeEEecCCCCcCCC
Q psy9685 712 PGYRGSRCEINIDECAS---GPCKNSGQCIDDVNAFICNCTNTATGAS 756 (979)
Q Consensus 712 ~G~~G~~C~~~~~~C~~---~~C~~~g~C~~~~g~~~C~C~~g~~g~~ 756 (979)
.||.......++++|.. .+|. +.|.+..++|+|.|++||.+..
T Consensus 106 ~GF~~~y~~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~~ 151 (159)
T 1nzi_A 106 TGFAAYYVATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLHD 151 (159)
T ss_dssp CEEEEEEEEEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEECT
T ss_pred ccceeeeecccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEECC
Confidence 45654444457888975 2464 5899999999999999998643
No 214
>1s4x_A Integrin beta-3; cell adhesion; NMR {Homo sapiens} SCOP: j.60.1.1 PDB: 2ljd_A* 2lje_A* 2ljf_A*
Probab=75.08 E-value=0.14 Score=40.17 Aligned_cols=36 Identities=8% Similarity=-0.025 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhhhhhccccCCCCCCCccccCCceee
Q psy9685 928 LLGGLISMAVLCLMARQKRGRRGTYSPSSQEYCNPRVEM 966 (979)
Q Consensus 928 ll~~l~~~~~~~~~~r~~r~~~~~~~~~~~e~~~~~~~~ 966 (979)
|++++++++|+++....+|+ +|+.++.|..++++++
T Consensus 11 liGl~lLliwKll~~i~Drr---EyakFE~Er~~akw~~ 46 (67)
T 1s4x_A 11 SGLVPRGSHMKLLITIHDRK---EFAKFEEERARAKWDT 46 (67)
T ss_dssp ----------CHHHHHHHHH---HHHHHHHHHTTTTTCS
T ss_pred HHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHccccc
Confidence 34555566677777777766 5666677777777655
No 215
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=73.71 E-value=5.4 Score=33.16 Aligned_cols=66 Identities=21% Similarity=0.476 Sum_probs=47.4
Q ss_pred cCCCCCCCCceecCCCCCCCCCCCCeecCCCCCC--CCCcccc-CCCCCC--CCCCCCceEecCC-CCeEEecCCCC
Q psy9685 682 CADQPCYFGAVCQDTKISPYFPQGPICDCPPGYR--GSRCEIN-IDECAS--GPCKNSGQCIDDV-NAFICNCTNTA 752 (979)
Q Consensus 682 c~~~~C~~~~~C~~~~~~~~~~~~~~C~C~~G~~--G~~C~~~-~~~C~~--~~C~~~g~C~~~~-g~~~C~C~~g~ 752 (979)
|....|..++.|..-. .+...|+|..+|. |..|..+ ...|.. +-|+.+++|.... ..-.|.|...+
T Consensus 7 C~~tkcp~NA~Cyr~~-----dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~ 78 (95)
T 1b9w_A 7 CIDTNVPENAACYRYL-----DGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEG 78 (95)
T ss_dssp CSSCCCCTTEEEEECT-----TSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTT
T ss_pred cccCCCCCCcCeEEEc-----CCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCCC
Confidence 4455677777776542 4567899999997 7778643 246764 3499999998776 67799998754
No 216
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=73.68 E-value=1.1 Score=51.69 Aligned_cols=24 Identities=17% Similarity=0.459 Sum_probs=13.8
Q ss_pred CCCCceEecCCCCeEEecCCCCcCCC
Q psy9685 731 CKNSGQCIDDVNAFICNCTNTATGAS 756 (979)
Q Consensus 731 C~~~g~C~~~~g~~~C~C~~g~~g~~ 756 (979)
|...|.+....| +|.|.+||...+
T Consensus 252 C~~dG~w~~p~G--~C~C~~G~e~~~ 275 (536)
T 3fl7_A 252 CAVDGEWLVPIG--QCLCQAGYEKVE 275 (536)
T ss_dssp ECTTSCBCCCBC--CCEECTTEEEET
T ss_pred EcCCCCEecccC--cEeccCccccCC
Confidence 444555544444 677777776444
No 217
>3u1x_A Putative glycosyl hydrolase; glycosyl hydrolysis, carbohydrate metabolism,, structural GE joint center for structural genomics, JCSG; HET: MSE PGE; 1.70A {Parabacteroides distasonis}
Probab=72.02 E-value=6.3 Score=39.95 Aligned_cols=33 Identities=21% Similarity=0.115 Sum_probs=28.4
Q ss_pred eecCCCcEEEEEEEEceEEEEEECCEEeEEEec
Q psy9685 165 KLADGNNHLIQVVRNVTLVQVKLNGTEYFRKTI 197 (979)
Q Consensus 165 ~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~ 197 (979)
....|+|.+.+|+-.+..+++.|+|..+.....
T Consensus 156 ~~p~geWN~~~I~~~g~~i~v~lNG~~V~~~~~ 188 (236)
T 3u1x_A 156 VNPPGEWNSSMVLYKDGYVEHWLNGEKLFSFQE 188 (236)
T ss_dssp CCCTTSCEEEEEEEETTEEEEEETTEEEEEEET
T ss_pred CCCCCceEEEEEEEECCEEEEEECCEEEEEEec
Confidence 456899999999999999999999988765543
No 218
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=71.06 E-value=51 Score=38.91 Aligned_cols=110 Identities=8% Similarity=0.097 Sum_probs=67.0
Q ss_pred cccccccCCCeeEEEEeCccccccceeeEEEEEEEEeCCCC---eEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcE
Q psy9685 69 ATFGHENTTNSLVTVAVGGVARRAVRNIVDISMFIRTRQLR---GAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGE 145 (979)
Q Consensus 69 ~~Fg~~~~~~s~~~~~~~~~~~~~~~~~~~isl~FrT~~~~---GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~ 145 (979)
-+|.+.+ ++..+.++. +...-.+...|+|+|.+|...-+ =.|+-.-. ...=-.+.+.++.
T Consensus 878 nAf~L~g-Sk~~I~l~N-Dii~N~ltnnFSISFWVRipk~~~~eyTIIg~~~---------------nNsGW~ISf~~n~ 940 (1196)
T 3v0a_B 878 DALYLNG-SNQSISFSN-DFFENGLTNSFSIYFWLRNLGKDTIKSKLIGSKE---------------DNCGWEIYFQDTG 940 (1196)
T ss_dssp EEEEECS-SSCCEEEEC-GGGGCCSSCCEEEEEEEEECCCCCSCEEEEEEEE---------------TTEEEEEEEETTE
T ss_pred ceEEecC-CceeEEccc-chhhcccccceEEEEEEEcCCcCCccceEEEeec---------------CCCCcEEEECCCe
Confidence 3455532 344455544 12222455789999999975433 22332111 1111356668999
Q ss_pred EEEEEEeCCcceE-EeecCeeecCCCcEEEEEEEEc--eEEEEEECCEEeEEEec
Q psy9685 146 LFVRLQFNSTPES-YNVGGVKLADGNNHLIQVVRNV--TLVQVKLNGTEYFRKTI 197 (979)
Q Consensus 146 l~~~~~~g~~~~~-~~~~~~~lnDg~WH~V~v~r~~--~~~~L~VD~~~~~~~~~ 197 (979)
+.+.+.-..|... +..+ .+.+|+||.|+|+-+. ..+.+.|||........
T Consensus 941 LIWtl~DsnGn~knI~f~--dy~~NkWyfITISvDRLGnalkIYINGkLv~~~sI 993 (1196)
T 3v0a_B 941 LVFNMIDSNGNEKNIYLS--DVSNNSWHYITISVDRLKEQLLIFIDDNLVANESI 993 (1196)
T ss_dssp EEEEEECTTCCEEEEEEC--SCCSSSCEEEEEEEETTTTEEEEEETTEEEEEEEC
T ss_pred EEEEEEcCCCcccceEec--cccCCcEEEEEEEEcCCCceeEEEECCEEeechhh
Confidence 9998885555332 2223 6889999999999883 45599999987766654
No 219
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=65.77 E-value=2.1 Score=49.25 Aligned_cols=16 Identities=25% Similarity=0.349 Sum_probs=11.5
Q ss_pred CCCCeEEecCCCCcCC
Q psy9685 740 DVNAFICNCTNTATGA 755 (979)
Q Consensus 740 ~~g~~~C~C~~g~~g~ 755 (979)
..|++.|.|.+||...
T Consensus 306 ~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 306 PEGATSCECEEGFFRA 321 (536)
T ss_dssp CTTCSSCEECTTCBCC
T ss_pred CCCccEEEEecccccc
Confidence 4577788888887654
No 220
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=64.78 E-value=53 Score=32.77 Aligned_cols=61 Identities=8% Similarity=0.085 Sum_probs=42.8
Q ss_pred EEEEEEeCcEEEEEEEeCCc-----ceEEee--cCeeecCCCcEEEEEEEEc-----eEEEEEECCEEeEEEe
Q psy9685 136 YIAAEMEAGELFVRLQFNST-----PESYNV--GGVKLADGNNHLIQVVRNV-----TLVQVKLNGTEYFRKT 196 (979)
Q Consensus 136 fi~l~L~~G~l~~~~~~g~~-----~~~~~~--~~~~lnDg~WH~V~v~r~~-----~~~~L~VD~~~~~~~~ 196 (979)
.+++.|.+.+|..++..|.- ....+. ...+|.-|+||+|.|.-.= ..+.|.+||..+....
