Query psy9687
Match_columns 141
No_of_seqs 136 out of 1756
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 17:02:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9687.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9687hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.8 1.7E-19 5.9E-24 110.3 10.6 107 16-123 4-112 (135)
2 4d90_A EGF-like repeat and dis 99.8 4.9E-18 1.7E-22 104.7 8.4 106 18-124 1-127 (143)
3 2vj3_A Neurogenic locus notch 99.7 5.5E-18 1.9E-22 103.6 8.2 97 3-100 31-127 (135)
4 1z1y_A Ookinete surface protei 99.6 2.5E-17 8.4E-22 105.8 1.9 119 3-124 28-169 (186)
5 4d90_A EGF-like repeat and dis 99.6 2.7E-15 9.2E-20 92.4 8.5 88 3-91 26-132 (143)
6 1yo8_A Thrombospondin-2; EGF, 99.6 5.4E-15 1.8E-19 109.3 8.4 106 16-123 2-137 (634)
7 2bou_A EGF-like module contain 99.5 4.2E-14 1.4E-18 87.1 4.4 97 23-125 7-129 (143)
8 1z1y_A Ookinete surface protei 99.4 1.5E-14 5E-19 92.8 0.4 100 21-123 9-124 (186)
9 1tpg_A T-plasminogen activator 99.4 3.1E-13 1.1E-17 76.9 5.8 83 3-96 5-90 (91)
10 2bou_A EGF-like module contain 99.4 4E-13 1.4E-17 82.6 5.5 84 3-89 22-131 (143)
11 1dx5_I Thrombomodulin; serine 99.4 1.6E-13 5.4E-18 81.8 3.0 98 16-124 3-109 (118)
12 1yo8_A Thrombospondin-2; EGF, 99.3 6.4E-12 2.2E-16 93.1 8.8 95 3-99 29-155 (634)
13 1aut_L Activated protein C; se 99.3 3.2E-12 1.1E-16 75.7 5.7 90 16-110 5-108 (114)
14 1emn_A Fibrillin; extracellula 99.3 4.1E-12 1.4E-16 70.9 5.8 69 16-88 4-76 (82)
15 1x7a_L Coagulation factor IX, 99.3 2.7E-12 9.2E-17 79.2 5.3 77 12-91 44-125 (146)
16 1z6c_A Vitamin K-dependent pro 99.3 1.9E-12 6.6E-17 73.0 3.8 77 16-98 2-84 (87)
17 2c4f_L Coagulation factor VII 99.3 9E-12 3.1E-16 76.5 6.0 75 16-91 46-128 (142)
18 1nfu_B Coagulation factor XA, 99.2 2.2E-12 7.4E-17 82.9 2.0 76 12-91 38-120 (195)
19 1lmj_A Fibrillin 1; EGF, calci 99.2 8.9E-12 3E-16 70.1 4.0 69 16-88 2-79 (86)
20 1uzk_A Fibrillin-1; glycoprote 99.2 3.1E-12 1.1E-16 80.3 1.0 106 16-125 2-154 (162)
21 2vj2_A Jagged-1; signalling, p 99.2 1.5E-11 5.3E-16 77.6 3.5 106 3-123 53-162 (169)
22 2w86_A Fibrillin-1, fibrillin1 99.1 2.1E-12 7.3E-17 79.7 -1.3 106 15-124 2-138 (147)
23 2vh0_B Activated factor XA lig 99.1 9.2E-12 3.1E-16 75.7 1.3 76 12-91 38-120 (134)
24 1tpg_A T-plasminogen activator 99.1 3.9E-11 1.3E-15 68.1 3.6 76 37-123 1-79 (91)
25 2w2n_E LDL receptor, low-densi 99.1 2.8E-11 9.7E-16 70.7 2.0 77 3-87 17-99 (107)
26 3h5c_B Vitamin K-dependent pro 99.1 1.4E-10 4.9E-15 79.9 5.6 69 16-87 4-75 (317)
27 3fcs_B Integrin beta-3; beta p 99.1 3E-10 1E-14 85.2 7.3 104 3-119 461-588 (690)
28 2vj2_A Jagged-1; signalling, p 99.0 4.2E-10 1.4E-14 71.0 4.4 80 3-91 86-168 (169)
29 1emn_A Fibrillin; extracellula 99.0 1.1E-09 3.7E-14 61.0 4.8 67 55-124 4-74 (82)
30 2ygq_A WIF-1, WNT inhibitory f 98.9 2.6E-09 8.7E-14 73.9 6.4 91 3-109 168-258 (324)
31 4fbr_A Lectin, myxobacterial h 98.9 3.5E-12 1.2E-16 85.1 -7.7 85 10-96 93-206 (267)
32 3u7u_G Neuregulin 1; signaling 98.9 2.9E-09 1E-13 54.3 4.4 46 10-56 1-51 (55)
33 2ygq_A WIF-1, WNT inhibitory f 98.9 1.1E-09 3.8E-14 75.7 3.4 102 3-123 200-301 (324)
34 4fbr_A Lectin, myxobacterial h 98.9 8.5E-12 2.9E-16 83.2 -7.0 86 9-96 25-139 (267)
35 1lmj_A Fibrillin 1; EGF, calci 98.9 9.9E-10 3.4E-14 61.6 2.4 67 55-124 2-77 (86)
36 3fcs_B Integrin beta-3; beta p 98.9 5.8E-09 2E-13 78.4 7.1 94 6-110 514-616 (690)
37 1z6c_A Vitamin K-dependent pro 98.8 1.4E-09 4.9E-14 61.1 2.2 62 55-120 2-69 (87)
38 1x7a_L Coagulation factor IX, 98.8 4.2E-09 1.4E-13 64.8 4.4 72 51-124 44-116 (146)
39 3h5c_B Vitamin K-dependent pro 98.8 7.3E-09 2.5E-13 71.3 6.0 67 55-123 4-73 (317)
40 1dx5_I Thrombomodulin; serine 98.8 1E-09 3.5E-14 65.2 1.4 76 4-88 28-111 (118)
41 2c4f_L Coagulation factor VII 98.8 5E-09 1.7E-13 64.2 3.9 69 55-123 46-118 (142)
42 3k6s_B Integrin beta-2; cell r 98.7 1.4E-08 4.8E-13 76.2 6.2 106 3-121 449-583 (687)
43 3u7u_G Neuregulin 1; signaling 98.7 6.8E-09 2.3E-13 53.0 2.9 47 49-95 1-52 (55)
44 1nfu_B Coagulation factor XA, 98.7 1.8E-09 6E-14 69.4 0.8 71 51-124 38-111 (195)
45 1aut_L Activated protein C; se 98.7 1E-08 3.5E-13 60.5 3.9 70 55-124 5-84 (114)
46 3p5b_L Low density lipoprotein 98.7 2.8E-08 9.6E-13 70.5 5.2 66 18-87 1-70 (400)
47 2w2n_E LDL receptor, low-densi 98.7 9.4E-09 3.2E-13 59.9 2.2 73 46-123 21-97 (107)
48 2vh0_B Activated factor XA lig 98.6 4.8E-09 1.6E-13 63.6 0.8 71 51-124 38-111 (134)
49 1edm_B Factor IX; epidermal gr 98.6 8E-08 2.8E-12 45.5 4.5 37 16-53 2-38 (39)
50 2gy5_A Angiopoietin-1 receptor 98.6 1.9E-07 6.3E-12 66.8 7.6 108 3-123 188-313 (423)
51 3v65_B Low-density lipoprotein 98.5 1.3E-08 4.3E-13 71.9 0.8 67 16-86 2-73 (386)
52 3k6s_B Integrin beta-2; cell r 98.5 9.1E-08 3.1E-12 71.9 4.1 93 6-109 505-607 (687)
53 1edm_B Factor IX; epidermal gr 98.4 3.6E-07 1.2E-11 43.2 4.2 37 55-91 2-38 (39)
54 1egf_A Epidermal growth factor 98.4 5.9E-07 2E-11 45.5 5.0 40 16-56 2-46 (53)
55 3p5b_L Low density lipoprotein 98.3 7.5E-07 2.6E-11 63.2 4.5 65 58-125 2-70 (400)
56 1uzk_A Fibrillin-1; glycoprote 98.3 7.8E-08 2.7E-12 60.1 -0.6 82 3-88 27-155 (162)
57 2k2s_B Micronemal protein 6; m 98.3 2.5E-07 8.5E-12 48.1 1.3 37 16-53 10-49 (61)
58 1egf_A Epidermal growth factor 98.2 2.3E-06 7.9E-11 43.3 4.7 40 56-95 3-47 (53)
59 1a3p_A Epidermal growth factor 98.2 1.9E-06 6.4E-11 42.1 4.0 36 19-55 2-42 (45)
60 1hae_A Heregulin-alpha; growth 98.2 9.3E-07 3.2E-11 46.4 2.4 42 18-60 7-53 (63)
61 1a3p_A Epidermal growth factor 98.2 2.1E-06 7.3E-11 41.8 3.3 32 63-94 10-43 (45)
62 2gy5_A Angiopoietin-1 receptor 98.1 5.5E-06 1.9E-10 59.3 6.6 85 3-93 219-321 (423)
63 2wg3_C Hedgehog-interacting pr 98.1 3E-07 1E-11 66.5 -0.1 75 3-91 380-454 (463)
64 1hae_A Heregulin-alpha; growth 98.1 1.2E-06 4.3E-11 45.9 1.9 43 57-99 7-54 (63)
65 3v65_B Low-density lipoprotein 98.1 6.9E-07 2.4E-11 63.1 0.9 66 55-123 2-72 (386)
66 2p28_B Integrin beta-2; hybrid 98.1 2.2E-06 7.6E-11 55.9 3.2 80 3-91 110-213 (217)
67 2w86_A Fibrillin-1, fibrillin1 98.0 1.3E-07 4.6E-12 58.1 -3.0 48 38-88 88-140 (147)
68 3m0c_C LDL receptor, low-densi 98.0 1.2E-05 4.2E-10 61.7 6.2 54 68-123 324-380 (791)
69 1n7d_A LDL receptor, low-densi 98.0 1E-05 3.6E-10 61.3 5.7 67 17-87 294-364 (699)
70 1k36_A Epiregulin; EGF-like fo 98.0 7.5E-06 2.6E-10 40.0 3.3 36 16-53 2-42 (46)
71 2k2s_B Micronemal protein 6; m 98.0 1.3E-06 4.4E-11 45.4 0.4 37 55-91 10-49 (61)
72 3m0c_C LDL receptor, low-densi 97.9 1E-05 3.4E-10 62.2 4.9 55 29-87 324-382 (791)
73 1n7d_A LDL receptor, low-densi 97.9 6.4E-05 2.2E-09 57.0 8.4 67 55-124 293-363 (699)
74 1k36_A Epiregulin; EGF-like fo 97.8 1.8E-05 6.2E-10 38.7 2.8 36 56-92 3-43 (46)
75 4aqs_A Laminin subunit beta-1; 97.5 5.8E-05 2E-09 55.4 3.0 13 78-90 511-523 (525)
76 2p28_B Integrin beta-2; hybrid 97.5 7E-05 2.4E-09 48.8 3.0 85 24-121 97-205 (217)
77 1nql_B Epidermal growth factor 97.4 0.0001 3.5E-09 37.1 2.6 33 22-55 11-45 (53)
78 1nql_B Epidermal growth factor 97.2 0.00013 4.3E-09 36.7 1.7 33 61-93 11-45 (53)
79 1g1s_A P-selectin; selectin, l 97.2 0.00013 4.5E-09 45.1 2.1 40 59-99 122-161 (162)
80 1q4g_A Prostaglandin G/H synth 96.9 0.00063 2.1E-08 50.3 3.7 38 17-55 2-41 (553)
81 1g1s_A P-selectin; selectin, l 96.9 0.00029 9.9E-09 43.6 1.6 24 97-120 122-145 (162)
82 3ca7_A Protein spitz; argos, E 96.9 0.00078 2.7E-08 33.6 2.6 30 23-53 14-47 (52)
83 2jkh_L Factor X light chain; p 96.8 0.00087 3E-08 33.8 2.5 28 30-59 14-45 (55)
84 1apq_A Complement protease C1R 96.8 0.0014 4.7E-08 32.6 3.2 31 16-49 3-43 (53)
85 2jkh_L Factor X light chain; p 96.8 0.00059 2E-08 34.5 1.7 30 68-98 13-46 (55)
86 3nt1_A Prostaglandin-endoperox 96.8 0.0013 4.4E-08 48.9 4.1 37 17-54 1-39 (587)
87 3ca7_A Protein spitz; argos, E 96.7 0.00072 2.5E-08 33.7 1.8 30 62-91 14-47 (52)
88 1kli_L Factor VIIA; extrinsic 96.7 0.0014 4.8E-08 34.7 2.7 40 16-59 4-50 (69)
89 2fd6_A Urokinase-type plasmino 96.6 0.0064 2.2E-07 35.9 5.4 32 24-56 2-36 (122)
90 1gl4_A Nidogen-1, entactin; im 96.5 0.0008 2.7E-08 45.4 1.2 40 16-57 4-47 (285)
91 2wg3_C Hedgehog-interacting pr 96.4 0.00062 2.1E-08 49.3 0.5 44 3-53 411-454 (463)
92 2kl7_A Fibulin-4; secreted, ca 96.4 0.0034 1.1E-07 33.4 3.1 34 16-49 2-37 (71)
93 1kli_L Factor VIIA; extrinsic 96.3 0.002 6.9E-08 34.1 2.0 42 55-97 4-50 (69)
94 1apq_A Complement protease C1R 96.3 0.0042 1.4E-07 30.8 3.1 24 62-87 20-43 (53)
95 3ltf_D Protein spitz; receptor 96.3 0.0029 9.9E-08 32.3 2.3 30 24-54 15-48 (58)
96 3ltf_D Protein spitz; receptor 96.2 0.0017 5.7E-08 33.2 1.4 29 63-91 15-47 (58)
97 1q4g_A Prostaglandin G/H synth 96.1 0.0037 1.3E-07 46.2 3.0 37 56-92 2-40 (553)
98 1gl4_A Nidogen-1, entactin; im 96.0 0.0015 5.1E-08 44.1 0.6 41 55-96 4-48 (285)
99 2kl7_A Fibulin-4; secreted, ca 95.9 0.0071 2.4E-07 32.1 2.9 33 55-87 2-37 (71)
100 1g1t_A E-selectin; EGF, adhesi 95.8 0.0037 1.2E-07 38.3 1.7 35 59-93 122-156 (157)
101 3asi_A Neurexin-1-alpha; beta- 95.8 0.014 4.9E-07 41.4 4.9 43 12-54 180-222 (410)
102 3nt1_A Prostaglandin-endoperox 95.7 0.0068 2.3E-07 45.1 3.2 35 57-91 2-38 (587)
103 4aqs_A Laminin subunit beta-1; 95.7 0.0083 2.9E-07 44.1 3.6 75 46-121 426-516 (525)
104 2fd6_A Urokinase-type plasmino 95.7 0.025 8.6E-07 33.3 5.0 37 63-99 2-42 (122)
105 3cfw_A L-selectin; EGF, cell a 95.5 0.013 4.5E-07 36.0 3.4 38 61-99 124-161 (164)
106 1kig_L Factor XA; glycoprotein 95.4 0.0062 2.1E-07 30.1 1.5 28 69-97 11-42 (51)
107 1n1i_A Merozoite surface prote 95.4 0.054 1.9E-06 30.8 5.4 59 63-122 17-82 (105)
108 3cfw_A L-selectin; EGF, cell a 95.4 0.012 4.3E-07 36.2 3.1 27 97-123 122-148 (164)
109 3zyj_B Netrin-G1; cell adhesio 95.4 0.0061 2.1E-07 43.5 1.8 41 63-113 372-412 (426)
110 1ob1_C Major merozoite surface 95.4 0.035 1.2E-06 31.3 4.5 66 59-124 7-83 (99)
111 1n1i_A Merozoite surface prote 95.2 0.079 2.7E-06 30.1 5.7 65 20-86 13-84 (105)
112 1g1t_A E-selectin; EGF, adhesi 95.0 0.0066 2.2E-07 37.1 0.9 27 96-122 121-147 (157)
113 1kig_L Factor XA; glycoprotein 94.9 0.011 3.9E-07 29.1 1.4 28 30-59 11-42 (51)
114 1szb_A Mannose binding lectin- 94.8 0.018 6.2E-07 35.7 2.7 39 7-48 114-157 (170)
115 1ob1_C Major merozoite surface 94.7 0.055 1.9E-06 30.5 4.1 64 22-86 9-83 (99)
116 2i9a_A Urokinase-type plasmino 94.6 0.1 3.5E-06 31.7 5.5 32 24-56 14-48 (145)
117 2bz6_L Blood coagulation facto 94.5 0.017 5.6E-07 28.8 1.6 29 68-97 11-44 (53)
118 3qcw_A Neurexin-1-alpha; synap 94.3 0.053 1.8E-06 43.9 4.7 45 12-56 1012-1056(1245)
119 2bz6_L Blood coagulation facto 94.2 0.034 1.2E-06 27.6 2.4 28 30-59 12-44 (53)
120 1xdt_R Hbegf, heparin-binding 93.1 0.069 2.4E-06 28.9 2.5 29 23-53 46-76 (79)
121 3asi_A Neurexin-1-alpha; beta- 93.1 0.11 3.9E-06 36.7 4.3 38 56-93 185-223 (410)
122 1iox_A Betacellulin; EGF-like 93.0 0.07 2.4E-06 26.2 2.2 28 63-91 15-44 (50)
123 1klo_A Laminin; glycoprotein; 92.9 0.18 6.1E-06 31.1 4.5 29 24-53 2-33 (162)
124 3e50_C Protransforming growth 92.6 0.14 4.8E-06 25.1 3.0 28 63-91 15-44 (50)
125 3zyj_B Netrin-G1; cell adhesio 92.2 0.16 5.6E-06 36.3 4.0 84 29-121 304-389 (426)
126 1xdt_R Hbegf, heparin-binding 92.2 0.069 2.3E-06 28.9 1.6 30 61-91 45-76 (79)
127 3qcw_A Neurexin-1-alpha; synap 92.0 0.15 5.2E-06 41.4 4.1 44 52-95 1013-1057(1245)
128 2rnl_A Amphiregulin; AR, color 91.5 0.18 6.2E-06 24.7 2.6 27 64-91 20-48 (50)
129 2ygo_A WIF-1, WNT inhibitory f 91.3 0.21 7.2E-06 31.6 3.4 27 62-91 153-179 (188)
130 1klo_A Laminin; glycoprotein; 91.3 0.11 3.9E-06 32.0 2.2 21 69-91 125-145 (162)
131 1szb_A Mannose binding lectin- 90.8 0.068 2.3E-06 33.1 0.8 39 46-86 114-157 (170)
132 2i9a_A Urokinase-type plasmino 90.1 0.25 8.6E-06 30.0 2.9 37 63-99 14-54 (145)
133 2ygo_A WIF-1, WNT inhibitory f 90.0 0.29 9.8E-06 31.0 3.1 18 102-122 155-172 (188)
134 2wph_E Coagulation factor IXA 85.7 0.51 1.7E-05 23.8 2.0 19 68-86 11-30 (59)
135 1nzi_A Complement C1S componen 85.7 0.64 2.2E-05 28.2 2.8 18 69-86 131-148 (159)
136 3f1s_B Vitamin K-dependent pro 81.6 0.77 2.6E-05 30.7 2.1 29 17-48 2-33 (283)
137 3v64_C Agrin; beta propeller, 79.8 0.92 3.1E-05 31.3 2.0 32 18-52 2-38 (349)
138 3v64_C Agrin; beta propeller, 78.2 0.89 3E-05 31.3 1.6 20 67-86 11-30 (349)
139 1b9w_A Protein (merozoite surf 72.4 7.8 0.00027 21.5 4.0 64 59-122 7-77 (95)
140 3f1s_B Vitamin K-dependent pro 71.9 2.2 7.4E-05 28.5 2.2 30 57-86 3-33 (283)
141 2e26_A Reelin, reeler protein; 62.4 2.4 8.1E-05 32.6 0.9 44 3-53 521-564 (725)
142 3t5o_A Complement component C6 55.5 40 0.0014 26.8 6.7 37 18-55 498-534 (913)
143 3sov_A LRP-6, low-density lipo 54.8 17 0.00059 24.6 4.1 20 67-86 278-299 (318)
144 3t5o_A Complement component C6 52.9 22 0.00077 28.1 4.9 35 59-93 500-534 (913)
145 1ijq_A LDL receptor, low-densi 52.9 16 0.00053 24.6 3.7 7 37-43 296-302 (316)
146 4a0p_A LRP6, LRP-6, low-densit 45.9 14 0.0005 27.7 2.8 34 16-52 264-304 (628)
147 2e26_A Reelin, reeler protein; 44.0 3 0.0001 32.0 -1.1 44 41-91 521-564 (725)
148 4a0p_A LRP6, LRP-6, low-densit 43.9 14 0.00047 27.9 2.4 32 55-86 264-296 (628)
149 2p26_A Integrin beta-2; hybrid 39.9 23 0.00079 23.9 2.8 12 3-14 210-221 (280)
150 3s94_A LRP-6, low-density lipo 37.0 18 0.00062 27.1 2.2 18 68-85 590-607 (619)
151 4aqt_A Laminin subunit gamma-1 32.8 8.8 0.0003 27.1 -0.1 17 36-53 270-286 (375)
152 3s94_A LRP-6, low-density lipo 31.8 22 0.00076 26.7 1.9 20 105-124 589-608 (619)
153 3fby_A COMP, cartilage oligome 31.3 34 0.0012 25.5 2.7 26 23-49 27-53 (551)
154 1q2j_A MU-conotoxin SMIIIA; HE 23.2 50 0.0017 13.3 1.7 15 94-108 7-21 (26)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.82 E-value=1.7e-19 Score=110.27 Aligned_cols=107 Identities=39% Similarity=1.021 Sum_probs=97.3
Q ss_pred ccCCCC--CCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCC
Q psy9687 16 NIDDCE--SGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADD 93 (141)
Q Consensus 16 ~~~~c~--~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~ 93 (141)
++++|. ..||.+++.|.+..++|.|.|.+ ||.|..|+.++++|...+|..++.|++..+.|.|.|++||.|..|+.+
T Consensus 4 dideC~~~~~~C~~~g~C~~~~g~~~C~C~~-Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~ 82 (135)
T 2vj3_A 4 DVDECSLGANPCEHAGKCINTLGSFECQCLQ-GYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 82 (135)
T ss_dssp CCCTTTSSSCSSSTTCEEEECSSSEEEECCT-TEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred ccccccCCCCCCCCCCEeECCCCCEEEECCC-CCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceec
Confidence 789998 67899999999999999999995 999999976788999889999999999999999999999999999778
Q ss_pred CCCCcCCCCCCCCEEeecCCCcceecCCCC
Q psy9687 94 IKECESNPCQYGGTCLEHSNMSLYQRSDLP 123 (141)
Q Consensus 94 ~~~c~~~~c~~~~~C~~~~~~~~~~~~~~~ 123 (141)
+++|...+|.++++|++..+.+.|.|...+
T Consensus 83 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~ 112 (135)
T 2vj3_A 83 TDECASSPCLHNGRCLDKINEFQCECPTGF 112 (135)
T ss_dssp CCTTTTCCSTTTCEEEECSSCEEEECCTTE
T ss_pred CCcccCCCcCCCCEeECCCCCeEEECCCCC
Confidence 999999999999999999999999886443
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.75 E-value=4.9e-18 Score=104.75 Aligned_cols=106 Identities=37% Similarity=0.951 Sum_probs=87.7
Q ss_pred CCCCCCCCCCCCEEeecC--CceeEecCCCCccCCCCCc------------CCCcCcCCCCCCCCEEe-------eCCCC
Q psy9687 18 DDCESGPCLNGGLCKDLL--NNYTCNCQQTGYTGPHCEI------------NIDDCAPNPCKNGARCV-------DKVKD 76 (141)
Q Consensus 18 ~~c~~~~c~~~~~C~~~~--g~~~c~c~~~g~~g~~c~~------------~~~~c~~~~c~~~~~c~-------~~~~~ 76 (141)
|+|...||.++++|++.. ++|+|.|.+ ||+|..|+. +++.|...+|.+++.|+ ++.+.
