BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9688
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P10040|CRB_DROME Protein crumbs OS=Drosophila melanogaster GN=crb PE=1 SV=3
Length = 2146
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 90/178 (50%), Gaps = 28/178 (15%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNG-------------NSKVDHCLTDPCLGHGTCIN 58
C +D++EC +C GIC N G+ +S VD CL+ PCL TC N
Sbjct: 643 CGNDVDECTLHPKICGNGICKNEKGSYKCYCTPGFTGVHCDSDVDECLSFPCLNGATCHN 702
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+ + Y+C+C P Y G NCE D +C SNPC N C+D + GR ++ +
Sbjct: 703 KINAYECVCQPGYEGENCEVDIDECGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDI-D 761
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCT-EDFTGEYCQFENSAACVTLNPCQNNATCV 165
I DC +PCLN C+D F C+C+ + GE C+ N C++ NPC N A C+
Sbjct: 762 IDDCVGDPCLNGGQCIDQLG-GFRCDCSGTGYEGENCEL-NIDECLS-NPCTNGAKCL 816
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 78/138 (56%), Gaps = 17/138 (12%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD-CSSNPCLNDGVCV------ 95
+ CL DPC+GHGTC + + Y+C CT RYSG NC+KDNG C+ NPC N G C+
Sbjct: 267 NFCLNDPCMGHGTCSSSPEGYECRCTARYSGKNCQKDNGSPCAKNPCENGGSCLENSRGD 326
Query: 96 -----DEVYKGRY--WELPEIRDCTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFE 147
D + G++ E+ C +NPCLN+ C V G+ + C C + + G C+ +
Sbjct: 327 YQCFCDPNHSGQHCETEVNIHPLCQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVD 386
Query: 148 NSAACVTLNPCQNNATCV 165
+ C + PCQNN +C+
Sbjct: 387 -TDECAS-QPCQNNGSCI 402
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD--- 96
+ +D CL CL +GTCIN+ + C C P + G +CE++ +C+ PC N G C D
Sbjct: 1793 TDIDECLNTECLNNGTCINQVAAFFCQCQPGFEGQHCEQNIDECADQPCHNGGNCTDLIA 1852
Query: 97 -------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLS----FYCNCTEDFTGEYCQ 145
E Y G ++ + C + PC N C + N S F C C F G C
Sbjct: 1853 SYVCDCPEDYMGPQCDVLKQMTCENEPCRNGSTCQNGFNASTGNNFTCTCVPGFEGPLCD 1912
Query: 146 FENSAACVTLNPCQNNATCVAS 167
+ PC N C+ +
Sbjct: 1913 I----PFCEITPCDNGGLCLTT 1930
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 45 CLTDPCLGHGTC--INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
C T+PCL +G C I S C C Y+G CE D +C+S PC N+G C+D +
Sbjct: 350 CQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTDECASQPCQNNGSCIDRINGFS 409
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
Y G + + + +C NPCLN C D + C C + + GE C +
Sbjct: 410 CDCSGTGYTGAFCQT-NVDECDKNPCLNGGRCFDTYGW-YTCQCLDGWGGEIC--DRPMT 465
Query: 152 CVTLNPCQNNATCVASPGEKQITCLCLKE 180
C T C N TC+ P Q CLC E
Sbjct: 466 CQTQQ-CLNGGTCLDKPIGFQ--CLCPPE 491
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 13/130 (10%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV------ 98
C C G C + SD Y C C P + G++C D +C + CLN+G C+++V
Sbjct: 1760 CFQSDCKNDGFCQSPSDEYACTCQPGFEGDDCGTDIDECLNTECLNNGTCINQVAAFFCQ 1819
Query: 99 ----YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154
++G++ E I +C PC N C D S+ C+C ED+ G C C
Sbjct: 1820 CQPGFEGQHCEQ-NIDECADQPCHNGGNCTDL-IASYVCDCPEDYMGPQCDVLKQMTCEN 1877
Query: 155 LNPCQNNATC 164
PC+N +TC
Sbjct: 1878 -EPCRNGSTC 1886
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 86/205 (41%), Gaps = 54/205 (26%)
Query: 5 PISLSTLCESDINECETVKDVC-NYGICVNTNG--------------NGNSKVDHCLTDP 49
P +C+ DI++C V D C N G C++ G N +D CL++P
Sbjct: 751 PGMTGRICDIDIDDC--VGDPCLNGGQCIDQLGGFRCDCSGTGYEGENCELNIDECLSNP 808
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE----VYK-GRYW 104
C C++R Y C C Y G NCE+D +C SNPC +G C++ +Y+ R
Sbjct: 809 CTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINECESNPCQYNGNCLERSNITLYQMSRIT 868
Query: 105 ELPE------------------------------IRDCTSNPCLNDCVCVDDGNLSFYCN 134
+LP+ I +C SNPC C +DG ++ C
Sbjct: 869 DLPKVFSQPFSFENASGYECVCVPGIIGKNCEININECDSNPCSKHGNC-NDGIGTYTCE 927
Query: 135 CTEDFTGEYCQFENSAACVTLNPCQ 159
C F G +C+ N C NPCQ
Sbjct: 928 CEPGFEGTHCEI-NIDECDRYNPCQ 951
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPR-YSGNNCEKDNGDCSSNPCLNDGVCVD---- 96
D C + PC +G+CI+R + + C C+ Y+G C+ + +C NPCLN G C D
Sbjct: 387 TDECASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDECDKNPCLNGGRCFDTYGW 446
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ + G + P C + CLN C+D + F C C ++TGE CQ S
Sbjct: 447 YTCQCLDGWGGEICDRP--MTCQTQQCLNGGTCLDK-PIGFQCLCPPEYTGELCQIAPSC 503
Query: 151 A--CVTLNPCQNNATCVASPGEKQITC 175
A C + C CV PG C
Sbjct: 504 AQQCPIDSECV-GGKCVCKPGSSGYNC 529
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 60/146 (41%), Gaps = 23/146 (15%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
+ C PC G C+ C C+ Y+G CE+D +C SNPC N G C D V G
Sbjct: 1913 IPFCEITPCDNGGLCLTTGAVPMCKCSLGYTGRLCEQDINECESNPCQNGGQCKDLV--G 1970
Query: 102 RYWELPEIRDCTSNPCLNDCVCVDDGNL----------------SFYCNCTEDFTGEYCQ 145
RY + C ND +D+ N+ SF C C + + G YC
Sbjct: 1971 RYECDCQGTGFEGIRCEND---IDECNMEGDYCGGLGRCFNKPGSFQCICQKPYCGAYCN 2027
Query: 146 FENSAACVTLNPCQNNATCVASPGEK 171
F + C + C N CV S G K
Sbjct: 2028 FTD--PCNATDLCSNGGRCVESCGAK 2051
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 17/128 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSS-NPCLNDGVCVDEV-- 98
++ C ++PC HG C + Y C C P + G +CE + +C NPC G C D++
Sbjct: 903 INECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPC-QRGTCYDQIDD 961
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVC----VDDGNLSFYCNCTEDFTGEYCQF 146
Y G+ + ++ C NPCLN C +++ + C C F G+ C+
Sbjct: 962 YDCDCDANYGGKNCSV-LLKGCDQNPCLNGGACLPYLINEVTHLYNCTCENGFQGDKCEK 1020
Query: 147 ENSAACVT 154
+ + V
Sbjct: 1021 TTTLSMVA 1028
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 14/104 (13%)
Query: 5 PISLSTLCESDINECET----VKDVCNYGICVNT--------NGNGNSKVDHC-LTDPCL 51
P + CE +INEC++ CN GI T + +D C +PC
Sbjct: 892 PGIIGKNCEININECDSNPCSKHGNCNDGIGTYTCECEPGFEGTHCEINIDECDRYNPCQ 951
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV 95
GTC ++ D Y C C Y G NC C NPCLN G C+
Sbjct: 952 -RGTCYDQIDDYDCDCDANYGGKNCSVLLKGCDQNPCLNGGACL 994
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 80/198 (40%), Gaps = 43/198 (21%)
Query: 9 STLCESDINECETVKDVC-NYGICVNT---------NGNGNSKVDH---CLTDPCLGHGT 55
C+++++EC+ K+ C N G C +T +G G D C T CL GT
Sbjct: 419 GAFCQTNVDECD--KNPCLNGGRCFDTYGWYTCQCLDGWGGEICDRPMTCQTQQCLNGGT 476
Query: 56 CINRSDRYQCLCTPRYSGNNCEKD--------------NGDCSSNPCLNDGVCVDEVYKG 101
C+++ +QCLC P Y+G C+ G C P + C G
Sbjct: 477 CLDKPIGFQCLCPPEYTGELCQIAPSCAQQCPIDSECVGGKCVCKPGSSGYNCQTSTGDG 536
Query: 102 -RYWELPEIR-DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQ 159
L I + T+ CLN C +G +C C ++G+ C E + C LN CQ
Sbjct: 537 ASALALTPINCNATNGKCLNGGTCSMNGT---HCYCAVGYSGDRC--EKAENCSPLN-CQ 590
Query: 160 NNATCVASPGEKQITCLC 177
CV Q CLC
Sbjct: 591 EPMVCV------QNQCLC 602
Score = 36.6 bits (83), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 42/98 (42%), Gaps = 11/98 (11%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEI 109
CL GTC + C C YSG+ CEK +CS C VCV PE
Sbjct: 554 CLNGGTC--SMNGTHCYCAVGYSGDRCEKAE-NCSPLNCQEPMVCVQ-----NQCLCPEN 605
Query: 110 R---DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
+ C + PC N CVD N + C CT +TG C
Sbjct: 606 KVCNQCATQPCQNGGECVDLPNGDYECKCTRGWTGRTC 643
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 58/150 (38%), Gaps = 44/150 (29%)
Query: 11 LCESDINECET--------VKDVCNYGICVNTNGNG------NSKVDHC--LTDPCLGHG 54
LCE DINECE+ KD+ C + G G + +D C D C G G
Sbjct: 1946 LCEQDINECESNPCQNGGQCKDLVGRYEC-DCQGTGFEGIRCENDIDECNMEGDYCGGLG 2004
Query: 55 TCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTS 114
C N+ +QC+C Y G C + +++ C N G CV+ C +
Sbjct: 2005 RCFNKPGSFQCICQKPYCGAYCNFTDPCNATDLCSNGGRCVES--------------CGA 2050
Query: 115 NPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
P +YC C E F G+ C
Sbjct: 2051 KP-------------DYYCECPEGFAGKNC 2067
>sp|A2AVA0|SVEP1_MOUSE Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Mus musculus GN=Svep1 PE=1
SV=1
Length = 3567
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 87/177 (49%), Gaps = 28/177 (15%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
CE+DI+EC ++ N GIC + G ++ C++ PCL GTC +
Sbjct: 1227 CETDIDECSSLP-CLNGGICRDQVGGFTCECSLGYSGQICEENINECISSPCLNKGTCTD 1285
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
Y+C C Y G +CE D +C S+PCLN+ VC D+V + G E
Sbjct: 1286 GLASYRCTCVKGYMGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCPPGFLGTRCEK-N 1344
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ +C S PC N C D N SF C C FTG +C+ N C + NPC+N ATCV
Sbjct: 1345 VDECLSQPCQNGATCKDGAN-SFRCQCPAGFTGTHCEL-NINECQS-NPCRNQATCV 1398
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 70/137 (51%), Gaps = 15/137 (10%)
Query: 39 NSKVDH-CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE 97
+S+V H C +PC GTC Y CLC P Y+G CE D +CSS PCLN G+C D+
Sbjct: 1189 SSQVFHECFLNPCHNSGTCQQLGRGYVCLCPPGYTGLKCETDIDECSSLPCLNGGICRDQ 1248
Query: 98 V----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
V Y G+ E I +C S+PCLN C DG S+ C C + + G +C E
Sbjct: 1249 VGGFTCECSLGYSGQICE-ENINECISSPCLNKGTCT-DGLASYRCTCVKGYMGVHC--E 1304
Query: 148 NSAACVTLNPCQNNATC 164
+PC NNA C
Sbjct: 1305 TDVNECQSSPCLNNAVC 1321
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 8 LSTLCESDINECETVKDVCNYGICVNTNGNGNSK-------------VDHCLTDPCLGHG 54
+ CE+D+NEC++ N +C + G + K VD CL+ PC
Sbjct: 1299 MGVHCETDVNECQS-SPCLNNAVCKDQVGGFSCKCPPGFLGTRCEKNVDECLSQPCQNGA 1357
Query: 55 TCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
TC + ++ ++C C ++G +CE + +C SNPC N CVDE+
Sbjct: 1358 TCKDGANSFRCQCPAGFTGTHCELNINECQSNPCRNQATCVDEL 1401
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 5 PISLSTLCESDINEC--------ETVKDVCNYGICVNTNGNGNSK----VDHCLTDPCLG 52
P L T CE +++EC T KD N C G + ++ C ++PC
Sbjct: 1334 PGFLGTRCEKNVDECLSQPCQNGATCKDGANSFRCQCPAGFTGTHCELNINECQSNPCRN 1393
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDN 80
TC++ + Y C C P +SG+ CE +
Sbjct: 1394 QATCVDELNSYSCKCQPGFSGHRCETEQ 1421
>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2
PE=1 SV=3
Length = 2471
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
S+V+ CL++PC+ HG C Y+CLC + G NCE D +C SNPC N G C + V
Sbjct: 719 SQVNECLSNPCI-HGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCDNLVN 777
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
+KG ++ I +C SNPCLN C DD + + C+C +TG+ CQ
Sbjct: 778 GYRCTCKKGFKGYNCQV-NIDECASNPCLNQGTCFDDIS-GYTCHCVLPYTGKNCQ--TV 833
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
A + NPC+N A C SP + TCLC
Sbjct: 834 LAPCSPNPCENAAVCKESPNFESYTCLC 861
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 42 VDHCL---TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
VD C ++PC G C+N + C C Y+G CE D +C S+PC ND C+D++
Sbjct: 416 VDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKI 475
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+KG + EL EI +C SNPC+N+ CVD N F C C FTG CQ +
Sbjct: 476 GGFTCLCMPGFKGVHCEL-EINECQSNPCVNNGQCVDKVN-RFQCLCPPGFTGPVCQIDI 533
Query: 149 SAACVTLNPCQNNATCVASP 168
T PC N A C+ P
Sbjct: 534 DDCSST--PCLNGAKCIDHP 551
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 72/145 (49%), Gaps = 14/145 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
+D C++ PC+ HG C N Y C C P +SG +CE+D DC +NPC N G C+D V
Sbjct: 874 IDECISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLANPCQNGGSCMDGVNTF 933
Query: 102 RYWELP---------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
LP ++ +C S PC N C D N S+ C C F G +C EN+
Sbjct: 934 SCLCLPGFTGDKCQTDMNECLSEPCKNGGTCSDYVN-SYTCKCQAGFDGVHC--ENNINE 990
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
T + C N TCV G +CLC
Sbjct: 991 CTESSCFNGGTCVD--GINSFSCLC 1013
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 16/149 (10%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
+ ++ CL++PC GTC + + Y C C + G +CE + +C+ + C N G CVD +
Sbjct: 947 QTDMNECLSEPCKNGGTCSDYVNSYTCKCQAGFDGVHCENNINECTESSCFNGGTCVDGI 1006
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+ G + L EI +C+S+PCLN+ CV DG ++ C+C +TG+ CQ
Sbjct: 1007 NSFSCLCPVGFTGSFC-LHEINECSSHPCLNEGTCV-DGLGTYRCSCPLGYTGKNCQ--T 1062
Query: 149 SAACVTLNPCQNNATCVASPGEKQITCLC 177
+ +PC+N TCV E Q CLC
Sbjct: 1063 LVNLCSRSPCKNKGTCVQKKAESQ--CLC 1089
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
+ CL++PC GTC N + Y+C C + G NC+ + +C+SNPCLN G C D++
Sbjct: 759 NECLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDISGYT 818
Query: 99 ------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSAA 151
Y G+ + + C+ NPC N VC + N S+ C C + G+ C +
Sbjct: 819 CHCVLPYTGKNCQT-VLAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDID-E 876
Query: 152 CVTLNPCQNNATCVASPGEKQITC 175
C++ PC N+ C + G C
Sbjct: 877 CIS-KPCMNHGLCHNTQGSYMCEC 899
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 28/151 (18%)
Query: 10 TLCESDINECETVKDVCNYGICV----------NTNGNG---NSKVDHCLTDPCLGHGTC 56
LCE +I+ C+ D C++G C N G + ++D C + PCL G C
Sbjct: 565 VLCEENIDNCD--PDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRC 622
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
I+ + YQC C P SG NCE + DC+SNPC++ G+C+D + + G+ +
Sbjct: 623 IDLVNGYQCNCQPGTSGVNCEINFDDCASNPCIH-GICMDGINRYSCVCSPGFTGQRCNI 681
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTE 137
+I +C SNPC C++ N F C C E
Sbjct: 682 -DIDECASNPCRKGATCINGVN-GFRCICPE 710
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 12 CESDINECETVKDVC-NYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCI 57
CE DINEC + D C N C++ G +++ C ++PC+ +G C+
Sbjct: 453 CEMDINECHS--DPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQSNPCVNNGQCV 510
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
++ +R+QCLC P ++G C+ D DCSS PCLN C+D + G E
Sbjct: 511 DKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGVLCE-E 569
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
I +C +PC + DG S+ C C + G C + C + +PC N+ C+
Sbjct: 570 NIDNCDPDPCHHG--QCQDGIDSYTCICNPGYMGAICS-DQIDECYS-SPCLNDGRCI 623
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 5 PISLSTLCESDINECETVKDVC-NYGICVNTNG-------NGNS------KVDHCLTDPC 50
P C D++EC + C N G C N NG NG S +D C C
Sbjct: 288 PQWTGQFCTEDVDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASC 347
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW----EL 106
TCI+R + C+C +G C D+ C SNPC +C G+Y +
Sbjct: 348 TPGSTCIDRVASFSCMCPEGKAGLLCHLDDA-CISNPCHKGALCDTNPLNGQYICTCPQG 406
Query: 107 PEIRDCT----------SNPCLNDCVCVD-DGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+ DCT SNPC + CV+ DG +F+C C + + G C+ + +
Sbjct: 407 YKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AFHCECLKGYAGPRCEMDINE--CHS 462
Query: 156 NPCQNNATCVASPGEKQITCLCL 178
+PCQN+ATC+ G TCLC+
Sbjct: 463 DPCQNDATCLDKIG--GFTCLCM 483
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 42 VDHCLTDP--CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
VD CL P C GTC NR+ Y C+C +SG++C ++ DC+ C C+D V
Sbjct: 299 VDECLLQPNACQNGGTCANRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVA 358
Query: 100 -------KGRYWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFE-NS 149
+G+ L + D C SNPC +C + N + C C + + G C + +
Sbjct: 359 SFSCMCPEGKAGLLCHLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDE 418
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLCLK 179
A NPC++ CV + G C CLK
Sbjct: 419 CAMANSNPCEHAGKCVNTDGA--FHCECLK 446
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 53/115 (46%), Gaps = 11/115 (9%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK 100
++D C ++PC TC + Y+C C P Y G NCE + +C + PC N G C+D V
Sbjct: 1149 QLDECASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNH 1208
Query: 101 GRYWELPEIR---------DCTSNP-CLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
+ P R DC P CLN C+D + C C F GE C+
Sbjct: 1209 FKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRIG-GYSCRCLPGFAGERCE 1262
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 38/165 (23%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRY 71
CE+D+NEC+ + C +G GTC+N YQC C +
Sbjct: 179 CETDVNECD-IPGHCQHG------------------------GTCLNLPGSYQCQCPQGF 213
Query: 72 SGNNCEKDNGDCSSNPCLNDGVCVD-----------EVYKGRYWELPEIRDCTSNPCLND 120
+G C+ C+ +PC+N G C ++G E I DC ++ C N
Sbjct: 214 TGQYCDSLYVPCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCER-NIDDCPNHRCQNG 272
Query: 121 CVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
VCVD N ++ C C +TG++C + + N CQN TC
Sbjct: 273 GVCVDGVN-TYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCA 316
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C C GTC++ + + CLC ++G+ C + +CSS+PCLN+G CVD +
Sbjct: 988 INECTESSCFNGGTCVDGINSFSCLCPVGFTGSFCLHEINECSSHPCLNEGTCVDGLGTY 1047
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
Y G+ + + C+ +PC N CV S C C + G YC N
Sbjct: 1048 RCSCPLGYTGKNCQT-LVNLCSRSPCKNKGTCVQKKAES-QCLCPSGWAGAYCDVPN 1102
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCS-SNPCLNDGVCVD---- 96
D CL+ PC TC ++++ C C ++G CE D +C C + G C++
Sbjct: 145 TDACLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCLNLPGS 204
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ + G+Y + + C +PC+N C G+ +F CNC F G C+ N
Sbjct: 205 YQCQCPQGFTGQYCDSLYV-PCAPSPCVNGGTCRQTGDFTFECNCLPGFEGSTCE-RNID 262
Query: 151 ACVTLNPCQNNATCV 165
C + CQN CV
Sbjct: 263 DCPN-HRCQNGGVCV 276
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 116 PCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITC 175
PC+N+ +CV N + YC C E F GEYCQ + N CQN TCVA + TC
Sbjct: 34 PCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDP---CEKNRCQNGGTCVAQAMLGKATC 90
Query: 176 LC 177
C
Sbjct: 91 RC 92
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 5 PISLSTLCESDINECETVKDVCNYGICVNTNGNGNSK-------------VDHCLTDPCL 51
P + LCE +I++C N G C++ G + + ++ CL++PC
Sbjct: 1215 PGTRGLLCEENIDDCARGPHCLNGGQCMDRIGGYSCRCLPGFAGERCEGDINECLSNPCS 1274
Query: 52 GHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV 95
G+ CI ++ Y C+C ++G +CE C PCLN G C
Sbjct: 1275 SEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQMPCLNGGTCA 1320
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 87 PCLNDGVCVDEVYKGRYWELPE--------IRD-CTSNPCLNDCVCVDDGNLS-FYCNCT 136
PC+N+G+CV Y + PE RD C N C N CV L C C
Sbjct: 34 PCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDPCEKNRCQNGGTCVAQAMLGKATCRCA 93
Query: 137 EDFTGEYCQFENSAACVTLNPCQNNATC 164
FTGE CQ+ S C PC N TC
Sbjct: 94 SGFTGEDCQYSTSHPCFVSRPCLNGGTC 121
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 20/145 (13%)
Query: 48 DPCLGHGTCIN-RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW-- 104
+PC+ G C+ + C C + G C+ + C N C N G CV + G+
Sbjct: 33 EPCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRD-PCEKNRCQNGGTCVAQAMLGKATCR 91
Query: 105 ----------ELPEIRDC-TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACV 153
+ C S PCLN C ++ C C FTG+ CQ+ + AC+
Sbjct: 92 CASGFTGEDCQYSTSHPCFVSRPCLNGGTCHMLSRDTYECTCQVGFTGKECQWTD--ACL 149
Query: 154 TLNPCQNNATCVASPGEKQITCLCL 178
+ +PC N +TC Q +C CL
Sbjct: 150 S-HPCANGSTCTTV--ANQFSCKCL 171
>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus
GN=Notch2 PE=1 SV=1
Length = 2471
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
S+V+ CL+ PC+ HG C Y+CLC + G NCE D +C SNPC N G C + V
Sbjct: 719 SQVNECLSSPCI-HGNCTGGLSGYKCLCDAGWVGINCEVDKNECLSNPCQNGGTCNNLVN 777
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
+KG ++ I +C SNPCLN C+DD + + C+C +TG+ CQ
Sbjct: 778 GYRCTCKKGFKGYNCQV-NIDECASNPCLNQGTCLDDVS-GYTCHCMLPYTGKNCQ--TV 833
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
A + NPC+N A C +P + TCLC
Sbjct: 834 LAPCSPNPCENAAVCKEAPNFESFTCLC 861
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 42 VDHCL---TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
VD C ++PC G C+N + C C Y+G CE D +C S+PC ND C+D++
Sbjct: 416 VDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKI 475
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+KG + EL E+ +C SNPC+N+ CVD N F C C FTG CQ +
Sbjct: 476 GGFTCLCMPGFKGVHCEL-EVNECQSNPCVNNGQCVDKVN-RFQCLCPPGFTGPVCQIDI 533
Query: 149 SAACVTLNPCQNNATCVASP 168
T PC N A C+ P
Sbjct: 534 DDCSST--PCLNGAKCIDHP 551
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
VD C++ PC+ +G C N Y C C P +SG +CE+D DC +NPC N G CVD+V
Sbjct: 874 VDECVSKPCMNNGICHNTQGSYMCECPPGFSGMDCEEDINDCLANPCQNGGSCVDKVNTF 933
Query: 102 RYWELP---------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
LP ++ +C S PC N C D N S+ C C F G +C EN+
Sbjct: 934 SCLCLPGFVGDKCQTDMNECLSEPCKNGGTCSDYVN-SYTCTCPAGFHGVHC--ENNIDE 990
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
T + C N TCV G +CLC
Sbjct: 991 CTESSCFNGGTCVD--GINSFSCLC 1013
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 78/151 (51%), Gaps = 28/151 (18%)
Query: 10 TLCESDINECETVKDVCNYGICV----------NTNGNG---NSKVDHCLTDPCLGHGTC 56
TLC+ +I+ C+ D C++G C N G + ++D C + PCL G C
Sbjct: 565 TLCDENIDNCD--PDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRC 622
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
I+ + YQC C P SG NCE + DC+SNPCL+ G CVD + + G+ +
Sbjct: 623 IDLVNGYQCNCQPGTSGLNCEINFDDCASNPCLH-GACVDGINRYSCVCSPGFTGQRCNI 681
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTE 137
+I +C SNPC D C++D N F C C E
Sbjct: 682 -DIDECASNPCRKDATCINDVN-GFRCMCPE 710
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 81/182 (44%), Gaps = 41/182 (22%)
Query: 5 PISLSTL-CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRY 63
P S + CE DIN+ CL +PC G+C+++ + +
Sbjct: 900 PPGFSGMDCEEDIND--------------------------CLANPCQNGGSCVDKVNTF 933
Query: 64 QCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPEIRDCT 113
CLC P + G+ C+ D +C S PC N G C D V + G + E I +CT
Sbjct: 934 SCLCLPGFVGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCEN-NIDECT 992
Query: 114 SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQI 173
+ C N CVD N SF C C FTG +C + + + NPC N+ TCV G +
Sbjct: 993 ESSCFNGGTCVDGIN-SFSCLCPVGFTGPFCLHDINE--CSSNPCLNSGTCVDGLGTYRC 1049
Query: 174 TC 175
TC
Sbjct: 1050 TC 1051
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 14/144 (9%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
+ CL++PC GTC N + Y+C C + G NC+ + +C+SNPCLN G C+D+V
Sbjct: 759 NECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCLDDVSGYT 818
Query: 99 ------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSAA 151
Y G+ + + C+ NPC N VC + N SF C C + G+ C +
Sbjct: 819 CHCMLPYTGKNCQT-VLAPCSPNPCENAAVCKEAPNFESFTCLCAPGWQGQRCTVDVD-E 876
Query: 152 CVTLNPCQNNATCVASPGEKQITC 175
CV+ PC NN C + G C
Sbjct: 877 CVS-KPCMNNGICHNTQGSYMCEC 899
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 5 PISLSTLCESDINECETVKDVC-NYGICVNTNG-------NGNS------KVDHCLTDPC 50
P C D++EC + C N G C N NG NG S +D C C
Sbjct: 288 PQWTGQFCTEDVDECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAFASC 347
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW----EL 106
TCI+R + CLC +G C D+ C SNPC +C G+Y +
Sbjct: 348 TPGSTCIDRVASFSCLCPEGKAGLLCHLDDA-CISNPCHKGALCDTNPLNGQYICTCPQA 406
Query: 107 PEIRDCT----------SNPCLNDCVCVD-DGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+ DCT SNPC + CV+ DG +F+C C + + G C+ + +
Sbjct: 407 YKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AFHCECLKGYAGPRCEMDINE--CHS 462
Query: 156 NPCQNNATCVASPGEKQITCLCL 178
+PCQN+ATC+ G TCLC+
Sbjct: 463 DPCQNDATCLDKIG--GFTCLCM 483
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 29/177 (16%)
Query: 12 CESDINECETVKDVC-NYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCI 57
CE DINEC + D C N C++ G +V+ C ++PC+ +G C+
Sbjct: 453 CEMDINECHS--DPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQSNPCVNNGQCV 510
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD-------EVYKGRYWEL--PE 108
++ +R+QCLC P ++G C+ D DCSS PCLN C+D + G L
Sbjct: 511 DKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGTLCDEN 570
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
I +C +PC + DG S+ C C + G C + C + +PC N+ C+
Sbjct: 571 IDNCDPDPCHHG--QCQDGIDSYTCICNPGYMGAICS-DQIDECYS-SPCLNDGRCI 623
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRY 71
C++DINEC+ + C +G GTC+N Y+C C R+
Sbjct: 179 CDADINECD-IPGRCQHG------------------------GTCLNLPGSYRCQCPQRF 213
Query: 72 SGNNCEKDNGDCSSNPCLNDGVCVD-----------EVYKGRYWELPEIRDCTSNPCLND 120
+G +C+ C+ +PC+N G C ++G E I DC ++ C N
Sbjct: 214 TGQHCDSPYVPCAPSPCVNGGTCRQTGDFTSECHCLPGFEGSNCER-NIDDCPNHKCQNG 272
Query: 121 CVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
VCVD N ++ C C +TG++C + + N CQN TC
Sbjct: 273 GVCVDGVN-TYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCT 316
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 25/148 (16%)
Query: 22 VKDVCNY-GICVNTNGNGN-------------SKVDHCLTDPCLGHGTCINRSDRYQCLC 67
V+ +C + GIC+N + ++D C ++PC TC + Y+C C
Sbjct: 1116 VEHLCQHSGICINAGNTHHCQCPLGYTGSYCEEQLDECASNPCQHGATCSDFIGGYRCEC 1175
Query: 68 TPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIR---------DCTSNP-C 117
P Y G NCE + +C + PC N G C+D V + P R DC P C
Sbjct: 1176 VPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCAGAPHC 1235
Query: 118 LNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
LN CVD + C C F GE C+
Sbjct: 1236 LNGGQCVDRIG-GYSCRCLPGFAGERCE 1262
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSK-------------VDHCLTDP--CLGHGTC 56
CE +I++C K N G+CV+ N + VD CL P C GTC
Sbjct: 257 CERNIDDCPNHK-CQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTC 315
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY-------KGRYWELPEI 109
NR+ Y C+C +SG++C ++ DC+ C C+D V +G+ L +
Sbjct: 316 TNRNGGYGCVCVNGWSGDDCSENIDDCAFASCTPGSTCIDRVASFSCLCPEGKAGLLCHL 375
Query: 110 RD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFE-NSAACVTLNPCQNNATCVA 166
D C SNPC +C + N + C C + + G C + + A NPC++ CV
Sbjct: 376 DDACISNPCHKGALCDTNPLNGQYICTCPQAYKGADCTEDVDECAMANSNPCEHAGKCVN 435
Query: 167 SPGEKQITCLCLK 179
+ G C CLK
Sbjct: 436 TDGA--FHCECLK 446
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 5 PISLSTLCESDINEC--------ETVKDVCNYGICVNTNG----NGNSKVDHCLTDPCLG 52
P + C++D+NEC T D N C G + + +D C C
Sbjct: 939 PGFVGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFN 998
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGR 102
GTC++ + + CLC ++G C D +CSSNPCLN G CVD + Y G+
Sbjct: 999 GGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNSGTCVDGLGTYRCTCPLGYTGK 1058
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+ + C+ +PC N C + C C + G YC N
Sbjct: 1059 NCQT-LVNLCSPSPCKNKGTCAQE-KARPRCLCPPGWDGAYCDVLN 1102
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 62/156 (39%), Gaps = 42/156 (26%)
Query: 5 PISLSTLCESDINECETVKDVCNYGICVNTNGNGNSK-------------VDHCLTDPCL 51
P + LCE +I++C N G CV+ G + + ++ CL++PC
Sbjct: 1215 PGTRGLLCEENIDDCAGAPHCLNGGQCVDRIGGYSCRCLPGFAGERCEGDINECLSNPCS 1274
Query: 52 GHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEI 109
G+ CI + YQC+C ++G +CE C PCLN G C
Sbjct: 1275 SEGSLDCIQLKNNYQCVCRSAFTGRHCETFLDVCPQKPCLNGGTCA-------------- 1320
Query: 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
SN V DG F C C F+G CQ
Sbjct: 1321 --VASN--------VPDG---FICRCPPGFSGARCQ 1343
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 14/135 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCS-SNPCLNDGVCVD---- 96
D CL+ PC TC + ++++ C C +G C+ D +C C + G C++
Sbjct: 145 TDVCLSHPCENGSTCSSVANQFSCRCPAGITGQKCDADINECDIPGRCQHGGTCLNLPGS 204
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ + G++ + P + C +PC+N C G+ + C+C F G C+ N
Sbjct: 205 YRCQCPQRFTGQHCDSPYV-PCAPSPCVNGGTCRQTGDFTSECHCLPGFEGSNCE-RNID 262
Query: 151 ACVTLNPCQNNATCV 165
C + CQN CV
Sbjct: 263 DCPN-HKCQNGGVCV 276
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 87 PCLNDGVCVDEVYKGRYWELPE--------IRD-CTSNPCLNDCVCVDDGNLS-FYCNCT 136
PC+N+G CV Y PE RD C N C N CV L C C
Sbjct: 34 PCVNEGTCVTYHNGTGYCRCPEGFLGEYCQHRDPCEKNRCQNGGTCVTQAMLGKATCRCA 93
Query: 137 EDFTGEYCQFENSAACVTLNPCQNNATC 164
FTGE CQ+ S C PCQN TC
Sbjct: 94 PGFTGEDCQYSTSHPCFVSRPCQNGGTC 121
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 116 PCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITC 175
PC+N+ CV N + YC C E F GEYCQ + N CQN TCV + TC
Sbjct: 34 PCVNEGTCVTYHNGTGYCRCPEGFLGEYCQHRDP---CEKNRCQNGGTCVTQAMLGKATC 90
Query: 176 LC 177
C
Sbjct: 91 RC 92
>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2
Length = 1064
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 90/180 (50%), Gaps = 28/180 (15%)
Query: 9 STLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGT 55
+ C+ +I+EC + N G+CV+ T N +++D C + PCL G
Sbjct: 702 AVRCQINIDECASAP-CQNGGVCVDGVNGYVCNCAPGYTGDNCETEIDECASMPCLNGGA 760
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWE 105
CI + Y C C Y+G CE D +C+S PC N GVC D + + G E
Sbjct: 761 CIEMVNGYTCQCVAGYTGVICETDIDECASAPCQNGGVCTDTINGYICACVPGFTGSNCE 820
Query: 106 LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
I +C S+PCLN +CVD N F C C +++G YC+ AC ++ PCQN ATCV
Sbjct: 821 T-NIDECASDPCLNGGICVDGVN-GFVCQCPPNYSGTYCEISLD-ACRSM-PCQNGATCV 876
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 88/182 (48%), Gaps = 24/182 (13%)
Query: 5 PISLSTLCESDINECE--------TVKDVCNYGICVNTNGNGNSK----VDHCLTDPCLG 52
P LCE+DINEC T D N +CV S D C + PCL
Sbjct: 546 PGYTGVLCETDINECASFPCLNGGTCNDQVNGYVCVCAQDTSVSTCETDRDECASAPCLN 605
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP----- 107
G C++ + + C C P + G NCE + +C+S+PC+N G+CVD+V + LP
Sbjct: 606 GGACMDVVNGFVCTCLPGWEGTNCEINTDECASSPCMNGGLCVDQVNSYVCFCLPGFTGI 665
Query: 108 ----EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNAT 163
EI +C S+PCLN C+D + S+ C C +T CQ N C + PCQN
Sbjct: 666 HCGTEIDECASSPCLNGGQCIDRVD-SYECVCAAGYTAVRCQI-NIDECASA-PCQNGGV 722
Query: 164 CV 165
CV
Sbjct: 723 CV 724
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 93/189 (49%), Gaps = 30/189 (15%)
Query: 12 CESDINECETVKDVCNYGICVN-TNGNG------------NSKVDHCLTDPCLGHGTCIN 58
CE++I+EC ++ + N G C+ NG + +D C + PC G C +
Sbjct: 743 CETEIDECASMPCL-NGGACIEMVNGYTCQCVAGYTGVICETDIDECASAPCQNGGVCTD 801
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+ Y C C P ++G+NCE + +C+S+PCLN G+CVD V Y G Y E+
Sbjct: 802 TINGYICACVPGFTGSNCETNIDECASDPCLNGGICVDGVNGFVCQCPPNYSGTYCEI-S 860
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASP 168
+ C S PC N CV+ G + C C + G+ C+ + + C +L PCQN C+
Sbjct: 861 LDACRSMPCQNGATCVNVG-ADYVCECVPGYAGQNCEIDIN-ECASL-PCQNGGLCI--D 915
Query: 169 GEKQITCLC 177
G TC C
Sbjct: 916 GIAGYTCQC 924
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 88/188 (46%), Gaps = 28/188 (14%)
Query: 12 CESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGTCIN 58
CE++INEC + + N GICV+ T +D C + PC G CI+
Sbjct: 249 CENNINECASSPCL-NGGICVDGVNMFECTCLAGFTGVRCEVNIDECASAPCQNGGICID 307
