RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9688
         (181 letters)



>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog
          protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 39

 Score = 40.0 bits (94), Expect = 3e-06
 Identities = 14/38 (36%), Positives = 25/38 (65%)

Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79
          V+ C+++PC    TC+++   +QC+C P Y G +CE +
Sbjct: 1  VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 38



 Score = 34.3 bits (79), Expect = 5e-04
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
           + +C SNPC ND  C+D     F C C   + G +C+
Sbjct: 1   VNECVSNPCQNDATCLDQIG-EFQCICMPGYEGVHCE 36


>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 39

 Score = 38.9 bits (91), Expect = 9e-06
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
           D C ++PCL  G+C +  + Y+C C   + G NCE
Sbjct: 3  GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38



 Score = 33.9 bits (78), Expect = 7e-04
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 108 EIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
           +   C SNPCLN   C DD N S+ C C   F G+ C+
Sbjct: 2   DGDQCESNPCLNGGSCKDDIN-SYECWCPFGFEGKNCE 38


>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
          [TaxId: 9823]}
          Length = 37

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
           D C + PC   G+C ++   Y C C P + G NCE
Sbjct: 2  GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37



 Score = 25.0 bits (55), Expect = 1.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query: 79 DNGDCSSNPCLNDGVCVDEV 98
          D   C+S+PC N G C D++
Sbjct: 1  DGDQCASSPCQNGGSCKDQL 20


>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 39

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
          D C T PC   G C +    Y C C   + G NCE
Sbjct: 1  DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCE 35



 Score = 25.0 bits (55), Expect = 0.84
 Identities = 7/17 (41%), Positives = 10/17 (58%)

Query: 82 DCSSNPCLNDGVCVDEV 98
           C ++PC N G C D +
Sbjct: 2  QCETSPCQNQGKCKDGL 18


>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog
          protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 35

 Score = 37.3 bits (87), Expect = 3e-05
 Identities = 12/35 (34%), Positives = 23/35 (65%)

Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
          D C + PCL +G C+++ + +QC C   ++G+ C+
Sbjct: 1  DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35



 Score = 25.0 bits (55), Expect = 1.0
 Identities = 8/17 (47%), Positives = 16/17 (94%)

Query: 82 DCSSNPCLNDGVCVDEV 98
          +C+S+PCL++G C+D++
Sbjct: 2  ECASSPCLHNGRCLDKI 18


>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 39

 Score = 36.3 bits (84), Expect = 8e-05
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79
            C    C GHG C+   + Y C C P +SG  CE+ 
Sbjct: 2  AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 38



 Score = 24.3 bits (53), Expect = 2.0
 Identities = 5/17 (29%), Positives = 9/17 (52%)

Query: 82 DCSSNPCLNDGVCVDEV 98
           C++  C   G CV+ +
Sbjct: 3  ACTNTSCSGHGECVETI 19


>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 40

 Score = 35.9 bits (83), Expect = 1e-04
 Identities = 11/35 (31%), Positives = 13/35 (37%)

Query: 43 DHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCE 77
            C    C   G C+     Y C C P + G  CE
Sbjct: 2  ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECE 36



 Score = 24.0 bits (52), Expect = 2.1
 Identities = 4/16 (25%), Positives = 7/16 (43%)

Query: 83 CSSNPCLNDGVCVDEV 98
          C    C   G C++ +
Sbjct: 4  CQDMSCSKQGECLETI 19


>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog
          protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 42

 Score = 35.1 bits (81), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 45 CLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79
             +PC   G CIN    ++C C   Y+G  CE D
Sbjct: 8  LGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 42


>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
           module {Sheep (Ovis aries) [TaxId: 9940]}
          Length = 42

 Score = 33.6 bits (77), Expect = 7e-04
 Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 109 IRDCTSNPCLNDCVCVDDGNLSFYCNCTED-FTGEYCQ 145
           +  C   PC +  +CV  G   + C+CT   ++G  C 
Sbjct: 2   VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCT 39



 Score = 31.7 bits (72), Expect = 0.004
 Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 42 VDHCLTDPCLGHGTCINRS-DRYQCLCTP-RYSGNNCEK 78
          V+ C   PC   G C+    DRYQC CT   YSG NC  
Sbjct: 2  VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40


>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
           module {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 41