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~-G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~ 79 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPD-GFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIG 79 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCT-TCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECC
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCC-CCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCC
Confidence 468888999999999865 679999995 999998864 34567778899999998 56678
Q ss_pred eeecCCCCCCCCCCCCCCCCCcCCCCCCCCEEeecCCCcceecCCCCC
Q psy9687 77 YLCECYPGYTGKTCADDIKECESNPCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 77 ~~c~C~~g~~~~~c~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
|.|.|++||.|..|+.++++|...+|.++++|++..++|.|.|...+.
T Consensus 80 ~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 80 YVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp EEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCB
T ss_pred eEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCc
Confidence 999999999999997799999999999999999999999998875544
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.75 E-value=5.5e-18 Score=103.58 Aligned_cols=97 Identities=36% Similarity=0.909 Sum_probs=85.1
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCC
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECY 82 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~ 82 (141)
.|.++|+|..|+.++++|...+|.+++.|.+..++|.|.|.+ ||.|..|+.++++|...+|..++.|++..+.|.|.|+
T Consensus 31 ~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~-G~~G~~C~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~ 109 (135)
T 2vj3_A 31 QCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMP-GYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECP 109 (135)
T ss_dssp ECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCT-TEESSSSCEECCTTTTCCSTTTCEEEECSSCEEEECC
T ss_pred ECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCC-CCcCCcceecCCcccCCCcCCCCEeECCCCCeEEECC
Confidence 478999999998889999999999999999999999999994 9999999767889988899999999999999999999
Q ss_pred CCCCCCCCCCCCCCCcCC
Q psy9687 83 PGYTGKTCADDIKECESN 100 (141)
Q Consensus 83 ~g~~~~~c~~~~~~c~~~ 100 (141)
+||.|..|+.++++|...
T Consensus 110 ~G~~G~~C~~~i~~C~~~ 127 (135)
T 2vj3_A 110 TGFTGHLCQVDLHHILDA 127 (135)
T ss_dssp TTEESSSSCEECC-----
T ss_pred CCCcCCccCccCccccCC
Confidence 999999998789998764
No 4
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.65 E-value=2.5e-17 Score=105.79 Aligned_cols=119 Identities=21% Similarity=0.444 Sum_probs=98.4
Q ss_pred eeccCCccc---ccccccCCCC----CCCCCCCCEEeecC-----CceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEE
Q psy9687 3 VLWSQNGLR---LCETNIDDCE----SGPCLNGGLCKDLL-----NNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARC 70 (141)
Q Consensus 3 ~~~~~~~g~---~C~~~~~~c~----~~~c~~~~~C~~~~-----g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c 70 (141)
.|.++|.|. .|+ ++++|. ..+|.+++.|.+.. ++|.|.|.+ ||.|..+.-.+++|...+|.+++.|
T Consensus 28 ~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~-G~~g~~~~C~~d~C~~~~C~~~g~C 105 (186)
T 1z1y_A 28 MCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIE-GYTLXEDTCVLDVCQYXNCGESGEC 105 (186)
T ss_dssp EECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECT-TEEEETTEEEEGGGTTCCCCTTEEE
T ss_pred ECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCC-CCccCCCCCCCCcCcCCCCCCCCEE
Confidence 378899877 897 889998 67899999999998 899999995 9998744324688988889989999
Q ss_pred e----eCCCCeeecCCCCCCC-----CCCCCC-CCCCcCCCC-CCCCEEeecCCCcceecCCCCC
Q psy9687 71 V----DKVKDYLCECYPGYTG-----KTCADD-IKECESNPC-QYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 71 ~----~~~~~~~c~C~~g~~~-----~~c~~~-~~~c~~~~c-~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
+ +..+.|.|.|++||.+ ..|... +++|. .+| .+++.|++..++|.|.|...+.
T Consensus 106 ~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~ 169 (186)
T 1z1y_A 106 IVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFT 169 (186)
T ss_dssp EEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEEETTEEEEEECTTCE
T ss_pred eeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceecCCCCeeeECCCCCc
Confidence 8 7778899999999987 667532 47887 489 8999999999999999976554
No 5
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.62 E-value=2.7e-15 Score=92.39 Aligned_cols=88 Identities=38% Similarity=0.925 Sum_probs=77.5
Q ss_pred eeccCCccccccc------------ccCCCCCCCCCCCCEEe-------ecCCceeEecCCCCccCCCCCcCCCcCcCCC
Q psy9687 3 VLWSQNGLRLCET------------NIDDCESGPCLNGGLCK-------DLLNNYTCNCQQTGYTGPHCEINIDDCAPNP 63 (141)
Q Consensus 3 ~~~~~~~g~~C~~------------~~~~c~~~~c~~~~~C~-------~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~ 63 (141)
.|.++|+|..|+. ++++|...+|.+++.|. ++.++|.|.|.+ ||.|..|+.++++|...+
T Consensus 26 ~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~-G~~G~~C~~~i~~C~~~~ 104 (143)
T 4d90_A 26 ECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPR-GFNGIHCQHNINECEVEP 104 (143)
T ss_dssp ECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCT-TEESTTSCEECCTTTTCC
T ss_pred ECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcC-CCcCCCcccCCCcCCCCC
Confidence 3778999999974 45778888999999998 566789999995 999999976889999889
Q ss_pred CCCCCEEeeCCCCeeecCCCCCCCCCCC
Q psy9687 64 CKNGARCVDKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 64 c~~~~~c~~~~~~~~c~C~~g~~~~~c~ 91 (141)
|..++.|++..+.|.|.|++||.|+.+.
T Consensus 105 C~~~~~C~~~~g~~~C~C~~G~~G~~c~ 132 (143)
T 4d90_A 105 CKNGGICTDLVANYSCECPGEFMGRNCQ 132 (143)
T ss_dssp SCTTCEEEEETTEEEEECCTTCBSTTSC
T ss_pred CCCCCEeECCCCCeEeECCCCCccCCce
Confidence 9999999999999999999999998775
No 6
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.58 E-value=5.4e-15 Score=109.28 Aligned_cols=106 Identities=29% Similarity=0.753 Sum_probs=89.0
Q ss_pred ccCCCCCCCCCCCCEEeecCC-ceeE-ecCCCCccC--CCCCcCCCcCcCCC--CCCCC---EEeeCCCCeeec-CCCCC
Q psy9687 16 NIDDCESGPCLNGGLCKDLLN-NYTC-NCQQTGYTG--PHCEINIDDCAPNP--CKNGA---RCVDKVKDYLCE-CYPGY 85 (141)
Q Consensus 16 ~~~~c~~~~c~~~~~C~~~~g-~~~c-~c~~~g~~g--~~c~~~~~~c~~~~--c~~~~---~c~~~~~~~~c~-C~~g~ 85 (141)
++++|...||.+++.|.+..+ +|.| .|.+ ||+| ..|+ ++++|...+ |..++ .|+++.++|.|. |++||
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~-GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy 79 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPV-GFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRY 79 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCT-TBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCC-ccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCCCc
Confidence 678898899999999999875 5999 9994 9997 7895 889998777 98888 899999999998 99999
Q ss_pred CCCCCC--------------CCCCCCcC--CCCCCCCEEeecC----CCcceecCCCC
Q psy9687 86 TGKTCA--------------DDIKECES--NPCQYGGTCLEHS----NMSLYQRSDLP 123 (141)
Q Consensus 86 ~~~~c~--------------~~~~~c~~--~~c~~~~~C~~~~----~~~~~~~~~~~ 123 (141)
.|..+. .++++|.. .+|+++++|++.. ++|.|.|...+
T Consensus 80 ~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy 137 (634)
T 1yo8_A 80 RGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGY 137 (634)
T ss_dssp EECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTE
T ss_pred ccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCc
Confidence 876542 47889986 4899999999998 89999886544
No 7
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.46 E-value=4.2e-14 Score=87.07 Aligned_cols=97 Identities=26% Similarity=0.645 Sum_probs=80.2
Q ss_pred CCCCCCCEEeecCCceeEecCCCCccC---------CCCCcCCCcCcCC---CCCCCCEEeeCCCCeeecCCCCCCCC--
Q psy9687 23 GPCLNGGLCKDLLNNYTCNCQQTGYTG---------PHCEINIDDCAPN---PCKNGARCVDKVKDYLCECYPGYTGK-- 88 (141)
Q Consensus 23 ~~c~~~~~C~~~~g~~~c~c~~~g~~g---------~~c~~~~~~c~~~---~c~~~~~c~~~~~~~~c~C~~g~~~~-- 88 (141)
.+|.+++.|.+. |.|.|.+ ||+| ..|+ ++++|... +|..++.|+++.++|.|.|++||.+.
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~-G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNP-GFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp TTCCTTEEESSS---SCEEECT-TEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred CcCCCCCEEcCC---CEEeCCC-CCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 568888999874 8999995 9987 5774 78899864 79888999999999999999999765
Q ss_pred ----------CCCCCCCCCcC--CCCCCCCEEeecCCCcceecCCCCCC
Q psy9687 89 ----------TCADDIKECES--NPCQYGGTCLEHSNMSLYQRSDLPAL 125 (141)
Q Consensus 89 ----------~c~~~~~~c~~--~~c~~~~~C~~~~~~~~~~~~~~~~~ 125 (141)
.| .++++|.. .+|.+++.|++..++|.|.|...+..
T Consensus 82 ~~~~~~~~~~~C-~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g 129 (143)
T 2bou_A 82 AKTFKNESENTC-QDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKP 129 (143)
T ss_dssp CSCBSSGGGCCE-EECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCB
T ss_pred ccccccCCCCCc-CCccCccCcCCCCCCCCEEECCCCCEEeeCCCCccc
Confidence 45 37888975 68999999999999999998765543
No 8
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.42 E-value=1.5e-14 Score=92.82 Aligned_cols=100 Identities=22% Similarity=0.517 Sum_probs=82.8
Q ss_pred CCCCCCCCCEEeecCCceeEecCCCCccCC---CCCcCCCcCc----CCCCCCCCEEeeCC-----CCeeecCCCCCCCC
Q psy9687 21 ESGPCLNGGLCKDLLNNYTCNCQQTGYTGP---HCEINIDDCA----PNPCKNGARCVDKV-----KDYLCECYPGYTGK 88 (141)
Q Consensus 21 ~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~---~c~~~~~~c~----~~~c~~~~~c~~~~-----~~~~c~C~~g~~~~ 88 (141)
...||.++ +|.+..++|+|.|.+ ||.|. .|+ ++++|. ..+|..++.|++.. ++|.|.|++||.+.
T Consensus 9 ~~~pC~ng-~C~~~~g~~~C~C~~-G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~ 85 (186)
T 1z1y_A 9 VDTICXNG-QLVQMSNHFXCMCNE-GLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX 85 (186)
T ss_dssp TTCCCBTE-EEEECSSCEEEEECT-TEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE
T ss_pred CCCCCCCC-EeECCCCCeEeECCC-CCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC
Confidence 45678865 999999999999995 99876 785 788998 67798889999998 89999999999876
Q ss_pred CCCCCCCCCcCCCCCCCCEEe----ecCCCcceecCCCC
Q psy9687 89 TCADDIKECESNPCQYGGTCL----EHSNMSLYQRSDLP 123 (141)
Q Consensus 89 ~c~~~~~~c~~~~c~~~~~C~----~~~~~~~~~~~~~~ 123 (141)
.+.-.+++|...+|.+++.|+ +..+++.|.|...+
T Consensus 86 ~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy 124 (186)
T 1z1y_A 86 EDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGX 124 (186)
T ss_dssp TTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEE
T ss_pred CCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCC
Confidence 443347899988999999998 67778888886544
No 9
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.42 E-value=3.1e-13 Score=76.90 Aligned_cols=83 Identities=23% Similarity=0.607 Sum_probs=67.7
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCC-cCCCcCcCCCCCCCCEEeeCC--CCeee
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCE-INIDDCAPNPCKNGARCVDKV--KDYLC 79 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~-~~~~~c~~~~c~~~~~c~~~~--~~~~c 79 (141)
.|.++|+|..| ++++|...||. +..+.|.|.|.+ ||. .|+ .++++|...||.+++.|++.. +.|.|
T Consensus 5 ~C~~g~~g~~c--~~~~c~~~pC~------n~~~~y~C~C~~-G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C 73 (91)
T 1tpg_A 5 ICRDEKTQMIY--QQHQSWLRPVL------RSNRVEYCWCNS-GRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVC 73 (91)
T ss_dssp CCBCSSSCCBC--CSSCEEEEECS------SSSCEEEEECSS-SCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEE
T ss_pred ECCCCCcCCeE--CCCcccCCccc------cCCCCcEeECCC-CCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEe
Confidence 57899999998 46777666554 456789999994 997 785 467889889999999999877 88999
Q ss_pred cCCCCCCCCCCCCCCCC
Q psy9687 80 ECYPGYTGKTCADDIKE 96 (141)
Q Consensus 80 ~C~~g~~~~~c~~~~~~ 96 (141)
.|++||.|..|+.++++
T Consensus 74 ~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 74 QCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp ECCTTCBSSSCCBCSSC
T ss_pred ECCCCCcCCcCCcCCCC
Confidence 99999999999766654
No 10
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.40 E-value=4e-13 Score=82.64 Aligned_cols=84 Identities=25% Similarity=0.718 Sum_probs=70.4
Q ss_pred eeccCCcc---------cccccccCCCCCC---CCCCCCEEeecCCceeEecCCCCccCC------------CCCcCCCc
Q psy9687 3 VLWSQNGL---------RLCETNIDDCESG---PCLNGGLCKDLLNNYTCNCQQTGYTGP------------HCEINIDD 58 (141)
Q Consensus 3 ~~~~~~~g---------~~C~~~~~~c~~~---~c~~~~~C~~~~g~~~c~c~~~g~~g~------------~c~~~~~~ 58 (141)
.|.++|+| +.|+ ++++|... +|.+++.|+++.++|.|.|.+ ||.+. .|+ ++++
T Consensus 22 ~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~-Gy~g~~~~~~~~~~~~~~C~-dide 98 (143)
T 2bou_A 22 RCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCWNTEGSYDCVCSP-GYEPVSGAKTFKNESENTCQ-DVDE 98 (143)
T ss_dssp EECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEEECSSCEEEEECT-TEEETTCCSCBSSGGGCCEE-ECCH
T ss_pred eCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEEcCCCCeEeECCC-CcccCcCccccccCCCCCcC-CccC
Confidence 46788876 6886 89999875 799889999999999999994 99875 563 7788
Q ss_pred Cc--CCCCCCCCEEeeCCCCeeecCCCCCCCCC
Q psy9687 59 CA--PNPCKNGARCVDKVKDYLCECYPGYTGKT 89 (141)
Q Consensus 59 c~--~~~c~~~~~c~~~~~~~~c~C~~g~~~~~ 89 (141)
|. ..+|..++.|+++.++|.|.|++||.+..
T Consensus 99 C~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~ 131 (143)
T 2bou_A 99 CSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH 131 (143)
T ss_dssp HHHTCCCCCTTSEEEECSSCEEEECCSSSCBCT
T ss_pred ccCcCCCCCCCCEEECCCCCEEeeCCCCcccCC
Confidence 87 36798889999999999999999998754
No 11
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.39 E-value=1.6e-13 Score=81.81 Aligned_cols=98 Identities=30% Similarity=0.637 Sum_probs=78.0
Q ss_pred ccCCCCCCCCCCCCEEeec-CCceeEecCCCCccCCCCCcCCCcC----cCCCCCCCCEEeeCCCCeeecCCCCCC---C
Q psy9687 16 NIDDCESGPCLNGGLCKDL-LNNYTCNCQQTGYTGPHCEINIDDC----APNPCKNGARCVDKVKDYLCECYPGYT---G 87 (141)
Q Consensus 16 ~~~~c~~~~c~~~~~C~~~-~g~~~c~c~~~g~~g~~c~~~~~~c----~~~~c~~~~~c~~~~~~~~c~C~~g~~---~ 87 (141)
++++|...||.+ .|+++ .++|.|.|.+ ||.|... ++++| ...+|. +.|.+ .+.|.|.|++||. +
T Consensus 3 dideC~~~pC~~--~C~~~~~g~y~C~C~~-Gy~g~~~--~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g 74 (118)
T 1dx5_I 3 PVDPCFRANCEY--QCQPLDQTSYLCVCAE-GFAPIPH--EPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDG 74 (118)
T ss_dssp CCCGGGGCCCSS--EEEECSSSCEEEECCT-TEEEETT--EEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETT
T ss_pred ccccCCCCCCCC--CCCCCCCCCEEeECCC-CccccCC--CCCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCC
Confidence 688998889975 99999 8999999995 9987743 23333 334443 57877 5889999999998 7
Q ss_pred CCCCCCCCCCcC-CCCCCCCEEeecCCCcceecCCCCC
Q psy9687 88 KTCADDIKECES-NPCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 88 ~~c~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
..| .++++|.. ++| ++.|++..++|.|.|...+.
T Consensus 75 ~~C-~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~ 109 (118)
T 1dx5_I 75 FIC-TDIDECENGGFC--SGVCHNLPGTFECICGPDSA 109 (118)
T ss_dssp TEE-EECCHHHHCSSC--SSEEEECSSSEEEEECSSSS
T ss_pred Ccc-ccccccCCCCCC--cCeEEeCCCCEEEECCCCCc
Confidence 788 58999987 788 78999999999999976543
No 12
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.32 E-value=6.4e-12 Score=93.07 Aligned_cols=95 Identities=25% Similarity=0.582 Sum_probs=79.4
Q ss_pred eeccCCcc--cccccccCCCCCCC--CCCCC---EEeecCCceeEe-cCCCCccCCCCC--------------cCCCcCc
Q psy9687 3 VLWSQNGL--RLCETNIDDCESGP--CLNGG---LCKDLLNNYTCN-CQQTGYTGPHCE--------------INIDDCA 60 (141)
Q Consensus 3 ~~~~~~~g--~~C~~~~~~c~~~~--c~~~~---~C~~~~g~~~c~-c~~~g~~g~~c~--------------~~~~~c~ 60 (141)
.|.++|+| +.|+ ++++|...+ |.+++ .|.++.++|.|. |.+ ||.|..|. .++++|.
T Consensus 29 ~C~~GytGdg~~Ce-DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~-Gy~G~~c~g~g~~~~~~dg~~C~dideC~ 106 (634)
T 1yo8_A 29 FCPVGFLGNGTHCE-DLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPP-RYRGNQPVGVGLEAAKTEKQVCEPENPCK 106 (634)
T ss_dssp CCCTTBCSCSSSCC-BCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCT-TEEECCCEESSSHHHHSCCCCEEECCTTT
T ss_pred cCCCccCCCCCCcc-ccccccCCCCcccCCccccceeeccCceecccCCC-CcccCccccccccccccCCCccccccccc
Confidence 57899988 8997 899999887 99988 999999999998 994 99877642 3678887
Q ss_pred C--CCCCCCCEEeeCC----CCeeecCCCCCCC--CCCCC--CCCCCcC
Q psy9687 61 P--NPCKNGARCVDKV----KDYLCECYPGYTG--KTCAD--DIKECES 99 (141)
Q Consensus 61 ~--~~c~~~~~c~~~~----~~~~c~C~~g~~~--~~c~~--~~~~c~~ 99 (141)
. .+|..++.|+++. ++|.|.|++||.+ ..|.. ++++|..
T Consensus 107 ~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~~ 155 (634)
T 1yo8_A 107 DKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPN 155 (634)
T ss_dssp TTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSCS
T ss_pred CCCcccccCccccccccccccceeeeccCCccccCcccccccCcccccC
Confidence 4 5899899999988 8999999999986 67753 6778854
No 13
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.32 E-value=3.2e-12 Score=75.67 Aligned_cols=90 Identities=27% Similarity=0.650 Sum_probs=61.4
Q ss_pred ccCCCCCCC--------CCCCCEEeecCCceeEecCCCCccCCCCCcCC--CcCcCCCCCCCCEEeeCCCCeeecCCCCC
Q psy9687 16 NIDDCESGP--------CLNGGLCKDLLNNYTCNCQQTGYTGPHCEINI--DDCAPNPCKNGARCVDKVKDYLCECYPGY 85 (141)
Q Consensus 16 ~~~~c~~~~--------c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~--~~c~~~~c~~~~~c~~~~~~~~c~C~~g~ 85 (141)
++++|...| |.++++|.++.++|.|.|.+ ||.|..|+..+ ++|..........|+++.++|.|.|++||
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~-G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~ 83 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRS-GWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGY 83 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECT-TEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTE
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCC-CCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCe
Confidence 677888888 88999999999999999995 99999996332 35753322222389999999999999999
Q ss_pred CC----CCCCCCCCCCcCCCCCCCCEEee
Q psy9687 86 TG----KTCADDIKECESNPCQYGGTCLE 110 (141)
Q Consensus 86 ~~----~~c~~~~~~c~~~~c~~~~~C~~ 110 (141)
.+ ..|. + ....+|...+.|+.
T Consensus 84 ~~~~~g~~C~-~---~~~~pC~~~~~~i~ 108 (114)
T 1aut_L 84 KLGDDLLQCH-P---AVKFPCGRPWKRME 108 (114)
T ss_dssp EECTTSSCEE-E---CSSSCTTCCC----
T ss_pred eECCCCCccC-c---CcccCCCCCCccCC
Confidence 74 3342 2 22346777666653
No 14
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.31 E-value=4.1e-12 Score=70.86 Aligned_cols=69 Identities=32% Similarity=0.936 Sum_probs=59.3
Q ss_pred ccCCCCC-CCCCCCCEEeecCCceeEecCCCCcc--CCCCCcCCCcCc-CCCCCCCCEEeeCCCCeeecCCCCCCCC
Q psy9687 16 NIDDCES-GPCLNGGLCKDLLNNYTCNCQQTGYT--GPHCEINIDDCA-PNPCKNGARCVDKVKDYLCECYPGYTGK 88 (141)
Q Consensus 16 ~~~~c~~-~~c~~~~~C~~~~g~~~c~c~~~g~~--g~~c~~~~~~c~-~~~c~~~~~c~~~~~~~~c~C~~g~~~~ 88 (141)
++++|.. .+|.+ +.|+++.++|.|.|.+ ||. |..|+ ++++|. ..+|.+ +.|+++.++|.|.|++||.+.
T Consensus 4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~-Gy~~~g~~C~-dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINTDGSYRCECPF-GYILAGNECV-DTDECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCCSSCCCEECCT-TEEEETTEEE-ECCGGGTCCTTSS-SCEEECSSSEEECCSSSSCCC
T ss_pred ccccCCCCCCcCC-CEEEecCCCEEEECCC-CeECCCCccC-CcccccCCCCCCC-CEeECCCCCEEeECCCCeEeC
Confidence 7899985 78875 7999999999999995 997 88894 889997 677875 589999999999999999764
No 15
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.31 E-value=2.7e-12 Score=79.15 Aligned_cols=77 Identities=40% Similarity=0.876 Sum_probs=59.0
Q ss_pred ccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEE-eeCCCCeeecCCCCCC----
Q psy9687 12 LCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARC-VDKVKDYLCECYPGYT---- 86 (141)
Q Consensus 12 ~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c-~~~~~~~~c~C~~g~~---- 86 (141)
.|. ++++|...||.+++.|.+..++|.|.|.+ ||+|..|+ ++++|...+......| +++.++|.|.|++||.