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK-----GRYWELPE----I 109
+ Y C C +SG+NCE ++ +CSS PCLN G CVD V W P I
Sbjct: 308 GINGYTCSCPLGFSGDNCENNDDECSSIPCLNGGTCVDLVNAYMCVCAPGWTGPTCADNI 367
Query: 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPG 169
+C S PC N VC+D N + C+C +TG +C+ + PCQN CV G
Sbjct: 368 DECASAPCQNGGVCIDGVN-GYMCDCQPGYTGTHCETDIDEC--ARPPCQNGGDCV--DG 422
Query: 170 EKQITCLC 177
C+C
Sbjct: 423 VNGYVCIC 430
Score = 76.6 bits (187), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 14/134 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+D C +DPC G C++ + Y C C P + G+ CE + +C+S+PCLN G+CVD V
Sbjct: 215 IDECASDPCQNGGACVDGVNGYVCNCVPGFDGDECENNINECASSPCLNGGICVDGVNMF 274
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
+ G E+ I +C S PC N +C+D N + C+C F+G+ C+ N
Sbjct: 275 ECTCLAGFTGVRCEV-NIDECASAPCQNGGICIDGIN-GYTCSCPLGFSGDNCE-NNDDE 331
Query: 152 CVTLNPCQNNATCV 165
C ++ PC N TCV
Sbjct: 332 CSSI-PCLNGGTCV 344
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
+++D C + PCL G CI+R D Y+C+C Y+ C+ + +C+S PC N GVCVD V
Sbjct: 669 TEIDECASSPCLNGGQCIDRVDSYECVCAAGYTAVRCQINIDECASAPCQNGGVCVDGVN 728
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y G E EI +C S PCLN C++ N + C C +TG C+ +
Sbjct: 729 GYVCNCAPGYTGDNCET-EIDECASMPCLNGGACIEMVN-GYTCQCVAGYTGVICETDID 786
Query: 150 AACVTLNPCQNNATCV 165
C + PCQN C
Sbjct: 787 -ECASA-PCQNGGVCT 800
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
+ +D C PC G C++ + Y C+C P + G NCE + +C+S PC N VCVD V
Sbjct: 403 TDIDECARPPCQNGGDCVDGVNGYVCICAPGFDGLNCENNIDECASRPCQNGAVCVDGVN 462
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y G E +I +C S PCLN VC D N + C C F G C+ ++
Sbjct: 463 GFVCTCSAGYTGVLCET-DINECASMPCLNGGVCTDLVN-GYICTCAAGFEGTNCE-TDT 519
Query: 150 AACVTLNPCQNNATCV 165
C + PCQN ATC
Sbjct: 520 DECASF-PCQNGATCT 534
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 84/191 (43%), Gaps = 26/191 (13%)
Query: 9 STLCESDINECETV--------KDVCNYGICVNTNG----NGNSKVDHCLTDPCLGHGTC 56
LCE+DINEC ++ D+ N IC G N + D C + PC TC
Sbjct: 474 GVLCETDINECASMPCLNGGVCTDLVNGYICTCAAGFEGTNCETDTDECASFPCQNGATC 533
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--------YKGRYWELPE 108
++ + Y C C P Y+G CE D +C+S PCLN G C D+V
Sbjct: 534 TDQVNGYVCTCVPGYTGVLCETDINECASFPCLNGGTCNDQVNGYVCVCAQDTSVSTCET 593
Query: 109 IRD-CTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVAS 167
RD C S PCLN C+D N F C C + G C+ N+ C + +PC N CV
Sbjct: 594 DRDECASAPCLNGGACMDVVN-GFVCTCLPGWEGTNCEI-NTDECAS-SPCMNGGLCVDQ 650
Query: 168 PGEKQITCLCL 178
C CL
Sbjct: 651 --VNSYVCFCL 659
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 20 ETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79
T +++ N G + + +G D C + C C + + Y C C P ++G NCE D
Sbjct: 159 STDRNIVNRGFRITFSSDG----DDCDPNLCQNGAACTDLVNDYACTCPPGFTGRNCEID 214
Query: 80 NGDCSSNPCLNDGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNL 129
+C+S+PC N G CVD V + G E I +C S+PCLN +CVD N+
Sbjct: 215 IDECASDPCQNGGACVDGVNGYVCNCVPGFDGDECE-NNINECASSPCLNGGICVDGVNM 273
Query: 130 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
F C C FTG C+ N C + PCQN C+
Sbjct: 274 -FECTCLAGFTGVRCEV-NIDECASA-PCQNGGICI 306
>sp|P07207|NOTCH_DROME Neurogenic locus Notch protein OS=Drosophila melanogaster GN=N PE=1
SV=3
Length = 2703
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 78/149 (52%), Gaps = 15/149 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+D C ++PC GTC ++ + + C C P Y+G CE + DC +NPC N G C+D+V
Sbjct: 792 IDECSSNPCQHGGTCYDKLNAFSCQCMPGYTGQKCETNIDDCVTNPCGNGGTCIDKVNGY 851
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGN-LSFYCNCTEDFTGEYCQFENSA 150
+ GR E ++ C SN C N+ C N L F C C +TG YC E+
Sbjct: 852 KCVCKVPFTGRDCE-SKMDPCASNRCKNEAKCTPSSNFLDFSCTCKLGYTGRYCD-EDID 909
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLCLK 179
C +PC+N A+C+ PG + CLC K
Sbjct: 910 ECSLSSPCRNGASCLNVPGSYR--CLCTK 936
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 99/183 (54%), Gaps = 28/183 (15%)
Query: 5 PISLSTLCESDINECETVKDVCNY-GICVNTNGN-------GNS------KVDHCLTDPC 50
P +C+ INECE+ + C + G C + G+ G S V+ C ++PC
Sbjct: 629 PGYTGYICQKQINECES--NPCQFDGHCQDRVGSYYCQCQAGTSGKNCEVNVNECHSNPC 686
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--YK-----GRY 103
TCI+ + Y+C C P ++G +CEK+ +C S+PC N+GVC+D+V YK G Y
Sbjct: 687 NNGATCIDGINSYKCQCVPGFTGQHCEKNVDECISSPCANNGVCIDQVNGYKCECPRGFY 746
Query: 104 WE--LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNN 161
L ++ +C SNPC+N+ C +DG F C+C +TG+ C+ + + NPCQ+
Sbjct: 747 DAHCLSDVDECASNPCVNEGRC-EDGINEFICHCPPGYTGKRCELDIDE--CSSNPCQHG 803
Query: 162 ATC 164
TC
Sbjct: 804 GTC 806
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 76/158 (48%), Gaps = 25/158 (15%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
C DI+EC+ + GICVNT G+ + ++ C + PC G+C++
Sbjct: 446 CSEDIDECDQGSPCEHNGICVNTPGSYRCNCSQGFTGPRCETNINECESHPCQNEGSCLD 505
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
++C+C P ++G CE D +C SNPCLNDG C D++ + G ++
Sbjct: 506 DPGTFRCVCMPGFTGTQCEIDIDECQSNPCLNDGTCHDKINGFKCSCALGFTGARCQI-N 564
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
I DC S PC N +C D + C C +TG C+
Sbjct: 565 IDDCQSQPCRNRGIC-HDSIAGYSCECPPGYTGTSCEI 601
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 15/134 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C ++PC G CI+ + ++CLC P Y+G C+K +C SNPC DG C D V
Sbjct: 603 INDCDSNPCH-RGKCIDDVNSFKCLCDPGYTGYICQKQINECESNPCQFDGHCQDRVGSY 661
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
G+ E+ + +C SNPC N C+D N S+ C C FTG++C+ +N
Sbjct: 662 YCQCQAGTSGKNCEV-NVNECHSNPCNNGATCIDGIN-SYKCQCVPGFTGQHCE-KNVDE 718
Query: 152 CVTLNPCQNNATCV 165
C++ +PC NN C+
Sbjct: 719 CIS-SPCANNGVCI 731
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 5 PISLSTLCESDINECE--------TVKDVCNYGICVNTNGNGNSK----VDHCLTDPCLG 52
P T CE DI+EC+ T D N C G ++ +D C + PC
Sbjct: 516 PGFTGTQCEIDIDECQSNPCLNDGTCHDKINGFKCSCALGFTGARCQINIDDCQSQPCRN 575
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGR 102
G C + Y C C P Y+G +CE + DC SNPC + G C+D+V Y G
Sbjct: 576 RGICHDSIAGYSCECPPGYTGTSCEININDCDSNPC-HRGKCIDDVNSFKCLCDPGYTG- 633
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA 162
Y +I +C SNPC D C D S+YC C +G+ C+ N C + NPC N A
Sbjct: 634 YICQKQINECESNPCQFDGHCQDRVG-SYYCQCQAGTSGKNCEV-NVNECHS-NPCNNGA 690
Query: 163 TCV 165
TC+
Sbjct: 691 TCI 693
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----- 96
++ C ++PC GTC+N YQC+C Y+G +C+ CS +PC N G+C
Sbjct: 218 IEECQSNPCKYGGTCVNTHGSYQCMCPTGYTGKDCDTKYKPCSPSPCQNGGICRSNGLSY 277
Query: 97 -----EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
+ ++G+ E DC + C N C+ DG + C C +FTG +CQ +
Sbjct: 278 ECKCPKGFEGKNCEQ-NYDDCLGHLCQNGGTCI-DGISDYTCRCPPNFTGRFCQDDVDEC 335
Query: 152 CVTLNP-CQNNATCVASPGEKQITCLCL 178
+P CQN ATC + G +C+C+
Sbjct: 336 AQRDHPVCQNGATCTNTHGS--YSCICV 361
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 4 KPISLSTLCESDINECETVKDVCNYGICVNTNGNGNS----KVDHCLTDPCLGHGTCINR 59
K +SL LC + T KD N +C + G S ++D C + PC GTC +
Sbjct: 1147 KGLSLRQLCNNG-----TCKDYGNSHVCYCSQGYAGSYCQKEIDECQSQPCQNGGTCRDL 1201
Query: 60 SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY-------KGRYWELPEIR-- 110
Y+C C + G NCE + DC+ NPC N G C D V G + EI
Sbjct: 1202 IGAYECQCRQGFQGQNCELNIDDCAPNPCQNGGTCHDRVMNFSCSCPPGTMGIICEINKD 1261
Query: 111 DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNAT 163
DC C N+ C+D F C C F G C+ + + C++ NPC N T
Sbjct: 1262 DCKPGACHNNGSCIDRVG-GFECVCQPGFVGARCEGDIN-ECLS-NPCSNAGT 1311
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 42 VDHC-LTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
+D C L+ PC +C+N Y+CLCT Y G +C + DC+S PC N G C+D +
Sbjct: 908 IDECSLSSPCRNGASCLNVPGSYRCLCTKGYEGRDCAINTDDCASFPCQNGGTCLDGIGD 967
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ G++ E +I +C S PC N C N S+ C C F+G CQ N
Sbjct: 968 YSCLCVDGFDGKHCET-DINECLSQPCQNGATCSQYVN-SYTCTCPLGFSGINCQ-TNDE 1024
Query: 151 ACVTLNPCQNNATCV 165
C T + C N +C+
Sbjct: 1025 DC-TESSCLNGGSCI 1038
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 27/176 (15%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
C+ DI+EC N C+N G+ D C + PC GTC++
Sbjct: 904 CDEDIDECSLSSPCRNGASCLNVPGSYRCLCTKGYEGRDCAINTDDCASFPCQNGGTCLD 963
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
Y CLC + G +CE D +C S PC N C V + G + +
Sbjct: 964 GIGDYSCLCVDGFDGKHCETDINECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQTND 1023
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATC 164
DCT + CLN C+D N + C+C ++G CQ++ + NPC N ATC
Sbjct: 1024 -EDCTESSCLNGGSCIDGIN-GYNCSCLAGYSGANCQYKLNK--CDSNPCLNGATC 1075
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 42 VDHCLTDPCLGHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC----- 94
++ CL++PC GT C+ + Y C C P + G +CE C+ +PC N G C
Sbjct: 1298 INECLSNPCSNAGTLDCVQLVNNYHCNCRPGHMGRHCEHKVDFCAQSPCQNGGNCNIRQS 1357
Query: 95 -----VDEVYKGRYWELPEIRDCTSNPC-LNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+ + G+ EL +DC SNPC + +CV D+G + C C GE+C+ +
Sbjct: 1358 GHHCICNNGFYGKNCEL-SGQDCDSNPCRVGNCVVADEG-FGYRCECPRGTLGEHCEIDT 1415
Query: 149 SAACVTLNPCQNNATCVASPGEKQITCLC 177
C + NPC A C G+ + CLC
Sbjct: 1416 LDEC-SPNPCAQGAACEDLLGDYE--CLC 1441
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 86/237 (36%), Gaps = 70/237 (29%)
Query: 5 PISLSTLCESDINECETVKDVCNYG-ICVNTNGNG-------------NSKVDHCLTDPC 50
P C DI EC++ + C YG CVNT+G+ ++K C PC
Sbjct: 207 PGFTGDTCSYDIEECQS--NPCKYGGTCVNTHGSYQCMCPTGYTGKDCDTKYKPCSPSPC 264
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YK 100
G C + Y+C C + G NCE++ DC + C N G C+D + +
Sbjct: 265 QNGGICRSNGLSYECKCPKGFEGKNCEQNYDDCLGHLCQNGGTCIDGISDYTCRCPPNFT 324
Query: 101 GRY------------------------------------WELPE----IRDCTSNPCLND 120
GR+ W + DC C
Sbjct: 325 GRFCQDDVDECAQRDHPVCQNGATCTNTHGSYSCICVNGWAGLDCSNNTDDCKQAACFYG 384
Query: 121 CVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
C+ DG SFYC CT+ TG C +++ T NPC +A C SP C C
Sbjct: 385 ATCI-DGVGSFYCQCTKGKTGLLCHLDDA---CTSNPCHADAICDTSPINGSYACSC 437
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 5 PISLSTLCESDINEC-ETVKDVCNYGI-CVNTNG-------NG------NSKVDHCLTDP 49
P C+ D++EC + VC G C NT+G NG ++ D C
Sbjct: 321 PNFTGRFCQDDVDECAQRDHPVCQNGATCTNTHGSYSCICVNGWAGLDCSNNTDDCKQAA 380
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY------ 103
C TCI+ + C CT +G C D+ C+SNPC D +C G Y
Sbjct: 381 CFYGATCIDGVGSFYCQCTKGKTGLLCHLDDA-CTSNPCHADAICDTSPINGSYACSCAT 439
Query: 104 -WE----LPEIRDC-TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNP 157
++ +I +C +PC ++ +CV+ S+ CNC++ FTG C+ N C + +P
Sbjct: 440 GYKGVDCSEDIDECDQGSPCEHNGICVNTPG-SYRCNCSQGFTGPRCE-TNINECES-HP 496
Query: 158 CQNNATCVASPGEKQITCL 176
CQN +C+ PG + C+
Sbjct: 497 CQNEGSCLDDPGTFRCVCM 515
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Query: 45 CLTDPCLGHGTC--INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
C + PC TC + S + C C P ++G+ C D +C SNPC G CV+
Sbjct: 181 CASSPCRNGATCTALAGSSSFTCSCPPGFTGDTCSYDIEECQSNPCKYGGTCVNTHGSYQ 240
Query: 99 ------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
Y G+ + + + C+ +PC N +C +G LS+ C C + F G+ C+ +N C
Sbjct: 241 CMCPTGYTGKDCDT-KYKPCSPSPCQNGGICRSNG-LSYECKCPKGFEGKNCE-QNYDDC 297
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
+ + CQN TC+ G TC C
Sbjct: 298 LG-HLCQNGGTCID--GISDYTCRC 319
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 68/168 (40%), Gaps = 26/168 (15%)
Query: 4 KPISLSTLCESDINECET-----------VKDVCNYGICVNTNGNGNS---KVDHCLTDP 49
+P + CE DINEC + V+ V NY G KVD C P
Sbjct: 1286 QPGFVGARCEGDINECLSNPCSNAGTLDCVQLVNNYHCNCRPGHMGRHCEHKVDFCAQSP 1345
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPC-LNDGVCVDEVYK-------- 100
C G C R + C+C + G NCE DC SNPC + + V DE +
Sbjct: 1346 CQNGGNCNIRQSGHHCICNNGFYGKNCELSGQDCDSNPCRVGNCVVADEGFGYRCECPRG 1405
Query: 101 --GRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
G + E+ + +C+ NPC C +D + C C + G+ C
Sbjct: 1406 TLGEHCEIDTLDECSPNPCAQGAAC-EDLLGDYECLCPSKWKGKRCDI 1452
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 12 CESDINEC--------ETVKDVCNYGICVNTNG----NGNSKVDHCLTDPCLGHGTCINR 59
CE+DINEC T N C G N + + C CL G+CI+
Sbjct: 981 CETDINECLSQPCQNGATCSQYVNSYTCTCPLGFSGINCQTNDEDCTESSCLNGGSCIDG 1040
Query: 60 SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE----------VYKGRYWELPEI 109
+ Y C C YSG NC+ C SNPCLN C ++ + G+ + E
Sbjct: 1041 INGYNCSCLAGYSGANCQYKLNKCDSNPCLNGATCHEQNNEYTCHCPSGFTGK--QCSEY 1098
Query: 110 RD-CTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
D C +PC N C + F C C+ +TG+ C +
Sbjct: 1099 VDWCGQSPCENGATCSQMKH-QFSCKCSAGWTGKLCDVQ 1136
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 59/148 (39%), Gaps = 19/148 (12%)
Query: 45 CLTDPCLGHGTCINR-SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY 103
C + C GTC+ + + + C C Y G+ CE N C+S C N G C GR
Sbjct: 62 CTSVGCQNGGTCVTQLNGKTYCACDSHYVGDYCEHRN-PCNSMRCQNGGTCQVTFRNGRP 120
Query: 104 W--------------ELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
E+ C CLN C + C C +TGE C+ +N
Sbjct: 121 GISCKCPLGFDESLCEIAVPNACDHVTCLNGGTCQLKTLEEYTCACANGYTGERCETKNL 180
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
A +PC+N ATC A G TC C
Sbjct: 181 CAS---SPCRNGATCTALAGSSSFTCSC 205
>sp|P0C6B8|SVEP1_RAT Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Rattus norvegicus GN=Svep1
PE=1 SV=1
Length = 3564
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 86/177 (48%), Gaps = 28/177 (15%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
CE+DI+EC ++ N GIC + G ++ C + PCL GTC +
Sbjct: 1223 CETDIDECSSLP-CLNGGICRDKVGGFTCECSSGYTGQICEENINECSSSPCLNKGTCTD 1281
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
Y+C C Y G +CE D +C S+PCLN+ VC D+V + G E
Sbjct: 1282 GLASYRCTCVSGYVGVHCETDVNECQSSPCLNNAVCKDQVGGFSCKCPPGFLGTRCEK-N 1340
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ +C S PC N C D N SF C C FTG +C+ N C + NPC+N ATCV
Sbjct: 1341 VDECLSQPCQNGATCKDGAN-SFRCQCPAGFTGPHCEL-NINECQS-NPCRNQATCV 1394
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV------ 98
C +PC GTC Y CLC P Y+G CE D +CSS PCLN G+C D+V
Sbjct: 1192 CFLNPCHNSGTCQQLGRGYVCLCPPGYTGLKCETDIDECSSLPCLNGGICRDKVGGFTCE 1251
Query: 99 ----YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154
Y G+ E I +C+S+PCLN C DG S+ C C + G +C E
Sbjct: 1252 CSSGYTGQICE-ENINECSSSPCLNKGTCT-DGLASYRCTCVSGYVGVHC--ETDVNECQ 1307
Query: 155 LNPCQNNATC 164
+PC NNA C
Sbjct: 1308 SSPCLNNAVC 1317
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 24/163 (14%)
Query: 11 LCESDINECETV----KDVCNYGI------CVN--TNGNGNSKVDHCLTDPCLGHGTCIN 58
+CE +INEC + K C G+ CV+ + + V+ C + PCL + C +
Sbjct: 1260 ICEENINECSSSPCLNKGTCTDGLASYRCTCVSGYVGVHCETDVNECQSSPCLNNAVCKD 1319
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+ + C C P + G CEK+ +C S PC N C D + G + EL
Sbjct: 1320 QVGGFSCKCPPGFLGTRCEKNVDECLSQPCQNGATCKDGANSFRCQCPAGFTGPHCEL-N 1378
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
I +C SNPC N CVD+ N S+ C C F+G C+ E +
Sbjct: 1379 INECQSNPCRNQATCVDELN-SYSCKCRPGFSGRRCETEQPSG 1420
Score = 39.3 bits (90), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 82 DCSSNPCLNDGVCVD----------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSF 131
+C NPC N G C Y G E +I +C+S PCLN +C D F
Sbjct: 1191 ECFLNPCHNSGTCQQLGRGYVCLCPPGYTGLKCET-DIDECSSLPCLNGGICRDKVG-GF 1248
Query: 132 YCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCL 176
C C+ +TG+ C+ EN C + +PC N TC + TC+
Sbjct: 1249 TCECSSGYTGQICE-ENINECSS-SPCLNKGTCTDGLASYRCTCV 1291
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 12/88 (13%)
Query: 5 PISLSTLCESDINEC--------ETVKDVCNYGICVNTNGNGNSK----VDHCLTDPCLG 52
P L T CE +++EC T KD N C G ++ C ++PC
Sbjct: 1330 PGFLGTRCEKNVDECLSQPCQNGATCKDGANSFRCQCPAGFTGPHCELNINECQSNPCRN 1389
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDN 80
TC++ + Y C C P +SG CE +
Sbjct: 1390 QATCVDELNSYSCKCRPGFSGRRCETEQ 1417
>sp|O35516|NOTC2_MOUSE Neurogenic locus notch homolog protein 2 OS=Mus musculus GN=Notch2
PE=1 SV=1
Length = 2470
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 80/148 (54%), Gaps = 15/148 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
S+V+ CL++PC+ HG C Y+CLC + G NCE D +C SNPC N G C + V
Sbjct: 717 SQVNECLSNPCI-HGNCTGGLSGYKCLCDAGWVGVNCEVDKNECLSNPCQNGGTCNNLVN 775
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
+KG ++ I +C SNPCLN C DD + + C+C +TG+ CQ
Sbjct: 776 GYRCTCKKGFKGYNCQV-NIDECASNPCLNQGTCFDDVS-GYTCHCMLPYTGKNCQ--TV 831
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
A + NPC+N A C +P + +CLC
Sbjct: 832 LAPCSPNPCENAAVCKEAPNFESFSCLC 859
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 17/140 (12%)
Query: 42 VDHCL---TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
VD C ++PC G C+N + C C Y+G CE D +C S+PC ND C+D++
Sbjct: 414 VDECAMANSNPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHSDPCQNDATCLDKI 473
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+KG + EL E+ +C SNPC+N+ CVD N F C C FTG CQ +
Sbjct: 474 GGFTCLCMPGFKGVHCEL-EVNECQSNPCVNNGQCVDKVN-RFQCLCPPGFTGPVCQIDI 531
Query: 149 SAACVTLNPCQNNATCVASP 168
T PC N A C+ P
Sbjct: 532 DDCSST--PCLNGAKCIDHP 549
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
VD C++ PC+ +G C N Y C C P +SG +CE+D DC +NPC N G CVD V
Sbjct: 872 VDECISKPCMNNGVCHNTQGSYVCECPPGFSGMDCEEDINDCLANPCQNGGSCVDHVNTF 931
Query: 99 ----YKGRYWE--LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
+ G + ++ +C S PC N C D N S+ C C F G +C EN+
Sbjct: 932 SCQCHPGFIGDKCQTDMNECLSEPCKNGGTCSDYVN-SYTCTCPAGFHGVHC--ENNIDE 988
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
T + C N TCV G +CLC
Sbjct: 989 CTESSCFNGGTCVD--GINSFSCLC 1011
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 95/198 (47%), Gaps = 33/198 (16%)
Query: 5 PISLSTL-CESDINECETVKDVC-NYGICVN-------------TNGNGNSKVDHCLTDP 49
P S + CE DIN+C + + C N G CV+ + ++ CL++P
Sbjct: 898 PPGFSGMDCEEDINDC--LANPCQNGGSCVDHVNTFSCQCHPGFIGDKCQTDMNECLSEP 955
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------Y 99
C GTC + + Y C C + G +CE + +C+ + C N G CVD + +
Sbjct: 956 CKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCFNGGTCVDGINSFSCLCPVGF 1015
Query: 100 KGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQ 159
G + L +I +C+SNPCLN CV DG ++ C C +TG+ CQ + +PC+
Sbjct: 1016 TGPFC-LHDINECSSNPCLNAGTCV-DGLGTYRCICPLGYTGKNCQ--TLVNLCSRSPCK 1071
Query: 160 NNATCVASPGEKQITCLC 177
N TCV + + CLC
Sbjct: 1072 NKGTCVQE--KARPHCLC 1087
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
+ CL++PC GTC N + Y+C C + G NC+ + +C+SNPCLN G C D+V
Sbjct: 757 NECLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECASNPCLNQGTCFDDVSGYT 816
Query: 99 ------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSAA 151
Y G+ + + C+ NPC N VC + N SF C C + G+ C +
Sbjct: 817 CHCMLPYTGKNCQT-VLAPCSPNPCENAAVCKEAPNFESFSCLCAPGWQGKRCTVDVD-E 874
Query: 152 CVTLNPCQNNATCVASPG 169
C++ PC NN C + G
Sbjct: 875 CIS-KPCMNNGVCHNTQG 891
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 28/150 (18%)
Query: 11 LCESDINECETVKDVCNYGICV----------NTNGNG---NSKVDHCLTDPCLGHGTCI 57
LC+ +I+ C+ D C++G C N G + ++D C + PCL G CI
Sbjct: 564 LCDENIDNCD--PDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYSSPCLNDGRCI 621
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
+ + YQC C P SG NCE + DC+SNPC++ GVCVD + + G+ +
Sbjct: 622 DLVNGYQCNCQPGTSGLNCEINFDDCASNPCMH-GVCVDGINRYSCVCSPGFTGQRCNI- 679
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTE 137
+I +C SNPC C++D N F C C E
Sbjct: 680 DIDECASNPCRKGATCINDVN-GFRCICPE 708
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 84/177 (47%), Gaps = 29/177 (16%)
Query: 12 CESDINECETVKDVC-NYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCI 57
CE DINEC + D C N C++ G +V+ C ++PC+ +G C+
Sbjct: 451 CEMDINECHS--DPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQSNPCVNNGQCV 508
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD-------EVYKGRYWEL--PE 108
++ +R+QCLC P ++G C+ D DCSS PCLN C+D + G L
Sbjct: 509 DKVNRFQCLCPPGFTGPVCQIDIDDCSSTPCLNGAKCIDHPNGYECQCATGFTGILCDEN 568
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
I +C +PC + DG S+ C C + G C + C + +PC N+ C+
Sbjct: 569 IDNCDPDPCHHG--QCQDGIDSYTCICNPGYMGAICS-DQIDECYS-SPCLNDGRCI 621
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 89/203 (43%), Gaps = 36/203 (17%)
Query: 5 PISLSTLCESDINECETVKDVC-NYGICVNTNG-------NGNS------KVDHCLTDPC 50
P C D++EC + C N G C N NG NG S +D C C
Sbjct: 286 PQWTGQFCTEDVDECLLQPNACQNGGTCTNRNGGYGCVCVNGWSGDDCSENIDDCAYASC 345
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW----EL 106
TCI+R + CLC +G C D+ C SNPC +C G+Y +
Sbjct: 346 TPGSTCIDRVASFSCLCPEGKAGLLCHLDDA-CISNPCHKGALCDTNPLNGQYICTCPQG 404
Query: 107 PEIRDCT----------SNPCLNDCVCVD-DGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+ DCT SNPC + CV+ DG +F+C C + + G C+ + +
Sbjct: 405 YKGADCTEDVDECAMANSNPCEHAGKCVNTDG--AFHCECLKGYAGPRCEMDINE--CHS 460
Query: 156 NPCQNNATCVASPGEKQITCLCL 178
+PCQN+ATC+ G TCLC+
Sbjct: 461 DPCQNDATCLDKIG--GFTCLCM 481
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 28/195 (14%)
Query: 10 TLCESDINECETVKDVCNYGICVNTNGNGNSK-------------VDHCLTDP--CLGHG 54
+ CE +I++C K N G+CV+ N + VD CL P C G
Sbjct: 253 STCERNIDDCPNHK-CQNGGVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGG 311
Query: 55 TCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY-------KGRYWELP 107
TC NR+ Y C+C +SG++C ++ DC+ C C+D V +G+ L
Sbjct: 312 TCTNRNGGYGCVCVNGWSGDDCSENIDDCAYASCTPGSTCIDRVASFSCLCPEGKAGLLC 371
Query: 108 EIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFE-NSAACVTLNPCQNNATC 164
+ D C SNPC +C + N + C C + + G C + + A NPC++ C
Sbjct: 372 HLDDACISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKC 431
Query: 165 VASPGEKQITCLCLK 179
V + G C CLK
Sbjct: 432 VNTDGA--FHCECLK 444
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 4 KPISLSTLCESDINEC--------ETVKDVCNYGICVNTNG----NGNSKVDHCLTDPCL 51
P + C++D+NEC T D N C G + + +D C C
Sbjct: 936 HPGFIGDKCQTDMNECLSEPCKNGGTCSDYVNSYTCTCPAGFHGVHCENNIDECTESSCF 995
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKG 101
GTC++ + + CLC ++G C D +CSSNPCLN G CVD + Y G
Sbjct: 996 NGGTCVDGINSFSCLCPVGFTGPFCLHDINECSSNPCLNAGTCVDGLGTYRCICPLGYTG 1055
Query: 102 RYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+ + + C+ +PC N CV + +C C + G YC N
Sbjct: 1056 KNCQT-LVNLCSRSPCKNKGTCVQE-KARPHCLCPPGWDGAYCDVLN 1100
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 64/148 (43%), Gaps = 25/148 (16%)
Query: 22 VKDVCNY-GICVNTNGNGN-------------SKVDHCLTDPCLGHGTCINRSDRYQCLC 67
V+ +C + GIC+N + ++D C ++PC TC + Y+C C
Sbjct: 1114 VEHLCQHSGICINAGNTHHCQCPLGYTGSYCEEQLDECASNPCQHGATCNDFIGGYRCEC 1173
Query: 68 TPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIR---------DCTSNP-C 117
P Y G NCE + +C + PC N G C+D V + P R +C P C
Sbjct: 1174 VPGYQGVNCEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDECAGGPHC 1233
Query: 118 LNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
LN CVD + C C F GE C+
Sbjct: 1234 LNGGQCVDRIG-GYTCRCLPGFAGERCE 1260
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 82/220 (37%), Gaps = 55/220 (25%)
Query: 12 CESDINECE--------TVKDVCNYGICVNTNGNGN----SKVDHCLTDP-CLGHGTCIN 58
CE +++EC+ T D+ N+ C G +D C P CL G C++
Sbjct: 1182 CEYEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDECAGGPHCLNGGQCVD 1241
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGV--CVD----------EVYKGRYWEL 106
R Y C C P ++G CE D +C SNPC ++G CV + GR+ E
Sbjct: 1242 RIGGYTCRCLPGFAGERCEGDINECLSNPCSSEGSLDCVQLKNNYNCICRSAFTGRHCET 1301
Query: 107 PEIRDCTSNPCLNDCVCVDDGNL--SFYCNCTEDFTGEYCQ----------------FEN 148
+ C PCLN C N+ F C C F+G Q ++
Sbjct: 1302 -FLDVCPQKPCLNGGTCAVASNMPDGFICRCPPGFSGARLQSSCGQVKCRRGEQCIHTDS 1360
Query: 149 SAACVTLNP-----------CQNNATCVASPGEKQITCLC 177
C LNP CQ+ TC +C C
Sbjct: 1361 GPRCFCLNPKDCESGCASNPCQHGGTCYPQRQPPHYSCRC 1400
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 42/166 (25%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTD-----------PCLGHGTCINRS 60
CE+DINEC+ + G C+N G+ + T PC+ GTC
Sbjct: 179 CEADINECDIPGRCQHGGTCLNLPGSYRCQCGQGFTGQHCDSPYVRGLPCVNGGTCRQTG 238
Query: 61 D-RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLN 119
D +C C P + G+ CE++ DC ++ C N GVCVD V
Sbjct: 239 DFTLECNCLPGFEGSTCERNIDDCPNHKCQNGGVCVDGVN-------------------- 278
Query: 120 DCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
++ C C +TG++C + + N CQN TC
Sbjct: 279 ----------TYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCT 314
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCS-SNPCLNDGVCVD---- 96
D CL+ PC TC + + ++ C C +G CE D +C C + G C++
Sbjct: 145 TDACLSHPCENGSTCTSVASQFSCKCPAGLTGQKCEADINECDIPGRCQHGGTCLNLPGS 204
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ + G++ + P +R PC+N C G+ + CNC F G C+ N
Sbjct: 205 YRCQCGQGFTGQHCDSPYVRGL---PCVNGGTCRQTGDFTLECNCLPGFEGSTCE-RNID 260
Query: 151 ACVTLNPCQNNATCV 165
C + CQN CV
Sbjct: 261 DCPN-HKCQNGGVCV 274
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 87 PCLNDGVCVD--------EVYKGRYWELPEIRD-CTSNPCLNDCVCVDDGNLS-FYCNCT 136
PC+N+G CV +G E + RD C N C N CV G L C C
Sbjct: 34 PCVNEGTCVTYHNGTGFCRCPEGFLGEYCQHRDPCEKNRCQNGGTCVPQGMLGKATCRCA 93
Query: 137 EDFTGEYCQFENSAACVTLNPCQNNATC 164
FTGE CQ+ S C PCQN TC
Sbjct: 94 PGFTGEDCQYSTSHPCFVSRPCQNGGTC 121
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 15/106 (14%)
Query: 5 PISLSTLCESDINECETVKDVCNYGICVNTNGNGNSK-------------VDHCLTDPCL 51
P + LCE +I+EC N G CV+ G + ++ CL++PC
Sbjct: 1213 PGTRGLLCEENIDECAGGPHCLNGGQCVDRIGGYTCRCLPGFAGERCEGDINECLSNPCS 1272
Query: 52 GHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV 95
G+ C+ + Y C+C ++G +CE C PCLN G C
Sbjct: 1273 SEGSLDCVQLKNNYNCICRSAFTGRHCETFLDVCPQKPCLNGGTCA 1318
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 20/144 (13%)
Query: 48 DPCLGHGTCINRSDRYQ-CLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY--- 103
+PC+ GTC+ + C C + G C+ + C N C N G CV + G+
Sbjct: 33 EPCVNEGTCVTYHNGTGFCRCPEGFLGEYCQHRD-PCEKNRCQNGGTCVPQGMLGKATCR 91
Query: 104 ----WELPEIRDCTSNPCLNDCVCVDDGNL------SFYCNCTEDFTGEYCQFENSAACV 153
+ + + TS+PC C + G ++ C C FTG+ CQ+ + AC+
Sbjct: 92 CAPGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSRDTYECTCQVGFTGKQCQWTD--ACL 149
Query: 154 TLNPCQNNATCVASPGEKQITCLC 177
+ +PC+N +TC + Q +C C
Sbjct: 150 S-HPCENGSTCTSV--ASQFSCKC 170
>sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and pentraxin
domain-containing protein 1 OS=Homo sapiens GN=SVEP1 PE=1
SV=3
Length = 3571
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 27/184 (14%)
Query: 5 PISLSTL-CESDINECETV--------KDVCNYGICVNTNGNGNSK----VDHCLTDPCL 51
P+ + L CE+DI+EC + KD+ IC +G + ++ C + PCL
Sbjct: 1220 PLGYTGLKCETDIDECSPLPCLNNGVCKDLVGEFICECPSGYTGQRCEENINECSSSPCL 1279
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPE--- 108
G C++ Y+C C + G +CE + +C SNPCLN+ VC D+V G + P
Sbjct: 1280 NKGICVDGVAGYRCTCVKGFVGLHCETEVNECQSNPCLNNAVCEDQV-GGFLCKCPPGFL 1338
Query: 109 -------IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNN 161
+ +C S PC N C D N SF C C FTG +C+ N C + NPC+N
Sbjct: 1339 GTRCGKNVDECLSQPCKNGATCKDGAN-SFRCLCAAGFTGSHCEL-NINECQS-NPCRNQ 1395
Query: 162 ATCV 165
ATCV
Sbjct: 1396 ATCV 1399
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+D C PCL +G C + + C C Y+G CE++ +CSS+PCLN G+CVD V
Sbjct: 1232 IDECSPLPCLNNGVCKDLVGEFICECPSGYTGQRCEENINECSSSPCLNKGICVDGVAGY 1291
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
+ G + E E+ +C SNPCLN+ VC D F C C F G C +N
Sbjct: 1292 RCTCVKGFVGLHCET-EVNECQSNPCLNNAVCEDQVG-GFLCKCPPGFLGTRCG-KNVDE 1348
Query: 152 CVTLNPCQNNATCVASPGEKQITCLC 177
C++ PC+N ATC G CLC
Sbjct: 1349 CLS-QPCKNGATC--KDGANSFRCLC 1371
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 39 NSKVDH-CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE 97
+S+V H C +PC GTC Y CLC Y+G CE D +CS PCLN+GVC D
Sbjct: 1190 SSQVFHECFFNPCHNSGTCQQLGRGYVCLCPLGYTGLKCETDIDECSPLPCLNNGVCKDL 1249
Query: 98 V----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
V Y G+ E I +C+S+PCLN +CV DG + C C + F G +C+ E
Sbjct: 1250 VGEFICECPSGYTGQRCE-ENINECSSSPCLNKGICV-DGVAGYRCTCVKGFVGLHCETE 1307
Query: 148 NSAACVTLNPCQNNATC 164
+ C + NPC NNA C
Sbjct: 1308 VN-ECQS-NPCLNNAVC 1322
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
CE +INEC + N GICV+ ++V+ C ++PCL + C +
Sbjct: 1266 CEENINECSS-SPCLNKGICVDGVAGYRCTCVKGFVGLHCETEVNECQSNPCLNNAVCED 1324
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+ + C C P + G C K+ +C S PC N C D + G + EL
Sbjct: 1325 QVGGFLCKCPPGFLGTRCGKNVDECLSQPCKNGATCKDGANSFRCLCAAGFTGSHCEL-N 1383
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
I +C SNPC N CVD+ N S+ C C F+G+ C+ E S
Sbjct: 1384 INECQSNPCRNQATCVDELN-SYSCKCQPGFSGKRCETEQSTG 1425
Score = 38.5 bits (88), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Query: 5 PISLSTLCESDINEC--------ETVKDVCNYGICVNTNGNGNSK----VDHCLTDPCLG 52
P L T C +++EC T KD N C+ G S ++ C ++PC
Sbjct: 1335 PGFLGTRCGKNVDECLSQPCKNGATCKDGANSFRCLCAAGFTGSHCELNINECQSNPCRN 1394
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDN 80
TC++ + Y C C P +SG CE +
Sbjct: 1395 QATCVDELNSYSCKCQPGFSGKRCETEQ 1422
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Query: 49 PCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV 95
PCL G C+ YQC C P ++G+ C C S PCLN G CV
Sbjct: 3507 PCLNGGRCVAP---YQCDCPPGWTGSRCH--TAVCQS-PCLNGGKCV 3547
>sp|Q80YA8|CRUM2_MOUSE Protein crumbs homolog 2 OS=Mus musculus GN=Crb2 PE=2 SV=3
Length = 1282
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
++VD C + PCL G+C++ Y+C+C P Y+G NC+ D +C S PC + GVC D V
Sbjct: 148 EAEVDECSSAPCLHGGSCLDGVGSYRCVCAPGYAGANCQLDVDECQSQPCAHGGVCHDLV 207
Query: 99 -----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
Y+G E E+ +C S PC ++ C+ DG SF C C F+GE C+ +
Sbjct: 208 NGFRCDCADTGYEGARCEQ-EVLECASAPCAHNASCL-DGFRSFRCLCWPGFSGERCEVD 265
Query: 148 NSAACVTLNPCQNNATCV 165
C + PCQN C+
Sbjct: 266 ED-ECAS-GPCQNGGQCL 281
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 40 SKVDHCLTDPCLGHGTCINRS---DRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD 96
S++ C T PC C+ + + ++C C P + G +CE D +C+S PC + G C +
Sbjct: 70 SELGGCATQPCHHGALCVPQGPDPNSFRCYCVPGFQGPHCELDIDECASRPCQHGGTCQN 129
Query: 97 EV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y G E E+ +C+S PCL+ C+ DG S+ C C + G CQ
Sbjct: 130 LADHYECHCPLGYAGVTCEA-EVDECSSAPCLHGGSCL-DGVGSYRCVCAPGYAGANCQL 187
Query: 147 E 147
+
Sbjct: 188 D 188
Score = 53.1 bits (126), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
VD C + PCL G+C + + +QC C Y+G C++D +C S PCL+ G C D V G
Sbjct: 325 VDECASGPCLNGGSCQDLPNGFQCYCQDGYTGLTCQEDMDECQSEPCLHGGTCSDTV-AG 383
