RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9686
(769 letters)
>d1qqya_ d.2.1.2 (A:) Lysozyme {Dog (Canis familiaris), milk [TaxId:
9615]}
Length = 130
Score = 121 bits (305), Expect = 5e-33
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 10/129 (7%)
Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
K F CELA+ L G + WVC+A ESN N+ A + +N NGS D+GIFQ+N
Sbjct: 2 KIFSKCELARKLKSMGMDGFHGYSLANWVCMAEYESNFNTQAFNGRNSNGSSDYGIFQLN 61
Query: 337 DKYWCTASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYC 394
K+WC ++ + C+ CS F D+NI DD+AC ++ G AW + +C
Sbjct: 62 SKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPN-----GMSAWVAWVKHC 116
Query: 395 NTNSKVSTY 403
+S Y
Sbjct: 117 K-GKDLSKY 124
Score = 79.6 bits (196), Expect = 3e-18
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 15 GSRDHGIFQINDKYWCTASGP-AGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 73
GS D+GIFQ+N K+WC ++ + C+ CS F D+NI DD+AC ++ G
Sbjct: 51 GSSDYGIFQLNSKWWCKSNSHSSANACNIMCSKFLDDNIDDDIACAKRVVKDPN-----G 105
Query: 74 FQAWSTY-HYCNTNSKVSTYYS 94
AW + +C +S Y +
Sbjct: 106 MSAWVAWVKHCK-GKDLSKYLA 126
>d1gd6a_ d.2.1.2 (A:) Lysozyme {Silkworm (Bombyx mori) [TaxId:
7091]}
Length = 119
Score = 118 bits (298), Expect = 3e-32
Identities = 41/118 (34%), Positives = 64/118 (54%), Gaps = 9/118 (7%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
K F C L L + G + WVC+ ES+R+++ + N NGS+D+G+FQIND+
Sbjct: 1 KTFTRCGLVHELRKH-GFEENLMRNWVCLVEHESSRDTSKTNT-NRNGSKDYGLFQINDR 58
Query: 339 YWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
YWC+ GK+C+ KCS ++IT C KI+ + + F AW + ++C
Sbjct: 59 YWCSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIYKR------HRFDAWYGWKNHCQ 110
Score = 80.7 bits (199), Expect = 9e-19
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 15 GSRDHGIFQINDKYWCTASGPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGF 74
GS+D+G+FQIND+YWC+ GK+C+ KCS ++IT C KI+ + + F
Sbjct: 46 GSKDYGLFQINDRYWCSKGASPGKDCNVKCSDLLTDDITKAAKCAKKIYKR------HRF 99
Query: 75 QAWSTY-HYCN 84
AW + ++C
Sbjct: 100 DAWYGWKNHCQ 110
>d2nwdx1 d.2.1.2 (X:1-130) Lysozyme {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 118 bits (297), Expect = 7e-32
Identities = 47/130 (36%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
K F CELA+ L R G + W+C+A ES N+ A + G+ S D+GIFQIN
Sbjct: 1 KVFERCELARTLKRLGMDGYRGISLANWMCLAKWESGYNTRATNYNAGDRSTDYGIFQIN 60
Query: 337 DKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
+YWC A CH CS+ +NI D VAC ++ Q G +AW + +
Sbjct: 61 SRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ-----GIRAWVAWRNR 115
Query: 394 CNTNSKVSTY 403
C N V Y
Sbjct: 116 CQ-NRDVRQY 124
Score = 76.1 bits (187), Expect = 4e-17
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 15 GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
S D+GIFQIN +YWC A CH CS+ +NI D VAC ++ Q
Sbjct: 50 RSTDYGIFQINSRYWCNDGKTPGAVNACHLSCSALLQDNIADAVACAKRVVRDPQ----- 104
Query: 73 GFQAWSTY-HYCNTNSKVSTY 92
G +AW + + C N V Y
Sbjct: 105 GIRAWVAWRNRCQ-NRDVRQY 124
>d1yroa1 d.2.1.2 (A:1-123) alpha-Lactalbumin {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 123
Score = 116 bits (291), Expect = 3e-31
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 280 RFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKY 339
C+++ + G + W C+ S ++ A N NGS ++G+FQI+D++