T Consensus 44 ~c~-dideC~~~pC~n~g~C~~~~~~y~C~C~~-G~~G~~C~-~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~d 120 (146)
T 1x7a_L 44 QYV-DGDQCEPNPCLNGGLCKDDINSYECWCQV-GFEGKNCE-LDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPD 120 (146)
T ss_dssp -------CCSSCSSCTTCEEEECSSCEEEECCS-SEESTTTC-EECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTT
T ss_pred cCC-CcCcCCCCCCCCCCEeECCCCCEEEecCC-CCcCCcCC-CCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCC
Confidence 464 78999999999999999999999999994 99999996 5688875432222389 8899999999999997
Q ss_pred CCCCC
Q psy9687 87 GKTCA 91 (141)
Q Consensus 87 ~~~c~ 91 (141)
|..|.
T Consensus 121 G~~C~ 125 (146)
T 1x7a_L 121 QKSCK 125 (146)
T ss_dssp SSSEE
T ss_pred CCcCC
Confidence 56663
No 16
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.29 E-value=1.9e-12 Score=73.01 Aligned_cols=77 Identities=38% Similarity=0.970 Sum_probs=62.0
Q ss_pred ccCCCCCCC--CCCCCEEeecCCceeEecCCCCcc----CCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCC
Q psy9687 16 NIDDCESGP--CLNGGLCKDLLNNYTCNCQQTGYT----GPHCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKT 89 (141)
Q Consensus 16 ~~~~c~~~~--c~~~~~C~~~~g~~~c~c~~~g~~----g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~ 89 (141)
++++|...| | +++.|.++.++|.|.|.+ ||. |+.|+ ++++|...+|. +.|+++.++|.|.|+ ++.|..
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~-G~~~~~~g~~C~-dideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~ 75 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPE-GYRYNLKSKSCE-DIDECSENMCA--QLCVNYPGGYTCYCD-GKKGFK 75 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSST-TCEEETTTTEEE-CCCHHHHSCCS--SEECCCSSSCCEECC-SSSCCB
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCC-CceECCCCCcCC-CcCeeCCCCCC--CEEEccCCCEEEECC-CCcCCc
Confidence 678898777 8 678999999999999994 998 77885 88999877886 689999999999997 666655
Q ss_pred CCCCCCCCc
Q psy9687 90 CADDIKECE 98 (141)
Q Consensus 90 c~~~~~~c~ 98 (141)
+..+...|.
T Consensus 76 ~~~~~~~C~ 84 (87)
T 1z6c_A 76 LAQDQKSCE 84 (87)
T ss_dssp CCTTSSSCB
T ss_pred ccCCCCcce
Confidence 555555553
No 17
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.27 E-value=9e-12 Score=76.50 Aligned_cols=75 Identities=40% Similarity=0.884 Sum_probs=60.6
Q ss_pred ccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCC---EEeeCCC-CeeecCCCCCC----C
Q psy9687 16 NIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGA---RCVDKVK-DYLCECYPGYT----G 87 (141)
Q Consensus 16 ~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~---~c~~~~~-~~~c~C~~g~~----~ 87 (141)
++++|..+||.+++.|.+..++|.|.|.+ ||+|+.|+.+++.|..-++.+++ .|+++.+ +|.|.|++||. |
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~-G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG 124 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLP-AFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADG 124 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCT-TEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTS
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCC-CccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCC
Confidence 78899999999999999999999999995 99999997445554333333333 8999999 99999999997 6
Q ss_pred CCCC
Q psy9687 88 KTCA 91 (141)
Q Consensus 88 ~~c~ 91 (141)
..|.
T Consensus 125 ~~C~ 128 (142)
T 2c4f_L 125 VSCT 128 (142)
T ss_dssp SCEE
T ss_pred CCCC
Confidence 6664
No 18
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.23 E-value=2.2e-12 Score=82.86 Aligned_cols=76 Identities=39% Similarity=0.967 Sum_probs=26.6
Q ss_pred ccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCC-CcCcCC--CCCCCCEEeeCCCCeeecCCCCCC--
Q psy9687 12 LCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINI-DDCAPN--PCKNGARCVDKVKDYLCECYPGYT-- 86 (141)
Q Consensus 12 ~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~-~~c~~~--~c~~~~~c~~~~~~~~c~C~~g~~-- 86 (141)
.|. ++++|...||.+++.|.+..++|.|.|.+ ||.|..|+..+ ++|... +|.. .|.+..++|.|.|++||.
T Consensus 38 ~c~-dideC~~~pC~ngg~C~n~~g~y~C~C~~-Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~ 113 (195)
T 1nfu_B 38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLE-GFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLA 113 (195)
T ss_dssp ---------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEEC
T ss_pred cCC-CCcccCCCCCCCCCEeECCCCCeeEeCCC-CceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeC
Confidence 464 88999999999999999999999999995 99999997556 778754 4543 899999999999999998
Q ss_pred --CCCCC
Q psy9687 87 --GKTCA 91 (141)
Q Consensus 87 --~~~c~ 91 (141)
|..|.
T Consensus 114 ~dG~~C~ 120 (195)
T 1nfu_B 114 DNGKACI 120 (195)
T ss_dssp TTSSCEE
T ss_pred CCCCccc
Confidence 77774
No 19
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.22 E-value=8.9e-12 Score=70.12 Aligned_cols=69 Identities=36% Similarity=0.997 Sum_probs=57.2
Q ss_pred ccCCCCCCC--CCCCCEEeecCCceeEecCCCCcc-----CCCCCcCCCcCcCCC--CCCCCEEeeCCCCeeecCCCCCC
Q psy9687 16 NIDDCESGP--CLNGGLCKDLLNNYTCNCQQTGYT-----GPHCEINIDDCAPNP--CKNGARCVDKVKDYLCECYPGYT 86 (141)
Q Consensus 16 ~~~~c~~~~--c~~~~~C~~~~g~~~c~c~~~g~~-----g~~c~~~~~~c~~~~--c~~~~~c~~~~~~~~c~C~~g~~ 86 (141)
++++|...+ |.+ +.|.++.++|.|.|.+ ||. |..|+ ++++|...+ |. ++.|+++.++|.|.|++||.
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~-Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~ 77 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDE-GYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ 77 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCS-SEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCC-CcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcc
Confidence 678898765 865 4999999999999995 997 67885 889997655 54 57999999999999999997
Q ss_pred CC
Q psy9687 87 GK 88 (141)
Q Consensus 87 ~~ 88 (141)
+.
T Consensus 78 ~~ 79 (86)
T 1lmj_A 78 LS 79 (86)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 20
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.19 E-value=3.1e-12 Score=80.26 Aligned_cols=106 Identities=22% Similarity=0.558 Sum_probs=71.7
Q ss_pred ccCCCC-CCCCCCCCEEeecCCceeEecCCCCcc----CCCCCcCCCc--CcCC--CC--CCCCEEeeCCC----Ceeec
Q psy9687 16 NIDDCE-SGPCLNGGLCKDLLNNYTCNCQQTGYT----GPHCEINIDD--CAPN--PC--KNGARCVDKVK----DYLCE 80 (141)
Q Consensus 16 ~~~~c~-~~~c~~~~~C~~~~g~~~c~c~~~g~~----g~~c~~~~~~--c~~~--~c--~~~~~c~~~~~----~~~c~ 80 (141)
++++|. ..||. ++.|.++.++|.|.|.+ ||. |+.|+ ++++ |... ++ ..++.|.+..+ .|.|.
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~-Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~ 78 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPP-DFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCC 78 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCT-TCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHH
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCC-CCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceee
Confidence 688897 47896 68999999999999995 997 78885 6665 6532 22 23556766554 45666
Q ss_pred CCCCCC---------------------------CC---CCCCCCCCCcCC--CCCCCCEEeecCCCcceecCCCCCC
Q psy9687 81 CYPGYT---------------------------GK---TCADDIKECESN--PCQYGGTCLEHSNMSLYQRSDLPAL 125 (141)
Q Consensus 81 C~~g~~---------------------------~~---~c~~~~~~c~~~--~c~~~~~C~~~~~~~~~~~~~~~~~ 125 (141)
|++||. +. .+..++++|... +|.+ +.|++..++|.|.|...+..
T Consensus 79 C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g 154 (162)
T 1uzk_A 79 CSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYL 154 (162)
T ss_dssp TTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCB
T ss_pred CCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccC
Confidence 665543 22 122588999754 5885 69999999999999765543
No 21
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.17 E-value=1.5e-11 Score=77.56 Aligned_cols=106 Identities=27% Similarity=0.661 Sum_probs=78.1
Q ss_pred eeccCCcccccccccCCCCCCCCC-CCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCC-CCCCCEEeeCCCCeeec
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCL-NGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNP-CKNGARCVDKVKDYLCE 80 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~-~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~-c~~~~~c~~~~~~~~c~ 80 (141)
.|.++|+|..|+. +.|.. .|. .++.|.+ .+.|.|.+ +|.|..|+ +|...+ |.+ +.|+ +.+.|.
T Consensus 53 ~C~~G~~G~~C~~--~~C~~-~C~~~~g~C~~---~~~C~C~~-G~~G~~C~----~C~~~~~C~~-g~C~---~~~~C~ 117 (169)
T 2vj2_A 53 TCMEGWMGPECNR--AICRQ-GCSPKHGSCKL---PGDCRCQY-GWQGLYCD----KCIPHPGCVH-GICN---EPWQCL 117 (169)
T ss_dssp EECTTEESTTSCE--ECCCT-TCCTTTEECSS---TTCCEECT-TEESSSSC----EECCCTTCSS-EECS---STTCCE
T ss_pred ECCCCCcCCCCCC--CCCCC-CCCCCCcccCC---CCeeECCC-CCCCCCcc----cCCCCCCCCC-CCcC---CCCEEe
Confidence 4788888888853 34543 354 4456754 46899984 99998884 244444 553 3775 567899
Q ss_pred CCCCCCCCCCCCCCCCCcC-CCCCCCCEEeec-CCCcceecCCCC
Q psy9687 81 CYPGYTGKTCADDIKECES-NPCQYGGTCLEH-SNMSLYQRSDLP 123 (141)
Q Consensus 81 C~~g~~~~~c~~~~~~c~~-~~c~~~~~C~~~-~~~~~~~~~~~~ 123 (141)
|++||.|..|+.++++|.. .+|.++++|++. .+.+.|.|...+
T Consensus 118 C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~ 162 (169)
T 2vj2_A 118 CETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGY 162 (169)
T ss_dssp ECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTC
T ss_pred CCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCC
Confidence 9999999999778888975 789999999986 778999886544
No 22
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.14 E-value=2.1e-12 Score=79.75 Aligned_cols=106 Identities=30% Similarity=0.618 Sum_probs=71.1
Q ss_pred cccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCC---cCCC--cCcC-----------CCCCCCCEEeeCCCC--
Q psy9687 15 TNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCE---INID--DCAP-----------NPCKNGARCVDKVKD-- 76 (141)
Q Consensus 15 ~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~---~~~~--~c~~-----------~~c~~~~~c~~~~~~-- 76 (141)
.++++|...||.+ ++|+++.++|.|.|.+ ||++..+. .+.. .|.. ..+.....|.+..+.
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~-G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~ 79 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSS-ESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAW 79 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCT-TEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEE
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCC-CcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCccc
Confidence 4789999999986 6999999999999995 99865331 0111 1100 000000111122222
Q ss_pred --------eeecCCCCCC---CCCCCCCCCCCcCC--CCCCCCEEeecCCCcceecCCCCC
Q psy9687 77 --------YLCECYPGYT---GKTCADDIKECESN--PCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 77 --------~~c~C~~g~~---~~~c~~~~~~c~~~--~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
|.|.|++||. |..|. ++++|... +|.+ +.|++..++|.|.|...+.
T Consensus 80 g~~C~~c~~~C~C~~Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~ 138 (147)
T 2w86_A 80 GSPCTLCQVDPICGKGYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMT 138 (147)
T ss_dssp TTTTEECCCCTTTCTTEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCC
T ss_pred CCCcccCCCcccCCCccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCc
Confidence 6689999994 88885 89999854 4986 4999999999999875554
No 23
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.13 E-value=9.2e-12 Score=75.73 Aligned_cols=76 Identities=39% Similarity=0.967 Sum_probs=25.5
Q ss_pred ccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCC-CcCcCC--CCCCCCEEeeCCCCeeecCCCCCC--
Q psy9687 12 LCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINI-DDCAPN--PCKNGARCVDKVKDYLCECYPGYT-- 86 (141)
Q Consensus 12 ~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~-~~c~~~--~c~~~~~c~~~~~~~~c~C~~g~~-- 86 (141)
.|. ++++|...||.+++.|.+..++|.|.|.+ ||.|..|+..+ ++|... +|.. .|++..++|.|.|++||.
T Consensus 38 ~c~-d~d~C~~~pC~n~g~C~~~~~~y~C~C~~-G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~ 113 (134)
T 2vh0_B 38 KYK-DGDQCETSPCQNQGKCKDGLGEYTCTCLE-GFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLA 113 (134)
T ss_dssp ---------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEEC
T ss_pred cCC-CcCcCCCCCCCCcCCcccCCCCEEeeCCC-CccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEEC
Confidence 454 78999999999999999999999999994 99999997446 778753 3543 899999999999999998
Q ss_pred --CCCCC
Q psy9687 87 --GKTCA 91 (141)
Q Consensus 87 --~~~c~ 91 (141)
|..|.
T Consensus 114 ~~g~~C~ 120 (134)
T 2vh0_B 114 DNGKACI 120 (134)
T ss_dssp TTSSCEE
T ss_pred CCCCccC
Confidence 66663
No 24
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.12 E-value=3.9e-11 Score=68.13 Aligned_cols=76 Identities=21% Similarity=0.363 Sum_probs=61.0
Q ss_pred ceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCC-CCCCCCcCCCCCCCCEEeecC--C
Q psy9687 37 NYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCA-DDIKECESNPCQYGGTCLEHS--N 113 (141)
Q Consensus 37 ~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~-~~~~~c~~~~c~~~~~C~~~~--~ 113 (141)
+|.|.|.+ ||.|..| ++++|+..|| ++..+.|.|.|++||. .|+ .++++|..++|.++++|++.. +
T Consensus 1 sy~C~C~~-g~~g~~c--~~~~c~~~pC------~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~ 69 (91)
T 1tpg_A 1 SYQVICRD-EKTQMIY--QQHQSWLRPV------LRSNRVEYCWCNSGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFS 69 (91)
T ss_dssp CCCCCCBC-SSSCCBC--CSSCEEEEEC------SSSSCEEEEECSSSCC--BCCEECEEECSSCCSCTTCEEEEESSSS
T ss_pred CeeeECCC-CCcCCeE--CCCcccCCcc------ccCCCCcEeECCCCCc--ccccCcCCcccCCCCCCCCEeecCCCCC
Confidence 47899995 9999888 4677766554 3456789999999997 775 478999999999999999987 8
Q ss_pred CcceecCCCC
Q psy9687 114 MSLYQRSDLP 123 (141)
Q Consensus 114 ~~~~~~~~~~ 123 (141)
.+.|.|...+
T Consensus 70 ~~~C~C~~G~ 79 (91)
T 1tpg_A 70 DFVCQCPEGF 79 (91)
T ss_dssp CEEEECCTTC
T ss_pred CeEeECCCCC
Confidence 8888886443
No 25
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.09 E-value=2.8e-11 Score=70.71 Aligned_cols=77 Identities=27% Similarity=0.657 Sum_probs=35.1
Q ss_pred eeccCCcccccccccCCCCCC--CCCCCCEEeecCCceeEecCCCCccC---CCCCcCCCcCcC-CCCCCCCEEeeCCCC
Q psy9687 3 VLWSQNGLRLCETNIDDCESG--PCLNGGLCKDLLNNYTCNCQQTGYTG---PHCEINIDDCAP-NPCKNGARCVDKVKD 76 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~--~c~~~~~C~~~~g~~~c~c~~~g~~g---~~c~~~~~~c~~-~~c~~~~~c~~~~~~ 76 (141)
....+|.+..| ++++|... .|. +.|.+..++|.|.|.+ ||.+ ..|+ ++++|.. .+|. +.|+++.++
T Consensus 17 ~~~~~~~~~~C--d~neC~~~~~~C~--~~C~n~~g~y~C~C~~-Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gs 88 (107)
T 2w2n_E 17 TTENLYFQGAM--GTNECLDNNGGCS--YVCNDLKIGYECLCPD-GFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGG 88 (107)
T ss_dssp ---CCCCSCCB--SCCGGGTGGGGCS--SEEECCSBSCEEECCT-TCEEETTTEEE-C----------------------
T ss_pred ccCCCcCCCCC--cCccCcCCCCCCC--CEeEeCCCCeEEECCC-CccccCCCccc-cccccCCCCCcC--CeeecCCCC
Confidence 45677888999 67888754 354 4899999999999994 9986 7785 8888873 5674 689999999
Q ss_pred eeecCCCCCCC
Q psy9687 77 YLCECYPGYTG 87 (141)
Q Consensus 77 ~~c~C~~g~~~ 87 (141)
|.|.|++||.+
T Consensus 89 y~C~C~~Gy~~ 99 (107)
T 2w2n_E 89 YKCQCEEGFQL 99 (107)
T ss_dssp -----------
T ss_pred EEEECCCCceE
Confidence 99999999975
No 26
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.08 E-value=1.4e-10 Score=79.88 Aligned_cols=69 Identities=38% Similarity=0.992 Sum_probs=60.6
Q ss_pred ccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcC---CCCCCCCEEeeCCCCeeecCCCCCCC
Q psy9687 16 NIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAP---NPCKNGARCVDKVKDYLCECYPGYTG 87 (141)
Q Consensus 16 ~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~---~~c~~~~~c~~~~~~~~c~C~~g~~~ 87 (141)
++++|...||.+++.|.+..++|.|.|.+ ||.|+.|+.++++|.. .+|.+ .|.+..+.|.|.|++||.+
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~-g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~ 75 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSP-GYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGYRL 75 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSS-SCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTEEC
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCC-CCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEeccccccc
Confidence 67889999999999999999999999994 9999999778999986 67865 8999999999999999975
No 27
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.07 E-value=3e-10 Score=85.18 Aligned_cols=104 Identities=25% Similarity=0.433 Sum_probs=78.5
Q ss_pred eeccCCccccccccc--------CCCCCC----CCCCCCEEeecCCceeEecC----CCCccCCCCCcCCCcCcC---CC
Q psy9687 3 VLWSQNGLRLCETNI--------DDCESG----PCLNGGLCKDLLNNYTCNCQ----QTGYTGPHCEINIDDCAP---NP 63 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~--------~~c~~~----~c~~~~~C~~~~g~~~c~c~----~~g~~g~~c~~~~~~c~~---~~ 63 (141)
.|.++|.|..|+..+ ++|... +|.+++.|.. +.|.|. + ||.|..|+.+...|.. .+
T Consensus 461 ~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~-Gy~G~~Ce~~~~~C~~~~~~~ 535 (690)
T 3fcs_B 461 RCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFG-KITGKYCECDDFSCVRYKGEM 535 (690)
T ss_dssp EECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSC-CCBSTTSCBCSSCCCBSSSSB
T ss_pred EeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCC-CeeCCCcCcccCcCcCCCCCC
Confidence 478899999997554 567653 3888888873 489998 6 8999999766677763 46
Q ss_pred CCCCCEEeeCCCCeeecCCCCCCCCCCC--CCCCCCcC---CCCCCCCEEeecCCCcceec
Q psy9687 64 CKNGARCVDKVKDYLCECYPGYTGKTCA--DDIKECES---NPCQYGGTCLEHSNMSLYQR 119 (141)
Q Consensus 64 c~~~~~c~~~~~~~~c~C~~g~~~~~c~--~~~~~c~~---~~c~~~~~C~~~~~~~~~~~ 119 (141)
|..++.|.. +.|.|.+||.|..|+ .+.+.|.. .+|.+++.|.. ..|.|
T Consensus 536 C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~----g~C~C 588 (690)
T 3fcs_B 536 CSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVC 588 (690)
T ss_dssp GGGSEEEET----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET----TEEEC
T ss_pred CCCCCEecC----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC----CEEEC
Confidence 888888865 569999999999886 56778875 46888999964 26666
No 28
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.98 E-value=4.2e-10 Score=70.97 Aligned_cols=80 Identities=29% Similarity=0.868 Sum_probs=65.3
Q ss_pred eeccCCcccccccccCCCCCCC-CCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcC-CCCCCCCEEeeC-CCCeee
Q psy9687 3 VLWSQNGLRLCETNIDDCESGP-CLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAP-NPCKNGARCVDK-VKDYLC 79 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~-c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~-~~c~~~~~c~~~-~~~~~c 79 (141)
.|.++|.|..|+ +|...+ |.++ .|. +.+.|.|.+ ||.|..|+.++++|.. .+|.+++.|++. .+.|.|
T Consensus 86 ~C~~G~~G~~C~----~C~~~~~C~~g-~C~---~~~~C~C~~-G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C 156 (169)
T 2vj2_A 86 RCQYGWQGLYCD----KCIPHPGCVHG-ICN---EPWQCLCET-NWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQC 156 (169)
T ss_dssp EECTTEESSSSC----EECCCTTCSSE-ECS---STTCCEECT-TEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEE
T ss_pred ECCCCCCCCCcc----cCCCCCCCCCC-CcC---CCCEEeCCC-CCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEe
Confidence 478899999995 255555 7654 786 568999995 9999999767888874 789999999986 788999
Q ss_pred cCCCCCCCCCCC
Q psy9687 80 ECYPGYTGKTCA 91 (141)
Q Consensus 80 ~C~~g~~~~~c~ 91 (141)
.|++||.|..|+
T Consensus 157 ~C~~G~~G~~Ce 168 (169)
T 2vj2_A 157 SCPEGYSGPNCE 168 (169)
T ss_dssp ECCTTCCSTTSC
T ss_pred ECCCCCcCcCcC
Confidence 999999998774
No 29
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.95 E-value=1.1e-09 Score=60.95 Aligned_cols=67 Identities=33% Similarity=0.742 Sum_probs=55.9
Q ss_pred CCCcCcC-CCCCCCCEEeeCCCCeeecCCCCCC--CCCCCCCCCCCc-CCCCCCCCEEeecCCCcceecCCCCC
Q psy9687 55 NIDDCAP-NPCKNGARCVDKVKDYLCECYPGYT--GKTCADDIKECE-SNPCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 55 ~~~~c~~-~~c~~~~~c~~~~~~~~c~C~~g~~--~~~c~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
++++|.. .+|.+ +.|+++.++|.|.|++||. |..| .++++|. .++|.+ +.|++..++|.|.|...+.
T Consensus 4 dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C-~dideC~~~~~C~~-~~C~n~~g~y~C~C~~G~~ 74 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNEC-VDTDECSVGNPCGN-GTCKNVIGGFECTCEEGFE 74 (82)
T ss_dssp CCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEE-EECCGGGTCCTTSS-SCEEECSSSEEECCSSSSC
T ss_pred ccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCcc-CCcccccCCCCCCC-CEeECCCCCEEeECCCCeE
Confidence 6788874 67864 7999999999999999996 8888 5899997 578986 5999999999998865544
No 30
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.91 E-value=2.6e-09 Score=73.88 Aligned_cols=91 Identities=35% Similarity=0.869 Sum_probs=47.1
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCC
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECY 82 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~ 82 (141)
.|.++|.|..|+. +.|.+ +|.+++.|.. .+.|.|.+ ||.|..|+. ..|. .+|.+++.|.. .+.|.|+
T Consensus 168 ~C~~G~~G~~C~~--~~C~~-~C~~~G~C~~---~~~C~C~~-G~~G~~C~~--~~C~-~~C~~~G~C~~---~~~C~C~ 234 (324)
T 2ygq_A 168 ECPDGFHGPHCEK--ALCTP-RCMNGGLCVT---PGFCICPP-GFYGVNCDK--ANCS-TTCFNGGTCFY---PGKCICP 234 (324)
T ss_dssp ECCTTEESSSSCE--ESSSS-CCCTTCEECS---SCCEECCT-TCBTTTTCB--CCCS-SCCCSSCCBSC---SSCBCCC
T ss_pred ECCCCCcCCCCCC--CCCCC-CCCCCCEEcC---CCEEeCCC-CccCCCccc--CcCC-CCCCCCCeeCC---CCeeeCC
Confidence 3667777777753 34543 5777777754 35777774 777777742 3343 45666666654 2457777
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCEEe
Q psy9687 83 PGYTGKTCADDIKECESNPCQYGGTCL 109 (141)
Q Consensus 83 ~g~~~~~c~~~~~~c~~~~c~~~~~C~ 109 (141)
+||.|..|+ ++.|. .+|.+++.|.