Query: 102 RYWELPE----------IRDCTSNPCLNDCVCV---DDGNLSFYCNCTEDFTGEYC 144
+ PE + C + C C+ G ++C C G +C
Sbjct: 384 YICQCPEAWGGHDCSVQLTGCQGHTCPLAATCIPTFKSGLHGYFCRCPPGTYGPFC 439
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 64/161 (39%), Gaps = 45/161 (27%)
Query: 43 DHCLTDPCLGHGTCINRSDR---------------------YQCLCTPRYSGNNCEKDNG 81
D C + PC G C+ RSD + C C ++GN+C D
Sbjct: 267 DECASGPCQNGGQCLQRSDPTLYGGVQAIFPGAFSFSHAAGFLCSCPLGFAGNDCSMDVD 326
Query: 82 DCSSNPCLNDGVCVD----------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSF 131
+C+S PCLN G C D + Y G + ++ +C S PCL+ C D +
Sbjct: 327 ECASGPCLNGGSCQDLPNGFQCYCQDGYTGLTCQ-EDMDECQSEPCLHGGTCSDT-VAGY 384
Query: 132 YCNCTEDFTGEYCQFENSAACVTLNPCQNN-----ATCVAS 167
C C E + G C V L CQ + ATC+ +
Sbjct: 385 ICQCPEAWGGHDCS-------VQLTGCQGHTCPLAATCIPT 418
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 41 KVDHCLTDPCLGHGTCINRSD-RYQCLCTPRYSGNNCE--------------KDNGDCSS 85
+ D C + PC+ G C R D R++C C P +SG C KD C
Sbjct: 1091 RADPCRSTPCV-RGQCHARPDGRFECRCPPGFSGPRCRLPVLPQGCNLNSTCKDGAPCEG 1149
Query: 86 NPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
P + C + + R L + C ++PCLN C + F C C+ F+G++C+
Sbjct: 1150 GPLGTNCSCQEGLAGLRCQSL--DKPCEASPCLNGGTCRVASGI-FECTCSAGFSGQFCE 1206
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 54/143 (37%), Gaps = 15/143 (10%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV------ 98
C PCL G C + D + C C P + G CE C S PC+ G C
Sbjct: 1057 CSPSPCLHGGACRDLFDAFACSCGPAWEGPRCEIRADPCRSTPCVR-GQCHARPDGRFEC 1115
Query: 99 -----YKGRYWELPEI-RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
+ G LP + + C N D + G L C+C E G CQ +
Sbjct: 1116 RCPPGFSGPRCRLPVLPQGCNLNSTCKDGAPCEGGPLGTNCSCQEGLAGLRCQSLDKP-- 1173
Query: 153 VTLNPCQNNATCVASPGEKQITC 175
+PC N TC + G + TC
Sbjct: 1174 CEASPCLNGGTCRVASGIFECTC 1196
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 83 CSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNL--SFYCNCTEDFT 140
C+S+PC C G E E+ C + PC + +CV G SF C C F
Sbjct: 46 CASDPCAPGTKCQATESGGYTCEPSELGGCATQPCHHGALCVPQGPDPNSFRCYCVPGFQ 105
Query: 141 GEYCQFENSAACVTLNPCQNNATC 164
G +C+ + C + PCQ+ TC
Sbjct: 106 GPHCELDID-ECAS-RPCQHGGTC 127
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
Query: 112 CTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASP 168
C NPC N C N FYC C+E+FTG C + PC ATC P
Sbjct: 814 CNPNPCFNGGTCHVTWN-DFYCTCSENFTGPTCAQQR---WCPRQPCLPPATCEEVP 866
>sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog OS=Xenopus laevis GN=notch1
PE=1 SV=3
Length = 2524
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 31/197 (15%)
Query: 5 PISLSTLCESDINECETVKDVCNYG-ICVNTNGNGN-------------SKVDHCLTDPC 50
P C +D++EC + C +G C NT G+ V+ CL++PC
Sbjct: 401 PGYTGPACNNDVDECSLGANPCEHGGRCTNTLGSFQCNCPQGYAGPRCEIDVNECLSNPC 460
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YK 100
TC+++ +QC+C P Y G CE + +C+SNPCL++G C+D++ +
Sbjct: 461 QNDSTCLDQIGEFQCICMPGYEGLYCETNIDECASNPCLHNGKCIDKINEFRCDCPTGFS 520
Query: 101 GRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQN 160
G + + +CTS PC N C+D N S+ C CTE FTG +C+ ++ C+ +PC
Sbjct: 521 GNLCQH-DFDECTSTPCKNGAKCLDGPN-SYTCQCTEGFTGRHCE-QDINECIP-DPCH- 575
Query: 161 NATCVASPGEKQITCLC 177
TC G TCLC
Sbjct: 576 YGTC--KDGIATFTCLC 590
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 97/197 (49%), Gaps = 29/197 (14%)
Query: 4 KPISLSTLCESDINECE--------TVKDVCNYGICVNTNGNGN----SKVDHCLTDPCL 51
+P LC +INEC+ T KD N CV +G + S+V+ C ++PC+
Sbjct: 666 EPGYTGKLCNININECDSNPCRNGGTCKDQINGFTCVCPDGYHDHMCLSEVNECNSNPCI 725
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY-------W 104
HG C + + Y+C C +SG+NC+ +N +C SNPC+N G C D G Y +
Sbjct: 726 -HGACHDGVNGYKCDCEAGWSGSNCDINNNECESNPCMNGGTCKD--MTGAYICTCKAGF 782
Query: 105 ELPE----IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQN 160
P I +C+SNPCLN C+DD + CNC +TG C E A +PC+N
Sbjct: 783 SGPNCQTNINECSSNPCLNHGTCIDD-VAGYKCNCMLPYTGAIC--EAVLAPCAGSPCKN 839
Query: 161 NATCVASPGEKQITCLC 177
C S + +C C
Sbjct: 840 GGRCKESEDFETFSCEC 856
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 89/194 (45%), Gaps = 28/194 (14%)
Query: 4 KPISLSTLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPC 50
+P LC++DINEC + K N G C + T N +K+D C ++ C
Sbjct: 591 RPGYTGRLCDNDINECLS-KPCLNGGQCTDRENGYICTCPKGTTGVNCETKIDDCASNLC 649
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK---------G 101
+G CI++ D Y+C C P Y+G C + +C SNPC N G C D++
Sbjct: 650 -DNGKCIDKIDGYECTCEPGYTGKLCNININECDSNPCRNGGTCKDQINGFTCVCPDGYH 708
Query: 102 RYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNN 161
+ L E+ +C SNPC++ DG + C+C ++G C N+ NPC N
Sbjct: 709 DHMCLSEVNECNSNPCIHG--ACHDGVNGYKCDCEAGWSGSNCDINNNE--CESNPCMNG 764
Query: 162 ATCVASPGEKQITC 175
TC G TC
Sbjct: 765 GTCKDMTGAYICTC 778
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 25/187 (13%)
Query: 11 LCESDINECET---VKDVCNYGI----CVNTNGNGNSKVD----HCLTDPCLGHGTCINR 59
+C S++NEC + + C+ G+ C G S D C ++PC+ GTC +
Sbjct: 711 MCLSEVNECNSNPCIHGACHDGVNGYKCDCEAGWSGSNCDINNNECESNPCMNGGTCKDM 770
Query: 60 SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPEI 109
+ Y C C +SG NC+ + +CSSNPCLN G C+D+V Y G E +
Sbjct: 771 TGAYICTCKAGFSGPNCQTNINECSSNPCLNHGTCIDDVAGYKCNCMLPYTGAICEA-VL 829
Query: 110 RDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASP 168
C +PC N C + + +F C C + G+ C+ + + CV PC+N ATC +
Sbjct: 830 APCAGSPCKNGGRCKESEDFETFSCECPPGWQGQTCEIDMN-ECVN-RPCRNGATCQNTN 887
Query: 169 GEKQITC 175
G + C
Sbjct: 888 GSYKCNC 894
Score = 70.5 bits (171), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C+ PC TC N + Y+C C P Y+G NCE D DC NPC N G C D +
Sbjct: 869 MNECVNRPCRNGATCQNTNGSYKCNCKPGYTGRNCEMDIDDCQPNPCHNGGSCSDGINMF 928
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
++G E +I +C SNPC N C D N S+ C C F+G +C+ N+
Sbjct: 929 FCNCPAGFRGPKCE-EDINECASNPCKNGANCTDCVN-SYTCTCQPGFSGIHCE-SNTPD 985
Query: 152 CVTLNPCQNNATCVASPGEKQITCLC 177
C T + C N TC+ G TC C
Sbjct: 986 C-TESSCFNGGTCID--GINTFTCQC 1008
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 15/159 (9%)
Query: 19 CETVKDVCNYGICVNTNGNGNS--KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNC 76
CE + V Y G+S + D C ++PC G C+ +Y C C P + G C
Sbjct: 117 CELLNSVTEYKCRCPPGWTGDSCQQADPCASNPCANGGKCLPFEIQYICKCPPGFHGATC 176
Query: 77 EKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDD 126
++D +CS NPC N G C++E + GR + P + C +PCLN C
Sbjct: 177 KQDINECSQNPCKNGGQCINEFGSYRCTCQNRFTGRNCDEPYV-PCNPSPCLNGGTCRQT 235
Query: 127 GNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ S+ C C F+G+ C+ EN C + N C+N TCV
Sbjct: 236 DDTSYDCTCLPGFSGQNCE-ENIDDCPS-NNCRNGGTCV 272
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 5 PISLSTLCESDINECETVKDVCNYG-ICVNTNG-------------NGNSKVDHCLTDPC 50
P CE D+NEC V C G C NTNG N +D C +PC
Sbjct: 858 PGWQGQTCEIDMNEC--VNRPCRNGATCQNTNGSYKCNCKPGYTGRNCEMDIDDCQPNPC 915
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YK 100
G+C + + + C C + G CE+D +C+SNPC N C D V +
Sbjct: 916 HNGGSCSDGINMFFCNCPAGFRGPKCEEDINECASNPCKNGANCTDCVNSYTCTCQPGFS 975
Query: 101 GRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQN 160
G + E DCT + C N C+D N +F C C FTG YCQ + + PC N
Sbjct: 976 GIHCE-SNTPDCTESSCFNGGTCIDGIN-TFTCQCPPGFTGSYCQHDINE--CDSKPCLN 1031
Query: 161 NATCVASPGEKQITC 175
TC S G + TC
Sbjct: 1032 GGTCQDSYGTYKCTC 1046
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 67/155 (43%), Gaps = 24/155 (15%)
Query: 12 CESDINECET--VKDVCNYGICVNT----------NGNGNSKVDHCLTDPCLGHGTCINR 59
CE DINEC + K+ N CVN+ + S C C GTCI+
Sbjct: 941 CEEDINECASNPCKNGANCTDCVNSYTCTCQPGFSGIHCESNTPDCTESSCFNGGTCIDG 1000
Query: 60 SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPE----------I 109
+ + C C P ++G+ C+ D +C S PCLN G C D Y P+ +
Sbjct: 1001 INTFTCQCPPGFTGSYCQHDINECDSKPCLNGGTCQDS-YGTYKCTCPQGYTGLNCQNLV 1059
Query: 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
R C S+PC N C N + C C +TG YC
Sbjct: 1060 RWCDSSPCKNGGKCWQTNNF-YRCECKSGWTGVYC 1093
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
++ C+ DPC +GTC + + CLC P Y+G C+ D +C S PCLN G C D G
Sbjct: 566 INECIPDPCH-YGTCKDGIATFTCLCRPGYTGRLCDNDINECLSKPCLNGGQCTDR-ENG 623
Query: 102 RYWELP----------EIRDCTSNPCLN-DCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
P +I DC SN C N C+ DG + C C +TG+ C N
Sbjct: 624 YICTCPKGTTGVNCETKIDDCASNLCDNGKCIDKIDG---YECTCEPGYTGKLCNI-NIN 679
Query: 151 ACVTLNPCQNNATC 164
C + NPC+N TC
Sbjct: 680 ECDS-NPCRNGGTC 692
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 66/173 (38%), Gaps = 34/173 (19%)
Query: 5 PISLSTLCESDINEC--------------ETVKDV---CNYGICVNTNGNGNSKVDHCLT 47
P + CE D+NEC + V D C G T S VD C
Sbjct: 1256 PGFVGERCEGDVNECLSNPCDSRGTQNCIQLVNDYRCECRQGF---TGRRCESVVDGCKG 1312
Query: 48 DPCLGHGTCI---NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD-------- 96
PC GTC N + C C P + G CE D+ CS+ C N G C+
Sbjct: 1313 MPCRNGGTCAVASNTERGFICKCPPGFDGATCEYDSRTCSNLRCQNGGTCISVLTSSKCV 1372
Query: 97 --EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFY-CNCTEDFTGEYCQF 146
E Y G + P I C S+PC N C F+ C C ++F G +C
Sbjct: 1373 CSEGYTGATCQYPVISPCASHPCYNGGTCQFFAEEPFFQCFCPKNFNGLFCHI 1425
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 45 CLTDPCLGHGTC--INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK-- 100
C+ +PC GTC +N Y+C C P ++G++C++ + C+SNPC N G C+ +
Sbjct: 106 CVNNPCRNGGTCELLNSVTEYKCRCPPGWTGDSCQQAD-PCASNPCANGGKCLPFEIQYI 164
Query: 101 -----GRYWEL--PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACV 153
G + +I +C+ NPC N C+++ S+ C C FTG C E C
Sbjct: 165 CKCPPGFHGATCKQDINECSQNPCKNGGQCINEFG-SYRCTCQNRFTGRNCD-EPYVPC- 221
Query: 154 TLNPCQNNATC 164
+PC N TC
Sbjct: 222 NPSPCLNGGTC 232
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 42 VDHCLTDPCLGHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC--VDE 97
V+ CL++PC GT CI + Y+C C ++G CE C PC N G C
Sbjct: 1267 VNECLSNPCDSRGTQNCIQLVNDYRCECRQGFTGRRCESVVDGCKGMPCRNGGTCAVASN 1326
Query: 98 VYKGRYWELP----------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+G + P + R C++ C N C+ S C C+E +TG CQ+
Sbjct: 1327 TERGFICKCPPGFDGATCEYDSRTCSNLRCQNGGTCISV-LTSSKCVCSEGYTGATCQYP 1385
Query: 148 NSAACVTLNPCQNNATCVASPGEKQITCLCLK 179
+ C + +PC N TC E C C K
Sbjct: 1386 VISPCAS-HPCYNGGTCQFFAEEPFFQCFCPK 1416
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCS--SNPCLNDGVCVDEVY 99
+D C ++ C GTC++ + Y C C P ++G C +D +C N C N G C + Y
Sbjct: 257 IDDCPSNNCRNGGTCVDGVNTYNCQCPPDWTGQYCTEDVDECQLMPNACQNGGTCHN-TY 315
Query: 100 KG------RYWELPE----IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
G W + I DC + C + C D SFYC C TG C +N
Sbjct: 316 GGYNCVCVNGWTGEDCSENIDDCANAACHSGATC-HDRVASFYCECPHGRTGLLCHLDN- 373
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
AC++ NPC + C +P + C C
Sbjct: 374 -ACIS-NPCNEGSNCDTNPVNGKAICTC 399
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD-------EVYKGR 102
C G C++ + + C C Y+G+ CE+ +CS NPC N C D E G
Sbjct: 1115 CRNSGMCVDTGNTHFCRCQAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGY 1174
Query: 103 YWE--LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACV------T 154
+ EI +C S+PC N C+D N ++ C+C G +C+ N C T
Sbjct: 1175 HGVNCSEEINECLSHPCQNGGTCIDLIN-TYKCSCPRGTQGVHCEI-NVDDCTPFYDSFT 1232
Query: 155 LNP-CQNNATCVASPG 169
L P C NN C+ G
Sbjct: 1233 LEPKCFNNGKCIDRVG 1248
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
+VD C +PC TC + Y C C Y G NC ++ +C S+PC N G C+D +
Sbjct: 1144 QVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCIDLINT 1203
Query: 99 YK--------GRYWELPEIRDCT--------SNPCLNDCVCVDDGNLSFYCNCTEDFTGE 142
YK G + E+ + DCT C N+ C+D + C C F GE
Sbjct: 1204 YKCSCPRGTQGVHCEI-NVDDCTPFYDSFTLEPKCFNNGKCIDRVG-GYNCICPPGFVGE 1261
Query: 143 YCQFENSAACVTLNPCQNNAT 163
C+ + + C++ NPC + T
Sbjct: 1262 RCEGDVN-ECLS-NPCDSRGT 1280
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 13/146 (8%)
Query: 42 VDHCLTDP--CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
VD C P C GTC N Y C+C ++G +C ++ DC++ C + C D V
Sbjct: 295 VDECQLMPNACQNGGTCHNTYGGYNCVCVNGWTGEDCSENIDDCANAACHSGATCHDRV- 353
Query: 100 KGRYWELPEIRD---------CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFENS 149
Y E P R C SNPC C + N C C +TG C +
Sbjct: 354 ASFYCECPHGRTGLLCHLDNACISNPCNEGSNCDTNPVNGKAICTCPPGYTGPACNNDVD 413
Query: 150 AACVTLNPCQNNATCVASPGEKQITC 175
+ NPC++ C + G Q C
Sbjct: 414 ECSLGANPCEHGGRCTNTLGSFQCNC 439
Score = 37.0 bits (84), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 23/145 (15%)
Query: 50 CLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWEL-- 106
CL G C + CLC Y G C+ N N C+N G C + V +G +
Sbjct: 29 CLNGGRCEMTPGGTGVCLCGNLYFGERCQFPNPCTIKNQCMNFGTC-EPVLQGNAIDFIC 87
Query: 107 -------------PEIRDCTSNPCLNDCVCVDDGNLSFY-CNCTEDFTGEYCQFENSAAC 152
P C +NPC N C +++ Y C C +TG+ CQ + A
Sbjct: 88 HCPVGFTDKVCLTPVDNACVNNPCRNGGTCELLNSVTEYKCRCPPGWTGDSCQQADPCAS 147
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
NPC N C+ P E Q C C
Sbjct: 148 ---NPCANGGKCL--PFEIQYICKC 167
>sp|Q8VHS2|CRUM1_MOUSE Protein crumbs homolog 1 OS=Mus musculus GN=Crb1 PE=1 SV=3
Length = 1405
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 87/185 (47%), Gaps = 31/185 (16%)
Query: 5 PISLSTLCESDINECETVKDVCNYGICVNTNGNGNS--------------KVDHCLTDPC 50
P CE+D NEC + C+ G NG S +VD C++DPC
Sbjct: 137 PGYAGRFCETDHNECASSP--CHNGAMCQDGINGYSCFCVPGYQGRHCDLEVDECVSDPC 194
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YK 100
C+N RY C+C +SG NCE + +C S PCL+ C D +
Sbjct: 195 KNEAVCLNEIGRYTCVCPQEFSGVNCELEIDECRSQPCLHGATCQDAPGGYSCDCAPGFL 254
Query: 101 GRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCT-EDFTGEYCQFENSAACVTLNPCQ 159
G + EL + +C S PCL+ +CVD N S++C+CT FTG +C E+ PC
Sbjct: 255 GEHCEL-SVNECESQPCLHGGLCVDGRN-SYHCDCTGSGFTGMHC--ESLIPLCWSKPCH 310
Query: 160 NNATC 164
N+ATC
Sbjct: 311 NDATC 315
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 86/183 (46%), Gaps = 35/183 (19%)
Query: 18 ECETVKDVC------NYGICVNTNGNGN---------------SKVDHCLTDPCLGHGTC 56
+CE +KD C CV G GN + + C + C GTC
Sbjct: 65 DCEDLKDPCFSSPCQGIATCVKIPGEGNFLCQCPPGYSGLNCETATNSCGGNLCQHGGTC 124
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
+ C+C P Y+G CE D+ +C+S+PC N +C D + Y+GR+ +L
Sbjct: 125 RKDPEHPVCICPPGYAGRFCETDHNECASSPCHNGAMCQDGINGYSCFCVPGYQGRHCDL 184
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVA 166
E+ +C S+PC N+ VC+++ + C C ++F+G C+ E PC + ATC
Sbjct: 185 -EVDECVSDPCKNEAVCLNEIG-RYTCVCPQEFSGVNCELEIDEC--RSQPCLHGATCQD 240
Query: 167 SPG 169
+PG
Sbjct: 241 APG 243
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 79/180 (43%), Gaps = 27/180 (15%)
Query: 4 KPISLSTLCESDINECETVKDVCNYGICVNTN--------GNG------NSKVDHCLTDP 49
P L CE +NECE+ + + G+CV+ G+G S + C + P
Sbjct: 250 APGFLGEHCELSVNECES-QPCLHGGLCVDGRNSYHCDCTGSGFTGMHCESLIPLCWSKP 308
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEI 109
C TC + D Y C C P Y+G CE D +CSSNPC G CV+ +G Y +
Sbjct: 309 CHNDATCEDTVDSYICHCRPGYTGALCETDINECSSNPCQFWGECVELSSEGLYGNTAGL 368
Query: 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPG 169
S G + C C FTG +C+ E+ C+ L+PC N TC PG
Sbjct: 369 PSSFSYV----------GASGYVCICQPGFTGIHCE-EDVDECL-LHPCLNGGTCENLPG 416
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 18/138 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+D C + PC+ HG C + Y C C P Y+G NCE D +C S+ C N CV E
Sbjct: 1177 IDECFSSPCI-HGNCSDGVAAYHCRCEPGYTGVNCEVDVDNCKSHQCANGATCVPEAHGY 1235
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFY-----CNCTEDFTGEYCQF 146
+ GR+ + + C + G+ S + C C FTGE+C+
Sbjct: 1236 SCLCFGNFTGRFCRHSRLPSTVCGNEKRNFTCYNGGSCSMFQEDWQCMCWPGFTGEWCE- 1294
Query: 147 ENSAACVTLNPCQNNATC 164
E+ C + +PC N C
Sbjct: 1295 EDINECAS-DPCINGGLC 1311
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 12/129 (9%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLN----DGVCV----- 95
C + PCL G C + Y+C C +SG +CE + +C S+PC++ DGV
Sbjct: 1142 CHSSPCLHGGNCEDSYSSYRCACLSGWSGTHCEINIDECFSSPCIHGNCSDGVAAYHCRC 1201
Query: 96 DEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+ Y G E+ ++ +C S+ C N CV + + + C C +FTG +C+ + V
Sbjct: 1202 EPGYTGVNCEV-DVDNCKSHQCANGATCVPEAH-GYSCLCFGNFTGRFCRHSRLPSTVCG 1259
Query: 156 NPCQNNATC 164
N + N TC
Sbjct: 1260 NE-KRNFTC 1267
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK 100
C G+C + +QC+C P ++G CE+D +C+S+PC+N G+C D V +
Sbjct: 1267 CYNGGSCSMFQEDWQCMCWPGFTGEWCEEDINECASDPCINGGLCRDLVNR 1317
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 56/138 (40%), Gaps = 38/138 (27%)
Query: 4 KPISLSTLCESDINECETVK--------DVCNYGICVNTNGNGNS--------------- 40
+P LCE+DINEC + ++ + G+ NT G +S
Sbjct: 327 RPGYTGALCETDINECSSNPCQFWGECVELSSEGLYGNTAGLPSSFSYVGASGYVCICQP 386
Query: 41 ---------KVDHCLTDPCLGHGTCINRSDRYQCLC----TPR--YSGNNCEKDNGDCSS 85
VD CL PCL GTC N Y C C T R Y G NC + C+
Sbjct: 387 GFTGIHCEEDVDECLLHPCLNGGTCENLPGNYACHCPFDDTSRTFYGGENCSEILLGCTH 446
Query: 86 NPCLNDGVCVDEVYKGRY 103
+ CLN+G C+ G++
Sbjct: 447 HQCLNNGKCIPHFQNGQH 464
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 69/167 (41%), Gaps = 32/167 (19%)
Query: 10 TLCESDINECET---VKDVCNYGICVN--------TNGNGNSKVDHCLTDPCLGHGTCIN 58
T CE +I+EC + + C+ G+ T N VD+C + C TC+
Sbjct: 1171 THCEINIDECFSSPCIHGNCSDGVAAYHCRCEPGYTGVNCEVDVDNCKSHQCANGATCVP 1230
Query: 59 RSDRYQCLCTPRYSGNNCEKDN------GDCSSN-PCLNDGVCVDEVYKGRY-------- 103
+ Y CLC ++G C G+ N C N G C +++ +
Sbjct: 1231 EAHGYSCLCFGNFTGRFCRHSRLPSTVCGNEKRNFTCYNGGSC--SMFQEDWQCMCWPGF 1288
Query: 104 ---WELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
W +I +C S+PC+N +C D N F C C F GE C+ +
Sbjct: 1289 TGEWCEEDINECASDPCINGGLCRDLVN-RFLCICDVAFAGERCELD 1334
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD 82
++ C +DPC+ G C + +R+ C+C ++G CE D D
Sbjct: 1297 INECASDPCINGGLCRDLVNRFLCICDVAFAGERCELDLAD 1337
Score = 35.4 bits (80), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 21/37 (56%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79
D C + PC G CIN YQC C Y+G+NC K+
Sbjct: 673 DWCESQPCQNRGRCINLWQGYQCECDRPYTGSNCLKE 709
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 67/189 (35%), Gaps = 57/189 (30%)
Query: 44 HCLTDPCLGHGTCIN-RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD------ 96
CL+ PC + TC + D CL T +CE C S+PC CV
Sbjct: 33 RCLSGPCQNNSTCKHFPQDNNCCLDTANNLDKDCEDLKDPCFSSPCQGIATCVKIPGEGN 92
Query: 97 --------------------------------------------EVYKGRYWELPEIRDC 112
Y GR+ E + +C
Sbjct: 93 FLCQCPPGYSGLNCETATNSCGGNLCQHGGTCRKDPEHPVCICPPGYAGRFCET-DHNEC 151
Query: 113 TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQ 172
S+PC N +C DG + C C + G +C E CV+ +PC+N A C+ G +
Sbjct: 152 ASSPCHNGAMC-QDGINGYSCFCVPGYQGRHCDLE-VDECVS-DPCKNEAVCLNEIG--R 206
Query: 173 ITCLCLKEV 181
TC+C +E
Sbjct: 207 YTCVCPQEF 215
>sp|P49013|FBP3_STRPU Fibropellin-3 OS=Strongylocentrotus purpuratus GN=EGF3 PE=1 SV=1
Length = 570
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 74/137 (54%), Gaps = 14/137 (10%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
+S D C +PCL TC+++ + YQC+C P ++G+NCE D +C+S PC N G CVD+V
Sbjct: 174 SSDGDDCTPNPCLNGATCVDQVNDYQCICAPGFTGDNCETDIDECASAPCRNGGACVDQV 233
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+ G E I +C S PCLN +CVD N F C C +TG C+ +
Sbjct: 234 NGYTCNCIPGFNGVNCE-NNINECASIPCLNGGICVDGIN-QFACTCLPGYTGILCETDI 291
Query: 149 SAACVTLNPCQNNATCV 165
+ + PCQN +C
Sbjct: 292 NECASS--PCQNGGSCT 306
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 93/188 (49%), Gaps = 28/188 (14%)
Query: 12 CESDINECETVKDVCNYGICVN-TNG------------NGNSKVDHCLTDPCLGHGTCIN 58
CE+DI+EC + N G CV+ NG N + ++ C + PCL G C++
Sbjct: 211 CETDIDECASAP-CRNGGACVDQVNGYTCNCIPGFNGVNCENNINECASIPCLNGGICVD 269
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+++ C C P Y+G CE D +C+S+PC N G C D V + G E
Sbjct: 270 GINQFACTCLPGYTGILCETDINECASSPCQNGGSCTDAVNRYTCDCRAGFTGSNCET-N 328
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASP 168
I +C S+PCLN C+D G + C C ++TG +C+ + AC +L PCQN C
Sbjct: 329 INECASSPCLNGGSCLD-GVDGYVCQCLPNYTGTHCEI-SLDACASL-PCQNGGVCTNVG 385
Query: 169 GEKQITCL 176
G+ CL
Sbjct: 386 GDYVCECL 393
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 16/155 (10%)
Query: 34 TNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGV 93
T N + +D C + PC G C+++ + Y C C P ++G NCE + +C+S PCLN G+
Sbjct: 207 TGDNCETDIDECASAPCRNGGACVDQVNGYTCNCIPGFNGVNCENNINECASIPCLNGGI 266
Query: 94 CVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEY 143
CVD + Y G E +I +C S+PC N C D N + C+C FTG
Sbjct: 267 CVDGINQFACTCLPGYTGILCET-DINECASSPCQNGGSCTDAVN-RYTCDCRAGFTGSN 324
Query: 144 CQFENSAACVTLNPCQNNATCVASPGEKQITCLCL 178
C+ N C + +PC N +C+ G C CL
Sbjct: 325 CE-TNINECAS-SPCLNGGSCL--DGVDGYVCQCL 355
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 5 PISLSTLCESDINECETV--------KDVCNYGIC----VNTNGNGNSKVDHCLTDPCLG 52
P LCE+DINEC + D N C T N + ++ C + PCL
Sbjct: 280 PGYTGILCETDINECASSPCQNGGSCTDAVNRYTCDCRAGFTGSNCETNINECASSPCLN 339
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGR 102
G+C++ D Y C C P Y+G +CE C+S PC N GVC + Y G
Sbjct: 340 GGSCLDGVDGYVCQCLPNYTGTHCEISLDACASLPCQNGGVCTNVGGDYVCECLPGYTGI 399
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
E+ +I +C S PC N C+ +G + C C + + G C+
Sbjct: 400 NCEI-DINECASLPCQNGGECI-NGIAMYICQCRQGYAGVNCE 440
>sp|P82279|CRUM1_HUMAN Protein crumbs homolog 1 OS=Homo sapiens GN=CRB1 PE=1 SV=2
Length = 1406
Score = 80.9 bits (198), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 69/135 (51%), Gaps = 15/135 (11%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
+VD C +DPC TC+N RY C+C YSG NCE + +C S PCLN C D +
Sbjct: 186 EVDECASDPCKNEATCLNEIGRYTCICPHNYSGVNCELEIDECWSQPCLNGATCQDALGA 245
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCT-EDFTGEYCQFENS 149
+ G + EL +C S PCL+ +CVD N + CNCT FTG +C E
Sbjct: 246 YFCDCAPGFLGDHCEL-NTDECASQPCLHGGLCVDGEN-RYSCNCTGSGFTGTHC--ETL 301
Query: 150 AACVTLNPCQNNATC 164
PC NNATC
Sbjct: 302 MPLCWSKPCHNNATC 316
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 72/147 (48%), Gaps = 18/147 (12%)
Query: 43 DHCLTDPCLGHGTCINRSDR--YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
D C ++PC G TC+N + C C P YSG CE G C N C + G+C +
Sbjct: 72 DPCFSNPCQGSATCVNTPGERSFLCKCPPGYSGTICETTIGSCGKNSCQHGGICHQDPIY 131
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
Y GR+ E+ + +C S+PC N VC DG + C C + G +C E
Sbjct: 132 PVCICPAGYAGRFCEI-DHDECASSPCQNGAVC-QDGIDGYSCFCVPGYQGRHCDLE-VD 188
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLC 177
C + +PC+N ATC+ G + TC+C
Sbjct: 189 ECAS-DPCKNEATCLNEIG--RYTCIC 212
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 62/125 (49%), Gaps = 12/125 (9%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW 104
C + PC + TC + D Y C C P Y+G CE D +C+SNPC ++G CV+ + +Y
Sbjct: 305 CWSKPCHNNATCEDSVDNYTCHCWPGYTGAQCEIDLNECNSNPCQSNGECVELSSEKQYG 364
Query: 105 ELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATC 164
+ + S + VC+ C FTG +C+ E+ C + NPCQN TC
Sbjct: 365 RITGLPSSFSYHEASGYVCI----------CQPGFTGIHCE-EDVNECSS-NPCQNGGTC 412
Query: 165 VASPG 169
PG
Sbjct: 413 ENLPG 417
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 14/140 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
+ + C + C G C C+C Y+G CE D+ +C+S+PC N VC D +
Sbjct: 109 TTIGSCGKNSCQHGGICHQDPIYPVCICPAGYAGRFCEIDHDECASSPCQNGAVCQDGID 168
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y+GR+ +L E+ +C S+PC N+ C+++ + C C +++G C+ E
Sbjct: 169 GYSCFCVPGYQGRHCDL-EVDECASDPCKNEATCLNEIG-RYTCICPHNYSGVNCELEID 226
Query: 150 AACVTLNPCQNNATCVASPG 169
C + PC N ATC + G
Sbjct: 227 -ECWS-QPCLNGATCQDALG 244
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 18/138 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+D C ++PC+ HG C +R Y C C P Y+G NCE D +C S+ C N C+
Sbjct: 1178 IDECFSNPCI-HGNCSDRVAAYHCTCEPGYTGVNCEVDIDNCQSHQCANGATCISHTNGY 1236
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFY-----CNCTEDFTGEYCQF 146
+ G++ + + C + GN + + C C FTGE+C+
Sbjct: 1237 SCLCFGNFTGKFCRQSRLPSTVCGNEKTNLTCYNGGNCTEFQTELKCMCRPGFTGEWCE- 1295
Query: 147 ENSAACVTLNPCQNNATC 164
++ C + +PC N C
Sbjct: 1296 KDIDECAS-DPCVNGGLC 1312
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 64/126 (50%), Gaps = 13/126 (10%)
Query: 30 ICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCL 89
I N+ G +++ C ++PCL G C + Y C C +SG +CE + +C SNPC+
Sbjct: 1128 ISTNSVVTGCLQLNVCNSNPCLHGGNCEDIYSSYHCSCPLGWSGKHCELNIDECFSNPCI 1187
Query: 90 NDGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDF 139
+ G C D V Y G E+ +I +C S+ C N C+ N + C C +F
Sbjct: 1188 H-GNCSDRVAAYHCTCEPGYTGVNCEV-DIDNCQSHQCANGATCISHTN-GYSCLCFGNF 1244
Query: 140 TGEYCQ 145
TG++C+
Sbjct: 1245 TGKFCR 1250
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 38/148 (25%)
Query: 42 VDHCLTDPCLGHGTCINRSDR--------------------YQCLCTPRYSGNNCEKDNG 81
++ C ++PC +G C+ S Y C+C P ++G +CE+D
Sbjct: 340 LNECNSNPCQSNGECVELSSEKQYGRITGLPSSFSYHEASGYVCICQPGFTGIHCEEDVN 399
Query: 82 DCSSNPCLNDGVC---------------VDEVYKGRYWELPEIRDCTSNPCLNDCVCV-- 124
+CSSNPC N G C + + G + CT CLN+ C+
Sbjct: 400 ECSSNPCQNGGTCENLPGNYTCHCPFDNLSRTFYGGRDCSDILLGCTHQQCLNNGTCIPH 459
Query: 125 -DDGNLSFYCNCTEDFTGEYCQFENSAA 151
DG F C C +TG C+ + +
Sbjct: 460 FQDGQHGFSCLCPSGYTGSLCEIATTLS 487
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK 100
C G C +C+C P ++G CEKD +C+S+PC+N G+C D + K
Sbjct: 1268 CYNGGNCTEFQTELKCMCRPGFTGEWCEKDIDECASDPCVNGGLCQDLLNK 1318
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD 82
+D C +DPC+ G C + +++QCLC ++G CE D D
Sbjct: 1298 IDECASDPCVNGGLCQDLLNKFQCLCDVAFAGERCEVDLAD 1338
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 65/165 (39%), Gaps = 37/165 (22%)
Query: 18 ECETVKDVCNYGICVNTNGNGNSKVDHCLTDP------------------CLGHGTCINR 59
CE D C C++ N + HC +P C TCI+
Sbjct: 1173 HCELNIDECFSNPCIHGNCSDRVAAYHCTCEPGYTGVNCEVDIDNCQSHQCANGATCISH 1232
Query: 60 SDRYQCLCTPRYSGNNCEKDN------GDCSSN-PCLNDGVCVD----------EVYKGR 102
++ Y CLC ++G C + G+ +N C N G C + + G
Sbjct: 1233 TNGYSCLCFGNFTGKFCRQSRLPSTVCGNEKTNLTCYNGGNCTEFQTELKCMCRPGFTGE 1292
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+ E +I +C S+PC+N +C D N F C C F GE C+ +
Sbjct: 1293 WCE-KDIDECASDPCVNGGLCQDLLN-KFQCLCDVAFAGERCEVD 1335
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 14/105 (13%)
Query: 76 CEKDNGDCSSNPCLNDGVCVD----------EVYKGRYWELPEIRD-CTSNPCLNDCVCV 124
C K+N C SN C N+ C D + + ++D C SNPC CV
Sbjct: 27 CNKNNTRCLSNSCQNNSTCKDFSKDNDCSCSDTANNLDKDCDNMKDPCFSNPCQGSATCV 86
Query: 125 DD-GNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASP 168
+ G SF C C ++G C E + N CQ+ C P
Sbjct: 87 NTPGERSFLCKCPPGYSGTIC--ETTIGSCGKNSCQHGGICHQDP 129
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 20/39 (51%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79
+ D C + PC G CIN YQC C Y G NC ++
Sbjct: 672 RKDWCESQPCQSRGRCINLWLSYQCDCHRPYEGPNCLRE 710
>sp|Q61982|NOTC3_MOUSE Neurogenic locus notch homolog protein 3 OS=Mus musculus GN=Notch3
PE=1 SV=1
Length = 2318
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 36/196 (18%)
Query: 12 CESDINECETVKDVCNY-GICVNTNGNG-------------NSKVDHCLTDPCLGHGTCI 57
C+ D++EC + C + G CVNT G+ + V+ CL+ PC TC+
Sbjct: 389 CDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATCL 448
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
+R ++ C+C ++G CE D +C S+PC+N GVC D V + G +L
Sbjct: 449 DRIGQFTCICMAGFTGTYCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSMCQL- 507
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA----- 162
++ +C S PC N CVD + + C C E F G C+ N C + +PC +
Sbjct: 508 DVDECASTPCRNGAKCVDQPD-GYECRCAEGFEGTLCE-RNVDDC-SPDPCHHGRCVDGI 564
Query: 163 ---TCVASPGEKQITC 175
+C +PG I C
Sbjct: 565 ASFSCACAPGYTGIRC 580
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 31/190 (16%)
Query: 9 STLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGT 55
TLCE ++++C D C++G CV+ T S+VD C + PC G
Sbjct: 540 GTLCERNVDDCS--PDPCHHGRCVDGIASFSCACAPGYTGIRCESQVDECRSQPCRYGGK 597
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWE 105
C++ D+Y C C P +G NCE + DC+SNPC GVC D + + G
Sbjct: 598 CLDLVDKYLCRCPPGTTGVNCEVNIDDCASNPC-TFGVCRDGINRYDCVCQPGFTGPLCN 656
Query: 106 LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ EI +C S+PC CV DG F+C C C N PC ++ C
Sbjct: 657 V-EINECASSPCGEGGSCV-DGENGFHCLCPPGSLPPLCLPANHP--CAHKPC-SHGVCH 711
Query: 166 ASPGEKQITC 175
+PG + C
Sbjct: 712 DAPGGFRCVC 721
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 86/229 (37%), Gaps = 67/229 (29%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
C+SDI+EC + + G C+NT G+ + V C PC GTC
Sbjct: 156 CQSDIDECRSGTTCRHGGTCLNTPGSFRCQCPLGYTGLLCENPVVPCAPSPCRNGGTCRQ 215
Query: 59 RSD-RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRY---- 103
SD Y C C P + G NCE + DC + CLN G CVD V + G++
Sbjct: 216 SSDVTYDCACLPGFEGQNCEVNVDDCPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTED 275
Query: 104 -------------------------------WELPE----IRDCTSNPCLNDCVCVDDGN 128
W I DC + C + C D
Sbjct: 276 VDECQLQPNACHNGGTCFNLLGGHSCVCVNGWTGESCSQNIDDCATAVCFHGATC-HDRV 334
Query: 129 LSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
SFYC C TG C ++ ACV+ NPC +A C +P + C C
Sbjct: 335 ASFYCACPMGKTGLLCHLDD--ACVS-NPCHEDAICDTNPVSGRAICTC 380
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 50/154 (32%)
Query: 42 VDHCL-TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
VD C PC HGTC N ++C+C Y+G C++D DC NPCL+ G C D V
Sbjct: 812 VDECAGASPCGPHGTCTNLPGNFRCICHRGYTGPFCDQDIDDCDPNPCLHGGSCQDGVGS 871
Query: 99 ---------------------------------------------YKGRYWELPEIRDCT 113
Y G + E+ ++ DC+
Sbjct: 872 FSCSCLDGFAGPRCARDVDECLSSPCGPGTCTDHVASFTCACPPGYGGFHCEI-DLPDCS 930
Query: 114 SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+ C N CV DG SF C C +TG +CQ+E
Sbjct: 931 PSSCFNGGTCV-DGVSSFSCLCRPGYTGTHCQYE 963
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 9 STLCESDINECETV--------KDVCNYGICVNTNGNGNSK----VDHCLTDPCLGHGTC 56
T CE DI+EC++ KD N C +G S VD C + PC C
Sbjct: 464 GTYCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSMCQLDVDECASTPCRNGAKC 523
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
+++ D Y+C C + G CE++ DCS +PC + G CVD + Y G E
Sbjct: 524 VDQPDGYECRCAEGFEGTLCERNVDDCSPDPC-HHGRCVDGIASFSCACAPGYTGIRCES 582
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
++ +C S PC C+D + + C C TG C+
Sbjct: 583 -QVDECRSQPCRYGGKCLDLVD-KYLCRCPPGTTGVNCEV 620
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 6 ISLSTLCESD---INECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDR 62
+ L LC+ I++ + VC G T + +VD C PC GTC
Sbjct: 1050 VRLEQLCQEGGKCIDKGRSHYCVCPEG---RTGSHCEHEVDPCTAQPCQHGGTCRGYMGG 1106
Query: 63 YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK-------GRYWELPEIR--DCT 113
Y C C Y+G++CE + +C+S PC N G C+D V + G L EI DC