Sbjct: 2 ELTKCKVSHAIKDIDGYQGISLLEWACVLFHTSGYDTQAVV--NDNGSTEYGLFQISDRF 59
Query: 340 WCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
WC +S + C C D+ + DD+AC KI + G W Y C+
Sbjct: 60 WCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------KGIDYWKAYKPMCS 112
Score = 75.7 bits (186), Expect = 5e-17
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 15 GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
GS ++G+FQI+D++WC +S + C C D+ + DD+AC KI +
Sbjct: 46 GSTEYGLFQISDRFWCKSSEFPESENICGISCDKLLDDELDDDIACAKKILAI------K 99
Query: 73 GFQAWSTY-HYCN 84
G W Y C+
Sbjct: 100 GIDYWKAYKPMCS 112
>d1b9oa_ d.2.1.2 (A:) alpha-Lactalbumin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 123
Score = 116 bits (291), Expect = 3e-31
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
K+F CEL++ L G +P +C S ++ A + S ++G+FQI++K
Sbjct: 1 KQFTKCELSQLLKDIDGYGGIALPELICTMFHTSGYDTQAIV--ENDESTEYGLFQISNK 58
Query: 339 YWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
WC +S + C C F D++ITDD+ C KI G W + C
Sbjct: 59 LWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------KGIDYWLAHKALCT 112
Score = 74.9 bits (184), Expect = 1e-16
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 15 GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
S ++G+FQI++K WC +S + C C F D++ITDD+ C KI
Sbjct: 46 ESTEYGLFQISNKLWCKSSQVPQSRNICDISCDKFLDDDITDDIMCAKKILDI------K 99
Query: 73 GFQAWSTY-HYCN 84
G W + C
Sbjct: 100 GIDYWLAHKALCT 112
>d1hfxa_ d.2.1.2 (A:) alpha-Lactalbumin {Guinea pig (Cavia
porcellus) [TaxId: 10141]}
Length = 123
Score = 115 bits (289), Expect = 5e-31
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 279 KRFGACELAKFLVRQRGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDK 338
K+ C L+ L G +P W+CI S ++ A + +++G+FQINDK
Sbjct: 1 KQLTKCALSHELNDLAGYRDITLPEWLCIIFHISGYDTQAIV--KNSDHKEYGLFQINDK 58
Query: 339 YWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HYCN 395
+C +S + C C D+++TDD+ CV KI G W + C+
Sbjct: 59 DFCESSTTVQSRNICDISCDKLLDDDLTDDIMCVKKILDI------KGIDYWLAHKPLCS 112
Score = 74.5 bits (183), Expect = 1e-16
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 16 SRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNG 73
+++G+FQINDK +C +S + C C D+++TDD+ CV KI G
Sbjct: 47 HKEYGLFQINDKDFCESSTTVQSRNICDISCDKLLDDDLTDDIMCVKKILDI------KG 100
Query: 74 FQAWSTY-HYCN 84
W + C+
Sbjct: 101 IDYWLAHKPLCS 112
>d2vb1a1 d.2.1.2 (A:1-129) Lysozyme {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 129
Score = 110 bits (276), Expect = 4e-29
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
K FG CELA + R + WVC A ESN N+ A + N +GS D+GI QIN
Sbjct: 1 KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNR-NTDGSTDYGILQIN 59
Query: 337 DKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
++WC + C+ CS+ ++IT V C KI S G AW + +
Sbjct: 60 SRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN-----GMNAWVAWRNR 114
Query: 394 CNTNSKVSTY 403
C + V +
Sbjct: 115 CK-GTDVQAW 123
Score = 77.6 bits (191), Expect = 1e-17
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 15 GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
GS D+GI QIN ++WC + C+ CS+ ++IT V C KI S
Sbjct: 49 GSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGN----- 103
Query: 73 GFQAWSTY-HYCNTNSKVSTY 92
G AW + + C + V +
Sbjct: 104 GMNAWVAWRNRCK-GTDVQAW 123
>d1lmqa_ d.2.1.2 (A:) Lysozyme {Rainbow trout (Oncorhynchus mykiss)