T Consensus 235 ~G~~G~~C~--~~~C~-~~C~~~g~C~ 258 (324)
T 2ygq_A 235 PGLEGEQCE--ISKCP-QPCRNGGKCI 258 (324)
T ss_dssp TTCCTTTTC------------------
T ss_pred CCccCCCCC--cCcCC-CcCCCCCEEC
Confidence 777776663 33453 4566666665
No 31
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.90 E-value=3.5e-12 Score=85.08 Aligned_cols=85 Identities=13% Similarity=0.083 Sum_probs=62.8
Q ss_pred ccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcC------cC----------------------
Q psy9687 10 LRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDC------AP---------------------- 61 (141)
Q Consensus 10 g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c------~~---------------------- 61 (141)
|..|. ..++|...||.++++|++...+|+|.|+. ||+|..|+.++++| ..
T Consensus 93 G~~c~-~~~eC~s~pC~ngG~C~~~~~sy~C~C~~-Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~ 170 (267)
T 4fbr_A 93 GARDK-QNIVAVSIKSNDGGKTLTGTTTYNGEGPI-GFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINV 170 (267)
T ss_dssp CCCSS-CCEEEEEEECSSTTSEEEEEEEETTSCCE-EEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEE
T ss_pred cCccc-cccccCCCCCCCCCEEecCCccEEeeCCC-CccccCCCCCcccccccCCcCCccccCCcceecccccccccccC
Confidence 44443 23356667788888888888899999995 99988887655542 11
Q ss_pred -CCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCC
Q psy9687 62 -NPCKNGARCVDKVKDYLCECYPGYTGKTCADDIKE 96 (141)
Q Consensus 62 -~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~ 96 (141)
.+|.+++.|++....|+|.|++||+|..|..++++
T Consensus 171 ~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~~~i~e 206 (267)
T 4fbr_A 171 DAKSNDGGKTLSGTMTYNGEGPIGFRGTLTSPDTYT 206 (267)
T ss_dssp EEECSSTTSEEEEEEEETTSCCEEEEEEEEETTEEE
T ss_pred CCCCCCCCEeeCCCCCeEEeCCCCccccccccccce
Confidence 23566777888788899999999999888777776
No 32
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.88 E-value=2.9e-09 Score=54.32 Aligned_cols=46 Identities=26% Similarity=0.549 Sum_probs=35.9
Q ss_pred ccccccccCCCCCCCCCCCCEEe-----ecCCceeEecCCCCccCCCCCcCC
Q psy9687 10 LRLCETNIDDCESGPCLNGGLCK-----DLLNNYTCNCQQTGYTGPHCEINI 56 (141)
Q Consensus 10 g~~C~~~~~~c~~~~c~~~~~C~-----~~~g~~~c~c~~~g~~g~~c~~~~ 56 (141)
|..|..++++|...||.++++|. ...+.|+|.|.+ +|+|+.|+..+
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~-g~~G~~CE~~v 51 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPN-EFTGDRCQNYV 51 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECT-TEESTTSCEEC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCC-CCcCCCcCccC
Confidence 45788889999999999999995 445689999994 99999997543
No 33
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.87 E-value=1.1e-09 Score=75.69 Aligned_cols=102 Identities=33% Similarity=0.749 Sum_probs=35.4
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCC
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECY 82 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~ 82 (141)
.|.++|.|..|+. +.|. .+|.+++.|... +.|.|.+ ||.|..|+ ++.|. .+|.+++.|.. .+.|.|+
T Consensus 200 ~C~~G~~G~~C~~--~~C~-~~C~~~G~C~~~---~~C~C~~-G~~G~~C~--~~~C~-~~C~~~g~C~~---~~~C~C~ 266 (324)
T 2ygq_A 200 ICPPGFYGVNCDK--ANCS-TTCFNGGTCFYP---GKCICPP-GLEGEQCE--ISKCP-QPCRNGGKCIG---KSKCKCS 266 (324)
T ss_dssp ECCTTCBTTTTCB--CCCS-SCCCSSCCBSCS---SCBCCCT-TCCTTTTC-----------------------------
T ss_pred eCCCCccCCCccc--CcCC-CCCCCCCeeCCC---CeeeCCC-CccCCCCC--cCcCC-CcCCCCCEECC---CCEEECC
Confidence 4789999999963 4575 569888999763 6899995 99999995 45564 57888888863 4679999
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCEEeecCCCcceecCCCC
Q psy9687 83 PGYTGKTCADDIKECESNPCQYGGTCLEHSNMSLYQRSDLP 123 (141)
Q Consensus 83 ~g~~~~~c~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~~~ 123 (141)
+||.|..|+ .+.|. .+|.++++|.+ .+.|.|...+
T Consensus 267 ~G~~G~~C~--~~~C~-~~C~~~g~C~~---~~~C~C~~G~ 301 (324)
T 2ygq_A 267 KGYQGDLCS--KPVCE-PGCGAHGTCHE---PNKCQCQEGW 301 (324)
T ss_dssp -----------------------------------------
T ss_pred CCCcCCCCc--CCCCC-CCCCCCCEECC---CCEeECCCCC
Confidence 999999885 45565 57888999975 3567775433
No 34
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.86 E-value=8.5e-12 Score=83.24 Aligned_cols=86 Identities=14% Similarity=0.114 Sum_probs=62.8
Q ss_pred cccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCc-----------------------------C
Q psy9687 9 GLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDD-----------------------------C 59 (141)
Q Consensus 9 ~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~-----------------------------c 59 (141)
.|..+...+..+. .+|.++++|++..++|+|.|+ .||+|..|+..+++ |
T Consensus 25 ~g~~~~~n~~~~~-~~c~ngG~C~~g~~~y~C~Cp-~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC 102 (267)
T 4fbr_A 25 IGARDKQNVVALD-IKSDDGGKTLKGTMTYNGEGP-IGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVA 102 (267)
T ss_dssp CCCCSSCCEEEEE-EECSSTTSEEEEEEEETTSCC-EEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEE
T ss_pred eccccccccccCC-CCcCCCCeecCCCCCeEEeCC-CCcccccccccccccccccCcCCCcccCCCeeeccCcccccccc
Confidence 3444443333332 358888999999999999999 49988888665554 3
Q ss_pred cCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCC
Q psy9687 60 APNPCKNGARCVDKVKDYLCECYPGYTGKTCADDIKE 96 (141)
Q Consensus 60 ~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~ 96 (141)
...||.+++.|++...+|+|.|+.||+|..|+.++++
T Consensus 103 ~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~ 139 (267)
T 4fbr_A 103 VSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYS 139 (267)
T ss_dssp EEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEE
T ss_pred CCCCCCCCCEEecCCccEEeeCCCCccccCCCCCccc
Confidence 3446777788888888999999999988877665554
No 35
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.86 E-value=9.9e-10 Score=61.64 Aligned_cols=67 Identities=34% Similarity=0.849 Sum_probs=53.7
Q ss_pred CCCcCcCCC--CCCCCEEeeCCCCeeecCCCCCC-----CCCCCCCCCCCcCCC--CCCCCEEeecCCCcceecCCCCC
Q psy9687 55 NIDDCAPNP--CKNGARCVDKVKDYLCECYPGYT-----GKTCADDIKECESNP--CQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 55 ~~~~c~~~~--c~~~~~c~~~~~~~~c~C~~g~~-----~~~c~~~~~~c~~~~--c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
++++|...+ |.. +.|+++.++|.|.|++||. +..|. ++++|...+ |. ++.|++..++|.|.|...+.
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~ 77 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCHNTEGSYRCECPPGHQ 77 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEEEETTEEEEESCTTSC
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeEcCCCCEEEECcCCcc
Confidence 567787554 754 5899999999999999996 66774 899998776 65 58999999999999875554
No 36
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.86 E-value=5.8e-09 Score=78.36 Aligned_cols=94 Identities=28% Similarity=0.685 Sum_probs=74.6
Q ss_pred cCCcccccccccCCCCC---CCCCCCCEEeecCCceeEecCCCCccCCCCC--cCCCcCcC---CCCCCCCEEeeCCCCe
Q psy9687 6 SQNGLRLCETNIDDCES---GPCLNGGLCKDLLNNYTCNCQQTGYTGPHCE--INIDDCAP---NPCKNGARCVDKVKDY 77 (141)
Q Consensus 6 ~~~~g~~C~~~~~~c~~---~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~--~~~~~c~~---~~c~~~~~c~~~~~~~ 77 (141)
++|.|..|+.+.+.|.. .+|.+++.|.. +.|.|.+ ||.|..|+ .+++.|.. .+|..++.|...
T Consensus 514 ~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~-Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g---- 584 (690)
T 3fcs_B 514 GKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDS-DWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECG---- 584 (690)
T ss_dssp CCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECT-TEESSSSCEECCCTTTBCTTSSBTSSSCEEETT----
T ss_pred CCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcC-CCcCCCCccCCCCCcccCCCCCCCCCCCEEeCC----
Confidence 89999999877788875 36888889975 6999994 99999996 45677874 569999999652
Q ss_pred eecC-CCCCCCCCCCCCCCCCcCCCCCCCCEEee
Q psy9687 78 LCEC-YPGYTGKTCADDIKECESNPCQYGGTCLE 110 (141)
Q Consensus 78 ~c~C-~~g~~~~~c~~~~~~c~~~~c~~~~~C~~ 110 (141)
.|.| .+||.|..|+. ...| .++|.+++.|++
T Consensus 585 ~C~C~~~Gy~G~~Ce~-C~~C-~~~C~~~g~Cv~ 616 (690)
T 3fcs_B 585 SCVCIQPGSYGDTCEK-CPTC-PDACTFKKECVE 616 (690)
T ss_dssp EEECCSTTCBSTTSCB-CTTS-CCTTTSCCGGGT
T ss_pred EEECCCCCccCCCcCc-CCCC-CCCCCCCCCccc
Confidence 6999 99999999953 2445 467888888864
No 37
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.82 E-value=1.4e-09 Score=61.13 Aligned_cols=62 Identities=34% Similarity=0.808 Sum_probs=52.8
Q ss_pred CCCcCcCCC--CCCCCEEeeCCCCeeecCCCCCC----CCCCCCCCCCCcCCCCCCCCEEeecCCCcceecC
Q psy9687 55 NIDDCAPNP--CKNGARCVDKVKDYLCECYPGYT----GKTCADDIKECESNPCQYGGTCLEHSNMSLYQRS 120 (141)
Q Consensus 55 ~~~~c~~~~--c~~~~~c~~~~~~~~c~C~~g~~----~~~c~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~ 120 (141)
++++|...+ | .++.|.++.++|.|.|++||. +..| .++++|..++|. +.|++..++|.|.|.
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C-~dideC~~~~C~--~~C~n~~g~y~C~C~ 69 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSC-EDIDECSENMCA--QLCVNYPGGYTCYCD 69 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEE-ECCCHHHHSCCS--SEECCCSSSCCEECC
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcC-CCcCeeCCCCCC--CEEEccCCCEEEECC
Confidence 567787666 7 678899999999999999997 6778 489999888887 799999999999983
No 38
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.82 E-value=4.2e-09 Score=64.80 Aligned_cols=72 Identities=28% Similarity=0.594 Sum_probs=54.5
Q ss_pred CCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCCCcCCCCCCCCEE-eecCCCcceecCCCCC
Q psy9687 51 HCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADDIKECESNPCQYGGTC-LEHSNMSLYQRSDLPA 124 (141)
Q Consensus 51 ~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~c~~~~c~~~~~C-~~~~~~~~~~~~~~~~ 124 (141)
.| .++++|...+|.+++.|++..++|.|.|++||.|..|. ++++|...+......| ++..++|.|.|...+.
T Consensus 44 ~c-~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~ 116 (146)
T 1x7a_L 44 QY-VDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQFCKTGADSKVLCSCTTGYR 116 (146)
T ss_dssp -------CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEE
T ss_pred cC-CCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcCCCCCCCCCCEEeEcCCCcE
Confidence 46 37889999999999999999999999999999999995 6688986533333389 9999999998865443
No 39
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.81 E-value=7.3e-09 Score=71.34 Aligned_cols=67 Identities=28% Similarity=0.656 Sum_probs=57.6
Q ss_pred CCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCCCcC---CCCCCCCEEeecCCCcceecCCCC
Q psy9687 55 NIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADDIKECES---NPCQYGGTCLEHSNMSLYQRSDLP 123 (141)
Q Consensus 55 ~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~c~~---~~c~~~~~C~~~~~~~~~~~~~~~ 123 (141)
++++|...||.+++.|.+..++|.|.|++||.|..|+.++++|.. .+|.+ .|++..+++.|.|...+
T Consensus 4 d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCLPGQESYTCSCAQGY 73 (317)
T ss_dssp --CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTE
T ss_pred cCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccccCCCeeEEeccccc
Confidence 567788889999999999999999999999999999779999987 67877 99999999999886543
No 40
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.80 E-value=1e-09 Score=65.21 Aligned_cols=76 Identities=22% Similarity=0.513 Sum_probs=58.7
Q ss_pred eccCCcccccccccCC----CCCCCCCCCCEEeecCCceeEecCCCCcc---CCCCCcCCCcCcC-CCCCCCCEEeeCCC
Q psy9687 4 LWSQNGLRLCETNIDD----CESGPCLNGGLCKDLLNNYTCNCQQTGYT---GPHCEINIDDCAP-NPCKNGARCVDKVK 75 (141)
Q Consensus 4 ~~~~~~g~~C~~~~~~----c~~~~c~~~~~C~~~~g~~~c~c~~~g~~---g~~c~~~~~~c~~-~~c~~~~~c~~~~~ 75 (141)
|.++|.|..+ ++++ |...+|. +.|.+ .++|.|.|.+ ||. |..| .++++|.. .+| ++.|+++.+
T Consensus 28 C~~Gy~g~~~--~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~-Gy~~~~g~~C-~dideC~~~~~C--~~~C~n~~g 98 (118)
T 1dx5_I 28 CAEGFAPIPH--EPHRCQMFCNQTACP--ADCDP-NTQASCECPE-GYILDDGFIC-TDIDECENGGFC--SGVCHNLPG 98 (118)
T ss_dssp CCTTEEEETT--EEEEEEECCCSSEEE--CEECT-TSTTCEECCT-TEEEETTTEE-EECCHHHHCSSC--SSEEEECSS
T ss_pred CCCCccccCC--CCCccccccCCCCCC--CcccC-CCCeEeECCC-CccCCCCCcc-ccccccCCCCCC--cCeEEeCCC
Confidence 6778887744 2233 4444554 57887 5889999995 998 8889 48899976 778 689999999
Q ss_pred CeeecCCCCCCCC
Q psy9687 76 DYLCECYPGYTGK 88 (141)
Q Consensus 76 ~~~c~C~~g~~~~ 88 (141)
+|.|.|++||.+.
T Consensus 99 ~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 99 TFECICGPDSALA 111 (118)
T ss_dssp SEEEEECSSSSCE
T ss_pred CEEEECCCCCccC
Confidence 9999999999753
No 41
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.78 E-value=5e-09 Score=64.19 Aligned_cols=69 Identities=28% Similarity=0.698 Sum_probs=56.1
Q ss_pred CCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCCCcCCCCCCCC---EEeecCC-CcceecCCCC
Q psy9687 55 NIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADDIKECESNPCQYGG---TCLEHSN-MSLYQRSDLP 123 (141)
Q Consensus 55 ~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~c~~~~c~~~~---~C~~~~~-~~~~~~~~~~ 123 (141)
++++|...+|.+++.|++..++|.|.|++||.|..|..+++.|..-++.+++ .|++..+ +|.|.|...+
T Consensus 46 did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy 118 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGY 118 (142)
T ss_dssp TCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTE
T ss_pred ccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCc
Confidence 7788988899999999999999999999999999997556665433444454 9999998 9999886544
No 42
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.75 E-value=1.4e-08 Score=76.18 Aligned_cols=106 Identities=23% Similarity=0.525 Sum_probs=74.2
Q ss_pred eeccCCcccccccccC---------CCCCC----CCCCCCEEeecCCceeEecC------CCCccCCCCCcCCCcCcC--
Q psy9687 3 VLWSQNGLRLCETNID---------DCESG----PCLNGGLCKDLLNNYTCNCQ------QTGYTGPHCEINIDDCAP-- 61 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~---------~c~~~----~c~~~~~C~~~~g~~~c~c~------~~g~~g~~c~~~~~~c~~-- 61 (141)
.|.++|.|..|+-..+ .|... +|.+++.|.. + .|.|. + +|.|..|+.+...|..
T Consensus 449 ~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~-G~~G~~Ce~~~~~C~~~~ 523 (687)
T 3k6s_B 449 RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGK-LIYGQYCECDTINCERYN 523 (687)
T ss_dssp EECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTC-CEESTTSCEESSCSCEET
T ss_pred EcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCC-CccccccccccccccCCC
Confidence 4788999999974333 46543 3778888873 2 88888 6 8999999655666752
Q ss_pred -CCCCC--CCEEeeCCCCeeecCCCCCCCCCCC--CCCCCCcCC---CCCCCCEEeecCCCcceecCC
Q psy9687 62 -NPCKN--GARCVDKVKDYLCECYPGYTGKTCA--DDIKECESN---PCQYGGTCLEHSNMSLYQRSD 121 (141)
Q Consensus 62 -~~c~~--~~~c~~~~~~~~c~C~~g~~~~~c~--~~~~~c~~~---~c~~~~~C~~~~~~~~~~~~~ 121 (141)
.+|.. ++.|.. + .|.|.+||.|..|+ .+.+.|... +|..++.|.. ..|.|..
T Consensus 524 ~~~C~~~~~G~C~~--g--~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~ 583 (687)
T 3k6s_B 524 GQVCGGPGRGLCFC--G--KCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHS 583 (687)
T ss_dssp TEETSHHHHEEEET--T--EEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS----SCBCCST
T ss_pred CcCcCCCCCCeEEC--C--EEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC----CEEECCC
Confidence 35776 778863 2 59999999999886 235677654 6888888865 3466643
No 43
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.73 E-value=6.8e-09 Score=52.97 Aligned_cols=47 Identities=26% Similarity=0.646 Sum_probs=37.1
Q ss_pred CCCCCcCCCcCcCCCCCCCCEEe-----eCCCCeeecCCCCCCCCCCCCCCC
Q psy9687 49 GPHCEINIDDCAPNPCKNGARCV-----DKVKDYLCECYPGYTGKTCADDIK 95 (141)
Q Consensus 49 g~~c~~~~~~c~~~~c~~~~~c~-----~~~~~~~c~C~~g~~~~~c~~~~~ 95 (141)
|..|+.++++|...||.+++.|. +..+.|.|.|++||.|..|+..+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 45676678999999999999994 556789999999999999976553
No 44
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.73 E-value=1.8e-09 Score=69.37 Aligned_cols=71 Identities=28% Similarity=0.652 Sum_probs=21.3
Q ss_pred CCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCC-CCCcCC--CCCCCCEEeecCCCcceecCCCCC
Q psy9687 51 HCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADDI-KECESN--PCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 51 ~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~-~~c~~~--~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
.| .++++|...||.+++.|++..++|.|.|++||.|..|..++ ++|... +|.. .|++..++|.|.|...+.
T Consensus 38 ~c-~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 38 KY-KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred cC-CCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCce
Confidence 35 37889998999999999999999999999999999997667 789874 4654 999999999998875443
No 45
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.72 E-value=1e-08 Score=60.46 Aligned_cols=70 Identities=21% Similarity=0.544 Sum_probs=51.3
Q ss_pred CCCcCcCCC--------CCCCCEEeeCCCCeeecCCCCCCCCCCCCCC--CCCcCCCCCCCCEEeecCCCcceecCCCCC
Q psy9687 55 NIDDCAPNP--------CKNGARCVDKVKDYLCECYPGYTGKTCADDI--KECESNPCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 55 ~~~~c~~~~--------c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~--~~c~~~~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
++++|...| |.+++.|++..++|.|.|++||.|..|+..+ ++|..........|++..++|.|.|...+.
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEE
T ss_pred ecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCee
Confidence 456666666 8888999999999999999999999986433 367653322233999999999999875443
No 46
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.66 E-value=2.8e-08 Score=70.52 Aligned_cols=66 Identities=32% Similarity=0.849 Sum_probs=54.9
Q ss_pred CCCCCCCCCCCCEEeecCCceeEecCCCCcc---CCCCCcCCCcCc-CCCCCCCCEEeeCCCCeeecCCCCCCC
Q psy9687 18 DDCESGPCLNGGLCKDLLNNYTCNCQQTGYT---GPHCEINIDDCA-PNPCKNGARCVDKVKDYLCECYPGYTG 87 (141)
Q Consensus 18 ~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~---g~~c~~~~~~c~-~~~c~~~~~c~~~~~~~~c~C~~g~~~ 87 (141)
++|...++...+.|.++.++|.|.|.+ ||. |+.|+ ++++|. ..+|.. .|.++.++|.|.|.+||.+
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~-G~~~~~~~~C~-dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~ 70 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPD-GFQLVAQRRCE-DIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQL 70 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCT-TEEECSSSCEE-ECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCC-CCCcCCCCccc-CchhhhccCCCCC--ccCCCccceeeeccccccc
Confidence 467767766667999999999999995 998 78895 899997 355654 8999999999999999964
No 47
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.65 E-value=9.4e-09 Score=59.94 Aligned_cols=73 Identities=23% Similarity=0.433 Sum_probs=34.3
Q ss_pred CccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCC---CCCCCCCCCCcC-CCCCCCCEEeecCCCcceecCC
Q psy9687 46 GYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTG---KTCADDIKECES-NPCQYGGTCLEHSNMSLYQRSD 121 (141)
Q Consensus 46 g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~---~~c~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~ 121 (141)
+|.+..| ++++|..........|.+..++|.|.|++||.+ ..|. ++++|.. .+|. +.|++..++|.|.|..
T Consensus 21 ~~~~~~C--d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~n~~gsy~C~C~~ 95 (107)
T 2w2n_E 21 LYFQGAM--GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEE 95 (107)
T ss_dssp CCCSCCB--SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C-----------------------------
T ss_pred CcCCCCC--cCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--CeeecCCCCEEEECCC
Confidence 6778888 578887432222358999999999999999986 6785 9999974 5785 7999999999998865
Q ss_pred CC
Q psy9687 122 LP 123 (141)
Q Consensus 122 ~~ 123 (141)
.+
T Consensus 96 Gy 97 (107)
T 2w2n_E 96 GF 97 (107)
T ss_dssp --
T ss_pred Cc
Confidence 44
No 48
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.64 E-value=4.8e-09 Score=63.64 Aligned_cols=71 Identities=28% Similarity=0.652 Sum_probs=21.0
Q ss_pred CCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCC-CCCcCC--CCCCCCEEeecCCCcceecCCCCC
Q psy9687 51 HCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADDI-KECESN--PCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 51 ~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~-~~c~~~--~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
.| .++++|...+|.+++.|++..++|.|.|++||.|..|..++ ++|... +|.. .|++..++|.|.|...+.