T Consensus 109 ~~~~~v~G~~l~~r~~sgt~~~p~~~~~~~~~~~l~~v~~G~Wh~iVihvkWs~d~~Gf~~vW~dG~~v~~~~ 181 (238)
T 2zzj_A 109 STMIWIQNNQLYSRYVNGHYRQPNCGRNIVTRPNLATVSAGAWHRVVLQIKWASDNTGYFKIWFDGAKVHEEY 181 (238)
T ss_dssp EEEEEEETTEEEEEEEEECCBTTBCCEEEEEEEEEEECCTTSCEEEEEEEEECSSTTEEEEEEETTEEEEEEE
T ss_pred ceeEEEeCCEEEEEeecccccccCcCccceeccccccccCCceEEEEEEEEEeCCCCcEEEEEECCEEEEeec
Confidence 45678889999888876642 111111 2458999999999987643 6779999998765554
No 221
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=63.78 E-value=3.2 Score=43.51 Aligned_cols=34 Identities=15% Similarity=0.402 Sum_probs=24.4
Q ss_pred CCCCCCC-CCCCCceEecCCCCeEEecCCCCcCCC
Q psy9685 723 IDECASG-PCKNSGQCIDDVNAFICNCTNTATGAS 756 (979)
Q Consensus 723 ~~~C~~~-~C~~~g~C~~~~g~~~C~C~~g~~g~~ 756 (979)
.|||... +-.....|.++.++|+|.|.+||....
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~ 36 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGE 36 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECT
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCC
Confidence 5677643 222246899999999999999997653
No 222
>1a8d_A Tetanus neurotoxin; clostridial, ganglioside binding region; 1.57A {Clostridium tetani} SCOP: b.29.1.6 b.42.4.2 PDB: 1af9_A 1fv3_A* 1fv2_A* 3hmy_A* 3hn1_A* 1d0h_A* 1dfq_A* 1dll_A* 1yxw_A* 1yyn_A* 1diw_A*
Probab=62.36 E-value=48 Score=36.09 Aligned_cols=59 Identities=12% Similarity=0.034 Sum_probs=36.9
Q ss_pred eEEEEEecCEEEEEEEcCCcCce-ee--ecCeeec---CCCeeEEEEEeecceeeeEEEEEccCCCc
Q psy9685 333 YIAAEMEAGELFVRLQFNSTPES-YN--VGGVKLA---DGNNHLIQTISSTGILDVQVLYLGGIPET 393 (979)
Q Consensus 333 ~l~l~l~~G~l~~~~~~g~~~~~-~~--~~~~~l~---DG~wH~V~~~~~~~~l~l~vlyvGG~p~~ 393 (979)
-..+.|.++.+.+.+....+... +. .....+. ||+||.|++...+..-. -+|+-|.-..
T Consensus 127 GW~I~l~gn~liw~l~Dsng~~~~i~f~~~~~~Isd~~~nkW~fVtItvDR~g~~--~IYING~Lv~ 191 (452)
T 1a8d_A 127 GWSVSLKGNNLIWTLKDSAGEVRQITFRDLPDKFNAYLANKWVFITITNDRLSSA--NLYINGVLMG 191 (452)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECCSBTTSCSSSSSCEEEEEEECTTSEE--EEEETTEEEE
T ss_pred CeEEEeCCCeEEEEEEcCCCceeeEEeccccccCccccCCeEEEEEEEECCCCCE--EEEECCEEee
Confidence 45667788888888876554432 11 1233344 79999999887743322 6898885433
No 223
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=62.35 E-value=6.7 Score=26.94 Aligned_cols=10 Identities=40% Similarity=0.770 Sum_probs=4.1
Q ss_pred hhhhhHHHHH
Q psy9685 919 IIGPILAILL 928 (979)
Q Consensus 919 ~~~~~~~~ll 928 (979)
+.+++++.++
T Consensus 13 IAGiVvG~v~ 22 (38)
T 2k1k_A 13 IVAVIFGLLL 22 (38)
T ss_dssp HHHHHHHHHH
T ss_pred eeeeehHHHH
Confidence 3444444433
No 224
>3imm_A Putative secreted glycosylhydrolase; YP_001301887.1, putative glycosyl hydrolase; HET: MSE; 2.00A {Parabacteroides distasonis atcc 8503}
Probab=60.37 E-value=11 Score=37.21 Aligned_cols=28 Identities=18% Similarity=0.181 Sum_probs=25.3
Q ss_pred CCCcEEEEEEEEceEEEEEECCEEeEEE
Q psy9685 168 DGNNHLIQVVRNVTLVQVKLNGTEYFRK 195 (979)
Q Consensus 168 Dg~WH~V~v~r~~~~~~L~VD~~~~~~~ 195 (979)
.|+|.+.+|+-.+.++++.|+|..+...
T Consensus 119 ~GeWN~~~I~~~g~~i~v~lNG~~V~~~ 146 (201)
T 3imm_A 119 PGEWNHMRIKCAGQHIMVILNGKKVTEM 146 (201)
T ss_dssp TTSEEEEEEEEETTEEEEEETTEEEEEE
T ss_pred CCeeEEEEEEEECCEEEEEECCEEEEEE
Confidence 8999999999999999999999887543
No 225
>2nyy_A Botulinum neurotoxin type A; neurotoxin, FAB, protein antibody complex, toxin- system complex; 2.61A {Clostridium botulinum} PDB: 2nz9_A 3bta_A 3v0a_A* 3v0b_A 3v0c_A 3zus_A 3zur_A
Probab=59.71 E-value=2.6e+02 Score=34.26 Aligned_cols=115 Identities=15% Similarity=0.115 Sum_probs=69.4
Q ss_pred ccccccccCCCeeEEEEeCccccc-cceeeEEEEEEEEeCCC-------C-eEEEEecCCCCCCCCCCCCCCCCCCCEEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARR-AVRNIVDISMFIRTRQL-------R-GAIFYLGGSGDRSSPSSNGAGSEETSYIA 138 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~-~~~~~~~isl~FrT~~~-------~-GlLly~~~~~~~~~~~~~~~~~~~~dfi~ 138 (979)
.-+|.+.++..|.+.+...+..-. .+...|+|+|++|...- + =.|+=.-. ...=-.
T Consensus 910 gna~~L~~~~~S~~~V~~~ndiiyN~~~~nFSIsFWvRipk~~~~~~~~neyTIIg~~~---------------nNsGW~ 974 (1295)
T 2nyy_A 910 KNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCME---------------NNSGWK 974 (1295)
T ss_dssp TTCEEEESSTTSCEEEEECGGGCCTTTTSEEEEEEEEECCCCCSGGGGGCCEEEEEEEE---------------TTEEEE
T ss_pred CceEEeccCCCcceeEeccccceeccccCceEEEEEEEcCCcccccccCCcceEEEeec---------------CCCCcE
Confidence 445666545567777776444333 45578999999997421 1 12221110 011135
Q ss_pred EEEeCcEEEEEEEeCCcc-eEEee---cCeeec--CCCcEEEEEEEE-ceEEEEEECCEEeEEEec
Q psy9685 139 AEMEAGELFVRLQFNSTP-ESYNV---GGVKLA--DGNNHLIQVVRN-VTLVQVKLNGTEYFRKTI 197 (979)
Q Consensus 139 l~L~~G~l~~~~~~g~~~-~~~~~---~~~~ln--Dg~WH~V~v~r~-~~~~~L~VD~~~~~~~~~ 197 (979)
|.|.++.+.+.+.--.|. +.+.. ....+. -|+||.|+|+-+ .+...+.|||........
T Consensus 975 Is~~~n~LIWtl~Dsng~~k~I~f~y~~~~nisdyiNkW~fVTITndRlgna~IYINGkLi~~~~I 1040 (1295)
T 2nyy_A 975 VSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPI 1040 (1295)
T ss_dssp EEEETTEEEEEEECSSSCEEEEEEECCSBSSSCSSTTSCEEEEEEEETTSEEEEEETTEEEEEEEC
T ss_pred EEECCCeEEEEEecCCCccceEEEecccccchhhccCceEEEEEEEcCCCceeEEECCEEeeccee
Confidence 667899998888765442 21221 122233 299999999999 477799999987766643
No 226
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=59.39 E-value=3 Score=45.19 Aligned_cols=31 Identities=32% Similarity=0.713 Sum_probs=17.5
Q ss_pred CCCCC-CCCCCCCceEecCCCCeEEecCCCCcCC
Q psy9685 723 IDECA-SGPCKNSGQCIDDVNAFICNCTNTATGA 755 (979)
Q Consensus 723 ~~~C~-~~~C~~~g~C~~~~g~~~C~C~~g~~g~ 755 (979)
+|||. .+.|+ ..|.|+.|+|+|.|++||...
T Consensus 1 i~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~l~ 32 (349)
T 3v64_C 1 VNECAEEGYCS--QGCTNSEGAFQCWCEAGYELR 32 (349)
T ss_dssp --------CCS--SEECCC---CCEECCTTEEEC
T ss_pred CcccCCCCCCc--CeeecCCCCeEEECCCCccCC
Confidence 36675 23464 489999999999999999854
No 227
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=57.70 E-value=3.2 Score=27.81 Aligned_cols=18 Identities=28% Similarity=0.311 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHhhhh
Q psy9685 927 LLLGGLISMAVLCLMARQ 944 (979)
Q Consensus 927 lll~~l~~~~~~~~~~r~ 944 (979)
+++++++++.+.++++||
T Consensus 17 lll~vii~l~~~~~iRRr 34 (35)
T 1iij_A 17 VLLFLILVVVVGILIKRR 34 (35)
T ss_dssp HHHHHHHTTTTTHHHHHC
T ss_pred HHHHHHHHHHhheEEeec
Confidence 333333333344444443
No 228
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=56.30 E-value=15 Score=30.56 Aligned_cols=31 Identities=10% Similarity=0.127 Sum_probs=22.2
Q ss_pred CCCCCCCCCCceEecC-CCCeEEecCCCCcCC
Q psy9685 725 ECASGPCKNSGQCIDD-VNAFICNCTNTATGA 755 (979)
Q Consensus 725 ~C~~~~C~~~g~C~~~-~g~~~C~C~~g~~g~ 755 (979)
.|....|..++.|... .+.-+|+|..+|.-.