[TaxId: 8022]}
Length = 129
Score = 109 bits (275), Expect = 6e-29
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 279 KRFGACELAKFLVRQ--RGIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
K + CELA+ L G A +P WVC++ ES+ N+ A + N +GS D+GIFQIN
Sbjct: 1 KVYDRCELARALKASGMDGYAGNSLPNWVCLSKWESSYNTQATNR-NTDGSTDYGIFQIN 59
Query: 337 DKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
+YWC A C +CS +++T + C ++ G AW + +
Sbjct: 60 SRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDPN-----GIGAWVAWRLH 114
Query: 394 C 394
C
Sbjct: 115 C 115
Score = 74.9 bits (184), Expect = 1e-16
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 15 GSRDHGIFQINDKYWCTAS--GPAGKECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
GS D+GIFQIN +YWC A C +CS +++T + C ++
Sbjct: 49 GSTDYGIFQINSRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVVLDPN----- 103
Query: 73 GFQAWSTY-HYC 83
G AW + +C
Sbjct: 104 GIGAWVAWRLHC 115
>d1juga_ d.2.1.2 (A:) Lysozyme {Australian echidna (Tachyglossus
aculeatus) [TaxId: 9261]}
Length = 125
Score = 108 bits (271), Expect = 2e-28
Identities = 44/130 (33%), Positives = 60/130 (46%), Gaps = 12/130 (9%)
Query: 279 KRFGACELAKFLVRQR--GIARRDVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQIN 336
K EL K LV Q G +P WVC A ES+ N+ A + +GS D+GI QIN
Sbjct: 1 KILKKQELCKNLVAQGMNGYQHITLPNWVCTAFHESSYNTRATNHNT-DGSTDYGILQIN 59
Query: 337 DKYWCTASGPAGK--ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGNGFQAWSTY-HY 393
+YWC G C+ CS D++ITDD+ C KI + + G W +
Sbjct: 60 SRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK-----GLTPWVAWKSK 114
Query: 394 CNTNSKVSTY 403
C +S +
Sbjct: 115 CR-GHDLSKF 123
Score = 76.4 bits (188), Expect = 3e-17
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 15 GSRDHGIFQINDKYWCTASGPAGK--ECHAKCSSFEDNNITDDVACVVKIHSQTQRARGN 72
GS D+GI QIN +YWC G C+ CS D++ITDD+ C KI + +
Sbjct: 49 GSTDYGILQINSRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIAGEAK----- 103
Query: 73 GFQAWSTY-HYCNTNSKVSTYY 93
G W + C +S +
Sbjct: 104 GLTPWVAWKSKCR-GHDLSKFK 124
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 39.9 bits (93), Expect = 2e-05
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVES 734
C N TC + C C +GF G E+ +
Sbjct: 4 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 40
Score = 33.3 bits (76), Expect = 0.006
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C+ C N GTC +F C CP G G+
Sbjct: 1 CSEPRCFNGGTCQQALYF-SDFVCQCPEGFAGK 32
Score = 30.6 bits (69), Expect = 0.043
Identities = 7/25 (28%), Positives = 9/25 (36%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKG 678
C N TC + C C +G
Sbjct: 4 PRCFNGGTCQQALYFSDFVCQCPEG 28
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 39.9 bits (93), Expect = 3e-05
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
C N C+ TC C+ G+ G +
Sbjct: 12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQ 43
Score = 34.5 bits (79), Expect = 0.002
Identities = 9/33 (27%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C N G C + + ++TC C G G
Sbjct: 9 SYDGYCLNGGVCMHIE-SLDSYTCNCVIGYSGD 40
Score = 33.3 bits (76), Expect = 0.006
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFEN 690
C N C+ TC C+ G + + CQ +
Sbjct: 12 GYCLNGGVCMHIESLDSYTCNCVIGYS--GDRCQTRD 46
Score = 27.9 bits (62), Expect = 0.50