 Score = 32.5 bits (74), Expect = 0.002
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 111 DCTSNPCLNDCVCVDDGNLSFYCNCTED-FTGEYCQ 145
            C SNPC N   C+  G   + C+CT   F GE C 
Sbjct: 3   PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCT 38



 Score = 30.5 bits (69), Expect = 0.012
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 43 DHCLTDPCLGHGTCINRS-DRYQCLCT-PRYSGNNCEK 78
          + C ++PC   G C++   D+Y+C CT   + G NC  
Sbjct: 2  NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39


>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
          IIa) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 48

 Score = 32.5 bits (74), Expect = 0.003
 Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKD 79
             C +  C  HGTCI+    + C C   + G  C+++
Sbjct: 8  EHPCASLCCG-HGTCIDGIGSFSCDCRSGWEGRFCQRE 44



 Score = 28.6 bits (64), Expect = 0.066
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 106 LPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQFE 147
           LP    C S  C +   C+D    SF C+C   + G +CQ E
Sbjct: 5   LPLEHPCASLCCGH-GTCIDGIG-SFSCDCRSGWEGRFCQRE 44


>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 63

 Score = 32.3 bits (73), Expect = 0.004
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 5/53 (9%)

Query: 41 KVDHCLTDPCLGHGTC-----INRSDRYQCLCTPRYSGNNCEKDNGDCSSNPC 88
          K        C+  G C     ++   RY C C P ++G  C ++      N  
Sbjct: 5  KCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQE 57



 Score = 30.4 bits (68), Expect = 0.022
 Identities = 10/53 (18%), Positives = 14/53 (26%), Gaps = 4/53 (7%)

Query: 106 LPEIRDCTSNPCLNDCVCVD----DGNLSFYCNCTEDFTGEYCQFENSAACVT 154
           L +  +     C+N   C           + C C   FTG  C          
Sbjct: 3   LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQN 55


>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 48

 Score = 30.6 bits (69), Expect = 0.013
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 108 EIRDCTSNPCLNDCVCVD-DGNLSFYCNCTEDFTGEYCQFEN 148
           E        CL+D VC+  +    + CNC   + GE CQ+ +
Sbjct: 3   ECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 44



 Score = 30.2 bits (68), Expect = 0.019
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 39 NSKVDHCLTDPCLGHGTC--INRSDRYQCLCTPRYSGNNCE 77
          +S+        CL  G C  I   D+Y C C   Y G  C+
Sbjct: 1  DSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQ 41



 Score = 23.7 bits (51), Expect = 4.3
 Identities = 4/22 (18%), Positives = 8/22 (36%)

Query: 156 NPCQNNATCVASPGEKQITCLC 177
             C ++  C+      +  C C
Sbjct: 10  GYCLHDGVCMYIEALDKYACNC 31


>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 50

 Score = 30.2 bits (68), Expect = 0.019
 Identities = 6/36 (16%), Positives = 11/36 (30%)

Query: 111 DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
               + C+           +  C C E + G  C+ 
Sbjct: 10  KQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45



 Score = 26.7 bits (59), Expect = 0.33
 Identities = 7/37 (18%), Positives = 12/37 (32%), Gaps = 1/37 (2%)

Query: 45 CLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCEKDN 80
               C+      +       C+C   Y G  CE+ +
Sbjct: 11 QYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCERVD 47


>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
          musculus) [TaxId: 10090]}
          Length = 53

 Score = 29.9 bits (67), Expect = 0.025
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 45 CLTDPCLGHGTC--INRSDRYQCLCTPRYSGNNCEKDN 80
               CL  G C  I   D Y C C   YSG+ C+  +
Sbjct: 9  SYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46



 Score = 26.0 bits (57), Expect = 0.59
 Identities = 14/74 (18%), Positives = 21/74 (28%), Gaps = 28/74 (37%)

Query: 75  NCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPCLNDCVCVDDGNLSFYCN 134
           N            CLN GVC+                              +   S+ CN
Sbjct: 1   NSYPGCPSSYDGYCLNGGVCMH----------------------------IESLDSYTCN 32

Query: 135 CTEDFTGEYCQFEN 148
           C   ++G+ CQ  +
Sbjct: 33  CVIGYSGDRCQTRD 46



 Score = 24.5 bits (53), Expect = 1.9
 Identities = 6/22 (27%), Positives = 7/22 (31%)

Query: 156 NPCQNNATCVASPGEKQITCLC 177
             C N   C+        TC C
Sbjct: 12  GYCLNGGVCMHIESLDSYTCNC 33


>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
          t-PA {Human (Homo sapiens) [TaxId: 9606]}
          Length = 41