Sbjct: 1107 YVCECPAGYAGDSCEDNIDECASQPCQNGGSCIDLVARYLCSCPPGTLGVLCEINEDDCD 1166
Query: 114 SNP-------CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
P CL++ CVD F CNC +TG +C+ +
Sbjct: 1167 LGPSLDSGVQCLHNGTCVDLVG-GFRCNCPPGYTGLHCEAD 1206
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 4 KPISLSTLCESDINECETVKDVC-NYGICVNTNG-------NG------NSKVDHCLTDP 49
P C D++EC+ + C N G C N G NG + +D C T
Sbjct: 264 PPEWTGQFCTEDVDECQLQPNACHNGGTCFNLLGGHSCVCVNGWTGESCSQNIDDCATAV 323
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW-ELP- 107
C TC +R + C C +G C D+ C SNPC D +C GR P
Sbjct: 324 CFHGATCHDRVASFYCACPMGKTGLLCHLDDA-CVSNPCHEDAICDTNPVSGRAICTCPP 382
Query: 108 ---------EIRDCT--SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLN 156
++ +C+ +NPC + CV+ SF C C +TG C+ + + C++
Sbjct: 383 GFTGGACDQDVDECSIGANPCEHLGRCVNTQG-SFLCQCGRGYTGPRCETDVNE-CLS-G 439
Query: 157 PCQNNATCVASPGEKQITCLCLK 179
PC+N ATC+ G Q TC+C+
Sbjct: 440 PCRNQATCLDRIG--QFTCICMA 460
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 67/160 (41%), Gaps = 29/160 (18%)
Query: 12 CESDINECETVKDVCNYGICVN-----------TNGNGNSKVD--HCLTDPCLGHGTCIN 58
C D++EC + C G C + G + ++D C C GTC++
Sbjct: 885 CARDVDEC--LSSPCGPGTCTDHVASFTCACPPGYGGFHCEIDLPDCSPSSCFNGGTCVD 942
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC----------VDEVYKGRYWELPE 108
+ CLC P Y+G +C+ + C S PCL+ G+C E + G + P
Sbjct: 943 GVSSFSCLCRPGYTGTHCQYEADPCFSRPCLHGGICNPTHPGFECTCREGFTGSQCQNP- 1001
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+ C+ PC N CV G YC C ++G C ++
Sbjct: 1002 VDWCSQAPCQNGGRCVQTGA---YCICPPGWSGRLCDIQS 1038
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 16/141 (11%)
Query: 49 PCLGHGTCINRSDRYQ--CLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG----- 101
PC G C ++ + CLC P + G C+ ++ C S PC GVC V G
Sbjct: 48 PCANGGRCTHQQPSLEAACLCLPGWVGERCQLED-PCHSGPCAGRGVCQSSVVAGTARFS 106
Query: 102 ----RYWELP---EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154
R ++ P + C S PC++ C + F C C + G+ CQ + C +
Sbjct: 107 CRCLRGFQGPDCSQPDPCVSRPCVHGAPCSVGPDGRFACACPPGYQGQSCQ-SDIDECRS 165
Query: 155 LNPCQNNATCVASPGEKQITC 175
C++ TC+ +PG + C
Sbjct: 166 GTTCRHGGTCLNTPGSFRCQC 186
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 15/138 (10%)
Query: 40 SKVDHCLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDC-SSNPCLNDGVCVDE 97
S+ D C++ PC+ C + R+ C C P Y G +C+ D +C S C + G C++
Sbjct: 119 SQPDPCVSRPCVHGAPCSVGPDGRFACACPPGYQGQSCQSDIDECRSGTTCRHGGTCLNT 178
Query: 98 V----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
Y G E P + C +PC N C ++++ C C F G+ C+
Sbjct: 179 PGSFRCQCPLGYTGLLCENPVV-PCAPSPCRNGGTCRQSSDVTYDCACLPGFEGQNCEV- 236
Query: 148 NSAACVTLNPCQNNATCV 165
N C C N TCV
Sbjct: 237 NVDDCPGHR-CLNGGTCV 253
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 71/205 (34%), Gaps = 68/205 (33%)
Query: 4 KPISLSTLCESDINECETVKDVCNYGICVNTNG---------------NGNSKVDHCLTD 48
P SL LC + C C++G+C + G + + D C +
Sbjct: 685 PPGSLPPLCLPANHPC--AHKPCSHGVCHDAPGGFRCVCEPGWSGPRCSQSLAPDACESQ 742
Query: 49 PCLGHGTCINRSDRYQCLCTPRYSGNNCE----------KDNGDCSSN------------ 86
PC GTC + ++C C P + G+ CE + G C S+
Sbjct: 743 PCQAGGTCTSDGIGFRCTCAPGFQGHQCEVLSPCTPSLCEHGGHCESDPDRLTVCSCPPG 802
Query: 87 -----------------PCLNDGVCVD----------EVYKGRYWELPEIRDCTSNPCLN 119
PC G C + Y G + + +I DC NPCL+
Sbjct: 803 WQGPRCQQDVDECAGASPCGPHGTCTNLPGNFRCICHRGYTGPFCDQ-DIDDCDPNPCLH 861
Query: 120 DCVCVDDGNLSFYCNCTEDFTGEYC 144
C DG SF C+C + F G C
Sbjct: 862 GGSC-QDGVGSFSCSCLDGFAGPRC 885
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 62/172 (36%), Gaps = 57/172 (33%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRY 71
CE+DINEC G C + CL DP GH ++C+C P +
Sbjct: 1203 CEADINECRP-------GACHAAH------TRDCLQDP-GGH---------FRCVCHPGF 1239
Query: 72 SGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSF 131
+G C+ C S PC + G C + +G G L+F
Sbjct: 1240 TGPRCQIALSPCESQPCQHGGQCRHSLGRG-------------------------GGLTF 1274
Query: 132 YCNCTEDFTGEYCQFENSAACVTLN-----PCQNNA---TCVASPGEKQITC 175
C+C F G C+ + +C L PCQ A C PG +C
Sbjct: 1275 TCHCVPPFWGLRCE-RVARSCRELQCPVGIPCQQTARGPRCACPPGLSGPSC 1325
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 43 DHCLTDPCLGHGTC----INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV--- 95
D C + PC G G C + + R+ C C + G +C + + C S PC++ C
Sbjct: 81 DPCHSGPCAGRGVCQSSVVAGTARFSCRCLRGFQGPDCSQPD-PCVSRPCVHGAPCSVGP 139
Query: 96 --------DEVYKGRYWELPEIRDCTSN-PCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y+G+ + +I +C S C + C++ SF C C +TG C
Sbjct: 140 DGRFACACPPGYQGQSCQS-DIDECRSGTTCRHGGTCLNTPG-SFRCQCPLGYTGLLC-- 195
Query: 147 ENSAACVTLNPCQNNATCVAS 167
EN +PC+N TC S
Sbjct: 196 ENPVVPCAPSPCRNGGTCRQS 216
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 50/126 (39%), Gaps = 24/126 (19%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
+ VD C PC G C+ C+C P +SG C+ + C+ GV ++++
Sbjct: 999 QNPVDWCSQAPCQNGGRCVQTG--AYCICPPGWSGRLCDIQSLPCTEA-AAQMGVRLEQL 1055
Query: 99 YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPC 158
C C+D G S YC C E TG +C+ E T PC
Sbjct: 1056 ------------------CQEGGKCIDKGR-SHYCVCPEGRTGSHCEHEVDP--CTAQPC 1094
Query: 159 QNNATC 164
Q+ TC
Sbjct: 1095 QHGGTC 1100
>sp|Q8UWJ4|DLLD_DANRE Delta-like protein D OS=Danio rerio GN=dld PE=1 SV=2
Length = 717
Score = 80.5 bits (197), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 84/192 (43%), Gaps = 31/192 (16%)
Query: 11 LCESDINECETVKDVCNYGICVNTNGNGNS---------------KVDHCLTDPCLGHGT 55
C D+N C K N C NT G G+ +V+ C PC G+
Sbjct: 282 FCNQDLNYCTHHKPCQNGATCTNT-GQGSYTCSCRPGFTGDSCEIEVNECSGSPCRNGGS 340
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP-------- 107
C + + Y C C P + G NCE C+ PC N G C D G + + P
Sbjct: 341 CTDLENTYSCTCPPGFYGRNCELSAMTCADGPCFNGGHCADNPEGGYFCQCPMGYAGFNC 400
Query: 108 --EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+I C+SNPC ND C+D + S+ C C E FTG +C+ +N C T PCQN TC
Sbjct: 401 EKKIDHCSSNPCSNDAQCLDLVD-SYLCQCPEGFTGTHCE-DNIDECATY-PCQNGGTC- 456
Query: 166 ASPGEKQITCLC 177
G TC C
Sbjct: 457 -QDGLSDYTCTC 467
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 12/117 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
K+DHC ++PC C++ D Y C C ++G +CE + +C++ PC N G C D +
Sbjct: 402 KKIDHCSSNPCSNDAQCLDLVDSYLCQCPEGFTGTHCEDNIDECATYPCQNGGTCQDGLS 461
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y G+ + C NPC N C + N + C C + G CQF
Sbjct: 462 DYTCTCPPGYTGKNC-TSAVNKCLHNPCHNGATCHEMDN-RYVCACIPGYGGRNCQF 516
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 61/173 (35%), Gaps = 56/173 (32%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCT---------------------------------- 68
D C+ P HGTC +QC C
Sbjct: 253 DDCIRYPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCQNGATCTNTGQGS 309
Query: 69 ------PRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGRYWELPEIRDC 112
P ++G++CE + +CS +PC N G C D + GR EL + C
Sbjct: 310 YTCSCRPGFTGDSCEIEVNECSGSPCRNGGSCTDLENTYSCTCPPGFYGRNCELSAMT-C 368
Query: 113 TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
PC N C D+ ++C C + G C E + NPC N+A C+
Sbjct: 369 ADGPCFNGGHCADNPEGGYFCQCPMGYAGFNC--EKKIDHCSSNPCSNDAQCL 419
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 9 STLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGT 55
T CE +I+EC T N G C + T N S V+ CL +PC T
Sbjct: 435 GTHCEDNIDECATYP-CQNGGTCQDGLSDYTCTCPPGYTGKNCTSAVNKCLHNPCHNGAT 493
Query: 56 CINRSDRYQCLCTPRYSGNNCE 77
C +RY C C P Y G NC+
Sbjct: 494 CHEMDNRYVCACIPGYGGRNCQ 515
>sp|Q9R172|NOTC3_RAT Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus
GN=Notch3 PE=2 SV=2
Length = 2319
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 92/196 (46%), Gaps = 36/196 (18%)
Query: 12 CESDINECETVKDVCNY-GICVNTNGNG-------------NSKVDHCLTDPCLGHGTCI 57
C+ D++EC + C + G CVNT G+ + V+ CL+ PC TC+
Sbjct: 390 CDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATCL 449
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
+R ++ C+C ++G CE D +C S+PC+N GVC D V + G +L
Sbjct: 450 DRIGQFTCICMAGFTGTFCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQL- 508
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA----- 162
++ +C S PC N CVD + + C C E F G C+ N C + +PC +
Sbjct: 509 DVDECASTPCRNGAKCVDQPD-GYECRCAEGFEGTLCE-RNVDDC-SPDPCHHGRCVDGI 565
Query: 163 ---TCVASPGEKQITC 175
+C +PG I C
Sbjct: 566 ASFSCACAPGYTGIRC 581
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
VD CL+ PC G GTC + + C C P Y G +CE D DCS + C N G CVD V
Sbjct: 890 VDECLSSPC-GPGTCTDHVASFTCTCPPGYGGFHCETDLLDCSPSSCFNGGTCVDGVNSF 948
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
Y G + + ++ C S PCL+ +C + + F C C E FTG CQ N
Sbjct: 949 SCLCRPGYTGTHCQY-KVDPCFSRPCLHGGIC-NPTHSGFECTCREGFTGNQCQ--NPVD 1004
Query: 152 CVTLNPCQNNATCVASPGEKQITCLCLKE 180
+ PCQN CV + C+C E
Sbjct: 1005 WCSQAPCQNGGRCV----QTGAYCICPPE 1029
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 85/190 (44%), Gaps = 31/190 (16%)
Query: 9 STLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGT 55
TLCE ++++C D C++G CV+ T S+VD C + PC G
Sbjct: 541 GTLCERNVDDCS--PDPCHHGRCVDGIASFSCACAPGYTGIRCESQVDECRSQPCRYGGK 598
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWE 105
C++ D+Y C C P +G NCE + DC+SNPC GVC D + + G
Sbjct: 599 CLDLVDKYLCRCPPGTTGVNCEVNIDDCASNPC-TFGVCRDGINRYDCVCQPGFTGPLCN 657
Query: 106 LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ EI +C S+PC CV DG F+C C C N PC ++ C
Sbjct: 658 V-EINECASSPCGEGGSCV-DGENGFHCLCPPGSLPPLCLPANHP--CAHKPC-SHGVCH 712
Query: 166 ASPGEKQITC 175
+PG Q C
Sbjct: 713 DAPGGFQCVC 722
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNG-------------NSKVDHCLTDPCLGHGTCIN 58
C+ D++EC +G C N G+ + +D C +PCL G+C +
Sbjct: 809 CQQDVDECAGASPCGPHGTCTNLPGSFRCICHGGYTGPFCDQDIDDCDPNPCLNGGSCQD 868
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+ C C ++G C +D +C S+PC G C D V Y G + E +
Sbjct: 869 GVGSFSCSCLSGFAGPRCARDVDECLSSPC-GPGTCTDHVASFTCTCPPGYGGFHCET-D 926
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+ DC+ + C N CVD N SF C C +TG +CQ++
Sbjct: 927 LLDCSPSSCFNGGTCVDGVN-SFSCLCRPGYTGTHCQYK 964
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 85/229 (37%), Gaps = 67/229 (29%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
C SDI+EC + G C+NT G+ + + + C PC GTC
Sbjct: 157 CRSDIDECRAGASCRHGGTCINTPGSFHCLCPLGYTGLLCENPIVPCAPSPCRNGGTCRQ 216
Query: 59 RSD-RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRY---- 103
SD Y C C P + G NCE + DC + CLN G CVD V + G++
Sbjct: 217 SSDVTYDCACLPGFEGQNCEVNVDDCPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTED 276
Query: 104 -------------------------------WELPE----IRDCTSNPCLNDCVCVDDGN 128
W I DC + C + C D
Sbjct: 277 VDECQLQPNACHNGGTCFNLLGGHSCVCVNGWTGESCSQNIDDCATAVCFHGATCHDR-V 335
Query: 129 LSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
SFYC C TG C ++ ACV+ NPC +A C +P + C C
Sbjct: 336 ASFYCACPMGKTGLLCHLDD--ACVS-NPCHEDAICDTNPVSGRAICTC 381
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 6 ISLSTLCESDINECETVKDVCNYGICVNTNGNGN--SKVDHCLTDPCLGHGTCINRSDRY 63
+ L LC++ +C KD +Y +C + +VD C PC GTC Y
Sbjct: 1051 VRLEQLCQAG-GQC-IDKDHSHYCVCPEGRMGSHCEQEVDPCTAQPCQHGGTCRGYMGGY 1108
Query: 64 QCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK-------GRYWELPEIR--DCTS 114
C C YSG++CE D +C+S PC N G C+D V G L EI DC
Sbjct: 1109 VCECPTGYSGDSCEDDVDECASQPCQNGGSCIDLVAHYLCSCPPGTLGVLCEINEDDCGP 1168
Query: 115 NP-------CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVAS 167
P CL++ CVD F CNC +TG +C+ + + + C+
Sbjct: 1169 GPSLDSGLRCLHNGTCVDLVG-GFRCNCPPGYTGLHCEADINECRPGTCHAAHTRDCLQD 1227
Query: 168 PGEKQITCLCLK 179
PG C+CL
Sbjct: 1228 PG-GHFRCICLP 1238
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 42 VDHCL-TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
VD C PC HGTC N ++C+C Y+G C++D DC NPCLN G C D V
Sbjct: 813 VDECAGASPCGPHGTCTNLPGSFRCICHGGYTGPFCDQDIDDCDPNPCLNGGSCQDGVGS 872
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ G ++ +C S+PC C D SF C C + G +C E
Sbjct: 873 FSCSCLSGFAGPRCAR-DVDECLSSPC-GPGTCTDH-VASFTCTCPPGYGGFHC--ETDL 927
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLC 177
+ + C N TCV G +CLC
Sbjct: 928 LDCSPSSCFNGGTCVD--GVNSFSCLC 952
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 9 STLCESDINECETV--------KDVCNYGICVNTNGNGNSK----VDHCLTDPCLGHGTC 56
T CE DI+EC++ KD N C +G S VD C + PC C
Sbjct: 465 GTFCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECASTPCRNGAKC 524
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
+++ D Y+C C + G CE++ DCS +PC + G CVD + Y G E
Sbjct: 525 VDQPDGYECRCAEGFEGTLCERNVDDCSPDPC-HHGRCVDGIASFSCACAPGYTGIRCES 583
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
++ +C S PC C+D + + C C TG C+
Sbjct: 584 -QVDECRSQPCRYGGKCLDLVD-KYLCRCPPGTTGVNCEV 621
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 88/203 (43%), Gaps = 33/203 (16%)
Query: 4 KPISLSTLCESDINECETVKDVC-NYGICVNTNG-------NG------NSKVDHCLTDP 49
P C D++EC+ + C N G C N G NG + +D C T
Sbjct: 265 PPEWTGQFCTEDVDECQLQPNACHNGGTCFNLLGGHSCVCVNGWTGESCSQNIDDCATAV 324
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW-ELP- 107
C TC +R + C C +G C D+ C SNPC D +C GR P
Sbjct: 325 CFHGATCHDRVASFYCACPMGKTGLLCHLDDA-CVSNPCHEDAICDTNPVSGRAICTCPP 383
Query: 108 ---------EIRDCT--SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLN 156
++ +C+ +NPC + CV+ SF C C +TG C+ + + C++
Sbjct: 384 GFTGGACDQDVDECSIGANPCEHLGRCVNTQG-SFLCQCGRGYTGPRCETDVNE-CLS-G 440
Query: 157 PCQNNATCVASPGEKQITCLCLK 179
PC+N ATC+ G Q TC+C+
Sbjct: 441 PCRNQATCLDRIG--QFTCICMA 461
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 57/138 (41%), Gaps = 15/138 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSD-RYQCLCTPRYSGNNCEKDNGDCSSNP-CLNDGVCVDE 97
S D C + PC C SD RY C C P Y G NC D +C + C + G C++
Sbjct: 120 SLPDPCFSSPCAHGAPCSVGSDGRYACACPPGYQGRNCRSDIDECRAGASCRHGGTCINT 179
Query: 98 V----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
Y G E P I C +PC N C ++++ C C F G+ C+
Sbjct: 180 PGSFHCLCPLGYTGLLCENP-IVPCAPSPCRNGGTCRQSSDVTYDCACLPGFEGQNCEV- 237
Query: 148 NSAACVTLNPCQNNATCV 165
N C C N TCV
Sbjct: 238 NVDDCPGHR-CLNGGTCV 254
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 18/143 (12%)
Query: 49 PCLGHGTCINR--SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG----- 101
PC G C ++ S CLC P + G C+ ++ C S PC GVC V G
Sbjct: 49 PCANGGRCTHQQPSREAACLCLPGWVGERCQLED-PCHSGPCAGRGVCQSSVVAGVARFS 107
Query: 102 ----RYWELPE---IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154
R + P+ C S+PC + C + + C C + G C+ + C
Sbjct: 108 CRCLRGFRGPDCSLPDPCFSSPCAHGAPCSVGSDGRYACACPPGYQGRNCR-SDIDECRA 166
Query: 155 LNPCQNNATCVASPGEKQITCLC 177
C++ TC+ +PG CLC
Sbjct: 167 GASCRHGGTCINTPGS--FHCLC 187
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 69/205 (33%), Gaps = 68/205 (33%)
Query: 4 KPISLSTLCESDINECETVKDVCNYGICVNTNG---------------NGNSKVDHCLTD 48
P SL LC + C C++G+C + G + + D C +
Sbjct: 686 PPGSLPPLCLPANHPC--AHKPCSHGVCHDAPGGFQCVCDPGWSGPRCSQSLAPDACESQ 743
Query: 49 PCLGHGTCINRSDRYQCLCTPRYSGNNCE----------KDNGDCSSN------------ 86
PC GTC + + C C P + G+ CE + G C S+
Sbjct: 744 PCQAGGTCTSDGIGFHCTCAPGFQGHQCEVLSPCTPSLCEHGGHCESDPDQLTVCSCPPG 803
Query: 87 -----------------PCLNDGVCVDEV----------YKGRYWELPEIRDCTSNPCLN 119
PC G C + Y G + + +I DC NPCLN
Sbjct: 804 WQGPRCQQDVDECAGASPCGPHGTCTNLPGSFRCICHGGYTGPFCDQ-DIDDCDPNPCLN 862
Query: 120 DCVCVDDGNLSFYCNCTEDFTGEYC 144
C DG SF C+C F G C
Sbjct: 863 GGSC-QDGVGSFSCSCLSGFAGPRC 886
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 61/171 (35%), Gaps = 55/171 (32%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRY 71
CE+DINEC G C + CL DP GH ++C+C P +
Sbjct: 1204 CEADINECRP-------GTCHAAH------TRDCLQDP-GGH---------FRCICLPGF 1240
Query: 72 SGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSF 131
+G C+ C S PC + G C + +G G L+F
Sbjct: 1241 TGPRCQTALFPCESQPCQHGGQCRPSLGRG-------------------------GGLTF 1275
Query: 132 YCNCTEDFTGEYCQFENSA----ACVTLNPCQNNA---TCVASPGEKQITC 175
C+C + F G C+ + C PCQ A C PG +C
Sbjct: 1276 TCHCVQPFWGLRCERVARSCRELQCPVGIPCQQTARGPRCACPPGLSGPSC 1326
Score = 37.0 bits (84), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 26/145 (17%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP----------CLN 90
VD C PC G C+ C+C P +SG C+ + C+ C
Sbjct: 1002 PVDWCSQAPCQNGGRCVQTG--AYCICPPEWSGPLCDIPSLPCTEAAAHMGVRLEQLCQA 1059
Query: 91 DGVCVDEVY-------KGRYWEL--PEIRDCTSNPCLNDCVCVDDGNLSFY-CNCTEDFT 140
G C+D+ + +GR E+ CT+ PC + C G + Y C C ++
Sbjct: 1060 GGQCIDKDHSHYCVCPEGRMGSHCEQEVDPCTAQPCQHGGTC--RGYMGGYVCECPTGYS 1117
Query: 141 GEYCQFENSAACVTLNPCQNNATCV 165
G+ C+ ++ C + PCQN +C+
Sbjct: 1118 GDSCE-DDVDECAS-QPCQNGGSCI 1140
>sp|Q90Y57|JAG1A_DANRE Protein jagged-1a OS=Danio rerio GN=jag1a PE=2 SV=1
Length = 1242
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 15/146 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C + PCL GTCI++ + YQC+C + G NCE + DC +NPC + GVC D V
Sbjct: 633 INDCESSPCLSGGTCIDKINAYQCICADGWEGPNCETNIDDCRTNPCRDRGVCRDLVNDF 692
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
+KG+ E + C + C N C D+G+ SF C C+ + G C +++
Sbjct: 693 YCECENGWKGKTCHSRESQ-CDEDTCNNGGTCSDEGD-SFKCLCSPGWEGATCNIAKNSS 750
Query: 152 CVTLNPCQNNATCVASPGEKQITCLC 177
C+ NPC+N ATCV + TC+C
Sbjct: 751 CLP-NPCENGATCVVT--GDGFTCVC 773
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 77/161 (47%), Gaps = 28/161 (17%)
Query: 11 LCESDINECETVKDVCNYGICVNT-------------NGNGNSKVDH-CLTDPCLGHGTC 56
LC+ D+N C T++ N G C NT +G + D+ CL++PCL G C
Sbjct: 293 LCDKDLNTCGTLQPCLNGGTCSNTGPDKYHCACPDGYSGQNCERADNACLSEPCLNGGLC 352
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR-----YWE----LP 107
+ S ++C C ++G +C + DCS NPC + GVCVD V + W L
Sbjct: 353 VESSLGFECQCAAGWTGPSCNINEDDCSPNPCNHSGVCVDLVDGFKCICPVQWTGKTCLI 412
Query: 108 EIRDCTSNPCLNDCVCVDDGNL--SFYCNCTEDFTGEYCQF 146
+ +C +PC+N C NL ++C C +TG+ C
Sbjct: 413 DANECEESPCVNAHSCR---NLIGGYFCECLPGWTGQNCDI 450
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 19/135 (14%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSS-NPCLNDGVCVD----- 96
D C+ P HGTCI + +QCLC + G C+KD C + PCLN G C +
Sbjct: 264 DQCIPHPGCVHGTCI---EPWQCLCDTNWGGQLCDKDLNTCGTLQPCLNGGTCSNTGPDK 320
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ Y G+ E + C S PCLN +CV+ +L F C C +TG C N
Sbjct: 321 YHCACPDGYSGQNCERAD-NACLSEPCLNGGLCVES-SLGFECQCAAGWTGPSCNI-NED 377
Query: 151 ACVTLNPCQNNATCV 165
C + NPC ++ CV
Sbjct: 378 DC-SPNPCNHSGVCV 391
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 74/178 (41%), Gaps = 25/178 (14%)
Query: 10 TLCESDINECE--------TVKDVCNYGICVNTNG----NGNSKVDHCLTDPCLGHGTCI 57
T C +IN+CE T D N C+ +G N + +D C T+PC G C
Sbjct: 627 TYCHENINDCESSPCLSGGTCIDKINAYQCICADGWEGPNCETNIDDCRTNPCRDRGVCR 686
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE----------VYKGRYWELP 107
+ + + C C + G C C + C N G C DE ++G +
Sbjct: 687 DLVNDFYCECENGWKGKTCHSRESQCDEDTCNNGGTCSDEGDSFKCLCSPGWEGATCNIA 746
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ C NPC N CV G+ F C C E + G C +NS C PC N+ TCV
Sbjct: 747 KNSSCLPNPCENGATCVVTGD-GFTCVCKEGWEGPTCS-QNSNDC-NPQPCYNSGTCV 801
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 55/127 (43%), Gaps = 18/127 (14%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
+K CL +PC TC+ D + C+C + G C +++ DC+ PC N G CVD
Sbjct: 746 AKNSSCLPNPCENGATCVVTGDGFTCVCKEGWEGPTCSQNSNDCNPQPCYNSGTCVD--- 802
Query: 100 KGRYWELPE-------------IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
G W E I +C S+PC CVD+ N + C C TG CQ
Sbjct: 803 -GDNWYRCECASGFAGPDCRININECQSSPCAFGSTCVDEIN-GYRCLCPPGRTGPRCQE 860
Query: 147 ENSAACV 153
CV
Sbjct: 861 VTGRPCV 867
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 82/205 (40%), Gaps = 55/205 (26%)
Query: 12 CESDINECETV-------KDVCNYGICVNTNGNGNSK----VDHCLTDPCLGHGTCINRS 60
C+ ++N+C KD+ N CV G + VD C + PCL G C +
Sbjct: 448 CDINVNDCHGQCLNGGLCKDLVNGYRCVCAAGFAGDRCERDVDECASRPCLNGGRCQDTL 507
Query: 61 DRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGRYWELPEIR 110
+ +QCLC P +SG C+ D C S PC N C E Y+G+ +++
Sbjct: 508 NGFQCLCPPGFSGATCQLDLDYCESGPCQNGAQCFSLASDYYCKCPEDYEGK--NCSQLK 565
Query: 111 D-CTSNPC---------------------LNDCVCVDDGN--------LSFYCNCTEDFT 140
D C PC ++ VC G F C+C + FT
Sbjct: 566 DHCLITPCQVIDSCTVAVVSNSTPGGLRLISSSVCGPHGRCRSHSHAGGHFSCDCQDGFT 625
Query: 141 GEYCQFENSAACVTLNPCQNNATCV 165
G YC EN C + +PC + TC+
Sbjct: 626 GTYCH-ENINDCES-SPCLSGGTCI 648
>sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3 OS=Homo sapiens GN=NOTCH3
PE=1 SV=2
Length = 2321
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 26/157 (16%)
Query: 12 CESDINECETVKDVCNY-GICVNTNGNG-------------NSKVDHCLTDPCLGHGTCI 57
C+ D++EC + C + G CVNT G+ + V+ CL+ PC TC+
Sbjct: 388 CDQDVDECSIGANPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGPCRNQATCL 447
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
+R ++ C+C ++G CE D +C S+PC+N GVC D V + G +L
Sbjct: 448 DRIGQFTCICMAGFTGTYCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQL- 506
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
++ +C S PC N CVD + + C C E F G C
Sbjct: 507 DVDECASTPCRNGAKCVDQPD-GYECRCAEGFEGTLC 542
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 28/188 (14%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNG-------------NSKVDHCLTDPCLGHGTCIN 58
C+ D++EC +GIC N G+ + ++ C +PCL G+C +
Sbjct: 807 CQQDVDECAGPAPCGPHGICTNLAGSFSCTCHGGYTGPSCDQDINDCDPNPCLNGGSCQD 866
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+ C C P ++G C +D +C SNPC G C D V Y G + E +
Sbjct: 867 GVGSFSCSCLPGFAGPRCARDVDECLSNPC-GPGTCTDHVASFTCTCPPGYGGFHCEQ-D 924
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASP 168
+ DC+ + C N CVD N SF C C +TG +CQ E + C++ PC + C A+
Sbjct: 925 LPDCSPSSCFNGGTCVDGVN-SFSCLCRPGYTGAHCQHE-ADPCLS-RPCLHGGVCSAAH 981
Query: 169 GEKQITCL 176
+ TCL
Sbjct: 982 PGFRCTCL 989
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 85/194 (43%), Gaps = 30/194 (15%)
Query: 6 ISLSTLCESDINECETVKDVCNYGICV--NTNGNGNSKVDHCLTDPCLGHGTCINRSDRY 63
+ L LC++ +C +D +Y +C T + +VD CL PC GTC Y
Sbjct: 1049 VRLEQLCQAG-GQC-VDEDSSHYCVCPEGRTGSHCEQEVDPCLAQPCQHGGTCRGYMGGY 1106
Query: 64 QCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK-------GRYWELPEIR--DCTS 114
C C P Y+G+NCE D +C+S PC + G C+D V + G L EI DC
Sbjct: 1107 MCECLPGYNGDNCEDDVDECASQPCQHGGSCIDLVARYLCSCPPGTLGVLCEINEDDCGP 1166
Query: 115 NP-------CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE----NSAACVTLNPCQNNAT 163
P CL++ CVD F C C +TG C+ + S AC +
Sbjct: 1167 GPPLDSGPRCLHNGTCVDLVG-GFRCTCPPGYTGLRCEADINECRSGACHAA----HTRD 1221
Query: 164 CVASPGEKQITCLC 177
C+ PG CLC
Sbjct: 1222 CLQDPG-GGFRCLC 1234
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 39 NSKVDHC-LTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE 97
S VD C + +PC GTC+N ++C C Y+G CE C+ +PC N G C
Sbjct: 156 RSDVDECRVGEPCRHGGTCLNTPGSFRCQCPAGYTGPLCENPAVPCAPSPCRNGGTCRQS 215
Query: 98 -----------VYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
++G+ E+ + DC + CLN CVD N ++ C C ++TG++C
Sbjct: 216 GDLTYDCACLPGFEGQNCEV-NVDDCPGHRCLNGGTCVDGVN-TYNCQCPPEWTGQFCTE 273
Query: 147 ENSAACVTLNPCQNNATCVASPGEKQITCL 176
+ + N C N TC + G C+
Sbjct: 274 DVDECQLQPNACHNGGTCFNTLGGHSCVCV 303
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 9 STLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGT 55
TLC+ ++++C D C++G CV+ T S+VD C + PC G
Sbjct: 539 GTLCDRNVDDCS--PDPCHHGRCVDGIASFSCACAPGYTGTRCESQVDECRSQPCRHGGK 596
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWE 105
C++ D+Y C C +G NCE + DC+SNPC GVC D + + G
Sbjct: 597 CLDLVDKYLCRCPSGTTGVNCEVNIDDCASNPC-TFGVCRDGINRYDCVCQPGFTGPLCN 655
Query: 106 LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ EI +C S+PC CV DG F C C C S C PC ++ C
Sbjct: 656 V-EINECASSPCGEGGSCV-DGENGFRCLCPPGSLPPLC-LPPSHPCAH-EPC-SHGICY 710
Query: 166 ASPGEKQITC 175
+PG + C
Sbjct: 711 DAPGGFRCVC 720
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 83/229 (36%), Gaps = 67/229 (29%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTCIN 58
C SD++EC + + G C+NT G+ + C PC GTC
Sbjct: 155 CRSDVDECRVGEPCRHGGTCLNTPGSFRCQCPAGYTGPLCENPAVPCAPSPCRNGGTCRQ 214
Query: 59 RSD-RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRY---- 103
D Y C C P + G NCE + DC + CLN G CVD V + G++
Sbjct: 215 SGDLTYDCACLPGFEGQNCEVNVDDCPGHRCLNGGTCVDGVNTYNCQCPPEWTGQFCTED 274
Query: 104 -------------------------------WELPE----IRDCTSNPCLNDCVCVDDGN 128
W I DC + C + C D
Sbjct: 275 VDECQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQNIDDCATAVCFHGATCHDR-V 333
Query: 129 LSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
SFYC C TG C ++ ACV+ NPC +A C +P + C C
Sbjct: 334 ASFYCACPMGKTGLLCHLDD--ACVS-NPCHEDAICDTNPVNGRAICTC 379
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 9 STLCESDINECETV--------KDVCNYGICVNTNGNGNSK----VDHCLTDPCLGHGTC 56
T CE DI+EC++ KD N C +G S VD C + PC C
Sbjct: 463 GTYCEVDIDECQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECASTPCRNGAKC 522
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
+++ D Y+C C + G C+++ DCS +PC + G CVD + Y G E
Sbjct: 523 VDQPDGYECRCAEGFEGTLCDRNVDDCSPDPC-HHGRCVDGIASFSCACAPGYTGTRCES 581
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
++ +C S PC + C+D + + C C TG C+
Sbjct: 582 -QVDECRSQPCRHGGKCLDLVD-KYLCRCPSGTTGVNCEV 619
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 40 SKVDHCLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCS-SNPCLNDGVCVDE 97
S D CL+ PC C + R+ C C P Y G +C D +C PC + G C++
Sbjct: 118 SLPDPCLSSPCAHGARCSVGPDGRFLCSCPPGYQGRSCRSDVDECRVGEPCRHGGTCLNT 177
Query: 98 V----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
Y G E P + C +PC N C G+L++ C C F G+ C+
Sbjct: 178 PGSFRCQCPAGYTGPLCENPAV-PCAPSPCRNGGTCRQSGDLTYDCACLPGFEGQNCEV- 235
Query: 148 NSAACVTLNPCQNNATCV 165
N C C N TCV
Sbjct: 236 NVDDCPGHR-CLNGGTCV 252
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 64/176 (36%), Gaps = 47/176 (26%)
Query: 5 PISLSTLCESDINECETVKDVCNYGICVN---------TNGNGNSKVDHCLTD----PCL 51
P C D++EC + + C G C + G G + L D C
Sbjct: 877 PGFAGPRCARDVDEC--LSNPCGPGTCTDHVASFTCTCPPGYGGFHCEQDLPDCSPSSCF 934
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRD 111
GTC++ + + CLC P Y+G +C+ + C S PCL+ GVC
Sbjct: 935 NGGTCVDGVNSFSCLCRPGYTGAHCQHEADPCLSRPCLHGGVC----------------- 977
Query: 112 CTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVAS 167
+ F C C E FTG CQ + PCQN CV +
Sbjct: 978 -------------SAAHPGFRCTCLESFTGPQCQ--TLVDWCSRQPCQNGGRCVQT 1018
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 42 VDHCLTDP--CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
VD C P C GTC N + C+C ++G +C ++ DC++ C + C D V
Sbjct: 275 VDECQLQPNACHNGGTCFNTLGGHSCVCVNGWTGESCSQNIDDCATAVCFHGATCHDRVA 334
Query: 100 K-------GRYWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFENSA 150
G+ L + D C SNPC D +C + N C C FTG C +
Sbjct: 335 SFYCACPMGKTGLLCHLDDACVSNPCHEDAICDTNPVNGRAICTCPPGFTGGACDQDVDE 394
Query: 151 ACVTLNPCQNNATCVASPG 169
+ NPC++ CV + G
Sbjct: 395 CSIGANPCEHLGRCVNTQG 413
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 15/140 (10%)
Query: 49 PCLGHGTCINRSDR-YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG------ 101
PC G C R CLC P + G C+ ++ C S PC GVC V G
Sbjct: 48 PCANGGRCTQLPSREAACLCPPGWVGERCQLED-PCHSGPCAGRGVCQSSVVAGTARFSC 106
Query: 102 ---RYWELPE---IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
R + P+ C S+PC + C + F C+C + G C+ + C
Sbjct: 107 RCPRGFRGPDCSLPDPCLSSPCAHGARCSVGPDGRFLCSCPPGYQGRSCR-SDVDECRVG 165
Query: 156 NPCQNNATCVASPGEKQITC 175
PC++ TC+ +PG + C
Sbjct: 166 EPCRHGGTCLNTPGSFRCQC 185
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 78/201 (38%), Gaps = 36/201 (17%)
Query: 4 KPISLSTLCESDINECETVKDVCNYGICVNTNG---------------NGNSKVDHCLTD 48
P SL LC + C + C++GIC + G + + D C +
Sbjct: 684 PPGSLPPLCLPPSHPC--AHEPCSHGICYDAPGGFRCVCEPGWSGPRCSQSLARDACESQ 741
Query: 49 PCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY----- 103
PC GTC + + C C P G CE + C+ NPC + G C E G+
Sbjct: 742 PCRAGGTCSSDGMGFHCTCPPGVQGRQCELLS-PCTPNPCEHGGRC--ESAPGQLPVCSC 798
Query: 104 ---WELP----EIRDCTS-NPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
W+ P ++ +C PC +C + SF C C +TG C + +
Sbjct: 799 PQGWQGPRCQQDVDECAGPAPCGPHGICTNLAG-SFSCTCHGGYTGPSCDQDIND--CDP 855
Query: 156 NPCQNNATCVASPGEKQITCL 176
NPC N +C G +CL
Sbjct: 856 NPCLNGGSCQDGVGSFSCSCL 876
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 22/153 (14%)
Query: 43 DHCLTDPCLGHGTC----INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV--- 95
D C + PC G G C + + R+ C C + G +C + C S+PC + C
Sbjct: 80 DPCHSGPCAGRGVCQSSVVAGTARFSCRCPRGFRGPDCSLPD-PCLSSPCAHGARCSVGP 138
Query: 96 --------DEVYKGRYWELPEIRDC-TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y+GR ++ +C PC + C++ SF C C +TG C
Sbjct: 139 DGRFLCSCPPGYQGRSCRS-DVDECRVGEPCRHGGTCLNTPG-SFRCQCPAGYTGPLC-- 194
Query: 147 ENSAACVTLNPCQNNATCVASPGEKQITCLCLK 179
EN A +PC+N TC S G+ C CL
Sbjct: 195 ENPAVPCAPSPCRNGGTCRQS-GDLTYDCACLP 226
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 67/200 (33%), Gaps = 40/200 (20%)
Query: 12 CESDINECETVK-DVCNYGICVNTNGNG--------------NSKVDHCLTDPCLGHGTC 56
CE+DINEC + + C+ G G + + C + PC G C
Sbjct: 1202 CEADINECRSGACHAAHTRDCLQDPGGGFRCLCHAGFSGPRCQTVLSPCESQPCQHGGQC 1261
Query: 57 INRSD-----RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEI-- 109
+ C C + G CE+ C C GV + +G P
Sbjct: 1262 RPSPGPGGGLTFTCHCAQPFWGPRCERVARSCRELQC-PVGVPCQQTPRGPRCACPPGLS 1320
Query: 110 ----------------RDCTSNPCLNDCVCVDDGNLSFY-CNCTEDFTGEYCQFENSAAC 152
C + PCL+ C F+ C C + +TG C+ +A
Sbjct: 1321 GPSCRSFPGSPPGASNASCAAAPCLHGGSCRPAPLAPFFRCACAQGWTGPRCEAPAAAPE 1380
Query: 153 VTLNPCQNNATCVASPGEKQ 172
V+ P A C A G+++
Sbjct: 1381 VSEEPRCPRAACQAKRGDQR 1400
>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a
PE=2 SV=1
Length = 2437
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 15/148 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV- 98
S+ + C ++PC+ HG+C+++ + Y+C+C + G NC+ + +C SNPC+N G C D
Sbjct: 713 SQHNECSSNPCI-HGSCLDQINSYRCVCEAGWMGRNCDININECLSNPCVNGGTCKDMTS 771
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
+ G ++ I +C SNPCLN C+DD F CNC +TGE C EN
Sbjct: 772 GYLCTCRAGFSGPNCQM-NINECASNPCLNQGSCIDD-VAGFKCNCMLPYTGEVC--ENV 827
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
A + PC+N C S + +C C
Sbjct: 828 LAPCSPRPCKNGGVCRESEDFQSFSCNC 855
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 74/151 (49%), Gaps = 19/151 (12%)
Query: 39 NSKVDHCL--TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD 96
N +D C +PC G C+N +QC C Y G CE D +C SNPC ND C+D
Sbjct: 409 NQDIDECSLGANPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKSNPCQNDATCLD 468
Query: 97 EV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