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 624 DGNLSFYCNCTEDFTGEYCQFEN 646
+ S+ CNC ++G+ CQ +
Sbjct: 24 ESLDSYTCNCVIGYSGDRCQTRD 46
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 38.5 bits (90), Expect = 7e-05
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHREL 730
NPC N +C C C GFEG + EL
Sbjct: 9 NPCLNGGSCKDDINS--YECWCPFGFEGKNCEL 39
Score = 37.7 bits (88), Expect = 1e-04
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C PC N G+C + C CP G +G+
Sbjct: 6 CESNPCLNGGSCKDDINS---YECWCPFGFEGK 35
Score = 30.0 bits (68), Expect = 0.079
Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 2/25 (8%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKG 678
NPC N +C C C G
Sbjct: 9 NPCLNGGSCKDDINS--YECWCPFG 31
Score = 26.2 bits (58), Expect = 1.8
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 624 DGNLSFYCNCTEDFTGEYCQ 643
D S+ C C F G+ C+
Sbjct: 19 DDINSYECWCPFGFEGKNCE 38
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 37.8 bits (88), Expect = 1e-04
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
+PCQN +C C CL FEG +
Sbjct: 8 SPCQNGGSCKDQLQS--YICFCLPAFEGRN 35
Score = 37.0 bits (86), Expect = 2e-04
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
CA PC+N G+C + C C +G+
Sbjct: 5 CASSPCQNGGSCKDQLQS---YICFCLPAFEGR 34
Score = 30.0 bits (68), Expect = 0.067
Identities = 8/25 (32%), Positives = 10/25 (40%), Gaps = 2/25 (8%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKG 678
+PCQN +C C CL
Sbjct: 8 SPCQNGGSCKDQLQS--YICFCLPA 30
Score = 26.2 bits (58), Expect = 1.8
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 624 DGNLSFYCNCTEDFTGEYCQ 643
D S+ C C F G C+
Sbjct: 18 DQLQSYICFCLPAFEGRNCE 37
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 37.7 bits (88), Expect = 1e-04
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRELPV 732
+PCQN C G+ TC CL+GFEG + EL
Sbjct: 6 SPCQNQGKCKDGLGE--YTCTCLEGFEGKNCELFT 38
Score = 37.4 bits (87), Expect = 2e-04
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C PC+N G C G +TCTC G +G+
Sbjct: 3 CETSPCQNQGKCKDGLGE---YTCTCLEGFEGK 32
Score = 29.3 bits (66), Expect = 0.12
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKG 678
+PCQN C G+ TC CL+G
Sbjct: 6 SPCQNQGKCKDGLGE--YTCTCLEG 28
Score = 25.4 bits (56), Expect = 2.6
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 624 DGNLSFYCNCTEDFTGEYCQ 643
DG + C C E F G+ C+
Sbjct: 16 DGLGEYTCTCLEGFEGKNCE 35
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 37.8 bits (88), Expect = 1e-04
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
NPC++ C+ + G C CL+G+ GP
Sbjct: 11 NPCEHAGKCINTLGS--FECQCLQGYTGPR 38
Score = 33.9 bits (78), Expect = 0.003
Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 3/29 (10%)
Query: 522 PCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
PC + G C G F C C G G
Sbjct: 12 PCEHAGKCINTLGS---FECQCLQGYTGP 37
Score = 30.5 bits (69), Expect = 0.056
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKG 678
NPC++ C+ + G C CL+G
Sbjct: 11 NPCEHAGKCINTLGS--FECQCLQG 33
Score = 25.8 bits (57), Expect = 2.2
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 624 DGNLSFYCNCTEDFTGEYCQ 643
+ SF C C + +TG C+
Sbjct: 21 NTLGSFECQCLQGYTGPRCE 40
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 37.5 bits (87), Expect = 2e-04
Identities = 6/30 (20%), Positives = 12/30 (40%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