T Consensus 38 ~c-~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 38 KY-KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred cC-CCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcE
Confidence 45 37788988899999999999999999999999999997557 788764 4554 999999999998875443
No 49
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.61 E-value=8e-08 Score=45.54 Aligned_cols=37 Identities=57% Similarity=1.264 Sum_probs=29.3
Q ss_pred ccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCC
Q psy9687 16 NIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCE 53 (141)
Q Consensus 16 ~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~ 53 (141)
++++|...||.+++.|.+..++|.|.|. .+|+|+.|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~-~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCP-FGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECC-TTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECC-CCCcCCccC
Confidence 5677877888888888888888888888 488887774
No 50
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.58 E-value=1.9e-07 Score=66.79 Aligned_cols=108 Identities=26% Similarity=0.614 Sum_probs=73.0
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCC----------cCc-CCCCCCCCEEe
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINID----------DCA-PNPCKNGARCV 71 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~----------~c~-~~~c~~~~~c~ 71 (141)
.|.++|.|..|.. .| .+|.+++.|.. +.+.|.|.+ +|.|..|+.... .|. ..+|..++.|.
T Consensus 188 ~C~~g~~G~~C~~---~C--~~C~~~G~C~~--~~g~C~C~~-G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~ 259 (423)
T 2gy5_A 188 RCEAQKWGPECNH---LC--TACMNNGVCHE--DTGECICPP-GFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL 259 (423)
T ss_dssp SSCTTEESTTSCE---EC--CCCCTTCEECT--TTCCEECCT-TEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE
T ss_pred cCCCCCCCCCCCC---CC--CCCCCCCEEEC--CCCcEeCCC-CccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC
Confidence 3777888888863 24 37889999976 457999995 999999963221 232 34566667774
Q ss_pred eCCCCeeecCCCCCCCCCCCCCC------CCCcCC-CCCCCCEEeecCCCcceecCCCC
Q psy9687 72 DKVKDYLCECYPGYTGKTCADDI------KECESN-PCQYGGTCLEHSNMSLYQRSDLP 123 (141)
Q Consensus 72 ~~~~~~~c~C~~g~~~~~c~~~~------~~c~~~-~c~~~~~C~~~~~~~~~~~~~~~ 123 (141)
.+.+.|.|.+||.|..|+... ..|... +|.+++.|.... .|.|...+
T Consensus 260 --~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~ 313 (423)
T 2gy5_A 260 --PDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGW 313 (423)
T ss_dssp --TTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTC
T ss_pred --CCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCC
Confidence 456789999999998875311 123211 688899997553 37776443
No 51
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=1.3e-08 Score=71.94 Aligned_cols=67 Identities=24% Similarity=0.712 Sum_probs=14.3
Q ss_pred ccCCCCCCCCCCCCEEeecCCceeEecCCCCcc----CCCCCcCCCcCc-CCCCCCCCEEeeCCCCeeecCCCCCC
Q psy9687 16 NIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYT----GPHCEINIDDCA-PNPCKNGARCVDKVKDYLCECYPGYT 86 (141)
Q Consensus 16 ~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~----g~~c~~~~~~c~-~~~c~~~~~c~~~~~~~~c~C~~g~~ 86 (141)
++++|...++.....|.+..++|.|.|.+ ||. |+.| .++++|. ..+|.. .|.++.++|.|.|.+||.
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~-G~~l~~~~~~C-~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHT-GYRLTEDGRTC-QDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp ----------------------------------------------------CCTT--EEC-----CCEECCTTEE
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCC-CceECCCCCcc-CccceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence 57888877755555898888999999995 997 8899 4899996 456764 599999999999999996
No 52
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.49 E-value=9.1e-08 Score=71.87 Aligned_cols=93 Identities=29% Similarity=0.705 Sum_probs=69.9
Q ss_pred cCCcccccccccCCCCC---CCCCC--CCEEeecCCceeEecCCCCccCCCCCc--CCCcCcCC---CCCCCCEEeeCCC
Q psy9687 6 SQNGLRLCETNIDDCES---GPCLN--GGLCKDLLNNYTCNCQQTGYTGPHCEI--NIDDCAPN---PCKNGARCVDKVK 75 (141)
Q Consensus 6 ~~~~g~~C~~~~~~c~~---~~c~~--~~~C~~~~g~~~c~c~~~g~~g~~c~~--~~~~c~~~---~c~~~~~c~~~~~ 75 (141)
++|.|..|+.+...|.. .+|.+ ++.|... .|.|.+ ||.|..|+. +...|... +|..++.|..
T Consensus 505 ~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~-G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--- 576 (687)
T 3k6s_B 505 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHP-GFEGSACQCERTTEGCLNPRRVECSGRGRCRC--- 576 (687)
T ss_dssp CCEESTTSCEESSCSCEETTEETSHHHHEEEETT----EEEECT-TCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS---
T ss_pred CCccccccccccccccCCCCcCcCCCCCCeEECC----EEEcCC-CCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC---
Confidence 89999999766778874 35877 7888742 899995 999999962 24567643 6888888865
Q ss_pred CeeecCCCCCCCCCCCCCCCCCcCCCCCCCCEEe
Q psy9687 76 DYLCECYPGYTGKTCADDIKECESNPCQYGGTCL 109 (141)
Q Consensus 76 ~~~c~C~~g~~~~~c~~~~~~c~~~~c~~~~~C~ 109 (141)
..|.|.+||.|..|+. ...|. ++|.+++.|+
T Consensus 577 -g~C~C~~Gy~G~~Ce~-c~~C~-~~C~~~g~Cv 607 (687)
T 3k6s_B 577 -NVCECHSGYQLPLCQE-CPGCP-SPCGKYISCA 607 (687)
T ss_dssp -SCBCCSTTCCTTTTCC-CTTSC-CCCTTTHHHH
T ss_pred -CEEECCCCCcCCCCCC-CCCCC-cccCCCCCCC
Confidence 3599999999999963 23563 5788877775
No 53
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.44 E-value=3.6e-07 Score=43.22 Aligned_cols=37 Identities=43% Similarity=1.047 Sum_probs=32.3
Q ss_pred CCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCC
Q psy9687 55 NIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 55 ~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~ 91 (141)
++++|...||.+++.|.+..++|.|.|++||.|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 4677888899999999999999999999999998774
No 54
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.42 E-value=5.9e-07 Score=45.47 Aligned_cols=40 Identities=45% Similarity=1.071 Sum_probs=31.2
Q ss_pred ccCCCCCC---CCCCCCEEe--ecCCceeEecCCCCccCCCCCcCC
Q psy9687 16 NIDDCESG---PCLNGGLCK--DLLNNYTCNCQQTGYTGPHCEINI 56 (141)
Q Consensus 16 ~~~~c~~~---~c~~~~~C~--~~~g~~~c~c~~~g~~g~~c~~~~ 56 (141)
++++|.+. ||.++++|. +..++|.|.|. .||+|..|+..+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~-~G~~G~~Ce~~~ 46 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCV-IGYSGDRCQTRD 46 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECC-TTCCSSSSCCCS
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECC-CCCcCCcCCccC
Confidence 46777776 898888998 67788899998 489998886443
No 55
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.28 E-value=7.5e-07 Score=63.20 Aligned_cols=65 Identities=26% Similarity=0.546 Sum_probs=52.3
Q ss_pred cCcCCCCCCCCEEeeCCCCeeecCCCCCC---CCCCCCCCCCCcC-CCCCCCCEEeecCCCcceecCCCCCC
Q psy9687 58 DCAPNPCKNGARCVDKVKDYLCECYPGYT---GKTCADDIKECES-NPCQYGGTCLEHSNMSLYQRSDLPAL 125 (141)
Q Consensus 58 ~c~~~~c~~~~~c~~~~~~~~c~C~~g~~---~~~c~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~~~~~ 125 (141)
+|...++.....|.++.++|.|.|++||. +..| .++++|.. .+|.. .|.+..++|.|.|...+..
T Consensus 2 eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C-~dideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~ 70 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRC-EDIDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQL 70 (400)
T ss_dssp CTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCE-EECCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCC
T ss_pred cccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcc-cCchhhhccCCCCC--ccCCCccceeeeccccccc
Confidence 56555666667999999999999999997 7788 49999974 46754 8999999999998765543
No 56
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.27 E-value=7.8e-08 Score=60.08 Aligned_cols=82 Identities=18% Similarity=0.431 Sum_probs=53.2
Q ss_pred eeccCCc----ccccccccCC--CCCCC--C--CCCCEEeecCC----ceeEecCCCCc---------------------
Q psy9687 3 VLWSQNG----LRLCETNIDD--CESGP--C--LNGGLCKDLLN----NYTCNCQQTGY--------------------- 47 (141)
Q Consensus 3 ~~~~~~~----g~~C~~~~~~--c~~~~--c--~~~~~C~~~~g----~~~c~c~~~g~--------------------- 47 (141)
.|.++|. |+.|+ ++++ |...+ | ..++.|.+..+ .|.|.|.+ ||
T Consensus 27 ~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~-G~~~~~~C~~C~~~~~~~y~C~C 104 (162)
T 1uzk_A 27 DCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSL-GKAWGTPCEMCPAVNTSEYKILC 104 (162)
T ss_dssp ECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHTTT-CCEETTTTEECCCTTSHHHHHHC
T ss_pred eCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCC-CCCcCCCcccCCCCCCCCceeEC
Confidence 3678887 88997 6766 75432 3 23567777655 56666652 44
Q ss_pred ------cCC----CCCcCCCcCcC--CCCCCCCEEeeCCCCeeecCCCCCCCC
Q psy9687 48 ------TGP----HCEINIDDCAP--NPCKNGARCVDKVKDYLCECYPGYTGK 88 (141)
Q Consensus 48 ------~g~----~c~~~~~~c~~--~~c~~~~~c~~~~~~~~c~C~~g~~~~ 88 (141)
.+. .| .++++|.. .+|.+ +.|+++.++|.|.|++||.+.
T Consensus 105 ~~g~G~~~~~~~~~c-~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~ 155 (162)
T 1uzk_A 105 PGGEGFRPNPITVIL-EDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLN 155 (162)
T ss_dssp TTCTTEEECTTTCCE-EECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBC
T ss_pred CCCCCcccCCCCCcc-CccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCC
Confidence 332 23 47788864 35764 699999999999999999864
No 57
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.26 E-value=2.5e-07 Score=48.15 Aligned_cols=37 Identities=35% Similarity=0.800 Sum_probs=31.0
Q ss_pred ccCCCCCCCCCCC--CEEeecCCceeEecCCCCcc-CCCCC
Q psy9687 16 NIDDCESGPCLNG--GLCKDLLNNYTCNCQQTGYT-GPHCE 53 (141)
Q Consensus 16 ~~~~c~~~~c~~~--~~C~~~~g~~~c~c~~~g~~-g~~c~ 53 (141)
++++|...||.++ +.|.+..++|.|.|.+ ||+ |..|+
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~-Gy~~G~~C~ 49 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQ-GYRISLDGT 49 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEECCT-TEEEEECSS
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeECCC-CCccCCCCC
Confidence 5678888889888 7899888889999984 898 88885
No 58
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.24 E-value=2.3e-06 Score=43.25 Aligned_cols=40 Identities=30% Similarity=0.836 Sum_probs=32.8
Q ss_pred CCcCcCC---CCCCCCEEe--eCCCCeeecCCCCCCCCCCCCCCC
Q psy9687 56 IDDCAPN---PCKNGARCV--DKVKDYLCECYPGYTGKTCADDIK 95 (141)
Q Consensus 56 ~~~c~~~---~c~~~~~c~--~~~~~~~c~C~~g~~~~~c~~~~~ 95 (141)
+++|... ||.+++.|. +..+.|.|.|++||.|..|+.++.
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCc
Confidence 4566655 899999998 778899999999999999875543
No 59
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.22 E-value=1.9e-06 Score=42.05 Aligned_cols=36 Identities=44% Similarity=1.014 Sum_probs=25.1
Q ss_pred CCCCC---CCCCCCEEe--ecCCceeEecCCCCccCCCCCcC
Q psy9687 19 DCESG---PCLNGGLCK--DLLNNYTCNCQQTGYTGPHCEIN 55 (141)
Q Consensus 19 ~c~~~---~c~~~~~C~--~~~g~~~c~c~~~g~~g~~c~~~ 55 (141)
+|.+. ||.++++|. +..++|+|.|. .||+|..|+.+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~-~G~~G~~Ce~~ 42 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCV-IGYSGDRCQTR 42 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECC-TTEETTTTCEE
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcC-CCCcCCcCCcc
Confidence 34444 788888886 45667888888 48888887543
No 60
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.18 E-value=9.3e-07 Score=46.41 Aligned_cols=42 Identities=36% Similarity=0.722 Sum_probs=32.5
Q ss_pred CCCCCCCCCCCCEEee-----cCCceeEecCCCCccCCCCCcCCCcCc
Q psy9687 18 DDCESGPCLNGGLCKD-----LLNNYTCNCQQTGYTGPHCEINIDDCA 60 (141)
Q Consensus 18 ~~c~~~~c~~~~~C~~-----~~g~~~c~c~~~g~~g~~c~~~~~~c~ 60 (141)
++|...||.++++|.+ ..+.|.|.|. .||+|..|+.+++.+.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~-~Gf~G~~Ce~~i~~~~ 53 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQ-PGFTGARCTENVPMKV 53 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECC-TTEESTTSCEECCSSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECC-CCCcCCccCcCcCccc
Confidence 4577788999899986 4567899998 4999999976666554
No 61
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.15 E-value=2.1e-06 Score=41.84 Aligned_cols=32 Identities=31% Similarity=0.822 Sum_probs=27.4
Q ss_pred CCCCCCEEe--eCCCCeeecCCCCCCCCCCCCCC
Q psy9687 63 PCKNGARCV--DKVKDYLCECYPGYTGKTCADDI 94 (141)
Q Consensus 63 ~c~~~~~c~--~~~~~~~c~C~~g~~~~~c~~~~ 94 (141)
||.+++.|. +..+.|.|.|++||.|..|+.++
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 898999997 57788999999999999886554
No 62
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.15 E-value=5.5e-06 Score=59.27 Aligned_cols=85 Identities=28% Similarity=0.663 Sum_probs=58.2
Q ss_pred eeccCCcccccccccC----------CCC-CCCCCCCCEEeecCCceeEecCCCCccCCCCCcCC------CcCcC-CCC
Q psy9687 3 VLWSQNGLRLCETNID----------DCE-SGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINI------DDCAP-NPC 64 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~----------~c~-~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~------~~c~~-~~c 64 (141)
.|.++|.|..|+.+.+ +|. ..+|.+++.|. .+.+.|.|.+ +|.|..|+..- ..|.. -+|
T Consensus 219 ~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~-G~~G~~C~~~C~~G~~G~~C~~~C~C 295 (423)
T 2gy5_A 219 ICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCAT-GWKGLQCNEACHPGFYGPDCKLRCSC 295 (423)
T ss_dssp ECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCB-TCBSGGGCBCCCTTBCSBTTCCBCCC
T ss_pred eCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCC-CcccccccCccCCCCcCCcccccccC
Confidence 4788999999974321 343 24577777784 4678999994 99998885311 11221 157
Q ss_pred CCCCEEeeCCCCeeecCCCCCCCCCCCCC
Q psy9687 65 KNGARCVDKVKDYLCECYPGYTGKTCADD 93 (141)
Q Consensus 65 ~~~~~c~~~~~~~~c~C~~g~~~~~c~~~ 93 (141)
.+++.|.+.. .|.|++||.|..|+..
T Consensus 296 ~ngg~C~~~~---~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 296 NNGEMCDRFQ---GCLCSPGWQGLQCERE 321 (423)
T ss_dssp TTCCEEETTT---EEECCTTCBSTTSCBC
T ss_pred CCCCEecCCC---ceECCCCCcCCCCccC
Confidence 7788897654 3999999999998644
No 63
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.13 E-value=3e-07 Score=66.46 Aligned_cols=75 Identities=29% Similarity=0.755 Sum_probs=32.6
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCC
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECY 82 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~ 82 (141)
.|..+|.|..|+ +++|.. +|.+ +.|... +.|.|.+ +|+|..|+ +..|.. +|.+++.|... +.|.|.
T Consensus 380 ~C~~~~~g~~c~--~~~C~~-~C~n-G~C~~~---~~C~C~~-G~~G~~C~--~~~C~~-~C~~~g~C~~~---~~C~C~ 445 (463)
T 2wg3_C 380 ECRATVQPAQTL--TSECSR-LCRN-GYCTPT---GKCCCSP-GWEGDFCR--TAKCEP-ACRHGGVCVRP---NKCLCK 445 (463)
T ss_dssp GGCCCCCCCCCC--CCHHHH-HCCS-EEECTT---SCEEECT-TEESTTSC--EECC-----------------------
T ss_pred cCCCCCcCCCCc--cccccC-CCCC-CccCCC---CeECCCC-CcCCCcCC--cCcCCC-CCCCCCEECCC---CEEECC
Confidence 466777777774 455754 4776 688653 3789984 89998884 456765 78888888654 579999
Q ss_pred CCCCCCCCC
Q psy9687 83 PGYTGKTCA 91 (141)
Q Consensus 83 ~g~~~~~c~ 91 (141)
+||.|..|+
T Consensus 446 ~G~~G~~C~ 454 (463)
T 2wg3_C 446 KGYLGPQCE 454 (463)
T ss_dssp ---------
T ss_pred CCcccCCCC
Confidence 999888775
No 64
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.10 E-value=1.2e-06 Score=45.90 Aligned_cols=43 Identities=30% Similarity=0.770 Sum_probs=35.5
Q ss_pred CcCcCCCCCCCCEEee-----CCCCeeecCCCCCCCCCCCCCCCCCcC
Q psy9687 57 DDCAPNPCKNGARCVD-----KVKDYLCECYPGYTGKTCADDIKECES 99 (141)
Q Consensus 57 ~~c~~~~c~~~~~c~~-----~~~~~~c~C~~g~~~~~c~~~~~~c~~ 99 (141)
++|...||.+++.|++ ..+.|.|.|++||.|..|+.+++.+..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 4566778999999986 567899999999999999877777644
No 65
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.08 E-value=6.9e-07 Score=63.06 Aligned_cols=66 Identities=23% Similarity=0.478 Sum_probs=12.1
Q ss_pred CCCcCcCCCCCCCCEEeeCCCCeeecCCCCCC----CCCCCCCCCCCc-CCCCCCCCEEeecCCCcceecCCCC
Q psy9687 55 NIDDCAPNPCKNGARCVDKVKDYLCECYPGYT----GKTCADDIKECE-SNPCQYGGTCLEHSNMSLYQRSDLP 123 (141)
Q Consensus 55 ~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~----~~~c~~~~~~c~-~~~c~~~~~C~~~~~~~~~~~~~~~ 123 (141)
++++|...++.....|.+..++|.|.|++||. +..| .++++|. ..+|.. .|.+..++|.|.|...+
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~--~C~~~~g~~~C~C~~g~ 72 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYCSQ--GCTNSEGAFQCWCEAGY 72 (386)
T ss_dssp ---------------------------------------------------CCTT--EEC-----CCEECCTTE
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc-CccceeCCcCcccC--cCCCCCCCCeEEECCCc
Confidence 45677766655555888888889999999997 7788 6999996 457865 49999999999987554
No 66
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.07 E-value=2.2e-06 Score=55.90 Aligned_cols=80 Identities=26% Similarity=0.547 Sum_probs=58.5
Q ss_pred eeccCCcccccccccC---------CCC----CCCCCCCCEEeecCCceeEecCCCC------ccCCCCCcCCCcCcCC-
Q psy9687 3 VLWSQNGLRLCETNID---------DCE----SGPCLNGGLCKDLLNNYTCNCQQTG------YTGPHCEINIDDCAPN- 62 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~---------~c~----~~~c~~~~~C~~~~g~~~c~c~~~g------~~g~~c~~~~~~c~~~- 62 (141)
.|.++|.|..|+-..+ .|. ..+|..++.|.. ..|.|.+ + |.|..|+.+...|...
T Consensus 110 ~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~-gw~~~~~~~G~~Ce~~~~~C~~~~ 184 (217)
T 2p28_B 110 RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHT-SDVPGKLIYGQYCECDTINCERYN 184 (217)
T ss_dssp EECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECC-CCSTTCCEESTTSCEESSCSCEET
T ss_pred ECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCC-CCCCcccEECCCcccCCccCCCCC
Confidence 4789999999974432 354 245777888874 2799995 7 7899997555667543
Q ss_pred --CCCCC--CEEeeCCCCeeecCCCCCCCCCCC
Q psy9687 63 --PCKNG--ARCVDKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 63 --~c~~~--~~c~~~~~~~~c~C~~g~~~~~c~ 91 (141)
+|..+ +.|.. + .|.|.+||.|..|+
T Consensus 185 g~~C~~~~~G~C~~--g--~C~C~~G~~G~~C~ 213 (217)
T 2p28_B 185 GQVCGGPGRGLCFC--G--KCRCHPGFEGSACQ 213 (217)
T ss_dssp TEETTCTTTEEEET--T--EEEECTTEESTTSC
T ss_pred CCCCCCCCCcEEeC--C--eeECCCCCccCCcC
Confidence 57776 88874 2 69999999998875
No 67
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.03 E-value=1.3e-07 Score=58.07 Aligned_cols=48 Identities=38% Similarity=0.883 Sum_probs=39.6
Q ss_pred eeEecCCCCcc---CCCCCcCCCcCcC--CCCCCCCEEeeCCCCeeecCCCCCCCC
Q psy9687 38 YTCNCQQTGYT---GPHCEINIDDCAP--NPCKNGARCVDKVKDYLCECYPGYTGK 88 (141)
Q Consensus 38 ~~c~c~~~g~~---g~~c~~~~~~c~~--~~c~~~~~c~~~~~~~~c~C~~g~~~~ 88 (141)
|.|.|.+ ||. |..|+ ++++|.. .+|.+ +.|+++.++|.|.|++||.+.