 Score = 28.7 bits (64), Expect = 0.056
 Identities = 11/37 (29%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 45 CLTDPCLGHGTCINRSD--RYQCLCTPRYSGNNCEKD 79
          C    C   GTC        + C C   ++G +CE D
Sbjct: 1  CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEID 37



 Score = 25.2 bits (55), Expect = 0.88
 Identities = 7/21 (33%), Positives = 9/21 (42%)

Query: 83  CSSNPCLNDGVCVDEVYKGRY 103
           CS   C N G C   +Y   +
Sbjct: 1   CSEPRCFNGGTCQQALYFSDF 21



 Score = 22.9 bits (49), Expect = 6.3
 Identities = 6/22 (27%), Positives = 7/22 (31%)

Query: 156 NPCQNNATCVASPGEKQITCLC 177
             C N  TC  +       C C
Sbjct: 4   PRCFNGGTCQQALYFSDFVCQC 25


>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 46

 Score = 28.6 bits (64), Expect = 0.061
 Identities = 8/41 (19%), Positives = 14/41 (34%)

Query: 105 ELPEIRDCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQ 145
            + +     +  CL+            YC C   +TG  C+
Sbjct: 2   SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42



 Score = 27.1 bits (60), Expect = 0.22
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 3/40 (7%)

Query: 40 SKVDHCLTDPCLGHGTC--INRSDRYQCLCTPRYSGNNCE 77
          +K    +   CL HG C  +    +  C C   Y+G  CE
Sbjct: 4  TKCSSDMNGYCL-HGQCIYLVDMSQNYCRCEVGYTGVRCE 42


>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 49

 Score = 28.3 bits (63), Expect = 0.075
 Identities = 6/36 (16%), Positives = 10/36 (27%)

Query: 111 DCTSNPCLNDCVCVDDGNLSFYCNCTEDFTGEYCQF 146
           D  +  C +             C C   + G  C+ 
Sbjct: 9   DSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 44



 Score = 23.6 bits (51), Expect = 3.4
 Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)

Query: 45 CLTDPCLGHGTC-INRSDRYQCLCTPRYSGNNCE 77
            T  C       + + D+  C+C   Y G  CE
Sbjct: 10 SHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43


>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 43

 Score = 27.8 bits (62), Expect = 0.091
 Identities = 11/34 (32%), Positives = 13/34 (38%)

Query: 42 VDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNN 75
          +D C       HG CIN    Y+C C   Y    
Sbjct: 5  MDECKEPDVCKHGQCINTDGSYRCECPFGYILAG 38


>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 44

 Score = 26.3 bits (58), Expect = 0.38
 Identities = 12/23 (52%), Positives = 15/23 (65%)

Query: 14 SDINECETVKDVCNYGICVNTNG 36
          +DI+EC    D+C  G CVNT G
Sbjct: 1  TDIDECRISPDLCGRGQCVNTPG 23


>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 42

 Score = 25.9 bits (57), Expect = 0.52
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 15 DINECETVKDVCNYGICVNTNG 36
          DI+EC+    +C  G+C NT G
Sbjct: 1  DIDECQRDPLLCRGGVCHNTEG 22


>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 43

 Score = 25.9 bits (57), Expect = 0.53
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 15 DINECETVKDVCNYGICVNTNG 36
          DI+EC+ +  +C  G C+NT G
Sbjct: 2  DIDECQELPGLCQGGKCINTFG 23


>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 43

 Score = 25.2 bits (55), Expect = 0.95
 Identities = 11/35 (31%), Positives = 15/35 (42%)

Query: 40 SKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGN 74
          + V+ CL       G C+N    Y C C P +  N
Sbjct: 1  TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELN 35


>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
          musculus) [TaxId: 10090]}
          Length = 55

 Score = 24.9 bits (54), Expect = 1.7
 Identities = 11/49 (22%), Positives = 19/49 (38%), Gaps = 3/49 (6%)

Query: 49 PCLGHGTCINRSDRYQCLCT---PRYSGNNCEKDNGDCSSNPCLNDGVC 94
          PC G  +C       + +CT      +G  CE  +     +P  ++G  
Sbjct: 2  PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPV 50


>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
          (Mus musculus) [TaxId: 10090]}
          Length = 40