C ++ C+ + C C+ G+ G
Sbjct: 10 GYCLHDGVCMYIEALDKYACNCVVGYIGER 39
Score = 32.5 bits (74), Expect = 0.011
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C ++G C + + C C G G+
Sbjct: 7 SHDGYCLHDGVCMYIEAL-DKYACNCVVGYIGE 38
Score = 31.4 bits (71), Expect = 0.028
Identities = 8/37 (21%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKGGTVSSEYCQFEN 690
C ++ C+ + C C+ G E CQ+ +
Sbjct: 10 GYCLHDGVCMYIEALDKYACNCVVGYI--GERCQYRD 44
Score = 25.6 bits (56), Expect = 3.1
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 624 DGNLSFYCNCTEDFTGEYCQFEN 646
+ + CNC + GE CQ+ +
Sbjct: 22 EALDKYACNCVVGYIGERCQYRD 44
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 37.0 bits (86), Expect = 2e-04
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C PC+N+ TC G F C C G +G
Sbjct: 4 CVSNPCQNDATCLDQIGE---FQCICMPGYEGV 33
Score = 37.0 bits (86), Expect = 2e-04
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
NPCQN+ATC+ G+ C+C+ G+EG H
Sbjct: 7 NPCQNDATCLDQIGE--FQCICMPGYEGVH 34
Score = 29.6 bits (67), Expect = 0.092
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKG 678
NPCQN+ATC+ G+ C+C+ G
Sbjct: 7 NPCQNDATCLDQIGE--FQCICMPG 29
Score = 25.4 bits (56), Expect = 2.7
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 624 DGNLSFYCNCTEDFTGEYCQ 643
D F C C + G +C+
Sbjct: 17 DQIGEFQCICMPGYEGVHCE 36
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 37.0 bits (86), Expect = 2e-04
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
+PC +N C+ + C C GF G +
Sbjct: 6 SPCLHNGRCLDKINE--FQCECPTGFTGHLCQ 35
Score = 36.6 bits (85), Expect = 3e-04
Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 3/33 (9%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
CA PC +NG C F C CP+G G
Sbjct: 3 CASSPCLHNGRCLDKINE---FQCECPTGFTGH 32
Score = 28.9 bits (65), Expect = 0.14
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKG 678
+PC +N C+ + C C G
Sbjct: 6 SPCLHNGRCLDKINE--FQCECPTG 28
Score = 25.8 bits (57), Expect = 1.8
Identities = 9/20 (45%), Positives = 9/20 (45%)
Query: 624 DGNLSFYCNCTEDFTGEYCQ 643
D F C C FTG CQ
Sbjct: 16 DKINEFQCECPTGFTGHLCQ 35
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 36.3 bits (84), Expect = 4e-04
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 692 AACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRELPVE 733
A+C C C+ + G+ TC C GF GP E +
Sbjct: 2 ASCQD-MSCSKQGECLETIGN--YTCSCYPGFYGPECEYVRD 40
Score = 34.4 bits (79), Expect = 0.002
Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 3/33 (9%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C C G C G +TC+C G G
Sbjct: 4 CQDMSCSKQGECLETIGN---YTCSCYPGFYGP 33
Score = 28.2 bits (63), Expect = 0.27
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 648 AACVTLNPCQNNATCVASPGDKQITCLCLKG 678
A+C C C+ + G+ TC C G
Sbjct: 2 ASCQD-MSCSKQGECLETIGN--YTCSCYPG 29
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 35.5 bits (82), Expect = 7e-04
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 691 SAACVTLNPCQNNATCVASPGDKQITCLCLKGFEGPHRE 729
+AAC C + CV + + TC C GF G E
Sbjct: 1 TAACTN-TSCSGHGECVETINN--YTCKCDPGFSGLKCE 36
Score = 34.0 bits (78), Expect = 0.002
Identities = 9/33 (27%), Positives = 11/33 (33%), Gaps = 3/33 (9%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C C +G C +TC C G G
Sbjct: 4 CTNTSCSGHGECVETINN---YTCKCDPGFSGL 33