++ Y+G + ++ DC S PCLN C+D N SF+C C + F+G CQ
Sbjct: 469 QIGGFHCICMPGYEGVFCQI-NSDDCASQPCLNG-KCIDKIN-SFHCECPKGFSGSLCQV 525
Query: 147 ENSAACVTLNPCQNNATCVASPGEKQITCLC 177
+ T PC+N A C P + TC C
Sbjct: 526 DVDECAST--PCKNGAKCTDGP--NKYTCEC 552
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ CL++PC+ GTC + + Y C C +SG NC+ + +C+SNPCLN G C+D+V
Sbjct: 752 INECLSNPCVNGGTCKDMTSGYLCTCRAGFSGPNCQMNINECASNPCLNQGSCIDDVAGF 811
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSA 150
Y G E + C+ PC N VC + + SF CNC + G+ C+ + +
Sbjct: 812 KCNCMLPYTGEVCE-NVLAPCSPRPCKNGGVCRESEDFQSFSCNCPAGWQGQTCEVDIN- 869
Query: 151 ACVTLNPCQNNATCVASPGEKQITC 175
CV NPC N C G Q C
Sbjct: 870 ECVR-NPCTNGGVCENLRGGFQCRC 893
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 84/188 (44%), Gaps = 30/188 (15%)
Query: 12 CESDINECETVKDVC-NYGICVNTNGNGNSK-------------VDHCLTDPCLGHGTCI 57
CE DINEC V++ C N G+C N G + +D C +PC G C
Sbjct: 864 CEVDINEC--VRNPCTNGGVCENLRGGFQCRCNPGFTGALCENDIDDCEPNPCSNGGVCQ 921
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
+R + + C+C + G C +D +C S PC N G C D V + G E+
Sbjct: 922 DRVNGFVCVCLAGFRGERCAEDIDECVSAPCRNGGNCTDCVNSYTCSCPAGFSGINCEI- 980
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVAS 167
DCT + C N CVD G SF C C FTG YCQ + + PCQN +C
Sbjct: 981 NTPDCTESSCFNGGTCVD-GISSFSCVCLPGFTGNYCQHDVNE--CDSRPCQNGGSCQDG 1037
Query: 168 PGEKQITC 175
G + TC
Sbjct: 1038 YGTYKCTC 1045
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 26/182 (14%)
Query: 4 KPISLSTLCESDINEC--------ETVKDVCNYGICV----NTNGNGNSKVDHCLTDPCL 51
+P LCE++INEC T +D N IC T N +D C PC
Sbjct: 590 RPGYTGRLCETNINECLSQPCRNGGTCQDRENAYICTCPKGTTGVNCEINIDDCKRKPC- 648
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK------GRYWE 105
+G CI++ + Y+C+C P YSG+ C + DC+ NPC N G C+D V + +
Sbjct: 649 DYGKCIDKINGYECVCEPGYSGSMCNINIDDCALNPCHNGGTCIDGVNSFTCLCPDGFRD 708
Query: 106 ---LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA 162
L + +C+SNPC++ C+D N S+ C C + G C N C++ NPC N
Sbjct: 709 ATCLSQHNECSSNPCIHG-SCLDQIN-SYRCVCEAGWMGRNCDI-NINECLS-NPCVNGG 764
Query: 163 TC 164
TC
Sbjct: 765 TC 766
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 71/146 (48%), Gaps = 14/146 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C+ +PC G C N +QC C P ++G CE D DC NPC N GVC D V
Sbjct: 868 INECVRNPCTNGGVCENLRGGFQCRCNPGFTGALCENDIDDCEPNPCSNGGVCQDRVNGF 927
Query: 99 ----YKGRYWE--LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
G E +I +C S PC N C D N S+ C+C F+G C+ N+ C
Sbjct: 928 VCVCLAGFRGERCAEDIDECVSAPCRNGGNCTDCVN-SYTCSCPAGFSGINCEI-NTPDC 985
Query: 153 VTLNPCQNNATCVASPGEKQITCLCL 178
T + C N TCV G +C+CL
Sbjct: 986 -TESSCFNGGTCVD--GISSFSCVCL 1008
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 5 PISLSTLCESDINECE--------TVKDVCNYGICVNTNGNGNSK----VDHCLTDPCLG 52
P LCE+DI++CE +D N +CV G + +D C++ PC
Sbjct: 895 PGFTGALCENDIDDCEPNPCSNGGVCQDRVNGFVCVCLAGFRGERCAEDIDECVSAPCRN 954
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGR 102
G C + + Y C C +SG NCE + DC+ + C N G CVD + + G
Sbjct: 955 GGNCTDCVNSYTCSCPAGFSGINCEINTPDCTESSCFNGGTCVDGISSFSCVCLPGFTGN 1014
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA 162
Y + ++ +C S PC N C DG ++ C C +TG CQ + +PC+N
Sbjct: 1015 YCQH-DVNECDSRPCQNGGSC-QDGYGTYKCTCPHGYTGLNCQ--SLVRWCDSSPCKNGG 1070
Query: 163 TC 164
+C
Sbjct: 1071 SC 1072
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 49 PCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---------- 98
PC GTCIN Y C C P Y+G +C++ C +PC + G CV
Sbjct: 187 PCRNGGTCINEVGSYLCRCPPEYTGPHCQRLYQPCLPSPCRSGGTCVQTSDTTHTCSCLP 246
Query: 99 -YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNP 157
+ G+ E + DCT + C N C+D N ++ C+C + +TG+YC + ++ N
Sbjct: 247 GFTGQTCEH-NVDDCTQHACENGGPCIDGIN-TYNCHCDKHWTGQYCTEDVDECELSPNA 304
Query: 158 CQNNATCVASPGEKQITCL 176
CQN TC + G C+
Sbjct: 305 CQNGGTCHNTIGGFHCVCV 323
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 74/181 (40%), Gaps = 50/181 (27%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
VD C + PC C + ++Y C CTP +SG +CE D +C+S+PC + GVC D V
Sbjct: 527 VDECASTPCKNGAKCTDGPNKYTCECTPGFSGIHCELDINECASSPC-HYGVCRDGVASF 585
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE---- 147
Y GR E I +C S PC N C D N ++ C C + TG C+
Sbjct: 586 TCDCRPGYTGRLCET-NINECLSQPCRNGGTCQDREN-AYICTCPKGTTGVNCEINIDDC 643
Query: 148 --------------NSAACV-----------------TLNPCQNNATCVASPGEKQITCL 176
N CV LNPC N TC+ G TCL
Sbjct: 644 KRKPCDYGKCIDKINGYECVCEPGYSGSMCNINIDDCALNPCHNGGTCID--GVNSFTCL 701
Query: 177 C 177
C
Sbjct: 702 C 702
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 71/156 (45%), Gaps = 28/156 (17%)
Query: 12 CESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGTCIN 58
CE DINEC + C+YG+C + T + ++ CL+ PC GTC +
Sbjct: 561 CELDINECASSP--CHYGVCRDGVASFTCDCRPGYTGRLCETNINECLSQPCRNGGTCQD 618
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
R + Y C C +G NCE + DC PC + G C+D++ Y G +
Sbjct: 619 RENAYICTCPKGTTGVNCEINIDDCKRKPC-DYGKCIDKINGYECVCEPGYSGSMCNI-N 676
Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
I DC NPC N C+D N SF C C + F C
Sbjct: 677 IDDCALNPCHNGGTCIDGVN-SFTCLCPDGFRDATC 711
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDC--SSNPCLNDGVCVDEV- 98
D C ++PC G C Y C C P + G C +D +C S +PC N G C++EV
Sbjct: 140 ADPCASNPCANGGQCSAFESHYICTCPPNFHGQTCRQDVNECAVSPSPCRNGGTCINEVG 199
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y G + + + C +PC + CV + + C+C FTG+ C E++
Sbjct: 200 SYLCRCPPEYTGPHCQR-LYQPCLPSPCRSGGTCVQTSDTTHTCSCLPGFTGQTC--EHN 256
Query: 150 AACVTLNPCQNNATCV 165
T + C+N C+
Sbjct: 257 VDDCTQHACENGGPCI 272
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD--EVYK-- 100
C C GTC++ + C+C P ++GN C+ D +C S PC N G C D YK
Sbjct: 985 CTESSCFNGGTCVDGISSFSCVCLPGFTGNYCQHDVNECDSRPCQNGGSCQDGYGTYKCT 1044
Query: 101 --GRYWEL---PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
Y L +R C S+PC N C G SF C C +TG YC
Sbjct: 1045 CPHGYTGLNCQSLVRWCDSSPCKNGGSCWQQG-ASFTCQCASGWTGIYC 1092
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
+VD C +PC TC + Y C C P Y G NC K+ +C S PC N G C+D V
Sbjct: 1143 QVDECQPNPCQNGATCTDYLGGYSCECVPGYHGMNCSKEINECLSQPCQNGGTCIDLVNT 1202
Query: 99 YK--------GRYWEL------PEIRDCTSNP-CLNDCVCVDDGNLSFYCNCTEDFTGEY 143
YK G + E+ P + T P C N CVD + C C F GE
Sbjct: 1203 YKCSCPRGTQGVHCEIDIDDCSPSVDPLTGEPRCFNGGRCVDRVG-GYGCVCPAGFVGER 1261
Query: 144 CQ 145
C+
Sbjct: 1262 CE 1263
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 60/138 (43%), Gaps = 18/138 (13%)
Query: 42 VDHCLTDPCLGHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV---- 95
V+ CL+DPC G+ C+ + ++C C Y+G CE C PC N G C
Sbjct: 1266 VNECLSDPCDPSGSYNCVQLINDFRCECRTGYTGKRCETVFNGCKDTPCKNGGTCAVASN 1325
Query: 96 ---------DEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y G E + + C S C N CV G+LS C C F+G CQ
Sbjct: 1326 TKHGYICKCQPGYSGSSCEY-DSQSCGSLRCRNGATCVS-GHLSPRCLCAPGFSGHECQT 1383
Query: 147 ENSAACVTLNPCQNNATC 164
+ C+ +NPC N TC
Sbjct: 1384 RMDSPCL-VNPCYNGGTC 1400
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
V+ C + PC G+C + Y+C C Y+G NC+ C S+PC N G C +
Sbjct: 1020 VNECDSRPCQNGGSCQDGYGTYKCTCPHGYTGLNCQSLVRWCDSSPCKNGGSCWQQGASF 1079
Query: 99 -------YKGRYWELPEIR---------DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGE 142
+ G Y ++P + + C + CVD GN + C C +TG
Sbjct: 1080 TCQCASGWTGIYCDVPSVSCEVAARQQGVSVAVLCRHAGQCVDAGN-THLCRCQAGYTGS 1138
Query: 143 YCQFENSAACVTLNPCQNNATCV 165
YCQ E C NPCQN ATC
Sbjct: 1139 YCQ-EQVDECQP-NPCQNGATCT 1159
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 42 VDHCLTDP--CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
VD C P C GTC N + C+C ++G++C ++ DC+S C + C D V
Sbjct: 295 VDECELSPNACQNGGTCHNTIGGFHCVCVNGWTGDDCSENIDDCASAACSHGATCHDRVA 354
Query: 100 -------KGRYWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFENSA 150
GR L + D C SNPC C + + C C +TG C +
Sbjct: 355 SFFCECPHGRTGLLCHLDDACISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDE 414
Query: 151 ACVTLNPCQNNATCVASPGEKQITCL 176
+ NPC++ C+ + G Q CL
Sbjct: 415 CSLGANPCEHGGRCLNTKGSFQCKCL 440
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 40 SKVDH-CLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE 97
+ V+H C+ PC GTC + D + C C P +SG C+ + C+SNPC N G C
Sbjct: 99 TPVNHACMNSPCRNGGTCSLLTLDTFTCRCQPGWSGKTCQLAD-PCASNPCANGGQC--S 155
Query: 98 VYKGRYW-ELP----------EIRDC--TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
++ Y P ++ +C + +PC N C+++ S+ C C ++TG +C
Sbjct: 156 AFESHYICTCPPNFHGQTCRQDVNECAVSPSPCRNGGTCINEVG-SYLCRCPPEYTGPHC 214
Query: 145 QFENSAACVTLNPCQNNATCVASPGEKQITCLCL 178
Q C+ +PC++ TCV + + TC CL
Sbjct: 215 Q-RLYQPCLP-SPCRSGGTCVQT-SDTTHTCSCL 245
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 75/196 (38%), Gaps = 42/196 (21%)
Query: 5 PISLSTLCESDINECE---------------TVKDVCNYGICVNTNGNGNSKVDHCLTDP 49
P C+ D+NEC+ T K C +G T N S V C + P
Sbjct: 1009 PGFTGNYCQHDVNECDSRPCQNGGSCQDGYGTYKCTCPHGY---TGLNCQSLVRWCDSSP 1065
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCE----------KDNGDCSSNPCLNDGVCVD--- 96
C G+C + + C C ++G C+ + G + C + G CVD
Sbjct: 1066 CKNGGSCWQQGASFTCQCASGWTGIYCDVPSVSCEVAARQQGVSVAVLCRHAGQCVDAGN 1125
Query: 97 -------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y G Y + ++ +C NPC N C D + C C + G C E +
Sbjct: 1126 THLCRCQAGYTGSYCQ-EQVDECQPNPCQNGATCTDYLG-GYSCECVPGYHGMNCSKEIN 1183
Query: 150 AACVTLNPCQNNATCV 165
C++ PCQN TC+
Sbjct: 1184 -ECLS-QPCQNGGTCI 1197
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 20/132 (15%)
Query: 60 SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--------------YKGRYWE 105
S C C + G C+ N C+ +PC N GVC ++ + R
Sbjct: 40 SGEASCRCPADFVGAQCQFPN-PCNPSPCRNGGVCRPQMQGNEVGVKCDCVLGFSDRLCL 98
Query: 106 LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
P C ++PC N C +F C C ++G+ CQ + A NPC N C
Sbjct: 99 TPVNHACMNSPCRNGGTCSLLTLDTFTCRCQPGWSGKTCQLADPCAS---NPCANGGQCS 155
Query: 166 ASPGEKQITCLC 177
A E C C
Sbjct: 156 AF--ESHYICTC 165
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1
PE=1 SV=4
Length = 2555
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 26/160 (16%)
Query: 12 CESDINECETVKDVCNY-GICVNTNGNGNSK-------------VDHCLTDPCLGHGTCI 57
C D++EC + C + G C+NT G+ + V+ C+++PC TC+
Sbjct: 409 CSQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCL 468
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
++ +QC+C P Y G +CE + +C+S+PCL++G C+D++ + G +
Sbjct: 469 DQIGEFQCICMPGYEGVHCEVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQY- 527
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
++ +C S PC N C+D N ++ C CTE +TG +C+ +
Sbjct: 528 DVDECASTPCKNGAKCLDGPN-TYTCVCTEGYTGTHCEVD 566
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 78/148 (52%), Gaps = 15/148 (10%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD--- 96
S+V+ C ++PC+ HG C + + Y+C C P +SG NC+ +N +C SNPC+N G C D
Sbjct: 715 SEVNECNSNPCV-HGACRDSLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCKDMTS 773
Query: 97 -------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
E + G + I +C SNPCLN C+DD + CNC +TG C E
Sbjct: 774 GYVCTCREGFSGPNCQT-NINECASNPCLNQGTCIDD-VAGYKCNCLLPYTGATC--EVV 829
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
A +PC+N C S + +C+C
Sbjct: 830 LAPCAPSPCRNGGECRQSEDYESFSCVC 857
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 80/174 (45%), Gaps = 19/174 (10%)
Query: 17 NECETVKDVCNYGICVNTNGNGNS---KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSG 73
EC +D ++ T G + ++ C+ PC +C N Y+C C YSG
Sbjct: 842 GECRQSEDYESFSCVCPTGWQGQTCEVDINECVLSPCRHGASCQNTHGGYRCHCQAGYSG 901
Query: 74 NNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVC 123
NCE D DC NPC N G C D + ++G + E +I +C S+PC N C
Sbjct: 902 RNCETDIDDCRPNPCHNGGSCTDGINTAFCDCLPGFRGTFCEE-DINECASDPCRNGANC 960
Query: 124 VDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
D + S+ C C F+G +C EN+ T + C N TCV G TCLC
Sbjct: 961 TDCVD-SYTCTCPAGFSGIHC--ENNTPDCTESSCFNGGTCVD--GINSFTCLC 1009
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 42 VDHCLTDPCLGHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV--DE 97
V+ CL++PC GT C+ R + + C C ++G CE C PC N G C
Sbjct: 1268 VNECLSNPCDARGTQNCVQRVNDFHCECRAGHTGRRCESVINGCKGKPCKNGGTCAVASN 1327
Query: 98 VYKGRYWELP----------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+G + P + R C S CLN C+ G S C C FTG CQF
Sbjct: 1328 TARGFICKCPAGFEGATCENDARTCGSLRCLNGGTCIS-GPRSPTCLCLGPFTGPECQFP 1386
Query: 148 NSAACVTLNPCQNNATCVASPGEKQITCLC 177
S+ C+ NPC N TC + CLC
Sbjct: 1387 ASSPCLGGNPCYNQGTCEPTSESPFYRCLC 1416
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 86/182 (47%), Gaps = 26/182 (14%)
Query: 4 KPISLSTLCESDINECE--------TVKDVCNYGICV----NTNGNGNSKVDHCLTDPCL 51
+P CE++INEC T +D N +C T N +D C + PC
Sbjct: 592 RPGYTGHHCETNINECSSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCASSPC- 650
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--YKGRYWE---- 105
GTC+++ D Y+C C P Y+G+ C + +C+ NPC N G C D + + R E
Sbjct: 651 DSGTCLDKIDGYECACEPGYTGSMCNINIDECAGNPCHNGGTCEDGINGFTCRCPEGYHD 710
Query: 106 ---LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA 162
L E+ +C SNPC++ C D N + C+C ++G C N+ NPC N
Sbjct: 711 PTCLSEVNECNSNPCVHG-ACRDSLN-GYKCDCDPGWSGTNCDINNNE--CESNPCVNGG 766
Query: 163 TC 164
TC
Sbjct: 767 TC 768
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 29/188 (15%)
Query: 12 CESDINECETVKDVCNYGICVNT-NG------------NGNSKVDHCLTDPCLGHGTCIN 58
C S++NEC + + C +G C ++ NG N + + C ++PC+ GTC +
Sbjct: 713 CLSEVNECNS--NPCVHGACRDSLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCKD 770
Query: 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE 108
+ Y C C +SG NC+ + +C+SNPCLN G C+D+V Y G E+
Sbjct: 771 MTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEV-V 829
Query: 109 IRDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVAS 167
+ C +PC N C + SF C C + G+ C+ + + CV L+PC++ A+C +
Sbjct: 830 LAPCAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDIN-ECV-LSPCRHGASCQNT 887
Query: 168 PGEKQITC 175
G + C
Sbjct: 888 HGGYRCHC 895
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 32/171 (18%)
Query: 10 TLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGTC 56
T CE DI+EC+ D C+YG C + T + + ++ C + PC GTC
Sbjct: 561 THCEVDIDECD--PDPCHYGSCKDGVATFTCLCRPGYTGHHCETNINECSSQPCRHGGTC 618
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
+R + Y C C +G NCE + DC+S+PC + G C+D++ Y G +
Sbjct: 619 QDRDNAYLCFCLKGTTGPNCEINLDDCASSPC-DSGTCLDKIDGYECACEPGYTGSMCNI 677
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE----NSAACV 153
I +C NPC N C +DG F C C E + C E NS CV
Sbjct: 678 -NIDECAGNPCHNGGTC-EDGINGFTCRCPEGYHDPTCLSEVNECNSNPCV 726
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 72/183 (39%), Gaps = 37/183 (20%)
Query: 5 PISLSTLCESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQ 64
P C D+NEC +C +G GTC N Y+
Sbjct: 168 PSFHGPTCRQDVNECGQKPGLCRHG------------------------GTCHNEVGSYR 203
Query: 65 CLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD-----------EVYKGRYWELPEIRDCT 113
C+C ++G NCE+ CS +PC N G C + G+ E I DC
Sbjct: 204 CVCRATHTGPNCERPYVPCSPSPCQNGGTCRPTGDVTHECACLPGFTGQNCEE-NIDDCP 262
Query: 114 SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQI 173
N C N CVD N ++ C C ++TG+YC + + N CQN TC + G
Sbjct: 263 GNNCKNGGACVDGVN-TYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNC 321
Query: 174 TCL 176
C+
Sbjct: 322 VCV 324
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 15/143 (10%)
Query: 35 NGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP--CLNDG 92
+G + D C ++PC G C+ Y C C P + G C +D +C P C + G
Sbjct: 134 SGKSCQQADPCASNPCANGGQCLPFEASYICHCPPSFHGPTCRQDVNECGQKPGLCRHGG 193
Query: 93 VCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGE 142
C +EV + G E P + C+ +PC N C G+++ C C FTG+
Sbjct: 194 TCHNEVGSYRCVCRATHTGPNCERPYV-PCSPSPCQNGGTCRPTGDVTHECACLPGFTGQ 252
Query: 143 YCQFENSAACVTLNPCQNNATCV 165
C+ EN C N C+N CV
Sbjct: 253 NCE-ENIDDCPGNN-CKNGGACV 273
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 69/163 (42%), Gaps = 26/163 (15%)
Query: 5 PISLSTLCESDINECETVKDVCNYGI----CVN----TNGNGNSKVD------HCLTDPC 50
P T CE DINEC D C G CV+ T G S + C C
Sbjct: 935 PGFRGTFCEEDINEC--ASDPCRNGANCTDCVDSYTCTCPAGFSGIHCENNTPDCTESSC 992
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR-----YWE 105
GTC++ + + CLC P ++G+ C+ D +C S PCL+ G C D R +
Sbjct: 993 FNGGTCVDGINSFTCLCPPGFTGSYCQHDVNECDSQPCLHGGTCQDGCGSYRCTCPQGYT 1052
Query: 106 LPE----IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
P + C S+PC N C + + C C +TG YC
Sbjct: 1053 GPNCQNLVHWCDSSPCKNGGKCWQT-HTQYRCECPSGWTGLYC 1094
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCS--------SNPCLN 90
+ ++D CL+ PC GTC++ + Y+C C G +CE + DC+ S C N
Sbjct: 1181 SEEIDECLSHPCQNGGTCLDLPNTYKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFN 1240
Query: 91 DGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCV--CVDDGNLSFYCNCTED 138
+G CVD+V + G E ++ +C SNPC CV N F+C C
Sbjct: 1241 NGTCVDQVGGYSCTCPPGFVGERCEG-DVNECLSNPCDARGTQNCVQRVN-DFHCECRAG 1298
Query: 139 FTGEYCQFENSAACVTLNPCQNNATC-VASPGEKQITCLC 177
TG C E+ PC+N TC VAS + C C
Sbjct: 1299 HTGRRC--ESVINGCKGKPCKNGGTCAVASNTARGFICKC 1336
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 42 VDHCLTDP--CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
VD C P C GTC N Y C+C ++G +C ++ DC+S C + C D V
Sbjct: 296 VDECQLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFHGATCHDRVA 355
Query: 100 -------KGRYWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFENSA 150
GR L + D C SNPC C + N C C +TG C +
Sbjct: 356 SFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDE 415
Query: 151 ACVTLNPCQNNATCVASPGEKQITCL 176
+ NPC++ C+ + G + CL
Sbjct: 416 CSLGANPCEHAGKCINTLGSFECQCL 441
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 20/139 (14%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD--EVY 99
VD C PC TC + Y C C Y G NC ++ +C S+PC N G C+D Y
Sbjct: 1146 VDECSPSPCQNGATCTDYLGGYSCKCVAGYHGVNCSEEIDECLSHPCQNGGTCLDLPNTY 1205
Query: 100 K--------GRYWEL------PEIRDCTSNP-CLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
K G + E+ P + + +P C N+ CVD + C C F GE C
Sbjct: 1206 KCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTCVDQVG-GYSCTCPPGFVGERC 1264
Query: 145 QFENSAACVTLNPCQNNAT 163
+ + + C++ NPC T
Sbjct: 1265 EGDVN-ECLS-NPCDARGT 1281
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWEL--- 106
C G C++ + + C C Y+G+ CE +CS +PC N C D Y G Y
Sbjct: 1116 CQHGGLCVDAGNTHHCRCQAGYTGSYCEDLVDECSPSPCQNGATCTD--YLGGYSCKCVA 1173
Query: 107 --------PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNP- 157
EI +C S+PC N C+D N ++ C+C G +C+ ++P
Sbjct: 1174 GYHGVNCSEEIDECLSHPCQNGGTCLDLPN-TYKCSCPRGTQGVHCEINVDDCNPPVDPV 1232
Query: 158 -----CQNNATCVASPGEKQITC 175
C NN TCV G TC
Sbjct: 1233 SRSPKCFNNGTCVDQVGGYSCTC 1255
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 21/148 (14%)
Query: 45 CLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY 103
CLT+PC GTC + Y+C C P +SG +C++ + C+SNPC N G C+ ++ Y
Sbjct: 106 CLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQAD-PCASNPCANGGQCLP--FEASY 162
Query: 104 -------WELP----EIRDCTSNP--CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ P ++ +C P C + C ++ S+ C C TG C E
Sbjct: 163 ICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEVG-SYRCVCRATHTGPNC--ERPY 219
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLCL 178
+ +PCQN TC + G+ C CL
Sbjct: 220 VPCSPSPCQNGGTCRPT-GDVTHECACL 246
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 53/142 (37%), Gaps = 20/142 (14%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC--VDEV--------- 98
CL G C + C+C + G C+ N C S PC N G C VD
Sbjct: 31 CLNGGKCEAANGTEACVCGGAFVGPRCQDPN-PCLSTPCKNAGTCHVVDRRGVADYACSC 89
Query: 99 ---YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+ G P C +NPC N C + C C ++G+ CQ + A
Sbjct: 90 ALGFSGPLCLTPLDNACLTNPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCAS--- 146
Query: 156 NPCQNNATCVASPGEKQITCLC 177
NPC N C+ P E C C
Sbjct: 147 NPCANGGQCL--PFEASYICHC 166
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 45 CLTDPCLGHGTCINRSDR----YQCLCTPRYSGNNC--EKDNGDCSSNPCLNDGVC---V 95
CL+ PC GTC R Y C C +SG C DN C +NPC N G C
Sbjct: 63 CLSTPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNA-CLTNPCRNGGTCDLLT 121
Query: 96 DEVYKGR---YWELP---EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
YK R W + C SNPC N C+ S+ C+C F G C+ + +
Sbjct: 122 LTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPF-EASYICHCPPSFHGPTCRQDVN 180
Query: 150 AACVTLNPCQNNATCVASPGEKQITC 175
C++ TC G + C
Sbjct: 181 ECGQKPGLCRHGGTCHNEVGSYRCVC 206
>sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus
GN=Notch1 PE=2 SV=2
Length = 2531
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 26/160 (16%)
Query: 12 CESDINECETVKDVCNY-GICVNTNGNGNSK-------------VDHCLTDPCLGHGTCI 57
C D++EC + C + G C+NT G+ + V+ C+++PC TC+
Sbjct: 409 CSQDVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCL 468
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
++ +QC+C P Y G CE + +C+S+PCL++G CVD++ + G +
Sbjct: 469 DQIGEFQCICMPGYEGVYCEINTDECASSPCLHNGRCVDKINEFLCQCPKGFSGHLCQY- 527
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
++ +C S PC N C+D N ++ C CTE +TG +C+ +
Sbjct: 528 DVDECASTPCKNGAKCLDGPN-TYTCVCTEGYTGTHCEVD 566
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C+ PC +C N + Y+CLC Y+G NCE D DC NPC N G C D V
Sbjct: 870 INECVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTDGVNAA 929
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
++G + E +I +C +NPC N C D + S+ C C F G +C EN+
Sbjct: 930 FCDCLPGFQGAFCE-EDINECATNPCQNGANCTDCVD-SYTCTCPTGFNGIHC--ENNTP 985
Query: 152 CVTLNPCQNNATCVASPGEKQITCLC 177
T + C N TCV G TCLC
Sbjct: 986 DCTESSCFNGGTCVD--GINSFTCLC 1009
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 42 VDHCLTDPCLGHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV--DE 97
V+ CL++PC GT C+ R + + C C ++G CE C PC N GVC
Sbjct: 1268 VNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCRNGGVCAVASN 1327
Query: 98 VYKGRYWELP----------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+G P + R C S CLN C+ G S C C FTG CQF
Sbjct: 1328 TARGFICRCPARFEGATCENDARTCGSLRCLNGGTCIS-GPRSPTCLCLGSFTGPECQFP 1386
Query: 148 NSAACVTLNPCQNNATCVASPGEKQITCLC 177
S+ CV NPC N TC + CLC
Sbjct: 1387 ASSPCVGSNPCYNQGTCEPTSESPFYRCLC 1416
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 27/188 (14%)
Query: 12 CESDINECET---VKDVCNYGI------CVNTNGNGNSKVD--HCLTDPCLGHGTCINRS 60
C S++NEC + + C G+ C N ++ C ++PC+ GTC + +
Sbjct: 713 CLSEVNECNSNPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECESNPCVNGGTCKDMT 772
Query: 61 DRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPEIR 110
Y C C +SG NC+ + +C+SNPCLN G C+D+V Y G E+ +
Sbjct: 773 SGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEV-VLA 831
Query: 111 DCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPG 169
C ++PC N VC + + SF C C + G+ C+ + + CV +PC++ A+C + G
Sbjct: 832 PCATSPCKNSGVCKESEDYESFSCVCPTGWQGQTCEIDIN-ECVK-SPCRHGASCQNTNG 889
Query: 170 EKQITCLC 177
+ CLC
Sbjct: 890 SYR--CLC 895
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 28/161 (17%)
Query: 10 TLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGTC 56
T CE DI+EC+ D C+ G+C + T + + ++ C + PC GTC
Sbjct: 561 THCEVDIDECD--PDPCHIGLCKDGVATFTCLCQPGYTGHHCETNINECHSQPCRHGGTC 618
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
+R + Y CLC +G NCE + DC+SNPC + G C+D++ Y G +
Sbjct: 619 QDRDNYYLCLCLKGTTGPNCEINLDDCASNPC-DSGTCLDKIDGYECACEPGYTGSMCNV 677
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
I +C +PC N C +DG F C C E + C E
Sbjct: 678 -NIDECAGSPCHNGGTC-EDGIAGFTCRCPEGYHDPTCLSE 716
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 35 NGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP--CLNDG 92
+G + D C ++PC G C+ Y C C P + G C +D +CS NP C + G
Sbjct: 134 SGKSCQQADPCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVNECSQNPGLCRHGG 193
Query: 93 VCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGE 142
C +E+ + G + ELP + C+ +PC N C G+ + C C F G+
Sbjct: 194 TCHNEIGSYRCACRATHTGPHCELPYV-PCSPSPCQNGGTCRPTGDTTHECACLPGFAGQ 252
Query: 143 YCQFENSAACVTLNPCQNNATCV 165
C+ EN C N C+N CV
Sbjct: 253 NCE-ENVDDCPGNN-CKNGGACV 273
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 37/176 (21%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRY 71
C D+NEC +C +G GTC N Y+C C +
Sbjct: 175 CRQDVNECSQNPGLCRHG------------------------GTCHNEIGSYRCACRATH 210
Query: 72 SGNNCEKDNGDCSSNPCLNDGVCVD-----------EVYKGRYWELPEIRDCTSNPCLND 120
+G +CE CS +PC N G C + G+ E + DC N C N
Sbjct: 211 TGPHCELPYVPCSPSPCQNGGTCRPTGDTTHECACLPGFAGQNCE-ENVDDCPGNNCKNG 269
Query: 121 CVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCL 176
CVD N ++ C C ++TG+YC + + N CQN TC S G C+
Sbjct: 270 GACVDGVN-TYNCRCPPEWTGQYCTEDVDECQLMPNACQNAGTCHNSHGGYNCVCV 324
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------Y 99
C G C++ D++ C C Y+G+ CE + +CS NPC N C D + Y
Sbjct: 1116 CQHGGLCVDEEDKHYCHCQAGYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGY 1175
Query: 100 KGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNP-- 157
G EI +C S PC N C+D N ++ C+C G +C+ L+P
Sbjct: 1176 HGSNCS-EEINECLSQPCQNGGTCIDLTN-TYKCSCPRGTQGVHCEINVDDCHPPLDPAS 1233
Query: 158 ----CQNNATCVASPGEKQITC 175
C NN TCV G TC
Sbjct: 1234 RSPKCFNNGTCVDQVGGYTCTC 1255
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 69/164 (42%), Gaps = 28/164 (17%)
Query: 5 PISLSTLCESDINECETVKDVCNYGI----CVN-------TNGNG---NSKVDHCLTDPC 50
P CE DINEC T + C G CV+ T NG + C C
Sbjct: 935 PGFQGAFCEEDINECAT--NPCQNGANCTDCVDSYTCTCPTGFNGIHCENNTPDCTESSC 992
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPE-- 108
GTC++ + + CLC P ++G+ C+ D +C S PCL+ G C D Y P+
Sbjct: 993 FNGGTCVDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDS-YGTYKCTCPQGY 1051
Query: 109 --------IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
+R C S PC N C N ++C C +TG C
Sbjct: 1052 TGLNCQNLVRWCDSAPCKNGGKCWQT-NTQYHCECRSGWTGFNC 1094
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 42 VDHCLTDP--CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
VD C P C GTC N Y C+C ++G +C + DC+S C C D V
Sbjct: 296 VDECQLMPNACQNAGTCHNSHGGYNCVCVNGWTGEDCSDNIDDCASAACFQGATCHDRVA 355
Query: 100 -------KGRYWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFENSA 150
GR L + D C SNPC C + N C C +TG C +
Sbjct: 356 SFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPRGYTGPACSQDVDE 415
Query: 151 ACVTLNPCQNNATCVASPGEKQITCL 176
+ NPC++ C+ + G + CL
Sbjct: 416 CALGANPCEHAGKCLNTLGSFECQCL 441
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 18/122 (14%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD--EV 98
+VD C +PC TC + + C C Y G+NC ++ +C S PC N G C+D
Sbjct: 1145 EVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCIDLTNT 1204
Query: 99 YK--------GRYWEL------PEIRDCTSNP-CLNDCVCVDDGNLSFYCNCTEDFTGEY 143
YK G + E+ P + + +P C N+ CVD + C C F GE
Sbjct: 1205 YKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVG-GYTCTCPPGFVGER 1263
Query: 144 CQ 145
C+
Sbjct: 1264 CE 1265
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDC--------SSNPCLN 90
+ +++ CL+ PC GTCI+ ++ Y+C C G +CE + DC S C N
Sbjct: 1181 SEEINECLSQPCQNGGTCIDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFN 1240
Query: 91 DGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCV--CVDDGNLSFYCNCTED 138
+G CVD+V + G E ++ +C SNPC CV N F+C C
Sbjct: 1241 NGTCVDQVGGYTCTCPPGFVGERCEG-DVNECLSNPCDPRGTQNCVQRVN-DFHCECRAG 1298
Query: 139 FTGEYCQFENSAACVTLNPCQNNATC-VASPGEKQITCLC 177
TG C E+ PC+N C VAS + C C
Sbjct: 1299 HTGRRC--ESVINGCRGKPCRNGGVCAVASNTARGFICRC 1336
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 42 VDHCLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK 100
+ CL +PC GTC + Y+C C P +SG +C++ + C+SNPC N G C+ ++
Sbjct: 103 ANACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQAD-PCASNPCANGGQCLP--FE 159
Query: 101 GRY-------WELP----EIRDCTSNP--CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
Y + P ++ +C+ NP C + C ++ S+ C C TG +C+
Sbjct: 160 SSYICGCPPGFHGPTCRQDVNECSQNPGLCRHGGTCHNEIG-SYRCACRATHTGPHCELP 218
Query: 148 NSAACVTLNPCQNNATCVASPGEKQITCLCL 178
+ +PCQN TC + G+ C CL
Sbjct: 219 YVP--CSPSPCQNGGTCRPT-GDTTHECACL 246
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC--------VDEV--- 98
CL G C + C+C+ + G C+ D C S PC N G C VD
Sbjct: 31 CLNGGRCEVANGTEACVCSGAFVGQRCQ-DPSPCLSTPCKNAGTCYVVDHGGIVDYACSC 89
Query: 99 ---YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+ G P C +NPC N C + C C ++G+ CQ + A
Sbjct: 90 PLGFSGPLCLTPLANACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCAS--- 146
Query: 156 NPCQNNATCVASPGEKQITCLC 177
NPC N C+ P E C C
Sbjct: 147 NPCANGGQCL--PFESSYICGC 166
>sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1
PE=1 SV=3
Length = 2531
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 26/160 (16%)
Query: 12 CESDINECETVKDVCNY-GICVNTNGNGNSK-------------VDHCLTDPCLGHGTCI 57
C D++EC + C + G C+NT G+ + V+ C+++PC TC+
Sbjct: 409 CSQDVDECALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCL 468
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELP 107
++ +QC+C P Y G CE + +C+S+PCL++G C+D++ + G +
Sbjct: 469 DQIGEFQCICMPGYEGVYCEINTDECASSPCLHNGHCMDKINEFQCQCPKGFNGHLCQY- 527
Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
++ +C S PC N C+D N ++ C CTE +TG +C+ +
Sbjct: 528 DVDECASTPCKNGAKCLDGPN-TYTCVCTEGYTGTHCEVD 566
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 16/146 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C+ PC +C N + Y+CLC Y+G NCE D DC NPC N G C D +
Sbjct: 870 INECVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCRPNPCHNGGSCTDGINTA 929
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
++G + E +I +C SNPC N C D + S+ C C F G +C EN+
Sbjct: 930 FCDCLPGFQGAFCE-EDINECASNPCQNGANCTDCVD-SYTCTCPVGFNGIHC--ENNTP 985
Query: 152 CVTLNPCQNNATCVASPGEKQITCLC 177
T + C N TCV G TCLC
Sbjct: 986 DCTESSCFNGGTCVD--GINSFTCLC 1009
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 65/150 (43%), Gaps = 15/150 (10%)
Query: 42 VDHCLTDPCLGHGT--CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV--DE 97
V+ CL++PC GT C+ R + + C C ++G CE C PC N GVC
Sbjct: 1268 VNECLSNPCDPRGTQNCVQRVNDFHCECRAGHTGRRCESVINGCRGKPCKNGGVCAVASN 1327
Query: 98 VYKGRYWELP----------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+G P + R C S CLN C+ G S C C FTG CQF
Sbjct: 1328 TARGFICRCPAGFEGATCENDARTCGSLRCLNGGTCIS-GPRSPTCLCLGSFTGPECQFP 1386
Query: 148 NSAACVTLNPCQNNATCVASPGEKQITCLC 177
S+ CV NPC N TC + CLC