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~ 37 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKED 37 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEE
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEec
Confidence 3555568888999874 467789998877543
No 229
>1epw_A Bontoxilysin B, botulinum neurotoxin type B; zinc, metalloprotease, transmembrane, hydrolase; 1.90A {Clostridium botulinum} SCOP: b.29.1.6 b.42.4.2 d.92.1.7 h.4.2.1 PDB: 1f31_A* 1g9a_A* 1g9b_A* 1g9c_A* 1g9d_A* 1i1e_A* 1s0b_A 1s0c_A 1s0d_A 1s0e_A 1s0f_A 1s0g_A 2np0_A 3zuq_A 2etf_A 2xhl_A 1z0h_A 2nm1_A 3g94_A 1f82_A ...
Probab=53.59 E-value=2.6e+02 Score=34.23 Aligned_cols=114 Identities=13% Similarity=0.059 Sum_probs=72.0
Q ss_pred ccccccccCCCeeEEEEeCccccc-cceeeEEEEEEEEeCCC--C---------eEEEEecCCCCCCCCCCCCCCCCCCC
Q psy9685 68 AATFGHENTTNSLVTVAVGGVARR-AVRNIVDISMFIRTRQL--R---------GAIFYLGGSGDRSSPSSNGAGSEETS 135 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~~-~~~~~~~isl~FrT~~~--~---------GlLly~~~~~~~~~~~~~~~~~~~~d 135 (979)
.-+|.+.++..|.+.+...+..-. .+...|+|+|++|...- + =.|+=.-. ...
T Consensus 895 ~na~~L~~~~~S~v~V~~~ndii~N~~~~nFSIsFWiRipk~~~~~it~y~~nEyTiIg~~~---------------nNs 959 (1290)
T 1epw_A 895 KNQFKLTSSANSKIRVTQNQNIIFNSVFLDFSVSFWIRIPKYKNDGIQNYIHNEYTIINCMK---------------NNS 959 (1290)
T ss_dssp TSEEEECSSTTCCEEEECCTTSSCCCSSCCEEEEEEEECCCCCGGGHHHHHHCEEEEEEEEE---------------TTE
T ss_pred CceEEecCCCCcceeEecccchhhcccccceeEEEEEEcCCccccccccccCCCceEEEEec---------------CCC
Confidence 345666556668888877444433 45578999999997544 1 12221110 111
Q ss_pred EEEEEEeCcEEEEEEEeCCcc-eEEee---cCeeec--CCCcEEEEEEEEceEEEEEECCEEeEEEe
Q psy9685 136 YIAAEMEAGELFVRLQFNSTP-ESYNV---GGVKLA--DGNNHLIQVVRNVTLVQVKLNGTEYFRKT 196 (979)
Q Consensus 136 fi~l~L~~G~l~~~~~~g~~~-~~~~~---~~~~ln--Dg~WH~V~v~r~~~~~~L~VD~~~~~~~~ 196 (979)
=-.|.+.++.+.+.+.--+|. +.+.. ....+. -|+||.|+|+-+.+...+.|||.......
T Consensus 960 GW~Isi~~n~lIWtl~D~ng~~k~I~f~y~~~~nisdyiNkW~fVTItndlg~~~IYING~Li~~~~ 1026 (1290)
T 1epw_A 960 GWKISIRGNRIIWTLIDINGKTKSVFFEYNIREDISEYINRWFFVTITNNLNNAKIYINGKLESNTD 1026 (1290)
T ss_dssp EEEEEEETTEEEEEEECTTCCEEEEEEECCSSCSSCSSTTSCEEEEEEECSSEEEEEETTEEEEEEE
T ss_pred CcEEEECCCeEEEEEecCCCcceeEEEecccccchhhccCceEEEEEEecCCceEEEECCEEeechh
Confidence 245677899998888764442 22221 123333 39999999999999999999998765554
No 230
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=52.01 E-value=18 Score=27.80 Aligned_cols=7 Identities=14% Similarity=0.705 Sum_probs=2.5
Q ss_pred HHHHHHH
Q psy9685 932 LISMAVL 938 (979)
Q Consensus 932 l~~~~~~ 938 (979)
++.+.++
T Consensus 23 ~~glcI~ 29 (70)
T 2klu_A 23 FIGLGIF 29 (70)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3333333
No 231
>3s5q_A Putative glycosylhydrolase; concanavalin A-like lectins/glucanases, structural genomics, center for structural genomics, JCSG; 1.85A {Parabacteroides distasonis}
Probab=51.93 E-value=13 Score=37.00 Aligned_cols=29 Identities=14% Similarity=0.264 Sum_probs=25.6
Q ss_pred cCCCcEEEEEEEEceEEEEEECCEEeEEE
Q psy9685 167 ADGNNHLIQVVRNVTLVQVKLNGTEYFRK 195 (979)
Q Consensus 167 nDg~WH~V~v~r~~~~~~L~VD~~~~~~~ 195 (979)
..|+|.+.+|+-.+..+++.|+|..+...
T Consensus 131 p~GeWN~~~I~~~g~~i~v~lNG~~V~~~ 159 (214)
T 3s5q_A 131 KPGEWNRMIITAKGQQIDIELNGKHIVSA 159 (214)
T ss_dssp CTTSEEEEEEEEETTEEEEEETTEEEEEE
T ss_pred CCCccEEEEEEEECCEEEEEECCEEEEEE
Confidence 38999999999999999999999887543
No 232
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=51.59 E-value=5.5 Score=47.01 Aligned_cols=38 Identities=29% Similarity=0.712 Sum_probs=29.9
Q ss_pred cCcccccCCCCCCCCeeeccCC-CCeeecCCCCC----CCCCCCC
Q psy9685 824 DINECELSSDMCGNNGECINQP-GDYKCACQFDT----CGYLCNF 863 (979)
Q Consensus 824 ~~~~C~~~~~~C~~~g~C~~~~-gs~~C~C~~g~----~G~~C~~ 863 (979)
..++|...+..|++ .|.+.+ ++|+|.|+.|| .+..|..
T Consensus 264 ~~n~C~~~ng~C~~--~C~~~~~~~~~C~C~~g~~l~~d~~~C~~ 306 (628)
T 4a0p_A 264 GWNECASSNGHCSH--LCLAVPVGGFVCGCPAHYSLNADNRTCSA 306 (628)
T ss_dssp CCCTTTTTGGGCSS--EEEEETTTEEEEECSTTCEECTTSSCEEC
T ss_pred cceEeccCCCCcch--hhhcCCCCCeeEEcCCCcEecccCCcCcc
Confidence 46788766677876 899988 99999999999 3566753
No 233
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=51.31 E-value=7.5 Score=41.41 Aligned_cols=36 Identities=31% Similarity=0.720 Sum_probs=25.8
Q ss_pred cccccCCCCCCCCeeeccCCC--CeeecCCCCCC----CCCCCC
Q psy9685 826 NECELSSDMCGNNGECINQPG--DYKCACQFDTC----GYLCNF 863 (979)
Q Consensus 826 ~~C~~~~~~C~~~g~C~~~~g--s~~C~C~~g~~----G~~C~~ 863 (979)
++|...+..|++ .|...++ +|.|.|+.||. |..|.+
T Consensus 268 n~C~~~ng~Cs~--~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 268 NPCGIDNGGCSH--LCLMSPVKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp CTTTTTGGGCSS--EEEECSSTTSEEEECSTTCCBCTTSSCBCC
T ss_pred cccccCCCCcce--EEecCCCCCCeEEECCCCCEECCCCCCCCC
Confidence 456554567866 7988776 79999999984 555653
No 234
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=49.68 E-value=7.8 Score=41.15 Aligned_cols=31 Identities=29% Similarity=0.693 Sum_probs=22.4
Q ss_pred CcccccC---CCCCCCCeeeccCC------CCeeecCCCCCC
Q psy9685 825 INECELS---SDMCGNNGECINQP------GDYKCACQFDTC 857 (979)
Q Consensus 825 ~~~C~~~---~~~C~~~g~C~~~~------gs~~C~C~~g~~ 857 (979)
.++|... +..|++ .|.+.+ ++|.|.|+.||.
T Consensus 267 ~n~C~~~~~~ng~Cs~--~C~~~p~~~~~~~~~~C~C~~g~~ 306 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQY--LCLPAPQINPHSPKFTCACPDGML 306 (316)
T ss_dssp CCTTSSSSSGGGGCSS--EEEECCCCSTTCCSEEEECCTTCE
T ss_pred cccccccccCCCCcCc--ccCCCccccCCCCCeEeeCCCCCE
Confidence 4566543 456765 898765 689999999984
No 235
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=46.08 E-value=7.5 Score=27.13 Aligned_cols=10 Identities=30% Similarity=0.491 Sum_probs=3.9
Q ss_pred hhhhhHHHHH
Q psy9685 919 IIGPILAILL 928 (979)
Q Consensus 919 ~~~~~~~~ll 928 (979)
++++++++++
T Consensus 16 ~~~vv~Gv~l 25 (41)
T 2k9y_A 16 IGGVAVGVVL 25 (41)
T ss_dssp HHHHHHHHHH
T ss_pred EeehhHHHHH
Confidence 3334434333
No 236
>3h3l_A Putative sugar hydrolase; YP_001304206.1, structural genomic center for structural genomics, JCSG; HET: MSE; 1.59A {Parabacteroides distasonis atcc 8503}
Probab=46.01 E-value=23 Score=35.78 Aligned_cols=32 Identities=16% Similarity=0.061 Sum_probs=27.6
Q ss_pred ecCCCcEEEEEEEEceEEEEEECCEEeEEEec
Q psy9685 166 LADGNNHLIQVVRNVTLVQVKLNGTEYFRKTI 197 (979)
Q Consensus 166 lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~~ 197 (979)
...|+|.+.+|+-.+..+++.|+|..+.....