T Consensus 88 ~~C~C~~-Gy~~~~g~~C~-dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~ 140 (147)
T 2w86_A 88 VDPICGK-GYSRIKGTQCE-DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLD 140 (147)
T ss_dssp CCTTTCT-TEEEEETTEEE-ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBC
T ss_pred CcccCCC-ccccCCCCccC-ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccC
Confidence 6778984 994 88996 8999974 44874 599999999999999999864
No 68
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.98 E-value=1.2e-05 Score=61.65 Aligned_cols=54 Identities=26% Similarity=0.495 Sum_probs=40.4
Q ss_pred CEEeeCCCCeeecCCCCCC---CCCCCCCCCCCcCCCCCCCCEEeecCCCcceecCCCC
Q psy9687 68 ARCVDKVKDYLCECYPGYT---GKTCADDIKECESNPCQYGGTCLEHSNMSLYQRSDLP 123 (141)
Q Consensus 68 ~~c~~~~~~~~c~C~~g~~---~~~c~~~~~~c~~~~c~~~~~C~~~~~~~~~~~~~~~ 123 (141)
..|.++.++|.|.|++||. +..|. ++++|.. +...+..|++..++|.|.|...+
T Consensus 324 ~~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy 380 (791)
T 3m0c_C 324 HVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD-PDTCSQLCVNLEGGYKCQCEEGF 380 (791)
T ss_dssp SEEEECSBSEEEECCTTCEEETTTEEE-CCCCCSS-SSSCTTTCCBCSSCBCCCCCSSE
T ss_pred ccccCCCCCcccCCCCCCccCCCCccc-cCcccCC-CCCCCCeeecCCCCceeecCCCC
Confidence 4788888889999999984 66774 8888863 33345688888888888876544
No 69
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.98 E-value=1e-05 Score=61.27 Aligned_cols=67 Identities=31% Similarity=0.829 Sum_probs=50.6
Q ss_pred cCCCCCCCCCCCCEEeecCCceeEecCCCCcc---CCCCCcCCCcCc-CCCCCCCCEEeeCCCCeeecCCCCCCC
Q psy9687 17 IDDCESGPCLNGGLCKDLLNNYTCNCQQTGYT---GPHCEINIDDCA-PNPCKNGARCVDKVKDYLCECYPGYTG 87 (141)
Q Consensus 17 ~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~---g~~c~~~~~~c~-~~~c~~~~~c~~~~~~~~c~C~~g~~~ 87 (141)
+++|...+......|.++.++|.|.|.+ ||. ++.|+ ++++|. ..+|. ..|.++.++|.|.|++||.+
T Consensus 294 ~~eC~~~~~~C~~~C~~~~~~~~C~C~~-G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~ 364 (699)
T 1n7d_A 294 TNECLDNNGGCSHVCNDLKIGYECLCPD-GFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 364 (699)
T ss_dssp CCCTTSSTTTSCTTCCCCTTCCCCCCCS-SSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBC
T ss_pred cccccccccCcCCCcccCCCCcEEeCCC-CeEcCCCCccc-CccccCCCCccc--cccccCCCCeeeeeeccccc
Confidence 4455433211124799999999999995 998 77896 899997 45564 47999999999999999964
No 70
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.98 E-value=7.5e-06 Score=40.05 Aligned_cols=36 Identities=47% Similarity=1.074 Sum_probs=26.0
Q ss_pred ccCCCCC---CCCCCCCEEeecC--CceeEecCCCCccCCCCC
Q psy9687 16 NIDDCES---GPCLNGGLCKDLL--NNYTCNCQQTGYTGPHCE 53 (141)
Q Consensus 16 ~~~~c~~---~~c~~~~~C~~~~--g~~~c~c~~~g~~g~~c~ 53 (141)
++++|.. .||.+ +.|.... +.|.|.|.+ ||+|..|+
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~-GytG~~Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEV-GYTGVRCE 42 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECT-TCSSTTSC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCC-CCccCCCC
Confidence 4566766 77887 6887643 568888884 88888885
No 71
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.97 E-value=1.3e-06 Score=45.41 Aligned_cols=37 Identities=27% Similarity=0.764 Sum_probs=32.8
Q ss_pred CCCcCcCCCCCCC--CEEeeCCCCeeecCCCCCC-CCCCC
Q psy9687 55 NIDDCAPNPCKNG--ARCVDKVKDYLCECYPGYT-GKTCA 91 (141)
Q Consensus 55 ~~~~c~~~~c~~~--~~c~~~~~~~~c~C~~g~~-~~~c~ 91 (141)
.+++|...||.++ +.|.+..++|.|.|++||. |..|+
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 5678888899988 7999999999999999999 98874
No 72
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.93 E-value=1e-05 Score=62.16 Aligned_cols=55 Identities=36% Similarity=0.979 Sum_probs=45.6
Q ss_pred CEEeecCCceeEecCCCCcc---CCCCCcCCCcCc-CCCCCCCCEEeeCCCCeeecCCCCCCC
Q psy9687 29 GLCKDLLNNYTCNCQQTGYT---GPHCEINIDDCA-PNPCKNGARCVDKVKDYLCECYPGYTG 87 (141)
Q Consensus 29 ~~C~~~~g~~~c~c~~~g~~---g~~c~~~~~~c~-~~~c~~~~~c~~~~~~~~c~C~~g~~~ 87 (141)
..|.++.++|.|.|.+ ||. |+.|. ++++|. ..+| ...|.++.++|.|.|++||..
T Consensus 324 ~~C~~~~~~y~C~C~~-Gy~l~~g~~C~-dideC~~~~~C--~~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 324 HVCNDLKIGYECLCPD-GFQLVAQRRCE-DIDECQDPDTC--SQLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp SEEEECSBSEEEECCT-TCEEETTTEEE-CCCCCSSSSSC--TTTCCBCSSCBCCCCCSSEEC
T ss_pred ccccCCCCCcccCCCC-CCccCCCCccc-cCcccCCCCCC--CCeeecCCCCceeecCCCCEe
Confidence 3899999999999995 995 78885 899996 3334 458999999999999999953
No 73
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.88 E-value=6.4e-05 Score=57.00 Aligned_cols=67 Identities=24% Similarity=0.510 Sum_probs=49.4
Q ss_pred CCCcCcCCCCCCCCEEeeCCCCeeecCCCCCC---CCCCCCCCCCCcC-CCCCCCCEEeecCCCcceecCCCCC
Q psy9687 55 NIDDCAPNPCKNGARCVDKVKDYLCECYPGYT---GKTCADDIKECES-NPCQYGGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 55 ~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~---~~~c~~~~~~c~~-~~c~~~~~C~~~~~~~~~~~~~~~~ 124 (141)
++++|..........|.++.++|.|.|++||. +..|. ++++|.. .+|. ..|++..++|.|.|...+.
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~~~~C~--~~C~n~~g~y~C~C~~G~~ 363 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQ 363 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSSSSSCT--TTCCBCSSCBCCCCCSSCB
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCccc-CccccCCCCccc--cccccCCCCeeeeeecccc
Confidence 44556533222235788999999999999997 66784 8999973 4674 5899999999998875544
No 74
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.79 E-value=1.8e-05 Score=38.67 Aligned_cols=36 Identities=33% Similarity=0.856 Sum_probs=28.2
Q ss_pred CCcCcC---CCCCCCCEEeeCC--CCeeecCCCCCCCCCCCC
Q psy9687 56 IDDCAP---NPCKNGARCVDKV--KDYLCECYPGYTGKTCAD 92 (141)
Q Consensus 56 ~~~c~~---~~c~~~~~c~~~~--~~~~c~C~~g~~~~~c~~ 92 (141)
+++|.. .||.+ +.|.... +.|.|.|++||+|.+|+.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 455655 78988 7998643 679999999999998853
No 75
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=97.48 E-value=5.8e-05 Score=55.42 Aligned_cols=13 Identities=38% Similarity=1.224 Sum_probs=0.0
Q ss_pred eecCCCCCCCCCC
Q psy9687 78 LCECYPGYTGKTC 90 (141)
Q Consensus 78 ~c~C~~g~~~~~c 90 (141)
.|.|++||.|..|
T Consensus 511 ~C~C~~G~~G~~C 523 (525)
T 4aqs_A 511 QCSCLPHMIGRQC 523 (525)
T ss_dssp -------------
T ss_pred eeECCCCCcCCCC
Confidence 3566666665555
No 76
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.47 E-value=7e-05 Score=48.84 Aligned_cols=85 Identities=27% Similarity=0.587 Sum_probs=61.2
Q ss_pred CCCCCCEEeecCCceeEecCCCCccCCCCCcCCC---------cCc----CCCCCCCCEEeeCCCCeeecCCCC------
Q psy9687 24 PCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINID---------DCA----PNPCKNGARCVDKVKDYLCECYPG------ 84 (141)
Q Consensus 24 ~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~~---------~c~----~~~c~~~~~c~~~~~~~~c~C~~g------ 84 (141)
.|..++.|.. ..|.|.+ ||.|..|+.... .|. ..+|..++.|.. ..|.|.++
T Consensus 97 ~Csg~G~C~~----g~C~C~~-G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~ 167 (217)
T 2p28_B 97 LCHGKGFLEC----GICRCDT-GYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKL 167 (217)
T ss_dssp TTTTSEEEET----TEEEECT-TEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCC
T ss_pred ccCCCceEEC----CEEECCC-CccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCccc
Confidence 3777778864 3899995 999999864322 354 345778888873 25999999
Q ss_pred CCCCCCCCCCCCCcCC---CCCCC--CEEeecCCCcceecCC
Q psy9687 85 YTGKTCADDIKECESN---PCQYG--GTCLEHSNMSLYQRSD 121 (141)
Q Consensus 85 ~~~~~c~~~~~~c~~~---~c~~~--~~C~~~~~~~~~~~~~ 121 (141)
|.|..|+.+...|... +|..+ +.|.. ..|.|..
T Consensus 168 ~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~ 205 (217)
T 2p28_B 168 IYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHP 205 (217)
T ss_dssp EESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECT
T ss_pred EECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCC
Confidence 6899997666778664 68887 99974 2677754
No 77
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.43 E-value=0.0001 Score=37.07 Aligned_cols=33 Identities=42% Similarity=1.143 Sum_probs=26.0
Q ss_pred CCCCCCCCEEe--ecCCceeEecCCCCccCCCCCcC
Q psy9687 22 SGPCLNGGLCK--DLLNNYTCNCQQTGYTGPHCEIN 55 (141)
Q Consensus 22 ~~~c~~~~~C~--~~~g~~~c~c~~~g~~g~~c~~~ 55 (141)
..||.++++|. ...+.|.|.|.+ ||+|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~-GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVV-GYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECT-TEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCC-CCcCCCCCcC
Confidence 46788889997 556778999994 9999999643
No 78
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.24 E-value=0.00013 Score=36.74 Aligned_cols=33 Identities=27% Similarity=0.820 Sum_probs=27.5
Q ss_pred CCCCCCCCEEe--eCCCCeeecCCCCCCCCCCCCC
Q psy9687 61 PNPCKNGARCV--DKVKDYLCECYPGYTGKTCADD 93 (141)
Q Consensus 61 ~~~c~~~~~c~--~~~~~~~c~C~~g~~~~~c~~~ 93 (141)
..||.+++.|. +..+.|.|.|++||.|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 46788889997 5677899999999999998644
No 79
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.23 E-value=0.00013 Score=45.14 Aligned_cols=40 Identities=28% Similarity=0.994 Sum_probs=30.2
Q ss_pred CcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCCCcC
Q psy9687 59 CAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADDIKECES 99 (141)
Q Consensus 59 c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~c~~ 99 (141)
|...+|..++.|.+..+.|.|.|++||.|..|+ .+++|..
T Consensus 122 c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce-~~~~c~~ 161 (162)
T 1g1s_A 122 CQDMSCSKQGECLETIGNYTCSCYPGFYGPECE-YVRDDDD 161 (162)
T ss_dssp CCTTGGGGSEEEEECSSSEEEEECTTEESTTSC-EECC---
T ss_pred CcCCCCCCCCEEecCCCCceEeCCCCCcCcccc-cCcccCC
Confidence 445677778899999899999999999999995 5567754
No 80
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.95 E-value=0.00063 Score=50.29 Aligned_cols=38 Identities=39% Similarity=1.093 Sum_probs=33.7
Q ss_pred cCCCCCCCCCCCCEEee-cCCceeEecC-CCCccCCCCCcC
Q psy9687 17 IDDCESGPCLNGGLCKD-LLNNYTCNCQ-QTGYTGPHCEIN 55 (141)
Q Consensus 17 ~~~c~~~~c~~~~~C~~-~~g~~~c~c~-~~g~~g~~c~~~ 55 (141)
+++|.++||.+++.|.+ ..+.|.|.|. . ||+|..|+..
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~-G~~G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRT-GYSGPNCTIP 41 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTS-SEETTTTCEE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCC-CcCCCCCCCC
Confidence 46788999999999999 8889999999 6 9999999753
No 81
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.94 E-value=0.00029 Score=43.57 Aligned_cols=24 Identities=25% Similarity=0.481 Sum_probs=11.9
Q ss_pred CcCCCCCCCCEEeecCCCcceecC
Q psy9687 97 CESNPCQYGGTCLEHSNMSLYQRS 120 (141)
Q Consensus 97 c~~~~c~~~~~C~~~~~~~~~~~~ 120 (141)
|...+|.+++.|.+..+.+.|.|.
T Consensus 122 c~~~~C~~~g~C~~~~~~~~c~C~ 145 (162)
T 1g1s_A 122 CQDMSCSKQGECLETIGNYTCSCY 145 (162)
T ss_dssp CCTTGGGGSEEEEECSSSEEEEEC
T ss_pred CcCCCCCCCCEEecCCCCceEeCC
Confidence 333445555555555555555443
No 82
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.88 E-value=0.00078 Score=33.59 Aligned_cols=30 Identities=40% Similarity=0.888 Sum_probs=23.3
Q ss_pred CCCCCCCEEee----cCCceeEecCCCCccCCCCC
Q psy9687 23 GPCLNGGLCKD----LLNNYTCNCQQTGYTGPHCE 53 (141)
Q Consensus 23 ~~c~~~~~C~~----~~g~~~c~c~~~g~~g~~c~ 53 (141)
.||.++++|.. ..+.|.|.|.+ +|+|..|+
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~-Gf~G~~Ce 47 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAI-GFMGQRCE 47 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCT-TEESTTSC
T ss_pred CcCCCCCEEecCccCCCCCEEEECCC-CCcCCCCc
Confidence 47888889986 24568899984 89998886
No 83
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.81 E-value=0.00087 Score=33.83 Aligned_cols=28 Identities=32% Similarity=0.827 Sum_probs=19.3
Q ss_pred EEeecCCceeEecCCCCcc----CCCCCcCCCcC
Q psy9687 30 LCKDLLNNYTCNCQQTGYT----GPHCEINIDDC 59 (141)
Q Consensus 30 ~C~~~~g~~~c~c~~~g~~----g~~c~~~~~~c 59 (141)
.|.++.|+|.|.|.+ ||. ++.|. ++++|
T Consensus 14 ~C~nt~Gsy~C~C~~-Gy~L~~d~~~C~-didec 45 (55)
T 2jkh_L 14 FCHEEQNSVVCSCAR-GYTLADNGKACI-PTGPY 45 (55)
T ss_dssp EEEEETTEEEEECCT-TEEECTTSSCEE-ESSSS
T ss_pred EeEcCCCCeEEeCCC-CCEECCCCCeec-cCccc
Confidence 788888888888884 875 44553 55544
No 84
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.80 E-value=0.0014 Score=32.61 Aligned_cols=31 Identities=35% Similarity=1.014 Sum_probs=22.0
Q ss_pred ccCCCCC----------CCCCCCCEEeecCCceeEecCCCCccC
Q psy9687 16 NIDDCES----------GPCLNGGLCKDLLNNYTCNCQQTGYTG 49 (141)
Q Consensus 16 ~~~~c~~----------~~c~~~~~C~~~~g~~~c~c~~~g~~g 49 (141)
++++|.. .+|. +.|.++.|+|.|.|.+ ||.+
T Consensus 3 DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~-Gy~~ 43 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRP-GYEL 43 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECST-TCEE
T ss_pred ccccccCcccccccccCCCCC--CEeECCCCCeEEECCC-CCeE
Confidence 5667754 3565 3888888888888884 8763
No 85
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.78 E-value=0.00059 Score=34.46 Aligned_cols=30 Identities=30% Similarity=0.686 Sum_probs=23.1
Q ss_pred CEEeeCCCCeeecCCCCCC----CCCCCCCCCCCc
Q psy9687 68 ARCVDKVKDYLCECYPGYT----GKTCADDIKECE 98 (141)
Q Consensus 68 ~~c~~~~~~~~c~C~~g~~----~~~c~~~~~~c~ 98 (141)
..|.++.++|.|.|++||. +..| .++++|.
T Consensus 13 ~~C~nt~Gsy~C~C~~Gy~L~~d~~~C-~didec~ 46 (55)
T 2jkh_L 13 QFCHEEQNSVVCSCARGYTLADNGKAC-IPTGPYP 46 (55)
T ss_dssp SEEEEETTEEEEECCTTEEECTTSSCE-EESSSSC
T ss_pred cEeEcCCCCeEEeCCCCCEECCCCCee-ccCcccc
Confidence 4899999999999999995 3445 3666653
No 86
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.77 E-value=0.0013 Score=48.93 Aligned_cols=37 Identities=35% Similarity=0.972 Sum_probs=32.1
Q ss_pred cCCCCCCCCCCCCEEee-cCCceeEecC-CCCccCCCCCc
Q psy9687 17 IDDCESGPCLNGGLCKD-LLNNYTCNCQ-QTGYTGPHCEI 54 (141)
Q Consensus 17 ~~~c~~~~c~~~~~C~~-~~g~~~c~c~-~~g~~g~~c~~ 54 (141)
+++|.++||.+++.|.. ..+.|.|.|. + ||+|..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~-G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRT-GFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTS-SEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCC-CccCCCCCC
Confidence 46799999999999995 4578999998 6 999999974
No 87
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.73 E-value=0.00072 Score=33.72 Aligned_cols=30 Identities=37% Similarity=0.863 Sum_probs=24.4
Q ss_pred CCCCCCCEEee----CCCCeeecCCCCCCCCCCC
Q psy9687 62 NPCKNGARCVD----KVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 62 ~~c~~~~~c~~----~~~~~~c~C~~g~~~~~c~ 91 (141)
.||.+++.|.. ..+.|.|.|++||.|..|+
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 46778889975 3457899999999999885
No 88
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.66 E-value=0.0014 Score=34.73 Aligned_cols=40 Identities=25% Similarity=0.672 Sum_probs=26.9
Q ss_pred ccCCCCCCC--CCCCCEEeecCC-ceeEecCCCCcc----CCCCCcCCCcC
Q psy9687 16 NIDDCESGP--CLNGGLCKDLLN-NYTCNCQQTGYT----GPHCEINIDDC 59 (141)
Q Consensus 16 ~~~~c~~~~--c~~~~~C~~~~g-~~~c~c~~~g~~----g~~c~~~~~~c 59 (141)
++++|.... |.+ .|.++.+ +|.|.|.. ||. ++.|. ++++|
T Consensus 4 d~~eC~~~nggC~h--~C~n~~g~s~~C~C~~-Gy~L~~D~~tC~-d~dec 50 (69)
T 1kli_L 4 DQLICVNENGGCEQ--YCSDHTGTKRSCRCHE-GYSLLADGVSCT-PTVEY 50 (69)
T ss_dssp CCCCTTSGGGGCSS--EEEEETTTEEEEECCT-TEEECTTSSCEE-ECSSS
T ss_pred ccccccCCCCCcCC--EeEcCCCCCEEEeCCC-CCeECCCCCccc-Ccccc
Confidence 667776443 543 7888888 78999984 885 55663 55544
No 89
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.56 E-value=0.0064 Score=35.91 Aligned_cols=32 Identities=47% Similarity=1.028 Sum_probs=25.6
Q ss_pred CCCCCCEEeecC--Cce-eEecCCCCccCCCCCcCC
Q psy9687 24 PCLNGGLCKDLL--NNY-TCNCQQTGYTGPHCEINI 56 (141)
Q Consensus 24 ~c~~~~~C~~~~--g~~-~c~c~~~g~~g~~c~~~~ 56 (141)
||.+++.|.+.. ..+ .|.|.+ +|+|..|+.++
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~-g~~G~~Ce~~~ 36 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPK-KFGGQHCEIDK 36 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCT-TEESTTSCEES
T ss_pred CCCCcCCcCCCcccCCCCCccCCC-CCCCccccccC
Confidence 688999998873 445 999995 99999997544
No 90
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.48 E-value=0.0008 Score=45.43 Aligned_cols=40 Identities=25% Similarity=0.675 Sum_probs=30.1
Q ss_pred ccCCCC--CCCCCCCCEEeecCCceeEecCCCCcc--CCCCCcCCC
Q psy9687 16 NIDDCE--SGPCLNGGLCKDLLNNYTCNCQQTGYT--GPHCEINID 57 (141)
Q Consensus 16 ~~~~c~--~~~c~~~~~C~~~~g~~~c~c~~~g~~--g~~c~~~~~ 57 (141)
++|+|. .++|..++.|.|+.|+|.|.|.+ ||. |..|. +++
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~-Gy~GnG~~C~-d~d 47 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVA-NYTGNGRQCV-AEG 47 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECT-TEEECSSSEE-ETT
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCC-CCCCCCCcCC-CCC
Confidence 678886 46798889999999999999995 997 56774 443
No 91
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=96.43 E-value=0.00062 Score=49.28 Aligned_cols=44 Identities=34% Similarity=0.854 Sum_probs=13.2
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCC
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCE 53 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~ 53 (141)
.|.++|+|..|+ ++.|.+ +|.+++.|... +.|.|.+ +|.|..|+
T Consensus 411 ~C~~G~~G~~C~--~~~C~~-~C~~~g~C~~~---~~C~C~~-G~~G~~C~ 454 (463)
T 2wg3_C 411 CCSPGWEGDFCR--TAKCEP-ACRHGGVCVRP---NKCLCKK-GYLGPQCE 454 (463)
T ss_dssp EECTTEESTTSC--EECC---------------------------------
T ss_pred CCCCCcCCCcCC--cCcCCC-CCCCCCEECCC---CEEECCC-CcccCCCC
Confidence 588999999995 567877 89999999864 5999994 99999996
No 92
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.36 E-value=0.0034 Score=33.42 Aligned_cols=34 Identities=15% Similarity=0.464 Sum_probs=26.4
Q ss_pred ccCCCCC--CCCCCCCEEeecCCceeEecCCCCccC
Q psy9687 16 NIDDCES--GPCLNGGLCKDLLNNYTCNCQQTGYTG 49 (141)
Q Consensus 16 ~~~~c~~--~~c~~~~~C~~~~g~~~c~c~~~g~~g 49 (141)
++++|.. .+|..++.|+|+.|+|.|.+...+|.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 6788875 458877899999999999865446653
No 93
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.32 E-value=0.002 Score=34.10 Aligned_cols=42 Identities=24% Similarity=0.488 Sum_probs=27.8
Q ss_pred CCCcCcCCCCCCCCEEeeCCC-CeeecCCCCCC----CCCCCCCCCCC
Q psy9687 55 NIDDCAPNPCKNGARCVDKVK-DYLCECYPGYT----GKTCADDIKEC 97 (141)
Q Consensus 55 ~~~~c~~~~c~~~~~c~~~~~-~~~c~C~~g~~----~~~c~~~~~~c 97 (141)
++++|....-.....|+++.+ +|.|.|++||. +..| .++++|
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC-~d~dec 50 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSC-TPTVEY 50 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCE-EECSSS
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcc-cCcccc
Confidence 566775322223457999998 79999999995 3445 356555
No 94
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.31 E-value=0.0042 Score=30.79 Aligned_cols=24 Identities=38% Similarity=0.966 Sum_probs=19.8
Q ss_pred CCCCCCCEEeeCCCCeeecCCCCCCC
Q psy9687 62 NPCKNGARCVDKVKDYLCECYPGYTG 87 (141)
Q Consensus 62 ~~c~~~~~c~~~~~~~~c~C~~g~~~ 87 (141)
.+|. ..|.++.++|.|.|++||.+
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEE
T ss_pred CCCC--CEeECCCCCeEEECCCCCeE
Confidence 3464 48999999999999999964
No 95
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.26 E-value=0.0029 Score=32.27 Aligned_cols=30 Identities=40% Similarity=0.925 Sum_probs=24.2
Q ss_pred CCCCCCEEee----cCCceeEecCCCCccCCCCCc
Q psy9687 24 PCLNGGLCKD----LLNNYTCNCQQTGYTGPHCEI 54 (141)
Q Consensus 24 ~c~~~~~C~~----~~g~~~c~c~~~g~~g~~c~~ 54 (141)
+|.+++.|.. ....|.|.|.+ ||.|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~-Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAI-GFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECT-TEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCC-CCccCCCcc
Confidence 7999999983 33468899994 999999963
No 96
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.24 E-value=0.0017 Score=33.18 Aligned_cols=29 Identities=38% Similarity=0.934 Sum_probs=23.9
Q ss_pred CCCCCCEEee----CCCCeeecCCCCCCCCCCC
Q psy9687 63 PCKNGARCVD----KVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 63 ~c~~~~~c~~----~~~~~~c~C~~g~~~~~c~ 91 (141)
+|.+++.|.. ..+.|.|.|++||.|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce 47 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence 6888899973 3456889999999999885
No 97
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.07 E-value=0.0037 Score=46.23 Aligned_cols=37 Identities=32% Similarity=0.966 Sum_probs=32.8
Q ss_pred CCcCcCCCCCCCCEEee-CCCCeeecCC-CCCCCCCCCC
Q psy9687 56 IDDCAPNPCKNGARCVD-KVKDYLCECY-PGYTGKTCAD 92 (141)
Q Consensus 56 ~~~c~~~~c~~~~~c~~-~~~~~~c~C~-~g~~~~~c~~ 92 (141)
+++|...||.+++.|.+ ..++|.|.|. +||.|..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 36788899999999999 8889999999 9999998864
No 98
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.00 E-value=0.0015 Score=44.14 Aligned_cols=41 Identities=29% Similarity=0.730 Sum_probs=30.4
Q ss_pred CCCcCc--CCCCCCCCEEeeCCCCeeecCCCCCC--CCCCCCCCCC
Q psy9687 55 NIDDCA--PNPCKNGARCVDKVKDYLCECYPGYT--GKTCADDIKE 96 (141)
Q Consensus 55 ~~~~c~--~~~c~~~~~c~~~~~~~~c~C~~g~~--~~~c~~~~~~ 96 (141)
++++|. ..+|..++.|.++.++|.|.|.+||. |..|. +++.