Score = 28.2 bits (63), Expect = 0.34
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 647 SAACVTLNPCQNNATCVASPGDKQITCLCLKG 678
+AAC C + CV + + TC C G
Sbjct: 1 TAACTN-TSCSGHGECVETINN--YTCKCDPG 29
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 34.8 bits (80), Expect = 0.001
Identities = 9/30 (30%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGG 547
C PC+N G C + C C G
Sbjct: 4 CCSNPCQNRGECMSTGFD--QYKCDCTRTG 31
Score = 33.2 bits (76), Expect = 0.005
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 698 NPCQNNATCVASPGDKQITCLCLK-GFEGPHRELP 731
NPCQN C+++ D Q C C + GF G + P
Sbjct: 7 NPCQNRGECMSTGFD-QYKCDCTRTGFYGENCTTP 40
Score = 28.2 bits (63), Expect = 0.35
Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKGG 679
NPCQN C+++ D Q C C + G
Sbjct: 7 NPCQNRGECMSTGFD-QYKCDCTRTG 31
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 34.8 bits (80), Expect = 0.002
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 2/30 (6%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGG 547
C PC++ G C + C C G
Sbjct: 5 CCYYPCQHQGICVRFGLD--RYQCDCTRTG 32
Score = 32.9 bits (75), Expect = 0.008
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Query: 698 NPCQNNATCVASPGDKQITCLC-LKGFEGPHRELP 731
PCQ+ CV D + C C G+ GP+ +P
Sbjct: 8 YPCQHQGICVRFGLD-RYQCDCTRTGYSGPNCTIP 41
Score = 27.9 bits (62), Expect = 0.48
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 654 NPCQNNATCVASPGDKQITCLCLKGG 679
PCQ+ CV D + C C + G
Sbjct: 8 YPCQHQGICVRFGLD-RYQCDCTRTG 32
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 33.8 bits (77), Expect = 0.005
Identities = 9/35 (25%), Positives = 10/35 (28%), Gaps = 2/35 (5%)
Query: 518 CAGRPCRNNGTCTPVSG--GVVNFTCTCPSGGQGQ 550
C N G C V + C C G G
Sbjct: 9 KEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGA 43
Score = 33.4 bits (76), Expect = 0.007
Identities = 8/33 (24%), Positives = 8/33 (24%), Gaps = 3/33 (9%)
Query: 698 NPCQNNATCVASPGDKQI---TCLCLKGFEGPH 727
C N C C C GF G
Sbjct: 12 TFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR 44
Score = 26.5 bits (58), Expect = 2.0
Identities = 6/28 (21%), Positives = 6/28 (21%), Gaps = 3/28 (10%)
Query: 654 NPCQNNATCVASPGDKQI---TCLCLKG 678
C N C C C G
Sbjct: 12 TFCVNGGECFMVKDLSNPSRYLCKCQPG 39
Score = 26.5 bits (58), Expect = 2.1
Identities = 6/29 (20%), Positives = 7/29 (24%)
Query: 624 DGNLSFYCNCTEDFTGEYCQFENSAACVT 652
+ C C FTG C
Sbjct: 27 SNPSRYLCKCQPGFTGARCTENVPMKVQN 55
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 30.5 bits (69), Expect = 0.060
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
CA C + GTC G F+C C SG +G+
Sbjct: 11 CASLCCGH-GTCIDGIGS---FSCDCRSGWEGR 39
Score = 28.6 bits (64), Expect = 0.25
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
C + TC+ G +C C G+EG
Sbjct: 14 LCCGH-GTCIDGIGS--FSCDCRSGWEGRF 40
Score = 24.8 bits (54), Expect = 7.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 624 DGNLSFYCNCTEDFTGEYCQFE 645
DG SF C+C + G +CQ E
Sbjct: 23 DGIGSFSCDCRSGWEGRFCQRE 44
>d2gnxa1 a.246.3.1 (A:123-294) Hypothetical protein BC048403 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 172
Score = 32.1 bits (73), Expect = 0.14
Identities = 14/52 (26%), Positives = 28/52 (53%)
Query: 564 KLKTLVMVQYYFRRKSTSPHKSRGQGQSGLEITPVYLWLMKMKTLVMVQYYL 615
K Q + +++ T H GQ Q ++ ++LWLMK+KT+++ ++