T Consensus 150 kp~GeWNt~~I~v~g~~v~v~lNG~~V~~~~~ 181 (241)
T 3h3l_A 150 KPYGNWNKTRIVVYNQRVIHYMNDVKILEFQF 181 (241)
T ss_dssp CCTTSCEEEEEEEETTEEEEEETTEEEEEEET
T ss_pred CCCCcceEEEEEEECCEEEEEECCEEEEEEEC
Confidence 44799999999999999999999998766553
No 237
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=44.47 E-value=30 Score=24.51 Aligned_cols=28 Identities=14% Similarity=0.059 Sum_probs=11.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhccccC
Q psy9685 923 ILAILLLGGLISMAVLCLMARQKRGRRG 950 (979)
Q Consensus 923 ~~~~lll~~l~~~~~~~~~~r~~r~~~~ 950 (979)
+++.++-+++++++.+.+....||++.+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHHHHHHHHHHHHHHHhheehhhhh
Confidence 3334443333333344444455544433
No 238
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=42.47 E-value=8.4 Score=45.35 Aligned_cols=31 Identities=26% Similarity=0.679 Sum_probs=25.5
Q ss_pred CcccccCCCCCCCCeeeccCCCCeeecCCCCCC
Q psy9685 825 INECELSSDMCGNNGECINQPGDYKCACQFDTC 857 (979)
Q Consensus 825 ~~~C~~~~~~C~~~g~C~~~~gs~~C~C~~g~~ 857 (979)
.++|...+..|.+ .|.+.++++.|.|+.||.
T Consensus 578 ~~~C~~~ng~C~~--~C~~~~~~~~C~C~~g~~ 608 (619)
T 3s94_A 578 SNPCAEENGGCSH--LCLYRPQGLRCACPIGFE 608 (619)
T ss_dssp CCGGGSGGGGCSS--EEEEETTEEEEECCTTCE
T ss_pred cccCCCCCCChhH--hhccCCCCeEEECCCCCE
Confidence 4677665667876 899999999999999984
No 239
>3ffz_A Botulinum neurotoxin type E; botulinum neurotoxin serotype E, botulism, domain organization, endopeptidase, translocation, hydrolase; 2.65A {Clostridium botulinum}
Probab=42.22 E-value=5e+02 Score=31.66 Aligned_cols=115 Identities=17% Similarity=0.162 Sum_probs=73.3
Q ss_pred ccccccccCCCeeEEEEeCcccc-ccceeeEEEEEEEEeCCCC----------eEEEEecCCCCCCCCCCCCCCCCCCCE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVAR-RAVRNIVDISMFIRTRQLR----------GAIFYLGGSGDRSSPSSNGAGSEETSY 136 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~-~~~~~~~~isl~FrT~~~~----------GlLly~~~~~~~~~~~~~~~~~~~~df 136 (979)
.-+|++.++..|-+.+......- ..+...|+|+|++|...-+ -||=-.+. ..-=
T Consensus 885 ~n~~~L~~~~~S~i~v~~~n~i~yN~l~~nFSIsFWiRipk~~~~~in~~nEytII~~~~~---------------nNsG 949 (1252)
T 3ffz_A 885 KNQFGIYNDKLSEVNISQNDYIIYDNKYKNFSISFWVRIPNYDNKIVNVNNEYTIINCMRD---------------NNSG 949 (1252)
T ss_dssp TTCEEEESSSCEEEEEECCTTTSCCSSCCCCEEEEEEECCCCCSTTTCCCCCEEEEEEEET---------------TTEE
T ss_pred ccceEeccCCCCceEEEcccceeecccccceeEEEEEEcCCcCccccccCCceeEEeeccC---------------CCCC
Confidence 55677755566787777643332 2567899999999985443 23322211 2233
Q ss_pred EEEEEeCcEEEEEEEeCCcce-EEeec---CeeecC--CCcEEEEEEEEc-eEEEEEECCEEeEEEec
Q psy9685 137 IAAEMEAGELFVRLQFNSTPE-SYNVG---GVKLAD--GNNHLIQVVRNV-TLVQVKLNGTEYFRKTI 197 (979)
Q Consensus 137 i~l~L~~G~l~~~~~~g~~~~-~~~~~---~~~lnD--g~WH~V~v~r~~-~~~~L~VD~~~~~~~~~ 197 (979)
-.+.|+++.+++.+.--.|.. .+..+ ...++| ++||.|+|+-+. +...+.|||.-......
T Consensus 950 WkI~l~~n~iiwtl~D~ngn~k~i~f~y~~~~~isdyiNkW~fITITnnRL~~~~IyINg~Li~~~~I 1017 (1252)
T 3ffz_A 950 WKVSLNHNEIIWTLQDNAGINQKLAFNYGNANGISDYINKWIFVTITNDRLGDSKLYINGNLIDQKSI 1017 (1252)
T ss_dssp EEEEEETTEEEEEEECSSSCEEEEEEECCCCSBCCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEEC
T ss_pred cEEEEecCeEEEEEEeCCCCeeeEEEecccccchhhhhcceEEEEEEeccCccceEEECCEEeeccch
Confidence 568889999999887655522 22211 112222 899999999986 56699999987766654
No 240
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=41.46 E-value=21 Score=25.36 Aligned_cols=14 Identities=14% Similarity=0.050 Sum_probs=5.9
Q ss_pred HHHHHHHhhhhhcc
Q psy9685 934 SMAVLCLMARQKRG 947 (979)
Q Consensus 934 ~~~~~~~~~r~~r~ 947 (979)
+++...++...||+
T Consensus 25 ~ii~~~~~~~~RRr 38 (44)
T 2ks1_B 25 LVVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhhh
Confidence 33444444444444
No 241
>2kv9_B Integrin beta-3; platelet glycoprotein IIIA, GPIIIA, C adhesion; NMR {Homo sapiens}
Probab=40.56 E-value=1.4 Score=35.14 Aligned_cols=31 Identities=10% Similarity=0.141 Sum_probs=19.5
Q ss_pred HHHHHHHHhhhhhccccCCCCCCCccccCCceee
Q psy9685 933 ISMAVLCLMARQKRGRRGTYSPSSQEYCNPRVEM 966 (979)
Q Consensus 933 ~~~~~~~~~~r~~r~~~~~~~~~~~e~~~~~~~~ 966 (979)
++++|+++...++|+ +|..++.|..++++++
T Consensus 24 ~LliwKll~~i~DrR---EyaKFEkEr~~akw~~ 54 (75)
T 2kv9_B 24 ECLIWKLLITIHDRK---EFAKFEEERARAKWDT 54 (75)
T ss_dssp HHHHHHHHHHHHHCH---HHHHHHHHHHHGGGSS
T ss_pred HHHHHHHHHhhHHHH---HHHHHHHHHHHhcccc
Confidence 344566666666666 5666677766666654
No 242
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=39.81 E-value=36 Score=24.03 Aligned_cols=32 Identities=13% Similarity=-0.017 Sum_probs=15.8
Q ss_pred hhhHHHHH-HHHHHHHHHHHHhhhhhccccCCC
Q psy9685 921 GPILAILL-LGGLISMAVLCLMARQKRGRRGTY 952 (979)
Q Consensus 921 ~~~~~~ll-l~~l~~~~~~~~~~r~~r~~~~~~ 952 (979)
.++++++. ++++.++++++++..-..+++++|
T Consensus 11 ~Iv~gvi~~ivliGl~lLliwk~~~~i~DrrEy 43 (43)
T 2k9j_B 11 VVLLSVMGAILLIGLAALLIWKLLITIHDRKEF 43 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHHheehhhcC
Confidence 33333333 333344455555556566666654
No 243
>1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17
Probab=39.80 E-value=1.2e+02 Score=29.70 Aligned_cols=101 Identities=9% Similarity=0.043 Sum_probs=58.4
Q ss_pred ceeeEEEEEEEEeCCCCeE--EEEecCCCCCCCCCC----CCCCCCCCCE-----EEEEEeCcE-----------EEEEE
Q psy9685 93 VRNIVDISMFIRTRQLRGA--IFYLGGSGDRSSPSS----NGAGSEETSY-----IAAEMEAGE-----------LFVRL 150 (979)
Q Consensus 93 ~~~~~~isl~FrT~~~~Gl--Lly~~~~~~~~~~~~----~~~~~~~~df-----i~l~L~~G~-----------l~~~~ 150 (979)
+.....|+.+|+....-|+ +|+++.+ ..+..+- ..+.+.-.+| -++.+.=|. -.|+-
T Consensus 59 f~g~~~I~~~f~pv~e~Gl~n~Fw~A~d-~~g~dlF~~~~~~R~G~y~~Y~s~dl~~~yvsYf~~~~~ner~f~TtrlRk 137 (223)
T 1oq1_A 59 FPDGIIVTWDFSPIEQPGLCMLFFAAAG-IRGEDLFDPSLRKRTGTYPEYHSGDINALHLSYFRRKYAEERAFRTCNLRK 137 (223)
T ss_dssp BCSSEEEEEEEEEEECSEEEEEEEEEEE-TTSCCTTCTTSCCCCSCTHHHHSSSEEEEEEEEEEESSHHHHTSCEEEEEE
T ss_pred CCCCEEEEEEEEEccCCCceEEEEeccC-CCcccccccCCCccCcccccccccchhheEEeccccccccccccccccccc
Confidence 3366899999999988886 6666532 1121111 1122222222 223333222 23333
Q ss_pred EeCCcceEEee-c---CeeecCCCcEEEEEEEEceEEEEEECCEEeEEEe
Q psy9685 151 QFNSTPESYNV-G---GVKLADGNNHLIQVVRNVTLVQVKLNGTEYFRKT 196 (979)
Q Consensus 151 ~~g~~~~~~~~-~---~~~lnDg~WH~V~v~r~~~~~~L~VD~~~~~~~~ 196 (979)
-.|. .++.. . +...+.++|++|+|..++..++..|||..+..-+
T Consensus 138 y~G~--~Lv~~~adPLp~~~dan~~Y~i~i~kd~~~v~f~vNg~~lF~~~ 185 (223)
T 1oq1_A 138 SRGF--HLAAMGADPLPSPDDADSPYRMKLIKDKGYVHFSINGLPILEWM 185 (223)
T ss_dssp ETTT--EEEEEEECCCCCGGGCCSCEEEEEEEETTEEEEEETTEEEEEEE
T ss_pred cCCc--cchhhccCCCCcccCCCCcEEEEEEEeCCEEEEEECCEEEEEee
Confidence 3332 22222 1 1225778999999999999999999999876654
No 244
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=37.36 E-value=8 Score=41.71 Aligned_cols=27 Identities=33% Similarity=0.781 Sum_probs=22.2
Q ss_pred CCCCCceEecCCCCeEEecCCCCcCCCCccc
Q psy9685 730 PCKNSGQCIDDVNAFICNCTNTATGASMGCL 760 (979)
Q Consensus 730 ~C~~~g~C~~~~g~~~C~C~~g~~g~~~~c~ 760 (979)
.|+++|.|.+. +|.|++||.|.+..|.
