Query psy9688
Match_columns 181
No_of_seqs 112 out of 1221
Neff 10.3
Searched_HMMs 29240
Date Fri Aug 16 17:04:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9688.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9688hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.8 6.5E-20 2.2E-24 121.6 11.4 108 40-181 3-112 (135)
2 4d90_A EGF-like repeat and dis 99.8 5.3E-19 1.8E-23 118.4 11.3 117 43-181 1-126 (143)
3 2vj3_A Neurogenic locus notch 99.8 1.9E-18 6.5E-23 114.5 10.6 111 12-154 2-126 (135)
4 1z1y_A Ookinete surface protei 99.7 1.5E-18 5.2E-23 121.1 3.7 127 47-181 10-168 (186)
5 4fbr_A Lectin, myxobacterial h 99.7 1.8E-21 6.3E-26 140.5 -14.7 168 2-181 56-262 (267)
6 1yo8_A Thrombospondin-2; EGF, 99.6 1.4E-15 4.7E-20 122.4 9.3 110 41-181 2-137 (634)
7 2bou_A EGF-like module contain 99.6 8.6E-16 2.9E-20 102.7 5.1 106 47-181 6-127 (143)
8 1dx5_I Thrombomodulin; serine 99.5 1.1E-15 3.6E-20 98.8 1.3 103 40-181 2-108 (118)
9 1z1y_A Ookinete surface protei 99.5 6E-15 2.1E-19 102.8 4.5 121 23-145 10-174 (186)
10 4d90_A EGF-like repeat and dis 99.5 1.4E-13 4.8E-18 91.8 8.5 76 41-146 51-133 (143)
11 1uzk_A Fibrillin-1; glycoprote 99.4 3.7E-15 1.3E-19 101.6 -1.8 130 41-181 2-152 (162)
12 4fbr_A Lectin, myxobacterial h 99.4 8.7E-17 3E-21 116.2 -11.4 124 48-181 38-195 (267)
13 1yo8_A Thrombospondin-2; EGF, 99.4 2.6E-12 9E-17 103.5 9.5 126 15-159 2-161 (634)
14 2w86_A Fibrillin-1, fibrillin1 99.3 7.1E-14 2.4E-18 93.7 -1.0 125 40-181 2-137 (147)
15 2vj2_A Jagged-1; signalling, p 99.3 6.9E-13 2.4E-17 90.9 3.6 49 130-181 113-162 (169)
16 1tpg_A T-plasminogen activator 99.3 2.5E-12 8.5E-17 79.0 4.5 77 62-181 1-79 (91)
17 1emn_A Fibrillin; extracellula 99.3 6.7E-12 2.3E-16 75.6 5.2 67 108-181 4-73 (82)
18 1aut_L Activated protein C; se 99.2 1.2E-11 4.1E-16 79.2 6.2 92 40-167 4-109 (114)
19 2ygq_A WIF-1, WNT inhibitory f 99.2 1.7E-11 5.7E-16 92.2 6.7 134 23-181 152-301 (324)
20 2bou_A EGF-like module contain 99.2 2.2E-11 7.6E-16 81.1 5.9 87 39-144 41-132 (143)
21 1x7a_L Coagulation factor IX, 99.2 2E-11 7E-16 81.5 5.2 76 39-145 45-125 (146)
22 1emn_A Fibrillin; extracellula 99.2 2.9E-11 1E-15 72.8 5.1 72 39-142 2-76 (82)
23 1lmj_A Fibrillin 1; EGF, calci 99.2 1.2E-11 4.2E-16 75.2 3.2 67 108-181 2-76 (86)
24 3fcs_B Integrin beta-3; beta p 99.2 3.4E-11 1.2E-15 98.2 6.7 126 44-181 436-593 (690)
25 3fcs_B Integrin beta-3; beta p 99.1 1.5E-10 5.3E-15 94.4 9.0 106 48-166 493-616 (690)
26 1x7a_L Coagulation factor IX, 99.1 4.4E-11 1.5E-15 79.8 4.0 67 108-181 47-115 (146)
27 1nfu_B Coagulation factor XA, 99.1 2.1E-11 7.2E-16 84.8 2.2 78 39-146 39-121 (195)
28 2c4f_L Coagulation factor VII 99.1 1.1E-10 3.9E-15 77.5 5.5 81 39-146 44-129 (142)
29 1z6c_A Vitamin K-dependent pro 99.1 3E-11 1E-15 73.5 2.3 77 41-153 2-84 (87)
30 2c4f_L Coagulation factor VII 99.1 1.1E-10 3.7E-15 77.6 4.4 69 108-181 46-118 (142)
31 2vh0_B Activated factor XA lig 99.1 3.9E-11 1.3E-15 79.0 2.2 78 39-146 39-121 (134)
32 2ygq_A WIF-1, WNT inhibitory f 99.1 2.3E-10 7.9E-15 86.0 6.4 114 43-181 149-269 (324)
33 1lmj_A Fibrillin 1; EGF, calci 99.0 7.3E-11 2.5E-15 71.7 2.7 69 41-142 2-79 (86)
34 1tpg_A T-plasminogen activator 99.0 2.7E-10 9.1E-15 69.9 5.2 76 2-82 5-90 (91)
35 1aut_L Activated protein C; se 99.0 2.9E-10 9.8E-15 72.7 4.8 69 108-181 5-83 (114)
36 1z6c_A Vitamin K-dependent pro 99.0 7.7E-11 2.6E-15 71.7 1.9 65 108-181 2-74 (87)
37 1nfu_B Coagulation factor XA, 99.0 6.2E-11 2.1E-15 82.5 1.1 68 108-181 41-110 (195)
38 1dx5_I Thrombomodulin; serine 99.0 2E-10 6.9E-15 73.9 3.0 90 14-142 2-111 (118)
39 3h5c_B Vitamin K-dependent pro 99.0 8.9E-10 3E-14 82.6 6.9 73 40-141 3-75 (317)
40 2vh0_B Activated factor XA lig 99.0 1.2E-10 4E-15 76.7 1.1 68 108-181 41-110 (134)
41 3h5c_B Vitamin K-dependent pro 98.9 1.4E-09 4.7E-14 81.6 6.0 68 108-181 4-73 (317)
42 2w2n_E LDL receptor, low-densi 98.9 4.7E-10 1.6E-14 70.8 2.0 54 121-181 41-97 (107)
43 3k6s_B Integrin beta-2; cell r 98.8 3.1E-09 1.1E-13 86.6 4.9 120 46-181 433-585 (687)
44 3k6s_B Integrin beta-2; cell r 98.8 2.4E-09 8.3E-14 87.3 3.6 104 49-165 483-607 (687)
45 2vj2_A Jagged-1; signalling, p 98.8 4E-09 1.4E-13 72.1 3.7 129 2-145 20-168 (169)
46 2gy5_A Angiopoietin-1 receptor 98.7 3.5E-08 1.2E-12 76.7 8.1 104 49-181 204-313 (423)
47 3p5b_L Low density lipoprotein 98.7 1.4E-08 4.9E-13 78.4 4.3 64 111-181 2-68 (400)
48 1edm_B Factor IX; epidermal gr 98.7 3E-08 1E-12 50.6 4.1 37 41-77 2-38 (39)
49 3u7u_G Neuregulin 1; signaling 98.6 2.8E-08 9.7E-13 54.5 3.6 41 40-80 6-51 (55)
50 3u7u_G Neuregulin 1; signaling 98.6 5.7E-08 1.9E-12 53.3 3.8 38 108-146 7-49 (55)
51 1n7d_A LDL receptor, low-densi 98.6 2.8E-07 9.7E-12 76.0 9.3 54 121-181 306-362 (699)
52 1egf_A Epidermal growth factor 98.5 2.8E-07 9.6E-12 50.3 5.7 41 41-81 2-47 (53)
53 2w2n_E LDL receptor, low-densi 98.5 2.3E-08 7.8E-13 63.0 1.0 57 54-142 41-100 (107)
54 1edm_B Factor IX; epidermal gr 98.5 2.1E-07 7.2E-12 47.4 4.4 37 108-145 2-38 (39)
55 3v65_B Low-density lipoprotein 98.5 2.5E-08 8.6E-13 76.7 1.2 67 108-181 2-72 (386)
56 2w86_A Fibrillin-1, fibrillin1 98.5 4.7E-09 1.6E-13 70.1 -3.1 39 101-143 101-141 (147)
57 1a3p_A Epidermal growth factor 98.4 3.1E-07 1.1E-11 48.3 4.1 37 44-80 2-43 (45)
58 3p5b_L Low density lipoprotein 98.4 1.8E-07 6.2E-12 72.3 4.3 68 43-142 1-71 (400)
59 3m0c_C LDL receptor, low-densi 98.3 6.2E-07 2.1E-11 74.9 6.1 54 121-181 324-380 (791)
60 2p28_B Integrin beta-2; hybrid 98.3 3E-07 1E-11 65.0 3.4 102 48-181 96-207 (217)
61 3v65_B Low-density lipoprotein 98.3 1.2E-07 4.2E-12 72.8 1.5 73 41-145 2-82 (386)
62 1uzk_A Fibrillin-1; glycoprote 98.3 6.4E-08 2.2E-12 65.6 -0.1 68 108-181 2-83 (162)
63 1hae_A Heregulin-alpha; growth 98.3 2.2E-07 7.4E-12 52.7 1.4 42 43-84 7-53 (63)
64 2gy5_A Angiopoietin-1 receptor 98.3 6.8E-06 2.3E-10 63.9 9.9 110 2-146 188-320 (423)
65 1egf_A Epidermal growth factor 98.3 1.9E-06 6.6E-11 46.9 5.0 38 108-146 2-44 (53)
66 2k2s_B Micronemal protein 6; m 98.2 1.2E-07 4E-12 53.2 -0.6 38 40-77 9-49 (61)
67 1n7d_A LDL receptor, low-densi 98.1 7.2E-06 2.5E-10 67.7 8.1 56 54-141 306-364 (699)
68 4aqs_A Laminin subunit beta-1; 98.1 1.3E-06 4.4E-11 69.8 3.5 71 110-181 436-518 (525)
69 1k36_A Epiregulin; EGF-like fo 98.1 1.8E-06 6.3E-11 45.5 2.8 37 41-78 2-43 (46)
70 1a3p_A Epidermal growth factor 98.1 3.3E-06 1.1E-10 44.3 3.7 30 116-146 10-41 (45)
71 2k2s_B Micronemal protein 6; m 98.1 5E-07 1.7E-11 50.6 0.5 37 108-145 10-49 (61)
72 3m0c_C LDL receptor, low-densi 98.1 5.6E-06 1.9E-10 69.2 6.6 54 55-140 325-381 (791)
73 1k36_A Epiregulin; EGF-like fo 97.9 9.9E-06 3.4E-10 42.6 3.2 38 108-146 2-43 (46)
74 1hae_A Heregulin-alpha; growth 97.8 6.8E-06 2.3E-10 46.4 1.6 43 110-153 7-53 (63)
75 2p28_B Integrin beta-2; hybrid 97.8 1.7E-05 5.7E-10 56.1 3.4 65 47-146 142-214 (217)
76 1nql_B Epidermal growth factor 97.6 2.3E-05 7.8E-10 42.5 1.9 33 47-79 11-45 (53)
77 1g1s_A P-selectin; selectin, l 97.5 2.4E-05 8.2E-10 52.6 1.5 43 41-84 118-160 (162)
78 1nql_B Epidermal growth factor 97.4 9.2E-05 3.2E-09 40.1 2.4 32 114-146 11-44 (53)
79 1ob1_C Major merozoite surface 97.3 0.00056 1.9E-08 41.6 5.7 68 114-181 9-82 (99)
80 2wg3_C Hedgehog-interacting pr 97.3 2.1E-05 7.1E-10 61.9 -1.1 64 42-146 392-455 (463)
81 2kl7_A Fibulin-4; secreted, ca 97.2 0.00029 9.8E-09 40.6 3.4 27 148-176 2-29 (71)
82 3ca7_A Protein spitz; argos, E 97.2 0.00015 5.1E-09 39.1 1.9 31 48-78 14-48 (52)
83 1klo_A Laminin; glycoprotein; 97.2 0.00036 1.2E-08 47.0 3.9 29 49-77 2-33 (162)
84 3zyj_B Netrin-G1; cell adhesio 97.1 0.00022 7.6E-09 55.0 3.0 108 50-170 299-413 (426)
85 3ca7_A Protein spitz; argos, E 97.1 0.00022 7.5E-09 38.4 1.8 31 116-146 15-48 (52)
86 2wg3_C Hedgehog-interacting pr 97.1 7.2E-05 2.5E-09 58.8 -0.1 51 116-181 398-448 (463)
87 1g1s_A P-selectin; selectin, l 97.1 0.0002 6.8E-09 48.1 2.0 42 110-154 120-161 (162)
88 1apq_A Complement protease C1R 97.0 0.00067 2.3E-08 36.5 3.5 30 148-181 3-41 (53)
89 4aqs_A Laminin subunit beta-1; 97.0 0.00039 1.3E-08 55.5 3.3 85 42-145 435-524 (525)
90 1apq_A Complement protease C1R 97.0 0.00061 2.1E-08 36.6 3.0 24 48-73 20-43 (53)
91 1n1i_A Merozoite surface prote 97.0 0.004 1.4E-07 38.1 6.7 68 111-181 12-83 (105)
92 2fd6_A Urokinase-type plasmino 96.9 0.0013 4.5E-08 42.0 4.8 32 49-80 2-36 (122)
93 3ltf_D Protein spitz; receptor 96.9 0.00036 1.2E-08 38.5 1.3 30 49-78 15-48 (58)
94 1q4g_A Prostaglandin G/H synth 96.8 0.00053 1.8E-08 55.0 2.6 38 42-79 2-41 (553)
95 2jkh_L Factor X light chain; p 96.7 0.00092 3.1E-08 36.3 2.3 30 121-153 13-46 (55)
96 2jkh_L Factor X light chain; p 96.7 0.00063 2.1E-08 37.0 1.4 38 43-83 2-45 (55)
97 3nt1_A Prostaglandin-endoperox 96.6 0.0011 3.8E-08 53.4 3.2 37 42-78 1-39 (587)
98 3ltf_D Protein spitz; receptor 96.5 0.0012 4.2E-08 36.3 1.9 31 116-146 15-48 (58)
99 3cfw_A L-selectin; EGF, cell a 96.3 0.0022 7.4E-08 43.0 2.9 41 42-83 119-159 (164)
100 1kli_L Factor VIIA; extrinsic 96.3 0.0024 8.3E-08 36.4 2.6 40 108-152 4-50 (69)
101 1g1t_A E-selectin; EGF, adhesi 96.3 0.00082 2.8E-08 44.7 0.5 39 41-79 118-156 (157)
102 2kl7_A Fibulin-4; secreted, ca 96.2 0.0035 1.2E-07 35.9 2.9 23 50-72 13-36 (71)
103 1kli_L Factor VIIA; extrinsic 96.2 0.0019 6.7E-08 36.8 1.6 41 40-83 3-50 (69)
104 1gl4_A Nidogen-1, entactin; im 96.1 0.00094 3.2E-08 48.8 0.1 41 40-81 3-47 (285)
105 3nt1_A Prostaglandin-endoperox 96.0 0.0041 1.4E-07 50.2 3.4 37 110-146 2-39 (587)
106 1gl4_A Nidogen-1, entactin; im 95.9 0.002 7E-08 47.0 1.1 41 108-151 4-48 (285)
107 1q4g_A Prostaglandin G/H synth 95.9 0.0043 1.5E-07 49.8 2.8 38 109-146 2-40 (553)
108 3cfw_A L-selectin; EGF, cell a 95.7 0.0085 2.9E-07 40.0 3.6 41 111-154 121-161 (164)
109 2fd6_A Urokinase-type plasmino 95.7 0.016 5.5E-07 36.9 4.6 36 116-153 2-41 (122)
110 1kig_L Factor XA; glycoprotein 95.2 0.0068 2.3E-07 32.2 1.2 28 122-152 11-42 (51)
111 1iox_A Betacellulin; EGF-like 95.2 0.013 4.4E-07 31.1 2.3 30 48-78 14-45 (50)
112 1xdt_R Hbegf, heparin-binding 95.2 0.0079 2.7E-07 35.0 1.6 35 42-77 37-76 (79)
113 2bz6_L Blood coagulation facto 95.0 0.014 4.7E-07 31.3 2.1 29 121-152 11-44 (53)
114 1ob1_C Major merozoite surface 94.9 0.05 1.7E-06 33.0 4.7 69 45-141 7-84 (99)
115 2bz6_L Blood coagulation facto 94.9 0.0092 3.2E-07 32.0 1.3 29 54-83 11-44 (53)
116 2rnl_A Amphiregulin; AR, color 94.9 0.037 1.2E-06 29.3 3.6 29 48-77 18-48 (50)
117 1g1t_A E-selectin; EGF, adhesi 94.9 0.0091 3.1E-07 39.5 1.5 36 110-146 120-155 (157)
118 3e50_C Protransforming growth 94.9 0.033 1.1E-06 29.4 3.3 29 48-77 14-44 (50)
119 1kig_L Factor XA; glycoprotein 94.8 0.0071 2.4E-07 32.2 0.6 28 55-83 11-42 (51)
120 1iox_A Betacellulin; EGF-like 94.6 0.021 7.1E-07 30.2 2.1 31 116-147 15-46 (50)
121 2ygo_A WIF-1, WNT inhibitory f 93.9 0.071 2.4E-06 36.4 4.2 32 43-78 149-180 (188)
122 1n1i_A Merozoite surface prote 93.9 0.25 8.5E-06 30.2 6.1 68 44-140 12-84 (105)
123 3asi_A Neurexin-1-alpha; beta- 93.9 0.054 1.8E-06 41.7 4.0 38 42-79 185-223 (410)
124 1szb_A Mannose binding lectin- 93.4 0.023 7.7E-07 38.3 1.0 40 137-181 113-156 (170)
125 3asi_A Neurexin-1-alpha; beta- 93.0 0.1 3.5E-06 40.2 4.2 38 108-146 184-222 (410)
126 1klo_A Laminin; glycoprotein; 92.9 0.068 2.3E-06 35.7 2.7 30 116-146 2-34 (162)
127 2i9a_A Urokinase-type plasmino 92.8 0.092 3.2E-06 34.4 3.3 33 49-81 14-49 (145)
128 2wph_E Coagulation factor IXA 92.5 0.2 6.8E-06 27.3 3.9 24 121-145 11-39 (59)
129 1b9w_A Protein (merozoite surf 92.1 0.88 3E-05 27.1 6.5 68 112-180 7-77 (95)
130 2wph_E Coagulation factor IXA 92.0 0.1 3.6E-06 28.5 2.4 22 156-181 7-29 (59)
131 1xdt_R Hbegf, heparin-binding 91.9 0.075 2.6E-06 30.9 1.7 31 115-146 46-77 (79)
132 2i9a_A Urokinase-type plasmino 91.7 0.21 7.1E-06 32.7 3.9 30 116-146 14-46 (145)
133 2rnl_A Amphiregulin; AR, color 91.5 0.21 7E-06 26.3 3.0 30 116-146 19-49 (50)
134 3qcw_A Neurexin-1-alpha; synap 91.2 0.14 4.8E-06 45.1 3.5 39 42-80 1017-1056(1245)
135 3e50_C Protransforming growth 91.1 0.23 7.8E-06 26.1 3.0 25 156-181 14-38 (50)
136 2ygo_A WIF-1, WNT inhibitory f 90.1 0.23 8E-06 33.8 3.0 32 110-146 149-180 (188)
137 3zyj_B Netrin-G1; cell adhesio 89.9 0.16 5.4E-06 39.3 2.3 27 48-77 371-397 (426)
138 1szb_A Mannose binding lectin- 89.7 0.17 5.8E-06 33.9 2.2 32 39-72 121-157 (170)
139 3qcw_A Neurexin-1-alpha; synap 89.3 0.25 8.5E-06 43.6 3.4 38 42-79 619-657 (1245)
140 1nzi_A Complement C1S componen 88.4 0.22 7.4E-06 32.8 1.9 30 148-181 116-147 (159)
141 1nzi_A Complement C1S componen 79.2 1.6 5.5E-05 28.5 3.1 32 39-72 114-148 (159)
142 3f1s_B Vitamin K-dependent pro 72.7 1.7 5.7E-05 31.5 1.9 29 42-72 2-33 (283)
143 2p26_A Integrin beta-2; hybrid 69.4 2.3 7.8E-05 31.0 2.0 53 117-180 198-261 (280)
144 3v64_C Agrin; beta propeller, 68.6 2.1 7.2E-05 31.9 1.7 18 55-72 13-30 (349)
145 3f1s_B Vitamin K-dependent pro 68.0 2.6 9E-05 30.4 2.1 24 121-145 15-42 (283)
146 3v64_C Agrin; beta propeller, 67.2 2.2 7.5E-05 31.8 1.6 18 122-140 13-30 (349)
147 2e26_A Reelin, reeler protein; 63.3 0.93 3.2E-05 37.4 -1.2 38 134-181 521-558 (725)
148 3t5o_A Complement component C6 62.6 7.1 0.00024 33.4 4.0 40 41-80 496-535 (913)
149 3fby_A COMP, cartilage oligome 59.3 7.6 0.00026 31.0 3.3 31 115-145 27-59 (551)
150 2e26_A Reelin, reeler protein; 53.2 5 0.00017 33.2 1.4 31 44-79 536-566 (725)
151 4a0p_A LRP6, LRP-6, low-densit 50.8 8.4 0.00029 31.4 2.4 30 148-181 264-295 (628)
152 1ijq_A LDL receptor, low-densi 50.4 16 0.00056 26.5 3.8 31 149-181 267-305 (316)
153 3sov_A LRP-6, low-density lipo 45.0 18 0.00063 26.4 3.3 30 150-181 268-298 (318)
154 4aqt_A Laminin subunit gamma-1 41.4 29 0.00099 26.4 3.9 20 59-78 268-287 (375)
155 3s94_A LRP-6, low-density lipo 39.2 13 0.00045 30.2 1.8 28 150-181 579-607 (619)
156 3t5o_A Complement component C6 35.9 41 0.0014 28.8 4.4 36 110-146 498-533 (913)
157 2ddu_A Reelin; beta-jelly-roll 35.0 7.5 0.00026 29.7 -0.2 25 47-75 195-219 (387)
158 4a0p_A LRP6, LRP-6, low-densit 32.3 31 0.0011 28.1 3.0 31 109-140 265-296 (628)
159 3sov_A LRP-6, low-density lipo 31.7 48 0.0016 24.1 3.8 19 54-72 279-299 (318)
160 3fby_A COMP, cartilage oligome 28.9 33 0.0011 27.5 2.5 31 47-77 26-59 (551)
161 3fl7_A Ephrin receptor; ATP-bi 27.0 15 0.0005 29.4 0.2 21 50-72 252-272 (536)
162 1lr7_A Follistatin, FS1; hepar 20.3 1.2E+02 0.0041 16.6 3.7 27 150-178 2-28 (74)
163 3s94_A LRP-6, low-density lipo 20.1 82 0.0028 25.5 3.4 30 150-181 273-303 (619)
164 3t3p_B Integrin beta-3; integr 20.1 74 0.0025 25.0 2.9 14 64-77 459-472 (472)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.83 E-value=6.5e-20 Score=121.58 Aligned_cols=108 Identities=36% Similarity=0.899 Sum_probs=67.6
Q ss_pred ccCcCCC--CCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCC
Q psy9688 40 SKVDHCL--TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPC 117 (181)
Q Consensus 40 ~~~~~c~--~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c 117 (181)
.++++|. ..+|.++++|++..+.|.|.|++||+|..|+.++++|...+|.+.+
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~------------------------- 57 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDA------------------------- 57 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSC-------------------------
T ss_pred cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCC-------------------------
Confidence 4677886 5788888899988888999999999998887666666555554444
Q ss_pred CCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 118 LNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 118 ~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+|++ ..+.|+|.|++||+|..|+. ++++|.. ++|.++++|+++.++ |.|.|++||
T Consensus 58 ----~C~~-~~g~~~C~C~~G~~G~~C~~-~~~~C~~-~~C~~~g~C~~~~g~--~~C~C~~G~ 112 (135)
T 2vj3_A 58 ----TCLD-QIGEFQCICMPGYEGVHCEV-NTDECAS-SPCLHNGRCLDKINE--FQCECPTGF 112 (135)
T ss_dssp ----EEEE-CSSCEEEECCTTEESSSSCE-ECCTTTT-CCSTTTCEEEECSSC--EEEECCTTE
T ss_pred ----EEeC-CCCCceeeCCCCCcCCccee-cCCcccC-CCcCCCCEeECCCCC--eEEECCCCC
Confidence 4444 44445555555555555543 3444444 445555555555444 445555544
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.80 E-value=5.3e-19 Score=118.38 Aligned_cols=117 Identities=29% Similarity=0.716 Sum_probs=92.2
Q ss_pred cCCCCCCCCCCCEEecCC--CCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCC
Q psy9688 43 DHCLTDPCLGHGTCINRS--DRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLND 120 (181)
Q Consensus 43 ~~c~~~~c~~~~~C~~~~--~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~ 120 (181)
|+|.+.||.++++|++.. +.|.|.|++||+|..|+ .+.++.... ..+. +++.|...+|.++
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~-~~~~~~~~~--------------~~c~--~~~~C~~~~C~~~ 63 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCS-SVVEVASDE--------------EEPT--SAGPCTPNPCHNG 63 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTC-SCCCCTTTT--------------TSCC--CCCTTSSCCCCTT
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCc-cCccccccc--------------cccc--cCCcCCCCCCCCC
Confidence 468889999999999865 57999999999999998 333332211 0111 5678888889999
Q ss_pred CEEe-------eCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 121 CVCV-------DDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 121 ~~C~-------~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++|+ + ..+.|+|.|++||.|..|+. ++++|.. ++|.++++|+++.++ |.|.|++||
T Consensus 64 g~C~~~~~~~~~-~~~~~~C~C~~G~~G~~C~~-~i~~C~~-~~C~~~~~C~~~~g~--~~C~C~~G~ 126 (143)
T 4d90_A 64 GTCEISEAYRGD-TFIGYVCKCPRGFNGIHCQH-NINECEV-EPCKNGGICTDLVAN--YSCECPGEF 126 (143)
T ss_dssp CEEEECCCEETT-EECCEEEECCTTEESTTSCE-ECCTTTT-CCSCTTCEEEEETTE--EEEECCTTC
T ss_pred CEecCCCccccC-CCCCeEeECcCCCcCCCccc-CCCcCCC-CCCCCCCEeECCCCC--eEeECCCCC
Confidence 9998 4 45789999999999999976 7899987 899999999999998 899999998
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.78 E-value=1.9e-18 Score=114.52 Aligned_cols=111 Identities=34% Similarity=0.890 Sum_probs=90.1
Q ss_pred CCCCcccccCCCCCC-CCceeecCCCCc------------c-ccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCC
Q psy9688 12 CESDINECETVKDVC-NYGICVNTNGNG------------N-SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77 (181)
Q Consensus 12 C~~~~~~c~~~~~~C-~~~~C~~~~~~~------------~-~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~ 77 (181)
|+ |+++|....++| .++.|+++.++| + .++++|...+|.++++|++..+.|.|.|++||+|..|+
T Consensus 2 c~-dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~ 80 (135)
T 2vj3_A 2 AQ-DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCE 80 (135)
T ss_dssp -C-CCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSC
T ss_pred Cc-ccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcce
Confidence 54 899998767899 899999998877 2 47888988999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCC
Q psy9688 78 KDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154 (181)
Q Consensus 78 ~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~ 154 (181)
.++++| ...+|.++++|++ ..+.|+|.|++||+|..|+. ++++|..