Sbjct: 98 HTKLQSWGQTFEKQRETKKHLFGGQSQKAVQPPHLFLWLMKLKTMLLAKFSF 149
Score = 29.4 bits (66), Expect = 0.93
Identities = 14/32 (43%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 546 GGQGQSGLEITPVYLWLMKLKTLVMVQY--YF 575
GGQ Q ++ ++LWLMKLKT+++ ++ YF
Sbjct: 120 GGQSQKAVQPPHLFLWLMKLKTMLLAKFSFYF 151
>d1xsfa1 d.2.1.8 (A:23-108) Probable resuscitation-promoting factor
RpfB {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 86
Score = 29.4 bits (66), Expect = 0.36
Identities = 21/93 (22%), Positives = 29/93 (31%), Gaps = 25/93 (26%)
Query: 300 DVPTWVCIATKESNRNSNARSPKNGNGSRDHGIFQINDKYWCTASGPAGKECHAKCSSFE 359
D W IA E+ N GNG +G Q + W A+G A ++ E
Sbjct: 5 DGSIWDAIAGCEAGGNWAIN---TGNGY--YGGVQFDQGTW-EANGGLRYAPRADLATRE 58
Query: 360 DNNITDDVACVVKIHSQTQRA----RGNGFQAW 388
+ Q A G+ AW
Sbjct: 59 E---------------QIAVAEVTRLRQGWGAW 76
>d1gbsa_ d.2.1.5 (A:) Lysozyme {Australian black swan (Cygnus
atratus) [TaxId: 8868]}
Length = 185
Score = 30.9 bits (69), Expect = 0.41
Identities = 6/34 (17%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 307 IATKESNRNSNARSPKNGNGSRDHGIFQINDKYW 340
I ++ES+ ++ G+ G+ Q++ +
Sbjct: 69 IISRESHAGKVLKNGW-GDRGNGFGLMQVDKRSH 101
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 28.0 bits (62), Expect = 0.60
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 699 PCQNNATCVASPGDKQITCL-CLKGFEGPH 727
PC ++C P K++ C C G G
Sbjct: 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKR 31
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 27.4 bits (61), Expect = 0.63
Identities = 8/29 (27%), Positives = 10/29 (34%), Gaps = 3/29 (10%)
Query: 518 CAGRPCRNNGTCTPVSGGVVNFTCTCPSG 546
C +G C G + C CP G
Sbjct: 8 CKEPDVCKHGQCINTDGS---YRCECPFG 33
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 27.1 bits (60), Expect = 0.75
Identities = 6/28 (21%), Positives = 10/28 (35%), Gaps = 2/28 (7%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEG 725
+ C +A C C C+ + G
Sbjct: 7 HQCSVHAECRDYAT--GFCCRCVANYTG 32
Score = 25.6 bits (56), Expect = 2.7
Identities = 7/28 (25%), Positives = 10/28 (35%), Gaps = 3/28 (10%)
Query: 522 PCRNNGTCTPVSGGVVNFTCTCPSGGQG 549
C + C + G F C C + G
Sbjct: 8 QCSVHAECRDYATG---FCCRCVANYTG 32
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 27.2 bits (60), Expect = 0.76
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 700 CQNNATCVASPGDKQIT-CLCLKGFEGPHREL 730
C N TCV++ I C C K F G H E+
Sbjct: 4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 35
>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 39
Score = 26.8 bits (59), Expect = 1.0
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
Query: 520 GRPCRNNGTCTPVSGGVVNFTCTCPSG 546
G PC NGTC V GG F CTC G
Sbjct: 7 GNPC-GNGTCKNVIGG---FECTCEEG 29
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor,
HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 26.6 bits (59), Expect = 1.2
Identities = 5/15 (33%), Positives = 6/15 (40%)
Query: 630 YCNCTEDFTGEYCQF 644
C C + GE C
Sbjct: 25 SCICHPGYHGERCHG 39
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 50
Score = 26.3 bits (58), Expect = 1.6
Identities = 5/30 (16%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
+ C ++ +C+C +G+ G
Sbjct: 14 HYCIKGRCRFV-VAEQTPSCVCDEGYIGAR 42
Score = 26.0 bits (57), Expect = 2.6
Identities = 5/17 (29%), Positives = 8/17 (47%)
Query: 628 SFYCNCTEDFTGEYCQF 644