T Consensus 197 ~CsGhG~C~~g----~C~Cd~G~~g~d~~C~ 223 (387)
T 2ddu_A 197 YCSGHGDCISG----VCFCDLGYTAAQGTCV 223 (387)
T ss_dssp GGGGSEEEETT----EEEECTTEEEETTEEE
T ss_pred ccCCCceecCC----eEEecCCcccCCCccc
Confidence 48999999773 8999999999775554
No 245
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=36.67 E-value=64 Score=37.62 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=35.6
Q ss_pred eecCCCcEEEEEEEEceEEEEEECCEEeE-EE--ecCcccccccceeEEcCCC
Q psy9685 165 KLADGNNHLIQVVRNVTLVQVKLNGTEYF-RK--TISSTGILDVQVLYLGGIP 214 (979)
Q Consensus 165 ~lnDg~WH~V~v~r~~~~~~L~VD~~~~~-~~--~~~~~~~l~~~~lyvGG~p 214 (979)
...-++=|+|.|...+.++.++|||+.+. .. .........+.++||||--
T Consensus 552 ~we~~~~~qv~l~l~~~~~s~yvdg~~~~~~~~~~~~~~~~~~ishfy~g~~~ 604 (648)
T 1ms9_A 552 SWEMGKRYHVVLTMANKIGSVYIDGEPLEGSGQTVVPDERTPDISHFYVGGYK 604 (648)
T ss_dssp CCCTTCEEEEEEEEETTEEEEEETTEECTTCCEECSCSSCCCCCCEEEESSCS
T ss_pred cccCCcceEEEEEEeCCcEEEEECCEEecCCcccccccCCCcccceEEEcCCC
Confidence 45556779999888777999999998762 11 2233445566799999954
No 246
>2vu9_A Botulinum neurotoxin A heavy chain; hydrolase, metalloprotease, ganglioside, metal-B toxin, protease, membrane, receptor, secreted; HET: BGC GAL SIA NGA; 1.6A {Clostridium botulinum} PDB: 2vua_A 3fuo_A
Probab=35.45 E-value=4.4e+02 Score=28.21 Aligned_cols=114 Identities=16% Similarity=0.148 Sum_probs=71.3
Q ss_pred ccccccccCCCeeEEEEeCcccc-ccceeeEEEEEEEEeCCCCe---------EEEEecCCCCCCCCCCCCCCCCCCCEE
Q psy9685 68 AATFGHENTTNSLVTVAVGGVAR-RAVRNIVDISMFIRTRQLRG---------AIFYLGGSGDRSSPSSNGAGSEETSYI 137 (979)
Q Consensus 68 a~~Fg~~~~~~s~~~~~~~~~~~-~~~~~~~~isl~FrT~~~~G---------lLly~~~~~~~~~~~~~~~~~~~~dfi 137 (979)
.-+|++.++..|.+.+......- ..+...|+|+|.+|...-+- ||=-.. ..-=-
T Consensus 58 ~n~~~L~~~~~S~i~V~~~n~i~yN~m~~nFSIsFWiRipk~~~~~~~~neytII~~~~----------------nNsGW 121 (444)
T 2vu9_A 58 KNQIQLFNLESSKIEVILKNAIVYNSMYENFSTSFWIRIPKYFNSISLNNEYTIINCME----------------NNSGW 121 (444)
T ss_dssp TTCEEEESSTTCCEEEECCGGGSCEESSCCEEEEEEEECCCCCSGGGTTCCEEEEEEEE----------------TTEEE
T ss_pred CceeEEccCCCCceEEEcccceeecccccceEEEEEEecCCcccccccCcceEEEEecc----------------CCCCc
Confidence 45676654556888888633332 25668999999999742211 221111 11234
Q ss_pred EEEEeCcEEEEEEEeCCcceE-Eeec---CeeecC--CCcEEEEEEEEc-eEEEEEECCEEeEEEec
Q psy9685 138 AAEMEAGELFVRLQFNSTPES-YNVG---GVKLAD--GNNHLIQVVRNV-TLVQVKLNGTEYFRKTI 197 (979)
Q Consensus 138 ~l~L~~G~l~~~~~~g~~~~~-~~~~---~~~lnD--g~WH~V~v~r~~-~~~~L~VD~~~~~~~~~ 197 (979)
.+.|.+..+++.+.--.|... +..+ ...++| ++||.|+|+-+. +...+.|||.-......
T Consensus 122 kIsl~~n~iiwtL~D~ngn~k~i~f~Y~~~~~isdyiNkW~fITITndRL~n~~IyINg~Li~~~~I 188 (444)
T 2vu9_A 122 KVSLNYGEIIWTLQDTQEIKQRVVFKYSQMINISDYINRWIFVTITNNRLNNSKIYINGRLIDQKPI 188 (444)
T ss_dssp EEEEETTEEEEEEECTTSCEEEEEEECCSBSSSCSSTTSCEEEEEEECTTSEEEEEETTEEEEEEEC
T ss_pred EEEEecCcEEEEEEeCCCCeeEEEEeeccccchhhhhcceEEEEEEcccccceeEEECCEEeeccch
Confidence 678899999998876555222 2211 122222 899999999985 56699999987666543
No 247
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=34.27 E-value=27 Score=39.25 Aligned_cols=32 Identities=19% Similarity=0.501 Sum_probs=27.0
Q ss_pred CCCCCCceEecC-CCCeEEecCCCCcCCCCccc
Q psy9685 729 GPCKNSGQCIDD-VNAFICNCTNTATGASMGCL 760 (979)
Q Consensus 729 ~~C~~~g~C~~~-~g~~~C~C~~g~~g~~~~c~ 760 (979)
++|..++.|+.. .+.|.|.|+.||.|.+-.|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 579999999875 56789999999999887763
No 248
>3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A*
Probab=33.87 E-value=1.9e+02 Score=33.86 Aligned_cols=55 Identities=11% Similarity=-0.054 Sum_probs=38.8
Q ss_pred eEEEEE-ecCEEEEEEEcCCcCceeeecCeeecCCCeeEEEEEeecceeeeEEEEEccCC
Q psy9685 333 YIAAEM-EAGELFVRLQFNSTPESYNVGGVKLADGNNHLIQTISSTGILDVQVLYLGGIP 391 (979)
Q Consensus 333 ~l~l~l-~~G~l~~~~~~g~~~~~~~~~~~~l~DG~wH~V~~~~~~~~l~l~vlyvGG~p 391 (979)
++.+.| .+|.+++.-++++ ..++......+.-++||++++..+++.|. .||+|.+
T Consensus 565 gy~~~i~~~G~~~l~~~~~~-~~vLa~g~~~~~~~~w~~L~l~~~G~~i~---~~ldG~~ 620 (656)
T 3zr5_A 565 GVFFWIFANGSYRVTADLGG-WITYASGHADVTAKRWYTLTLGIKGYFAF---GMLNGTI 620 (656)
T ss_dssp EEEEEEETTTEEEEEEETTC-CSEEEEEECSCCTTCEEEEEEEEETTEEE---EEETTEE
T ss_pred eEEEEEEcCCEEEEEEecCC-eEEEEEEEecCCCCceEEEEEEEECCEEE---EEECCEE
Confidence 344444 5999999877755 44344445589999999999999998753 5666643
No 249
>3vuo_A NTNHA; protection of botulinum neurotoxin, botulinum neurotoxin, to; 3.90A {Clostridium botulinum}
Probab=33.01 E-value=2.4e+02 Score=34.54 Aligned_cols=90 Identities=10% Similarity=0.060 Sum_probs=59.5
Q ss_pred cceeeEEEEEEEEeCCC--CeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEeCcEEEEEEEeCCcceE-EeecCeeecC
Q psy9685 92 AVRNIVDISMFIRTRQL--RGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPES-YNVGGVKLAD 168 (979)
Q Consensus 92 ~~~~~~~isl~FrT~~~--~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~~G~l~~~~~~g~~~~~-~~~~~~~lnD 168 (979)
.+...|+|||++|.... +..-+...- ...-=-.+.|+++.+.+.+.--.|... +..+ ..+ .
T Consensus 896 smy~nFSISFWiRi~k~~~~~~~iI~~~--------------~nNSGWkIsl~~n~IIwtLqD~ngn~k~i~fs-~~i-~ 959 (1196)
T 3vuo_A 896 GLTNNFTICFWLRFTGKDDDKTRLIGNK--------------VNNCGWEIYFEDNGLVFEIIDSNGNQESVYLS-NVI-N 959 (1196)
T ss_dssp CSSCCEEEEEEEEECCCCSSCEEEEEEE--------------CSSCEEEEEEETTEEEEEEECTTCCEEEEEEC-SCT-T
T ss_pred ccccceeEEEEEEccCCCCCceeEeeec--------------ccCCCcEEEEeCCcEEEEEEecCCceeeEEEe-Eee-c
Confidence 45588999999997642 233233210 022345678899999998877666332 2223 223 3
Q ss_pred CCcEEEEEEEEc--eEEEEEECCEEeEEEec
Q psy9685 169 GNNHLIQVVRNV--TLVQVKLNGTEYFRKTI 197 (979)
Q Consensus 169 g~WH~V~v~r~~--~~~~L~VD~~~~~~~~~ 197 (979)
++||-|+|+-+. ....+.|+|.-......