T Consensus 81 ~~~~~C-----------------------------~~~~C~~~g~C~~-~~g~~~C~C~~G~~G~~C~~-~i~~C~~ 126 (135)
T 2vj3_A 81 VNTDEC-----------------------------ASSPCLHNGRCLD-KINEFQCECPTGFTGHLCQV-DLHHILD 126 (135)
T ss_dssp EECCTT-----------------------------TTCCSTTTCEEEE-CSSCEEEECCTTEESSSSCE-ECC----
T ss_pred ecCCcc-----------------------------cCCCcCCCCEeEC-CCCCeEEECCCCCcCCccCc-cCccccC
Confidence 555544 3445666778888 78899999999999999986 7888876
No 4
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.72 E-value=1.5e-18 Score=121.06 Aligned_cols=127 Identities=21% Similarity=0.560 Sum_probs=82.5
Q ss_pred CCCCCCCCEEecCCCCeeEeCCCCCcCC---CCCCCCCCCC----CCCCCCCcEEeeCC---------------eecccc
Q psy9688 47 TDPCLGHGTCINRSDRYQCLCTPRYSGN---NCEKDNGDCS----SNPCLNDGVCVDEV---------------YKGRYW 104 (181)
Q Consensus 47 ~~~c~~~~~C~~~~~~~~C~c~~g~~g~---~c~~~~~~c~----~~~c~~~~~C~~~~---------------~~g~~c 104 (181)
+.||.+ ++|++..+.|+|.|++||+|. .|+ ++++|. ..+|.+.+.|++.. |.+..+
T Consensus 10 ~~pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~ 87 (186)
T 1z1y_A 10 DTICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-EXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXED 87 (186)
T ss_dssp TCCCBT-EEEEECSSCEEEEECTTEEEEETTEEE-ECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETT
T ss_pred CCCCCC-CEeECCCCCeEeECCCCCccCCCCccC-CCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCC
Confidence 344543 355555555555555555543 454 455554 34455545554432 222222
Q ss_pred ccCCCCCCCCCCCCCCCEEe----eCCCCceEeecCCCCcc-----CCccccCCCCCCCCCCC-CCCCEEeeCCCCcceE
Q psy9688 105 ELPEIRDCTSNPCLNDCVCV----DDGNLSFYCNCTEDFTG-----EYCQFENSAACVTLNPC-QNNATCVASPGEKQIT 174 (181)
Q Consensus 105 ~~~~~~~c~~~~c~~~~~C~----~~~~~~~~C~C~~g~~g-----~~c~~~~~~~c~~~~~C-~~~~~C~~~~g~~~~~ 174 (181)
.. .+++|...+|.++++|+ + ..++|+|.|++||+| ..|+.+++++|.. +| .++++|+++.++ |.
T Consensus 88 ~C-~~d~C~~~~C~~~g~C~~~~~~-~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~--~C~~~~~~C~n~~g~--y~ 161 (186)
T 1z1y_A 88 TC-VLDVCQYXNCGESGECIVEYLS-EIQSAGCSCAIGXVPNPEDEXXCTXTGETACQL--XCNTDNEVCXNVEGV--YX 161 (186)
T ss_dssp EE-EEGGGTTCCCCTTEEEEEEEET-TEEEEEEEECTEEEEETTTTTEEEEEECCCCCC--CCCTTTEEEEEETTE--EE
T ss_pred CC-CCCcCcCCCCCCCCEEeeCCcC-CCCCceEECCCCCcccCCCCCcceEcCCCcccc--cccccCcceecCCCC--ee
Confidence 22 24666666787778887 6 778899999999998 7787423478854 89 889999999998 89
Q ss_pred EecCCCC
Q psy9688 175 CLCLKEV 181 (181)
Q Consensus 175 C~C~~g~ 181 (181)
|.|++||
T Consensus 162 C~C~~G~ 168 (186)
T 1z1y_A 162 CQCMEGF 168 (186)
T ss_dssp EEECTTC
T ss_pred eECCCCC
Confidence 9999998
No 5
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.70 E-value=1.8e-21 Score=140.48 Aligned_cols=168 Identities=11% Similarity=0.025 Sum_probs=124.8
Q ss_pred CCCCCcccCCCCCCcccccC----CCCCC-CCceeecCCCCccccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCC
Q psy9688 2 YFKPISLSTLCESDINECET----VKDVC-NYGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNC 76 (181)
Q Consensus 2 ~C~~g~~g~~C~~~~~~c~~----~~~~C-~~~~C~~~~~~~~~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c 76 (181)
.|++||+|..|+.++++|.. ...+| +++.|+ .|..+...++|.+.||.++++|++...+|+|.|+.||+|..|
T Consensus 56 ~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~--~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~C 133 (267)
T 4fbr_A 56 EGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWV--LGARDKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVT 133 (267)
T ss_dssp SCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEE--CCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEC
T ss_pred eCCCCcccccccccccccccccCcCCCcccCCCeee--ccCccccccccCCCCCCCCCEEecCCccEEeeCCCCccccCC
Confidence 48899999999999998431 04455 555554 244466667898999999999999999999999999999999
Q ss_pred CCCCCCC------CCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCC
Q psy9688 77 EKDNGDC------SSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA 150 (181)
Q Consensus 77 ~~~~~~c------~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~ 150 (181)
+.++++| ...+|.+.+.|+ .|..|.. ...+...+|.++++|++ ...+|+|.|++||+|..|+. +++
T Consensus 134 e~~~d~C~n~~~c~s~pC~ngg~c~----~G~~c~~--~i~c~~~~c~ngg~C~d-g~~~y~C~Cp~Gf~G~~c~~-~i~ 205 (267)
T 4fbr_A 134 DGDTYSVENQWGGSAAPWHSGGVWV----LGTRGKQ--NVINVDAKSNDGGKTLS-GTMTYNGEGPIGFRGTLTSP-DTY 205 (267)
T ss_dssp CCCEEEEEEECSSTTSCCEEEEEEE----CCSSTTS--CEEEEEEECSSTTSEEE-EEEEETTSCCEEEEEEEEET-TEE
T ss_pred CCCcccccccCCcCCccccCCccee----ccccccc--ccccCCCCCCCCCEeeC-CCCCeEEeCCCCcccccccc-ccc
Confidence 9888874 445666666665 3555552 23344568999999999 88999999999999988875 444
Q ss_pred C------C---------------CC-C------CCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 151 A------C---------------VT-L------NPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 151 ~------c---------------~~-~------~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+ + .+ . .+|.++++|++...+ |.|.|+.||
T Consensus 206 ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~~s--y~CeCp~GF 262 (267)
T 4fbr_A 206 TVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTMI--YNGEGPIGF 262 (267)
T ss_dssp EEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEEEE--ETTSCCEEE
T ss_pred eeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCCcc--eeecCCCCc
Confidence 3 1 11 0 156777888876655 778888876
No 6
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.62 E-value=1.4e-15 Score=122.41 Aligned_cols=110 Identities=26% Similarity=0.702 Sum_probs=86.7
Q ss_pred cCcCCCCCCCCCCCEEecCCC-CeeE-eCCCCCcC--CCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCC
Q psy9688 41 KVDHCLTDPCLGHGTCINRSD-RYQC-LCTPRYSG--NNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNP 116 (181)
Q Consensus 41 ~~~~c~~~~c~~~~~C~~~~~-~~~C-~c~~g~~g--~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~ 116 (181)
++++|...||.++++|++..+ +|.| .|++||+| ..|+ ++++|...+ ..
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~p---------------------------~~ 53 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALVP---------------------------DI 53 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTSC---------------------------CC
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCCC---------------------------Cc
Confidence 578898899999999999875 5999 99999997 6776 666664322 11
Q ss_pred CCCCC---EEeeCCCCceEee-cCCCCccCCcc-------------ccCCCCCCC-CCCCCCCCEEeeCC----CCcceE
Q psy9688 117 CLNDC---VCVDDGNLSFYCN-CTEDFTGEYCQ-------------FENSAACVT-LNPCQNNATCVASP----GEKQIT 174 (181)
Q Consensus 117 c~~~~---~C~~~~~~~~~C~-C~~g~~g~~c~-------------~~~~~~c~~-~~~C~~~~~C~~~~----g~~~~~ 174 (181)
|..++ +|++ ..++|+|. |++||+|..++ .+++++|.. .++|.++++|+++. ++ |.
T Consensus 54 C~~gg~~~~CvN-t~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~Gs--Y~ 130 (634)
T 1yo8_A 54 CFSTSKVPRCVN-TQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPM--YK 130 (634)
T ss_dssp SCCCSSSCCEEE-CSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSS--EE
T ss_pred ccCCccccceee-ccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccc--ee
Confidence 55556 7888 88899998 99999987754 127889976 46899999999998 77 89
Q ss_pred EecCCCC
Q psy9688 175 CLCLKEV 181 (181)
Q Consensus 175 C~C~~g~ 181 (181)
|.|++||
T Consensus 131 C~C~~Gy 137 (634)
T 1yo8_A 131 CECQTGY 137 (634)
T ss_dssp EEECTTE
T ss_pred eeccCCc
Confidence 9999997
No 7
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.59 E-value=8.6e-16 Score=102.67 Aligned_cols=106 Identities=22% Similarity=0.550 Sum_probs=80.0
Q ss_pred CCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCC---CCCCCCEE
Q psy9688 47 TDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSN---PCLNDCVC 123 (181)
Q Consensus 47 ~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~---~c~~~~~C 123 (181)
+.+|.++++|++. |.|.|++||+|.. . .+ . .. +..|. ++++|... +|..+++|
T Consensus 6 ~~~C~~~~~C~~~---~~C~C~~G~~g~~-~-~~-~------~~----------~~~C~--dideC~~~~~~~C~~~~~C 61 (143)
T 2bou_A 6 ARWCPQDSSCVNA---TACRCNPGFSSFS-E-II-T------TP----------METCD--DINECATLSKVSCGKFSDC 61 (143)
T ss_dssp CTTCCTTEEESSS---SCEEECTTEECSS-S-SB-C------ST----------TCCCE--ECCGGGC----CCCTTEEE
T ss_pred cCcCCCCCEEcCC---CEEeCCCCCcCcc-c-cc-c------CC----------CCcCC--ccccccCCCCCCCCCCCEE
Confidence 4689899999864 8999999999753 1 00 0 00 11111 45666543 78888899
Q ss_pred eeCCCCceEeecCCCCccC------------CccccCCCCCCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 124 VDDGNLSFYCNCTEDFTGE------------YCQFENSAACVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 124 ~~~~~~~~~C~C~~g~~g~------------~c~~~~~~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++ ..++|+|.|++||++. .|+ ++++|.. .++|.++++|+++.++ |.|.|++||
T Consensus 62 ~n-~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~--dideC~~~~~~C~~~~~C~n~~g~--y~C~C~~Gy 127 (143)
T 2bou_A 62 WN-TEGSYDCVCSPGYEPVSGAKTFKNESENTCQ--DVDECSSGQHQCDSSTVCFNTVGS--YSCRCRPGW 127 (143)
T ss_dssp EE-CSSCEEEEECTTEEETTCCSCBSSGGGCCEE--ECCHHHHTCCCCCTTSEEEECSSC--EEEECCSSS
T ss_pred Ec-CCCCeEeECCCCcccCcCccccccCCCCCcC--CccCccCcCCCCCCCCEEECCCCC--EEeeCCCCc
Confidence 99 8899999999999876 555 7888874 4789999999999998 889999997
No 8
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.54 E-value=1.1e-15 Score=98.84 Aligned_cols=103 Identities=23% Similarity=0.627 Sum_probs=79.1
Q ss_pred ccCcCCCCCCCCCCCEEecC-CCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCC
Q psy9688 40 SKVDHCLTDPCLGHGTCINR-SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCL 118 (181)
Q Consensus 40 ~~~~~c~~~~c~~~~~C~~~-~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~ 118 (181)
.++|+|...||.+ +|++. .++|.|.|++||.|..+ ++++|. +.|...+|.
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~--~~~~C~-------------------------~~C~~~~C~ 52 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPH--EPHRCQ-------------------------MFCNQTACP 52 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETT--EEEEEE-------------------------ECCCSSEEE
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCC--CCCccc-------------------------cccCCCCCC
Confidence 3678888888974 99999 89999999999997643 222231 113333444
Q ss_pred CCCEEeeCCCCceEeecCCCCc---cCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 119 NDCVCVDDGNLSFYCNCTEDFT---GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 119 ~~~~C~~~~~~~~~C~C~~g~~---g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++|++ . +.|+|.|++||+ |..|. ++++|...++| +++|+++.++ |.|.|++||
T Consensus 53 --~~C~~-~-~~y~C~C~~Gy~~~~g~~C~--dideC~~~~~C--~~~C~n~~g~--y~C~C~~G~ 108 (118)
T 1dx5_I 53 --ADCDP-N-TQASCECPEGYILDDGFICT--DIDECENGGFC--SGVCHNLPGT--FECICGPDS 108 (118)
T ss_dssp --CEECT-T-STTCEECCTTEEEETTTEEE--ECCHHHHCSSC--SSEEEECSSS--EEEEECSSS
T ss_pred --CcccC-C-CCeEeECCCCccCCCCCccc--cccccCCCCCC--cCeEEeCCCC--EEEECCCCC
Confidence 47875 3 789999999999 88886 88998654688 6899999998 999999997
No 9
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.53 E-value=6e-15 Score=102.77 Aligned_cols=121 Identities=21% Similarity=0.490 Sum_probs=94.3
Q ss_pred CCCCCCceeecCCCCc---------------cccCcCCC----CCCCCCCCEEecCC-----CCeeEeCCCCCcCCCCCC
Q psy9688 23 KDVCNYGICVNTNGNG---------------NSKVDHCL----TDPCLGHGTCINRS-----DRYQCLCTPRYSGNNCEK 78 (181)
Q Consensus 23 ~~~C~~~~C~~~~~~~---------------~~~~~~c~----~~~c~~~~~C~~~~-----~~~~C~c~~g~~g~~c~~ 78 (181)
.++|.+++|+++.++| +.++++|. ..+|.++++|++.. +.|.|.|++||+|..++-
T Consensus 10 ~~pC~ng~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C 89 (186)
T 1z1y_A 10 DTICXNGQLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTC 89 (186)
T ss_dssp TCCCBTEEEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEE
T ss_pred CCCCCCCEeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCC
Confidence 5677345898888776 45778887 67798889999988 789999999999775443
Q ss_pred CCCCCCCCCCCCCcEEe----eCC----------eec-----cccccCCCCCCCCCCC-CCCCEEeeCCCCceEeecCCC
Q psy9688 79 DNGDCSSNPCLNDGVCV----DEV----------YKG-----RYWELPEIRDCTSNPC-LNDCVCVDDGNLSFYCNCTED 138 (181)
Q Consensus 79 ~~~~c~~~~c~~~~~C~----~~~----------~~g-----~~c~~~~~~~c~~~~c-~~~~~C~~~~~~~~~C~C~~g 138 (181)
.+++|...+|.+.+.|+ +.. |.+ ..|....+++|. .+| ..+++|++ ..++|+|.|++|
T Consensus 90 ~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~-~~C~~~~~~C~n-~~g~y~C~C~~G 167 (186)
T 1z1y_A 90 VLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ-LXCNTDNEVCXN-VEGVYXCQCMEG 167 (186)
T ss_dssp EEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC-CCCCTTTEEEEE-ETTEEEEEECTT
T ss_pred CCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc-ccccccCcceec-CCCCeeeECCCC
Confidence 46788888898888888 443 555 667632247787 489 88899999 899999999999
Q ss_pred CccCCcc
Q psy9688 139 FTGEYCQ 145 (181)
Q Consensus 139 ~~g~~c~ 145 (181)
|.|..+.
T Consensus 168 ~~g~~~~ 174 (186)
T 1z1y_A 168 FTFDXEX 174 (186)
T ss_dssp CEEETTT
T ss_pred CccCccc
Confidence 9987775
No 10
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.48 E-value=1.4e-13 Score=91.80 Aligned_cols=76 Identities=30% Similarity=0.859 Sum_probs=62.6
Q ss_pred cCcCCCCCCCCCCCEEe-------cCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCC
Q psy9688 41 KVDHCLTDPCLGHGTCI-------NRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCT 113 (181)
Q Consensus 41 ~~~~c~~~~c~~~~~C~-------~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~ 113 (181)
++++|.+.+|.++++|+ +..+.|.|.|++||.|..|+.++++| .
T Consensus 51 ~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~C-----------------------------~ 101 (143)
T 4d90_A 51 SAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINEC-----------------------------E 101 (143)
T ss_dssp CCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCTT-----------------------------T
T ss_pred cCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCcC-----------------------------C
Confidence 45778888999999999 56678999999999999997556555 3
Q ss_pred CCCCCCCCEEeeCCCCceEeecCCCCccCCccc
Q psy9688 114 SNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 114 ~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
..+|.++++|++ ..++|+|.|++||+|+.++.
T Consensus 102 ~~~C~~~~~C~~-~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 102 VEPCKNGGICTD-LVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp TCCSCTTCEEEE-ETTEEEEECCTTCBSTTSCB
T ss_pred CCCCCCCCEeEC-CCCCeEeECCCCCccCCcee
Confidence 445666778888 78899999999999999874
No 11
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.44 E-value=3.7e-15 Score=101.59 Aligned_cols=130 Identities=23% Similarity=0.585 Sum_probs=86.0
Q ss_pred cCcCCC-CCCCCCCCEEecCCCCeeEeCCCCCc----CCCCCCCCCC--CCCC--CC--CCCcEEeeCC---eecccccc
Q psy9688 41 KVDHCL-TDPCLGHGTCINRSDRYQCLCTPRYS----GNNCEKDNGD--CSSN--PC--LNDGVCVDEV---YKGRYWEL 106 (181)
Q Consensus 41 ~~~~c~-~~~c~~~~~C~~~~~~~~C~c~~g~~----g~~c~~~~~~--c~~~--~c--~~~~~C~~~~---~~g~~c~~ 106 (181)
++++|. +.+|. +++|++..++|.|.|++||+ |..|+ ++++ |... ++ ...+.|++.. +.+..|..
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C 79 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCC 79 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CEEEEEEEECHHHHHT
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeC
Confidence 678886 47886 68999999999999999998 88887 6665 6432 22 2355666543 11344443
Q ss_pred CCCCCCCCCCCCCCCEEeeCCCCceEeecCC--CCccC----CccccCCCCCCC-CCCCCCCCEEeeCCCCcceEEecCC
Q psy9688 107 PEIRDCTSNPCLNDCVCVDDGNLSFYCNCTE--DFTGE----YCQFENSAACVT-LNPCQNNATCVASPGEKQITCLCLK 179 (181)
Q Consensus 107 ~~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~--g~~g~----~c~~~~~~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~ 179 (181)
+. ......+|. .|.....+.|.|.|++ ||++. .|. +|++|.. +++|.+ ++|+++.++ |.|.|++
T Consensus 80 ~~-G~~~~~~C~---~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~--dideC~~~~~~C~~-g~C~n~~gs--y~C~C~~ 150 (162)
T 1uzk_A 80 SL-GKAWGTPCE---MCPAVNTSEYKILCPGGEGFRPNPITVILE--DIDECQELPGLCQG-GKCINTFGS--FQCRCPT 150 (162)
T ss_dssp TT-CCEETTTTE---ECCCTTSHHHHHHCTTCTTEEECTTTCCEE--ECCHHHHCGGGGBT-SEEEECSSC--EEEECCT
T ss_pred CC-CCCcCCCcc---cCCCCCCCCceeECCCCCCcccCCCCCccC--ccccccCCCCCcCC-CEeEcCCCC--EEeeCCC
Confidence 21 111122343 3543245678999987 88764 344 8999975 356975 699999999 9999999
Q ss_pred CC
Q psy9688 180 EV 181 (181)
Q Consensus 180 g~ 181 (181)
||
T Consensus 151 Gy 152 (162)
T 1uzk_A 151 GY 152 (162)
T ss_dssp TC
T ss_pred Cc
Confidence 98
No 12
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.42 E-value=8.7e-17 Score=116.16 Aligned_cols=124 Identities=11% Similarity=0.029 Sum_probs=99.3
Q ss_pred CCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCC------CCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCC
Q psy9688 48 DPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGD------CSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDC 121 (181)
Q Consensus 48 ~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~------c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~ 121 (181)
.+|.++++|++..++|+|.|++||+|..|+..+++ +...+|.++++|+ .|..|. ..++|++.||.+.+
T Consensus 38 ~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~----~G~~c~--~~~eC~s~pC~ngG 111 (267)
T 4fbr_A 38 IKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWV----LGARDK--QNIVAVSIKSNDGG 111 (267)
T ss_dssp EECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEE----CCCCSS--CCEEEEEEECSSTT
T ss_pred CCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeee----ccCccc--cccccCCCCCCCCC
Confidence 36889999999999999999999999999988888 6667777777774 466676 45688888999999
Q ss_pred EEeeCCCCceEeecCCCCccCCccccCCCC------CCC----------------------CCCCCCCCEEeeCCCCcce
Q psy9688 122 VCVDDGNLSFYCNCTEDFTGEYCQFENSAA------CVT----------------------LNPCQNNATCVASPGEKQI 173 (181)
Q Consensus 122 ~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~------c~~----------------------~~~C~~~~~C~~~~g~~~~ 173 (181)
+|++ ...+|+|.|++||+|..|+. ++++ |.. ..+|.++++|++...+ |
T Consensus 112 ~C~~-~~~sy~C~C~~Gf~G~~Ce~-~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~--y 187 (267)
T 4fbr_A 112 KTLT-GTTTYNGEGPIGFKSEVTDG-DTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMT--Y 187 (267)
T ss_dssp SEEE-EEEEETTSCCEEEEEEECCC-CEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEE--E
T ss_pred EEec-CCccEEeeCCCCccccCCCC-CcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCC--e
Confidence 9999 88899999999999888765 3332 111 0257778888877766 7
Q ss_pred EEecCCCC
Q psy9688 174 TCLCLKEV 181 (181)
Q Consensus 174 ~C~C~~g~ 181 (181)
+|.|++||
T Consensus 188 ~C~Cp~Gf 195 (267)
T 4fbr_A 188 NGEGPIGF 195 (267)
T ss_dssp TTSCCEEE
T ss_pred EEeCCCCc
Confidence 78888876
No 13
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.36 E-value=2.6e-12 Score=103.49 Aligned_cols=126 Identities=21% Similarity=0.502 Sum_probs=90.9
Q ss_pred CcccccCCCCCC-CCceeecCCCC-c---------------cccCcCCCCCC--CCCCC---EEecCCCCeeEe-CCCCC
Q psy9688 15 DINECETVKDVC-NYGICVNTNGN-G---------------NSKVDHCLTDP--CLGHG---TCINRSDRYQCL-CTPRY 71 (181)
Q Consensus 15 ~~~~c~~~~~~C-~~~~C~~~~~~-~---------------~~~~~~c~~~~--c~~~~---~C~~~~~~~~C~-c~~g~ 71 (181)
++++|. .++| .++.|+++.++ | |.++++|...+ |.+++ +|++..++|.|. |++||
T Consensus 2 DIDeC~--~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy 79 (634)
T 1yo8_A 2 DPDGCL--SNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRY 79 (634)
T ss_dssp --CGGG--GCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTE
T ss_pred cccccC--CCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCc
Confidence 788997 7889 88899988743 5 45788997777 99988 999999999998 99999
Q ss_pred cCCCCCCC-CCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCC--CCCCCCCEEeeCCC----CceEeecCCCCcc--C
Q psy9688 72 SGNNCEKD-NGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTS--NPCLNDCVCVDDGN----LSFYCNCTEDFTG--E 142 (181)
Q Consensus 72 ~g~~c~~~-~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~--~~c~~~~~C~~~~~----~~~~C~C~~g~~g--~ 142 (181)
+|..|+.. +..+ ... +..|. .+++|.. .+|..+++|++ .. ++|+|.|++||.| .
T Consensus 80 ~G~~c~g~g~~~~----~~d----------g~~C~--dideC~~~~~pC~~~~~Cvn-t~~~~~GsY~C~C~~Gy~GdG~ 142 (634)
T 1yo8_A 80 RGNQPVGVGLEAA----KTE----------KQVCE--PENPCKDKTHNCHKHAECIY-LGHFSDPMYKCECQTGYAGDGL 142 (634)
T ss_dssp EECCCEESSSHHH----HSC----------CCCEE--ECCTTTTTCCCCCTTEEEEE-CCTTCSSSEEEEECTTEEESSS
T ss_pred ccCcccccccccc----ccC----------CCccc--ccccccCCCcccccCccccc-cccccccceeeeccCCccccCc
Confidence 98876410 0000 001 12222 5677874 48988899998 77 8999999999986 7
Q ss_pred Cccc-cCCCCCCC-CCCCC
Q psy9688 143 YCQF-ENSAACVT-LNPCQ 159 (181)
Q Consensus 143 ~c~~-~~~~~c~~-~~~C~ 159 (181)
.|+. .++++|.. ...|.
T Consensus 143 ~Ce~d~DiDeC~~~~~~C~ 161 (634)
T 1yo8_A 143 ICGEDSDLDGWPNLNLVCA 161 (634)
T ss_dssp SEEECTTSSSSCSSCCTTT
T ss_pred ccccccCcccccCCCCccc
Confidence 8863 26778864 34565
No 14
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.33 E-value=7.1e-14 Score=93.73 Aligned_cols=125 Identities=22% Similarity=0.535 Sum_probs=77.3
Q ss_pred ccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCC-----
Q psy9688 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTS----- 114 (181)
Q Consensus 40 ~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~----- 114 (181)
.++|+|...||.+ ++|++..++|.|.|++||+|..+.. .|... ....|... +.+..|.. .++.|..