Sbjct: 1387 ASSPCVGSNPCYNQGTCEPTSENPFYRCLC 1416
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 16/146 (10%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
+ C ++PC+ GTC + + Y C C +SG NC+ + +C+SNPCLN G C+D+V
Sbjct: 755 NECESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYK 814
Query: 99 ------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTGEYCQFENSAA 151
Y G E+ + C ++PC N VC + + SF C C + G+ C+ + +
Sbjct: 815 CNCPLPYTGATCEV-VLAPCATSPCKNSGVCKESEDYESFSCVCPTGWQGQTCEVDIN-E 872
Query: 152 CVTLNPCQNNATCVASPGEKQITCLC 177
CV +PC++ A+C + G + CLC
Sbjct: 873 CVK-SPCRHGASCQNTNGSYR--CLC 895
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 28/161 (17%)
Query: 10 TLCESDINECETVKDVCNYGICVN-------------TNGNGNSKVDHCLTDPCLGHGTC 56
T CE DI+EC+ D C+YG C + T + + ++ C + PC GTC
Sbjct: 561 THCEVDIDECD--PDPCHYGSCKDGVATFTCLCQPGYTGHHCETNINECHSQPCRHGGTC 618
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
+R + Y CLC +G NCE + DC+SNPC + G C+D++ Y G +
Sbjct: 619 QDRDNSYLCLCLKGTTGPNCEINLDDCASNPC-DSGTCLDKIDGYECACEPGYTGSMCNV 677
Query: 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
I +C +PC N C +DG F C C E + C E
Sbjct: 678 -NIDECAGSPCHNGGTC-EDGIAGFTCRCPEGYHDPTCLSE 716
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 35 NGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP--CLNDG 92
+G + D C ++PC G C+ Y C C P + G C +D +CS NP C + G
Sbjct: 134 SGKSCQQADPCASNPCANGGQCLPFESSYICRCPPGFHGPTCRQDVNECSQNPGLCRHGG 193
Query: 93 VCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGE 142
C +E+ + G + ELP + C+ +PC N C G+ + C C F G+
Sbjct: 194 TCHNEIGSYRCACRATHTGPHCELPYV-PCSPSPCQNGGTCRPTGDTTHECACLPGFAGQ 252
Query: 143 YCQFENSAACVTLNPCQNNATCV 165
C+ EN C N C+N CV
Sbjct: 253 NCE-ENVDDCPGNN-CKNGGACV 273
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------Y 99
C G C++ D++ C C Y+G+ CE + +CS NPC N C D + Y
Sbjct: 1116 CQHGGLCVDEGDKHYCHCQAGYTGSYCEDEVDECSPNPCQNGATCTDYLGGFSCKCVAGY 1175
Query: 100 KGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNP-- 157
G EI +C S PC N C+D N S+ C+C G +C+ L+P
Sbjct: 1176 HGSNCS-EEINECLSQPCQNGGTCIDLTN-SYKCSCPRGTQGVHCEINVDDCHPPLDPAS 1233
Query: 158 ----CQNNATCVASPGEKQITC 175
C NN TCV G TC
Sbjct: 1234 RSPKCFNNGTCVDQVGGYTCTC 1255
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 69/176 (39%), Gaps = 37/176 (21%)
Query: 12 CESDINECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRY 71
C D+NEC +C +G GTC N Y+C C +
Sbjct: 175 CRQDVNECSQNPGLCRHG------------------------GTCHNEIGSYRCACRATH 210
Query: 72 SGNNCEKDNGDCSSNPCLNDGVCVD-----------EVYKGRYWELPEIRDCTSNPCLND 120
+G +CE CS +PC N G C + G+ E + DC N C N
Sbjct: 211 TGPHCELPYVPCSPSPCQNGGTCRPTGDTTHECACLPGFAGQNCE-ENVDDCPGNNCKNG 269
Query: 121 CVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCL 176
CVD N ++ C C ++TG+YC + + N CQN TC + G C+
Sbjct: 270 GACVDGVN-TYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCHNTHGGYNCVCV 324
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 85/232 (36%), Gaps = 76/232 (32%)
Query: 5 PISLSTLCESDINECETVKDVCNYGI----CVNT-------NGNG---NSKVDHCLTDPC 50
P CE DINEC + C G CV++ NG + C C
Sbjct: 935 PGFQGAFCEEDINEC--ASNPCQNGANCTDCVDSYTCTCPVGFNGIHCENNTPDCTESSC 992
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE--VYK-------- 100
GTC++ + + CLC P ++G+ C+ D +C S PCL+ G C D YK
Sbjct: 993 FNGGTCVDGINSFTCLCPPGFTGSYCQYDVNECDSRPCLHGGTCQDSYGTYKCTCPQGYT 1052
Query: 101 -------------------GRYWELPEIRDC----------------------------T 113
GR W+ C
Sbjct: 1053 GLNCQNLVRWCDSAPCKNGGRCWQTNTQYHCECRSGWTGVNCDVLSVSCEVAAQKRGIDV 1112
Query: 114 SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+ C + +CVD+G+ YC+C +TG YC+ E + NPCQN ATC
Sbjct: 1113 TLLCQHGGLCVDEGD-KHYCHCQAGYTGSYCEDEVDE--CSPNPCQNGATCT 1161
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 42 VDHCLTDP--CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
VD C P C GTC N Y C+C ++G +C ++ DC+S C C D V
Sbjct: 296 VDECQLMPNACQNGGTCHNTHGGYNCVCVNGWTGEDCSENIDDCASAACFQGATCHDRVA 355
Query: 100 -------KGRYWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQFENSA 150
GR L + D C SNPC C + N C C +TG C +
Sbjct: 356 SFYCECPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDE 415
Query: 151 ACVTLNPCQNNATCVASPGEKQITCL 176
+ NPC++ C+ + G + CL
Sbjct: 416 CALGANPCEHAGKCLNTLGSFECQCL 441
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDC--------SSNPCLN 90
+ +++ CL+ PC GTCI+ ++ Y+C C G +CE + DC S C N
Sbjct: 1181 SEEINECLSQPCQNGGTCIDLTNSYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFN 1240
Query: 91 DGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCV--CVDDGNLSFYCNCTED 138
+G CVD+V + G E ++ +C SNPC CV N F+C C
Sbjct: 1241 NGTCVDQVGGYTCTCPPGFVGERCEG-DVNECLSNPCDPRGTQNCVQRVN-DFHCECRAG 1298
Query: 139 FTGEYCQFENSAACVTLNPCQNNATC-VASPGEKQITCLC 177
TG C E+ PC+N C VAS + C C
Sbjct: 1299 HTGRRC--ESVINGCRGKPCKNGGVCAVASNTARGFICRC 1336
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 21/148 (14%)
Query: 45 CLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY 103
CL +PC GTC + Y+C C P +SG +C++ + C+SNPC N G C+ ++ Y
Sbjct: 106 CLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQAD-PCASNPCANGGQCLP--FESSY 162
Query: 104 -------WELP----EIRDCTSNP--CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ P ++ +C+ NP C + C ++ S+ C C TG +C+
Sbjct: 163 ICRCPPGFHGPTCRQDVNECSQNPGLCRHGGTCHNEIG-SYRCACRATHTGPHCELPYVP 221
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLCL 178
+ +PCQN TC + G+ C CL
Sbjct: 222 --CSPSPCQNGGTCRPT-GDTTHECACL 246
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD---- 96
+VD C +PC TC + + C C Y G+NC ++ +C S PC N G C+D
Sbjct: 1145 EVDECSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLSQPCQNGGTCIDLTNS 1204
Query: 97 ------EVYKGRYWEL------PEIRDCTSNP-CLNDCVCVDDGNLSFYCNCTEDFTGEY 143
+G + E+ P + + +P C N+ CVD + C C F GE
Sbjct: 1205 YKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTCVDQVG-GYTCTCPPGFVGER 1263
Query: 144 CQ 145
C+
Sbjct: 1264 CE 1265
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 55/142 (38%), Gaps = 20/142 (14%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC--------VDEV--- 98
CL G C + C+C+ + G C+ D+ C S PC N G C VD
Sbjct: 31 CLNGGRCEVANGTEACVCSGAFVGQRCQ-DSNPCLSTPCKNAGTCHVVDHGGTVDYACSC 89
Query: 99 ---YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+ G P C +NPC N C + C C ++G+ CQ + A
Sbjct: 90 PLGFSGPLCLTPLDNACLANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCAS--- 146
Query: 156 NPCQNNATCVASPGEKQITCLC 177
NPC N C+ P E C C
Sbjct: 147 NPCANGGQCL--PFESSYICRC 166
Score = 34.3 bits (77), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 58/146 (39%), Gaps = 17/146 (11%)
Query: 45 CLTDPCLGHGTC----INRSDRYQCLCTPRYSGNNC--EKDNGDCSSNPCLNDGVC---V 95
CL+ PC GTC + Y C C +SG C DN C +NPC N G C
Sbjct: 63 CLSTPCKNAGTCHVVDHGGTVDYACSCPLGFSGPLCLTPLDNA-CLANPCRNGGTCDLLT 121
Query: 96 DEVYKGR---YWELP---EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
YK R W + C SNPC N C+ + S+ C C F G C+ + +
Sbjct: 122 LTEYKCRCPPGWSGKSCQQADPCASNPCANGGQCLPFES-SYICRCPPGFHGPTCRQDVN 180
Query: 150 AACVTLNPCQNNATCVASPGEKQITC 175
C++ TC G + C
Sbjct: 181 ECSQNPGLCRHGGTCHNEIGSYRCAC 206
>sp|Q9IAT6|DLLC_DANRE Delta-like protein C OS=Danio rerio GN=dlc PE=2 SV=1
Length = 664
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 66/131 (50%), Gaps = 15/131 (11%)
Query: 45 CLTDPCLGHGTCINR-SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD------- 96
C PC GTC+ + S Y C C P Y G+NCEK CSS+PC N G C+D
Sbjct: 347 CADGPCFNGGTCMEKGSGSYSCRCPPGYMGSNCEKKIDRCSSDPCANGGQCLDLGNKATC 406
Query: 97 ---EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACV 153
+ G E I DC+SNPC N CVD N + C CT F+G+ C+ + A
Sbjct: 407 RCRPGFTGSRCET-NIDDCSSNPCQNAGTCVDGIN-GYTCTCTLGFSGKDCRVRSDAC-- 462
Query: 154 TLNPCQNNATC 164
+ PCQN TC
Sbjct: 463 SFMPCQNGGTC 473
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 31/181 (17%)
Query: 11 LCESDINECETVKDVCNYGICVNTNGNGNS---------------KVDHCLTDPCLGHGT 55
C D+N C K N C NT G G+ + + C ++PC G+
Sbjct: 261 FCNEDLNFCTNHKPCRNDATCTNT-GQGSYTCICKPGFSGKNCEIETNECDSNPCKNGGS 319
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE-----------VYKGRYW 104
C ++ + Y C C + G NCE C+ PC N G C+++ Y G
Sbjct: 320 CNDQENDYTCTCPQGFYGKNCEVSAMTCADGPCFNGGTCMEKGSGSYSCRCPPGYMGSNC 379
Query: 105 ELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATC 164
E +I C+S+PC N C+D GN + C C FTG C+ N C + NPCQN TC
Sbjct: 380 E-KKIDRCSSDPCANGGQCLDLGNKA-TCRCRPGFTGSRCE-TNIDDCSS-NPCQNAGTC 435
Query: 165 V 165
V
Sbjct: 436 V 436
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 20/147 (13%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVD----- 96
D C P HGTC + +QC C + G C +D C+++ PC ND C +
Sbjct: 232 DECTRHPGCLHGTC---NQPFQCTCKEGWGGLFCNEDLNFCTNHKPCRNDATCTNTGQGS 288
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ G+ E+ E +C SNPC N C D N + C C + F G+ C E SA
Sbjct: 289 YTCICKPGFSGKNCEI-ETNECDSNPCKNGGSCNDQEN-DYTCTCPQGFYGKNC--EVSA 344
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLC 177
PC N TC+ G +C C
Sbjct: 345 MTCADGPCFNGGTCMEK-GSGSYSCRC 370
Score = 43.5 bits (101), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 5 PISLSTLCESDINECETVK--------DVCNYGICVNTNGNGNSK----VDHCLTDPCLG 52
P + + CE I+ C + D+ N C G S+ +D C ++PC
Sbjct: 372 PGYMGSNCEKKIDRCSSDPCANGGQCLDLGNKATCRCRPGFTGSRCETNIDDCSSNPCQN 431
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC 94
GTC++ + Y C CT +SG +C + CS PC N G C
Sbjct: 432 AGTCVDGINGYTCTCTLGFSGKDCRVRSDACSFMPCQNGGTC 473
>sp|P31695|NOTC4_MOUSE Neurogenic locus notch homolog protein 4 OS=Mus musculus GN=Notch4
PE=1 SV=2
Length = 1964
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 66/138 (47%), Gaps = 14/138 (10%)
Query: 49 PCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---------- 98
PC G+CIN + CLC P Y+G+ CE D+ +C S PC C+D +
Sbjct: 442 PCEHGGSCINTPGSFNCLCLPGYTGSRCEADHNECLSQPCHPGSTCLDLLATFHCLCPPG 501
Query: 99 YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPC 158
+GR E+ E+ +CTSNPCLN C D N F C C FTG C+ + T PC
Sbjct: 502 LEGRLCEV-EVNECTSNPCLNQAACHDLLN-GFQCLCLPGFTGARCEKDMDECSST--PC 557
Query: 159 QNNATCVASPGEKQITCL 176
N C PG CL
Sbjct: 558 ANGGRCRDQPGAFYCECL 575
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 63/116 (54%), Gaps = 12/116 (10%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
+V+ C ++PCL C + + +QCLC P ++G CEKD +CSS PC N G C D+
Sbjct: 510 EVNECTSNPCLNQAACHDLLNGFQCLCLPGFTGARCEKDMDECSSTPCANGGRCRDQPGA 569
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
++G + E E+ +C S+PC C+D +F+C C FTG+ C+
Sbjct: 570 FYCECLPGFEGPHCEK-EVDECLSDPCPVGASCLDLPG-AFFCLCRPGFTGQLCEV 623
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 65/151 (43%), Gaps = 15/151 (9%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
+ +V C + PCL G+C R + Y C C P ++G +C+ C S CLN G CV++
Sbjct: 724 SEEVTACHSGPCLNGGSCSIRPEGYSCTCLPSHTGRHCQTAVDHCVSASCLNGGTCVNKP 783
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
++G + E C +PC N C D C C+ +TG CQ
Sbjct: 784 GTFFCLCATGFQGLHCEEKTNPSCADSPCRNKATCQDTPR-GARCLCSPGYTGSSCQ--T 840
Query: 149 SAACVTLNPCQNNATCVASPGEKQITCLCLK 179
PC + A C+ S CLCL+
Sbjct: 841 LIDLCARKPCPHTARCLQS--GPSFQCLCLQ 869
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 59/151 (39%), Gaps = 17/151 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
++ C +PC TC+ + Y C C P Y G NC K C S PC N G C G
Sbjct: 927 MNPCEPNPCHHGSTCVPQPSGYVCQCAPGYEGQNCSKVLEACQSQPCHNHGTCTSRP-GG 985
Query: 102 RYWELP----------EIRDCTSNPCL--NDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
+ P ++ +C PC C N +FYC C TG+ C+ E
Sbjct: 986 FHCACPPGFVGLRCEGDVDECLDRPCHPSGTAACHSLAN-AFYCQCLPGHTGQRCEVEMD 1044
Query: 150 AACVTLNPCQNNATCVASPGEKQ-ITCLCLK 179
PC N +C + G TC C K
Sbjct: 1045 L--CQSQPCSNGGSCEITTGPPPGFTCHCPK 1073
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 68/153 (44%), Gaps = 22/153 (14%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDC--SSNPCLNDGVCVDEVYK 100
D C +PC G C+ + QC C P + G+ CE+D +C PC C + +
Sbjct: 155 DFCSANPCANGGVCLATYPQIQCRCPPGFEGHTCERDINECFLEPGPCPQGTSCHNTL-- 212
Query: 101 GRY-------WELPEIR----DCTSNPCLNDCVC--VDDGNLSFY-CNCTEDFTGEYCQF 146
G Y E P+ + C CLN C V +G+ +F+ C C FTG C+
Sbjct: 213 GSYQCLCPVGQEGPQCKLRKGACPPGSCLNGGTCQLVPEGHSTFHLCLCPPGFTGLDCEM 272
Query: 147 ENSAACVTLNPCQNNATCVASPGEKQITCLCLK 179
N CV CQN ATC+ G TCLC K
Sbjct: 273 -NPDDCVRHQ-CQNGATCLD--GLDTYTCLCPK 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-------YKGR 102
C GTC N + + C+C + G CE++ DC++ C C+D V GR
Sbjct: 323 CRNGGTCQNTAGSFHCVCVSGWGGAGCEENLDDCAAATCAPGSTCIDRVGSFSCLCPPGR 382
Query: 103 YWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQF---ENSAACVTLNP 157
L + D C S PC + C + S C C ++G C E A +P
Sbjct: 383 TGLLCHLEDMCLSQPCHVNAQCSTNPLTGSTLCICQPGYSGSTCHQDLDECQMAQQGPSP 442
Query: 158 CQNNATCVASPGEKQITCLCLK 179
C++ +C+ +PG CLCL
Sbjct: 443 CEHGGSCINTPGS--FNCLCLP 462
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 55/134 (41%), Gaps = 18/134 (13%)
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY------KGRYWEL 106
HG C R C+C ++G CE + G C S PC + G C + Y L
Sbjct: 666 HGHC----QRSLCVCDEGWTGPECETELGGCISTPCAHGGTCHPQPSGYNCTCPAGYMGL 721
Query: 107 ---PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNAT 163
E+ C S PCLN C + C C TG +CQ CV+ + C N T
Sbjct: 722 TCSEEVTACHSGPCLNGGSCSIRPE-GYSCTCLPSHTGRHCQTAVD-HCVSAS-CLNGGT 778
Query: 164 CVASPGEKQITCLC 177
CV PG CLC
Sbjct: 779 CVNKPGT--FFCLC 790
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 12 CESDINECETVKDVC--NYGICVNTNGNGN-------------SKVDHCLTDPCLGHGTC 56
C DI+ECE N G C NT G+ + +D C C TC
Sbjct: 308 CSEDIDECEARGPPRCRNGGTCQNTAGSFHCVCVSGWGGAGCEENLDDCAAATCAPGSTC 367
Query: 57 INRSDRYQCLCTPRYSGNNCEKD----------NGDCSSNPCLNDGVCV-DEVYKGR--Y 103
I+R + CLC P +G C + N CS+NP +C+ Y G +
Sbjct: 368 IDRVGSFSCLCPPGRTGLLCHLEDMCLSQPCHVNAQCSTNPLTGSTLCICQPGYSGSTCH 427
Query: 104 WELPE--IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNN 161
+L E + +PC + C++ SF C C +TG C+ +++ C++ PC
Sbjct: 428 QDLDECQMAQQGPSPCEHGGSCINTPG-SFNCLCLPGYTGSRCEADHN-ECLS-QPCHPG 484
Query: 162 ATCV 165
+TC+
Sbjct: 485 STCL 488
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 80/198 (40%), Gaps = 39/198 (19%)
Query: 12 CESDINECETVKDVCNYGI-CVNTNGN-------GNS------KVDHCLTDPCLGHGTCI 57
CE DINEC C G C NT G+ G + C CL GTC
Sbjct: 188 CERDINECFLEPGPCPQGTSCHNTLGSYQCLCPVGQEGPQCKLRKGACPPGSCLNGGTCQ 247
Query: 58 ----NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGRY 103
S + CLC P ++G +CE + DC + C N C+D + +KG
Sbjct: 248 LVPEGHSTFHLCLCPPGFTGLDCEMNPDDCVRHQCQNGATCLDGLDTYTCLCPKTWKG-- 305
Query: 104 WELPE-IRDCTSNP---CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQ 159
W+ E I +C + C N C + SF+C C + G C+ EN C C
Sbjct: 306 WDCSEDIDECEARGPPRCRNGGTCQNTAG-SFHCVCVSGWGGAGCE-ENLDDCAAAT-CA 362
Query: 160 NNATCVASPGEKQITCLC 177
+TC+ G +CLC
Sbjct: 363 PGSTCIDRVGS--FSCLC 378
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 61/153 (39%), Gaps = 23/153 (15%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE---------KDNGDCSSNPCLNDG 92
+D C PC C+ +QCLC ++G C+ G S C N G
Sbjct: 842 IDLCARKPCPHTARCLQSGPSFQCLCLQGWTGALCDFPLSCQMAAMSQGIEISGLCQNGG 901
Query: 93 VCVD----------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGE 142
+C+D ++G+ + + C NPC + CV + + C C + G+
Sbjct: 902 LCIDTGSSYFCRCPPGFQGKLCQD-NMNPCEPNPCHHGSTCVPQPS-GYVCQCAPGYEGQ 959
Query: 143 YCQFENSAACVTLNPCQNNATCVASPGEKQITC 175
C + AC + PC N+ TC + PG C
Sbjct: 960 NCS-KVLEACQS-QPCHNHGTCTSRPGGFHCAC 990
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 18/148 (12%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP---CLNDGVCVDEV- 98
D C+ C TC++ D Y CLC + G +C +D +C + C N G C +
Sbjct: 275 DDCVRHQCQNGATCLDGLDTYTCLCPKTWKGWDCSEDIDECEARGPPRCRNGGTCQNTAG 334
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
+ G E + DC + C C+D SF C C TG C E+
Sbjct: 335 SFHCVCVSGWGGAGCEE-NLDDCAAATCAPGSTCIDRVG-SFSCLCPPGRTGLLCHLED- 391
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
C++ PC NA C +P C+C
Sbjct: 392 -MCLS-QPCHVNAQCSTNPLTGSTLCIC 417
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 41/106 (38%), Gaps = 12/106 (11%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------Y 99
C G CI+ Y C C P + G C+ + C NPC + CV + Y
Sbjct: 897 CQNGGLCIDTGSSYFCRCPPGFQGKLCQDNMNPCEPNPCHHGSTCVPQPSGYVCQCAPGY 956
Query: 100 KGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
+G+ + C S PC N C F+C C F G C+
Sbjct: 957 EGQNCSK-VLEACQSQPCHNHGTCTSRPG-GFHCACPPGFVGLRCE 1000
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 80/243 (32%), Gaps = 80/243 (32%)
Query: 2 YF---KPISLSTLCESDINECETVKDVCNYG-ICV------------NTNGNGNSKV-DH 44
YF P LC+ ++N CE + C++G CV G SKV +
Sbjct: 910 YFCRCPPGFQGKLCQDNMNPCE--PNPCHHGSTCVPQPSGYVCQCAPGYEGQNCSKVLEA 967
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV--------- 95
C + PC HGTC +R + C C P + G CE D +C PC G
Sbjct: 968 CQSQPCHNHGTCTSRPGGFHCACPPGFVGLRCEGDVDECLDRPCHPSGTAACHSLANAFY 1027
Query: 96 ---DEVYKGRYWELPEIRDCTSNPCLN--DCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ G+ E+ E+ C S PC N C F C+C + F G C + A
Sbjct: 1028 CQCLPGHTGQRCEV-EMDLCQSQPCSNGGSCEITTGPPPGFTCHCPKGFEGPTC--SHKA 1084
Query: 151 ACVTLNPCQN--------------------------------------------NATCVA 166
++ C N N TC
Sbjct: 1085 LSCGIHHCHNGGLCLPSPKPGSPPLCACLSGFGGPDCLTPPAPPGCGPPSPCLHNGTCTE 1144
Query: 167 SPG 169
+PG
Sbjct: 1145 TPG 1147
Score = 31.6 bits (70), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 60/188 (31%), Gaps = 43/188 (22%)
Query: 4 KPISLSTLCESDINEC----------ETVKDVCNYGICVNTNGNGNSK----VDHCLTDP 49
P + CE D++EC + N C G+ + +D C + P
Sbjct: 991 PPGFVGLRCEGDVDECLDRPCHPSGTAACHSLANAFYCQCLPGHTGQRCEVEMDLCQSQP 1050
Query: 50 CLGHGTC---INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWEL 106
C G+C + C C + G C C + C N G+C+ G
Sbjct: 1051 CSNGGSCEITTGPPPGFTCHCPKGFEGPTCSHKALSCGIHHCHNGGLCLPSPKPGS---- 1106
Query: 107 PEIRDCTSNPCLNDCV-------------------CVDD---GNLSFYCNCTEDFTGEYC 144
P + C S DC+ C + GN F C C D G C
Sbjct: 1107 PPLCACLSGFGGPDCLTPPAPPGCGPPSPCLHNGTCTETPGLGNPGFQCTCPPDSPGPRC 1166
Query: 145 QFENSAAC 152
Q ++ C
Sbjct: 1167 QRPGASGC 1174
Score = 30.4 bits (67), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 113 TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVA 166
+ PC N C+ C C F GE CQF + C C+N +C A
Sbjct: 28 SPEPCANGGTCLRLSQGQGICQCAPGFLGETCQFPDP--CRDTQLCKNGGSCQA 79
Score = 30.0 bits (66), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 55/155 (35%), Gaps = 30/155 (19%)
Query: 48 DPCLGHGTCINRSD-RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-------- 98
+PC GTC+ S + C C P + G C+ + + C N G C +
Sbjct: 30 EPCANGGTCLRLSQGQGICQCAPGFLGETCQFPDPCRDTQLCKNGGSCQALLPTPPSSRS 89
Query: 99 ----------------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGE 142
+ G + C + C N C + C+C +TGE
Sbjct: 90 PTSPLTPHFSCTCPSGFTGDRCQTHLEELCPPSFCSNGGHCYVQASGRPQCSCEPGWTGE 149
Query: 143 YCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
CQ + + NPC N C+A+ QI C C
Sbjct: 150 QCQLRDF---CSANPCANGGVCLAT--YPQIQCRC 179
>sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus GN=Dll1 PE=2 SV=1
Length = 714
Score = 75.1 bits (183), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 78/189 (41%), Gaps = 27/189 (14%)
Query: 11 LCESDINECETVKDVCNYGICVNTN--------------GNGNSKVDHCLTDPCLGHGTC 56
C D+N C K N C NT N +VD C PC G+C
Sbjct: 283 FCNQDLNYCTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECAPSPCRNGGSC 342
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP--------- 107
+ D Y C C P + G CE C+ PC N G C D G P
Sbjct: 343 TDLEDSYSCTCPPGFYGKVCELSAMTCADGPCFNGGRCSDNPDGGYTCHCPAGFSGFNCE 402
Query: 108 -EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVA 166
+I C+S+PC N CVD GN S+ C C F+G YC+ +N C + +PC N TC
Sbjct: 403 KKIDLCSSSPCSNGAKCVDLGN-SYLCRCQTGFSGRYCE-DNVDDCAS-SPCANGGTCRD 459
Query: 167 SPGEKQITC 175
S + TC
Sbjct: 460 SVNDFSCTC 468
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
K+D C + PC C++ + Y C C +SG CE + DC+S+PC N G C D V
Sbjct: 404 KIDLCSSSPCSNGAKCVDLGNSYLCRCQTGFSGRYCEDNVDDCASSPCANGGTCRDSVND 463
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y GR P R C PC N C G + C C + + G CQF
Sbjct: 464 FSCTCPPGYTGRNCSAPVSR-CEHAPCHNGATCHQRGQ-RYMCECAQGYGGANCQF 517
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVD----- 96
D C+ P HGTC +QC C + G C +D C+ + PC N C +
Sbjct: 254 DECIRYPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCRNGATCTNTGQGS 310
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
Y G EL E+ +C +PC N C D + S+ C C F G+ C+ SA
Sbjct: 311 YTCSCRPGYTGANCEL-EVDECAPSPCRNGGSCTDLED-SYSCTCPPGFYGKVCEL--SA 366
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLC 177
PC N C +P + TC C
Sbjct: 367 MTCADGPCFNGGRCSDNP-DGGYTCHC 392
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 34 TNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
T N ++ V C PC TC R RY C C Y G NC+
Sbjct: 473 TGRNCSAPVSRCEHAPCHNGATCHQRGQRYMCECAQGYGGANCQ 516
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 73.6 bits (179), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 13/114 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
V+ C + PCL GTC+ + + C C Y+G C+ + C PC N G C D +
Sbjct: 4053 VNPCSSKPCLYGGTCVVDNGGFVCQCRGLYTGQRCQL-SPYCKDEPCKNGGTCFDSLDGA 4111
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
++G + +I +C+ NPCL+ +C ++ + S++CNC+ ++ G +C+
Sbjct: 4112 VCQCDSGFRGERCQ-SDIDECSGNPCLHGALC-ENTHGSYHCNCSHEYRGRHCE 4163
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 40 SKVDHCLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE- 97
+ + C ++PC G C + + Y C C+ Y G +CE CSS PCL G CV +
Sbjct: 4012 TATEDCASNPCQNGGVCNPSPAGGYYCKCSALYIGTHCEISVNPCSSKPCLYGGTCVVDN 4071
Query: 98 ---------VYKGRYWELPEIRDCTSNPCLNDCVCVD--DGNLSFYCNCTEDFTGEYCQF 146
+Y G+ +L C PC N C D DG + C C F GE CQ
Sbjct: 4072 GGFVCQCRGLYTGQRCQLSPY--CKDEPCKNGGTCFDSLDGAV---CQCDSGFRGERCQ- 4125
Query: 147 ENSAACVTLNPCQNNATCVASPGEKQITC 175
+ C + NPC + A C + G C
Sbjct: 4126 SDIDEC-SGNPCLHGALCENTHGSYHCNC 4153
Score = 46.6 bits (109), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 106 LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
L DC SNPC N VC +YC C+ + G +C E S + PC TCV
Sbjct: 4011 LTATEDCASNPCQNGGVCNPSPAGGYYCKCSALYIGTHC--EISVNPCSSKPCLYGGTCV 4068
Query: 166 ASPGEKQITCLC 177
G C C
Sbjct: 4069 VDNG--GFVCQC 4078
>sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla PE=1 SV=1
Length = 772
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 80/190 (42%), Gaps = 29/190 (15%)
Query: 11 LCESDINECETVKDVCNYGICVNTNGNGNS---------------KVDHCLTDPCLGHGT 55
C D+N C K N C NT G G+ +V+ C +PC G+
Sbjct: 286 FCNQDLNYCTHHKPCLNGATCSNT-GQGSYTCSCRPGFSGASCEIEVNECTGNPCRNGGS 344
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP-------- 107
C + + Y C C P + G NCE C+ PC N G C D G + + P
Sbjct: 345 CTDMENTYSCTCPPGFYGKNCELSAMTCADGPCFNGGRCADNPDGGYFCQCPTGYAGFNC 404
Query: 108 --EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165
+I C+S+PC N CVD N S+ C C + FTG C + + ++ PCQN TC
Sbjct: 405 EKKIDHCSSSPCSNGARCVDLVN-SYLCQCPDGFTGMNC--DRAGDECSMYPCQNGGTCQ 461
Query: 166 ASPGEKQITC 175
TC
Sbjct: 462 EGASGYMCTC 471
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
K+DHC + PC C++ + Y C C ++G NC++ +CS PC N G C +
Sbjct: 407 KIDHCSSSPCSNGARCVDLVNSYLCQCPDGFTGMNCDRAGDECSMYPCQNGGTCQEGASG 466
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y GR P R C NPC N C + N + C C + G CQF
Sbjct: 467 YMCTCPPGYTGRNCSSPVSR-CQHNPCHNGATCHERNN-RYVCACVSGYGGRNCQF 520
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 59/138 (42%), Gaps = 19/138 (13%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVD----- 96
D C+ P HGTC +QC C + G C +D C+ + PCLN C +
Sbjct: 257 DECIRYPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCLNGATCSNTGQGS 313
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ G E+ E+ +CT NPC N C D N ++ C C F G+ C+ SA
Sbjct: 314 YTCSCRPGFSGASCEI-EVNECTGNPCRNGGSCTDMEN-TYSCTCPPGFYGKNCEL--SA 369
Query: 151 ACVTLNPCQNNATCVASP 168
PC N C +P
Sbjct: 370 MTCADGPCFNGGRCADNP 387
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 34 TNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
T N +S V C +PC TC R++RY C C Y G NC+
Sbjct: 476 TGRNCSSPVSRCQHNPCHNGATCHERNNRYVCACVSGYGGRNCQ 519
>sp|Q5ZQU0|SNED1_RAT Sushi, nidogen and EGF-like domain-containing protein 1 OS=Rattus
norvegicus GN=Sned1 PE=2 SV=2
Length = 1403
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD---- 96
+VD C + PCL G+C + YQCLC+P Y G +CE + +C + PC N G C D
Sbjct: 753 EVDECQSQPCLHKGSCQDLIAGYQCLCSPGYEGVHCELETDECQAQPCRNGGSCRDLPGA 812
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
E + G + E E+ C S+PC + C +DG ++ C C E F G C+ S
Sbjct: 813 FICQCPEGFVGTHCET-EVDACASSPCQHGGRC-EDGGGAYLCVCPEGFFGYNCE-TVSD 869
Query: 151 ACVTLNPCQNNATCVASPGEKQITC 175
C + +PC C+AS G TC
Sbjct: 870 PCFS-SPCGGRGYCLASNGSHSCTC 893
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDN----GDCSSNPCLNDGVCVDE 97
VD C +DPCL G+C++ Y C+C + G CE + C SNPCLN G CVD
Sbjct: 388 VDECSSDPCLNGGSCVDLVGNYSCICVEPFEGPQCETGSYVVPSPCLSNPCLNGGTCVD- 446
Query: 98 VYKGRYWELPEI---RDCTSNPCLNDCVCVDDGNL----SFYCNCTEDFTGEYCQFENSA 150
+G E PE DC LNDC C + G + C C F G C+FE
Sbjct: 447 ADQGYVCECPEGFMGLDCRER-ILNDCDCRNGGRCLGANTTICQCPPGFFGLLCEFE--- 502
Query: 151 ACVTLNPCQNNATC 164
VT PC N C
Sbjct: 503 --VTATPCNMNTQC 514
Score = 63.2 bits (152), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD-CSSNPCLNDGVCVDEV----- 98
C + PC GTC D Y+C C R++G +CE D C+S PC N G C +
Sbjct: 584 CSSGPCRNGGTCKETGDEYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKC 643
Query: 99 -----YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+ GR+ E+ C +PC+N +C D G F C+C +TG CQ E
Sbjct: 644 DCPPGFSGRHCEI-APSPCFRSPCMNGGICEDLGT-DFSCHCQPGYTGHRCQAE 695
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 30 ICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD-CSSNPC 88
+C + +S C +DPC G+C D Y C C + G +CEK CSS PC
Sbjct: 530 VCHTDHNISHSLPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPHLCSSGPC 589
Query: 89 LNDGVCVDE----------VYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTED 138
N G C + + GR+ E+ + C S PC N C + C+C
Sbjct: 590 RNGGTCKETGDEYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIG-KYKCDCPPG 648
Query: 139 FTGEYCQFENSAACVTLNPCQNNATC 164
F+G +C+ S C +PC N C
Sbjct: 649 FSGRHCEIAPS-PCFR-SPCMNGGIC 672
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY------ 103
C G C S C+C Y+G CE D +CSS+PCLN G CVD V G Y
Sbjct: 358 CQNGGQCQAESSSAVCVCQAGYTGATCETDVDECSSDPCLNGGSCVDLV--GNYSCICVE 415
Query: 104 -WELPE--------IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
+E P+ C SNPCLN CV D + + C C E F G C+
Sbjct: 416 PFEGPQCETGSYVVPSPCLSNPCLNGGTCV-DADQGYVCECPEGFMGLDCR 465
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 14/132 (10%)
Query: 54 GTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC----------VDEVYKGRY 103
G C+ Y C+C + N C S+PC N G C + GR+
Sbjct: 518 GYCMEYGGSYLCVCHTDH--NISHSLPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRH 575
Query: 104 WELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNAT 163
E C+S PC N C + G+ + C C FTG +C+ +C + PC N T
Sbjct: 576 CEKARPHLCSSGPCRNGGTCKETGD-EYRCTCPYRFTGRHCEIGKPDSCAS-GPCHNGGT 633
Query: 164 CVASPGEKQITC 175
C G+ + C
Sbjct: 634 CFHYIGKYKCDC 645
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 80/216 (37%), Gaps = 68/216 (31%)
Query: 14 SDINECETVKDVCNYGICVNTNGNGNSKVDHC--------LTDPCLGHGTCIN----RSD 61
+D+ E ET +V G + +V C + PCL G CI+ +
Sbjct: 234 ADMAEVETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLRPCLNGGKCIDDCVTGNP 293
Query: 62 RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------------------- 98
Y C C ++G C D +C+S+PC N G C V
Sbjct: 294 SYTCSCLAGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFSCQCPAGFQGPTCESAQSPC 353
Query: 99 -------------------------YKGRYWELPEIRDCTSNPCLNDCVCVD-DGNLSFY 132
Y G E ++ +C+S+PCLN CVD GN S
Sbjct: 354 DNKVCQNGGQCQAESSSAVCVCQAGYTGATCET-DVDECSSDPCLNGGSCVDLVGNYS-- 410
Query: 133 CNCTEDFTGEYCQ---FENSAACVTLNPCQNNATCV 165
C C E F G C+ + + C++ NPC N TCV
Sbjct: 411 CICVEPFEGPQCETGSYVVPSPCLS-NPCLNGGTCV 445
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV 95
++VD C + PC G C + Y C+C + G NCE + C S+PC G C+
Sbjct: 828 TEVDACASSPCQHGGRCEDGGGAYLCVCPEGFFGYNCETVSDPCFSSPCGGRGYCL 883
Score = 31.6 bits (70), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 16/86 (18%)
Query: 8 LSTLCESDINECETVKDVCNYG----------ICVNTNG----NGNSKVDHCLTDPCLGH 53
+ T CE++++ C + C +G +CV G N + D C + PC G
Sbjct: 822 VGTHCETEVDACAS--SPCQHGGRCEDGGGAYLCVCPEGFFGYNCETVSDPCFSSPCGGR 879
Query: 54 GTCINRSDRYQCLCTPRYSGNNCEKD 79
G C+ + + C C Y+G +C K+
Sbjct: 880 GYCLASNGSHSCTCKVGYTGKDCTKE 905
>sp|Q5T1H1|EYS_HUMAN Protein eyes shut homolog OS=Homo sapiens GN=EYS PE=1 SV=5
Length = 3165
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 95/237 (40%), Gaps = 65/237 (27%)
Query: 4 KPISLSTLCESDINECETVKDVCNYGICVNTNGNG-------------NSKVDHCLTDPC 50
+P +LCE +INEC + + N G CV+ V+ C PC
Sbjct: 917 RPGFSGSLCEIEINECSS-EPCKNNGTCVDLTNRFFCNCEPEYHGPFCELDVNKCKISPC 975
Query: 51 LGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV------------ 98
L C+ R+D Y CLC P Y+G NCE + +C S PCL+DGVC+D +
Sbjct: 976 LDEENCVYRTDGYNCLCAPGYTGINCEINLDECLSEPCLHDGVCIDGINHYTCDCKSGFF 1035
Query: 99 ----------------YKGRYWEL------------------PEIRDCTSNPCLNDCVCV 124
GR EL +I DCTS PC+N+ C
Sbjct: 1036 GTHCETNANDCLSNPCLHGRCTELINEYPCSCDADGTSTQCKIKINDCTSIPCMNEGFCQ 1095
Query: 125 DDGNLSFYCNCTEDFTGEYCQFE-NSAACVTLNP--CQNNATCVASPGEKQITCLCL 178
+ F C C +TG YC+ ++ A LN C N CV PG C CL
Sbjct: 1096 KSAH-GFTCICPRGYTGAYCEKSIDNCAEPELNSVICLNGGICVDGPGHT-FDCRCL 1150
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 42 VDHCLTDPCLGHGTCINRS--------------DRYQCLCTPRYSGNNCEKDNGDCSSNP 87
+D C + PC TCI++ D + CLC P Y G CE+D DC N
Sbjct: 682 IDECASHPCKNGATCIDQPGNYFCQCVPPFKVVDGFSCLCNPGYVGIRCEQDIDDCILNA 741
Query: 88 CLNDGVCVD----------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTE 137
C ++ C D ++G + E E +C NPC N+ C D S+ C CT
Sbjct: 742 CEHNSTCKDLHLSYQCVCLSDWEGNFCE-QESNECKMNPCKNNSTCTDLYK-SYRCECTS 799
Query: 138 DFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
+TG+ C E C + +PC N C S Q CLC
Sbjct: 800 GWTGQNCS-EEINECDS-DPCMNGGLCHESTIPGQFVCLC 837
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 41/189 (21%)
Query: 5 PISLSTLCESDINEC--------ETVKDVCNYGICV-NTNGNGN---SKVDHCLTDPCLG 52
P + CE DI++C T KD+ CV ++ GN + + C +PC
Sbjct: 723 PGYVGIRCEQDIDDCILNACEHNSTCKDLHLSYQCVCLSDWEGNFCEQESNECKMNPCKN 782
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDC 112