T Consensus 960 NkW~FVTITnnRL~~s~~IYING~Li~~~~I 990 (1196)
T 3vuo_A 960 NNWYYISISVDRLKDQLLIFINDKNVANVSI 990 (1196)
T ss_dssp SCCEEEEEEEETTTTEEEEEETTEEEEEEEC
T ss_pred ceEEEEEEEecccCceeEEEECCEEecchhh
Confidence 899999999875 67799999987766543
No 250
>4azz_A Levanase; hydrolase; 1.70A {Bacillus subtilis}
Probab=38.66 E-value=9.4 Score=36.38 Aligned_cols=31 Identities=10% Similarity=0.051 Sum_probs=22.6
Q ss_pred cCeeecCCCeeEEEEEeecceeeeEEEEEccCCC
Q psy9685 359 GGVKLADGNNHLIQTISSTGILDVQVLYLGGIPE 392 (979)
Q Consensus 359 ~~~~l~DG~wH~V~~~~~~~~l~l~vlyvGG~p~ 392 (979)
....+..|+||+|++...+..|. +||.|.+.
T Consensus 103 ~~~~~~~g~w~~l~I~~~G~~i~---~~vnG~~v 133 (172)
T 4azz_A 103 YKTPIDVNKKYHLKTEAEGDRFK---IYLDDRLV 133 (172)
Confidence 34567889999999998887644 56666543
No 251
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=31.41 E-value=28 Score=24.69 Aligned_cols=21 Identities=10% Similarity=-0.021 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHhhhhhccccC
Q psy9685 930 GGLISMAVLCLMARQKRGRRG 950 (979)
Q Consensus 930 ~~l~~~~~~~~~~r~~r~~~~ 950 (979)
+++++++...++...||++++
T Consensus 20 v~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHHHhhhhhhh
Confidence 344445555555566655444
No 252
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=30.24 E-value=38 Score=23.43 Aligned_cols=13 Identities=0% Similarity=-0.560 Sum_probs=5.1
Q ss_pred hhhhhHHHHHHHH
Q psy9685 919 IIGPILAILLLGG 931 (979)
Q Consensus 919 ~~~~~~~~lll~~ 931 (979)
.++++.++.-+++
T Consensus 13 ~~I~~~vv~Gv~l 25 (41)
T 2k9y_A 13 LAVIGGVAVGVVL 25 (41)
T ss_dssp THHHHHHHHHHHH
T ss_pred EEEEeehhHHHHH
Confidence 3433344333333
No 253
>2bqp_A Protein (PEA lectin); D-glucopyranose complex, sugar binding protein; HET: GLC; 1.90A {Pisum sativum} SCOP: b.29.1.1
Probab=29.78 E-value=4.2e+02 Score=26.21 Aligned_cols=90 Identities=20% Similarity=0.304 Sum_probs=49.3
Q ss_pred eEEEEEEEEe--C----CCCeEEEEecCCCCCCCCCCCC---------CCCCCCCEEEEEEe---Cc-------EEEEEE
Q psy9685 96 IVDISMFIRT--R----QLRGAIFYLGGSGDRSSPSSNG---------AGSEETSYIAAEME---AG-------ELFVRL 150 (979)
Q Consensus 96 ~~~isl~FrT--~----~~~GlLly~~~~~~~~~~~~~~---------~~~~~~dfi~l~L~---~G-------~l~~~~ 150 (979)
.|+.+|.|+- . ..+||=|+....... |.... .......++|||+. +- .=++-+
T Consensus 62 sFst~F~F~I~~~~~~~~gdGlAF~l~p~~~~--p~~~g~~LGl~n~~~~~~~~~~vAVEFDT~~N~~~Dp~~~~nHVgI 139 (234)
T 2bqp_A 62 NFVTSFTFVINAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNSAEYDKTTQTVAVEFDTFYNAAWDPSNRDRHIGI 139 (234)
T ss_dssp EEEEEEEEEEECSSTTSCCCEEEEEEEETTCC--CCCCGGGTTTCSCSSCCGGGCCEEEEEECSCCTTTSCTTCCCEEEE
T ss_pred eEEEEEEEEEeCCCCCCCCCcEEEEEecCCCC--CCCCCCccccccccCCCCCCcEEEEEEecccCcccCCCCCCCceeE
Confidence 5666666653 2 368997766532211 21000 00112457899874 10 235566
Q ss_pred EeCCcceEEeecCeeecCCCcEEEEEEEEc--eEEEEEEC
Q psy9685 151 QFNSTPESYNVGGVKLADGNNHLIQVVRNV--TLVQVKLN 188 (979)
Q Consensus 151 ~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~--~~~~L~VD 188 (979)
+.++-. .+......+.+|++|+|.|..+. +.+.+.++
T Consensus 140 dvns~~-S~~s~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~ 178 (234)
T 2bqp_A 140 DVNSIK-SVNTKSWKLQNGEEANVVIAFNAATNVLTVSLT 178 (234)
T ss_dssp EESSSS-CSEEEECCCCTTCEEEEEEEEETTTTEEEEEEE
T ss_pred eeCCcc-ccceEeeEEcCCCEEEEEEEEeCCCCEEEEEEe
Confidence 665431 11222235789999999999998 45666654
No 254
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=28.67 E-value=27 Score=39.31 Aligned_cols=37 Identities=27% Similarity=0.719 Sum_probs=27.8
Q ss_pred cccccCC-CCCCCCeeeccC-CCCeeecCCCCCCC--CCCC
Q psy9685 826 NECELSS-DMCGNNGECINQ-PGDYKCACQFDTCG--YLCN 862 (979)
Q Consensus 826 ~~C~~~~-~~C~~~g~C~~~-~gs~~C~C~~g~~G--~~C~ 862 (979)
+.|.... +.|..++.|+.. .+.|.|.|+.||.| ..|.
T Consensus 19 ~~c~~~~~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 19 RFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CBCTTSSBCCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred ccCCCCCCCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 4465433 689999999865 57889999999964 4664
No 255
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=28.29 E-value=9.3 Score=41.17 Aligned_cols=26 Identities=27% Similarity=0.821 Sum_probs=21.7
Q ss_pred CCCCCCeeeccCCCCeeecCCCCCCCCC--CC
Q psy9685 833 DMCGNNGECINQPGDYKCACQFDTCGYL--CN 862 (979)
Q Consensus 833 ~~C~~~g~C~~~~gs~~C~C~~g~~G~~--C~ 862 (979)
..|.++|.|++. +|.|.+||.|.. |.
T Consensus 196 ~~CsGhG~C~~g----~C~Cd~G~~g~d~~C~ 223 (387)
T 2ddu_A 196 SYCSGHGDCISG----VCFCDLGYTAAQGTCV 223 (387)
T ss_dssp GGGGGSEEEETT----EEEECTTEEEETTEEE
T ss_pred cccCCCceecCC----eEEecCCcccCCCccc
Confidence 468999999763 999999999874 64
No 256
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=27.89 E-value=39 Score=26.01 Aligned_cols=18 Identities=28% Similarity=0.562 Sum_probs=9.5
Q ss_pred hhhhhhHHHHHHHHHHHH
Q psy9685 918 LIIGPILAILLLGGLISM 935 (979)
Q Consensus 918 ~~~~~~~~~lll~~l~~~ 935 (979)
++++.+++++++..+.++
T Consensus 12 ivlGg~~~lll~~glcI~ 29 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIF 29 (70)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHH
Confidence 355555555555555554
No 257
>3gne_A Val-1; alginate lyase, polysaccharide lyase family 14, chlorella VI lyase; HET: FLC; 1.20A {Chlorella virus} PDB: 3a0n_A* 3im0_A*
Probab=27.59 E-value=85 Score=31.56 Aligned_cols=50 Identities=20% Similarity=0.156 Sum_probs=32.0
Q ss_pred eecCCCcEEEEEEEEce-----------EEEEEECCEEeEEEec-----Ccccccccc-eeEEcCCC
Q psy9685 165 KLADGNNHLIQVVRNVT-----------LVQVKLNGTEYFRKTI-----SSTGILDVQ-VLYLGGIP 214 (979)
Q Consensus 165 ~lnDg~WH~V~v~r~~~-----------~~~L~VD~~~~~~~~~-----~~~~~l~~~-~lyvGG~p 214 (979)
.+..|+||+|++.-.-+ .++|.|||..+..... ....+..+. ..|.||--
T Consensus 159 ~f~~G~W~~V~q~VkLNT~~~G~g~aDG~v~v~VNG~~v~~~~i~~r~~~~~~I~gi~fsTFFGGs~ 225 (252)
T 3gne_A 159 ALKYDVWNRIEIGTKMNTFKNGIPQLDGESYVIVNGKKEVLKRINWSRSPDLLISRFDWNTFFGGPL 225 (252)
T ss_dssp CSCBTSCEEEEEEEECCCEETTEECSCEEEEEEETTEEEEEEEECCCSSTTCCEEEEEEEEEECSSC
T ss_pred eEcCCceEEEEEEEEcCCCCCCCccCCceEEEEECCEEEEECCEEEEecCCccEeEEEEEEEcCCCC
Confidence 68899999999876643 4499999987743211 112222233 67778854
No 258
>3v0a_B NTNH; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Clostridium botulinum} PDB: 3v0b_B
Probab=26.99 E-value=3.6e+02 Score=32.15 Aligned_cols=83 Identities=8% Similarity=0.069 Sum_probs=47.6
Q ss_pred cceeEEEEEEEeccCC---eEEEEecCCCCCCCCCCCCCCCCccceEEEEEecCEEEEEEEcCCcCce-eeecCeeecCC
Q psy9685 291 RNIVDISMFIRTRQLR---GAIFYLGGSGDRSSPSSNGAGSEETSYIAAEMEAGELFVRLQFNSTPES-YNVGGVKLADG 366 (979)
Q Consensus 291 ~~~~~is~~frT~~~~---GlLl~~g~~~~~~~~~~~~~~~~~~d~l~l~l~~G~l~~~~~~g~~~~~-~~~~~~~l~DG 366 (979)
..+++|+|++|...-+ -.|+-.-. .+.+ =.+.+.++.|...+....|... +..+ .+.+|
T Consensus 901 tnnFSISFWVRipk~~~~eyTIIg~~~-------------nNsG--W~ISf~~n~LIWtl~DsnGn~knI~f~--dy~~N 963 (1196)
T 3v0a_B 901 TNSFSIYFWLRNLGKDTIKSKLIGSKE-------------DNCG--WEIYFQDTGLVFNMIDSNGNEKNIYLS--DVSNN 963 (1196)