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~---~C~~~---~~~~C~~~-~~g~~C~~-~~~~c~~~~~C~ 72 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKT---ICIET---IKGTCWQT-VIDGRCEI-NINGATLKSQCC 72 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSS---BEEEC---CCEEEEEE-EETTEEEE-EEEEEECHHHHH
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCC---eecCC---CCCcccCC-CCCCcccc-CCCccccCCccc
Confidence 4688998889975 7999999999999999999754321 11100 01122211 12223321 1222210
Q ss_pred --CCCCCCCEEeeCCCCceEeecCCCCc---cCCccccCCCCCCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 115 --NPCLNDCVCVDDGNLSFYCNCTEDFT---GEYCQFENSAACVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 115 --~~c~~~~~C~~~~~~~~~C~C~~g~~---g~~c~~~~~~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
........|.. -.|.|.|++||+ |..|+ +|++|.. +++|.+ ++|+++.++ |.|.|++||
T Consensus 73 ~~~g~~~g~~C~~---c~~~C~C~~Gy~~~~g~~C~--dideC~~~~~~C~~-g~C~n~~g~--y~C~C~~Gy 137 (147)
T 2w86_A 73 SSLGAAWGSPCTL---CQVDPICGKGYSRIKGTQCE--DIDECEVFPGVCKN-GLCVNTRGS--FKCQCPSGM 137 (147)
T ss_dssp TTTCSEETTTTEE---CCCCTTTCTTEEEEETTEEE--ECCHHHHSTTCSSS-SEEEEETTE--EEEECCTTC
T ss_pred cCcCcccCCCccc---CCCcccCCCccccCCCCccC--ccccccCCCCCCCC-CEEECCCCC--EEeeCCCCC
Confidence 00000011111 126789999995 88897 8999975 356985 599999998 999999998
No 15
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.32 E-value=6.9e-13 Score=90.87 Aligned_cols=49 Identities=29% Similarity=0.774 Sum_probs=41.8
Q ss_pred ceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEeeC-CCCcceEEecCCCC
Q psy9688 130 SFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVAS-PGEKQITCLCLKEV 181 (181)
Q Consensus 130 ~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~~-~g~~~~~C~C~~g~ 181 (181)
.++|.|.+||+|..|+. ++++|...++|.++++|+++ +++ |.|.|++||
T Consensus 113 ~~~C~C~~G~~G~~C~~-~~~~C~~~~~C~~~g~C~~~~~~~--~~C~C~~G~ 162 (169)
T 2vj2_A 113 PWQCLCETNWGGQLCDK-DLNYCGTHQPCLNGGTCSNTGPDK--YQCSCPEGY 162 (169)
T ss_dssp TTCCEECTTEETTTTCE-ESCHHHHTCCCCTTCEEEECSTTC--EEEECCTTC
T ss_pred CCEEeCCCCCCCCcccC-CCCCCCCCCCCCCCCEEcCCCCCC--cEeECCCCC
Confidence 57899999999999976 67888643689999999986 777 889999998
No 16
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.29 E-value=2.5e-12 Score=79.02 Aligned_cols=77 Identities=21% Similarity=0.467 Sum_probs=59.5
Q ss_pred CeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCCCCceEeecCCCCcc
Q psy9688 62 RYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTG 141 (181)
Q Consensus 62 ~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g 141 (181)
+|.|.|.+||+|..|+ +++|. ..| |++ ..+.|+|.|++||+
T Consensus 1 sy~C~C~~g~~g~~c~--~~~c~-----------------------------~~p------C~n-~~~~y~C~C~~G~~- 41 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQ--QHQSW-----------------------------LRP------VLR-SNRVEYCWCNSGRA- 41 (91)
T ss_dssp CCCCCCBCSSSCCBCC--SSCEE-----------------------------EEE------CSS-SSCEEEEECSSSCC-
T ss_pred CeeeECCCCCcCCeEC--CCccc-----------------------------CCc------ccc-CCCCcEeECCCCCc-
Confidence 4789999999998773 33332 222 333 56789999999997
Q ss_pred CCccccCCCCCCCCCCCCCCCEEeeCC--CCcceEEecCCCC
Q psy9688 142 EYCQFENSAACVTLNPCQNNATCVASP--GEKQITCLCLKEV 181 (181)
Q Consensus 142 ~~c~~~~~~~c~~~~~C~~~~~C~~~~--g~~~~~C~C~~g~ 181 (181)
.|+..++++|.. ++|.++++|+++. ++ |.|.|++||
T Consensus 42 -~C~~~~~~~C~~-~pC~ngg~C~~~~~~~~--~~C~C~~G~ 79 (91)
T 1tpg_A 42 -QCHSVPVKSCSE-PRCFNGGTCQQALYFSD--FVCQCPEGF 79 (91)
T ss_dssp -BCCEECEEECSS-CCSCTTCEEEEESSSSC--EEEECCTTC
T ss_pred -ccccCcCCcccC-CCCCCCCEeecCCCCCC--eEeECCCCC
Confidence 776226788987 8999999999887 66 899999997
No 17
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.26 E-value=6.7e-12 Score=75.62 Aligned_cols=67 Identities=27% Similarity=0.774 Sum_probs=56.9
Q ss_pred CCCCCCC-CCCCCCCEEeeCCCCceEeecCCCCc--cCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 108 EIRDCTS-NPCLNDCVCVDDGNLSFYCNCTEDFT--GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 108 ~~~~c~~-~~c~~~~~C~~~~~~~~~C~C~~g~~--g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++++|.. .+|.+ ++|++ ..++|+|.|++||. |..|. ++++|...++|.+ ++|+++.++ |.|.|++||
T Consensus 4 dideC~~~~~C~~-g~C~n-~~g~y~C~C~~Gy~~~g~~C~--dideC~~~~~C~~-~~C~n~~g~--y~C~C~~G~ 73 (82)
T 1emn_A 4 DMDECKEPDVCKH-GQCIN-TDGSYRCECPFGYILAGNECV--DTDECSVGNPCGN-GTCKNVIGG--FECTCEEGF 73 (82)
T ss_dssp CCCSSSSTTSCSS-SEECC-CSSCCCEECCTTEEEETTEEE--ECCGGGTCCTTSS-SCEEECSSS--EEECCSSSS
T ss_pred ccccCCCCCCcCC-CEEEe-cCCCEEEECCCCeECCCCccC--CcccccCCCCCCC-CEeECCCCC--EEeECCCCe
Confidence 5677775 67864 89998 88999999999997 88896 8999974378976 599999998 899999997
No 18
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.25 E-value=1.2e-11 Score=79.21 Aligned_cols=92 Identities=25% Similarity=0.664 Sum_probs=60.2
Q ss_pred ccCcCCCCCC--------CCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCC
Q psy9688 40 SKVDHCLTDP--------CLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRD 111 (181)
Q Consensus 40 ~~~~~c~~~~--------c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~ 111 (181)
.|+++|...| |.++++|++..+.|.|.|++||+|..|+..++ +++
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~---------------------------~~~ 56 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVS---------------------------FLN 56 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECC---------------------------SSS
T ss_pred eecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCc---------------------------CCc
Confidence 4567777777 88999999999999999999999999873321 122
Q ss_pred CCCC--CCCCCCEEeeCCCCceEeecCCCCc----cCCccccCCCCCCCCCCCCCCCEEeeC
Q psy9688 112 CTSN--PCLNDCVCVDDGNLSFYCNCTEDFT----GEYCQFENSAACVTLNPCQNNATCVAS 167 (181)
Q Consensus 112 c~~~--~c~~~~~C~~~~~~~~~C~C~~g~~----g~~c~~~~~~~c~~~~~C~~~~~C~~~ 167 (181)
|... .|.. +|++ ..++|+|.|++||+ +..|. ++. . .+|..++.|+..
T Consensus 57 C~~~~~~C~~--~C~n-~~g~y~C~C~~G~~~~~~g~~C~--~~~---~-~pC~~~~~~i~~ 109 (114)
T 1aut_L 57 CSLDNGGCTH--YCLE-EVGWRRCSCAPGYKLGDDLLQCH--PAV---K-FPCGRPWKRMEK 109 (114)
T ss_dssp SSSGGGGCSS--EEEE-CSSSEEEECCTTEEECTTSSCEE--ECS---S-SCTTCCC-----
T ss_pred CcCCCCCCCC--EeEC-CCCCEEeECCCCeeECCCCCccC--cCc---c-cCCCCCCccCCC
Confidence 2221 2332 8988 88999999999998 45554 221 2 467777777643
No 19
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.22 E-value=1.7e-11 Score=92.17 Aligned_cols=134 Identities=28% Similarity=0.777 Sum_probs=50.8
Q ss_pred CCCC-CCceeecCC-----CCc---cccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcE
Q psy9688 23 KDVC-NYGICVNTN-----GNG---NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGV 93 (181)
Q Consensus 23 ~~~C-~~~~C~~~~-----~~~---~~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~ 93 (181)
+.+| +++.|++.. .+| ..+.+.|. .+|.++++|+. .+.|.|.+||+|..|+. +.|. .+|.+++.
T Consensus 152 ~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~ 224 (324)
T 2ygq_A 152 PGGCRNGGFCNERRICECPDGFHGPHCEKALCT-PRCMNGGLCVT---PGFCICPPGFYGVNCDK--ANCS-TTCFNGGT 224 (324)
T ss_dssp SSCCCSSCEECTTSCEECCTTEESSSSCEESSS-SCCCTTCEECS---SCCEECCTTCBTTTTCB--CCCS-SCCCSSCC
T ss_pred CCCCCCCCEECCCCeEECCCCCcCCCCCCCCCC-CCCCCCCEEcC---CCEEeCCCCccCCCccc--CcCC-CCCCCCCe
Confidence 3578 888887532 122 12234564 47888999975 46899999999999974 3353 56777777
Q ss_pred EeeCC-------eeccccccCCCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEee
Q psy9688 94 CVDEV-------YKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVA 166 (181)
Q Consensus 94 C~~~~-------~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~ 166 (181)
|.... |.|..|.. +.|. .+|.++++|+. .++|.|.+||.|..|+ ++.|. .+|.++++|++
T Consensus 225 C~~~~~C~C~~G~~G~~C~~---~~C~-~~C~~~g~C~~----~~~C~C~~G~~G~~C~---~~~C~--~~C~~~g~C~~ 291 (324)
T 2ygq_A 225 CFYPGKCICPPGLEGEQCEI---SKCP-QPCRNGGKCIG----KSKCKCSKGYQGDLCS---KPVCE--PGCGAHGTCHE 291 (324)
T ss_dssp BSCSSCBCCCTTCCTTTTC-------------------------------------------------------------
T ss_pred eCCCCeeeCCCCccCCCCCc---CcCC-CcCCCCCEECC----CCEEECCCCCcCCCCc---CCCCC--CCCCCCCEECC
Confidence 76532 67777752 4554 57888889864 3689999999999996 35564 47888999986
Q ss_pred CCCCcceEEecCCCC
Q psy9688 167 SPGEKQITCLCLKEV 181 (181)
Q Consensus 167 ~~g~~~~~C~C~~g~ 181 (181)
. +.|.|++||
T Consensus 292 ~-----~~C~C~~G~ 301 (324)
T 2ygq_A 292 P-----NKCQCQEGW 301 (324)
T ss_dssp ---------------
T ss_pred C-----CEeECCCCC
Confidence 2 569999987
No 20
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.20 E-value=2.2e-11 Score=81.10 Aligned_cols=87 Identities=22% Similarity=0.553 Sum_probs=65.4
Q ss_pred cccCcCCCCC---CCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCC-
Q psy9688 39 NSKVDHCLTD---PCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTS- 114 (181)
Q Consensus 39 ~~~~~~c~~~---~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~- 114 (181)
+.++++|... +|.++++|++..+.|.|.|++||+|..++..+.. ..+..|. ++++|..
T Consensus 41 C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~----------------~~~~~C~--dideC~~~ 102 (143)
T 2bou_A 41 CDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN----------------ESENTCQ--DVDECSSG 102 (143)
T ss_dssp CEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSS----------------GGGCCEE--ECCHHHHT
T ss_pred CCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcccccc----------------CCCCCcC--CccCccCc
Confidence 4577888664 7988899999999999999999998766422110 0122233 5677763
Q ss_pred -CCCCCCCEEeeCCCCceEeecCCCCccCCc
Q psy9688 115 -NPCLNDCVCVDDGNLSFYCNCTEDFTGEYC 144 (181)
Q Consensus 115 -~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c 144 (181)
.+|..+++|++ ..++|+|.|++||.+...
T Consensus 103 ~~~C~~~~~C~n-~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 103 QHQCDSSTVCFN-TVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp CCCCCTTSEEEE-CSSCEEEECCSSSCBCTT
T ss_pred CCCCCCCCEEEC-CCCCEEeeCCCCcccCCC
Confidence 68988899999 899999999999987654
No 21
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.19 E-value=2e-11 Score=81.45 Aligned_cols=76 Identities=28% Similarity=0.812 Sum_probs=57.8
Q ss_pred cccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCC
Q psy9688 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCL 118 (181)
Q Consensus 39 ~~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~ 118 (181)
+.++++|.+.||.++++|++..+.|.|.|++||+|..|+ ++++|...+ .+|.
T Consensus 45 c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~---------------------------~~C~ 96 (146)
T 1x7a_L 45 YVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKN---------------------------GRCK 96 (146)
T ss_dssp -----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGG---------------------------GSCS
T ss_pred CCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCC---------------------------CCCc
Confidence 678899999999999999999999999999999999997 456664211 1233
Q ss_pred CCCEE-eeCCCCceEeecCCCCc----cCCcc
Q psy9688 119 NDCVC-VDDGNLSFYCNCTEDFT----GEYCQ 145 (181)
Q Consensus 119 ~~~~C-~~~~~~~~~C~C~~g~~----g~~c~ 145 (181)
. +| ++ ..++|+|.|++||. |..|.
T Consensus 97 ~--~C~~n-~~g~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 97 Q--FCKTG-ADSKVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp S--BCCCC-SSSCCCCBCCTTEEECTTSSSEE
T ss_pred C--CCCCC-CCCCEEeEcCCCcEeCCCCCcCC
Confidence 2 67 66 78899999999998 78887
No 22
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.18 E-value=2.9e-11 Score=72.77 Aligned_cols=72 Identities=39% Similarity=0.847 Sum_probs=55.4
Q ss_pred cccCcCCCC-CCCCCCCEEecCCCCeeEeCCCCCc--CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCC
Q psy9688 39 NSKVDHCLT-DPCLGHGTCINRSDRYQCLCTPRYS--GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSN 115 (181)
Q Consensus 39 ~~~~~~c~~-~~c~~~~~C~~~~~~~~C~c~~g~~--g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~ 115 (181)
+.++++|.. .+|.+ ++|++..++|.|.|++||. |..|+ ++++|.. ..
T Consensus 2 C~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~----------------------------~~ 51 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDECSV----------------------------GN 51 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCGGGT----------------------------CC
T ss_pred CCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccC-CcccccC----------------------------CC
Confidence 356788874 78875 8999999999999999997 77775 5554421 33
Q ss_pred CCCCCCEEeeCCCCceEeecCCCCccC
Q psy9688 116 PCLNDCVCVDDGNLSFYCNCTEDFTGE 142 (181)
Q Consensus 116 ~c~~~~~C~~~~~~~~~C~C~~g~~g~ 142 (181)
+|.+ ++|++ ..++|+|.|++||.+.
T Consensus 52 ~C~~-~~C~n-~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 52 PCGN-GTCKN-VIGGFECTCEEGFEPG 76 (82)
T ss_dssp TTSS-SCEEE-CSSSEEECCSSSSCCC
T ss_pred CCCC-CEeEC-CCCCEEeECCCCeEeC
Confidence 5554 58888 8899999999999865
No 23
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.17 E-value=1.2e-11 Score=75.16 Aligned_cols=67 Identities=25% Similarity=0.660 Sum_probs=54.2
Q ss_pred CCCCCCCCC--CCCCCEEeeCCCCceEeecCCCCc-----cCCccccCCCCCCC-CCCCCCCCEEeeCCCCcceEEecCC
Q psy9688 108 EIRDCTSNP--CLNDCVCVDDGNLSFYCNCTEDFT-----GEYCQFENSAACVT-LNPCQNNATCVASPGEKQITCLCLK 179 (181)
Q Consensus 108 ~~~~c~~~~--c~~~~~C~~~~~~~~~C~C~~g~~-----g~~c~~~~~~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~ 179 (181)
++++|...+ |.+ ++|++ ..++|+|.|++||. |..|. ++++|.. +..|. +++|+++.|+ |.|.|++
T Consensus 2 dideC~~~~~~C~~-g~C~n-~~g~y~C~C~~Gy~~~~~~g~~C~--dideC~~~~~~C~-~~~C~n~~g~--y~C~C~~ 74 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVN-TPGDFECKCDEGYESGFMMMKNCM--DIDECQRDPLLCR-GGVCHNTEGS--YRCECPP 74 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEE-ETTEEEECCCSSEEECTTTSSSEE--ECCHHHHCSSTTT-TSEEEEETTE--EEEESCT
T ss_pred ccccccCCCCCCCC-CEEEC-CCCCEEeeCCCCcCccCCCCCccC--CcccccCCCCcCC-CCEeEcCCCC--EEEECcC
Confidence 466776554 754 58999 89999999999997 67786 8899976 23475 5799999998 8999999
Q ss_pred CC
Q psy9688 180 EV 181 (181)
Q Consensus 180 g~ 181 (181)
||
T Consensus 75 G~ 76 (86)
T 1lmj_A 75 GH 76 (86)
T ss_dssp TS
T ss_pred Cc
Confidence 97
No 24
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.17 E-value=3.4e-11 Score=98.22 Aligned_cols=126 Identities=26% Similarity=0.668 Sum_probs=79.0
Q ss_pred CCCCCCCCCCCEEecCCCCee---EeCCCCCcCCCCCCCC--------CCCCC----CCCCCCcEEee----------CC
Q psy9688 44 HCLTDPCLGHGTCINRSDRYQ---CLCTPRYSGNNCEKDN--------GDCSS----NPCLNDGVCVD----------EV 98 (181)
Q Consensus 44 ~c~~~~c~~~~~C~~~~~~~~---C~c~~g~~g~~c~~~~--------~~c~~----~~c~~~~~C~~----------~~ 98 (181)
+|...+|.+.+.|.+..+.+. |.|.+||+|..|+..+ ++|.. .+|.+++.|.. ..
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~g~C~C~~~~~~G 515 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGK 515 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECSSSEEECCCSSCC
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEECCeeEeecCCCCC
Confidence 355566666667765555555 7888888888886544 45653 23666665542 22
Q ss_pred eeccccccCCCCCCCC---CCCCCCCEEeeCCCCceEeecCCCCccCCccc-cCCCCCCC--CCCCCCCCEEeeCCCCcc
Q psy9688 99 YKGRYWELPEIRDCTS---NPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF-ENSAACVT--LNPCQNNATCVASPGEKQ 172 (181)
Q Consensus 99 ~~g~~c~~~~~~~c~~---~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~-~~~~~c~~--~~~C~~~~~C~~~~g~~~ 172 (181)
|.|..|+. ++..|.. .+|.++++|.. +.|.|.+||+|..|+. .+++.|.. ..+|.++|+|+. +
T Consensus 516 y~G~~Ce~-~~~~C~~~~~~~C~~~G~C~~-----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~--g--- 584 (690)
T 3fcs_B 516 ITGKYCEC-DDFSCVRYKGEMCSGHGQCSC-----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC--G--- 584 (690)
T ss_dssp CBSTTSCB-CSSCCCBSSSSBGGGSEEEET-----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET--T---
T ss_pred eeCCCcCc-ccCcCcCCCCCCCCCCCEecC-----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC--C---
Confidence 66777764 4556654 36777777753 5688888888887762 14566653 145777788864 2
Q ss_pred eEEec-CCCC
Q psy9688 173 ITCLC-LKEV 181 (181)
Q Consensus 173 ~~C~C-~~g~ 181 (181)
.|.| ++||
T Consensus 585 -~C~C~~~Gy 593 (690)
T 3fcs_B 585 -SCVCIQPGS 593 (690)
T ss_dssp -EEECCSTTC
T ss_pred -EEECCCCCc
Confidence 3777 7776
No 25
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.14 E-value=1.5e-10 Score=94.42 Aligned_cols=106 Identities=26% Similarity=0.616 Sum_probs=75.5
Q ss_pred CCCCCCCEEecCCCCeeEeCC----CCCcCCCCCCCCCCCCC---CCCCCCcEEeeCC------eecccccc-CCCCCCC
Q psy9688 48 DPCLGHGTCINRSDRYQCLCT----PRYSGNNCEKDNGDCSS---NPCLNDGVCVDEV------YKGRYWEL-PEIRDCT 113 (181)
Q Consensus 48 ~~c~~~~~C~~~~~~~~C~c~----~g~~g~~c~~~~~~c~~---~~c~~~~~C~~~~------~~g~~c~~-~~~~~c~ 113 (181)
.+|.++++|+. +.|.|. +||+|..|+.++..|.. .+|.+.+.|.... |.|..|.. ..++.|.
T Consensus 493 ~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~ 568 (690)
T 3fcs_B 493 PVCSQRGECLC----GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCM 568 (690)
T ss_dssp CGGGGSEEECS----SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTB
T ss_pred CCCCCCCEEEC----CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCccc
Confidence 34777888874 388888 88888888766777764 3577777776533 78888873 1456776
Q ss_pred C---CCCCCCCEEeeCCCCceEeec-CCCCccCCccccCCCCCCCCCCCCCCCEEee
Q psy9688 114 S---NPCLNDCVCVDDGNLSFYCNC-TEDFTGEYCQFENSAACVTLNPCQNNATCVA 166 (181)
Q Consensus 114 ~---~~c~~~~~C~~~~~~~~~C~C-~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~ 166 (181)
. .+|.++++|+. ..|.| .+||.|..|+. -..| +++|.+++.|++
T Consensus 569 ~~~g~~C~~~G~C~~-----g~C~C~~~Gy~G~~Ce~--C~~C--~~~C~~~g~Cv~ 616 (690)
T 3fcs_B 569 SSNGLLCSGRGKCEC-----GSCVCIQPGSYGDTCEK--CPTC--PDACTFKKECVE 616 (690)
T ss_dssp CTTSSBTSSSCEEET-----TEEECCSTTCBSTTSCB--CTTS--CCTTTSCCGGGT
T ss_pred CCCCCCCCCCCEEeC-----CEEECCCCCccCCCcCc--CCCC--CCCCCCCCCccc
Confidence 4 46888999964 27999 89999999962 2345 357888888763
No 26
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.11 E-value=4.4e-11 Score=79.84 Aligned_cols=67 Identities=30% Similarity=0.744 Sum_probs=56.3
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCC-CCCCCCCCEE-eeCCCCcceEEecCCCC
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT-LNPCQNNATC-VASPGEKQITCLCLKEV 181 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~-~~~C~~~~~C-~~~~g~~~~~C~C~~g~ 181 (181)
++++|...||.++++|++ ..++|+|.|++||+|..|+ ++++|.. +.+|.+ +| +++.++ |.|.|++||
T Consensus 47 dideC~~~pC~n~g~C~~-~~~~y~C~C~~G~~G~~C~--~~deC~~~~~~C~~--~C~~n~~g~--y~C~C~~Gy 115 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKD-DINSYECWCQVGFEGKNCE--LDATCNIKNGRCKQ--FCKTGADSK--VLCSCTTGY 115 (146)
T ss_dssp ---CCSSCSSCTTCEEEE-CSSCEEEECCSSEESTTTC--EECCTTSGGGSCSS--BCCCCSSSC--CCCBCCTTE
T ss_pred CcCcCCCCCCCCCCEeEC-CCCCEEEecCCCCcCCcCC--CCccccCCCCCCcC--CCCCCCCCC--EEeEcCCCc
Confidence 678898889999999999 8899999999999999998 5688876 346765 89 999998 889999997
No 27
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.10 E-value=2.1e-11 Score=84.83 Aligned_cols=78 Identities=31% Similarity=0.729 Sum_probs=25.4
Q ss_pred cccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCC-CCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCC
Q psy9688 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDN-GDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPC 117 (181)
Q Consensus 39 ~~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~-~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c 117 (181)
+.++++|.+.||.++++|++..+.|.|.|++||+|..|+..+ ++|...+ .+|
T Consensus 39 c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~---------------------------~~C 91 (195)
T 1nfu_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDN---------------------------GDC 91 (195)
T ss_dssp ------------------------------------------CCGGGTGG---------------------------GGC
T ss_pred CCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCC---------------------------CCC
Confidence 678899999999999999999999999999999999998545 4453211 124
Q ss_pred CCCCEEeeCCCCceEeecCCCCc----cCCccc
Q psy9688 118 LNDCVCVDDGNLSFYCNCTEDFT----GEYCQF 146 (181)
Q Consensus 118 ~~~~~C~~~~~~~~~C~C~~g~~----g~~c~~ 146 (181)
.. +|++ ..++|.|.|++||. |..|..
T Consensus 92 ~~--~C~n-~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 92 DQ--FCHE-EQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp SS--EEEE-ETTEEEEECCTTEEECTTSSCEEE
T ss_pred CC--EeEC-CCCCeEEECCCCceeCCCCCcccc
Confidence 43 8888 88999999999999 888874
No 28
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.10 E-value=1.1e-10 Score=77.53 Aligned_cols=81 Identities=30% Similarity=0.681 Sum_probs=62.3
Q ss_pred cccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCC
Q psy9688 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCL 118 (181)
Q Consensus 39 ~~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~ 118 (181)
+.++++|.+.||.++++|++..+.|.|.|++||+|..|+.+++++...++. ...|.
T Consensus 44 c~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~------------------------~~~C~ 99 (142)
T 2c4f_L 44 YSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLICVNE------------------------NGGCE 99 (142)
T ss_dssp HTTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCSTTTG------------------------GGGCS
T ss_pred CCccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccccCC------------------------CCCcc
Confidence 567899999999999999999999999999999999998545444221111 11122
Q ss_pred CCCEEeeCCCC-ceEeecCCCCc----cCCccc
Q psy9688 119 NDCVCVDDGNL-SFYCNCTEDFT----GEYCQF 146 (181)
Q Consensus 119 ~~~~C~~~~~~-~~~C~C~~g~~----g~~c~~ 146 (181)
.+|++ ..+ +|+|.|++||. |..|..
T Consensus 100 --~~C~~-~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 100 --QYCSD-HTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp --SEEEC-CTTSCCEEECCTTEEECTTSSCEEE
T ss_pred --CEeEC-CCCCCEEEECCCCceECCCCCCCCC
Confidence 27887 777 99999999998 888873
No 29
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.09 E-value=3e-11 Score=73.55 Aligned_cols=77 Identities=30% Similarity=0.746 Sum_probs=56.0
Q ss_pred cCcCCCCCC--CCCCCEEecCCCCeeEeCCCCCc----CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCC
Q psy9688 41 KVDHCLTDP--CLGHGTCINRSDRYQCLCTPRYS----GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTS 114 (181)
Q Consensus 41 ~~~~c~~~~--c~~~~~C~~~~~~~~C~c~~g~~----g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~ 114 (181)
++++|...+ | ++++|++..+.|.|.|++||. |..|+ ++ ++|..
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-di-----------------------------deC~~ 50 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DI-----------------------------DECSE 50 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CC-----------------------------CHHHH
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-Cc-----------------------------CeeCC
Confidence 578887766 8 678999999999999999998 55554 44 44444
Q ss_pred CCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCC
Q psy9688 115 NPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACV 153 (181)
Q Consensus 115 ~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~ 153 (181)
.+|. ++|++ ..++|+|.|+ |+.|..+.. +...|.