+ C C E + G C+
Sbjct: 29 TPSCVCDEGYIGARCER 45
Score = 24.4 bits (53), Expect = 8.9
Identities = 6/29 (20%), Positives = 8/29 (27%), Gaps = 2/29 (6%)
Query: 522 PCRNNGTCTPVSGGVVNFTCTCPSGGQGQ 550
C V+ +C C G G
Sbjct: 15 YCIKGRCRFVVAEQ--TPSCVCDEGYIGA 41
>d1q5qa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Rhodococcus erythropolis [TaxId: 1833]}
Length = 227
Score = 29.2 bits (65), Expect = 1.7
Identities = 6/77 (7%), Positives = 21/77 (27%), Gaps = 12/77 (15%)
Query: 12 DCRGSRDHGIFQINDKYWCTASGPAG----------KECHAKCSSFEDNNITDDVAC--V 59
+ + H + ++ D+ A G + S++ ++T
Sbjct: 36 ENPSTALHKVSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAY 95
Query: 60 VKIHSQTQRARGNGFQA 76
+ + ++
Sbjct: 96 AQTLGTIFTEQPKPYEV 112
Score = 27.3 bits (60), Expect = 5.4
Identities = 7/117 (5%), Positives = 24/117 (20%), Gaps = 25/117 (21%)
Query: 332 IFQINDKYWCTASGPAG----------KECHAKCSSFEDNNITDDVAC--VVKIHSQTQR 379
+ ++ D+ A G + S++ ++T +
Sbjct: 45 VSELYDRLGFAAVGKYNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQTLGTIFT 104
Query: 380 ARGNGFQA------WSTYH-------YCNTNSKVSTYDHADDMGEVSACACYMHVNY 423
+ ++ Y T + + + +
Sbjct: 105 EQPKPYEVEICVAEVGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRE 161
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 25.9 bits (57), Expect = 2.2
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 694 CVTLNPCQNNATCVASPGDKQITCLCLKGFEGPH 727
C CV +PGD C C +G+E
Sbjct: 6 CRISPDLCGRGQCVNTPGD--FECKCDEGYESGF 37
>d1sdia_ a.198.1.1 (A:) Hypothetical protein YcfC {Escherichia coli
[TaxId: 562]}
Length = 213
Score = 28.2 bits (63), Expect = 2.7
Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 19/114 (16%)
Query: 190 SDPIFTDRFRDRIWFLALLINLSSFFVSVPLMLISL-EIFKE-LNGLNFRIKVFSHCRNE 247
S D +RI L L F + ++ ++ I+ + ++ L RI+V
Sbjct: 101 SAKGALDTLGNRI--NGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQV------T 152
Query: 248 GRP---QSAMHFSPIAACLLVLVYCTLLPRQIEGKRFGACELAKFLVRQRGIAR 298
G P QS + + A LL + +L Q+ G R + + + +
Sbjct: 153 GSPAVLQSPQVQAKVRATLLAGIRAAVLWHQVGGGRL------QLMFSRNRLTT 200
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
sapiens) [TaxId: 9606]}
Length = 49
Score = 25.2 bits (55), Expect = 4.3
Identities = 4/21 (19%), Positives = 6/21 (28%)
Query: 624 DGNLSFYCNCTEDFTGEYCQF 644
C C + G C+
Sbjct: 24 VQEDKPACVCHSGYVGARCEH 44
Score = 24.8 bits (54), Expect = 7.6
Identities = 5/30 (16%), Positives = 10/30 (33%), Gaps = 1/30 (3%)
Query: 698 NPCQNNATCVASPGDKQITCLCLKGFEGPH 727
C + + + C+C G+ G
Sbjct: 13 QFCFHGTCRFL-VQEDKPACVCHSGYVGAR 41
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 46
Score = 25.1 bits (55), Expect = 4.4
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 628 SFYCNCTEDFTGEYCQ 643
YC C +TG C+
Sbjct: 27 QNYCRCEVGYTGVRCE 42
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.134 0.428
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,877,564
Number of extensions: 135842
Number of successful extensions: 572
Number of sequences better than 10.0: 1
Number of HSP's gapped: 496
Number of HSP's successfully gapped: 122
Length of query: 769
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 677
Effective length of database: 1,144,436
Effective search space: 774783172
Effective search space used: 774783172
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.0 bits)