+ TC + Y+C CT ++G NC ++ +C S+PC+N G+C + G+
Sbjct: 783 NSTCTDLYKSYRCECTSGWTGQNCSEEINECDSDPCMNGGLCHESTIPGQ---------- 832
Query: 113 TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQ 172
F C C +TG++C + + NPC+NN+TC+A Q
Sbjct: 833 ------------------FVCLCPPLYTGQFCHQRYNLCDLLHNPCRNNSTCLALVDANQ 874
Query: 173 ITCLCLKEV 181
C+C +E
Sbjct: 875 -HCICREEF 882
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 18/136 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
V CL C +G C + + ++C+C P +SG+ CE + +CSS PC N+G CVD
Sbjct: 891 VKDCLFLSCQDYGDCEDMVNNFRCICRPGFSGSLCEIEINECSSEPCKNNGTCVDLTNRF 950
Query: 99 -------YKGRYWELPEIRDCTSNPCLND--CVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y G + EL ++ C +PCL++ CV DG + C C +TG C+ N
Sbjct: 951 FCNCEPEYHGPFCEL-DVNKCKISPCLDEENCVYRTDG---YNCLCAPGYTGINCEI-NL 1005
Query: 150 AACVTLNPCQNNATCV 165
C++ PC ++ C+
Sbjct: 1006 DECLS-EPCLHDGVCI 1020
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV------ 98
CL++PCL HG C + Y C C + C+ DC+S PC+N+G C
Sbjct: 1046 CLSNPCL-HGRCTELINEYPCSCDADGTSTQCKIKINDCTSIPCMNEGFCQKSAHGFTCI 1104
Query: 99 ----YKGRYWELPEIRDCT-----SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y G Y E I +C S CLN +CVD +F C C F+G++C+ N
Sbjct: 1105 CPRGYTGAYCE-KSIDNCAEPELNSVICLNGGICVDGPGHTFDCRCLPGFSGQFCEI-NI 1162
Query: 150 AACVTLNPCQNNATC 164
C + +PC + A C
Sbjct: 1163 NECSS-SPCLHGADC 1176
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 28/122 (22%)
Query: 67 CTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV------------------------YKGR 102
C P + G CE D +C+S+PC N C+D+ Y G
Sbjct: 669 CVPGFKGTQCEIDIDECASHPCKNGATCIDQPGNYFCQCVPPFKVVDGFSCLCNPGYVGI 728
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA 162
E +I DC N C ++ C D +LS+ C C D+ G +C+ E++ +NPC+NN+
Sbjct: 729 RCE-QDIDDCILNACEHNSTC-KDLHLSYQCVCLSDWEGNFCEQESNEC--KMNPCKNNS 784
Query: 163 TC 164
TC
Sbjct: 785 TC 786
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 25/125 (20%)
Query: 50 CLGHGTCINR--SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP 107
C GHG C++ S Y C C P +SG C++ + CS PC N+G C++ K W+
Sbjct: 183 CSGHGKCLSEAWSKTYSCHCQPPFSGKYCQELDA-CSFKPCKNNGSCIN---KRENWD-E 237
Query: 108 EIRDCTSNPCLNDCVCVD-----------DGNL------SFYCNCTEDFTGEYCQFENSA 150
+ +C +P C + GN SF C C E F+G +C+ ++
Sbjct: 238 QAYECVCHPPFTGKNCSEIIGQCQPHVCFHGNCSNITSNSFICECDEQFSGPFCEV-SAK 296
Query: 151 ACVTL 155
CV+L
Sbjct: 297 PCVSL 301
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 95 VDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154
+DE G+ E + C + C N+ C+ D N + +C C ++G+ CQF A+C
Sbjct: 2322 IDEARHGKNIENCHVPWCAHHLCRNNGTCISD-NENLFCECPRLYSGKLCQF---ASCEN 2377
Query: 155 LNPCQNNATCVASPGEKQITCLC 177
NPC N ATCV G I CLC
Sbjct: 2378 -NPCGNGATCVPKSG-TDIVCLC 2398
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 50 CLGHGTCINRSDR-YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
CL G C++ + C C P +SG CE + +CSS+PCL+ C D +
Sbjct: 1131 CLNGGICVDGPGHTFDCRCLPGFSGQFCEININECSSSPCLHGADCEDHI 1180
Score = 33.5 bits (75), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 30/111 (27%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW 104
C + C G C + C C P ++GN C + S CLN
Sbjct: 2900 CGYNTCRNGGECTVNGTTFSCRCLPDWAGNTCNQ------SVSCLN-------------- 2939
Query: 105 ELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
N CL+ +C+ D + S+ C CT + G YC+ + S +
Sbjct: 2940 ----------NLCLHQSLCIPDQSFSYSCLCTLGWVGRYCENKTSFSTAKF 2980
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 60 SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
S Y+ LC R++GN ++ D N C ++ VC DE+ + R
Sbjct: 547 SQEYRYLCFLRWAGNMYLENTTDDQENECQHEAVCKDEINRPR 589
Score = 31.2 bits (69), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE 97
N V C C +GTCI+ ++ C C YSG C+ C +NPC N CV +
Sbjct: 2333 NCHVPWCAHHLCRNNGTCISDNENLFCECPRLYSGKLCQF--ASCENNPCGNGATCVPK 2389
Score = 30.4 bits (67), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 28/62 (45%)
Query: 33 NTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDG 92
+++ NG + V PC CI S+ C+C+P ++ C+ C S P N+
Sbjct: 324 SSSQNGETDVSEFSLVPCQNGTDCIKISNDVMCICSPIFTDLLCKSIQTSCESFPLRNNA 383
Query: 93 VC 94
C
Sbjct: 384 TC 385
Score = 30.4 bits (67), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCS--SNPCLNDGVCVDEVYKGR 102
C + P + TC Y C C ++ NCEK C S CLN+ C + + + +
Sbjct: 374 CESFPLRNNATCKKCEKDYPCSCISGFTEKNCEKAIDHCKLLSINCLNEEWCFNIIGRFK 433
Query: 103 YWELPEIRDCTSNPC 117
Y +P CT NPC
Sbjct: 434 YVCIP---GCTKNPC 445
>sp|Q5IJ48|CRUM2_HUMAN Protein crumbs homolog 2 OS=Homo sapiens GN=CRB2 PE=1 SV=2
Length = 1285
Score = 72.8 bits (177), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 15/136 (11%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
+VD C + PCL G+C++ ++C+C P Y G C+ D +C S PC + G C D V
Sbjct: 146 EVDECASAPCLHGGSCLDGVGSFRCVCAPGYGGTRCQLDLDECQSQPCAHGGTCHDLVNG 205
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y+G + E E+ +C S PC ++ C+ +G SF C C ++GE C+ +
Sbjct: 206 FRCDCAGTGYEGTHCE-REVLECASAPCEHNASCL-EGLGSFRCLCWPGYSGELCEVDED 263
Query: 150 AACVTLNPCQNNATCV 165
+ PCQ+ C+
Sbjct: 264 ECASS--PCQHGGRCL 277
Score = 70.5 bits (171), Expect = 6e-12, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+D C + PC TC N +DRY+C C Y+G CE + +C+S PCL+ G C+D V
Sbjct: 109 IDECASRPCHHGATCRNLADRYECHCPLGYAGVTCEMEVDECASAPCLHGGSCLDGVGSF 168
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCT-EDFTGEYCQFENSA 150
Y G +L ++ +C S PC + C D N F C+C + G +C+ E
Sbjct: 169 RCVCAPGYGGTRCQL-DLDECQSQPCAHGGTCHDLVN-GFRCDCAGTGYEGTHCERE-VL 225
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLC 177
C + PC++NA+C+ G CLC
Sbjct: 226 ECASA-PCEHNASCLEGLG--SFRCLC 249
Score = 58.2 bits (139), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 14/132 (10%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK 100
+VD C + PCL G C + + +QC C Y+G CE+D +C S+PCL+ G C D V
Sbjct: 320 EVDECASRPCLNGGHCQDLPNGFQCHCPDGYAGPTCEEDVDECLSDPCLHGGTCSDTV-A 378
Query: 101 GRYWELPEI---RDCT---------SNPCLNDCVCV-DDGNLSFYCNCTEDFTGEYCQFE 147
G PE RDC+ + P C+ + + G S+ C+C G +C
Sbjct: 379 GYICRCPETWGGRDCSVQLTGCQGHTCPLAATCIPIFESGVHSYVCHCPPGTHGPFCGQN 438
Query: 148 NSAACVTLNPCQ 159
+ + + +P Q
Sbjct: 439 TTFSVMAGSPIQ 450
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 45 CLTDPCLGHGTCINRSDR---YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
C T PC C+ + ++C C P + G CE D +C+S PC + C +
Sbjct: 71 CATQPCHHGALCVPQGPDPTGFRCYCVPGFQGPRCELDIDECASRPCHHGATCRNLADRY 130
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
Y G E+ E+ +C S PCL+ C+ DG SF C C + G CQ +
Sbjct: 131 ECHCPLGYAGVTCEM-EVDECASAPCLHGGSCL-DGVGSFRCVCAPGYGGTRCQLDLDEC 188
Query: 152 CVTLNPCQNNATC 164
PC + TC
Sbjct: 189 --QSQPCAHGGTC 199
Score = 49.7 bits (117), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 61/166 (36%), Gaps = 33/166 (19%)
Query: 43 DHCLTDPCLGHGTCINRSDR---------------------YQCLCTPRYSGNNCEKDNG 81
D C + PC G C+ RSD + C C P + G +C +
Sbjct: 263 DECASSPCQHGGRCLQRSDPALYGGVQAAFPGAFSFRHAAGFLCHCPPGFEGADCGVEVD 322
Query: 82 DCSSNPCLNDGVCVD----------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSF 131
+C+S PCLN G C D + Y G E ++ +C S+PCL+ C D +
Sbjct: 323 ECASRPCLNGGHCQDLPNGFQCHCPDGYAGPTCE-EDVDECLSDPCLHGGTC-SDTVAGY 380
Query: 132 YCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
C C E + G C + + P + G C C
Sbjct: 381 ICRCPETWGGRDCSVQLTGCQGHTCPLAATCIPIFESGVHSYVCHC 426
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 41/143 (28%), Positives = 55/143 (38%), Gaps = 15/143 (10%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC---------- 94
C PCL G C + D + C C P + G CE C S PC G C
Sbjct: 1060 CAPSPCLHDGACRDLFDAFACACGPGWEGPRCEAHVDPCHSAPCAR-GRCHTHPDGRFEC 1118
Query: 95 -VDEVYKGRYWELP-EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
+ G LP ++C+ N D + G+ + C+C E G+ CQ
Sbjct: 1119 RCPPGFGGPRCRLPVPSKECSLNVTCLDGSPCEGGSPAANCSCLEGLAGQRCQVPTLPC- 1177
Query: 153 VTLNPCQNNATCVASPGEKQITC 175
NPC N TC A+ G + C
Sbjct: 1178 -EANPCLNGGTCRAAGGVSECIC 1199
Score = 42.0 bits (97), Expect = 0.002, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 40 SKVDHCLTDPCLGHGTCINRSD-RYQCLCTPRYSGNNCE--KDNGDCSSN-PCLNDGVCV 95
+ VD C + PC G C D R++C C P + G C + +CS N CL+ C
Sbjct: 1093 AHVDPCHSAPC-ARGRCHTHPDGRFECRCPPGFGGPRCRLPVPSKECSLNVTCLDGSPCE 1151
Query: 96 D----------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
E G+ ++P + C +NPCLN C G +S C C F+G++C+
Sbjct: 1152 GGSPAANCSCLEGLAGQRCQVPTL-PCEANPCLNGGTCRAAGGVS-ECICNARFSGQFCE 1209
Score = 35.8 bits (81), Expect = 0.17, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 83 CSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDG--NLSFYCNCTEDFT 140
C+S+PC C G E R C + PC + +CV G F C C F
Sbjct: 42 CASDPCAPGTECQATESGGYTCGPMEPRGCATQPCHHGALCVPQGPDPTGFRCYCVPGFQ 101
Query: 141 GEYCQFENSAACVTLNPCQNNATC 164
G C+ + C + PC + ATC
Sbjct: 102 GPRCELDID-ECAS-RPCHHGATC 123
Score = 35.4 bits (80), Expect = 0.18, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC 94
D C DPC GTC+ + + C C ++G C + C PCL C
Sbjct: 809 DMCSPDPCFNGGTCLVTWNDFHCTCPANFTGPTCAQQLW-CPGQPCLPPATC 859
Score = 32.7 bits (73), Expect = 1.3, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNG 81
C +PCL GTC +C+C R+SG CE G
Sbjct: 1177 CEANPCLNGGTCRAAGGVSECICNARFSGQFCEVAKG 1213
>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1
Length = 1213
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C ++PC GTCI++ + YQC+C + G +CE + DCS NPCLN G C D V
Sbjct: 627 INDCESNPCRNGGTCIDKVNVYQCICADGWEGVHCEINIDDCSLNPCLNKGACQDLVNDF 686
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
+KG+ + + C C N C D+G+ +F C C+ + G C +++
Sbjct: 687 YCECRNGWKGKTCHSRDSQ-CDEATCNNGGTCHDEGD-TFKCRCSPGWEGATCNIAKNSS 744
Query: 152 CVTLNPCQNNATCVA 166
C+ NPC+N TCV
Sbjct: 745 CLP-NPCENGGTCVV 758
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 12/105 (11%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------Y 99
CL GTC + + Y+CLC P Y+G CEKD +C+S+PCLN G C DEV +
Sbjct: 455 CLNGGTCKDLVNGYRCLCPPGYTGEQCEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGF 514
Query: 100 KGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
G+ +L +I C NPC N C + + ++C C +D+ G+ C
Sbjct: 515 SGQLCQL-DIDYCKPNPCQNGAQCFNLAS-DYFCKCPDDYEGKNC 557
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 22 VKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSD-RYQCLCTPRYSGNNCEKDN 80
V D C + N+ G V + ++ C HG C +++ ++ C C + G C ++
Sbjct: 571 VIDSCTVAVASNSTPEG---VRYISSNVCGPHGRCRSQAGGQFTCECQEGFRGTYCHENI 627
Query: 81 GDCSSNPCLNDGVCVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLS 130
DC SNPC N G C+D+V ++G + E+ I DC+ NPCLN C D N
Sbjct: 628 NDCESNPCRNGGTCIDKVNVYQCICADGWEGVHCEI-NIDDCSLNPCLNKGACQDLVN-D 685
Query: 131 FYCNCTEDFTGEYCQFENS----AACVTLNPCQNNA---TCVASPGEKQITC 175
FYC C + G+ C +S A C C + C SPG + TC
Sbjct: 686 FYCECRNGWKGKTCHSRDSQCDEATCNNGGTCHDEGDTFKCRCSPGWEGATC 737
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+ C PC+ +C N Y C C P +SG NC+ + DC CLN G C D V
Sbjct: 410 ANECEDKPCVNAKSCHNLIGAYFCECLPGWSGQNCDININDCKGQ-CLNGGTCKDLVNGY 468
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
Y G E ++ +C S+PCLN C D+ N F C C F+G+ CQ +
Sbjct: 469 RCLCPPGYTGEQCE-KDVDECASSPCLNGGRCQDEVN-GFQCLCPAGFSGQLCQLDIDY- 525
Query: 152 CVTLNPCQNNATCV 165
NPCQN A C
Sbjct: 526 -CKPNPCQNGAQCF 538
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 30/160 (18%)
Query: 11 LCESDINECETVKDVCNYGICVNT-------------NGNGNSKVDH-CLTDPCLGHGTC 56
LC+ D+N C T + N G C NT +G + +H CL++PC GTC
Sbjct: 289 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCEDGYSGVNCERAEHACLSNPCANGGTC 348
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
S Y+C C +SG +CE + DC+ N C + G C D V + G+ ++
Sbjct: 349 KETSQGYECHCAIGWSGTSCEINVDDCTPNQCKHGGTCQDLVNGFKCACPPHWTGKTCQI 408
Query: 107 PEIRDCTSNPCLNDCVCVDDGNL--SFYCNCTEDFTGEYC 144
+ +C PC+N C NL +++C C ++G+ C
Sbjct: 409 -DANECEDKPCVNAKSC---HNLIGAYFCECLPGWSGQNC 444
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
+K CL +PC GTC+ D + C+C + G+ C ++ DC+ +PC N G CVD
Sbjct: 740 AKNSSCLPNPCENGGTCVVNGDSFNCVCKEGWEGSTCTENTNDCNPHPCYNSGTCVD--- 796
Query: 100 KGRYWELPE-------------IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
G W E I +C S+PC CVD+ N + C C G CQ
Sbjct: 797 -GENWYRCECAPGFAGPDCRININECQSSPCAFGSTCVDEIN-GYRCLCPPGRIGPDCQE 854
Query: 147 ENSAACVT 154
C+
Sbjct: 855 VVGRPCIA 862
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 63/134 (47%), Gaps = 19/134 (14%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCV------ 95
D C+ P HGTC+ + +QCLC + G C+KD C ++ PCLN G C
Sbjct: 260 DKCIPHPGCVHGTCV---EPWQCLCDTNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDK 316
Query: 96 -----DEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
++ Y G E E C SNPC N C + + + C+C ++G C+ N
Sbjct: 317 YQCSCEDGYSGVNCERAE-HACLSNPCANGGTC-KETSQGYECHCAIGWSGTSCEI-NVD 373
Query: 151 ACVTLNPCQNNATC 164
C T N C++ TC
Sbjct: 374 DC-TPNQCKHGGTC 386
>sp|Q70E20|SNED1_MOUSE Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus
musculus GN=Sned1 PE=2 SV=2
Length = 1403
Score = 72.4 bits (176), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 14/145 (9%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD---- 96
+VD C + PCL G+C + YQCLC+P Y G +CE + +C + PC N G C D
Sbjct: 753 EVDECRSQPCLHGGSCQDLIADYQCLCSPGYEGVHCELETDECQAQPCRNGGSCRDLPRA 812
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
E + G + E E+ C S+PC + C +DG ++ C C E F G C+ S
Sbjct: 813 FICQCPEGFVGIHCET-EVDACASSPCQHGGRC-EDGGGAYLCVCPEGFFGYNCE-TVSD 869
Query: 151 ACVTLNPCQNNATCVASPGEKQITC 175
C + +PC + C+AS G TC
Sbjct: 870 PCFS-SPCGSRGYCLASNGSHSCTC 893
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD-CSSNPCLNDGVCVDEV----- 98
C + PC GTC D Y+C C R++G +CE D C+S PC N G C +
Sbjct: 584 CSSGPCRNGGTCKEMGDEYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKC 643
Query: 99 -----YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+ GR+ E+ C +PC+N C D G F C C +TG CQ E
Sbjct: 644 DCPPGFSGRHCEI-APSPCFRSPCMNGGTCEDLGT-DFSCYCQPGYTGHRCQAE 695
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 14/146 (9%)
Query: 30 ICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD-CSSNPC 88
+C + +S C +DPC G+C D Y C C + G +CEK CSS PC
Sbjct: 530 VCHTDHNISHSLPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPHLCSSGPC 589
Query: 89 LNDGVCV---DEV-------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTED 138
N G C DE + GR+ E+ + C S PC N C + C+C
Sbjct: 590 RNGGTCKEMGDEYRCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIG-KYKCDCPPG 648
Query: 139 FTGEYCQFENSAACVTLNPCQNNATC 164
F+G +C+ S C +PC N TC
Sbjct: 649 FSGRHCEIAPS-PCFR-SPCMNGGTC 672
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDN----GDCSSNPCLNDGVCVDE 97
VD C +DPC G+C++ Y C+C + G CE + C SNPC N G CVD
Sbjct: 388 VDECSSDPCQNGGSCVDLVGNYSCICVEPFEGPQCETGSYLVPSPCLSNPCQNGGTCVD- 446
Query: 98 VYKGRYWELPEI---RDCTSNPCLNDCVCVDDGNL----SFYCNCTEDFTGEYCQFENSA 150
+G E PE DC LNDC C + G + C C F G C+FE
Sbjct: 447 ADEGYVCECPEGFMGLDCRER-ILNDCDCRNGGRCLGANTTLCQCPPGFFGLLCEFE--- 502
Query: 151 ACVTLNPCQNNATC 164
VT PC N C
Sbjct: 503 --VTATPCNMNTQC 514
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRY------ 103
C G C S C+C Y+G CE D +CSS+PC N G CVD V G Y
Sbjct: 358 CQNGGQCQAESSSAVCVCQAGYTGATCETDVDECSSDPCQNGGSCVDLV--GNYSCICVE 415
Query: 104 -WELPE--------IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
+E P+ C SNPC N CV D + + C C E F G C+
Sbjct: 416 PFEGPQCETGSYLVPSPCLSNPCQNGGTCV-DADEGYVCECPEGFMGLDCR 465
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD 96
K D C + PC GTC + +Y+C C P +SG +CE C +PC+N G C D
Sbjct: 619 KPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSPCFRSPCMNGGTCED 674
Score = 47.4 bits (111), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 81/215 (37%), Gaps = 66/215 (30%)
Query: 14 SDINECETVKDVCNYGICVNTNGNGNSKVDHC--------LTDPCLGHGTCIN----RSD 61
+D+ E ET +V G + +V C + PCL G CI+ +
Sbjct: 234 ADMAEVETTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLRPCLNGGKCIDDCVTGNP 293
Query: 62 RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPE--- 108
Y C C ++G C D +C+S+PC N G C V +KG E +
Sbjct: 294 SYTCSCLAGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFSCQCPAGFKGPTCESAQSPC 353
Query: 109 ----------------------------------IRDCTSNPCLNDCVCVD-DGNLSFYC 133
+ +C+S+PC N CVD GN S C
Sbjct: 354 DNKVCQNGGQCQAESSSAVCVCQAGYTGATCETDVDECSSDPCQNGGSCVDLVGNYS--C 411
Query: 134 NCTEDFTGEYCQ---FENSAACVTLNPCQNNATCV 165
C E F G C+ + + C++ NPCQN TCV
Sbjct: 412 ICVEPFEGPQCETGSYLVPSPCLS-NPCQNGGTCV 445
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 14/132 (10%)
Query: 54 GTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC----------VDEVYKGRY 103
G C+ Y C+C + N C S+PC N G C + GR+
Sbjct: 518 GYCMEYGGSYLCVCHTDH--NISHSLPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRH 575
Query: 104 WELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNAT 163
E C+S PC N C + G+ + C C FTG +C+ +C + PC N T
Sbjct: 576 CEKARPHLCSSGPCRNGGTCKEMGD-EYRCTCPYRFTGRHCEIGKPDSCAS-GPCHNGGT 633
Query: 164 CVASPGEKQITC 175
C G+ + C
Sbjct: 634 CFHYIGKYKCDC 645
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV 95
++VD C + PC G C + Y C+C + G NCE + C S+PC + G C+
Sbjct: 828 TEVDACASSPCQHGGRCEDGGGAYLCVCPEGFFGYNCETVSDPCFSSPCGSRGYCL 883
Score = 30.8 bits (68), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 33 NTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
N++ + S C D C GTC+ +D + C C P + G +CE
Sbjct: 1298 NSSKDTESTPGSCSEDACQNGGTCVPGADAHSCDCRPGFKGRHCE 1342
>sp|Q9NR61|DLL4_HUMAN Delta-like protein 4 OS=Homo sapiens GN=DLL4 PE=1 SV=1
Length = 685
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 58/125 (46%), Gaps = 12/125 (9%)
Query: 34 TNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGV 93
T N KVD C ++PC G C+NR C C P ++G CE DC+ NPC + G
Sbjct: 395 TGSNCEKKVDRCTSNPCANGGQCLNRGPSRMCRCRPGFTGTYCELHVSDCARNPCAHGGT 454
Query: 94 CVD----------EVYKGRYWEL-PEIRDCTSNPCLNDCVCVDDGNL-SFYCNCTEDFTG 141
C D + GR E+ I C S+PC N C D + +F CNC F G
Sbjct: 455 CHDLENGLMCTCPAGFSGRRCEVRTSIDACASSPCFNRATCYTDLSTDTFVCNCPYGFVG 514
Query: 142 EYCQF 146
C+F
Sbjct: 515 SRCEF 519
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 63/145 (43%), Gaps = 14/145 (9%)
Query: 45 CLTDPCLGHGTCINRSD--RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
C PC G+C R+ Y C C P ++G+NCEK C+SNPC N G C++
Sbjct: 366 CADSPCFNGGSCRERNQGANYACECPPNFTGSNCEKKVDRCTSNPCANGGQCLNRGPSRM 425
Query: 99 ------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
+ G Y EL + DC NPC + C D N C C F+G C+ S
Sbjct: 426 CRCRPGFTGTYCEL-HVSDCARNPCAHGGTCHDLEN-GLMCTCPAGFSGRRCEVRTSIDA 483
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
+PC N ATC C C
Sbjct: 484 CASSPCFNRATCYTDLSTDTFVCNC 508
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 76/179 (42%), Gaps = 28/179 (15%)
Query: 11 LCESDINECETVKDVCNYGICVNTNGN--------GNSKVD------HCLTDPCLGHGTC 56
C+ D+N C N C N+ G + VD C ++PC G+C
Sbjct: 280 FCDQDLNYCTHHSPCKNGATCSNSGQRSYTCTCRPGYTGVDCELELSECDSNPCRNGGSC 339
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW-ELP-------- 107
++ D Y CLC P Y G +CE C+ +PC N G C + Y E P
Sbjct: 340 KDQEDGYHCLCPPGYYGLHCEHSTLSCADSPCFNGGSCRERNQGANYACECPPNFTGSNC 399
Query: 108 --EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATC 164
++ CTSNPC N C++ G S C C FTG YC+ S NPC + TC
Sbjct: 400 EKKVDRCTSNPCANGGQCLNRGP-SRMCRCRPGFTGTYCELHVSD--CARNPCAHGGTC 455
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVDE-----------VYK 100
HGTC S +QC C + G C++D C+ + PC N C + Y
Sbjct: 261 HGTC---STPWQCTCDEGWGGLFCDQDLNYCTHHSPCKNGATCSNSGQRSYTCTCRPGYT 317
Query: 101 GRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQN 160
G EL E+ +C SNPC N C D + ++C C + G +C E+S +PC N
Sbjct: 318 GVDCEL-ELSECDSNPCRNGGSCKDQED-GYHCLCPPGYYGLHC--EHSTLSCADSPCFN 373
Query: 161 NATC 164
+C
Sbjct: 374 GGSC 377
>sp|Q62059|CSPG2_MOUSE Versican core protein OS=Mus musculus GN=Vcan PE=1 SV=2
Length = 3357
Score = 70.1 bits (170), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C T+PCL GTC Y C C P YSG+ CE D +C SNPC N CVD R
Sbjct: 3053 DLCKTNPCLNGGTCYPTETSYVCTCAPGYSGDQCELDFDECHSNPCRNGATCVDGFNTFR 3112
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDF 139
LP C D D G F C + F
Sbjct: 3113 CLCLPSY---VGALCEQDTETCDYGWHKFQGQCYKYF 3146
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 96 DEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+E +G LP C +NPCLN C S+ C C ++G+ C+ + C +
Sbjct: 3039 EESVEGTAVYLPGPDLCKTNPCLNGGTCYPT-ETSYVCTCAPGYSGDQCELDFDE-CHS- 3095
Query: 156 NPCQNNATCVASPGEKQITCLCL 178
NPC+N ATCV G CLCL
Sbjct: 3096 NPCRNGATCV--DGFNTFRCLCL 3116
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C ++PC TC++ + ++CLC P Y G CE+D C G C R
Sbjct: 3091 DECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRR 3150
Query: 103 YWELPEIRDC 112
W+ E R+C
Sbjct: 3151 TWDAAE-REC 3159
>sp|Q9ERB4|CSPG2_RAT Versican core protein (Fragments) OS=Rattus norvegicus GN=Vcan PE=2
SV=2
Length = 2738
Score = 70.1 bits (170), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C T+PCL GTC Y C C P YSG+ CE D +C SNPC N CVD + R
Sbjct: 2433 DLCKTNPCLNGGTCYPTETSYVCTCAPGYSGDQCELDFDECHSNPCRNGATCVDGLNTFR 2492
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDF 139
LP C D D G F C + F
Sbjct: 2493 CLCLPSY---VGALCEQDTETCDYGWHKFQGQCYKYF 2526
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 96 DEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+E +G LP C +NPCLN C S+ C C ++G+ C+ + C +
Sbjct: 2419 EETVEGTAVYLPGPDLCKTNPCLNGGTCYPT-ETSYVCTCAPGYSGDQCELDFDE-CHS- 2475
Query: 156 NPCQNNATCVASPGEKQITCLCL 178
NPC+N ATCV G CLCL
Sbjct: 2476 NPCRNGATCV--DGLNTFRCLCL 2496
Score = 50.1 bits (118), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C ++PC TC++ + ++CLC P Y G CE+D C G C R
Sbjct: 2471 DECHSNPCRNGATCVDGLNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRR 2530
Query: 103 YWELPEIRDC 112
W+ E R+C
Sbjct: 2531 TWDAAE-REC 2539
>sp|Q61483|DLL1_MOUSE Delta-like protein 1 OS=Mus musculus GN=Dll1 PE=1 SV=2
Length = 722
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 76/189 (40%), Gaps = 27/189 (14%)
Query: 11 LCESDINECETVKDVCNYGICVNTN--------------GNGNSKVDHCLTDPCLGHGTC 56
C D+N C K N C NT N +VD C PC +C
Sbjct: 283 FCNQDLNYCTHHKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECAPSPCKNGASC 342
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP--------- 107
+ D + C C P + G CE C+ PC N G C D G P
Sbjct: 343 TDLEDSFSCTCPPGFYGKVCELSAMTCADGPCFNGGRCSDNPDGGYTCHCPLGFSGFNCE 402
Query: 108 -EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVA 166
++ C S+PC N CVD GN S+ C C F+G YC+ +N C + +PC N TC
Sbjct: 403 KKMDLCGSSPCSNGAKCVDLGN-SYLCRCQAGFSGRYCE-DNVDDCAS-SPCANGGTCRD 459
Query: 167 SPGEKQITC 175
S + TC
Sbjct: 460 SVNDFSCTC 468
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
K+D C + PC C++ + Y C C +SG CE + DC+S+PC N G C D V
Sbjct: 404 KMDLCGSSPCSNGAKCVDLGNSYLCRCQAGFSGRYCEDNVDDCASSPCANGGTCRDSVND 463
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y G+ P R C PC N C G + C C + + G CQF
Sbjct: 464 FSCTCPPGYTGKNCSAPVSR-CEHAPCHNGATCHQRGQ-RYMCECAQGYGGPNCQF 517
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVD----- 96
D C+ P HGTC +QC C + G C +D C+ + PC N C +
Sbjct: 254 DECIRYPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCRNGATCTNTGQGS 310
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
Y G EL E+ +C +PC N C D + SF C C F G+ C+ SA
Sbjct: 311 YTCSCRPGYTGANCEL-EVDECAPSPCKNGASCTDLED-SFSCTCPPGFYGKVCEL--SA 366
Query: 151 ACVTLNPCQNNATCVASPGEKQITCLC 177
PC N C +P + TC C
Sbjct: 367 MTCADGPCFNGGRCSDNP-DGGYTCHC 392
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 34 TNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
T N ++ V C PC TC R RY C C Y G NC+
Sbjct: 473 TGKNCSAPVSRCEHAPCHNGATCHQRGQRYMCECAQGYGGPNCQ 516
>sp|P13611|CSPG2_HUMAN Versican core protein OS=Homo sapiens GN=VCAN PE=1 SV=3
Length = 3396
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/97 (38%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C +PCL GTC Y C C P YSG+ CE D +C SNPC N CVD R
Sbjct: 3091 DRCKMNPCLNGGTCYPTETSYVCTCVPGYSGDQCELDFDECHSNPCRNGATCVDGFNTFR 3150
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDF 139
LP C D D G F C + F
Sbjct: 3151 CLCLPSY---VGALCEQDTETCDYGWHKFQGQCYKYF 3184
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 96 DEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+E +G LP C NPCLN C S+ C C ++G+ C+ + C +
Sbjct: 3077 EESVEGTAIYLPGPDRCKMNPCLNGGTCYPT-ETSYVCTCVPGYSGDQCELDFDE-CHS- 3133
Query: 156 NPCQNNATCVASPGEKQITCLCL 178
NPC+N ATCV G CLCL
Sbjct: 3134 NPCRNGATCV--DGFNTFRCLCL 3154
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C ++PC TC++ + ++CLC P Y G CE+D C G C R
Sbjct: 3129 DECHSNPCRNGATCVDGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRR 3188
Query: 103 YWELPEIRDC 112
W+ E R+C
Sbjct: 3189 TWDAAE-REC 3197
>sp|Q8NFT8|DNER_HUMAN Delta and Notch-like epidermal growth factor-related receptor
OS=Homo sapiens GN=DNER PE=1 SV=1
Length = 737
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
+D C PC HGTC + Y+CLC P Y G CE++ +C S PCLN C D V
Sbjct: 469 IDFCALSPC-AHGTCRSVGTSYKCLCDPGYHGLYCEEEYNECLSAPCLNAATCRDLVNGY 527
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
YKG + EL + C + CLN C DG L+ C C FTGE C + +
Sbjct: 528 ECVCLAEYKGTHCELYK-DPCANVSCLNGATCDSDG-LNGTCICAPGFTGEECDIDINE- 584
Query: 152 CVTLNPCQNNATCVASP 168
NPC + +C+ P
Sbjct: 585 -CDSNPCHHGGSCLDQP 600
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC-VDE 97
SK+D+C+ DPC TCI+ + C C Y G+ CE+ C+S+PC N+G C VD
Sbjct: 390 QSKIDYCILDPCRNGATCISSLSGFTCQCPEGYFGSACEEKVDPCASSPCQNNGTCYVDG 449
Query: 98 VYK----GRYWELPE----IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
V+ + P I C +PC + C G S+ C C + G YC+ E
Sbjct: 450 VHFTCNCSPGFTGPTCAQLIDFCALSPCAHG-TCRSVGT-SYKCLCDPGYHGLYCE-EEY 506
Query: 150 AACVTLNPCQNNATC 164
C++ PC N ATC
Sbjct: 507 NECLSA-PCLNAATC 520
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 41 KVDHCLTDPCLGHGTCINRSDR-----YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV 95
+ D C PC + +CI+ +++ + C+C P Y+G C+ C +PC N C+
Sbjct: 349 EYDACQRKPCQNNASCIDANEKQDGSNFTCVCLPGYTGELCQSKIDYCILDPCRNGATCI 408
Query: 96 D----------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
E Y G E ++ C S+PC N+ C DG + F CNC+ FTG C
Sbjct: 409 SSLSGFTCQCPEGYFGSACE-EKVDPCASSPCQNNGTCYVDG-VHFTCNCSPGFTGPTC 465
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK 100
+ + CL+ PCL TC + + Y+C+C Y G +CE C++ CLN C +
Sbjct: 505 EYNECLSAPCLNAATCRDLVNGYECVCLAEYKGTHCELYKDPCANVSCLNGATCDSDGLN 564
Query: 101 GRYWELP---------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
G P +I +C SNPC + C+D N + C+C + G C+
Sbjct: 565 GTCICAPGFTGEECDIDINECDSNPCHHGGSCLDQPN-GYNCHCPHGWVGANCEIH 619
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 56/131 (42%), Gaps = 20/131 (15%)
Query: 50 CLGHGTCINRSDR--YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK------- 100
C G G C + + C C +Y G CE+ + C PC N+ C+D K
Sbjct: 319 CSGKGKCTTKPSEATFSCTCEEQYVGTFCEEYDA-CQRKPCQNNASCIDANEKQDGSNFT 377
Query: 101 -----GRYWEL--PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACV 153
G EL +I C +PC N C+ + F C C E + G C+ E C
Sbjct: 378 CVCLPGYTGELCQSKIDYCILDPCRNGATCISSLS-GFTCQCPEGYFGSACE-EKVDPCA 435
Query: 154 TLNPCQNNATC 164
+ +PCQNN TC
Sbjct: 436 S-SPCQNNGTC 445
Score = 33.1 bits (74), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 130 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQ----ITCLCL 178
+F C C E + G +C E AC PCQNNA+C+ + EKQ TC+CL
Sbjct: 333 TFSCTCEEQYVGTFC--EEYDAC-QRKPCQNNASCIDA-NEKQDGSNFTCVCL 381
>sp|P81282|CSPG2_BOVIN Versican core protein OS=Bos taurus GN=VCAN PE=1 SV=2
Length = 3381
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/97 (37%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C +PCL GTC Y C C P YSG+ CE D +C SNPC N C+D R
Sbjct: 3076 DRCKMNPCLNGGTCYPTETSYVCTCVPGYSGDRCELDFDECHSNPCRNGATCIDGFNTFR 3135
Query: 103 YWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDF 139
LP C D D G F C + F
Sbjct: 3136 CLCLPSY---VGALCEQDTETCDYGWHKFQGQCYKYF 3169
Score = 52.4 bits (124), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 96 DEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTL 155
+E +G LP C NPCLN C S+ C C ++G+ C+ + C +
Sbjct: 3062 EESVEGTAVYLPGPDRCKMNPCLNGGTCYPT-ETSYVCTCVPGYSGDRCELDFDE-CHS- 3118
Query: 156 NPCQNNATCVASPGEKQITCLCL 178
NPC+N ATC+ G CLCL
Sbjct: 3119 NPCRNGATCI--DGFNTFRCLCL 3139
Score = 51.6 bits (122), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGR 102
D C ++PC TCI+ + ++CLC P Y G CE+D C G C R
Sbjct: 3114 DECHSNPCRNGATCIDGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRR 3173
Query: 103 YWELPEIRDC 112
W+ E R+C
Sbjct: 3174 TWDAAE-REC 3182
>sp|P78504|JAG1_HUMAN Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3
Length = 1218
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 75/146 (51%), Gaps = 15/146 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--- 98
++ C ++PC GTCI+ + Y+C+C+ + G CE + DCS NPC N G C D V
Sbjct: 630 INDCESNPCRNGGTCIDGVNSYKCICSDGWEGAYCETNINDCSQNPCHNGGTCRDLVNDF 689
Query: 99 -------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAA 151
+KG+ + + C C N C D+G+ +F C C + G C +++
Sbjct: 690 YCDCKNGWKGKTCHSRDSQ-CDEATCNNGGTCYDEGD-AFKCMCPGGWEGTTCNIARNSS 747
Query: 152 CVTLNPCQNNATCVASPGEKQITCLC 177
C+ NPC N TCV + GE TC+C
Sbjct: 748 CLP-NPCHNGGTCVVN-GE-SFTCVC 770
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 85/180 (47%), Gaps = 33/180 (18%)
Query: 11 LCESDINECETVKDVCNYGICVNT-------------NGNGNSKVDH-CLTDPCLGHGTC 56
LC+ D+N C T + N G C NT +G +H CL+DPC G+C
Sbjct: 292 LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSC 351
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
S ++C C+P ++G C + DCS N C + G C D V + G+ +L
Sbjct: 352 KETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQL 411
Query: 107 PEIRDCTSNPCLNDCVCVDDGNL--SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATC 164
+ +C + PC+N C NL S+YC+C + G+ C N C L CQN+A+C
Sbjct: 412 -DANECEAKPCVNAKSCK---NLIASYYCDCLPGWMGQNCDI-NINDC--LGQCQNDASC 464
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 90/220 (40%), Gaps = 51/220 (23%)
Query: 5 PISLSTLCESDINEC-------ETVKDVCNYGICVNTNGNGNSK----VDHCLTDPCLGH 53
P + C+ +IN+C + +D+ N C+ G +D C ++PCL
Sbjct: 440 PGWMGQNCDININDCLGQCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNG 499
Query: 54 GTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGR- 102
G C N +R+QCLC +SGN C+ D C NPC N C + E Y+G+
Sbjct: 500 GHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNPCQNGAQCYNRASDYFCKCPEDYEGKN 559