T Consensus 51 ~~C~--~~C~n-~~g~y~C~C~-g~~G~~~~~-~~~~C~ 84 (87)
T 1z6c_A 51 NMCA--QLCVN-YPGGYTCYCD-GKKGFKLAQ-DQKSCE 84 (87)
T ss_dssp SCCS--SEECC-CSSSCCEECC-SSSCCBCCT-TSSSCB
T ss_pred CCCC--CEEEc-cCCCEEEECC-CCcCCcccC-CCCcce
Confidence 4555 58888 8899999997 666665553 444453
No 30
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.07 E-value=1.1e-10 Score=77.64 Aligned_cols=69 Identities=26% Similarity=0.595 Sum_probs=56.5
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCC---EEeeCCC-CcceEEecCCCC
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNA---TCVASPG-EKQITCLCLKEV 181 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~---~C~~~~g-~~~~~C~C~~g~ 181 (181)
++++|...||.++++|++ ..++|+|.|++||+|..|+. +++.|.. ..+.+++ +|+++.+ + |.|.|++||
T Consensus 46 did~C~~~pC~n~g~C~~-~~g~y~C~C~~G~~G~~C~~-~~~~c~~-c~~~~~~C~~~C~~~~g~~--y~C~C~~Gy 118 (142)
T 2c4f_L 46 DGDQCASSPCQNGGSCKD-QLQSYICFCLPAFEGRNCET-HKDDQLI-CVNENGGCEQYCSDHTGTK--RSCRCHEGY 118 (142)
T ss_dssp TCCGGGGCCCCTTCEEEE-ETTEEEEECCTTEESTTSCE-EGGGCCS-TTTGGGGCSSEEECCTTSC--CEEECCTTE
T ss_pred ccCcCcCCCcCCCCEEeC-CCCCEEeeCCCCccCCcccc-Ccccccc-ccCCCCCccCEeECCCCCC--EEEECCCCc
Confidence 678898889999999999 88999999999999999984 3555433 2333444 9999998 8 889999997
No 31
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.07 E-value=3.9e-11 Score=78.99 Aligned_cols=78 Identities=31% Similarity=0.737 Sum_probs=24.9
Q ss_pred cccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCC-CCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCC
Q psy9688 39 NSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDN-GDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPC 117 (181)
Q Consensus 39 ~~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~-~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c 117 (181)
+.++++|.+.||.++++|++..+.|.|.|++||+|..|+..+ ++|... ..+|
T Consensus 39 c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~---------------------------~~~C 91 (134)
T 2vh0_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD---------------------------NGDC 91 (134)
T ss_dssp ------------------------------------------CCGGGTG---------------------------GGGC
T ss_pred CCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccC---------------------------CCCC
Confidence 678899999999999999999999999999999999998445 445321 1123
Q ss_pred CCCCEEeeCCCCceEeecCCCCc----cCCccc
Q psy9688 118 LNDCVCVDDGNLSFYCNCTEDFT----GEYCQF 146 (181)
Q Consensus 118 ~~~~~C~~~~~~~~~C~C~~g~~----g~~c~~ 146 (181)
.. +|++ ..++|+|.|++||. |..|..
T Consensus 92 ~~--~C~~-~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 92 DQ--FCHE-EQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp SS--EEEE-ETTEEEEECCTTEEECTTSSCEEE
T ss_pred CC--EeEC-CCCCEEEECCCCcEECCCCCccCc
Confidence 33 7888 78999999999998 888873
No 32
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.06 E-value=2.3e-10 Score=85.97 Aligned_cols=114 Identities=31% Similarity=0.815 Sum_probs=67.1
Q ss_pred cCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCC-------eeccccccCCCCCCCCC
Q psy9688 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEV-------YKGRYWELPEIRDCTSN 115 (181)
Q Consensus 43 ~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~-------~~g~~c~~~~~~~c~~~ 115 (181)
..| +.+|.++++|.+ .+.|.|.+||+|..|+. +.|. .+|.+++.|.... |.|..|.. +.|. .
T Consensus 149 ~~C-~~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~~C~~~G~C~~~~~C~C~~G~~G~~C~~---~~C~-~ 217 (324)
T 2ygq_A 149 AEC-PGGCRNGGFCNE---RRICECPDGFHGPHCEK--ALCT-PRCMNGGLCVTPGFCICPPGFYGVNCDK---ANCS-T 217 (324)
T ss_dssp CCC-SSCCCSSCEECT---TSCEECCTTEESSSSCE--ESSS-SCCCTTCEECSSCCEECCTTCBTTTTCB---CCCS-S
T ss_pred CCC-CCCCCCCCEECC---CCeEECCCCCcCCCCCC--CCCC-CCCCCCCEEcCCCEEeCCCCccCCCccc---CcCC-C
Confidence 345 467999999975 47999999999999974 3464 4688888887532 77877763 3464 5
Q ss_pred CCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 116 PCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 116 ~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+|.++++|+. .++|.|.+||.|..|+ ++.|. .+|.++++|+. . +.|.|++||
T Consensus 218 ~C~~~G~C~~----~~~C~C~~G~~G~~C~---~~~C~--~~C~~~g~C~~---~--~~C~C~~G~ 269 (324)
T 2ygq_A 218 TCFNGGTCFY----PGKCICPPGLEGEQCE---ISKCP--QPCRNGGKCIG---K--SKCKCSKGY 269 (324)
T ss_dssp CCCSSCCBSC----SSCBCCCTTCCTTTTC------------------------------------
T ss_pred CCCCCCeeCC----CCeeeCCCCccCCCCC---cCcCC--CcCCCCCEECC---C--CEEECCCCC
Confidence 7999999975 2689999999999996 35674 58999999974 2 569999987
No 33
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.05 E-value=7.3e-11 Score=71.68 Aligned_cols=69 Identities=30% Similarity=0.819 Sum_probs=52.2
Q ss_pred cCcCCCCCC--CCCCCEEecCCCCeeEeCCCCCc-----CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCC
Q psy9688 41 KVDHCLTDP--CLGHGTCINRSDRYQCLCTPRYS-----GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCT 113 (181)
Q Consensus 41 ~~~~c~~~~--c~~~~~C~~~~~~~~C~c~~g~~-----g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~ 113 (181)
++++|...+ |.+ ++|++..++|.|.|++||+ |..|+ +| ++|.
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-di-----------------------------deC~ 50 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DI-----------------------------DECQ 50 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-EC-----------------------------CHHH
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-Cc-----------------------------cccc
Confidence 678887655 864 5999999999999999997 44443 34 4444
Q ss_pred CCC--CCCCCEEeeCCCCceEeecCCCCccC
Q psy9688 114 SNP--CLNDCVCVDDGNLSFYCNCTEDFTGE 142 (181)
Q Consensus 114 ~~~--c~~~~~C~~~~~~~~~C~C~~g~~g~ 142 (181)
..+ |. +++|++ ..++|+|.|++||.+.
T Consensus 51 ~~~~~C~-~~~C~n-~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 51 RDPLLCR-GGVCHN-TEGSYRCECPPGHQLS 79 (86)
T ss_dssp HCSSTTT-TSEEEE-ETTEEEEESCTTSCCC
T ss_pred CCCCcCC-CCEeEc-CCCCEEEECcCCcccC
Confidence 333 44 468999 8999999999999864
No 34
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.05 E-value=2.7e-10 Score=69.87 Aligned_cols=76 Identities=17% Similarity=0.395 Sum_probs=56.1
Q ss_pred CCCCCcccCCCCCCcccccCCCCCC-CC---ceee--cCCCCcc--ccCcCCCCCCCCCCCEEecCC--CCeeEeCCCCC
Q psy9688 2 YFKPISLSTLCESDINECETVKDVC-NY---GICV--NTNGNGN--SKVDHCLTDPCLGHGTCINRS--DRYQCLCTPRY 71 (181)
Q Consensus 2 ~C~~g~~g~~C~~~~~~c~~~~~~C-~~---~~C~--~~~~~~~--~~~~~c~~~~c~~~~~C~~~~--~~~~C~c~~g~ 71 (181)
.|.+||+|..| ++++|. ..+| +. ..|. .... .+ .++++|.+.||.++++|++.. +.|.|.|++||
T Consensus 5 ~C~~g~~g~~c--~~~~c~--~~pC~n~~~~y~C~C~~G~~-~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~ 79 (91)
T 1tpg_A 5 ICRDEKTQMIY--QQHQSW--LRPVLRSNRVEYCWCNSGRA-QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGF 79 (91)
T ss_dssp CCBCSSSCCBC--CSSCEE--EEECSSSSCEEEEECSSSCC-BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTC
T ss_pred ECCCCCcCCeE--CCCccc--CCccccCCCCcEeECCCCCc-ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCC
Confidence 48899999988 477776 3444 22 1222 1111 24 367899999999999999876 88999999999
Q ss_pred cCCCCCCCCCC
Q psy9688 72 SGNNCEKDNGD 82 (181)
Q Consensus 72 ~g~~c~~~~~~ 82 (181)
+|..|+.++++
T Consensus 80 ~G~~Ce~~ide 90 (91)
T 1tpg_A 80 AGKSCEIDTRA 90 (91)
T ss_dssp BSSSCCBCSSC
T ss_pred cCCcCCcCCCC
Confidence 99999877653
No 35
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.02 E-value=2.9e-10 Score=72.74 Aligned_cols=69 Identities=29% Similarity=0.695 Sum_probs=52.3
Q ss_pred CCCCCCCCC--------CCCCCEEeeCCCCceEeecCCCCccCCcccc-CCCCCCC-CCCCCCCCEEeeCCCCcceEEec
Q psy9688 108 EIRDCTSNP--------CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE-NSAACVT-LNPCQNNATCVASPGEKQITCLC 177 (181)
Q Consensus 108 ~~~~c~~~~--------c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~-~~~~c~~-~~~C~~~~~C~~~~g~~~~~C~C 177 (181)
++++|...| |.++++|++ ..++|+|.|++||+|..|+.. ++++|.. ...|.+ +|+++.++ |.|.|
T Consensus 5 d~d~C~~~p~~~~C~~~C~~~g~C~~-~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~--y~C~C 79 (114)
T 1aut_L 5 DGDQCLVLPLEHPCASLCCGHGTCID-GIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGW--RRCSC 79 (114)
T ss_dssp ---CCCCCSSCCSSSSTTTTSEEECC-CSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSS--EEEEC
T ss_pred ecccccCCCccccccccCCCcCCCCC-CCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCC--EEeEC
Confidence 445666555 888899998 889999999999999999841 1246764 234654 99999998 89999
Q ss_pred CCCC
Q psy9688 178 LKEV 181 (181)
Q Consensus 178 ~~g~ 181 (181)
++||
T Consensus 80 ~~G~ 83 (114)
T 1aut_L 80 APGY 83 (114)
T ss_dssp CTTE
T ss_pred CCCe
Confidence 9997
No 36
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.02 E-value=7.7e-11 Score=71.73 Aligned_cols=65 Identities=32% Similarity=0.865 Sum_probs=53.9
Q ss_pred CCCCCCCCC--CCCCCEEeeCCCCceEeecCCCCc----cCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEec--CC
Q psy9688 108 EIRDCTSNP--CLNDCVCVDDGNLSFYCNCTEDFT----GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLC--LK 179 (181)
Q Consensus 108 ~~~~c~~~~--c~~~~~C~~~~~~~~~C~C~~g~~----g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C--~~ 179 (181)
++++|...+ | .+++|++ ..++|+|.|++||+ |..|+ ++++|.. ++|. ++|+++.++ |.|.| .+
T Consensus 2 dideC~~~~~~C-~~~~C~n-~~g~y~C~C~~G~~~~~~g~~C~--dideC~~-~~C~--~~C~n~~g~--y~C~C~g~~ 72 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKN-IPGDFECECPEGYRYNLKSKSCE--DIDECSE-NMCA--QLCVNYPGG--YTCYCDGKK 72 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCC-BTTBCCCSSSTTCEEETTTTEEE--CCCHHHH-SCCS--SEECCCSSS--CCEECCSSS
T ss_pred ccccccCCCCCC-CCCEeEC-CCCCEEEECCCCceECCCCCcCC--CcCeeCC-CCCC--CEEEccCCC--EEEECCCCc
Confidence 467777665 7 6788998 88999999999998 78886 8999976 7887 599999998 77999 46
Q ss_pred CC
Q psy9688 180 EV 181 (181)
Q Consensus 180 g~ 181 (181)
||
T Consensus 73 G~ 74 (87)
T 1z6c_A 73 GF 74 (87)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 37
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.00 E-value=6.2e-11 Score=82.46 Aligned_cols=68 Identities=26% Similarity=0.735 Sum_probs=23.2
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCC-CCCCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS-AACVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~-~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++++|...||.++++|++ ..++|.|.|++||+|..|+. ++ ++|.. ..+|.+ +|+++.++ |.|.|++||
T Consensus 41 dideC~~~pC~ngg~C~n-~~g~y~C~C~~Gf~G~~Ce~-~i~deC~~~~~~C~~--~C~n~~gs--y~C~C~~Gy 110 (195)
T 1nfu_B 41 DGDQCETSPCQNQGKCKD-GLGEYTCTCLEGFEGKNCEL-FTRKLCSLDNGDCDQ--FCHEEQNS--VVCSCARGY 110 (195)
T ss_dssp ------------------------------------------CCGGGTGGGGCSS--EEEEETTE--EEEECCTTE
T ss_pred CCcccCCCCCCCCCEeEC-CCCCeeEeCCCCceeccccc-cccccccCCCCCCCC--EeECCCCC--eEEECCCCc
Confidence 678888889999999998 88999999999999999984 46 78876 346766 99999998 899999997
No 38
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.98 E-value=2e-10 Score=73.92 Aligned_cols=90 Identities=22% Similarity=0.492 Sum_probs=65.0
Q ss_pred CCcccccCCCCCCCCceeecC-CCCc-----------cccCcCC----CCCCCCCCCEEecCCCCeeEeCCCCCc---CC
Q psy9688 14 SDINECETVKDVCNYGICVNT-NGNG-----------NSKVDHC----LTDPCLGHGTCINRSDRYQCLCTPRYS---GN 74 (181)
Q Consensus 14 ~~~~~c~~~~~~C~~~~C~~~-~~~~-----------~~~~~~c----~~~~c~~~~~C~~~~~~~~C~c~~g~~---g~ 74 (181)
.||++|. .++| ..+|+++ .++| ..++++| ...+|. +.|++ .+.|.|.|++||+ |.
T Consensus 2 ~dideC~--~~pC-~~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~--~~C~~-~~~y~C~C~~Gy~~~~g~ 75 (118)
T 1dx5_I 2 EPVDPCF--RANC-EYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP--ADCDP-NTQASCECPEGYILDDGF 75 (118)
T ss_dssp CCCCGGG--GCCC-SSEEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE--CEECT-TSTTCEECCTTEEEETTT
T ss_pred CccccCC--CCCC-CCCCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC--CcccC-CCCeEeECCCCccCCCCC
Confidence 3789997 7899 3499999 8888 1123344 334443 67887 5789999999998 66
Q ss_pred CCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCC-CCCCCCCEEeeCCCCceEeecCCCCccC
Q psy9688 75 NCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTS-NPCLNDCVCVDDGNLSFYCNCTEDFTGE 142 (181)
Q Consensus 75 ~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~-~~c~~~~~C~~~~~~~~~C~C~~g~~g~ 142 (181)
.|+ +|++| .. .+| .++|++ ..++|+|.|++||++.
T Consensus 76 ~C~-dideC-----------------------------~~~~~C--~~~C~n-~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 76 ICT-DIDEC-----------------------------ENGGFC--SGVCHN-LPGTFECICGPDSALA 111 (118)
T ss_dssp EEE-ECCHH-----------------------------HHCSSC--SSEEEE-CSSSEEEEECSSSSCE
T ss_pred ccc-ccccc-----------------------------CCCCCC--cCeEEe-CCCCEEEECCCCCccC
Confidence 664 55444 33 456 468998 8999999999999754
No 39
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.98 E-value=8.9e-10 Score=82.64 Aligned_cols=73 Identities=30% Similarity=0.886 Sum_probs=58.0
Q ss_pred ccCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCC
Q psy9688 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLN 119 (181)
Q Consensus 40 ~~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~ 119 (181)
.++++|...||.++++|++..+.|.|.|++||.|..|+.++++|.... ..+|.+
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~--------------------------~~~C~~ 56 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPER--------------------------TDGCQH 56 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTC--------------------------TTSCSS
T ss_pred ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCC--------------------------CCCCcC
Confidence 467899999999999999988999999999999999987777774310 124444
Q ss_pred CCEEeeCCCCceEeecCCCCcc
Q psy9688 120 DCVCVDDGNLSFYCNCTEDFTG 141 (181)
Q Consensus 120 ~~~C~~~~~~~~~C~C~~g~~g 141 (181)
.|++ ..++|.|.|.+||.+
T Consensus 57 --~C~~-~~g~~~C~C~~g~~~ 75 (317)
T 3h5c_B 57 --FCLP-GQESYTCSCAQGYRL 75 (317)
T ss_dssp --EEEC-CSSSCEEECCTTEEC
T ss_pred --cccc-CCCeeEEeccccccc
Confidence 7888 889999999999985
No 40
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.96 E-value=1.2e-10 Score=76.69 Aligned_cols=68 Identities=26% Similarity=0.735 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCC-CCCCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENS-AACVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~-~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+++.|...||.++++|++ ..++|+|.|++||+|..|+. .+ ++|.. +.+|.+ +|+++.++ |.|.|++||
T Consensus 41 d~d~C~~~pC~n~g~C~~-~~~~y~C~C~~G~~G~~C~~-~i~d~C~~~~~~C~~--~C~~~~g~--y~C~C~~Gy 110 (134)
T 2vh0_B 41 DGDQCETSPCQNQGKCKD-GLGEYTCTCLEGFEGKNCEL-FTRKLCSLDNGDCDQ--FCHEEQNS--VVCSCARGY 110 (134)
T ss_dssp ------------------------------------------CCGGGTGGGGCSS--EEEEETTE--EEEECCTTE
T ss_pred CcCcCCCCCCCCcCCccc-CCCCEEeeCCCCccCCcccc-CCCCccccCCCCCCC--EeECCCCC--EEEECCCCc
Confidence 667888888999899998 78899999999999999984 46 77865 345766 99999998 899999997
No 41
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.92 E-value=1.4e-09 Score=81.62 Aligned_cols=68 Identities=26% Similarity=0.747 Sum_probs=58.6
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCC--CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT--LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~--~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++++|...||.++++|.+ ..+.|.|.|++||.|+.|+. ++++|.. .++|.+ +|+++.++ |.|.|++||
T Consensus 4 d~~~C~~~pC~~~g~C~~-~~~~~~C~C~~g~~g~~C~~-~~~eC~~~~~~~C~~--~C~~~~g~--~~C~C~~g~ 73 (317)
T 3h5c_B 4 GGSPCISQPCLHNGSCQD-SIWGYTCTCSPGYEGSNCEL-AKNECHPERTDGCQH--FCLPGQES--YTCSCAQGY 73 (317)
T ss_dssp --CCTTSCCCTTTCCCCC-CSSSCCCCCSSSCCSSSSCC-CSSSCCTTCTTSCSS--EEECCSSS--CEEECCTTE
T ss_pred cCCcCCCCCCCCCCEeEC-CCCCeEEECCCCCcCCcccc-CcccCCCCCCCCCcC--ccccCCCe--eEEeccccc
Confidence 567888889999999998 78899999999999999986 8899975 268987 99999998 889999986
No 42
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.89 E-value=4.7e-10 Score=70.81 Aligned_cols=54 Identities=26% Similarity=0.696 Sum_probs=22.0
Q ss_pred CEEeeCCCCceEeecCCCCcc---CCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 121 CVCVDDGNLSFYCNCTEDFTG---EYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 121 ~~C~~~~~~~~~C~C~~g~~g---~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++|++ ..++|.|.|++||.+ ..|+ ++++|...++|. ++|+++.++ |.|.|++||
T Consensus 41 ~~C~n-~~g~y~C~C~~Gy~g~~g~~C~--dideC~~~~~C~--~~C~n~~gs--y~C~C~~Gy 97 (107)
T 2w2n_E 41 YVCND-LKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTCS--QLCVNLEGG--YKCQCEEGF 97 (107)
T ss_dssp SEEEC-CSBSCEEECCTTCEEETTTEEE--C---------------------------------
T ss_pred CEeEe-CCCCeEEECCCCccccCCCccc--cccccCCCCCcC--CeeecCCCC--EEEECCCCc
Confidence 48888 889999999999997 7887 899997446786 599999998 889999987
No 43
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.81 E-value=3.1e-09 Score=86.63 Aligned_cols=120 Identities=28% Similarity=0.629 Sum_probs=85.2
Q ss_pred CCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCC---------CCCCC----CCCCCcEEee------------CCee
Q psy9688 46 LTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNG---------DCSSN----PCLNDGVCVD------------EVYK 100 (181)
Q Consensus 46 ~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~---------~c~~~----~c~~~~~C~~------------~~~~ 100 (181)
.+.+|.+++.|... .|.|.+||+|..|+..++ .|... +|.+++.|.. ..|.
T Consensus 433 ~s~~Cs~~G~C~~g----~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G~C~C~~~~~~~~G~~ 508 (687)
T 3k6s_B 433 DRSLCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIY 508 (687)
T ss_dssp CSSTGGGSEEESSS----SEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEETTEEEECCCCSTTCCEE
T ss_pred CCCCCCCCCEEeCC----EeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeCCEEEcCCCCCCCCCcc
Confidence 34568888888743 899999999999984333 46432 3777776542 2277
Q ss_pred ccccccCCCCCCCC---CCCCC--CCEEeeCCCCceEeecCCCCccCCcccc-CCCCCCC--CCCCCCCCEEeeCCCCcc
Q psy9688 101 GRYWELPEIRDCTS---NPCLN--DCVCVDDGNLSFYCNCTEDFTGEYCQFE-NSAACVT--LNPCQNNATCVASPGEKQ 172 (181)
Q Consensus 101 g~~c~~~~~~~c~~---~~c~~--~~~C~~~~~~~~~C~C~~g~~g~~c~~~-~~~~c~~--~~~C~~~~~C~~~~g~~~ 172 (181)
|..|+. +...|.. .+|.+ +++|.. ..|.|.+||+|..|+.. +++.|.. ..+|.++|.|.. +.
T Consensus 509 G~~Ce~-~~~~C~~~~~~~C~~~~~G~C~~-----g~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~--g~-- 578 (687)
T 3k6s_B 509 GQYCEC-DTINCERYNGQVCGGPGRGLCFC-----GKCRCHPGFEGSACQCERTTEGCLNPRRVECSGRGRCRC--NV-- 578 (687)
T ss_dssp STTSCE-ESSCSCEETTEETSHHHHEEEET-----TEEEECTTCCSTTSCSCCSSCTTBCTTCSBTSSSCCBCS--SC--
T ss_pred cccccc-ccccccCCCCcCcCCCCCCeEEC-----CEEEcCCCCcCCCCccCCCCCCCCCCCCCCCCCCCcCCC--CE--
Confidence 888875 4566763 35877 889964 27999999999999741 2567765 136999999975 33
Q ss_pred eEEecCCCC
Q psy9688 173 ITCLCLKEV 181 (181)
Q Consensus 173 ~~C~C~~g~ 181 (181)
|.|++||
T Consensus 579 --C~C~~Gy 585 (687)
T 3k6s_B 579 --CECHSGY 585 (687)
T ss_dssp --BCCSTTC
T ss_pred --EECCCCC
Confidence 9999987
No 44
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.79 E-value=2.4e-09 Score=87.28 Aligned_cols=104 Identities=27% Similarity=0.670 Sum_probs=70.4
Q ss_pred CCCCCCEEecCCCCeeEeCC------CCCcCCCCCCCCCCCCC---CCCCC--CcEEeeCC------eeccccccC-CCC
Q psy9688 49 PCLGHGTCINRSDRYQCLCT------PRYSGNNCEKDNGDCSS---NPCLN--DGVCVDEV------YKGRYWELP-EIR 110 (181)
Q Consensus 49 ~c~~~~~C~~~~~~~~C~c~------~g~~g~~c~~~~~~c~~---~~c~~--~~~C~~~~------~~g~~c~~~-~~~ 110 (181)
+|.+++.|+.. .|.|. +||.|..|+.++..|.. .+|.+ .+.|.... |.|..|..+ ..+
T Consensus 483 ~Cs~~G~C~~G----~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g~C~C~~G~~G~~Cec~~~~~ 558 (687)
T 3k6s_B 483 ICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCGKCRCHPGFEGSACQCERTTE 558 (687)
T ss_dssp GGGSSEEEETT----EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETTEEEECTTCCSTTSCSCCSSC
T ss_pred cCCCCCEEeCC----EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECCEEEcCCCCcCCCCccCCCCC
Confidence 47777788743 78887 88888888755566653 24665 55555332 777777642 245
Q ss_pred CCCCC---CCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEe
Q psy9688 111 DCTSN---PCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCV 165 (181)
Q Consensus 111 ~c~~~---~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~ 165 (181)
.|... +|.++++|.. ..|.|.+||.|..|+. ...|. ++|.+++.|+
T Consensus 559 ~C~~~~g~~Cs~~G~C~~-----g~C~C~~Gy~G~~Ce~--c~~C~--~~C~~~g~Cv 607 (687)
T 3k6s_B 559 GCLNPRRVECSGRGRCRC-----NVCECHSGYQLPLCQE--CPGCP--SPCGKYISCA 607 (687)
T ss_dssp TTBCTTCSBTSSSCCBCS-----SCBCCSTTCCTTTTCC--CTTSC--CCCTTTHHHH
T ss_pred CCCCCCCCCCCCCCcCCC-----CEEECCCCCcCCCCCC--CCCCC--cccCCCCCCC
Confidence 66543 6888889964 3699999999999973 23462 5788877775
No 45
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.78 E-value=4e-09 Score=72.08 Aligned_cols=129 Identities=23% Similarity=0.629 Sum_probs=86.5
Q ss_pred CCCCCcccCCCCCCcccccCCCCCC-CCceeecCC-----CCc---cccCcCCCCCCCC-CCCEEecCCCCeeEeCCCCC
Q psy9688 2 YFKPISLSTLCESDINECETVKDVC-NYGICVNTN-----GNG---NSKVDHCLTDPCL-GHGTCINRSDRYQCLCTPRY 71 (181)
Q Consensus 2 ~C~~g~~g~~C~~~~~~c~~~~~~C-~~~~C~~~~-----~~~---~~~~~~c~~~~c~-~~~~C~~~~~~~~C~c~~g~ 71 (181)
.|.+||.|..|+ ..|.. ...| .++.|.... .+| ..+.+.|. ..|. .++.|++ .+.|.|.+||
T Consensus 20 ~C~~g~~G~~C~---~~C~~-~~~c~~~g~C~~~g~C~C~~G~~G~~C~~~~C~-~~C~~~~g~C~~---~~~C~C~~G~ 91 (169)
T 2vj2_A 20 TCDDYYYGFGCN---KFCRP-RDDFFGHYACDQNGNKTCMEGWMGPECNRAICR-QGCSPKHGSCKL---PGDCRCQYGW 91 (169)
T ss_dssp -CCTTEETTTTC---EECCC-EEETTEEEEECSSCCEEECTTEESTTSCEECCC-TTCCTTTEECSS---TTCCEECTTE
T ss_pred eCCCcCcCCCcc---cccCC-CCCcCCCCEeCCCCeeECCCCCcCCCCCCCCCC-CCCCCCCcccCC---CCeeECCCCC
Confidence 488999999996 24552 2345 566664211 223 12224453 3464 5677865 5799999999
Q ss_pred cCCCCCCCCCCCCCCC-CCCCcEEeeC-------CeeccccccCCCCCCCC-CCCCCCCEEeeCC-CCceEeecCCCCcc
Q psy9688 72 SGNNCEKDNGDCSSNP-CLNDGVCVDE-------VYKGRYWELPEIRDCTS-NPCLNDCVCVDDG-NLSFYCNCTEDFTG 141 (181)
Q Consensus 72 ~g~~c~~~~~~c~~~~-c~~~~~C~~~-------~~~g~~c~~~~~~~c~~-~~c~~~~~C~~~~-~~~~~C~C~~g~~g 141 (181)
+|..|+. |...+ |.++ .|+.. .|.|..|.. ++++|.. .+|.++++|++ . .++|+|.|++||+|
T Consensus 92 ~G~~C~~----C~~~~~C~~g-~C~~~~~C~C~~G~~G~~C~~-~~~~C~~~~~C~~~g~C~~-~~~~~~~C~C~~G~~G 164 (169)
T 2vj2_A 92 QGLYCDK----CIPHPGCVHG-ICNEPWQCLCETNWGGQLCDK-DLNYCGTHQPCLNGGTCSN-TGPDKYQCSCPEGYSG 164 (169)
T ss_dssp ESSSSCE----ECCCTTCSSE-ECSSTTCCEECTTEETTTTCE-ESCHHHHTCCCCTTCEEEE-CSTTCEEEECCTTCCS
T ss_pred CCCCccc----CCCCCCCCCC-CcCCCCEEeCCCCCCCCcccC-CCCCCCCCCCCCCCCEEcC-CCCCCcEeECCCCCcC
Confidence 9999863 33333 5432 55422 188888875 5677764 78999999998 5 78899999999999
Q ss_pred CCcc
Q psy9688 142 EYCQ 145 (181)
Q Consensus 142 ~~c~ 145 (181)
..|+
T Consensus 165 ~~Ce 168 (169)
T 2vj2_A 165 PNCE 168 (169)
T ss_dssp TTSC
T ss_pred cCcC
Confidence 9885
No 46
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.73 E-value=3.5e-08 Score=76.70 Aligned_cols=104 Identities=26% Similarity=0.662 Sum_probs=67.0
Q ss_pred CCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCC-CCCCCCCCEEeeCC
Q psy9688 49 PCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCT-SNPCLNDCVCVDDG 127 (181)
Q Consensus 49 ~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~-~~~c~~~~~C~~~~ 127 (181)
+|.++++|.+ +.+.|.|++||.|..|+...++. +.|..|. +.|. ..+|.+.+.|.