T Consensus 4 DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~-d~d~ 48 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV-AEGS 48 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE-ETTC
T ss_pred cchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC-CCCC
Confidence 567886 45788889999999999999999997 55563 4444
No 99
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=95.89 E-value=0.0071 Score=32.14 Aligned_cols=33 Identities=21% Similarity=0.700 Sum_probs=25.0
Q ss_pred CCCcCcC--CCCCCCCEEeeCCCCeeec-CCCCCCC
Q psy9687 55 NIDDCAP--NPCKNGARCVDKVKDYLCE-CYPGYTG 87 (141)
Q Consensus 55 ~~~~c~~--~~c~~~~~c~~~~~~~~c~-C~~g~~~ 87 (141)
++++|.. .+|..++.|+++.++|+|. +..||.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 5677763 4587778999999999997 4557753
No 100
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=95.80 E-value=0.0037 Score=38.26 Aligned_cols=35 Identities=31% Similarity=1.040 Sum_probs=28.1
Q ss_pred CcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCC
Q psy9687 59 CAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADD 93 (141)
Q Consensus 59 c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~ 93 (141)
|...+|..++.|.+....|.|.|.+||.|..|+.+
T Consensus 122 ~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 122 CTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp CCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 34456777788988888999999999999988644
No 101
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=95.77 E-value=0.014 Score=41.37 Aligned_cols=43 Identities=30% Similarity=0.879 Sum_probs=34.4
Q ss_pred ccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCc
Q psy9687 12 LCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEI 54 (141)
Q Consensus 12 ~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~ 54 (141)
.|....+.|...||.+++.|......|.|.|...+|.|+.|+.
T Consensus 180 gC~~~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 180 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SCCCCSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CCCCCCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 4543456788899999999999888999999833899998863
No 102
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=95.73 E-value=0.0068 Score=45.11 Aligned_cols=35 Identities=34% Similarity=1.102 Sum_probs=30.6
Q ss_pred CcCcCCCCCCCCEEee-CCCCeeecCC-CCCCCCCCC
Q psy9687 57 DDCAPNPCKNGARCVD-KVKDYLCECY-PGYTGKTCA 91 (141)
Q Consensus 57 ~~c~~~~c~~~~~c~~-~~~~~~c~C~-~g~~~~~c~ 91 (141)
++|...||.+++.|.+ ..++|.|.|+ +||.|..|+
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce 38 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTC
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCC
Confidence 5688899999999985 4588999999 999999886
No 103
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=95.71 E-value=0.0083 Score=44.06 Aligned_cols=75 Identities=19% Similarity=0.384 Sum_probs=25.4
Q ss_pred CccCCCCCcCCCcCcCCCCCCCCEEeeC----CCCeeecCCCCCCCCCCCC----------CCCCCcCCCCCCCCEEeec
Q psy9687 46 GYTGPHCEINIDDCAPNPCKNGARCVDK----VKDYLCECYPGYTGKTCAD----------DIKECESNPCQYGGTCLEH 111 (141)
Q Consensus 46 g~~g~~c~~~~~~c~~~~c~~~~~c~~~----~~~~~c~C~~g~~~~~c~~----------~~~~c~~~~c~~~~~C~~~ 111 (141)
||.|..+. ....|..-+|...+.|.+. .....|.|+++|.|..|+. +++.|..-+|.+++.+...
T Consensus 426 Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~ 504 (525)
T 4aqs_A 426 GFYDLSAE-DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNS 504 (525)
T ss_dssp TEECCCTT-STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC-----------------------------
T ss_pred CCcCCCCC-CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCc
Confidence 55555443 3334544445444443321 1234699999999988852 3456766677777666443
Q ss_pred --CCCcceecCC
Q psy9687 112 --SNMSLYQRSD 121 (141)
Q Consensus 112 --~~~~~~~~~~ 121 (141)
.....|.|+.
T Consensus 505 C~~~tG~C~C~~ 516 (525)
T 4aqs_A 505 CSEDSGQCSCLP 516 (525)
T ss_dssp ------------
T ss_pred cCCCCCeeECCC
Confidence 1233566653
No 104
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.69 E-value=0.025 Score=33.31 Aligned_cols=37 Identities=30% Similarity=0.766 Sum_probs=28.5
Q ss_pred CCCCCCEEeeCC--CCe-eecCCCCCCCCCCCCCCC-CCcC
Q psy9687 63 PCKNGARCVDKV--KDY-LCECYPGYTGKTCADDIK-ECES 99 (141)
Q Consensus 63 ~c~~~~~c~~~~--~~~-~c~C~~g~~~~~c~~~~~-~c~~ 99 (141)
||.+++.|.+.. ..+ .|.|+++|.|..|+.+++ .|..
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~ 42 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYE 42 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCcc
Confidence 578888998763 455 899999999999976654 5543
No 105
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=95.46 E-value=0.013 Score=36.04 Aligned_cols=38 Identities=29% Similarity=0.767 Sum_probs=28.4
Q ss_pred CCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCCCcC
Q psy9687 61 PNPCKNGARCVDKVKDYLCECYPGYTGKTCADDIKECES 99 (141)
Q Consensus 61 ~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~c~~ 99 (141)
..+|..++.|.+..+.|.|.|.+||.|..|+ .+.+|..
T Consensus 124 ~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~-~~~~c~~ 161 (164)
T 3cfw_A 124 PWSCSGHGECVEIINNYTCNCDVGYYGPQCQ-FVQVDPR 161 (164)
T ss_dssp TTSSCSSEEEEEETTEEEEEECTTCBSSSSC-BC-----
T ss_pred CCcCCCCCeecccCCCceeeeCCCccccccc-ccccCcc
Confidence 4567888899998889999999999999995 6677753
No 106
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.43 E-value=0.0062 Score=30.11 Aligned_cols=28 Identities=25% Similarity=0.672 Sum_probs=19.3
Q ss_pred EEeeCCCCeeecCCCCCC----CCCCCCCCCCC
Q psy9687 69 RCVDKVKDYLCECYPGYT----GKTCADDIKEC 97 (141)
Q Consensus 69 ~c~~~~~~~~c~C~~g~~----~~~c~~~~~~c 97 (141)
.|+++.++|.|.|++||. +..| .+++++
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC-~dide~ 42 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSC-VSTERF 42 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCE-EECSSS
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCcc-ccCCcc
Confidence 577888888888888884 3344 355554
No 107
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.43 E-value=0.054 Score=30.79 Aligned_cols=59 Identities=17% Similarity=0.330 Sum_probs=29.1
Q ss_pred CCCCCCEEee-CCCCeeecCCCCCC--CCCCCCCCCC-CcC--CCCCCCCEEeecC-CCcceecCCC
Q psy9687 63 PCKNGARCVD-KVKDYLCECYPGYT--GKTCADDIKE-CES--NPCQYGGTCLEHS-NMSLYQRSDL 122 (141)
Q Consensus 63 ~c~~~~~c~~-~~~~~~c~C~~g~~--~~~c~~~~~~-c~~--~~c~~~~~C~~~~-~~~~~~~~~~ 122 (141)
.|..++.|.. ..+...|+|..+|. |..|..+ +. |.. +-|...+.|.... +..+|.|+..
T Consensus 17 ~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~ 82 (105)
T 1n1i_A 17 NVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKE 82 (105)
T ss_dssp CCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCST
T ss_pred CCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCC
Confidence 3455555555 34445566666664 3334333 33 432 2366666665553 4555555433
No 108
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=95.41 E-value=0.012 Score=36.16 Aligned_cols=27 Identities=22% Similarity=0.281 Sum_probs=17.2
Q ss_pred CcCCCCCCCCEEeecCCCcceecCCCC
Q psy9687 97 CESNPCQYGGTCLEHSNMSLYQRSDLP 123 (141)
Q Consensus 97 c~~~~c~~~~~C~~~~~~~~~~~~~~~ 123 (141)
|...+|..++.|++..+.+.|.|...+
T Consensus 122 ~~~~~C~~~g~C~~~~~~~~c~C~~g~ 148 (164)
T 3cfw_A 122 CQPWSCSGHGECVEIINNYTCNCDVGY 148 (164)
T ss_dssp CCTTSSCSSEEEEEETTEEEEEECTTC
T ss_pred CCCCcCCCCCeecccCCCceeeeCCCc
Confidence 334567777777777777777665443
No 109
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=95.38 E-value=0.0061 Score=43.53 Aligned_cols=41 Identities=37% Similarity=0.852 Sum_probs=0.0
Q ss_pred CCCCCCEEeeCCCCeeecCCCCCCCCCCCCCCCCCcCCCCCCCCEEeecCC
Q psy9687 63 PCKNGARCVDKVKDYLCECYPGYTGKTCADDIKECESNPCQYGGTCLEHSN 113 (141)
Q Consensus 63 ~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~~~~c~~~~c~~~~~C~~~~~ 113 (141)
+|.+++.|.+.. .|.|++||.|..|+ ...|.+++.|....|
T Consensus 372 ~C~ngg~C~~~~---~C~C~~G~~G~~Ce-------~c~C~~~g~C~~~~G 412 (426)
T 3zyj_B 372 HCQNGGTCHNNV---RCLCPAAYTGILCE-------KLRCEEAGSCGSDSG 412 (426)
T ss_dssp ---------------------------------------------------
T ss_pred cCCCCCCcCCCC---CCcCCCCCcCCCCc-------CCCCCCCCcccCCCC
Confidence 455666675544 68899999887663 224667777765443
No 110
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.35 E-value=0.035 Score=31.31 Aligned_cols=66 Identities=20% Similarity=0.579 Sum_probs=39.0
Q ss_pred CcCCCCCCCCEEeeC-CCCeeecCCCCCC--CCCCCCCC-CCCcCC--CCCCCCEEeecC-----CCcceecCCCCC
Q psy9687 59 CAPNPCKNGARCVDK-VKDYLCECYPGYT--GKTCADDI-KECESN--PCQYGGTCLEHS-----NMSLYQRSDLPA 124 (141)
Q Consensus 59 c~~~~c~~~~~c~~~-~~~~~c~C~~g~~--~~~c~~~~-~~c~~~--~c~~~~~C~~~~-----~~~~~~~~~~~~ 124 (141)
|....|..++.|... .+...|+|.+||. +..|..+. ..|... -|...+.|.... +...|.|+...+
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 333445666777553 4556788888875 33443322 456543 488888887664 456677765433
No 111
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.24 E-value=0.079 Score=30.13 Aligned_cols=65 Identities=22% Similarity=0.460 Sum_probs=47.7
Q ss_pred CCCCCCCCCCEEee-cCCceeEecCCCCcc--CCCCCcCCCc-Cc--CCCCCCCCEEeeCC-CCeeecCCCCCC
Q psy9687 20 CESGPCLNGGLCKD-LLNNYTCNCQQTGYT--GPHCEINIDD-CA--PNPCKNGARCVDKV-KDYLCECYPGYT 86 (141)
Q Consensus 20 c~~~~c~~~~~C~~-~~g~~~c~c~~~g~~--g~~c~~~~~~-c~--~~~c~~~~~c~~~~-~~~~c~C~~g~~ 86 (141)
|...-|..++.|+. ..|...|.|. .+|. |..|... +. |. ...|...+.|.... ....|.|.++|+
T Consensus 13 C~~t~Cp~NA~C~r~~~G~e~CrCl-~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 13 CIDTNVPENAACYRYLDGTEEWRCL-LGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEEC-TTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred ecCCCCCCCCCeEECCCCCEeEEEE-CCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 44445778889988 5788899999 5997 5567433 54 54 34488899998775 678899999874
No 112
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=94.96 E-value=0.0066 Score=37.10 Aligned_cols=27 Identities=22% Similarity=0.413 Sum_probs=19.2
Q ss_pred CCcCCCCCCCCEEeecCCCcceecCCC
Q psy9687 96 ECESNPCQYGGTCLEHSNMSLYQRSDL 122 (141)
Q Consensus 96 ~c~~~~c~~~~~C~~~~~~~~~~~~~~ 122 (141)
.|...+|.+.+.|.+..+.+.|.|...
T Consensus 121 ~~~~~pc~~~g~C~~~~~~~~c~C~~g 147 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETINNYTCKCDPG 147 (157)
T ss_dssp CCCTTGGGGSEEEEEETTEEEEEECTT
T ss_pred CCCCCCCCCCCEeecCCCCeeEECCCC
Confidence 344567888888888877777777543
No 113
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=94.86 E-value=0.011 Score=29.12 Aligned_cols=28 Identities=21% Similarity=0.771 Sum_probs=21.5
Q ss_pred EEeecCCceeEecCCCCcc----CCCCCcCCCcC
Q psy9687 30 LCKDLLNNYTCNCQQTGYT----GPHCEINIDDC 59 (141)
Q Consensus 30 ~C~~~~g~~~c~c~~~g~~----g~~c~~~~~~c 59 (141)
.|.++.++|.|.|.+ ||. ++.|. +++++
T Consensus 11 ~C~n~~gs~~C~C~~-Gy~L~~d~~tC~-dide~ 42 (51)
T 1kig_L 11 FCREERSEVRCSCAH-GYVLGDDSKSCV-STERF 42 (51)
T ss_dssp CCCEETTEECCCCCT-TEEECTTSSCEE-ECSSS
T ss_pred EeEcCCCCeEEeCCC-CcEECCCCCccc-cCCcc
Confidence 689999999999994 985 55674 55543
No 114
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.84 E-value=0.018 Score=35.75 Aligned_cols=39 Identities=28% Similarity=0.784 Sum_probs=22.3
Q ss_pred CCcccccccccCCCCCCC-----CCCCCEEeecCCceeEecCCCCcc
Q psy9687 7 QNGLRLCETNIDDCESGP-----CLNGGLCKDLLNNYTCNCQQTGYT 48 (141)
Q Consensus 7 ~~~g~~C~~~~~~c~~~~-----c~~~~~C~~~~g~~~c~c~~~g~~ 48 (141)
+|.+..+..++++|...+ |.+ .|.+..++|.|.|.+ ||.
T Consensus 114 Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~-Gy~ 157 (170)
T 1szb_A 114 GFEAFYAAEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRA-GYV 157 (170)
T ss_dssp EEEEEEEEEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCT-TEE
T ss_pred CceeeeeccccCcccCCCCCCCccCC--ccccCCCCEEEeCCC-CcE
Confidence 444444444566665433 443 577777777777763 665
No 115
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=94.71 E-value=0.055 Score=30.52 Aligned_cols=64 Identities=27% Similarity=0.606 Sum_probs=45.0
Q ss_pred CCCCCCCCEEee-cCCceeEecCCCCcc--CCCCCcCC-CcCcC--CCCCCCCEEeeCC-----CCeeecCCCCCC
Q psy9687 22 SGPCLNGGLCKD-LLNNYTCNCQQTGYT--GPHCEINI-DDCAP--NPCKNGARCVDKV-----KDYLCECYPGYT 86 (141)
Q Consensus 22 ~~~c~~~~~C~~-~~g~~~c~c~~~g~~--g~~c~~~~-~~c~~--~~c~~~~~c~~~~-----~~~~c~C~~g~~ 86 (141)
...|..++.|++ ..+...|.|. .+|. |..|.... ..|.. ..|..++.|.... +...|.|.+++.
T Consensus 9 ~~~C~~NA~C~r~~~g~e~C~C~-~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 9 KKQCPQNSGCFRHLDEREECKCL-LNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp SCCCCTTEEEECCTTSCCEEEEC-TTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred cCCCCCCCCeEEcCCCCEEEEec-CCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 344677788987 4678899999 4997 44564222 45653 3488889997664 567899999874
No 116
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=94.60 E-value=0.1 Score=31.68 Aligned_cols=32 Identities=47% Similarity=1.028 Sum_probs=25.1
Q ss_pred CCCCCCEEeecC--Cce-eEecCCCCccCCCCCcCC
Q psy9687 24 PCLNGGLCKDLL--NNY-TCNCQQTGYTGPHCEINI 56 (141)
Q Consensus 24 ~c~~~~~C~~~~--g~~-~c~c~~~g~~g~~c~~~~ 56 (141)
||.+++.|.... ..+ .|.|.+ +|.|..|+.+.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~-g~~G~~Cei~~ 48 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPK-KFGGQHCEIDK 48 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCT-TEESTTSCEES
T ss_pred CCCCCCCcCCCccccCCccccCCC-CCCCCceeccc
Confidence 799999997752 344 899995 99999997544
No 117
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=94.54 E-value=0.017 Score=28.78 Aligned_cols=29 Identities=31% Similarity=0.734 Sum_probs=19.1
Q ss_pred CEEeeCCC-CeeecCCCCCC----CCCCCCCCCCC
Q psy9687 68 ARCVDKVK-DYLCECYPGYT----GKTCADDIKEC 97 (141)
Q Consensus 68 ~~c~~~~~-~~~c~C~~g~~----~~~c~~~~~~c 97 (141)
..|+++.+ +|.|.|++||. +..| .++++|
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC-~d~dec 44 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSC-TPTVEY 44 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCE-EECSSS
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCcc-cCCccc
Confidence 36777777 58888888884 3344 355555
No 118
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=94.28 E-value=0.053 Score=43.93 Aligned_cols=45 Identities=29% Similarity=0.800 Sum_probs=35.4
Q ss_pred ccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcCC
Q psy9687 12 LCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEINI 56 (141)
Q Consensus 12 ~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~~ 56 (141)
.|....+.|...||.+++.|......|.|.|...+|.|+.|..+.
T Consensus 1012 gC~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1012 GCEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp SSSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCC
T ss_pred eeecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCC
Confidence 354445678889999999999888889999982389999996443
No 119
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=94.24 E-value=0.034 Score=27.58 Aligned_cols=28 Identities=29% Similarity=0.832 Sum_probs=21.9
Q ss_pred EEeecCC-ceeEecCCCCcc----CCCCCcCCCcC
Q psy9687 30 LCKDLLN-NYTCNCQQTGYT----GPHCEINIDDC 59 (141)
Q Consensus 30 ~C~~~~g-~~~c~c~~~g~~----g~~c~~~~~~c 59 (141)
.|.++.+ +|.|.|.+ ||. ++.|. ++++|
T Consensus 12 ~C~n~~ggs~~C~C~~-Gy~L~~Dg~tC~-d~dec 44 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHE-GYSLLADGVSCT-PTVEY 44 (53)
T ss_dssp EEEEETTTEEEEECCT-TEEECTTSSCEE-ECSSS
T ss_pred EeEcCCCCCEEeeCCC-CCEECCCCCccc-CCccc
Confidence 7999998 79999995 986 56774 66655
No 120
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=93.14 E-value=0.069 Score=28.85 Aligned_cols=29 Identities=38% Similarity=0.934 Sum_probs=13.9
Q ss_pred CCCCCCCEEee--cCCceeEecCCCCccCCCCC
Q psy9687 23 GPCLNGGLCKD--LLNNYTCNCQQTGYTGPHCE 53 (141)
Q Consensus 23 ~~c~~~~~C~~--~~g~~~c~c~~~g~~g~~c~ 53 (141)
..|.++ .|.. ..+.+.|.|. .+|+|..|+
T Consensus 46 ~yClnG-~C~~i~~~~~~~C~C~-~GYtG~RCE 76 (79)
T 1xdt_R 46 DFCIHG-ECKYVKELRAPSCICH-PGYHGERCH 76 (79)
T ss_dssp TCCSSE-EECCBGGGTBCCEEEC-TTEESTTCC
T ss_pred CcCCCC-EeeeecCCCCeEEEcC-CCccccccc
Confidence 345554 5532 1234556665 366665553
No 121
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=93.13 E-value=0.11 Score=36.75 Aligned_cols=38 Identities=24% Similarity=0.785 Sum_probs=32.2
Q ss_pred CCcCcCCCCCCCCEEeeCCCCeeecCCC-CCCCCCCCCC
Q psy9687 56 IDDCAPNPCKNGARCVDKVKDYLCECYP-GYTGKTCADD 93 (141)
Q Consensus 56 ~~~c~~~~c~~~~~c~~~~~~~~c~C~~-g~~~~~c~~~ 93 (141)
.+.|...||.+++.|......|.|.|+. +|.|+.|+.+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 4567788999999999988899999996 9999988643
No 122
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=93.01 E-value=0.07 Score=26.15 Aligned_cols=28 Identities=32% Similarity=0.738 Sum_probs=17.4
Q ss_pred CCCCCCEEe--eCCCCeeecCCCCCCCCCCC
Q psy9687 63 PCKNGARCV--DKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 63 ~c~~~~~c~--~~~~~~~c~C~~g~~~~~c~ 91 (141)
.|.+ +.|. ...+.+.|.|+.||+|.+|+
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred cccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 3444 4553 33445678888888887775
No 123
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=92.91 E-value=0.18 Score=31.12 Aligned_cols=29 Identities=34% Similarity=0.925 Sum_probs=21.3
Q ss_pred CCCCCCEEeecC--CceeE-ecCCCCccCCCCC
Q psy9687 24 PCLNGGLCKDLL--NNYTC-NCQQTGYTGPHCE 53 (141)
Q Consensus 24 ~c~~~~~C~~~~--g~~~c-~c~~~g~~g~~c~ 53 (141)
||.+++.|.... +.++| .|.. +|.|..|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~-g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPT-GTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCT-TEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCC-CCcCCCCc
Confidence 366777887654 56788 6884 88888885
No 124
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=92.63 E-value=0.14 Score=25.08 Aligned_cols=28 Identities=32% Similarity=0.768 Sum_probs=18.8
Q ss_pred CCCCCCEEee--CCCCeeecCCCCCCCCCCC
Q psy9687 63 PCKNGARCVD--KVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 63 ~c~~~~~c~~--~~~~~~c~C~~g~~~~~c~ 91 (141)
.|.++ .|.. ..+.+.|.|++||+|.+|+
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 35544 6653 3356778888888888885
No 125
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=92.16 E-value=0.16 Score=36.34 Aligned_cols=84 Identities=23% Similarity=0.438 Sum_probs=27.5
Q ss_pred CEEeecCCceeEecCCCCccCCCCCcCCCcCcCCCCCCCCEE-eeCCCCeeec-CCCCCCCCCCCCCCCCCcCCCCCCCC
Q psy9687 29 GLCKDLLNNYTCNCQQTGYTGPHCEINIDDCAPNPCKNGARC-VDKVKDYLCE-CYPGYTGKTCADDIKECESNPCQYGG 106 (141)
Q Consensus 29 ~~C~~~~g~~~c~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c-~~~~~~~~c~-C~~g~~~~~c~~~~~~c~~~~c~~~~ 106 (141)
..|....+.+.|.|. .++.|..|+.-.......++..+..+ +.......|. |.-.+.+..|..+ ..+|.+++
T Consensus 304 s~C~~~~g~~~C~C~-~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~-----t~~C~ngg 377 (426)
T 3zyj_B 304 TVCVYDNSKLTCECE-HNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNE-----LLHCQNGG 377 (426)
T ss_dssp SCEEEETTEEEECCC-TTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-----------------------
T ss_pred hhcCCCCCCceeeCC-CCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccC-----cccCCCCC
Confidence 468777777899999 49999999631111112233322211 1112223353 3334445556322 24789999
Q ss_pred EEeecCCCcceecCC
Q psy9687 107 TCLEHSNMSLYQRSD 121 (141)
Q Consensus 107 ~C~~~~~~~~~~~~~ 121 (141)
+|.... .|.|..