T ss_dssp SCCEEEEEEEEECCCCCSCEEEEEEEE-------------TTEE--EEEEEETTEEEEEEECTTCCEEEEEEC--SCCSS
T ss_pred ccceEEEEEEEcCCcCCccceEEEeec-------------CCCC--cEEEECCCeEEEEEEcCCCcccceEec--cccCC
Confidence 4568899999974432 22321110 0122 3445578888888765544432 2222 57899
Q ss_pred CeeEEEEEeecceeeeEEEEEccCC
Q psy9685 367 NNHLIQTISSTGILDVQVLYLGGIP 391 (979)
Q Consensus 367 ~wH~V~~~~~~~~l~l~vlyvGG~p 391 (979)
+||.|+++..+-.-.| .+||-|.-
T Consensus 964 kWyfITISvDRLGnal-kIYINGkL 987 (1196)
T 3v0a_B 964 SWHYITISVDRLKEQL-LIFIDDNL 987 (1196)
T ss_dssp SCEEEEEEEETTTTEE-EEEETTEE
T ss_pred cEEEEEEEEcCCCcee-EEEECCEE
Confidence 9999998776322111 47887743
No 259
>3zyp_A CIP1; metal binding protein, calcium-binding, CBM-containing, beta sandwich jelly roll, carbohydrate-binding; HET: NAG; 1.50A {Hypocrea jecorina}
Probab=26.30 E-value=2e+02 Score=28.07 Aligned_cols=56 Identities=14% Similarity=0.083 Sum_probs=32.8
Q ss_pred CEEEEEEeCcEEEEEEEeCCcceEEe-------ecCeeecCCCcEEEEEEEEc-eEEEEEECCEEe
Q psy9685 135 SYIAAEMEAGELFVRLQFNSTPESYN-------VGGVKLADGNNHLIQVVRNV-TLVQVKLNGTEY 192 (979)
Q Consensus 135 dfi~l~L~~G~l~~~~~~g~~~~~~~-------~~~~~lnDg~WH~V~v~r~~-~~~~L~VD~~~~ 192 (979)
.-+.+.-..+.+.+.+ +..+.... ....+|..|+||.|++.-+. ..+++.|||..+
T Consensus 97 ~~~r~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~s~~l~~g~W~cvE~~~~~~G~~~~W~DG~~v 160 (218)
T 3zyp_A 97 KHLRIGGQSQVLDYNR--ESDDATLPDLSPNGIASTVTLPTGAFQCFEYHLGTDGTIETWLNGSLI 160 (218)
T ss_dssp CEEEEEEETTEEEEEE--TTTCCEESCSSHHHHHHSCCCCCSSCEEEEEEECSSSCEEEEETTEEC
T ss_pred ceEEeecccceeeEEE--cCCccccCcccccccccceeecCCcEEEEEEEECCCCeEEEEECCEEe
Confidence 3445555666664443 33322221 12346899999999986644 456777777655
No 260
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=26.30 E-value=30 Score=38.50 Aligned_cols=25 Identities=36% Similarity=0.926 Sum_probs=13.4
Q ss_pred CCC-CCCEEeeCCCCcEEecCCCcccCccc
Q psy9685 647 PCM-NGGQCEDRLAGFVCNCSEEYVGERCE 675 (979)
Q Consensus 647 ~C~-~~g~C~~~~~~~~C~C~~G~~G~~C~ 675 (979)
.|. .+|..... .|.|.+||.|+.|+
T Consensus 447 ~C~~g~G~~~CG----~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFECG----VCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEETT----EEEECTTC------
T ss_pred ccCCCCeeEeCC----ceECcCCCCCCCCC
Confidence 465 56666555 78889999888885
No 261
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=24.40 E-value=1.2e+02 Score=26.79 Aligned_cols=55 Identities=20% Similarity=0.314 Sum_probs=43.1
Q ss_pred CEEEEEE-eCcEEEEEEEeCCc----ceEEeecCeeecCCCcEEEEEEEEceEEEEEECC
Q psy9685 135 SYIAAEM-EAGELFVRLQFNST----PESYNVGGVKLADGNNHLIQVVRNVTLVQVKLNG 189 (979)
Q Consensus 135 dfi~l~L-~~G~l~~~~~~g~~----~~~~~~~~~~lnDg~WH~V~v~r~~~~~~L~VD~ 189 (979)
.=++++| .+|+|+|-+....- ...++....-+.+|.-|++.+.|+...+.|.+|.
T Consensus 43 sel~vEiLEkG~VRfWlQaeklS~~a~~~~ifNdkei~~~~~~ki~fD~~tGiIEmime~ 102 (142)
T 2jtd_A 43 SELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEK 102 (142)
T ss_dssp CEEEEEEETTTEEEEEEECSCCTTCCEEEEEETTEECCSSSSCCEEECSSSCCEEEEECC
T ss_pred hhhhHHHHhcCcEEEEEEhhhcCCCceEEEEeccceeccCCCeeEeecccCChhhhhHhh
Confidence 3477776 68999998876522 2333447788999999999999999999999995
No 262
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=24.38 E-value=37 Score=37.81 Aligned_cols=14 Identities=57% Similarity=1.561 Sum_probs=7.5
Q ss_pred eecCCCCCCCCCcc
Q psy9685 707 ICDCPPGYRGSRCE 720 (979)
Q Consensus 707 ~C~C~~G~~G~~C~ 720 (979)
.|.|.+||.|..|+
T Consensus 459 ~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 459 VCRCGPGWLGSQCE 472 (472)
T ss_dssp EEEECTTC------
T ss_pred ceECcCCCCCCCCC
Confidence 79999999999985
No 263
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=22.73 E-value=87 Score=25.37 Aligned_cols=28 Identities=29% Similarity=0.337 Sum_probs=12.8
Q ss_pred cccchhhhhhhHHHHHHHHHHHHHHHHH
Q psy9685 913 VDLALLIIGPILAILLLGGLISMAVLCL 940 (979)
Q Consensus 913 ~~~~~~~~~~~~~~lll~~l~~~~~~~~ 940 (979)
..+...+++.++++.|+++++.-++..+
T Consensus 11 ~~Iv~gvi~gilliGllllliwk~~~~i 38 (79)
T 2knc_B 11 LVVLLSVMGAILLIGLAALLIWKLLITI 38 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344344554554444445554444433
No 264
>1dhk_B Bean lectin-like inhibitor, porcine pancreatic alpha-amylase; CO (hydrolase-inhibitor), complex (hydrolase-inhibitor) comple; HET: NAG; 1.85A {Phaseolus vulgaris} SCOP: b.29.1.1 PDB: 1viw_B*
Probab=22.36 E-value=2.1e+02 Score=28.20 Aligned_cols=79 Identities=18% Similarity=0.242 Sum_probs=44.4
Q ss_pred eEEEEEEEEe------CCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEEEEe--CcEEEEEEEeCCcceEEee-cCeee
Q psy9685 96 IVDISMFIRT------RQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAAEME--AGELFVRLQFNSTPESYNV-GGVKL 166 (979)
Q Consensus 96 ~~~isl~FrT------~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l~L~--~G~l~~~~~~g~~~~~~~~-~~~~l 166 (979)
.|+.+|.|+- ...+||=|+..... . .....++|||+. +-++ -+|..+- .+... -...+
T Consensus 61 SFsT~F~F~I~~~~~~~~gdGlAF~l~p~~-------~---~p~~~~vAVEFDT~~nHV--GIdvNsi-S~~~~~~~~~l 127 (223)
T 1dhk_B 61 SFDTNFTMNIRTHRQANSAVGLDFVLVPVQ-------P---ESKGDTVTVEFDTFLSRI--SIDVNNN-DIKSVPWDVHD 127 (223)
T ss_dssp EEEEEEEEEEECCC---CCSEEEEEEEEC----------------CCEEEEEETTTTEE--EEEETTE-EEEEEECCGGG
T ss_pred ceEEEEEEEEeCCCCCCCCCceEEEEecCC-------C---CCCccEEEEEecCCCCcc--cccCCcc-ccccccCCccc
Confidence 4555555542 23689988876311 1 012348999986 4554 5555543 11111 22345
Q ss_pred cCCCcEEEEEEEEce--EEEEEE
Q psy9685 167 ADGNNHLIQVVRNVT--LVQVKL 187 (979)
Q Consensus 167 nDg~WH~V~v~r~~~--~~~L~V 187 (979)
.+|+.++|.|..++. .+.+.+
T Consensus 128 ~~g~~~~v~I~Yd~~~~~L~V~l 150 (223)
T 1dhk_B 128 YDGQNAEVRITYNSSTKVFSVSL 150 (223)
T ss_dssp TTTSCEEEEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEEEEeCCCCEEEEEE
Confidence 589999999999984 455544
No 265
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=21.81 E-value=1.5e+02 Score=21.92 Aligned_cols=14 Identities=0% Similarity=-0.213 Sum_probs=5.9
Q ss_pred HHHHHHHhhhhhcc
Q psy9685 934 SMAVLCLMARQKRG 947 (979)
Q Consensus 934 ~~~~~~~~~r~~r~ 947 (979)
++++.+++.-..+|
T Consensus 25 Lii~~LwK~GFFKR 38 (54)
T 2l8s_A 25 LLILALWKIGFFKR 38 (54)
T ss_dssp HHHHHHHHHHHTTS
T ss_pred HHHHHHHHcCcccC
Confidence 33344444444444
No 266
>2ltn_A PEA lectin, alpha chain; 1.70A {Pisum sativum} SCOP: b.29.1.1 PDB: 1bqp_A* 1hkd_A 1ofs_A* 1rin_A* 1lof_C* 1len_A 1lem_A 1les_A* 2lal_A 1loe_A 1loa_A* 1loc_A* 1lod_A* 1lob_A 1lof_A* 1log_A* 1lgc_A* 1lgb_A* 2b7y_A*
Probab=21.44 E-value=3.3e+02 Score=25.79 Aligned_cols=47 Identities=21% Similarity=0.321 Sum_probs=30.7
Q ss_pred CCEEEEEEe---Cc-------EEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEce
Q psy9685 134 TSYIAAEME---AG-------ELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVT 181 (979)
Q Consensus 134 ~dfi~l~L~---~G-------~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~ 181 (979)
..++|||+. +. .=++-+|..+-.. +......+.+|++|+|.|..+..