T Consensus 204 ~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g---------------~~g~~C~----~~C~~~~~C~~~g~C~--- 259 (423)
T 2gy5_A 204 ACMNNGVCHE--DTGECICPPGFMGRTCEKACELH---------------TFGRTCK----ERCSGQEGCKSYVFCL--- 259 (423)
T ss_dssp CCCTTCEECT--TTCCEECCTTEESTTSCEECCTT---------------EESTTSC----EECCSTTTTTTCCEEE---
T ss_pred CCCCCCEEEC--CCCcEeCCCCccCCCcccccCCC---------------CCCCCcC----ccCCCCCCCCCCCEEC---
Confidence 6777888865 34678888888888886332211 1111121 1333 34677778884
Q ss_pred CCceEeecCCCCccCCcccc-----CCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 128 NLSFYCNCTEDFTGEYCQFE-----NSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 128 ~~~~~C~C~~g~~g~~c~~~-----~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
.+.++|.|.+||.|..|+.. .-..|...-+|.++++|.+.. .|.|++||
T Consensus 260 ~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~-----~C~C~~G~ 313 (423)
T 2gy5_A 260 PDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ-----GCLCSPGW 313 (423)
T ss_dssp TTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT-----EEECCTTC
T ss_pred CCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC-----ceECCCCC
Confidence 35689999999999988630 012343223688999998664 29999987
No 47
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.67 E-value=1.4e-08 Score=78.45 Aligned_cols=64 Identities=25% Similarity=0.651 Sum_probs=53.9
Q ss_pred CCCCCCCCCCCEEeeCCCCceEeecCCCCc---cCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 111 DCTSNPCLNDCVCVDDGNLSFYCNCTEDFT---GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 111 ~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~---g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+|...++...+.|.+ ..++|.|.|++||. |..|+ ++++|..+++|.+ .|+++.|+ |.|.|.+||
T Consensus 2 eC~~~~~~c~~~C~~-~~~~y~C~C~~G~~~~~~~~C~--dideC~~~~~C~~--~C~n~~g~--~~C~C~~g~ 68 (400)
T 3p5b_L 2 ECLDNNGGCSHVCND-LKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTCSQ--LCVNLEGG--YKCQCEEGF 68 (400)
T ss_dssp CTTTTGGGCSSEEEE-CSSSEEEECCTTEEECSSSCEE--ECCCCSTTSSCSS--CCBCCSSS--CBCCCCTTC
T ss_pred cccCCCCCCCCEeEC-CCCCeEEECCCCCCcCCCCccc--CchhhhccCCCCC--ccCCCccc--eeeeccccc
Confidence 455555666679999 89999999999998 78897 8999976578876 89999998 889999987
No 48
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.66 E-value=3e-08 Score=50.62 Aligned_cols=37 Identities=38% Similarity=1.043 Sum_probs=34.1
Q ss_pred cCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCC
Q psy9688 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77 (181)
Q Consensus 41 ~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~ 77 (181)
++++|.+.||.++++|++..+.|.|.|++||+|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 5788999999999999998899999999999999886
No 49
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.63 E-value=2.8e-08 Score=54.49 Aligned_cols=41 Identities=24% Similarity=0.671 Sum_probs=33.9
Q ss_pred ccCcCCCCCCCCCCCEEe-----cCCCCeeEeCCCCCcCCCCCCCC
Q psy9688 40 SKVDHCLTDPCLGHGTCI-----NRSDRYQCLCTPRYSGNNCEKDN 80 (181)
Q Consensus 40 ~~~~~c~~~~c~~~~~C~-----~~~~~~~C~c~~g~~g~~c~~~~ 80 (181)
.++++|.+.||.++++|+ +..+.|.|.|++||+|..|+..+
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence 457889999999999994 55678999999999999998655
No 50
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.58 E-value=5.7e-08 Score=53.28 Aligned_cols=38 Identities=26% Similarity=0.712 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCCCCEE-----eeCCCCceEeecCCCCccCCccc
Q psy9688 108 EIRDCTSNPCLNDCVC-----VDDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C-----~~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
++++|...||.++++| ++ ..+.|+|.|++||+|+.|+.
T Consensus 7 ~~~eC~s~pC~NgGtC~~~~~~d-~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 7 KCAEKEKTFCVNGGECFMVKDLS-NPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp ECCSTTTTTSCTTCEEEEECCC---CCCEEEEECTTEESTTSCE
T ss_pred cCCCCcCCCCCCCCCcCCCCccC-CCCCEeEeCCCCCcCCCcCc
Confidence 4566666677777777 34 56789999999999999985
No 51
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.56 E-value=2.8e-07 Score=76.05 Aligned_cols=54 Identities=26% Similarity=0.718 Sum_probs=46.8
Q ss_pred CEEeeCCCCceEeecCCCCc---cCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 121 CVCVDDGNLSFYCNCTEDFT---GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 121 ~~C~~~~~~~~~C~C~~g~~---g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
.+|++ ..++|.|.|++||. +..|+ ++++|....+|.+ +|+++.|+ |.|.|++||
T Consensus 306 ~~C~~-~~~~~~C~C~~G~~~~~~~~C~--dideC~~~~~C~~--~C~n~~g~--y~C~C~~G~ 362 (699)
T 1n7d_A 306 HVCND-LKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTCSQ--LCVNLEGG--YKCQCEEGF 362 (699)
T ss_dssp TTCCC-CTTCCCCCCCSSSCCCSSSCCC--CCCCCSSSSSCTT--TCCBCSSC--BCCCCCSSC
T ss_pred CCccc-CCCCcEEeCCCCeEcCCCCccc--CccccCCCCcccc--ccccCCCC--eeeeeeccc
Confidence 57888 88999999999998 77887 8999975467864 89999999 889999997
No 52
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.52 E-value=2.8e-07 Score=50.29 Aligned_cols=41 Identities=32% Similarity=0.791 Sum_probs=35.1
Q ss_pred cCcCCCCC---CCCCCCEEe--cCCCCeeEeCCCCCcCCCCCCCCC
Q psy9688 41 KVDHCLTD---PCLGHGTCI--NRSDRYQCLCTPRYSGNNCEKDNG 81 (181)
Q Consensus 41 ~~~~c~~~---~c~~~~~C~--~~~~~~~C~c~~g~~g~~c~~~~~ 81 (181)
++++|.+. ||.++++|+ +..+.|.|.|++||+|..|+..+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 47 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDL 47 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCc
Confidence 46788776 999999999 788899999999999999986543
No 53
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.50 E-value=2.3e-08 Score=63.03 Aligned_cols=57 Identities=28% Similarity=0.732 Sum_probs=21.3
Q ss_pred CEEecCCCCeeEeCCCCCcC---CCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCCCCc
Q psy9688 54 GTCINRSDRYQCLCTPRYSG---NNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLS 130 (181)
Q Consensus 54 ~~C~~~~~~~~C~c~~g~~g---~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~ 130 (181)
.+|++..+.|.|.|++||.| ..|+ +|++|.. ..+|. ++|++ ..++
T Consensus 41 ~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~----------------------------~~~C~--~~C~n-~~gs 88 (107)
T 2w2n_E 41 YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD----------------------------PDTCS--QLCVN-LEGG 88 (107)
T ss_dssp SEEECCSBSCEEECCTTCEEETTTEEE-C---------------------------------------------------
T ss_pred CEeEeCCCCeEEECCCCccccCCCccc-cccccCC----------------------------CCCcC--Ceeec-CCCC
Confidence 48999899999999999987 5666 5655531 12443 47888 8899
Q ss_pred eEeecCCCCccC
Q psy9688 131 FYCNCTEDFTGE 142 (181)
Q Consensus 131 ~~C~C~~g~~g~ 142 (181)
|.|.|++||.+.
T Consensus 89 y~C~C~~Gy~~~ 100 (107)
T 2w2n_E 89 YKCQCEEGFQLD 100 (107)
T ss_dssp ------------
T ss_pred EEEECCCCceEC
Confidence 999999999754
No 54
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.49 E-value=2.1e-07 Score=47.41 Aligned_cols=37 Identities=41% Similarity=0.863 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCcc
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~ 145 (181)
++++|...||.++++|++ ..+.|+|.|++||+|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~-~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKD-DINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEE-ETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEc-CCCceEeECCCCCcCCccC
Confidence 567888889999999998 8899999999999999885
No 55
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.49 E-value=2.5e-08 Score=76.68 Aligned_cols=67 Identities=22% Similarity=0.506 Sum_probs=13.7
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCCCCc----cCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFT----GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~----g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++++|...++.....|.+ ..++|.|.|++||. |+.|. ++++|...++|.+ .|+++.|+ |.|.|++||
T Consensus 2 ~~~~C~~~~~~c~~~C~~-~~g~~~C~C~~G~~l~~~~~~C~--d~~eC~~~~~C~~--~C~~~~g~--~~C~C~~g~ 72 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQM-IRGAVQCTCHTGYRLTEDGRTCQ--DVNECAEEGYCSQ--GCTNSEGA--FQCWCEAGY 72 (386)
T ss_dssp -----------------------------------------------------CCTT--EEC-------CCEECCTTE
T ss_pred CcCcccCCCCCCCCCCcC-CCCCcEeECCCCceECCCCCccC--ccceeCCcCcccC--cCCCCCCC--CeEEECCCc
Confidence 346666555444458877 78889999999998 88896 8999974478986 59999999 889999986
No 56
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.46 E-value=4.7e-09 Score=70.09 Aligned_cols=39 Identities=33% Similarity=0.669 Sum_probs=28.1
Q ss_pred ccccccCCCCCCCCC--CCCCCCEEeeCCCCceEeecCCCCccCC
Q psy9688 101 GRYWELPEIRDCTSN--PCLNDCVCVDDGNLSFYCNCTEDFTGEY 143 (181)
Q Consensus 101 g~~c~~~~~~~c~~~--~c~~~~~C~~~~~~~~~C~C~~g~~g~~ 143 (181)
|..|. ++++|... +|.+ ++|++ ..++|+|.|++||++..
T Consensus 101 g~~C~--dideC~~~~~~C~~-g~C~n-~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 101 GTQCE--DIDECEVFPGVCKN-GLCVN-TRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp TTEEE--ECCHHHHSTTCSSS-SEEEE-ETTEEEEECCTTCCBCT
T ss_pred CCccC--ccccccCCCCCCCC-CEEEC-CCCCEEeeCCCCCccCC
Confidence 44444 55666533 4774 59999 89999999999998653
No 57
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.42 E-value=3.1e-07 Score=48.34 Aligned_cols=37 Identities=30% Similarity=0.721 Sum_probs=31.4
Q ss_pred CCCCC---CCCCCCEEe--cCCCCeeEeCCCCCcCCCCCCCC
Q psy9688 44 HCLTD---PCLGHGTCI--NRSDRYQCLCTPRYSGNNCEKDN 80 (181)
Q Consensus 44 ~c~~~---~c~~~~~C~--~~~~~~~C~c~~g~~g~~c~~~~ 80 (181)
+|.+. ||.++++|+ +..+.|.|.|++||+|..|+.++
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 46666 999999998 67788999999999999998554
No 58
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.41 E-value=1.8e-07 Score=72.27 Aligned_cols=68 Identities=26% Similarity=0.711 Sum_probs=51.5
Q ss_pred cCCCCCCCCCCCEEecCCCCeeEeCCCCCc---CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCC
Q psy9688 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYS---GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLN 119 (181)
Q Consensus 43 ~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~---g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~ 119 (181)
++|...++...+.|++..++|.|.|++||. |..|+ ++++|.. ..+|..
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~----------------------------~~~C~~ 51 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD----------------------------PDTCSQ 51 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCST----------------------------TSSCSS
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-Cchhhhc----------------------------cCCCCC
Confidence 467766766667999999999999999998 67775 6666641 123432
Q ss_pred CCEEeeCCCCceEeecCCCCccC
Q psy9688 120 DCVCVDDGNLSFYCNCTEDFTGE 142 (181)
Q Consensus 120 ~~~C~~~~~~~~~C~C~~g~~g~ 142 (181)
.|++ ..++|.|.|.+||.+.
T Consensus 52 --~C~n-~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 52 --LCVN-LEGGYKCQCEEGFQLD 71 (400)
T ss_dssp --CCBC-CSSSCBCCCCTTCCCC
T ss_pred --ccCC-Cccceeeecccccccc
Confidence 6777 8899999999999743
No 59
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.34 E-value=6.2e-07 Score=74.87 Aligned_cols=54 Identities=26% Similarity=0.718 Sum_probs=46.5
Q ss_pred CEEeeCCCCceEeecCCCCc---cCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 121 CVCVDDGNLSFYCNCTEDFT---GEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 121 ~~C~~~~~~~~~C~C~~g~~---g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
..|++ ..++|.|.|++||. |..|. ++++|..+..|.+ +|+++.|+ |.|.|++||
T Consensus 324 ~~C~~-~~~~y~C~C~~Gy~l~~g~~C~--dideC~~~~~C~~--~C~n~~gs--y~C~C~~Gy 380 (791)
T 3m0c_C 324 HVCND-LKIGYECLCPDGFQLVAQRRCE--DIDECQDPDTCSQ--LCVNLEGG--YKCQCEEGF 380 (791)
T ss_dssp SEEEE-CSBSEEEECCTTCEEETTTEEE--CCCCCSSSSSCTT--TCCBCSSC--BCCCCCSSE
T ss_pred ccccC-CCCCcccCCCCCCccCCCCccc--cCcccCCCCCCCC--eeecCCCC--ceeecCCCC
Confidence 48999 89999999999995 78887 8999975466754 89999999 889999987
No 60
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.33 E-value=3e-07 Score=65.04 Aligned_cols=102 Identities=27% Similarity=0.542 Sum_probs=68.8
Q ss_pred CCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCC
Q psy9688 48 DPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDG 127 (181)
Q Consensus 48 ~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~ 127 (181)
..|..+++|+.. .|.|.+||+|..|+........ ++ ....|. ......+|.++++|+.
T Consensus 96 ~~Csg~G~C~~g----~C~C~~G~~G~~Cec~~~~~~~-~~-----------~~~~C~----~~~~~~~Csg~G~C~~-- 153 (217)
T 2p28_B 96 SLCHGKGFLECG----ICRCDTGYIGKNCECQTQGRSS-QE-----------LEGSCR----KDNNSIICSGLGDCVC-- 153 (217)
T ss_dssp CTTTTSEEEETT----EEEECTTEESTTSCEECCCCC--GG-----------GGGGGB----SSTTSCBGGGTEEEET--
T ss_pred CccCCCceEECC----EEECCCCccCCcccccCccccc-cc-----------CCCcCC----CCCCCCCCCCCCEEeC--
Confidence 458889999863 8999999999999733221100 00 011122 1112356888899974
Q ss_pred CCceEeecCCC------CccCCccccCCCCCCCC--CCCCCC--CEEeeCCCCcceEEecCCCC
Q psy9688 128 NLSFYCNCTED------FTGEYCQFENSAACVTL--NPCQNN--ATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 128 ~~~~~C~C~~g------~~g~~c~~~~~~~c~~~--~~C~~~--~~C~~~~g~~~~~C~C~~g~ 181 (181)
..|.|.+| |+|..|+. ++..|... .+|..+ |+|.. + .|.|.+||
T Consensus 154 ---g~C~C~~gw~~~~~~~G~~Ce~-~~~~C~~~~g~~C~~~~~G~C~~--g----~C~C~~G~ 207 (217)
T 2p28_B 154 ---GQCLCHTSDVPGKLIYGQYCEC-DTINCERYNGQVCGGPGRGLCFC--G----KCRCHPGF 207 (217)
T ss_dssp ---TEEEECCCCSTTCCEESTTSCE-ESSCSCEETTEETTCTTTEEEET--T----EEEECTTE
T ss_pred ---CceECCCCCCCcccEECCCccc-CCccCCCCCCCCCCCCCCcEEeC--C----eeECCCCC
Confidence 26999999 68999986 56778651 268887 99984 3 49999987
No 61
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.32 E-value=1.2e-07 Score=72.83 Aligned_cols=73 Identities=22% Similarity=0.593 Sum_probs=16.2
Q ss_pred cCcCCCCCCCCCCCEEecCCCCeeEeCCCCCc----CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCC
Q psy9688 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYS----GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNP 116 (181)
Q Consensus 41 ~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~----g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~ 116 (181)
++++|...++.....|.+..++|.|.|++||. |..|+ ++++|.. ..+
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~eC~~----------------------------~~~ 52 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNECAE----------------------------EGY 52 (386)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccC-ccceeCC----------------------------cCc
Confidence 56788766644445898888899999999998 77774 6666631 123
Q ss_pred CCCCCEEeeCCCCceEeecCCCCc----cCCcc
Q psy9688 117 CLNDCVCVDDGNLSFYCNCTEDFT----GEYCQ 145 (181)
Q Consensus 117 c~~~~~C~~~~~~~~~C~C~~g~~----g~~c~ 145 (181)
|.. .|++ ..++|.|.|.+||. +..|.
T Consensus 53 C~~--~C~~-~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 53 CSQ--GCTN-SEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp CTT--EEC------CCEECCTTEEECTTSSCEE
T ss_pred ccC--cCCC-CCCCCeEEECCCceEcCCCCeEC
Confidence 433 4887 88999999999997 66665
No 62
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.32 E-value=6.4e-08 Score=65.58 Aligned_cols=68 Identities=24% Similarity=0.710 Sum_probs=47.0
Q ss_pred CCCCCCC-CCCCCCCEEeeCCCCceEeecCCCCc----cCCccccCCCC--CCC-CCCC--CCCCEEeeCCC----Ccce
Q psy9688 108 EIRDCTS-NPCLNDCVCVDDGNLSFYCNCTEDFT----GEYCQFENSAA--CVT-LNPC--QNNATCVASPG----EKQI 173 (181)
Q Consensus 108 ~~~~c~~-~~c~~~~~C~~~~~~~~~C~C~~g~~----g~~c~~~~~~~--c~~-~~~C--~~~~~C~~~~g----~~~~ 173 (181)
++++|+. .+|. +++|++ ..++|+|.|++||. |..|+ ++++ |.. .++| ..+++|+++.+ + |
T Consensus 2 dideC~~~~~C~-~~~C~n-~~gsy~C~C~~Gy~~~~~g~~C~--d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~--~ 75 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVN-TPGSYICDCPPDFELNPTRVGCV--DTRSGNCYLDIRPRGDNGDTACSNEIGVGVSK--A 75 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEE-ETTEEEEECCTTCEECTTSSBEE--CCCCEEEEEEC----------CEEEEEEEECH--H
T ss_pred ccccCCCCCCCC-CCEeEC-CCCCEEEeCCCCCeECCCCCccc--CCCCCcccCCCcccCCCCCCcccCCcCCcccC--c
Confidence 5677774 6786 689999 89999999999998 78887 6665 754 2334 35778988776 5 6
Q ss_pred EEecCCCC
Q psy9688 174 TCLCLKEV 181 (181)
Q Consensus 174 ~C~C~~g~ 181 (181)
.|.|++||
T Consensus 76 ~C~C~~G~ 83 (162)
T 1uzk_A 76 SCCCSLGK 83 (162)
T ss_dssp HHHTTTCC
T ss_pred eeeCCCCC
Confidence 78888876
No 63
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.28 E-value=2.2e-07 Score=52.70 Aligned_cols=42 Identities=24% Similarity=0.611 Sum_probs=35.6
Q ss_pred cCCCCCCCCCCCEEec-----CCCCeeEeCCCCCcCCCCCCCCCCCC
Q psy9688 43 DHCLTDPCLGHGTCIN-----RSDRYQCLCTPRYSGNNCEKDNGDCS 84 (181)
Q Consensus 43 ~~c~~~~c~~~~~C~~-----~~~~~~C~c~~g~~g~~c~~~~~~c~ 84 (181)
++|.+.||.++++|++ ..+.|.|.|++||+|..|+.+++++.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~ 53 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKV 53 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCccc
Confidence 5666789999999986 56789999999999999987777664
No 64
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.26 E-value=6.8e-06 Score=63.86 Aligned_cols=110 Identities=25% Similarity=0.661 Sum_probs=71.1
Q ss_pred CCCCCcccCCCCCCcccccCCCCCC-CCceeecCCC------Cc----ccc-C----------cCCC-CCCCCCCCEEec
Q psy9688 2 YFKPISLSTLCESDINECETVKDVC-NYGICVNTNG------NG----NSK-V----------DHCL-TDPCLGHGTCIN 58 (181)
Q Consensus 2 ~C~~g~~g~~C~~~~~~c~~~~~~C-~~~~C~~~~~------~~----~~~-~----------~~c~-~~~c~~~~~C~~ 58 (181)
.|.+||.|..|+. .| .+| +++.|.+..+ +| +.. . ++|. ..+|.+++.|.
T Consensus 188 ~C~~g~~G~~C~~---~C----~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~- 259 (423)
T 2gy5_A 188 RCEAQKWGPECNH---LC----TACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL- 259 (423)
T ss_dssp SSCTTEESTTSCE---EC----CCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE-
T ss_pred cCCCCCCCCCCCC---CC----CCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC-
Confidence 4889999999962 34 267 7788876332 12 221 1 1332 34577777785
Q ss_pred CCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCCCCceEeecCCC
Q psy9688 59 RSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTED 138 (181)
Q Consensus 59 ~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~g 138 (181)
.+.+.|.|.+||.|..|+. .|.+. |.|..|.. .| +|.++++|.+ .. .|.|.+|
T Consensus 260 -~~~~~C~C~~G~~G~~C~~---~C~~G------------~~G~~C~~----~C---~C~ngg~C~~-~~---~C~C~~G 312 (423)
T 2gy5_A 260 -PDPYGCSCATGWKGLQCNE---ACHPG------------FYGPDCKL----RC---SCNNGEMCDR-FQ---GCLCSPG 312 (423)
T ss_dssp -TTTTEEECCBTCBSGGGCB---CCCTT------------BCSBTTCC----BC---CCTTCCEEET-TT---EEECCTT
T ss_pred -CCCCeEEeCCCcccccccC---ccCCC------------CcCCcccc----cc---cCCCCCEecC-CC---ceECCCC
Confidence 4578999999999999973 23211 22333331 22 5888889976 33 3999999
Q ss_pred CccCCccc
Q psy9688 139 FTGEYCQF 146 (181)
Q Consensus 139 ~~g~~c~~ 146 (181)
|+|..|+.