T Consensus 378 ~C~~~~---~C~C~~ 389 (426)
T 3zyj_B 378 TCHNNV---RCLCPA 389 (426)
T ss_dssp ---------------
T ss_pred CcCCCC---CCcCCC
Confidence 997644 565543
No 126
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=92.16 E-value=0.069 Score=28.87 Aligned_cols=30 Identities=33% Similarity=0.933 Sum_probs=21.8
Q ss_pred CCCCCCCCEEe--eCCCCeeecCCCCCCCCCCC
Q psy9687 61 PNPCKNGARCV--DKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 61 ~~~c~~~~~c~--~~~~~~~c~C~~g~~~~~c~ 91 (141)
...|.++ .|. ...+.+.|.|.+||.|.+|+
T Consensus 45 ~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 45 KDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp TTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred cCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 3456664 784 33456789999999999885
No 127
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=92.01 E-value=0.15 Score=41.37 Aligned_cols=44 Identities=25% Similarity=0.737 Sum_probs=35.2
Q ss_pred CCcCCCcCcCCCCCCCCEEeeCCCCeeecCC-CCCCCCCCCCCCC
Q psy9687 52 CEINIDDCAPNPCKNGARCVDKVKDYLCECY-PGYTGKTCADDIK 95 (141)
Q Consensus 52 c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~-~g~~~~~c~~~~~ 95 (141)
|....+.|...||.+++.|......|.|.|+ ++|.|+.|..+..
T Consensus 1013 C~~~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~~ 1057 (1245)
T 3qcw_A 1013 CEGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGT 1057 (1245)
T ss_dssp SSCCCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCCC
T ss_pred eecccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCCc
Confidence 4323457888899999999988888999999 5999999975543
No 128
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=91.46 E-value=0.18 Score=24.68 Aligned_cols=27 Identities=26% Similarity=0.883 Sum_probs=16.4
Q ss_pred CCCCCEEe--eCCCCeeecCCCCCCCCCCC
Q psy9687 64 CKNGARCV--DKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 64 c~~~~~c~--~~~~~~~c~C~~g~~~~~c~ 91 (141)
|.+ +.|. ...+.+.|.|+.+|.|.+|+
T Consensus 20 C~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 20 CIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp CSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 443 3664 33445667777777777764
No 129
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=91.30 E-value=0.21 Score=31.60 Aligned_cols=27 Identities=37% Similarity=0.999 Sum_probs=14.8
Q ss_pred CCCCCCCEEeeCCCCeeecCCCCCCCCCCC
Q psy9687 62 NPCKNGARCVDKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 62 ~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~ 91 (141)
.+|.+++.|+. ++. |.|++||.|..|+
T Consensus 153 ~~C~ngG~Cv~-P~~--C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 153 GGCRNGGFCNE-RRI--CECPDGFHGPHCE 179 (188)
T ss_dssp TCCCTTCEECT-TSC--EECCTTCBTTTTC
T ss_pred CCCCCCCEeCC-CCc--ccCcCCCCCCCCc
Confidence 34556666643 332 6666666666654
No 130
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=91.27 E-value=0.11 Score=32.01 Aligned_cols=21 Identities=29% Similarity=0.898 Sum_probs=13.8
Q ss_pred EEeeCCCCeeecCCCCCCCCCCC
Q psy9687 69 RCVDKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 69 ~c~~~~~~~~c~C~~g~~~~~c~ 91 (141)
.|....+ .|.|+++|.|..|+
T Consensus 125 ~Cd~~tG--~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 125 SCNPVTG--QCQCLPHVSGRDCG 145 (162)
T ss_dssp CCCTTTC--CCCBCTTEESTTCC
T ss_pred CCCCCCC--EeECCCCCcCCCCC
Confidence 4543333 48888888887773
No 131
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=90.82 E-value=0.068 Score=33.12 Aligned_cols=39 Identities=28% Similarity=0.858 Sum_probs=25.6
Q ss_pred CccCCCCCcCCCcCcCCC-----CCCCCEEeeCCCCeeecCCCCCC
Q psy9687 46 GYTGPHCEINIDDCAPNP-----CKNGARCVDKVKDYLCECYPGYT 86 (141)
Q Consensus 46 g~~g~~c~~~~~~c~~~~-----c~~~~~c~~~~~~~~c~C~~g~~ 86 (141)
||.+..+..++++|...+ |. ..|.++.++|.|.|++||.
T Consensus 114 Gf~~~~~~~di~eC~~~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 114 GFEAFYAAEDIDECQVAPGEAPTCD--HHCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp EEEEEEEEEECCTTCCCTTSCCSSS--SEEEEETTEEEEECCTTEE
T ss_pred CceeeeeccccCcccCCCCCCCccC--CccccCCCCEEEeCCCCcE
Confidence 444444334566776433 43 3788888889999999885
No 132
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=90.05 E-value=0.25 Score=29.95 Aligned_cols=37 Identities=30% Similarity=0.782 Sum_probs=27.8
Q ss_pred CCCCCCEEeeC--CCCe-eecCCCCCCCCCCCCCCC-CCcC
Q psy9687 63 PCKNGARCVDK--VKDY-LCECYPGYTGKTCADDIK-ECES 99 (141)
Q Consensus 63 ~c~~~~~c~~~--~~~~-~c~C~~g~~~~~c~~~~~-~c~~ 99 (141)
+|.+++.|+.. ...+ .|.|++||.|..|+.+++ .|..
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~~ 54 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYE 54 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEEC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCCC
Confidence 68899999765 2445 799999999999976654 4543
No 133
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=89.99 E-value=0.29 Score=30.99 Aligned_cols=18 Identities=33% Similarity=0.654 Sum_probs=9.2
Q ss_pred CCCCCEEeecCCCcceecCCC
Q psy9687 102 CQYGGTCLEHSNMSLYQRSDL 122 (141)
Q Consensus 102 c~~~~~C~~~~~~~~~~~~~~ 122 (141)
|.+++.|.. ...|.|...
T Consensus 155 C~ngG~Cv~---P~~C~C~~G 172 (188)
T 2ygo_A 155 CRNGGFCNE---RRICECPDG 172 (188)
T ss_dssp CCTTCEECT---TSCEECCTT
T ss_pred CCCCCEeCC---CCcccCcCC
Confidence 566666653 234555433
No 134
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=85.73 E-value=0.51 Score=23.82 Aligned_cols=19 Identities=26% Similarity=0.803 Sum_probs=16.4
Q ss_pred CEEeeCC-CCeeecCCCCCC
Q psy9687 68 ARCVDKV-KDYLCECYPGYT 86 (141)
Q Consensus 68 ~~c~~~~-~~~~c~C~~g~~ 86 (141)
..|+++. ++|.|.|++||.
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp SEEEECSTTCEEEECCTTEE
T ss_pred CEeEeCCCCCEEeeCCCCcE
Confidence 4788888 599999999995
No 135
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=85.68 E-value=0.64 Score=28.15 Aligned_cols=18 Identities=33% Similarity=0.914 Sum_probs=9.9
Q ss_pred EEeeCCCCeeecCCCCCC
Q psy9687 69 RCVDKVKDYLCECYPGYT 86 (141)
Q Consensus 69 ~c~~~~~~~~c~C~~g~~ 86 (141)
.|.+..+.+.|.|.+||.
T Consensus 131 ~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 131 FCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp EEEEETTEEEEECCTTCE
T ss_pred cccCcCCCEEEecCCCcE
Confidence 455555555555555553
No 136
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=81.63 E-value=0.77 Score=30.74 Aligned_cols=29 Identities=34% Similarity=0.933 Sum_probs=21.3
Q ss_pred cCCCCCC---CCCCCCEEeecCCceeEecCCCCcc
Q psy9687 17 IDDCESG---PCLNGGLCKDLLNNYTCNCQQTGYT 48 (141)
Q Consensus 17 ~~~c~~~---~c~~~~~C~~~~g~~~c~c~~~g~~ 48 (141)
.|+|... .|.+ .|.++.++|+|.|.. ||.
T Consensus 2 ~~eC~~~~~~~C~~--~C~~~~~~~~C~C~~-G~~ 33 (283)
T 3f1s_B 2 KNECHPERTDGCQH--FCLPGQESYTCSCAQ-GYR 33 (283)
T ss_dssp -CCCCSSCSSSCSS--BCCCCTTSCCCBCCT-TEE
T ss_pred CCccCCCCCCCCCC--EeeCCCCCeEecCCC-Ccc
Confidence 4677644 3544 799999999999984 885
No 137
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=79.77 E-value=0.92 Score=31.27 Aligned_cols=32 Identities=28% Similarity=0.880 Sum_probs=17.6
Q ss_pred CCCC-CCCCCCCCEEeecCCceeEecCCCCcc----CCCC
Q psy9687 18 DDCE-SGPCLNGGLCKDLLNNYTCNCQQTGYT----GPHC 52 (141)
Q Consensus 18 ~~c~-~~~c~~~~~C~~~~g~~~c~c~~~g~~----g~~c 52 (141)
++|. +..|.+ .|.++.++|.|.|.+ ||. ++.|
T Consensus 2 ~ec~~~~~C~~--~C~n~~g~~~C~C~~-g~~l~~d~~~C 38 (349)
T 3v64_C 2 NECAEEGYCSQ--GCTNSEGAFQCWCEA-GYELRPDRRSC 38 (349)
T ss_dssp -------CCSS--EECCC---CCEECCT-TEEECTTSSCE
T ss_pred cccCCCCCCcC--eeecCCCCeEEECCC-CccCCCCCCcc
Confidence 4565 223654 899999999999995 885 4556
No 138
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=78.20 E-value=0.89 Score=31.35 Aligned_cols=20 Identities=25% Similarity=0.730 Sum_probs=14.6
Q ss_pred CCEEeeCCCCeeecCCCCCC
Q psy9687 67 GARCVDKVKDYLCECYPGYT 86 (141)
Q Consensus 67 ~~~c~~~~~~~~c~C~~g~~ 86 (141)
...|.++.++|.|.|++||.
T Consensus 11 ~~~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 11 SQGCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp SSEECCC---CCEECCTTEE
T ss_pred cCeeecCCCCeEEECCCCcc
Confidence 34899999999999999995
No 139
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=72.36 E-value=7.8 Score=21.48 Aligned_cols=64 Identities=14% Similarity=0.312 Sum_probs=38.8
Q ss_pred CcCCCCCCCCEEeeCC-CCeeecCCCCCC--CCCCCCC-CCCCcC--CCCCCCCEEeecC-CCcceecCCC
Q psy9687 59 CAPNPCKNGARCVDKV-KDYLCECYPGYT--GKTCADD-IKECES--NPCQYGGTCLEHS-NMSLYQRSDL 122 (141)
Q Consensus 59 c~~~~c~~~~~c~~~~-~~~~c~C~~g~~--~~~c~~~-~~~c~~--~~c~~~~~C~~~~-~~~~~~~~~~ 122 (141)
|....|..++.|.... +.-.|+|..+|. +..|..+ ...|.. +.|...+.|.... .-.+|.|+..
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~ 77 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKE 77 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCST
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCCCcEEEECCCC
Confidence 3344566677777654 456678888874 4444333 224544 2488888887776 4667777643
No 140
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=71.91 E-value=2.2 Score=28.53 Aligned_cols=30 Identities=27% Similarity=0.737 Sum_probs=21.0
Q ss_pred CcCcCC-CCCCCCEEeeCCCCeeecCCCCCC
Q psy9687 57 DDCAPN-PCKNGARCVDKVKDYLCECYPGYT 86 (141)
Q Consensus 57 ~~c~~~-~c~~~~~c~~~~~~~~c~C~~g~~ 86 (141)
++|... .-.....|.++.+.|.|.|..||.
T Consensus 3 ~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~ 33 (283)
T 3f1s_B 3 NECHPERTDGCQHFCLPGQESYTCSCAQGYR 33 (283)
T ss_dssp CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEE
T ss_pred CccCCCCCCCCCCEeeCCCCCeEecCCCCcc
Confidence 455433 223345788889999999999984
No 141
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=62.38 E-value=2.4 Score=32.56 Aligned_cols=44 Identities=20% Similarity=0.455 Sum_probs=34.2
Q ss_pred eeccCCcccccccccCCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCC
Q psy9687 3 VLWSQNGLRLCETNIDDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCE 53 (141)
Q Consensus 3 ~~~~~~~g~~C~~~~~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~ 53 (141)
+|.++|.|..|..+ ..|.. .|..++.|.+. .|.|.+ ||.|..|.
T Consensus 521 ~C~~gw~g~dc~i~-~~Cp~-~C~ghG~C~~G----~C~Cd~-G~~G~~C~ 564 (725)
T 2e26_A 521 DKQQTWAIDNVYIG-DGCLD-MCSGHGRCVQG----SCVCDE-QWGGLYCD 564 (725)
T ss_dssp CTTCCEEEEEEEEE-SCSSG-GGGGSEEEETT----EEEECT-TEESTTSC
T ss_pred ccCCCccccccccc-CCCCc-ccCCCcEECCC----CEeeCC-CccCCCcC
Confidence 47788999999622 34654 58888999875 899995 99999885
No 142
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=55.50 E-value=40 Score=26.76 Aligned_cols=37 Identities=35% Similarity=0.692 Sum_probs=28.3
Q ss_pred CCCCCCCCCCCCEEeecCCceeEecCCCCccCCCCCcC
Q psy9687 18 DDCESGPCLNGGLCKDLLNNYTCNCQQTGYTGPHCEIN 55 (141)
Q Consensus 18 ~~c~~~~c~~~~~C~~~~g~~~c~c~~~g~~g~~c~~~ 55 (141)
+.|.-.||.+++.+........|.|.+ +|.|..|+..
T Consensus 498 ~~c~C~PC~ngg~~~l~g~~C~C~C~~-g~~G~~Ce~~ 534 (913)
T 3t5o_A 498 DPCQCAPCPNNGRPTLSGTECLCVCQS-GTYGENCEKQ 534 (913)
T ss_dssp CGGGSCCBTTTBEEEEETTEEEEECCT-TBCSTTSCCB
T ss_pred ccccCCCCCCCCEeecCCCceEEEccC-CccccCccCc
Confidence 445445899999988766677899995 9999998643
No 143
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=54.83 E-value=17 Score=24.57 Aligned_cols=20 Identities=25% Similarity=0.527 Sum_probs=15.2
Q ss_pred CCEEeeCCC--CeeecCCCCCC
Q psy9687 67 GARCVDKVK--DYLCECYPGYT 86 (141)
Q Consensus 67 ~~~c~~~~~--~~~c~C~~g~~ 86 (141)
...|+...+ .|+|.|+.||.
T Consensus 278 s~~C~~~~~~~~~~C~C~~g~~ 299 (318)
T 3sov_A 278 SHLCLMSPVKPFYQCACPTGVK 299 (318)
T ss_dssp SSEEEECSSTTSEEEECSTTCC
T ss_pred ceEEecCCCCCCeEEECCCCCE
Confidence 347877655 68999999985
No 144
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=52.89 E-value=22 Score=28.14 Aligned_cols=35 Identities=31% Similarity=0.720 Sum_probs=27.2
Q ss_pred CcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCCCC
Q psy9687 59 CAPNPCKNGARCVDKVKDYLCECYPGYTGKTCADD 93 (141)
Q Consensus 59 c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~~~ 93 (141)
|.-.||.+++.+........|.|+++|.|..|+..
T Consensus 500 c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~ 534 (913)
T 3t5o_A 500 CQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQ 534 (913)
T ss_dssp GGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCB
T ss_pred ccCCCCCCCCEeecCCCceEEEccCCccccCccCc
Confidence 43347999998877666778999999999888643
No 145
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=52.87 E-value=16 Score=24.59 Aligned_cols=7 Identities=43% Similarity=1.469 Sum_probs=3.6
Q ss_pred ceeEecC
Q psy9687 37 NYTCNCQ 43 (141)
Q Consensus 37 ~~~c~c~ 43 (141)
+|+|.|+
T Consensus 296 ~~~C~C~ 302 (316)
T 1ijq_A 296 KFTCACP 302 (316)
T ss_dssp SEEEECC
T ss_pred CeEeeCC
Confidence 4555555
No 146
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=45.85 E-value=14 Score=27.73 Aligned_cols=34 Identities=26% Similarity=0.829 Sum_probs=24.0
Q ss_pred ccCCCCCC--CCCCCCEEeecC-CceeEecCCCCcc----CCCC
Q psy9687 16 NIDDCESG--PCLNGGLCKDLL-NNYTCNCQQTGYT----GPHC 52 (141)
Q Consensus 16 ~~~~c~~~--~c~~~~~C~~~~-g~~~c~c~~~g~~----g~~c 52 (141)
+.++|... .|. ..|.+.+ ++|.|.|.. ||. ++.|
T Consensus 264 ~~n~C~~~ng~C~--~~C~~~~~~~~~C~C~~-g~~l~~d~~~C 304 (628)
T 4a0p_A 264 GWNECASSNGHCS--HLCLAVPVGGFVCGCPA-HYSLNADNRTC 304 (628)
T ss_dssp CCCTTTTTGGGCS--SEEEEETTTEEEEECST-TCEECTTSSCE
T ss_pred cceEeccCCCCcc--hhhhcCCCCCeeEEcCC-CcEecccCCcC
Confidence 45677643 254 3899988 899999994 885 4556
No 147
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=43.97 E-value=3 Score=32.00 Aligned_cols=44 Identities=27% Similarity=0.572 Sum_probs=30.7
Q ss_pred ecCCCCccCCCCCcCCCcCcCCCCCCCCEEeeCCCCeeecCCCCCCCCCCC
Q psy9687 41 NCQQTGYTGPHCEINIDDCAPNPCKNGARCVDKVKDYLCECYPGYTGKTCA 91 (141)
Q Consensus 41 ~c~~~g~~g~~c~~~~~~c~~~~c~~~~~c~~~~~~~~c~C~~g~~~~~c~ 91 (141)
.|. .++.|..|.. ...|. ..|..++.|+.. .|+|.+||.|..|.
T Consensus 521 ~C~-~gw~g~dc~i-~~~Cp-~~C~ghG~C~~G----~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 521 DKQ-QTWAIDNVYI-GDGCL-DMCSGHGRCVQG----SCVCDEQWGGLYCD 564 (725)
T ss_dssp CTT-CCEEEEEEEE-ESCSS-GGGGGSEEEETT----EEEECTTEESTTSC
T ss_pred ccC-CCcccccccc-cCCCC-cccCCCcEECCC----CEeeCCCccCCCcC
Confidence 455 3777776631 13443 468899999764 39999999998875
No 148
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=43.94 E-value=14 Score=27.86 Aligned_cols=32 Identities=19% Similarity=0.570 Sum_probs=21.7
Q ss_pred CCCcCcCCCCCCCCEEeeCC-CCeeecCCCCCC
Q psy9687 55 NIDDCAPNPCKNGARCVDKV-KDYLCECYPGYT 86 (141)
Q Consensus 55 ~~~~c~~~~c~~~~~c~~~~-~~~~c~C~~g~~ 86 (141)
..++|....-.....|++.. ++|.|.|+.||.
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~ 296 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYS 296 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCE
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcE
Confidence 34555432222345888888 889999999985
No 149
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=39.92 E-value=23 Score=23.86 Aligned_cols=12 Identities=17% Similarity=-0.100 Sum_probs=9.7
Q ss_pred eeccCCcccccc
Q psy9687 3 VLWSQNGLRLCE 14 (141)
Q Consensus 3 ~~~~~~~g~~C~ 14 (141)
.|.++|.|..|+
T Consensus 210 ~C~~g~~G~~Ce 221 (280)
T 2p26_A 210 RCDTGYIGKNCE 221 (280)
T ss_dssp EECTTEESTTSC
T ss_pred eCCCCCcCCcce
Confidence 477899999885
No 150
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=37.02 E-value=18 Score=27.13 Aligned_cols=18 Identities=22% Similarity=0.682 Sum_probs=11.6
Q ss_pred CEEeeCCCCeeecCCCCC
Q psy9687 68 ARCVDKVKDYLCECYPGY 85 (141)
Q Consensus 68 ~~c~~~~~~~~c~C~~g~ 85 (141)
..|++..+.+.|.|+.||
T Consensus 590 ~~C~~~~~~~~C~C~~g~ 607 (619)
T 3s94_A 590 HLCLYRPQGLRCACPIGF 607 (619)
T ss_dssp SEEEEETTEEEEECCTTC
T ss_pred HhhccCCCCeEEECCCCC
Confidence 356666666667777666
No 151
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=32.84 E-value=8.8 Score=27.07 Aligned_cols=17 Identities=35% Similarity=0.956 Sum_probs=11.7
Q ss_pred CceeEecCCCCccCCCCC
Q psy9687 36 NNYTCNCQQTGYTGPHCE 53 (141)
Q Consensus 36 g~~~c~c~~~g~~g~~c~ 53 (141)
+.+.|.|.. ++.|..|+
T Consensus 270 ~~~~C~C~~-nt~G~~Ce 286 (375)
T 4aqt_A 270 DKLMCNCKH-NTYGVDCE 286 (375)
T ss_dssp SCEEECCCT-TEESTTSC
T ss_pred CCeeeeCcC-CCcCCCcc
Confidence 445678874 77777775
No 152
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=31.81 E-value=22 Score=26.65 Aligned_cols=20 Identities=10% Similarity=-0.165 Sum_probs=13.9
Q ss_pred CCEEeecCCCcceecCCCCC
Q psy9687 105 GGTCLEHSNMSLYQRSDLPA 124 (141)
Q Consensus 105 ~~~C~~~~~~~~~~~~~~~~ 124 (141)
...|....+.+.|.|...+.
T Consensus 589 ~~~C~~~~~~~~C~C~~g~~ 608 (619)
T 3s94_A 589 SHLCLYRPQGLRCACPIGFE 608 (619)
T ss_dssp SSEEEEETTEEEEECCTTCE
T ss_pred hHhhccCCCCeEEECCCCCE
Confidence 45788888888887765443
No 153
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=31.25 E-value=34 Score=25.50 Aligned_cols=26 Identities=23% Similarity=0.588 Sum_probs=17.0
Q ss_pred CCCCCCCEEeecC-CceeEecCCCCccC
Q psy9687 23 GPCLNGGLCKDLL-NNYTCNCQQTGYTG 49 (141)
Q Consensus 23 ~~c~~~~~C~~~~-g~~~c~c~~~g~~g 49 (141)
++|..++.|+... +.|.|.|. .||.|
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~-~G~ag 53 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCA-VGWAG 53 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEEC-TTEES
T ss_pred CCCCCCCeeEeCCCCCEecCCC-CCCCC
Confidence 4677777776653 45677777 47764
No 154
>1q2j_A MU-conotoxin SMIIIA; HET: PCA; NMR {Synthetic} SCOP: j.30.1.1 PDB: 2yen_A*
Probab=23.17 E-value=50 Score=13.28 Aligned_cols=15 Identities=27% Similarity=0.649 Sum_probs=8.5
Q ss_pred CCCCcCCCCCCCCEE
Q psy9687 94 IKECESNPCQYGGTC 108 (141)
Q Consensus 94 ~~~c~~~~c~~~~~C 108 (141)
.+.|+..+|..++.|
T Consensus 7 pngCs~rWCrdharC 21 (26)
T 1q2j_A 7 RRGCSSRWCRDHSRC 21 (26)
T ss_dssp SSCCCSSSSSSSSSC
T ss_pred CCcccchhhccccee
Confidence 345555566666555
Done!