T Consensus 113 n~~vAVEFDT~~n~~~Dp~~~~nHVGIdvNs~~S-~~t~~~~l~~G~~~~v~I~Yd~~ 169 (181)
T 2ltn_A 113 TQTVAVEFDTFYNAAWDPSNRDRHIGIDVNSIKS-VNTKSWKLQNGEEANVVIAFNAA 169 (181)
T ss_dssp SCCEEEEEECSCCTTTSCTTCCCEEEEEESSSSC-SEEEECCCCTTCCEEEEEEEETT
T ss_pred ccEEEEEeccccccccCCCCCCCEEEEEcCCccc-cceeccccCCCCEEEEEEEEECC
Confidence 468999974 21 2366777665421 12222357899999999999984
No 267
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=21.41 E-value=1.3e+02 Score=36.10 Aligned_cols=83 Identities=11% Similarity=0.066 Sum_probs=53.3
Q ss_pred eeeEEEEEEEEeCCCCeEEEEecCCCCCCCCCCCCCCCCCCCEEEE-EEe-CcEEEEEEEeCCcceEEeecCeeecCCCc
Q psy9685 94 RNIVDISMFIRTRQLRGAIFYLGGSGDRSSPSSNGAGSEETSYIAA-EME-AGELFVRLQFNSTPESYNVGGVKLADGNN 171 (979)
Q Consensus 94 ~~~~~isl~FrT~~~~GlLly~~~~~~~~~~~~~~~~~~~~dfi~l-~L~-~G~l~~~~~~g~~~~~~~~~~~~lnDg~W 171 (979)
..--.++-..|-.+-.-+-=|-+++ ...|++| .+. +|.+.+.+....+..+ ..++. +|+.|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~r~~~~~~~~~~g~~~~~~~~~~g~~~-~~~g~--~~~~~ 153 (781)
T 1w0p_A 91 SFGWRMTTEMKVLSGGMITNYYANG--------------TQRVLPIISLDSSGNLVVEFEGQTGRTV-LATGT--AATEY 153 (781)
T ss_dssp HHCEEEEEEEEEEEESCBCCEEECS--------------SEEECEEEEECTTSCEEEEETTCCSCEE-EECGG--GGGSC
T ss_pred hcCceEEEEEEEecCCceeeeecCC--------------CceEEEEEEEcCCCcEEEEEEccCCCee-eccCC--CCCce
Confidence 3455677777765544444444431 4457655 443 4888888854445444 34433 99999
Q ss_pred EEEEEEEEc---eEEEEEECCEEeE
Q psy9685 172 HLIQVVRNV---TLVQVKLNGTEYF 193 (979)
Q Consensus 172 H~V~v~r~~---~~~~L~VD~~~~~ 193 (979)
|.+++..+. ..+.+.+||....
T Consensus 154 h~~~~~~~~~~~~~~~f~~dG~l~~ 178 (781)
T 1w0p_A 154 HKFELVFLPGSNPSASFYFDGKLIR 178 (781)
T ss_dssp EEEEEEEECSSSCEEEEEETTEEEE
T ss_pred eEEEEEeecCCCceeEEecCCcEEE
Confidence 999888544 5889999998765
No 268
>1fx5_A UEA-I, UE-I, anti-H(O) lectin I; legume lectin, HOMO-dimer, fucose specific lectin, SUG binding protein; HET: NAG FUC BMA MAN; 2.20A {Ulex europaeus} SCOP: b.29.1.1 PDB: 1jxn_A*
Probab=21.06 E-value=6.2e+02 Score=25.14 Aligned_cols=53 Identities=13% Similarity=0.187 Sum_probs=32.7
Q ss_pred CCEEEEEEe---CcE-------EEEEEEeCCcceEEeecCeeecCC--CcEEEEEEEEce--EEEEEE
Q psy9685 134 TSYIAAEME---AGE-------LFVRLQFNSTPESYNVGGVKLADG--NNHLIQVVRNVT--LVQVKL 187 (979)
Q Consensus 134 ~dfi~l~L~---~G~-------l~~~~~~g~~~~~~~~~~~~lnDg--~WH~V~v~r~~~--~~~L~V 187 (979)
..++|||+. +.. =++-+|..+-.. .......+.+| ++|+|.|..+.. .+.+.|
T Consensus 119 n~~vAVEFDT~~N~~~~~Dp~~nHVGIdvNs~~S-~~~~~~~l~~G~~~~~~v~I~Yd~~~~~L~V~l 185 (242)
T 1fx5_A 119 YQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKS-INAERWNKRYGLNNVANVEIIYEASSKTLTASL 185 (242)
T ss_dssp GCCEEEEEECCCTTTSTTSCSSCEEEEEESSSSC-SEEEECCCCCSGGGCEEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEeccccCcccccCCCCCeEEEecCCccc-cceecccccCCCceeEEEEEEEeCCCCEEEEEE
Confidence 358899974 211 255666665321 12222358899 999999999984 555544
No 269
>1aqs_A Cu-MT, Cu-metallothionein; copper detoxification, metal-thiolate cluster; NMR {Saccharomyces cerevisiae} SCOP: g.46.1.1
Probab=21.05 E-value=88 Score=21.53 Aligned_cols=7 Identities=29% Similarity=1.042 Sum_probs=4.3
Q ss_pred eecCCCC
Q psy9685 849 KCACQFD 855 (979)
Q Consensus 849 ~C~C~~g 855 (979)
.|+|+.|
T Consensus 23 scscptg 29 (53)
T 1aqs_A 23 SCSCPTG 29 (53)
T ss_dssp SCSCCTT
T ss_pred cCCCCCC
Confidence 4666665
No 270
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.64 E-value=2e+02 Score=21.33 Aligned_cols=14 Identities=0% Similarity=-0.149 Sum_probs=5.9
Q ss_pred HHHHHHHhhhhhcc
Q psy9685 934 SMAVLCLMARQKRG 947 (979)
Q Consensus 934 ~~~~~~~~~r~~r~ 947 (979)
++++.+++.-..+|
T Consensus 28 li~~~LwK~GFFkR 41 (54)
T 2knc_A 28 ILVLAMWKVGFFKR 41 (54)
T ss_dssp HHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCcccC
Confidence 33344444444444
No 271
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=20.58 E-value=66 Score=39.57 Aligned_cols=35 Identities=31% Similarity=0.589 Sum_probs=21.3
Q ss_pred CCCCCCCCCCeeccCCCceeeecCCCCCCCccccc
Q psy9685 605 CVTHNCQNGARCIDGVARYSCECTPGWEGALCEKE 639 (979)
Q Consensus 605 C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 639 (979)
|.-.||.+++.+........|.|++||.|..|+..
T Consensus 500 c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 500 CQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp GGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCB
T ss_pred ccCCCCCCCCEeecCCCceEEEccCCccccCccCc
Confidence 33346666666665555566667777777666543
No 272
>1f9k_A Acidic lectin; legume lectin, glycosylated protein, H-antigenic specificity agglutinin, sugar binding protein; HET: NAG MAN AMG; 3.00A {Psophocarpus tetragonolobus} SCOP: b.29.1.1 PDB: 1fay_A*
Probab=20.45 E-value=2.7e+02 Score=27.72 Aligned_cols=54 Identities=17% Similarity=0.174 Sum_probs=32.7
Q ss_pred CCEEEEEEeCc-------EEEEEEEeCCcceEEeecCeeecCCCcEEEEEEEEce--EEEEEEC
Q psy9685 134 TSYIAAEMEAG-------ELFVRLQFNSTPESYNVGGVKLADGNNHLIQVVRNVT--LVQVKLN 188 (979)
Q Consensus 134 ~dfi~l~L~~G-------~l~~~~~~g~~~~~~~~~~~~lnDg~WH~V~v~r~~~--~~~L~VD 188 (979)
..++|||+.-= .-++-++..+- ..+......+.+|++|+|.|..+.. .+.+.++
T Consensus 117 ~~~vAVEFDT~~N~~Dp~~nHVgIdvns~-~S~~s~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~ 179 (238)
T 1f9k_A 117 DNAFAVEFDTFQNTWDPQVPHIGIDVNSI-VSSKTLHFQLENGGVANVVIKYDSPTKILNVVLA 179 (238)
T ss_dssp SCCEEEEEECSCCTTCCSSSEEEEEESSS-SCSEEEECCCCTTCCEEEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEEecccCCCCCCCCeEEEecCCc-cccceEeecccCCCEEEEEEEEeCCCCEEEEEEe
Confidence 56889987521 12445565543 1112222358899999999999983 5555553
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=20.03 E-value=58 Score=34.12 Aligned_cols=22 Identities=23% Similarity=0.466 Sum_probs=17.3
Q ss_pred ceEecCC------CCeEEecCCCCcCCC
Q psy9685 735 GQCIDDV------NAFICNCTNTATGAS 756 (979)
Q Consensus 735 g~C~~~~------g~~~C~C~~g~~g~~ 756 (979)
+.|.+.+ ++|+|.|+.||....
T Consensus 282 ~~C~~~p~~~~~~~~~~C~C~~g~~l~~ 309 (316)
T 1ijq_A 282 YLCLPAPQINPHSPKFTCACPDGMLLAR 309 (316)
T ss_dssp SEEEECCCCSTTCCSEEEECCTTCEECT
T ss_pred cccCCCccccCCCCCeEeeCCCCCEECC
Confidence 5788764 589999999997653
Done!