T Consensus 313 ~~G~~Ce~ 320 (423)
T 2gy5_A 313 WQGLQCER 320 (423)
T ss_dssp CBSTTSCB
T ss_pred CcCCCCcc
Confidence 99999975
No 65
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.26 E-value=1.9e-06 Score=46.89 Aligned_cols=38 Identities=37% Similarity=0.842 Sum_probs=32.1
Q ss_pred CCCCCCCC---CCCCCCEEe--eCCCCceEeecCCCCccCCccc
Q psy9688 108 EIRDCTSN---PCLNDCVCV--DDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 108 ~~~~c~~~---~c~~~~~C~--~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
++++|... ||.++++|+ + ..+.|.|.|++||+|..|+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~-~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIE-SLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEES-SSSCEEEECCTTCCSSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeC-CCCCEEEECCCCCcCCcCCc
Confidence 34667665 899999998 6 78899999999999999985
No 66
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.21 E-value=1.2e-07 Score=53.18 Aligned_cols=38 Identities=26% Similarity=0.656 Sum_probs=33.8
Q ss_pred ccCcCCCCCCCCCC--CEEecCCCCeeEeCCCCCc-CCCCC
Q psy9688 40 SKVDHCLTDPCLGH--GTCINRSDRYQCLCTPRYS-GNNCE 77 (181)
Q Consensus 40 ~~~~~c~~~~c~~~--~~C~~~~~~~~C~c~~g~~-g~~c~ 77 (181)
.++++|.+.||.++ ++|++..+.|.|.|++||+ |..|+
T Consensus 9 ~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 9 ETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp TSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 45677888999988 8999999999999999999 99987
No 67
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.13 E-value=7.2e-06 Score=67.70 Aligned_cols=56 Identities=29% Similarity=0.764 Sum_probs=42.2
Q ss_pred CEEecCCCCeeEeCCCCCc---CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCCCCc
Q psy9688 54 GTCINRSDRYQCLCTPRYS---GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLS 130 (181)
Q Consensus 54 ~~C~~~~~~~~C~c~~g~~---g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~ 130 (181)
+.|++..++|.|.|++||. +..|+ ++++|.. ..+|. .+|++ ..++
T Consensus 306 ~~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~----------------------------~~~C~--~~C~n-~~g~ 353 (699)
T 1n7d_A 306 HVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD----------------------------PDTCS--QLCVN-LEGG 353 (699)
T ss_dssp TTCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSS----------------------------SSSCT--TTCCB-CSSC
T ss_pred CCcccCCCCcEEeCCCCeEcCCCCccc-CccccCC----------------------------CCccc--ccccc-CCCC
Confidence 4788888899999999998 66676 6666631 12332 36778 8899
Q ss_pred eEeecCCCCcc
Q psy9688 131 FYCNCTEDFTG 141 (181)
Q Consensus 131 ~~C~C~~g~~g 141 (181)
|+|.|.+||.+
T Consensus 354 y~C~C~~G~~~ 364 (699)
T 1n7d_A 354 YKCQCEEGFQL 364 (699)
T ss_dssp BCCCCCSSCBC
T ss_pred eeeeeeccccc
Confidence 99999999973
No 68
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.13 E-value=1.3e-06 Score=69.84 Aligned_cols=71 Identities=23% Similarity=0.422 Sum_probs=22.1
Q ss_pred CCCCCCCCCCCCEEeeC---CCCceEeecCCCCccCCccc---------cCCCCCCCCCCCCCCCEEeeCCCCcceEEec
Q psy9688 110 RDCTSNPCLNDCVCVDD---GNLSFYCNCTEDFTGEYCQF---------ENSAACVTLNPCQNNATCVASPGEKQITCLC 177 (181)
Q Consensus 110 ~~c~~~~c~~~~~C~~~---~~~~~~C~C~~g~~g~~c~~---------~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C 177 (181)
..|..-+|...++|.+. ....+.|.|.+||.|..|+. ..++.|.. .+|.+++.+...-......|.|
T Consensus 436 ~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~-C~C~~~gs~~~~C~~~tG~C~C 514 (525)
T 4aqs_A 436 YGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRP-CDCDLGGALNNSCSEDSGQCSC 514 (525)
T ss_dssp TSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC----------------------------------------
T ss_pred CCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcC-CCCCCCCccCCccCCCCCeeEC
Confidence 34444445554444320 12345799999999999852 13455655 6677777665432221245999
Q ss_pred CCCC
Q psy9688 178 LKEV 181 (181)
Q Consensus 178 ~~g~ 181 (181)
++||
T Consensus 515 ~~G~ 518 (525)
T 4aqs_A 515 LPHM 518 (525)
T ss_dssp ----
T ss_pred CCCC
Confidence 9997
No 69
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.11 E-value=1.8e-06 Score=45.46 Aligned_cols=37 Identities=32% Similarity=0.805 Sum_probs=30.5
Q ss_pred cCcCCCC---CCCCCCCEEecC--CCCeeEeCCCCCcCCCCCC
Q psy9688 41 KVDHCLT---DPCLGHGTCINR--SDRYQCLCTPRYSGNNCEK 78 (181)
Q Consensus 41 ~~~~c~~---~~c~~~~~C~~~--~~~~~C~c~~g~~g~~c~~ 78 (181)
++++|.+ .||.+ ++|+.. .+.|.|.|++||+|..|+.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 4577877 89998 899864 3679999999999999973
No 70
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.11 E-value=3.3e-06 Score=44.30 Aligned_cols=30 Identities=37% Similarity=0.788 Sum_probs=26.5
Q ss_pred CCCCCCEEe--eCCCCceEeecCCCCccCCccc
Q psy9688 116 PCLNDCVCV--DDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 116 ~c~~~~~C~--~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
||.++++|+ + ..+.|+|.|++||+|..|+.
T Consensus 10 pC~ngg~C~~~~-~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIE-SLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECT-TTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeec-CCCCEEEEcCCCCcCCcCCc
Confidence 888889997 5 67889999999999999975
No 71
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.11 E-value=5e-07 Score=50.59 Aligned_cols=37 Identities=24% Similarity=0.641 Sum_probs=32.9
Q ss_pred CCCCCCCCCCCCC--CEEeeCCCCceEeecCCCCc-cCCcc
Q psy9688 108 EIRDCTSNPCLND--CVCVDDGNLSFYCNCTEDFT-GEYCQ 145 (181)
Q Consensus 108 ~~~~c~~~~c~~~--~~C~~~~~~~~~C~C~~g~~-g~~c~ 145 (181)
.+++|...||.++ ++|++ ..++|.|.|++||+ |..|+
T Consensus 10 ~~d~C~snPC~nga~gtC~~-~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKE-TNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEE-CSSEEEEECCTTEEEEECSS
T ss_pred CCCcCcCCCCcCCCcccccc-CCCceEeECCCCCccCCCCC
Confidence 5677888899988 79999 88999999999999 99887
No 72
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.08 E-value=5.6e-06 Score=69.18 Aligned_cols=54 Identities=30% Similarity=0.828 Sum_probs=41.2
Q ss_pred EEecCCCCeeEeCCCCCc---CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCCEEeeCCCCce
Q psy9688 55 TCINRSDRYQCLCTPRYS---GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSF 131 (181)
Q Consensus 55 ~C~~~~~~~~C~c~~g~~---g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~~C~~~~~~~~ 131 (181)
.|++..++|.|.|++||. |..|+ ++++|.. ..+|. .+|++ ..++|
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~----------------------------~~~C~--~~C~n-~~gsy 372 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD----------------------------PDTCS--QLCVN-LEGGY 372 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEE-CCCCCSS----------------------------SSSCT--TTCCB-CSSCB
T ss_pred cccCCCCCcccCCCCCCccCCCCccc-cCcccCC----------------------------CCCCC--Ceeec-CCCCc
Confidence 899999999999999995 66676 6666631 11232 36888 88999
Q ss_pred EeecCCCCc
Q psy9688 132 YCNCTEDFT 140 (181)
Q Consensus 132 ~C~C~~g~~ 140 (181)
.|.|.+||.
T Consensus 373 ~C~C~~Gy~ 381 (791)
T 3m0c_C 373 KCQCEEGFQ 381 (791)
T ss_dssp CCCCCSSEE
T ss_pred eeecCCCCE
Confidence 999999996
No 73
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.90 E-value=9.9e-06 Score=42.60 Aligned_cols=38 Identities=32% Similarity=0.734 Sum_probs=29.0
Q ss_pred CCCCCCC---CCCCCCCEEeeC-CCCceEeecCCCCccCCccc
Q psy9688 108 EIRDCTS---NPCLNDCVCVDD-GNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 108 ~~~~c~~---~~c~~~~~C~~~-~~~~~~C~C~~g~~g~~c~~ 146 (181)
.+++|.. .||.+ ++|+.. ..+.|.|.|++||+|+.|+.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 3456666 68888 799751 23689999999999999974
No 74
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.81 E-value=6.8e-06 Score=46.40 Aligned_cols=43 Identities=26% Similarity=0.536 Sum_probs=33.6
Q ss_pred CCCCCCCCCCCCEEee----CCCCceEeecCCCCccCCccccCCCCCC
Q psy9688 110 RDCTSNPCLNDCVCVD----DGNLSFYCNCTEDFTGEYCQFENSAACV 153 (181)
Q Consensus 110 ~~c~~~~c~~~~~C~~----~~~~~~~C~C~~g~~g~~c~~~~~~~c~ 153 (181)
++|...||.++++|++ ...+.|.|.|++||+|..|+. +++.+.
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~-~i~~~~ 53 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE-NVPMKV 53 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE-ECCSSC
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc-CcCccc
Confidence 4566678988899974 145789999999999999986 666654
No 75
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=97.76 E-value=1.7e-05 Score=56.08 Aligned_cols=65 Identities=32% Similarity=0.724 Sum_probs=45.9
Q ss_pred CCCCCCCCEEecCCCCeeEeCCCC------CcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCC
Q psy9688 47 TDPCLGHGTCINRSDRYQCLCTPR------YSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLND 120 (181)
Q Consensus 47 ~~~c~~~~~C~~~~~~~~C~c~~g------~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~ 120 (181)
..+|.++++|+.. .|.|.+| |+|..|+.++..|... ...+|..+
T Consensus 142 ~~~Csg~G~C~~g----~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~--------------------------~g~~C~~~ 191 (217)
T 2p28_B 142 SIICSGLGDCVCG----QCLCHTSDVPGKLIYGQYCECDTINCERY--------------------------NGQVCGGP 191 (217)
T ss_dssp SCBGGGTEEEETT----EEEECCCCSTTCCEESTTSCEESSCSCEE--------------------------TTEETTCT
T ss_pred CCCCCCCCEEeCC----ceECCCCCCCcccEECCCcccCCccCCCC--------------------------CCCCCCCC
Confidence 4678889999854 8999999 5788887444344211 01145555
Q ss_pred --CEEeeCCCCceEeecCCCCccCCccc
Q psy9688 121 --CVCVDDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 121 --~~C~~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
++|.. ..|.|.+||+|..|+.
T Consensus 192 ~~G~C~~-----g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 192 GRGLCFC-----GKCRCHPGFEGSACQH 214 (217)
T ss_dssp TTEEEET-----TEEEECTTEESTTSCE
T ss_pred CCcEEeC-----CeeECCCCCccCCcCC
Confidence 78864 2799999999999974
No 76
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.63 E-value=2.3e-05 Score=42.53 Aligned_cols=33 Identities=33% Similarity=0.879 Sum_probs=28.6
Q ss_pred CCCCCCCCEEe--cCCCCeeEeCCCCCcCCCCCCC
Q psy9688 47 TDPCLGHGTCI--NRSDRYQCLCTPRYSGNNCEKD 79 (181)
Q Consensus 47 ~~~c~~~~~C~--~~~~~~~C~c~~g~~g~~c~~~ 79 (181)
..||.++++|+ +..+.|.|.|++||+|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 56899999998 6677899999999999999854
No 77
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.54 E-value=2.4e-05 Score=52.65 Aligned_cols=43 Identities=28% Similarity=0.687 Sum_probs=35.6
Q ss_pred cCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCC
Q psy9688 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCS 84 (181)
Q Consensus 41 ~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~ 84 (181)
+.++|.+.+|.++++|++..+.|.|.|++||.|..|+ .+++|.
T Consensus 118 e~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce-~~~~c~ 160 (162)
T 1g1s_A 118 YTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE-YVRDDD 160 (162)
T ss_dssp EECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSC-EECC--
T ss_pred EeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccc-cCcccC
Confidence 3467888899999999999999999999999999998 444664
No 78
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.40 E-value=9.2e-05 Score=40.08 Aligned_cols=32 Identities=38% Similarity=0.938 Sum_probs=27.4
Q ss_pred CCCCCCCCEEe--eCCCCceEeecCCCCccCCccc
Q psy9688 114 SNPCLNDCVCV--DDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 114 ~~~c~~~~~C~--~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
..||.++++|+ + ..+.|.|.|++||+|+.|+.
T Consensus 11 ~~pC~nGG~C~~~~-~~~~~~C~C~~GytG~~Ce~ 44 (53)
T 1nql_B 11 DGYCLHDGVCMYIE-ALDKYACNCVVGYIGERCQY 44 (53)
T ss_dssp CCEECTTCEEEEET-TTTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCeEEeeec-CCCCEEEecCCCCcCCCCCc
Confidence 35788889997 5 67789999999999999975
No 79
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=97.35 E-value=0.00056 Score=41.56 Aligned_cols=68 Identities=24% Similarity=0.559 Sum_probs=48.5
Q ss_pred CCCCCCCCEEeeCCCCceEeecCCCCc--cCCccccCCCCCCC-CCCCCCCCEEeeCCC---CcceEEecCCCC
Q psy9688 114 SNPCLNDCVCVDDGNLSFYCNCTEDFT--GEYCQFENSAACVT-LNPCQNNATCVASPG---EKQITCLCLKEV 181 (181)
Q Consensus 114 ~~~c~~~~~C~~~~~~~~~C~C~~g~~--g~~c~~~~~~~c~~-~~~C~~~~~C~~~~g---~~~~~C~C~~g~ 181 (181)
...|+.++.|.....+...|.|.+||+ |..|.......|+. ...|..++.|+.... +.+..|.|.+||
T Consensus 9 ~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 9 KKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD 82 (99)
T ss_dssp SCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred cCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence 345667788866456889999999998 44565322257876 245999999997753 235899999885
No 80
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.32 E-value=2.1e-05 Score=61.91 Aligned_cols=64 Identities=28% Similarity=0.805 Sum_probs=22.5
Q ss_pred CcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDC 121 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c~~~~ 121 (181)
.+.|.. +|.+ ++|++. +.|.|.+||+|..|+ ++.| .. +|.+++
T Consensus 392 ~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~~C~--~~~C-----------------------------~~-~C~~~g 434 (463)
T 2wg3_C 392 TSECSR-LCRN-GYCTPT---GKCCCSPGWEGDFCR--TAKC-----------------------------EP-ACRHGG 434 (463)
T ss_dssp CCHHHH-HCCS-EEECTT---SCEEECTTEESTTSC--EECC--------------------------------------
T ss_pred cccccC-CCCC-CccCCC---CeECCCCCcCCCcCC--cCcC-----------------------------CC-CCCCCC
Confidence 344532 4765 788653 389999999988885 2233 22 566667
Q ss_pred EEeeCCCCceEeecCCCCccCCccc
Q psy9688 122 VCVDDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 122 ~C~~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
+|+. . +.|.|.+||+|..|+.
T Consensus 435 ~C~~-~---~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 435 VCVR-P---NKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp -------------------------
T ss_pred EECC-C---CEEECCCCcccCCCCC
Confidence 7865 2 5899999999999985
No 81
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.24 E-value=0.00029 Score=40.59 Aligned_cols=27 Identities=26% Similarity=0.736 Sum_probs=23.3
Q ss_pred CCCCCCC-CCCCCCCCEEeeCCCCcceEEe
Q psy9688 148 NSAACVT-LNPCQNNATCVASPGEKQITCL 176 (181)
Q Consensus 148 ~~~~c~~-~~~C~~~~~C~~~~g~~~~~C~ 176 (181)
+|++|.. .++|..+++|+|++|+ |.|.
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gs--y~C~ 29 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGG--YLCL 29 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCC--EEEE
T ss_pred ccccccCCCCCCCCCCEeECCCCC--eEec
Confidence 7889975 4679888999999999 8898
No 82
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.21 E-value=0.00015 Score=39.09 Aligned_cols=31 Identities=29% Similarity=0.697 Sum_probs=26.2
Q ss_pred CCCCCCCEEec----CCCCeeEeCCCCCcCCCCCC
Q psy9688 48 DPCLGHGTCIN----RSDRYQCLCTPRYSGNNCEK 78 (181)
Q Consensus 48 ~~c~~~~~C~~----~~~~~~C~c~~g~~g~~c~~ 78 (181)
.||.++++|++ ..+.|.|.|++||+|..|+.
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 47999999986 34579999999999999973
No 83
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.17 E-value=0.00036 Score=46.97 Aligned_cols=29 Identities=31% Similarity=0.814 Sum_probs=23.9
Q ss_pred CCCCCCEEecCC--CCeeE-eCCCCCcCCCCC
Q psy9688 49 PCLGHGTCINRS--DRYQC-LCTPRYSGNNCE 77 (181)
Q Consensus 49 ~c~~~~~C~~~~--~~~~C-~c~~g~~g~~c~ 77 (181)
||.++++|+... +.++| .|+++|+|..|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce 33 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE 33 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc
Confidence 577888998654 56899 699999999997
No 84
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.15 E-value=0.00022 Score=55.01 Aligned_cols=108 Identities=19% Similarity=0.427 Sum_probs=26.4
Q ss_pred CCCC-CEEecCCCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccc---c-CCCCCCC--CCCCCCCCE
Q psy9688 50 CLGH-GTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWE---L-PEIRDCT--SNPCLNDCV 122 (181)
Q Consensus 50 c~~~-~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~---~-~~~~~c~--~~~c~~~~~ 122 (181)
|..+ ..|....+.+.|.|..++.|..|++-..-....++..+..+-........|. . .....|. ..+|.++++
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ngg~ 378 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQNGGT 378 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCCCCCC
Confidence 4433 4687666678999999999999984222221122222111000000000010 0 0012232 237888889
Q ss_pred EeeCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEeeCCCC
Q psy9688 123 CVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGE 170 (181)
Q Consensus 123 C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~ 170 (181)
|++ .. +|.|.+||.|..|+. ..|.++|+|....|.
T Consensus 379 C~~-~~---~C~C~~G~~G~~Ce~---------c~C~~~g~C~~~~Gq 413 (426)
T 3zyj_B 379 CHN-NV---RCLCPAAYTGILCEK---------LRCEEAGSCGSDSGQ 413 (426)
T ss_dssp ------------------------------------------------
T ss_pred cCC-CC---CCcCCCCCcCCCCcC---------CCCCCCCcccCCCCc
Confidence 976 44 899999999998862 356667777766654
No 85
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.10 E-value=0.00022 Score=38.41 Aligned_cols=31 Identities=32% Similarity=0.837 Sum_probs=23.8
Q ss_pred CCCCCCEEeeC---CCCceEeecCCCCccCCccc
Q psy9688 116 PCLNDCVCVDD---GNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 116 ~c~~~~~C~~~---~~~~~~C~C~~g~~g~~c~~ 146 (181)
||.++++|+.. ..+.|.|.|++||+|..|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 56777777640 24578999999999999975
No 86
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.10 E-value=7.2e-05 Score=58.83 Aligned_cols=51 Identities=31% Similarity=0.850 Sum_probs=21.8
Q ss_pred CCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 116 PCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 116 ~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+|.+ ++|+. . ++|.|.+||+|..|+ +..|.. +|.++++|++. +.|.|++||
T Consensus 398 ~C~n-G~C~~-~---~~C~C~~G~~G~~C~---~~~C~~--~C~~~g~C~~~-----~~C~C~~G~ 448 (463)
T 2wg3_C 398 LCRN-GYCTP-T---GKCCCSPGWEGDFCR---TAKCEP--ACRHGGVCVRP-----NKCLCKKGY 448 (463)
T ss_dssp HCCS-EEECT-T---SCEEECTTEESTTSC---EECC-----------------------------
T ss_pred CCCC-CccCC-C---CeECCCCCcCCCcCC---cCcCCC--CCCCCCEECCC-----CEEECCCCc
Confidence 4665 68864 2 379999999999995 356754 89999999854 459999987
No 87
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.09 E-value=0.0002 Score=48.07 Aligned_cols=42 Identities=19% Similarity=0.501 Sum_probs=33.8
Q ss_pred CCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCC
Q psy9688 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154 (181)
Q Consensus 110 ~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~ 154 (181)
+.|...+|..+++|++ ..+.|+|.|++||.|..|+ .+++|..
T Consensus 120 ~~c~~~~C~~~g~C~~-~~~~~~c~C~~g~~G~~Ce--~~~~c~~ 161 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLE-TIGNYTCSCYPGFYGPECE--YVRDDDD 161 (162)
T ss_dssp CCCCTTGGGGSEEEEE-CSSSEEEEECTTEESTTSC--EECC---
T ss_pred CCCcCCCCCCCCEEec-CCCCceEeCCCCCcCcccc--cCcccCC
Confidence 4666778998999999 8899999999999999998 4557754
No 88
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.04 E-value=0.00067 Score=36.47 Aligned_cols=30 Identities=23% Similarity=0.537 Sum_probs=24.1
Q ss_pred CCCCCCCC---------CCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 148 NSAACVTL---------NPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 148 ~~~~c~~~---------~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+|++|... .+|.+ +|+++.|+ |.|.|++||
T Consensus 3 DidEC~~~~~~~~~~~~~~C~~--~C~n~~Gs--y~C~C~~Gy 41 (53)
T 1apq_A 3 DLDECASRSKSGEEDPQPQCQH--LCHNYVGG--YFCSCRPGY 41 (53)
T ss_dssp SCCTTTCSTTTCCCSSSCTTSS--EEEEETTE--EEEECSTTC
T ss_pred ccccccCcccccccccCCCCCC--EeECCCCC--eEEECCCCC
Confidence 67777641 56864 99999999 899999997
No 89
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=97.00 E-value=0.00039 Score=55.53 Aligned_cols=85 Identities=20% Similarity=0.405 Sum_probs=24.3
Q ss_pred CcCCCCCCCCCCCEEecC----CCCeeEeCCCCCcCCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCINR----SDRYQCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPC 117 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~~----~~~~~C~c~~g~~g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~~c 117 (181)
...|.+-+|...+.|.+. ...+.|.|++||.|..|+. |.+..-. . ...++.|..-+|
T Consensus 435 ~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~----C~~G~~g------------~---~~~~~~C~~C~C 495 (525)
T 4aqs_A 435 PYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ----CLPQHWG------------L---SNDLDGCRPCDC 495 (525)
T ss_dssp TTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------------------------------------
T ss_pred CCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc----CCCCccC------------C---CCCCCCCcCCCC
Confidence 344555566666655432 2345899999999999962 3221100 0 002344555556
Q ss_pred CCCCEEeeC-CCCceEeecCCCCccCCcc
Q psy9688 118 LNDCVCVDD-GNLSFYCNCTEDFTGEYCQ 145 (181)
Q Consensus 118 ~~~~~C~~~-~~~~~~C~C~~g~~g~~c~ 145 (181)
.+.+.+... ....++|.|++||+|..|+
T Consensus 496 ~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 496 DLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp -----------------------------
T ss_pred CCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 555544320 1233479999999999885
No 90
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.98 E-value=0.00061 Score=36.64 Aligned_cols=24 Identities=33% Similarity=0.720 Sum_probs=20.6
Q ss_pred CCCCCCCEEecCCCCeeEeCCCCCcC
Q psy9688 48 DPCLGHGTCINRSDRYQCLCTPRYSG 73 (181)
Q Consensus 48 ~~c~~~~~C~~~~~~~~C~c~~g~~g 73 (181)
.+|. +.|++..++|.|.|++||.+
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYEL 43 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEE
T ss_pred CCCC--CEeECCCCCeEEECCCCCeE
Confidence 4575 48999999999999999974
No 91
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=96.96 E-value=0.004 Score=38.11 Aligned_cols=68 Identities=22% Similarity=0.457 Sum_probs=49.3
Q ss_pred CCCCCCCCCCCEEeeCCCCceEeecCCCCc--cCCccccCCCC-CCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 111 DCTSNPCLNDCVCVDDGNLSFYCNCTEDFT--GEYCQFENSAA-CVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 111 ~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~--g~~c~~~~~~~-c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
.|....|..++.|.....+...|.|..||+ |..|.. +.. |.. ...|..++.|+.+.. .+..|.|.++|
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~--~Np~C~~nNGGCd~nAeC~~~~~-~ki~C~C~~~~ 83 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVP--ASITCEENNGGCAPEAECTMDDK-KEVECKCTKEG 83 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEE--CCCCTTSGGGGSCTTSEEEECTT-SCEEEECCSTT
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEE--CCcchhhcCCCcCCCcEeEECCC-CEEEeECCCCC
Confidence 343445677788876567888999999998 556764 355 765 345999999997752 35899998874
No 92
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.95 E-value=0.0013 Score=42.01 Aligned_cols=32 Identities=34% Similarity=0.946 Sum_probs=27.1
Q ss_pred CCCCCCEEecCC--CCe-eEeCCCCCcCCCCCCCC
Q psy9688 49 PCLGHGTCINRS--DRY-QCLCTPRYSGNNCEKDN 80 (181)
Q Consensus 49 ~c~~~~~C~~~~--~~~-~C~c~~g~~g~~c~~~~ 80 (181)
||.++++|++.. ..+ .|.|++||+|..|++++
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~ 36 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK 36 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEES
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccC
Confidence 789999999874 445 99999999999998655
No 93
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.85 E-value=0.00036 Score=38.46 Aligned_cols=30 Identities=30% Similarity=0.778 Sum_probs=25.3
Q ss_pred CCCCCCEEec----CCCCeeEeCCCCCcCCCCCC
Q psy9688 49 PCLGHGTCIN----RSDRYQCLCTPRYSGNNCEK 78 (181)
Q Consensus 49 ~c~~~~~C~~----~~~~~~C~c~~g~~g~~c~~ 78 (181)
+|.++++|+. ..+.|.|.|++||+|..|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 7999999983 34468999999999999984
No 94
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.83 E-value=0.00053 Score=55.03 Aligned_cols=38 Identities=47% Similarity=0.995 Sum_probs=34.7
Q ss_pred CcCCCCCCCCCCCEEec-CCCCeeEeCC-CCCcCCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCIN-RSDRYQCLCT-PRYSGNNCEKD 79 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~-~~~~~~C~c~-~g~~g~~c~~~ 79 (181)
+++|.+.||.++++|++ ..+.|.|.|. +||+|..|+..
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 57899999999999999 8889999999 99999999853
No 95
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.70 E-value=0.00092 Score=36.35 Aligned_cols=30 Identities=23% Similarity=0.610 Sum_probs=24.0
Q ss_pred CEEeeCCCCceEeecCCCCc----cCCccccCCCCCC
Q psy9688 121 CVCVDDGNLSFYCNCTEDFT----GEYCQFENSAACV 153 (181)
Q Consensus 121 ~~C~~~~~~~~~C~C~~g~~----g~~c~~~~~~~c~ 153 (181)
..|++ +.++|+|.|++||. +..|. ++++|.