Query: 103 ------------------------YWELPE-IRDCTSNPCLNDCVCVDDGNLSFYCNCTE 137
+ PE +R +SN C C F C+C +
Sbjct: 560 CSHLKDHCRTTPCEVIDSCTVAMASNDTPEGVRYISSNVCGPHGKCKSQSGGKFTCDCNK 619
Query: 138 DFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
FTG YC EN C + NPC+N TC+ G C+C
Sbjct: 620 GFTGTYCH-ENINDCES-NPCRNGGTCID--GVNSYKCIC 655
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
++ CL +PC GTC+ + + C+C + G C ++ DCS +PC N G CVD
Sbjct: 743 ARNSSCLPNPCHNGGTCVVNGESFTCVCKEGWEGPICAQNTNDCSPHPCYNSGTCVD--- 799
Query: 100 KGRYWELPE-------------IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
G W E I +C S+PC CVD+ N + C C +G CQ
Sbjct: 800 -GDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEIN-GYRCVCPPGHSGAKCQE 857
Query: 147 ENSAACVTL 155
+ C+T+
Sbjct: 858 VSGRPCITM 866
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 17/114 (14%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVD----- 96
D C+ P HG C ++ +QCLC + G C+KD C ++ PCLN G C +
Sbjct: 263 DKCIPHPGCVHGIC---NEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDK 319
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
E Y G E+ E C S+PC N C + +L F C C+ +TG C
Sbjct: 320 YQCSCPEGYSGPNCEIAE-HACLSDPCHNRGSCKET-SLGFECECSPGWTGPTC 371
Score = 37.0 bits (84), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
++ C + PC TC++ + Y+C+C P +SG C+ + S PC+ G + + G
Sbjct: 821 INECQSSPCAFGATCVDEINGYRCVCPPGHSGAKCQ----EVSGRPCITMGSVIPD---G 873
Query: 102 RYWELPEIRDCTSNPCLN 119
W+ DC + CLN
Sbjct: 874 AKWD----DDCNTCQCLN 887
>sp|Q9Y219|JAG2_HUMAN Protein jagged-2 OS=Homo sapiens GN=JAG2 PE=1 SV=3
Length = 1238
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
+ +D CL PC GTCI+ D ++C C + G C+ + DC +PC + G C D V
Sbjct: 634 HENIDDCLGQPCRNGGTCIDEVDAFRCFCPSGWEGELCDTNPNDCLPDPCHSRGRCYDLV 693
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+KG+ E + C + C N C D G+ +F C C + G C
Sbjct: 694 NDFYCACDDGWKGKTCHSREFQ-CDAYTCSNGGTCYDSGD-TFRCACPPGWKGSTCAVAK 751
Query: 149 SAACVTLNPCQNNATCVASPGEKQITCLC 177
+++C+ NPC N TCV S +C+C
Sbjct: 752 NSSCLP-NPCVNGGTCVGS--GASFSCIC 777
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
+K CL +PC+ GTC+ + C+C + G C + DC+ PC N G+CVD V
Sbjct: 750 AKNSSCLPNPCVNGGTCVGSGASFSCICRDGWEGRTCTHNTNDCNPLPCYNGGICVDGVN 809
Query: 100 KGR-----YWELPEIR----DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
R + P+ R +C S+PC CVD+ N + C+C G CQ
Sbjct: 810 WFRCECAPGFAGPDCRINIDECQSSPCAYGATCVDEIN-GYRCSCPPGRAGPRCQ 863
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 30/162 (18%)
Query: 11 LCESDINECETVKDVCNYGICVNT-------------NGNGNSKVDH-CLTDPCLGHGTC 56
LC+ D+N C + N G C+N +G K +H C ++PC G+C
Sbjct: 303 LCDKDLNYCGSHHPCTNGGTCINAEPDQYRCTCPDGYSGRNCEKAEHACTSNPCANGGSC 362
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
++C C +SG C D +C+SNPC G CVD+V + G +L
Sbjct: 363 HEVPSGFECHCPSGWSGPTCALDIDECASNPCAAGGTCVDQVDGFECICPEQWVGATCQL 422
Query: 107 PEIRDCTSNPCLNDCVCVDDGNL--SFYCNCTEDFTGEYCQF 146
+ +C PCLN C NL +YC+C + G C
Sbjct: 423 -DANECEGKPCLNAFSCK---NLIGGYYCDCIPGWKGINCHI 460
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 51/181 (28%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLN----------- 90
+D C ++PC GTC+++ D ++C+C ++ G C+ D +C PCLN
Sbjct: 386 IDECASNPCAAGGTCVDQVDGFECICPEQWVGATCQLDANECEGKPCLNAFSCKNLIGGY 445
Query: 91 --------------------------DGVCVDEV----------YKGRYWELPEIRDCTS 114
G C D V + GR+ EL E +C S
Sbjct: 446 YCDCIPGWKGINCHINVNDCRGQCQHGGTCKDLVNGYQCVCPRGFGGRHCEL-ERDECAS 504
Query: 115 NPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQIT 174
+PC + +C D + F+C+C + F+G C+ + +PC+N A C G+
Sbjct: 505 SPCHSGGLCEDLAD-GFHCHCPQGFSGPLCEVD--VDLCEPSPCRNGARCYNLEGDYYCA 561
Query: 175 C 175
C
Sbjct: 562 C 562
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 31/182 (17%)
Query: 8 LSTLCESDINECETVKDVCNYGICVNTNGN-------GNSKVD-HCLTDPCLGH----GT 55
+ C+ D NECE K N C N G G ++ H + C G GT
Sbjct: 416 VGATCQLDANECEG-KPCLNAFSCKNLIGGYYCDCIPGWKGINCHINVNDCRGQCQHGGT 474
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGRYWE 105
C + + YQC+C + G +CE + +C+S+PC + G+C D + + G E
Sbjct: 475 CKDLVNGYQCVCPRGFGGRHCELERDECASSPCHSGGLCEDLADGFHCHCPQGFSGPLCE 534
Query: 106 LPEIRDCTSNPCLNDCVCVD-DGNLSFYCNCTEDFTGEYCQFEN----SAACVTLNPCQN 160
+ ++ C +PC N C + +G+ +YC C +DF G+ C AC ++ C +
Sbjct: 535 V-DVDLCEPSPCRNGARCYNLEGD--YYCACPDDFGGKNCSVPREPCPGGACRVIDGCGS 591
Query: 161 NA 162
+A
Sbjct: 592 DA 593
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 75/182 (41%), Gaps = 22/182 (12%)
Query: 19 CETVKDVCNYGICVNTNG----NGNSKVDHCLTDPCLGHGTCINR-SDRYQCLCTPRYSG 73
C ++ C G C +G G + C HG C+++ + C+C ++G
Sbjct: 571 CSVPREPCPGGACRVIDGCGSDAGPGMPGTAASGVCGPHGRCVSQPGGNFSCICDSGFTG 630
Query: 74 NNCEKDNGDCSSNPCLNDGVCVDEVYKGR-----YWELP----EIRDCTSNPCLNDCVCV 124
C ++ DC PC N G C+DEV R WE DC +PC + C
Sbjct: 631 TYCHENIDDCLGQPCRNGGTCIDEVDAFRCFCPSGWEGELCDTNPNDCLPDPCHSRGRCY 690
Query: 125 DDGNLSFYCNCTEDFTGEYC---QFE-NSAACVTLNPCQNNA---TCVASPGEKQITCLC 177
D N FYC C + + G+ C +F+ ++ C C ++ C PG K TC
Sbjct: 691 DLVN-DFYCACDDGWKGKTCHSREFQCDAYTCSNGGTCYDSGDTFRCACPPGWKGSTCAV 749
Query: 178 LK 179
K
Sbjct: 750 AK 751
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 19/135 (14%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSS-NPCLNDGVCVD----- 96
D C+ P HG+C+ + +QC C + G C+KD C S +PC N G C++
Sbjct: 274 DECVPYPGCVHGSCV---EPWQCNCETNWGGLLCDKDLNYCGSHHPCTNGGTCINAEPDQ 330
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ Y GR E E CTSNPC N C + + F C+C ++G C +
Sbjct: 331 YRCTCPDGYSGRNCEKAE-HACTSNPCANGGSCHEVPS-GFECHCPSGWSGPTCALDID- 387
Query: 151 ACVTLNPCQNNATCV 165
C + NPC TCV
Sbjct: 388 ECAS-NPCAAGGTCV 401
Score = 30.8 bits (68), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEK 78
+D C + PC TC++ + Y+C C P +G C++
Sbjct: 828 IDECQSSPCAYGATCVDEINGYRCSCPPGRAGPRCQE 864
>sp|Q80TR4|SLIT1_MOUSE Slit homolog 1 protein OS=Mus musculus GN=Slit1 PE=1 SV=2
Length = 1531
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 39 NSKVDHCLTDPCLGHGTCINRS-DRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVC-VD 96
+K D CL+ PC GTC N + Y+C C Y G +CE CSSNPC N G C
Sbjct: 923 QAKCDPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRHCEVSLDGCSSNPCGNGGTCHAQ 982
Query: 97 EVYKGRY-------WELP----EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
E + +E P + DC + C+N VCV DG ++ C C +TG C+
Sbjct: 983 EGEDAGFTCSCPSGFEGPTCGVDTDDCVKHACVNGGVCV-DGVGNYTCQCPLQYTGRACE 1041
Query: 146 FENSAACVTLNPCQNNATCVASPGEKQITCL 176
+NPCQ+ A CV +P + C+
Sbjct: 1042 QLVDFCSPDMNPCQHEAQCVGTPDGPRCECM 1072
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 66/162 (40%), Gaps = 31/162 (19%)
Query: 12 CESDINECETVKDVC-NYGICVNTNGNGN-------------SKVDHCLTD--PCLGHGT 55
C D ++C VK C N G+CV+ GN VD C D PC
Sbjct: 1002 CGVDTDDC--VKHACVNGGVCVDGVGNYTCQCPLQYTGRACEQLVDFCSPDMNPCQHEAQ 1059
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWE 105
C+ D +C C Y+G+NC ++ DC + C N CVDEV Y G+ E
Sbjct: 1060 CVGTPDGPRCECMLGYTGDNCSENQDDCKDHKCQNGAQCVDEVNSYACLCVEGYSGQLCE 1119
Query: 106 LPEI--RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
+P C C N CVD G+ C C F G C+
Sbjct: 1120 IPPAPRSSCEGTECQNGANCVDQGSRPV-CQCLPGFGGPECE 1160
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSS--NPCLNDGVCVD--- 96
D C+ C+ G C++ Y C C +Y+G CE+ CS NPC ++ CV
Sbjct: 1006 TDDCVKHACVNGGVCVDGVGNYTCQCPLQYTGRACEQLVDFCSPDMNPCQHEAQCVGTPD 1065
Query: 97 ----EVYKGRYWE--LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
E G + DC + C N CVD+ N S+ C C E ++G+ C+ +
Sbjct: 1066 GPRCECMLGYTGDNCSENQDDCKDHKCQNGAQCVDEVN-SYACLCVEGYSGQLCEIPPAP 1124
Query: 151 ACV-TLNPCQNNATCV 165
CQN A CV
Sbjct: 1125 RSSCEGTECQNGANCV 1140
>sp|Q9QYE5|JAG2_MOUSE Protein jagged-2 OS=Mus musculus GN=Jag2 PE=2 SV=2
Length = 1247
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV 98
+ +D C+ PC GTCI+ D ++C C + G C+ + DC +PC + G C D V
Sbjct: 634 HENIDDCMGQPCRNGGTCIDEVDSFRCFCPSGWEGELCDINPNDCLPDPCHSRGRCYDLV 693
Query: 99 ----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFEN 148
+KG+ E + C + C N C D G+ +F C C + G C
Sbjct: 694 NDFYCACDDGWKGKTCHSREFQ-CDAYTCSNGGTCYDSGD-TFRCACPPGWKGSTCTIAK 751
Query: 149 SAACVTLNPCQNNATCVASPGEKQITCLC 177
+++CV NPC N TCV S +C+C
Sbjct: 752 NSSCVP-NPCVNGGTCVGS--GDSFSCIC 777
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVY 99
+K C+ +PC+ GTC+ D + C+C + G C + DC+ PC N G+CVD V
Sbjct: 750 AKNSSCVPNPCVNGGTCVGSGDSFSCICRDGWEGRTCTHNTNDCNPLPCYNGGICVDGVN 809
Query: 100 KGR-----YWELPEIR----DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
R + P+ R +C S+PC CVD+ N + C+C +G CQ
Sbjct: 810 WFRCECAPGFAGPDCRINIDECQSSPCAYGATCVDEIN-GYRCSCPPGRSGPRCQ 863
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 30/162 (18%)
Query: 11 LCESDINECETVKDVCNYGICVNTN-------------GNGNSKVDH-CLTDPCLGHGTC 56
LC+ D+N C + N G C+N G + +H C ++PC G+C
Sbjct: 303 LCDKDLNYCGSHHPCVNGGTCINAEPDQYLCACPDGYLGKNCERAEHACASNPCANGGSC 362
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWEL 106
++C C ++G C D +C+SNPC G CVD+V + G +L
Sbjct: 363 HEVPSGFECHCPSGWNGPTCALDIDECASNPCAAGGTCVDQVDGFECICPEQWVGATCQL 422
Query: 107 PEIRDCTSNPCLNDCVCVDDGNL--SFYCNCTEDFTGEYCQF 146
+ +C PCLN C NL +YC+C + G CQ
Sbjct: 423 -DANECEGKPCLNAFSCK---NLIGGYYCDCLPGWKGINCQI 460
Score = 53.9 bits (128), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
+D C ++PC GTC+++ D ++C+C ++ G C+ D +C PCLN C + + G
Sbjct: 386 IDECASNPCAAGGTCVDQVDGFECICPEQWVGATCQLDANECEGKPCLNAFSCKNLI-GG 444
Query: 102 RYWE-LPEIRDCTSNPCLNDC--------VCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
Y + LP + +NDC C D N + C C F G +C+ E
Sbjct: 445 YYCDCLPGWKGINCQININDCHGQCQHGGTCKDLVN-GYQCVCPRGFGGRHCELEYDK-- 501
Query: 153 VTLNPCQNNATC 164
+PC+ C
Sbjct: 502 CASSPCRRGGIC 513
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 22/182 (12%)
Query: 19 CETVKDVCNYGICVNTNG----NGNSKVDHCLTDPCLGHGTCIN-RSDRYQCLCTPRYSG 73
C +D C G C +G G+ + C HG C++ + C+C ++G
Sbjct: 571 CSVPRDTCPGGACRVIDGCGFEAGSRARGVAPSGICGPHGHCVSLPGGNFSCICDSGFTG 630
Query: 74 NNCEKDNGDCSSNPCLNDGVCVDEV-------YKGRYWELPEI--RDCTSNPCLNDCVCV 124
C ++ DC PC N G C+DEV G EL +I DC +PC + C
Sbjct: 631 TYCHENIDDCMGQPCRNGGTCIDEVDSFRCFCPSGWEGELCDINPNDCLPDPCHSRGRCY 690
Query: 125 DDGNLSFYCNCTEDFTGEYC---QFE-NSAACVTLNPCQNNA---TCVASPGEKQITCLC 177
D N FYC C + + G+ C +F+ ++ C C ++ C PG K TC
Sbjct: 691 DLVN-DFYCACDDGWKGKTCHSREFQCDAYTCSNGGTCYDSGDTFRCACPPGWKGSTCTI 749
Query: 178 LK 179
K
Sbjct: 750 AK 751
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 18/132 (13%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------Y 99
C GTC + + YQC+C + G +CE + C+S+PC G+C D V
Sbjct: 469 CQHGGTCKDLVNGYQCVCPRGFGGRHCELEYDKCASSPCRRGGICEDLVDGFRCHCPRGL 528
Query: 100 KGRYWELPEIRDCTSNPCLNDCVCVD-DGNLSFYCNCTEDFTGEYCQFEN----SAACVT 154
G + E+ ++ C +PCLN C + +G+ +YC C EDF G+ C AC
Sbjct: 529 SGLHCEV-DMDLCEPSPCLNGARCYNLEGD--YYCACPEDFGGKNCSVPRDTCPGGACRV 585
Query: 155 LNPCQNNATCVA 166
++ C A A
Sbjct: 586 IDGCGFEAGSRA 597
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSS-NPCLNDGVCVD----- 96
D C+ P HG+C+ + + C C + G C+KD C S +PC+N G C++
Sbjct: 274 DECVPYPGCVHGSCV---EPWHCDCETNWGGLLCDKDLNYCGSHHPCVNGGTCINAEPDQ 330
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
+ Y G+ E E C SNPC N C + + F C+C + G C +
Sbjct: 331 YLCACPDGYLGKNCERAE-HACASNPCANGGSCHEVPS-GFECHCPSGWNGPTCALDIDE 388
Query: 151 ACVTLNPCQNNATCV 165
NPC TCV
Sbjct: 389 --CASNPCAAGGTCV 401
Score = 32.3 bits (72), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 9/78 (11%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKG 101
+D C + PC TC++ + Y+C C P SG C++ + PC + G+ G
Sbjct: 828 IDECQSSPCAYGATCVDEINGYRCSCPPGRSGPRCQEVV--IFTRPCWSRGM---SFPHG 882
Query: 102 RYWELPEIRDCTSNPCLN 119
W + DC S CL+
Sbjct: 883 SSW----MEDCNSCRCLD 896
>sp|O88279|SLIT1_RAT Slit homolog 1 protein OS=Rattus norvegicus GN=Slit1 PE=1 SV=1
Length = 1531
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 67/144 (46%), Gaps = 16/144 (11%)
Query: 39 NSKVDHCLTDPCLGHGTCINRS-DRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE 97
+K D CL+ PC GTC N + Y+C C Y G NCE CSSNPC N G C +
Sbjct: 923 QAKCDPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRNCEVSLDSCSSNPCGNGGTCHAQ 982
Query: 98 V-------------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144
++G + DC + C+N VCV DG ++ C C +TG C
Sbjct: 983 EGEDAGFTCSCPSGFEGLTCGM-NTDDCVKHDCVNGGVCV-DGIGNYTCQCPLQYTGRAC 1040
Query: 145 QFENSAACVTLNPCQNNATCVASP 168
+ LNPCQ+ A CV +P
Sbjct: 1041 EQLVDFCSPDLNPCQHEAQCVGTP 1064
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 60/149 (40%), Gaps = 28/149 (18%)
Query: 24 DVCNYGICVNTNGNGN-------------SKVDHCLTD--PCLGHGTCINRSDRYQCLCT 68
D N G+CV+ GN VD C D PC C+ + +C C
Sbjct: 1013 DCVNGGVCVDGIGNYTCQCPLQYTGRACEQLVDFCSPDLNPCQHEAQCVGTPEGPRCECV 1072
Query: 69 PRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKGRYWELPEI--RDCTSNP 116
P Y+G+NC K+ DC + C N CVDE+ Y G+ E+P C
Sbjct: 1073 PGYTGDNCSKNQDDCKDHQCQNGAQCVDEINSYACLCAEGYSGQLCEIPPAPRNSCEGTE 1132
Query: 117 CLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
C N CVD G+ C C F G C+
Sbjct: 1133 CQNGANCVDQGSRPV-CQCLPGFGGPECE 1160
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSS--NPCLNDGVCVDEVY 99
D C+ C+ G C++ Y C C +Y+G CE+ CS NPC ++ CV
Sbjct: 1006 TDDCVKHDCVNGGVCVDGIGNYTCQCPLQYTGRACEQLVDFCSPDLNPCQHEAQCVGTPE 1065
Query: 100 KGRYWELPEIR---------DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
R +P DC + C N CVD+ N S+ C C E ++G+ C+ +
Sbjct: 1066 GPRCECVPGYTGDNCSKNQDDCKDHQCQNGAQCVDEIN-SYACLCAEGYSGQLCEIPPAP 1124
Query: 151 --ACVTLNPCQNNATCV 165
+C CQN A CV
Sbjct: 1125 RNSCEGTE-CQNGANCV 1140
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD-CSSNPCLNDGVCVDEVYKG 101
D CL +PC C +QC+C G +CEK+ D C S PC N G C
Sbjct: 4015 DPCLPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEKERSDVCYSKPCRNGGSCQRSPDGS 4074
Query: 102 RYWEL--PEIR---------DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
Y+ L P R C NPCL+ +CV + CNCT G +C+
Sbjct: 4075 SYFCLCRPGFRGNQCESVSDSCRPNPCLHGGLCV-SLKPGYKCNCTPGRYGRHCE 4128
Score = 55.8 bits (133), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 63 YQCLCTPRYSGNNCEKDNGDCSSNPCL---------NDGVCVDEVYK-GRYWELPEIRDC 112
Y C CT +SG C + C NPC +D C+ + G++ E C
Sbjct: 3997 YSCQCTSGFSGEQCSRRQDPCLPNPCHSQVQCRRLGSDFQCMCPANRDGKHCEKERSDVC 4056
Query: 113 TSNPCLNDCVC--VDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVA-SPG 169
S PC N C DG+ S++C C F G C E+ + NPC + CV+ PG
Sbjct: 4057 YSKPCRNGGSCQRSPDGS-SYFCLCRPGFRGNQC--ESVSDSCRPNPCLHGGLCVSLKPG 4113
Query: 170 EKQITCLC 177
K C C
Sbjct: 4114 YK---CNC 4118
Score = 41.6 bits (96), Expect = 0.003, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 19 CETVKDVCNYGICVNTNGNGN---SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNN 75
C+ D +Y GN S D C +PCL G C++ Y+C CTP G +
Sbjct: 4067 CQRSPDGSSYFCLCRPGFRGNQCESVSDSCRPNPCLHGGLCVSLKPGYKCNCTPGRYGRH 4126
Query: 76 CEK 78
CE+
Sbjct: 4127 CER 4129
>sp|Q99466|NOTC4_HUMAN Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4
PE=1 SV=2
Length = 2003
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 71/153 (46%), Gaps = 19/153 (12%)
Query: 39 NSKVDHCLT-----DPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGV 93
+ +D CL PC G+C+N + CLC P Y+G+ CE D+ +C S PC
Sbjct: 430 HQDLDECLMAQQGPSPCEHGGSCLNTPGSFNCLCPPGYTGSRCEADHNECLSQPCHPGST 489
Query: 94 CVDEV----------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEY 143
C+D + +G+ E+ E +C S PCLN C D N F C C F+G
Sbjct: 490 CLDLLATFHCLCPPGLEGQLCEV-ETNECASAPCLNHADCHDLLN-GFQCICLPGFSGTR 547
Query: 144 CQFENSAACVTLNPCQNNATCVASPGEKQITCL 176
C+ E+ C + +PC N C PG CL
Sbjct: 548 CE-EDIDECRS-SPCANGGQCQDQPGAFHCKCL 578
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYK 100
+ + C + PCL H C + + +QC+C P +SG CE+D +C S+PC N G C D+
Sbjct: 513 ETNECASAPCLNHADCHDLLNGFQCICLPGFSGTRCEEDIDECRSSPCANGGQCQDQPGA 572
Query: 101 GRYWELP---------EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
LP E+ +C S+PC C+D +F+C C FTG+ C+
Sbjct: 573 FHCKCLPGFEGPRCQTEVDECLSDPCPVGASCLDLPG-AFFCLCPSGFTGQLCEV 626
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 17 NECETVKDVCNYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNC 76
C+ VC+ G T +++ C++ PC GTC + Y C C Y+G C
Sbjct: 670 GHCQRSSCVCDVGW---TGPECEAELGGCISAPCAHGGTCYPQPSGYNCTCPTGYTGPTC 726
Query: 77 EKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRD----------CTSNPCLNDCVCVDD 126
++ C S PCLN G C + G Y P C S PC N CV+
Sbjct: 727 SEEMTACHSGPCLNGGSC-NPSPGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGTCVNR 785
Query: 127 GNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
+F C C F G C+ + +C +PC+N ATC SP + CLC
Sbjct: 786 PG-TFSCLCAMGFQGPRCEGKLRPSCAD-SPCRNRATCQDSP--QGPRCLC 832
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 84/201 (41%), Gaps = 31/201 (15%)
Query: 6 ISLSTLCESDINECETVKDVC-NYGICVNTNGN----------GNSKVDH---CLTDPCL 51
+ LS+ ++ +++ V +C N G+CV++ + G+ DH C + PC
Sbjct: 881 LPLSSCQKAALSQGIDVSSLCHNGGLCVDSGPSYFCHCPPGFQGSLCQDHVNPCESRPCQ 940
Query: 52 GHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP---- 107
TC+ + Y C C P Y G NC K+ C S PC N G C + G + P
Sbjct: 941 NGATCMAQPSGYLCQCAPGYDGQNCSKELDACQSQPCHNHGTCTPKP-GGFHCACPPGFV 999
Query: 108 ------EIRDCTSNPC--LNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQ 159
++ +C PC C N +FYC C TG++C+ E PC
Sbjct: 1000 GLRCEGDVDECLDQPCHPTGTAACHSLAN-AFYCQCLPGHTGQWCEVEIDP--CHSQPCF 1056
Query: 160 NNATCVASPGEK-QITCLCLK 179
+ TC A+ G C C K
Sbjct: 1057 HGGTCEATAGSPLGFICHCPK 1077
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 75/191 (39%), Gaps = 44/191 (23%)
Query: 18 ECETVKDVC------NYGICVNTNGN--------------GNSKVDHCLTDPCLGHGTCI 57
+C+T D C N G CVN G C PC TC
Sbjct: 763 QCQTSTDYCVSAPCFNGGTCVNRPGTFSCLCAMGFQGPRCEGKLRPSCADSPCRNRATCQ 822
Query: 58 NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGRYWELP 107
+ +CLC Y+G +C+ C+ PC + C+ + + G LP
Sbjct: 823 DSPQGPRCLCPTGYTGGSCQTLMDLCAQKPCPRNSHCLQTGPSFHCLCLQGWTGPLCNLP 882
Query: 108 EIRDC----------TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNP 157
+ C S+ C N +CVD G S++C+C F G CQ ++ C + P
Sbjct: 883 -LSSCQKAALSQGIDVSSLCHNGGLCVDSGP-SYFCHCPPGFQGSLCQ-DHVNPCES-RP 938
Query: 158 CQNNATCVASP 168
CQN ATC+A P
Sbjct: 939 CQNGATCMAQP 949
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 14/140 (10%)
Query: 50 CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-------YKGR 102
C GTC N + + C+C + G +CE++ DC + C C+D V GR
Sbjct: 326 CRNGGTCQNSAGSFHCVCVSGWGGTSCEENLDDCIAATCAPGSTCIDRVGSFSCLCPPGR 385
Query: 103 YWELPEIRD-CTSNPCLNDCVC-VDDGNLSFYCNCTEDFTGEYCQF---ENSAACVTLNP 157
L + D C S PC D C + S C C ++G C E A +P
Sbjct: 386 TGLLCHLEDMCLSQPCHGDAQCSTNPLTGSTLCLCQPGYSGPTCHQDLDECLMAQQGPSP 445
Query: 158 CQNNATCVASPGEKQITCLC 177
C++ +C+ +PG CLC
Sbjct: 446 CEHGGSCLNTPGS--FNCLC 463
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP---CLNDGVCVDEV- 98
D+C++ C GTC + D Y CLC ++G +C +D +C + C N G C +
Sbjct: 278 DNCVSHQCQNGGTCQDGLDTYTCLCPETWTGWDCSEDVDECETQGPPHCRNGGTCQNSAG 337
Query: 99 ---------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
+ G E + DC + C C+D SF C C TG C E+
Sbjct: 338 SFHCVCVSGWGGTSCEE-NLDDCIAATCAPGSTCIDRVG-SFSCLCPPGRTGLLCHLED- 394
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLC 177
C++ PC +A C +P CLC
Sbjct: 395 -MCLS-QPCHGDAQCSTNPLTGSTLCLC 420
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 88/256 (34%), Gaps = 94/256 (36%)
Query: 9 STLCESDINECETVKDVCNYGICVNTNGNGNSK-------------VDHCLTDPCLGHGT 55
T CE DI+EC + N G C + G + K VD CL+DPC +
Sbjct: 545 GTRCEEDIDECRS-SPCANGGQCQDQPGAFHCKCLPGFEGPRCQTEVDECLSDPCPVGAS 603
Query: 56 CIN------------------------------------RSDRYQCLC---TP------- 69
C++ + D+ CLC +P
Sbjct: 604 CLDLPGAFFCLCPSGFTGQLCEVPLCAPNLCQPKQICKDQKDKANCLCPDGSPGCAPPED 663
Query: 70 ------------------RYSGNNCEKDNGDCSSNPCLNDGVCVDEV----------YKG 101
++G CE + G C S PC + G C + Y G
Sbjct: 664 NCTCHHGHCQRSSCVCDVGWTGPECEAELGGCISAPCAHGGTCYPQPSGYNCTCPTGYTG 723
Query: 102 RYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNN 161
E+ C S PCLN C + +YC C TG CQ ++ CV+ PC N
Sbjct: 724 PTCSE-EMTACHSGPCLNGGSC-NPSPGGYYCTCPPSHTGPQCQ-TSTDYCVSA-PCFNG 779
Query: 162 ATCVASPGEKQITCLC 177
TCV PG +CLC
Sbjct: 780 GTCVNRPGT--FSCLC 793
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 80/198 (40%), Gaps = 39/198 (19%)
Query: 12 CESDINECETVKDVCNYGI-CVNTNGNGN-------------SKVDHCLTDPCLGHGTCI 57
CE D+NEC C G C NT G+ + C C GTC
Sbjct: 191 CERDVNECFQDPGPCPKGTSCHNTLGSFQCLCPVGQEGPRCELRAGPCPPRGCSNGGTCQ 250
Query: 58 NRSDR----YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVD----------EVYKGRY 103
++ + CLC P + G +CE + +C S+ C N G C D E + G
Sbjct: 251 LMPEKDSTFHLCLCPPGFIGPDCEVNPDNCVSHQCQNGGTCQDGLDTYTCLCPETWTG-- 308
Query: 104 WELPE-IRDC-TSNP--CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQ 159
W+ E + +C T P C N C + SF+C C + G C+ EN C+ C
Sbjct: 309 WDCSEDVDECETQGPPHCRNGGTCQNSAG-SFHCVCVSGWGGTSCE-ENLDDCIAAT-CA 365
Query: 160 NNATCVASPGEKQITCLC 177
+TC+ G +CLC
Sbjct: 366 PGSTCIDRVGS--FSCLC 381
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 63/149 (42%), Gaps = 18/149 (12%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDC--SSNPCLNDGVCVDEVYK 100
D C +PC+ G C+ + QC C P + G+ CE+D +C PC C + +
Sbjct: 158 DFCSANPCVNGGVCLATYPQIQCHCPPGFEGHACERDVNECFQDPGPCPKGTSCHNTLGS 217
Query: 101 -------GRYWELPEIR--DCTSNPCLNDCVC--VDDGNLSFY-CNCTEDFTGEYCQFEN 148
G+ E+R C C N C + + + +F+ C C F G C+ N
Sbjct: 218 FQCLCPVGQEGPRCELRAGPCPPRGCSNGGTCQLMPEKDSTFHLCLCPPGFIGPDCEV-N 276
Query: 149 SAACVTLNPCQNNATCVASPGEKQITCLC 177
CV+ CQN TC G TCLC
Sbjct: 277 PDNCVSHQ-CQNGGTCQD--GLDTYTCLC 302
Score = 39.7 bits (91), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 61/149 (40%), Gaps = 18/149 (12%)
Query: 43 DHCLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCV------ 95
D C C G C I S R QC C P ++G C+ + CS+NPC+N GVC+
Sbjct: 120 DPCPPSFCSKRGRCHIQASGRPQCSCMPGWTGEQCQLRD-FCSANPCVNGGVCLATYPQI 178
Query: 96 ----DEVYKGRYWELPEIRDCTSNP--CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
++G E ++ +C +P C C + SF C C G C+ +
Sbjct: 179 QCHCPPGFEGHACER-DVNECFQDPGPCPKGTSCHNTLG-SFQCLCPVGQEGPRCELR-A 235
Query: 150 AACVTLNPCQNNATCVASPGEKQITCLCL 178
C C N TC P + LCL
Sbjct: 236 GPCPPRG-CSNGGTCQLMPEKDSTFHLCL 263
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 46/133 (34%), Gaps = 21/133 (15%)
Query: 41 KVDHCLTDPCLGHGTCINRSDR---YQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDE 97
++D C + PC GTC + + C C + G C C + C + G+C+
Sbjct: 1046 EIDPCHSQPCFHGGTCEATAGSPLGFICHCPKGFEGPTCSHRAPSCGFHHCHHGGLCLPS 1105
Query: 98 VYKGRY--------------WELPEIRDC-TSNPCLNDCVCVDD---GNLSFYCNCTEDF 139
G P + C +PCL + C + G F C+C
Sbjct: 1106 PKPGFPPRCACLSGYGGPDCLTPPAPKGCGPPSPCLYNGSCSETTGLGGPGFRCSCPHSS 1165
Query: 140 TGEYCQFENSAAC 152
G CQ + C
Sbjct: 1166 PGPRCQKPGAKGC 1178
Score = 30.0 bits (66), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 56/157 (35%), Gaps = 30/157 (19%)
Query: 46 LTDPCLGHGTCINRS-DRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV------ 98
+PC GTC++ S + C C P + G C+ + ++ C N G C +
Sbjct: 31 FPEPCANGGTCLSLSLGQGTCQCAPGFLGETCQFPDPCQNAQLCQNGGSCQALLPAPLGL 90
Query: 99 ------------------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFT 140
+ G + C + C C + C+C +T
Sbjct: 91 PSSPSPLTPSFLCTCLPGFTGERCQAKLEDPCPPSFCSKRGRCHIQASGRPQCSCMPGWT 150
Query: 141 GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC 177
GE CQ + + NPC N C+A+ QI C C
Sbjct: 151 GEQCQLRDF---CSANPCVNGGVCLAT--YPQIQCHC 182
>sp|Q9JI71|DLL4_MOUSE Delta-like protein 4 OS=Mus musculus GN=Dll4 PE=2 SV=2
Length = 686
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 74/179 (41%), Gaps = 28/179 (15%)
Query: 11 LCESDINECETVKDVCNYGICVNTNGNGNS--------------KVDHCLTDPCLGHGTC 56
C+ D+N C N C N+ G + + C ++PC G+C
Sbjct: 281 FCDQDLNYCTHHSPCKNGSTCSNSGPKGYTCTCLPGYTGEHCELGLSKCASNPCRNGGSC 340
Query: 57 INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYW-ELP-------- 107
++ + Y CLC P Y G +CE C+ +PC N G C + Y E P
Sbjct: 341 KDQENSYHCLCPPGYYGQHCEHSTLTCADSPCFNGGSCRERNQGSSYACECPPNFTGSNC 400
Query: 108 --EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATC 164
++ CTSNPC N C + G S C C FTG +C+ S +PC + TC
Sbjct: 401 EKKVDRCTSNPCANGGQCQNRGP-SRTCRCRPGFTGTHCELHISD--CARSPCAHGGTC 456
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Query: 34 TNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGV 93
T N KVD C ++PC G C NR C C P ++G +CE DC+ +PC + G
Sbjct: 396 TGSNCEKKVDRCTSNPCANGGQCQNRGPSRTCRCRPGFTGTHCELHISDCARSPCAHGGT 455
Query: 94 CVD----------EVYKGRYWELPEIRD-CTSNPCLNDCVCVDDGNL-SFYCNCTEDFTG 141
C D + GR E+ D C S PC N C + +F CNC F G
Sbjct: 456 CHDLENGPVCTCPAGFSGRRCEVRITHDACASGPCFNGATCYTGLSPNNFVCNCPYGFVG 515
Query: 142 EYCQF 146
C+F
Sbjct: 516 SRCEF 520
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Query: 45 CLTDPCLGHGTCI--NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
C PC G+C N+ Y C C P ++G+NCEK C+SNPC N G C +
Sbjct: 367 CADSPCFNGGSCRERNQGSSYACECPPNFTGSNCEKKVDRCTSNPCANGGQCQNRGPSRT 426
Query: 99 ------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAAC 152
+ G + EL I DC +PC + C D N C C F+G C+ +
Sbjct: 427 CRCRPGFTGTHCEL-HISDCARSPCAHGGTCHDLENGPV-CTCPAGFSGRRCEVRITHDA 484
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
PC N ATC C C
Sbjct: 485 CASGPCFNGATCYTGLSPNNFVCNC 509
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 53 HGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVDE-----------VYK 100
HGTC S +QC C + G C++D C+ + PC N C + Y
Sbjct: 262 HGTC---SIPWQCACDEGWGGLFCDQDLNYCTHHSPCKNGSTCSNSGPKGYTCTCLPGYT 318
Query: 101 GRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQN 160
G + EL + C SNPC N C D N S++C C + G++C E+S +PC N
Sbjct: 319 GEHCEL-GLSKCASNPCRNGGSCKDQEN-SYHCLCPPGYYGQHC--EHSTLTCADSPCFN 374
Query: 161 NATC 164
+C
Sbjct: 375 GGSC 378
>sp|O00548|DLL1_HUMAN Delta-like protein 1 OS=Homo sapiens GN=DLL1 PE=2 SV=2
Length = 723
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 74/179 (41%), Gaps = 29/179 (16%)
Query: 11 LCESDINECETVKDVCNYGICVNTNGNGNSK---------------VDHCLTDPCLGHGT 55
C D+N C K N C NT G G+ +D C PC G+
Sbjct: 284 FCNQDLNYCTHHKPCKNGATCTNT-GQGSYTCSCRPGYTGATCELGIDECDPSPCKNGGS 342
Query: 56 CINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELP-------- 107
C + + Y C C P + G CE C+ PC N G C D G P
Sbjct: 343 CTDLENSYSCTCPPGFYGKICELSAMTCADGPCFNGGRCSDSPDGGYSCRCPVGYSGFNC 402
Query: 108 --EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATC 164
+I C+S+PC N CVD G+ ++ C C F+G +C +N C + +PC N TC
Sbjct: 403 EKKIDYCSSSPCSNGAKCVDLGD-AYLCRCQAGFSGRHCD-DNVDDCAS-SPCANGGTC 458
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-- 98
K+D+C + PC C++ D Y C C +SG +C+ + DC+S+PC N G C D V
Sbjct: 405 KIDYCSSSPCSNGAKCVDLGDAYLCRCQAGFSGRHCDDNVDDCASSPCANGGTCRDGVND 464
Query: 99 --------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
Y GR P R C PC N C + G+ + C C + G CQF
Sbjct: 465 FSCTCPPGYTGRNCSAPVSR-CEHAPCHNGATCHERGH-RYVCECARGYGGPNCQF 518
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSN-PCLNDGVCVD----- 96
D C+ P HGTC +QC C + G C +D C+ + PC N C +
Sbjct: 255 DECIRYPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTGQGS 311
Query: 97 ------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150
Y G EL I +C +PC N C D N S+ C C F G+ C+ SA
Sbjct: 312 YTCSCRPGYTGATCEL-GIDECDPSPCKNGGSCTDLEN-SYSCTCPPGFYGKICEL--SA 367
Query: 151 ACVTLNPCQNNATCVASP 168
PC N C SP
Sbjct: 368 MTCADGPCFNGGRCSDSP 385
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 34 TNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGV 93
T N ++ V C PC TC R RY C C Y G NC+ + P + D
Sbjct: 474 TGRNCSAPVSRCEHAPCHNGATCHERGHRYVCECARGYGGPNCQFLLPELPPGPAVVD-- 531
Query: 94 CVDEVYKGRYWELPEIRDCTS 114
+ E +G+ P + C
Sbjct: 532 -LTEKLEGQGGPFPWVAVCAG 551
>sp|A0A1F4|EYS_DROME Protein eyes shut OS=Drosophila melanogaster GN=eys PE=1 SV=1
Length = 2176
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 76/153 (49%), Gaps = 20/153 (13%)
Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP---CLNDGVCVD-- 96
VD C+++PC G C +R++ Y C C P Y G++CE D C + C + G C++
Sbjct: 221 VDECMSNPCQNGGLCRDRTNGYICTCQPGYLGSHCELDVAVCETGTGARCQHGGECIEGP 280
Query: 97 ---------EVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
+ GR + EI +C S+PC N VCVD ++ C C +TG C+ E
Sbjct: 281 GLEFTCDCPAGWHGRICQ-EEINECASSPCQNGGVCVDK-LAAYACACPMGYTGINCE-E 337
Query: 148 NSAACVTLNPCQNNATCVASPGEKQITCLCLKE 180
C NPCQNNA C+ G TC C+ +
Sbjct: 338 EILICAD-NPCQNNALCLMEEGVP--TCYCVPD 367
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV---- 98
D C + PC GTC++ Y C C +SG+NCE++ +C SNPC N G+C D
Sbjct: 184 DECWSSPCQNGGTCVDGVAYYNCTCPEGFSGSNCEENVDECMSNPCQNGGLCRDRTNGYI 243
Query: 99 ------YKGRYWELPEIRDC---TSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS 149
Y G + EL ++ C T C + C++ L F C+C + G CQ E
Sbjct: 244 CTCQPGYLGSHCEL-DVAVCETGTGARCQHGGECIEGPGLEFTCDCPAGWHGRICQ-EEI 301
Query: 150 AACVTLNPCQNNATCV 165
C + +PCQN CV
Sbjct: 302 NECAS-SPCQNGGVCV 316
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 45 CLTDPCLGHGTCIN-RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV----- 98
CL++PC+ G CI+ + Y C C Y+G C+ + +C S+PC N G CVD V
Sbjct: 148 CLSNPCV-FGVCIDGLNSSYSCYCIDGYTGIQCQTNWDECWSSPCQNGGTCVDGVAYYNC 206
Query: 99 -----YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA-AC 152
+ G E + +C SNPC N +C D N + C C + G +C+ + +
Sbjct: 207 TCPEGFSGSNCE-ENVDECMSNPCQNGGLCRDRTN-GYICTCQPGYLGSHCELDVAVCET 264
Query: 153 VTLNPCQNNATCVASPGEKQITCLC 177
T CQ+ C+ PG + TC C
Sbjct: 265 GTGARCQHGGECIEGPG-LEFTCDC 288
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 4 KPISLSTLCESDINECETVKDV-CNYG-ICVNTNG-----------NG---NSKVDHCLT 47
+P L + CE D+ CET C +G C+ G +G +++ C +
Sbjct: 247 QPGYLGSHCELDVAVCETGTGARCQHGGECIEGPGLEFTCDCPAGWHGRICQEEINECAS 306
Query: 48 DPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV--------- 98
PC G C+++ Y C C Y+G NCE++ C+ NPC N+ +C+ E
Sbjct: 307 SPCQNGGVCVDKLAAYACACPMGYTGINCEEEILICADNPCQNNALCLMEEGVPTCYCVP 366
Query: 99 -YKGRYWELPEIRDCTSNP-CLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
Y G E + +C P C+N VC+ DG +F C+C TG C+
Sbjct: 367 DYHGEKCEF-QYDECQLGPRCMNGGVCI-DGVDTFSCSCPPLLTGMLCE 413
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.475
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,153,974
Number of Sequences: 539616
Number of extensions: 3534902
Number of successful extensions: 13510
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 437
Number of HSP's that attempted gapping in prelim test: 6485
Number of HSP's gapped (non-prelim): 3475
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)