 Score = 23.6 bits (51), Expect = 3.0
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 47 TDPCLGHGTCINRSDRYQCLCTPRYSGN 74
             C  H  C + +  + C C   Y+GN
Sbjct: 6  RHQCSVHAECRDYATGFCCRCVANYTGN 33


>d1esoa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD {Escherichia
           coli [TaxId: 562]}
          Length = 154

 Score = 25.4 bits (55), Expect = 3.5
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 6/84 (7%)

Query: 28  YGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP 87
           +G  ++  G+                G  ++  +      T ++ G       GD  +  
Sbjct: 45  HGFHIHAKGSCQPATKDGKASAAESAGGHLDPQN------TGKHEGPEGAGHLGDLPALV 98

Query: 88  CLNDGVCVDEVYKGRYWELPEIRD 111
             NDG   D V   R   L EI+D
Sbjct: 99  VNNDGKATDAVIAPRLKSLDEIKD 122


>d2c5lc1 d.15.1.5 (C:2134-2239) Phospholipase C-epsilon-1 {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 106

 Score = 24.8 bits (54), Expect = 3.5
 Identities = 14/54 (25%), Positives = 19/54 (35%), Gaps = 12/54 (22%)

Query: 64  QCLCTPRYSGNNCEKDNGDCSSNPCLNDGVCVDEVYKGRYWELPEIRDCTSNPC 117
           Q LC  +YS            SNP  +D V ++EV K         +  T    
Sbjct: 34  QTLCKAKYSL--------SILSNPNPSDYVLLEEVVKD--TT--NKKTTTPKSS 75


>d1nl1a2 g.32.1.1 (A:1-65) Prothrombin {Cow (Bos taurus) [TaxId:
          9913]}
          Length = 65

 Score = 24.0 bits (52), Expect = 3.9
 Identities = 3/16 (18%), Positives = 7/16 (43%)

Query: 81 GDCSSNPCLNDGVCVD 96
           + + NP      C++
Sbjct: 48 CESARNPREKLNECLE 63


>d2nqca1 b.1.18.10 (A:2482-2578) Filamin C {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 97

 Score = 24.5 bits (53), Expect = 4.3
 Identities = 9/42 (21%), Positives = 14/42 (33%)

Query: 32 VNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSG 73
          VNT   G+  +   +  P      C    + +    TP   G
Sbjct: 27 VNTLNAGSGALSVTIDGPSKVQLDCRECPEGHVVTYTPMAPG 68


>d2apsa_ b.1.8.1 (A:) Cu,Zn superoxide dismutase, SOD
           {Actinobacillus pleuropneumoniae [TaxId: 715]}
          Length = 155

 Score = 24.6 bits (53), Expect = 5.7
 Identities = 15/83 (18%), Positives = 28/83 (33%), Gaps = 5/83 (6%)

Query: 28  YGICVNTNGNGNSKVDHCLTDPCLGHGTCINRSDRYQCLCTPRYSGNNCEKDNGDCSSNP 87
           +G  ++ N +   K         LG G   +  +  Q          +     GD  +  
Sbjct: 45  HGFHIHQNPSCEPKEKDGKLVAGLGAGGHWDPKETKQHG-----YPWSDNAHLGDLPALF 99

Query: 88  CLNDGVCVDEVYKGRYWELPEIR 110
             +DG   + V   R  +L E++
Sbjct: 100 VEHDGSATNPVLAPRLKKLDEVK 122


>d2b7oa1 c.1.10.8 (A:1-462) Probable DAHP synthetase AroG,
           phenylalanine-repressible {Mycobacterium tuberculosis
           [TaxId: 1773]}
          Length = 462

 Score = 25.3 bits (55), Expect = 6.1
 Identities = 9/24 (37%), Positives = 12/24 (50%), Gaps = 3/24 (12%)

Query: 50  CLGHGTCI---NRSDRYQCLCTPR 70
           CLG    I   + + RY+  C PR
Sbjct: 420 CLGGAQDISETDLAGRYETACDPR 443


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.137    0.475 

Gapped
Lambda     K      H
   0.267   0.0655    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 731,051
Number of extensions: 38651
Number of successful extensions: 379
Number of sequences better than 10.0: 1
Number of HSP's gapped: 297
Number of HSP's successfully gapped: 165
Length of query: 181
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 101
Effective length of database: 1,309,196
Effective search space: 132228796
Effective search space used: 132228796
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.2 bits)