T Consensus 13 ~~C~n-t~Gsy~C~C~~Gy~L~~d~~~C~--didec~ 46 (55)
T 2jkh_L 13 QFCHE-EQNSVVCSCARGYTLADNGKACI--PTGPYP 46 (55)
T ss_dssp SEEEE-ETTEEEEECCTTEEECTTSSCEE--ESSSSC
T ss_pred cEeEc-CCCCeEEeCCCCCEECCCCCeec--cCcccc
Confidence 38999 89999999999996 56676 666653
No 96
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.66 E-value=0.00063 Score=37.02 Aligned_cols=38 Identities=24% Similarity=0.620 Sum_probs=27.6
Q ss_pred cCCCC--CCCCCCCEEecCCCCeeEeCCCCCc----CCCCCCCCCCC
Q psy9688 43 DHCLT--DPCLGHGTCINRSDRYQCLCTPRYS----GNNCEKDNGDC 83 (181)
Q Consensus 43 ~~c~~--~~c~~~~~C~~~~~~~~C~c~~g~~----g~~c~~~~~~c 83 (181)
|+|.. .+|. ..|+|..++|.|.|++||. +..|. ++++|
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~-didec 45 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACI-PTGPY 45 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEE-ESSSS
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeec-cCccc
Confidence 45543 3465 3899999999999999997 55665 56555
No 97
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.63 E-value=0.0011 Score=53.41 Aligned_cols=37 Identities=35% Similarity=1.018 Sum_probs=32.9
Q ss_pred CcCCCCCCCCCCCEEec-CCCCeeEeCC-CCCcCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCIN-RSDRYQCLCT-PRYSGNNCEK 78 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~-~~~~~~C~c~-~g~~g~~c~~ 78 (181)
+++|.+.||.++++|++ ..+.|.|.|. +||+|..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 47899999999999995 5578999999 9999999984
No 98
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.49 E-value=0.0012 Score=36.26 Aligned_cols=31 Identities=32% Similarity=0.837 Sum_probs=24.7
Q ss_pred CCCCCCEEeeC---CCCceEeecCCCCccCCccc
Q psy9688 116 PCLNDCVCVDD---GNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 116 ~c~~~~~C~~~---~~~~~~C~C~~g~~g~~c~~ 146 (181)
+|.++++|... ....|.|.|++||+|..|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcc
Confidence 78888899731 23468999999999999985
No 99
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=96.35 E-value=0.0022 Score=42.98 Aligned_cols=41 Identities=29% Similarity=0.681 Sum_probs=33.0
Q ss_pred CcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDC 83 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~~~c 83 (181)
...|.+.+|..++.|++..+.|.|.|.+||.|..|+ .+.+|
T Consensus 119 ~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~-~~~~c 159 (164)
T 3cfw_A 119 TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ-FVQVD 159 (164)
T ss_dssp ECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC-BC---
T ss_pred cCCCCCCcCCCCCeecccCCCceeeeCCCccccccc-ccccC
Confidence 345667889999999999889999999999999998 44455
No 100
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.34 E-value=0.0024 Score=36.40 Aligned_cols=40 Identities=23% Similarity=0.537 Sum_probs=27.7
Q ss_pred CCCCCCCC--CCCCCCEEeeCCCC-ceEeecCCCCc----cCCccccCCCCC
Q psy9688 108 EIRDCTSN--PCLNDCVCVDDGNL-SFYCNCTEDFT----GEYCQFENSAAC 152 (181)
Q Consensus 108 ~~~~c~~~--~c~~~~~C~~~~~~-~~~C~C~~g~~----g~~c~~~~~~~c 152 (181)
++++|... .|. ..|++ ..+ +|.|.|++||. ++.|. ++++|
T Consensus 4 d~~eC~~~nggC~--h~C~n-~~g~s~~C~C~~Gy~L~~D~~tC~--d~dec 50 (69)
T 1kli_L 4 DQLICVNENGGCE--QYCSD-HTGTKRSCRCHEGYSLLADGVSCT--PTVEY 50 (69)
T ss_dssp CCCCTTSGGGGCS--SEEEE-ETTTEEEEECCTTEEECTTSSCEE--ECSSS
T ss_pred ccccccCCCCCcC--CEeEc-CCCCCEEEeCCCCCeECCCCCccc--Ccccc
Confidence 44555432 243 48988 787 89999999996 56676 66665
No 101
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=96.29 E-value=0.00082 Score=44.68 Aligned_cols=39 Identities=36% Similarity=0.958 Sum_probs=33.6
Q ss_pred cCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCC
Q psy9688 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79 (181)
Q Consensus 41 ~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~ 79 (181)
+.+.|...||.+++.|.+....|.|.|.+||+|..|+++
T Consensus 118 e~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 118 YTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp EECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 346677788988899999989999999999999999854
No 102
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.23 E-value=0.0035 Score=35.94 Aligned_cols=23 Identities=35% Similarity=0.694 Sum_probs=11.2
Q ss_pred CCCCCEEecCCCCeeEe-CCCCCc
Q psy9688 50 CLGHGTCINRSDRYQCL-CTPRYS 72 (181)
Q Consensus 50 c~~~~~C~~~~~~~~C~-c~~g~~ 72 (181)
|...++|+|..++|.|. +..||.
T Consensus 13 C~~~~~C~Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 13 CKGEMKCINHYGGYLCLPRSAAVI 36 (71)
T ss_dssp CTTEEEEEETTCCEEEEETTSCCC
T ss_pred CCCCCEeECCCCCeEecccCCccc
Confidence 44444555555555554 333443
No 103
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.18 E-value=0.0019 Score=36.81 Aligned_cols=41 Identities=22% Similarity=0.599 Sum_probs=28.7
Q ss_pred ccCcCCCCC--CCCCCCEEecCCC-CeeEeCCCCCc----CCCCCCCCCCC
Q psy9688 40 SKVDHCLTD--PCLGHGTCINRSD-RYQCLCTPRYS----GNNCEKDNGDC 83 (181)
Q Consensus 40 ~~~~~c~~~--~c~~~~~C~~~~~-~~~C~c~~g~~----g~~c~~~~~~c 83 (181)
.++++|... .|. ..|++..+ +|.|.|++||. ++.|. +++++
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~-d~dec 50 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 50 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCccc-Ccccc
Confidence 356677542 354 47999888 79999999997 55665 55555
No 104
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.14 E-value=0.00094 Score=48.75 Aligned_cols=41 Identities=24% Similarity=0.706 Sum_probs=30.8
Q ss_pred ccCcCCC--CCCCCCCCEEecCCCCeeEeCCCCCc--CCCCCCCCC
Q psy9688 40 SKVDHCL--TDPCLGHGTCINRSDRYQCLCTPRYS--GNNCEKDNG 81 (181)
Q Consensus 40 ~~~~~c~--~~~c~~~~~C~~~~~~~~C~c~~g~~--g~~c~~~~~ 81 (181)
.++|+|. ..+|..++.|+|..++|.|.|.+||. |..|. +++
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~-d~d 47 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV-AEG 47 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE-ETT
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC-CCC
Confidence 3567775 46788889999999999999999998 66776 444
No 105
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.04 E-value=0.0041 Score=50.16 Aligned_cols=37 Identities=41% Similarity=0.908 Sum_probs=31.3
Q ss_pred CCCCCCCCCCCCEEeeCCCCceEeecC-CCCccCCccc
Q psy9688 110 RDCTSNPCLNDCVCVDDGNLSFYCNCT-EDFTGEYCQF 146 (181)
Q Consensus 110 ~~c~~~~c~~~~~C~~~~~~~~~C~C~-~g~~g~~c~~ 146 (181)
++|.+.||.++++|++...+.|.|.|. +||+|.+|+.
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 578888999999998413478999999 9999999975
No 106
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.92 E-value=0.002 Score=46.99 Aligned_cols=41 Identities=24% Similarity=0.684 Sum_probs=31.0
Q ss_pred CCCCCC--CCCCCCCCEEeeCCCCceEeecCCCCc--cCCccccCCCC
Q psy9688 108 EIRDCT--SNPCLNDCVCVDDGNLSFYCNCTEDFT--GEYCQFENSAA 151 (181)
Q Consensus 108 ~~~~c~--~~~c~~~~~C~~~~~~~~~C~C~~g~~--g~~c~~~~~~~ 151 (181)
++++|. ..+|..++.|++ ..++|.|.|.+||. |..|. +++.
T Consensus 4 DiDEC~~~~~~C~~~a~C~N-t~Gsy~C~C~~Gy~GnG~~C~--d~d~ 48 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECRD-YATGFCCRCVANYTGNGRQCV--AEGS 48 (285)
T ss_dssp ---CHHHHGGGSCTTEEEEE-CSSCEEEEECTTEEECSSSEE--ETTC
T ss_pred cchhccCCCCCCCCCCEeEc-CCCCeEEEcCCCCCCCCCcCC--CCCC
Confidence 567776 457888899999 99999999999998 66676 4444
No 107
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=95.86 E-value=0.0043 Score=49.82 Aligned_cols=38 Identities=29% Similarity=0.837 Sum_probs=32.2
Q ss_pred CCCCCCCCCCCCCEEeeCCCCceEeecC-CCCccCCccc
Q psy9688 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCT-EDFTGEYCQF 146 (181)
Q Consensus 109 ~~~c~~~~c~~~~~C~~~~~~~~~C~C~-~g~~g~~c~~ 146 (181)
++.|.+.||.++++|++...+.|.|.|. +||+|.+|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 4678888999999998623678999999 9999999975
No 108
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=95.75 E-value=0.0085 Score=40.00 Aligned_cols=41 Identities=24% Similarity=0.524 Sum_probs=31.1
Q ss_pred CCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccccCCCCCCC
Q psy9688 111 DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSAACVT 154 (181)
Q Consensus 111 ~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~~c~~ 154 (181)
.|...+|..+++|++ ..+.|.|.|.+||.|..|+ .+.+|.+
T Consensus 121 ~~~~~~C~~~g~C~~-~~~~~~c~C~~g~~g~~C~--~~~~c~~ 161 (164)
T 3cfw_A 121 SCQPWSCSGHGECVE-IINNYTCNCDVGYYGPQCQ--FVQVDPR 161 (164)
T ss_dssp CCCTTSSCSSEEEEE-ETTEEEEEECTTCBSSSSC--BC-----
T ss_pred CCCCCcCCCCCeecc-cCCCceeeeCCCccccccc--ccccCcc
Confidence 455578999999998 7889999999999999997 5666643
No 109
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.72 E-value=0.016 Score=36.89 Aligned_cols=36 Identities=33% Similarity=0.984 Sum_probs=26.7
Q ss_pred CCCCCCEEeeCCC--Cce-EeecCCCCccCCccccCCC-CCC
Q psy9688 116 PCLNDCVCVDDGN--LSF-YCNCTEDFTGEYCQFENSA-ACV 153 (181)
Q Consensus 116 ~c~~~~~C~~~~~--~~~-~C~C~~g~~g~~c~~~~~~-~c~ 153 (181)
||.++++|++ .. ..+ .|.|++||+|+.|+. +++ .|.
T Consensus 2 pC~nggtC~~-~~~~~~~~~C~Cp~g~~G~~Ce~-~~~~~C~ 41 (122)
T 2fd6_A 2 DCLNGGTCVS-NKYFSNIHWCNCPKKFGGQHCEI-DKSKTCY 41 (122)
T ss_dssp CCCSSCEEEE-CTTTTTCEEEECCTTEESTTSCE-ESSCCSB
T ss_pred CCCCcCCcCC-CcccCCCCCccCCCCCCCccccc-cCcCCCc
Confidence 5788888977 53 445 899999999999986 333 454
No 110
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=95.18 E-value=0.0068 Score=32.25 Aligned_cols=28 Identities=14% Similarity=0.584 Sum_probs=22.4
Q ss_pred EEeeCCCCceEeecCCCCc----cCCccccCCCCC
Q psy9688 122 VCVDDGNLSFYCNCTEDFT----GEYCQFENSAAC 152 (181)
Q Consensus 122 ~C~~~~~~~~~C~C~~g~~----g~~c~~~~~~~c 152 (181)
.|++ ..++|+|.|++||. +..|. +++++
T Consensus 11 ~C~n-~~gs~~C~C~~Gy~L~~d~~tC~--dide~ 42 (51)
T 1kig_L 11 FCRE-ERSEVRCSCAHGYVLGDDSKSCV--STERF 42 (51)
T ss_dssp CCCE-ETTEECCCCCTTEEECTTSSCEE--ECSSS
T ss_pred EeEc-CCCCeEEeCCCCcEECCCCCccc--cCCcc
Confidence 6888 88999999999996 56676 66664
No 111
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=95.18 E-value=0.013 Score=31.06 Aligned_cols=30 Identities=30% Similarity=0.832 Sum_probs=23.7
Q ss_pred CCCCCCCEEe--cCCCCeeEeCCCCCcCCCCCC
Q psy9688 48 DPCLGHGTCI--NRSDRYQCLCTPRYSGNNCEK 78 (181)
Q Consensus 48 ~~c~~~~~C~--~~~~~~~C~c~~g~~g~~c~~ 78 (181)
..|.+ |+|. ...+.+.|+|++||+|.+|+.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 55777 6885 445568999999999999983
No 112
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=95.18 E-value=0.0079 Score=35.01 Aligned_cols=35 Identities=34% Similarity=0.891 Sum_probs=25.6
Q ss_pred CcCCC---CCCCCCCCEEe--cCCCCeeEeCCCCCcCCCCC
Q psy9688 42 VDHCL---TDPCLGHGTCI--NRSDRYQCLCTPRYSGNNCE 77 (181)
Q Consensus 42 ~~~c~---~~~c~~~~~C~--~~~~~~~C~c~~g~~g~~c~ 77 (181)
.++|. ...|.++ .|+ ...+.+.|.|.+||+|..|+
T Consensus 37 ~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp --CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred CCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 35665 4678875 895 33456899999999999997
No 113
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.00 E-value=0.014 Score=31.30 Aligned_cols=29 Identities=24% Similarity=0.566 Sum_probs=22.9
Q ss_pred CEEeeCCCC-ceEeecCCCCc----cCCccccCCCCC
Q psy9688 121 CVCVDDGNL-SFYCNCTEDFT----GEYCQFENSAAC 152 (181)
Q Consensus 121 ~~C~~~~~~-~~~C~C~~g~~----g~~c~~~~~~~c 152 (181)
..|++ ..+ +|+|.|++||. ++.|. ++++|
T Consensus 11 ~~C~n-~~ggs~~C~C~~Gy~L~~Dg~tC~--d~dec 44 (53)
T 2bz6_L 11 QYCSD-HTGTKRSCRCHEGYSLLADGVSCT--PTVEY 44 (53)
T ss_dssp SEEEE-ETTTEEEEECCTTEEECTTSSCEE--ECSSS
T ss_pred CEeEc-CCCCCEEeeCCCCCEECCCCCccc--CCccc
Confidence 37888 777 79999999996 56676 66665
No 114
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=94.94 E-value=0.05 Score=33.00 Aligned_cols=69 Identities=25% Similarity=0.693 Sum_probs=43.6
Q ss_pred CCCCCCCCCCEEec-CCCCeeEeCCCCCc--CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCC--CCCC
Q psy9688 45 CLTDPCLGHGTCIN-RSDRYQCLCTPRYS--GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSN--PCLN 119 (181)
Q Consensus 45 c~~~~c~~~~~C~~-~~~~~~C~c~~g~~--g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~--~c~~ 119 (181)
|....|..++.|.+ ..+...|+|.+||. |..|.... ...|+.. -|..
T Consensus 7 C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~----------------------------~~sC~~nNGGCd~ 58 (99)
T 1ob1_C 7 CVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENP----------------------------NPTCNENNGGCDA 58 (99)
T ss_dssp CCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECS----------------------------CCCSTTGGGGCCT
T ss_pred eccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCC----------------------------CCChhhcCCCcCC
Confidence 44556777888886 46688999999998 44444211 1233321 2556
Q ss_pred CCEEeeCCC----CceEeecCCCCcc
Q psy9688 120 DCVCVDDGN----LSFYCNCTEDFTG 141 (181)
Q Consensus 120 ~~~C~~~~~----~~~~C~C~~g~~g 141 (181)
++.|+.... +...|.|.+||+-
T Consensus 59 nA~C~~~~~~~~~~ki~C~C~~g~~~ 84 (99)
T 1ob1_C 59 DAKCTEEDSGSNGKKITCECTKPDSY 84 (99)
T ss_dssp TEEEECCSCSSSSCCCEEEECSTTCC
T ss_pred CceeEecCCcccCCceEeEeCCCCcc
Confidence 667765222 5678999999763
No 115
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=94.94 E-value=0.0092 Score=32.02 Aligned_cols=29 Identities=24% Similarity=0.652 Sum_probs=22.8
Q ss_pred CEEecCCC-CeeEeCCCCCc----CCCCCCCCCCC
Q psy9688 54 GTCINRSD-RYQCLCTPRYS----GNNCEKDNGDC 83 (181)
Q Consensus 54 ~~C~~~~~-~~~C~c~~g~~----g~~c~~~~~~c 83 (181)
..|++..+ +|.|.|++||. ++.|. ++++|
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~-d~dec 44 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSCT-PTVEY 44 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEE-ECSSS
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCccc-CCccc
Confidence 36999888 69999999997 56665 56655
No 116
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=94.91 E-value=0.037 Score=29.25 Aligned_cols=29 Identities=28% Similarity=0.830 Sum_probs=23.0
Q ss_pred CCCCCCCEEe--cCCCCeeEeCCCCCcCCCCC
Q psy9688 48 DPCLGHGTCI--NRSDRYQCLCTPRYSGNNCE 77 (181)
Q Consensus 48 ~~c~~~~~C~--~~~~~~~C~c~~g~~g~~c~ 77 (181)
..|.+ ++|. ...+.+.|+|+.||+|.+|+
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCccccccc
Confidence 45666 5886 45557899999999999997
No 117
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=94.88 E-value=0.0091 Score=39.49 Aligned_cols=36 Identities=28% Similarity=0.743 Sum_probs=31.2
Q ss_pred CCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccc
Q psy9688 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 110 ~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
..|...||..++.|.+ ....|.|.|.+||.|..|+.
T Consensus 120 ~~~~~~pc~~~g~C~~-~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 120 AACTNTSCSGHGECVE-TINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp CCCCTTGGGGSEEEEE-ETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCCEeec-CCCCeeEECCCCccCccccc
Confidence 4566678888899999 88999999999999999974
No 118
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=94.87 E-value=0.033 Score=29.44 Aligned_cols=29 Identities=34% Similarity=0.856 Sum_probs=23.2
Q ss_pred CCCCCCCEEec--CCCCeeEeCCCCCcCCCCC
Q psy9688 48 DPCLGHGTCIN--RSDRYQCLCTPRYSGNNCE 77 (181)
Q Consensus 48 ~~c~~~~~C~~--~~~~~~C~c~~g~~g~~c~ 77 (181)
..|.++ +|.. ..+.+.|.|++||+|.+|+
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 457765 8874 3457899999999999997
No 119
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=94.81 E-value=0.0071 Score=32.19 Aligned_cols=28 Identities=18% Similarity=0.552 Sum_probs=22.1
Q ss_pred EEecCCCCeeEeCCCCCc----CCCCCCCCCCC
Q psy9688 55 TCINRSDRYQCLCTPRYS----GNNCEKDNGDC 83 (181)
Q Consensus 55 ~C~~~~~~~~C~c~~g~~----g~~c~~~~~~c 83 (181)
.|++..++|.|.|++||. ++.|. +++++
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~-dide~ 42 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCV-STERF 42 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEE-ECSSS
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccc-cCCcc
Confidence 688889999999999997 55665 55554
No 120
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=94.58 E-value=0.021 Score=30.23 Aligned_cols=31 Identities=23% Similarity=0.530 Sum_probs=22.8
Q ss_pred CCCCCCEEe-eCCCCceEeecCCCCccCCcccc
Q psy9688 116 PCLNDCVCV-DDGNLSFYCNCTEDFTGEYCQFE 147 (181)
Q Consensus 116 ~c~~~~~C~-~~~~~~~~C~C~~g~~g~~c~~~ 147 (181)
.|.+ ++|. ....+.+.|.|++||+|+.|+..
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred cccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 4566 5674 11556789999999999999853
No 121
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=93.95 E-value=0.071 Score=36.36 Aligned_cols=32 Identities=31% Similarity=0.811 Sum_probs=26.0
Q ss_pred cCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCC
Q psy9688 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEK 78 (181)
Q Consensus 43 ~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~ 78 (181)
..| ..+|.++|.|+. ...|.|++||.|..|+.
T Consensus 149 ~~C-~~~C~ngG~Cv~---P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 149 AEC-PGGCRNGGFCNE---RRICECPDGFHGPHCEG 180 (188)
T ss_dssp CCC-TTCCCTTCEECT---TSCEECCTTCBTTTTCB
T ss_pred Ccc-CCCCCCCCEeCC---CCcccCcCCCCCCCCcC
Confidence 456 368999999964 34999999999999973
No 122
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=93.92 E-value=0.25 Score=30.21 Aligned_cols=68 Identities=19% Similarity=0.511 Sum_probs=45.2
Q ss_pred CCCCCCCCCCCEEec-CCCCeeEeCCCCCc--CCCCCCCCCCCCCCCCCCCcEEeeCCeeccccccCCCCCCCCC--CCC
Q psy9688 44 HCLTDPCLGHGTCIN-RSDRYQCLCTPRYS--GNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSN--PCL 118 (181)
Q Consensus 44 ~c~~~~c~~~~~C~~-~~~~~~C~c~~g~~--g~~c~~~~~~c~~~~c~~~~~C~~~~~~g~~c~~~~~~~c~~~--~c~ 118 (181)
.|...-|..++.|.. ..+...|+|..||. |..|... +. .|..+ -|.
T Consensus 12 ~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np----------------------------~C~~nNGGCd 62 (105)
T 1n1i_A 12 KCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SI----------------------------TCEENNGGCA 62 (105)
T ss_dssp SCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CC----------------------------CTTSGGGGSC
T ss_pred EecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-Cc----------------------------chhhcCCCcC
Confidence 455556778888987 66788999999998 4444421 22 12221 366
Q ss_pred CCCEEeeCCCCceEeecCCCCc
Q psy9688 119 NDCVCVDDGNLSFYCNCTEDFT 140 (181)
Q Consensus 119 ~~~~C~~~~~~~~~C~C~~g~~ 140 (181)
..+.|+........|.|..+|+
T Consensus 63 ~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 63 PEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp TTSEEEECTTSCEEEECCSTTC
T ss_pred CCcEeEECCCCEEEeECCCCCC
Confidence 6788876233678899999875
No 123
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=93.85 E-value=0.054 Score=41.71 Aligned_cols=38 Identities=29% Similarity=0.820 Sum_probs=33.3
Q ss_pred CcCCCCCCCCCCCEEecCCCCeeEeCCC-CCcCCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCINRSDRYQCLCTP-RYSGNNCEKD 79 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~~~~~~~C~c~~-g~~g~~c~~~ 79 (181)
.+.|.+.||.++++|+...+.|.|.|.. +|.|..|+..
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 3678889999999999988899999996 9999999743
No 124
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.43 E-value=0.023 Score=38.26 Aligned_cols=40 Identities=20% Similarity=0.488 Sum_probs=28.8
Q ss_pred CCCccCCccccCCCCCCCC-C---CCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 137 EDFTGEYCQFENSAACVTL-N---PCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 137 ~g~~g~~c~~~~~~~c~~~-~---~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
.||.+..... ++++|... . .|.+ .|+++.|+ |.|.|++||
T Consensus 113 ~Gf~~~~~~~-di~eC~~~~~~~~~C~~--~C~n~~g~--~~C~C~~Gy 156 (170)
T 1szb_A 113 TGFEAFYAAE-DIDECQVAPGEAPTCDH--HCHNHLGG--FYCSCRAGY 156 (170)
T ss_dssp CEEEEEEEEE-ECCTTCCCTTSCCSSSS--EEEEETTE--EEEECCTTE
T ss_pred cCceeeeecc-ccCcccCCCCCCCccCC--ccccCCCC--EEEeCCCCc
Confidence 5665544333 67888762 2 2766 89999998 889999987
No 125
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=92.97 E-value=0.1 Score=40.15 Aligned_cols=38 Identities=29% Similarity=0.753 Sum_probs=33.1
Q ss_pred CCCCCCCCCCCCCCEEeeCCCCceEeecCC-CCccCCccc
Q psy9688 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTE-DFTGEYCQF 146 (181)
Q Consensus 108 ~~~~c~~~~c~~~~~C~~~~~~~~~C~C~~-g~~g~~c~~ 146 (181)
..+.|...||.++++|++ ....|.|.|.. +|.|+.|+.
T Consensus 184 ~~~~C~~~pC~n~g~C~~-~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 184 PSTTCQEDSCSNQGVCLQ-QWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CSSCCCTTSSSTTCEEEE-CSSSEEEECTTTSEESTTSCE
T ss_pred CCCCcccccCCCCCEecC-CCCCceEeccCCcccCCCCCC
Confidence 346788889999999999 88999999996 999999974
No 126
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=92.85 E-value=0.068 Score=35.73 Aligned_cols=30 Identities=23% Similarity=0.678 Sum_probs=22.5
Q ss_pred CCCCCCEEeeCCC--CceEe-ecCCCCccCCccc
Q psy9688 116 PCLNDCVCVDDGN--LSFYC-NCTEDFTGEYCQF 146 (181)
Q Consensus 116 ~c~~~~~C~~~~~--~~~~C-~C~~g~~g~~c~~ 146 (181)
+|.++++|.. .. +.++| .|+++|+|.+|+.
T Consensus 2 ~C~~~g~C~~-~~~~g~~~C~~C~~g~~G~~Ce~ 34 (162)
T 1klo_A 2 PCPGGSSCAI-VPKTKEVVCTHCPTGTAGKRCEL 34 (162)
T ss_dssp CSCTTCCEEE-CSSSCCEEECSCCTTEESTTSCE
T ss_pred cCcCcCcccc-cCCCCCEEeCCCCCCCcCCCCcC
Confidence 4667778865 43 56889 7999999988863
No 127
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.84 E-value=0.092 Score=34.43 Aligned_cols=33 Identities=33% Similarity=0.922 Sum_probs=26.8
Q ss_pred CCCCCCEEecCC--CCe-eEeCCCCCcCCCCCCCCC
Q psy9688 49 PCLGHGTCINRS--DRY-QCLCTPRYSGNNCEKDNG 81 (181)
Q Consensus 49 ~c~~~~~C~~~~--~~~-~C~c~~g~~g~~c~~~~~ 81 (181)
||.++++|+... ..+ .|.|++||.|..|+++++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~ 49 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS 49 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESS
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceecccc
Confidence 799999998752 345 899999999999986543
No 128
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=92.50 E-value=0.2 Score=27.33 Aligned_cols=24 Identities=25% Similarity=0.728 Sum_probs=19.3
Q ss_pred CEEeeCCC-CceEeecCCCCc----cCCcc
Q psy9688 121 CVCVDDGN-LSFYCNCTEDFT----GEYCQ 145 (181)
Q Consensus 121 ~~C~~~~~-~~~~C~C~~g~~----g~~c~ 145 (181)
..|++ .. ++|.|.|++||. ++.|.
T Consensus 11 ~~C~n-~~~gs~~C~C~~Gy~L~~D~~tC~ 39 (59)
T 2wph_E 11 QFCKN-SADNKVVCSCTEGYRLAENQKSCE 39 (59)
T ss_dssp SEEEE-CSTTCEEEECCTTEEECTTSSCEE
T ss_pred CEeEe-CCCCCEEeeCCCCcEECCCCCccc
Confidence 37888 77 699999999996 55665
No 129
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=92.14 E-value=0.88 Score=27.11 Aligned_cols=68 Identities=21% Similarity=0.408 Sum_probs=47.3
Q ss_pred CCCCCCCCCCEEeeCCCCceEeecCCCCc--cCCccccCCCCCCC-CCCCCCCCEEeeCCCCcceEEecCCC
Q psy9688 112 CTSNPCLNDCVCVDDGNLSFYCNCTEDFT--GEYCQFENSAACVT-LNPCQNNATCVASPGEKQITCLCLKE 180 (181)
Q Consensus 112 c~~~~c~~~~~C~~~~~~~~~C~C~~g~~--g~~c~~~~~~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g 180 (181)
|....|+.++.|..-..+.-.|.|..+|. +..|.......|.. ...|...+.|..... .+..|.|...
T Consensus 7 C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV~~~~~~C~~NNGGCd~nA~C~~~~~-~kIvC~C~~~ 77 (95)
T 1b9w_A 7 CIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCVPAPNMTCKDKNGGCAPEAECKMNDK-NEIVCKCTKE 77 (95)
T ss_dssp CSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEEECTTCCTTTGGGGSCTTSEEEECTT-SCEEEECCST
T ss_pred cccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEEcCCCCCccccCCCcCCCcceeecCC-CcEEEECCCC
Confidence 33345677788876234677899999997 66676423346766 346999999987772 3588999765
No 130
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=92.05 E-value=0.1 Score=28.46 Aligned_cols=22 Identities=23% Similarity=0.709 Sum_probs=17.8
Q ss_pred CCCCCCCEEeeCC-CCcceEEecCCCC
Q psy9688 156 NPCQNNATCVASP-GEKQITCLCLKEV 181 (181)
Q Consensus 156 ~~C~~~~~C~~~~-g~~~~~C~C~~g~ 181 (181)
..|.+ .|++++ |+ |.|.|++||
T Consensus 7 ggC~~--~C~n~~~gs--~~C~C~~Gy 29 (59)
T 2wph_E 7 GRCEQ--FCKNSADNK--VVCSCTEGY 29 (59)
T ss_dssp GGCSS--EEEECSTTC--EEEECCTTE
T ss_pred CCcCC--EeEeCCCCC--EEeeCCCCc
Confidence 34655 899999 57 889999987
No 131
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.91 E-value=0.075 Score=30.87 Aligned_cols=31 Identities=23% Similarity=0.530 Sum_probs=21.9
Q ss_pred CCCCCCCEEee-CCCCceEeecCCCCccCCccc
Q psy9688 115 NPCLNDCVCVD-DGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 115 ~~c~~~~~C~~-~~~~~~~C~C~~g~~g~~c~~ 146 (181)
..|.++ +|.. ...+.+.|.|.+||+|..|+.
T Consensus 46 ~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 456664 7732 034567899999999999963
No 132
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=91.70 E-value=0.21 Score=32.73 Aligned_cols=30 Identities=37% Similarity=0.978 Sum_probs=23.8
Q ss_pred CCCCCCEEeeCC--CCce-EeecCCCCccCCccc
Q psy9688 116 PCLNDCVCVDDG--NLSF-YCNCTEDFTGEYCQF 146 (181)
Q Consensus 116 ~c~~~~~C~~~~--~~~~-~C~C~~g~~g~~c~~ 146 (181)
||.++++|+. . ...+ .|.|++||.|+.|+.
T Consensus 14 pC~NGGtC~~-~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 14 DCLNGGTCVS-NKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCTTCEEEE-CSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCcCC-CccccCCccccCCCCCCCCceec
Confidence 7888888876 4 2345 799999999999975
No 133
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=91.49 E-value=0.21 Score=26.31 Aligned_cols=30 Identities=23% Similarity=0.608 Sum_probs=21.8
Q ss_pred CCCCCCEEe-eCCCCceEeecCCCCccCCccc
Q psy9688 116 PCLNDCVCV-DDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 116 ~c~~~~~C~-~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
.|.+ ++|. ....+.+.|.|+.||+|..|+.
T Consensus 19 yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 19 FCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp TCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred cCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 3554 4775 1155678999999999999863
No 134
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=91.23 E-value=0.14 Score=45.14 Aligned_cols=39 Identities=28% Similarity=0.824 Sum_probs=34.0
Q ss_pred CcCCCCCCCCCCCEEecCCCCeeEeCC-CCCcCCCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCINRSDRYQCLCT-PRYSGNNCEKDN 80 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~~~~~~~C~c~-~g~~g~~c~~~~ 80 (181)
.+.|.+.||.++++|+...+.|.|.|+ ++|+|..|+.+.
T Consensus 1017 ~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1017 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp CCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBCC
T ss_pred cCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCCC
Confidence 367888999999999988888999999 699999998544
No 135
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.12 E-value=0.23 Score=26.13 Aligned_cols=25 Identities=24% Similarity=0.493 Sum_probs=19.6
Q ss_pred CCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 156 NPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 156 ~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
+.|.+| +|+.......+.|.|++||
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy 38 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGY 38 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCC
Confidence 678886 9987654445899999997
No 136
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=90.07 E-value=0.23 Score=33.83 Aligned_cols=32 Identities=28% Similarity=0.808 Sum_probs=25.1
Q ss_pred CCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccc
Q psy9688 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 110 ~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
..|. .+|.+++.|+. + .+|.|++||.|..|+.
T Consensus 149 ~~C~-~~C~ngG~Cv~--P--~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 149 AECP-GGCRNGGFCNE--R--RICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCT-TCCCTTCEECT--T--SCEECCTTCBTTTTCB
T ss_pred CccC-CCCCCCCEeCC--C--CcccCcCCCCCCCCcC
Confidence 3453 47999999974 2 4799999999999974
No 137
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=89.86 E-value=0.16 Score=39.32 Aligned_cols=27 Identities=44% Similarity=0.972 Sum_probs=0.0
Q ss_pred CCCCCCCEEecCCCCeeEeCCCCCcCCCCC
Q psy9688 48 DPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77 (181)
Q Consensus 48 ~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~ 77 (181)
.+|.++++|.+.. .|.|++||+|..|+
T Consensus 371 ~~C~ngg~C~~~~---~C~C~~G~~G~~Ce 397 (426)
T 3zyj_B 371 LHCQNGGTCHNNV---RCLCPAAYTGILCE 397 (426)
T ss_dssp ------------------------------
T ss_pred ccCCCCCCcCCCC---CCcCCCCCcCCCCc
Confidence 5788888897655 89999999998886
No 138
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=89.72 E-value=0.17 Score=33.87 Aligned_cols=32 Identities=28% Similarity=0.755 Sum_probs=25.8
Q ss_pred cccCcCCCCCC-----CCCCCEEecCCCCeeEeCCCCCc
Q psy9688 39 NSKVDHCLTDP-----CLGHGTCINRSDRYQCLCTPRYS 72 (181)
Q Consensus 39 ~~~~~~c~~~~-----c~~~~~C~~~~~~~~C~c~~g~~ 72 (181)
..++++|...+ |.+ .|++..+.|.|.|++||.
T Consensus 121 ~~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 121 AEDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp EEECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred ccccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 45678886543 654 799999999999999997
No 139
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=89.34 E-value=0.25 Score=43.62 Aligned_cols=38 Identities=37% Similarity=1.026 Sum_probs=33.6
Q ss_pred CcCCCCCCCCCCCEEecCCCCeeEeCC-CCCcCCCCCCC
Q psy9688 42 VDHCLTDPCLGHGTCINRSDRYQCLCT-PRYSGNNCEKD 79 (181)
Q Consensus 42 ~~~c~~~~c~~~~~C~~~~~~~~C~c~-~g~~g~~c~~~ 79 (181)
.+.|.+.||.+++.|.+..+.|.|.|+ +||.|..|+.+
T Consensus 619 ~~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~~ 657 (1245)
T 3qcw_A 619 AKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCERE 657 (1245)
T ss_dssp SCGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCEE
T ss_pred CCCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCccc
Confidence 467888999999999998889999999 79999999743
No 140
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=88.36 E-value=0.22 Score=32.83 Aligned_cols=30 Identities=27% Similarity=0.608 Sum_probs=23.1
Q ss_pred CCCCCCCC--CCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 148 NSAACVTL--NPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 148 ~~~~c~~~--~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++++|... ..|. ..|.+..++ +.|.|++||
T Consensus 116 d~~eC~~~~~~~C~--~~C~n~~g~--~~C~C~~Gy 147 (159)
T 1nzi_A 116 DINECTDFVDVPCS--HFCNNFIGG--YFCSCPPEY 147 (159)
T ss_dssp ECCTTTC-CCCCSS--SEEEEETTE--EEEECCTTC
T ss_pred cCcccCCCCCCCCC--CcccCcCCC--EEEecCCCc
Confidence 66788652 3465 489999998 899999997
No 141
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=79.25 E-value=1.6 Score=28.48 Aligned_cols=32 Identities=31% Similarity=0.770 Sum_probs=25.0
Q ss_pred cccCcCCCC---CCCCCCCEEecCCCCeeEeCCCCCc
Q psy9688 39 NSKVDHCLT---DPCLGHGTCINRSDRYQCLCTPRYS 72 (181)
Q Consensus 39 ~~~~~~c~~---~~c~~~~~C~~~~~~~~C~c~~g~~ 72 (181)
..++++|.. .+|. ..|.+..+.|.|.|.+||.
T Consensus 114 ~~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 114 ATDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp EEECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCE
T ss_pred cccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcE
Confidence 456778854 2464 5799988999999999998
No 142
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=72.67 E-value=1.7 Score=31.48 Aligned_cols=29 Identities=24% Similarity=0.791 Sum_probs=18.9
Q ss_pred CcCCCCC---CCCCCCEEecCCCCeeEeCCCCCc
Q psy9688 42 VDHCLTD---PCLGHGTCINRSDRYQCLCTPRYS 72 (181)
Q Consensus 42 ~~~c~~~---~c~~~~~C~~~~~~~~C~c~~g~~ 72 (181)
.|+|... .|. ..|.+..+.|.|.|..||.
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~ 33 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYR 33 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEE
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcc
Confidence 4566433 343 3677777788888888876
No 143
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=69.43 E-value=2.3 Score=31.01 Aligned_cols=53 Identities=25% Similarity=0.642 Sum_probs=33.5
Q ss_pred CCCCCEEeeCCCCceEeecCCCCccCCccccCCC--------CCCCC---CCCCCCCEEeeCCCCcceEEecCCC
Q psy9688 117 CLNDCVCVDDGNLSFYCNCTEDFTGEYCQFENSA--------ACVTL---NPCQNNATCVASPGEKQITCLCLKE 180 (181)
Q Consensus 117 c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~~~~~--------~c~~~---~~C~~~~~C~~~~g~~~~~C~C~~g 180 (181)
|..++++.- -.|.|.+||.|..|+..... .|... ..|..+|.|+ -|. |.|.++
T Consensus 198 C~g~G~~~C-----G~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~--CG~----C~C~~~ 261 (280)
T 2p26_A 198 CHGKGFLEC-----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQ----CLCHTS 261 (280)
T ss_dssp GGGSEEEET-----TEEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEE--TTE----EEECCC
T ss_pred cCCCCeECC-----CceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEe--CCe----eECcCC
Confidence 555555532 25899999999998752111 57531 2488888886 343 777554
No 144
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=68.60 E-value=2.1 Score=31.90 Aligned_cols=18 Identities=33% Similarity=0.933 Sum_probs=11.7
Q ss_pred EEecCCCCeeEeCCCCCc
Q psy9688 55 TCINRSDRYQCLCTPRYS 72 (181)
Q Consensus 55 ~C~~~~~~~~C~c~~g~~ 72 (181)
.|++..++|.|.|.+||.
T Consensus 13 ~C~n~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 13 GCTNSEGAFQCWCEAGYE 30 (349)
T ss_dssp EECCC---CCEECCTTEE
T ss_pred eeecCCCCeEEECCCCcc
Confidence 677777778888888876
No 145
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=67.97 E-value=2.6 Score=30.42 Aligned_cols=24 Identities=25% Similarity=0.841 Sum_probs=18.7
Q ss_pred CEEeeCCCCceEeecCCCCc----cCCcc
Q psy9688 121 CVCVDDGNLSFYCNCTEDFT----GEYCQ 145 (181)
Q Consensus 121 ~~C~~~~~~~~~C~C~~g~~----g~~c~ 145 (181)
..|.+ ..++|+|.|..||. +..|.
T Consensus 15 ~~C~~-~~~~~~C~C~~G~~l~~d~~sC~ 42 (283)
T 3f1s_B 15 HFCLP-GQESYTCSCAQGYRLGEDHKQCV 42 (283)
T ss_dssp SBCCC-CTTSCCCBCCTTEEECTTSSCEE
T ss_pred CEeeC-CCCCeEecCCCCcccCCCCCccc
Confidence 36777 78899999999986 44565
No 146
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=67.24 E-value=2.2 Score=31.82 Aligned_cols=18 Identities=22% Similarity=0.706 Sum_probs=13.7
Q ss_pred EEeeCCCCceEeecCCCCc
Q psy9688 122 VCVDDGNLSFYCNCTEDFT 140 (181)
Q Consensus 122 ~C~~~~~~~~~C~C~~g~~ 140 (181)
.|.+ ..++|.|.|.+||.
T Consensus 13 ~C~n-~~g~~~C~C~~g~~ 30 (349)
T 3v64_C 13 GCTN-SEGAFQCWCEAGYE 30 (349)
T ss_dssp EECC-C---CCEECCTTEE
T ss_pred eeec-CCCCeEEECCCCcc
Confidence 8888 89999999999996
No 147
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=63.27 E-value=0.93 Score=37.44 Aligned_cols=38 Identities=16% Similarity=0.572 Sum_probs=29.2
Q ss_pred ecCCCCccCCccccCCCCCCCCCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 134 NCTEDFTGEYCQFENSAACVTLNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 134 ~C~~g~~g~~c~~~~~~~c~~~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
.|.+||.|++|.. ...|. ..|..+|+|++. . |+|.+||
T Consensus 521 ~C~~gw~g~dc~i--~~~Cp--~~C~ghG~C~~G--~----C~Cd~G~ 558 (725)
T 2e26_A 521 DKQQTWAIDNVYI--GDGCL--DMCSGHGRCVQG--S----CVCDEQW 558 (725)
T ss_dssp CTTCCEEEEEEEE--ESCSS--GGGGGSEEEETT--E----EEECTTE
T ss_pred ccCCCcccccccc--cCCCC--cccCCCcEECCC--C----EeeCCCc
Confidence 6788999998862 25664 489999999853 3 9998886
No 148
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=62.62 E-value=7.1 Score=33.40 Aligned_cols=40 Identities=33% Similarity=0.703 Sum_probs=32.0
Q ss_pred cCcCCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCCC
Q psy9688 41 KVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDN 80 (181)
Q Consensus 41 ~~~~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~~ 80 (181)
+.+.|.-.||.+++.++.......|.|.+||.|..|+...
T Consensus 496 e~~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 496 KFDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp TTCGGGSCCBTTTBEEEEETTEEEEECCTTBCSTTSCCBC
T ss_pred ccccccCCCCCCCCEeecCCCceEEEccCCccccCccCcc
Confidence 4455655689999999877777889999999999998654
No 149
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=59.30 E-value=7.6 Score=31.03 Aligned_cols=31 Identities=26% Similarity=0.588 Sum_probs=24.4
Q ss_pred CCCCCCCEEeeCCCCceEeecCCCCcc--CCcc
Q psy9688 115 NPCLNDCVCVDDGNLSFYCNCTEDFTG--EYCQ 145 (181)
Q Consensus 115 ~~c~~~~~C~~~~~~~~~C~C~~g~~g--~~c~ 145 (181)
++|+.++.|+....+.|.|.|+.||.| ..|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 589999999874567789999999974 4453
No 150
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=53.19 E-value=5 Score=33.23 Aligned_cols=31 Identities=35% Similarity=1.087 Sum_probs=25.8
Q ss_pred CCCCCCCCCCCEEecCCCCeeEeCCCCCcCCCCCCC
Q psy9688 44 HCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79 (181)
Q Consensus 44 ~c~~~~c~~~~~C~~~~~~~~C~c~~g~~g~~c~~~ 79 (181)
.| +..|..+|.|+++ .|+|.+||.|..|...
T Consensus 536 ~C-p~~C~ghG~C~~G----~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 536 GC-LDMCSGHGRCVQG----SCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CS-SGGGGGSEEEETT----EEEECTTEESTTSCEE
T ss_pred CC-CcccCCCcEECCC----CEeeCCCccCCCcCcc
Confidence 44 3578999999988 9999999999999743
No 151
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=50.78 E-value=8.4 Score=31.36 Aligned_cols=30 Identities=27% Similarity=0.690 Sum_probs=22.4
Q ss_pred CCCCCCC-CCCCCCCCEEeeCC-CCcceEEecCCCC
Q psy9688 148 NSAACVT-LNPCQNNATCVASP-GEKQITCLCLKEV 181 (181)
Q Consensus 148 ~~~~c~~-~~~C~~~~~C~~~~-g~~~~~C~C~~g~ 181 (181)
.+++|.. ...|.+ .|++++ ++ |.|.|+.||
T Consensus 264 ~~n~C~~~ng~C~~--~C~~~~~~~--~~C~C~~g~ 295 (628)
T 4a0p_A 264 GWNECASSNGHCSH--LCLAVPVGG--FVCGCPAHY 295 (628)
T ss_dssp CCCTTTTTGGGCSS--EEEEETTTE--EEEECSTTC
T ss_pred cceEeccCCCCcch--hhhcCCCCC--eeEEcCCCc
Confidence 4566765 235766 999998 76 899999987
No 152
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=50.36 E-value=16 Score=26.48 Aligned_cols=31 Identities=26% Similarity=0.648 Sum_probs=20.0
Q ss_pred CCCCCCC----CCCCCCCEEeeCCC----CcceEEecCCCC
Q psy9688 149 SAACVTL----NPCQNNATCVASPG----EKQITCLCLKEV 181 (181)
Q Consensus 149 ~~~c~~~----~~C~~~~~C~~~~g----~~~~~C~C~~g~ 181 (181)
.++|... ..|.+ .|+++++ ...|.|.|+.||
T Consensus 267 ~n~C~~~~~~ng~Cs~--~C~~~p~~~~~~~~~~C~C~~g~ 305 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQY--LCLPAPQINPHSPKFTCACPDGM 305 (316)
T ss_dssp CCTTSSSSSGGGGCSS--EEEECCCCSTTCCSEEEECCTTC
T ss_pred cccccccccCCCCcCc--ccCCCccccCCCCCeEeeCCCCC
Confidence 3556541 24665 8998762 123899999986
No 153
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=44.97 E-value=18 Score=26.41 Aligned_cols=30 Identities=27% Similarity=0.596 Sum_probs=20.3
Q ss_pred CCCCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 150 AACVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 150 ~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
..|.. ...|.+ .|+..++...+.|.|+.||
T Consensus 268 n~C~~~ng~Cs~--~C~~~~~~~~~~C~C~~g~ 298 (318)
T 3sov_A 268 NPCGIDNGGCSH--LCLMSPVKPFYQCACPTGV 298 (318)
T ss_dssp CTTTTTGGGCSS--EEEECSSTTSEEEECSTTC
T ss_pred cccccCCCCcce--EEecCCCCCCeEEECCCCC
Confidence 44543 124655 8998876434899999986
No 154
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=41.45 E-value=29 Score=26.36 Aligned_cols=20 Identities=35% Similarity=0.740 Sum_probs=16.5
Q ss_pred CCCCeeEeCCCCCcCCCCCC
Q psy9688 59 RSDRYQCLCTPRYSGNNCEK 78 (181)
Q Consensus 59 ~~~~~~C~c~~g~~g~~c~~ 78 (181)
..+.+.|.|.+++.|..|+.
T Consensus 268 ~~~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp TTSCEEECCCTTEESTTSCE
T ss_pred CCCCeeeeCcCCCcCCCccc
Confidence 44567899999999999974
No 155
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=39.21 E-value=13 Score=30.18 Aligned_cols=28 Identities=21% Similarity=0.654 Sum_probs=20.4
Q ss_pred CCCCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 150 AACVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 150 ~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
++|.. ...|.+ .|++++++ +.|.|+.||
T Consensus 579 ~~C~~~ng~C~~--~C~~~~~~--~~C~C~~g~ 607 (619)
T 3s94_A 579 NPCAEENGGCSH--LCLYRPQG--LRCACPIGF 607 (619)
T ss_dssp CGGGSGGGGCSS--EEEEETTE--EEEECCTTC
T ss_pred ccCCCCCCChhH--hhccCCCC--eEEECCCCC
Confidence 34543 224655 99999988 889999986
No 156
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=35.95 E-value=41 Score=28.85 Aligned_cols=36 Identities=25% Similarity=0.525 Sum_probs=28.6
Q ss_pred CCCCCCCCCCCCEEeeCCCCceEeecCCCCccCCccc
Q psy9688 110 RDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146 (181)
Q Consensus 110 ~~c~~~~c~~~~~C~~~~~~~~~C~C~~g~~g~~c~~ 146 (181)
+.|.-.||.+++.+.. ..+...|.|++||.|..|+.
T Consensus 498 ~~c~C~PC~ngg~~~l-~g~~C~C~C~~g~~G~~Ce~ 533 (913)
T 3t5o_A 498 DPCQCAPCPNNGRPTL-SGTECLCVCQSGTYGENCEK 533 (913)
T ss_dssp CGGGSCCBTTTBEEEE-ETTEEEEECCTTBCSTTSCC
T ss_pred ccccCCCCCCCCEeec-CCCceEEEccCCccccCccC
Confidence 4444458999999986 67778899999999998875
No 157
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=35.03 E-value=7.5 Score=29.66 Aligned_cols=25 Identities=36% Similarity=0.958 Sum_probs=20.9
Q ss_pred CCCCCCCCEEecCCCCeeEeCCCCCcCCC
Q psy9688 47 TDPCLGHGTCINRSDRYQCLCTPRYSGNN 75 (181)
Q Consensus 47 ~~~c~~~~~C~~~~~~~~C~c~~g~~g~~ 75 (181)
+..|..+|.|++. .|.|.+||.|..
T Consensus 195 p~~CsGhG~C~~g----~C~Cd~G~~g~d 219 (387)
T 2ddu_A 195 PSYCSGHGDCISG----VCFCDLGYTAAQ 219 (387)
T ss_dssp GGGGGGSEEEETT----EEEECTTEEEET
T ss_pred ccccCCCceecCC----eEEecCCcccCC
Confidence 4569999999875 999999999753
No 158
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=32.26 E-value=31 Score=28.06 Aligned_cols=31 Identities=19% Similarity=0.560 Sum_probs=21.5
Q ss_pred CCCCCCCCCCCCCEEeeCCC-CceEeecCCCCc
Q psy9688 109 IRDCTSNPCLNDCVCVDDGN-LSFYCNCTEDFT 140 (181)
Q Consensus 109 ~~~c~~~~c~~~~~C~~~~~-~~~~C~C~~g~~ 140 (181)
+++|....-.....|.+ .. ++|+|.|++||.
T Consensus 265 ~n~C~~~ng~C~~~C~~-~~~~~~~C~C~~g~~ 296 (628)
T 4a0p_A 265 WNECASSNGHCSHLCLA-VPVGGFVCGCPAHYS 296 (628)
T ss_dssp CCTTTTTGGGCSSEEEE-ETTTEEEEECSTTCE
T ss_pred ceEeccCCCCcchhhhc-CCCCCeeEEcCCCcE
Confidence 45665432122348988 66 899999999996
No 159
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=31.65 E-value=48 Score=24.13 Aligned_cols=19 Identities=26% Similarity=0.597 Sum_probs=15.4
Q ss_pred CEEecCCC--CeeEeCCCCCc
Q psy9688 54 GTCINRSD--RYQCLCTPRYS 72 (181)
Q Consensus 54 ~~C~~~~~--~~~C~c~~g~~ 72 (181)
..|+..++ .|+|.|+.||.
T Consensus 279 ~~C~~~~~~~~~~C~C~~g~~ 299 (318)
T 3sov_A 279 HLCLMSPVKPFYQCACPTGVK 299 (318)
T ss_dssp SEEEECSSTTSEEEECSTTCC
T ss_pred eEEecCCCCCCeEEECCCCCE
Confidence 36887655 69999999997
No 160
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=28.85 E-value=33 Score=27.48 Aligned_cols=31 Identities=23% Similarity=0.697 Sum_probs=23.9
Q ss_pred CCCCCCCCEEecCC-CCeeEeCCCCCc--CCCCC
Q psy9688 47 TDPCLGHGTCINRS-DRYQCLCTPRYS--GNNCE 77 (181)
Q Consensus 47 ~~~c~~~~~C~~~~-~~~~C~c~~g~~--g~~c~ 77 (181)
.++|..++.|+... +.|.|.|..||. |..|.
T Consensus 26 ~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 26 PSECHEHADCVLERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp BCCCCTTEEEEECTTSCEEEEECTTEESSSSSCE
T ss_pred CCCCCCCCeeEeCCCCCEecCCCCCCCCCCcccC
Confidence 46899999998754 468999999998 44554
No 161
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=26.98 E-value=15 Score=29.43 Aligned_cols=21 Identities=33% Similarity=0.760 Sum_probs=14.2
Q ss_pred CCCCCEEecCCCCeeEeCCCCCc
Q psy9688 50 CLGHGTCINRSDRYQCLCTPRYS 72 (181)
Q Consensus 50 c~~~~~C~~~~~~~~C~c~~g~~ 72 (181)
|...|.++...| .|.|..||.
T Consensus 252 C~~dG~w~~p~G--~C~C~~G~e 272 (536)
T 3fl7_A 252 CAVDGEWLVPIG--QCLCQAGYE 272 (536)
T ss_dssp ECTTSCBCCCBC--CCEECTTEE
T ss_pred EcCCCCEecccC--cEeccCccc
Confidence 666666654333 788999997
No 162
>1lr7_A Follistatin, FS1; heparin-binding, cystine-rich, sucrose octasulphate, hormone/growth factor complex; HET: SO4; 1.50A {Rattus norvegicus} SCOP: g.3.11.3 g.68.1.1 PDB: 1lr8_A* 1lr9_A
Probab=20.32 E-value=1.2e+02 Score=16.62 Aligned_cols=27 Identities=19% Similarity=0.602 Sum_probs=14.9
Q ss_pred CCCCCCCCCCCCCEEeeCCCCcceEEecC
Q psy9688 150 AACVTLNPCQNNATCVASPGEKQITCLCL 178 (181)
Q Consensus 150 ~~c~~~~~C~~~~~C~~~~g~~~~~C~C~ 178 (181)
+.|.. ..|..+..|+....+ ...|.|+
T Consensus 2 ~~C~~-~~C~~g~~C~~~~~~-~~~C~C~ 28 (74)
T 1lr7_A 2 ETCEN-VDCGPGKKCRMNKKN-KPRCVCA 28 (74)
T ss_dssp CCSTT-CCCCTTEEEEECTTS-CEEEEEC
T ss_pred CCCCC-CcCcCCCEEeECCCC-CeeecCC
Confidence 34544 567777777653332 2456664
No 163
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=20.14 E-value=82 Score=25.50 Aligned_cols=30 Identities=27% Similarity=0.596 Sum_probs=19.7
Q ss_pred CCCCC-CCCCCCCCEEeeCCCCcceEEecCCCC
Q psy9688 150 AACVT-LNPCQNNATCVASPGEKQITCLCLKEV 181 (181)
Q Consensus 150 ~~c~~-~~~C~~~~~C~~~~g~~~~~C~C~~g~ 181 (181)
.+|.. ...|.+ .|+.++....|.|.|+.||
T Consensus 273 n~C~~~ng~Cs~--lCl~~~~~~~~~C~C~~g~ 303 (619)
T 3s94_A 273 NPCGIDNGGCSH--LCLMSPVKPFYQCACPTGV 303 (619)
T ss_dssp CTTTTTGGGCSS--EEEECSSTTSEEEECCTTC
T ss_pred ccccCCCCcccc--eEECCCCCCCceEeCCchh
Confidence 34543 124655 8998875334899999987
No 164
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=20.07 E-value=74 Score=25.03 Aligned_cols=14 Identities=43% Similarity=1.191 Sum_probs=7.4
Q ss_pred eEeCCCCCcCCCCC
Q psy9688 64 QCLCTPRYSGNNCE 77 (181)
Q Consensus 64 ~C~c~~g~~g~~c~ 77 (181)
.|.|.+||.|..|+
T Consensus 459 ~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 459 VCRCGPGWLGSQCE 472 (472)
T ss_dssp EEEECTTC------
T ss_pred ceECcCCCCCCCCC
Confidence 78999999999885
Done!