Query psy969
Match_columns 106
No_of_seqs 107 out of 1006
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 17:07:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy969.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/969hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p1x_A Deoxyribose-phosphate a 100.0 2.7E-33 9.2E-38 219.5 10.8 96 3-105 155-251 (260)
2 2a4a_A Deoxyribose-phosphate a 100.0 2.8E-33 9.5E-38 222.0 10.9 98 3-105 177-278 (281)
3 4eiv_A Deoxyribose-phosphate a 100.0 4.4E-33 1.5E-37 222.8 9.8 96 3-104 171-284 (297)
4 1vcv_A Probable deoxyribose-ph 99.9 3.4E-27 1.2E-31 181.6 8.2 82 3-98 133-225 (226)
5 3r12_A Deoxyribose-phosphate a 99.9 1.8E-25 6.2E-30 175.8 9.7 75 3-101 178-253 (260)
6 3ndo_A Deoxyribose-phosphate a 99.9 3.6E-25 1.2E-29 171.2 9.6 75 3-101 151-227 (231)
7 3oa3_A Aldolase; structural ge 99.9 1.1E-24 3.9E-29 173.3 9.5 79 3-102 193-272 (288)
8 3ngj_A Deoxyribose-phosphate a 99.9 6.4E-25 2.2E-29 170.7 7.9 75 3-101 162-237 (239)
9 1ub3_A Aldolase protein; schif 99.9 5.7E-24 1.9E-28 162.5 9.1 74 3-100 138-212 (220)
10 1n7k_A Deoxyribose-phosphate a 99.9 1.2E-22 4E-27 157.0 8.0 76 3-105 153-232 (234)
11 1mzh_A Deoxyribose-phosphate a 99.7 2.1E-16 7.2E-21 119.2 9.4 75 3-101 137-212 (225)
12 1w8s_A FBP aldolase, fructose- 98.8 6E-09 2.1E-13 80.2 6.8 70 3-100 164-236 (263)
13 1qap_A Quinolinic acid phospho 98.0 9.7E-06 3.3E-10 64.0 6.4 61 5-96 222-283 (296)
14 2b7n_A Probable nicotinate-nuc 97.8 3.4E-05 1.2E-09 59.8 5.6 64 5-96 196-260 (273)
15 2jbm_A Nicotinate-nucleotide p 97.7 3.1E-05 1.1E-09 60.9 4.5 64 5-96 211-275 (299)
16 3c2e_A Nicotinate-nucleotide p 97.4 5.2E-05 1.8E-09 59.5 2.5 66 5-95 213-279 (294)
17 1yxy_A Putative N-acetylmannos 97.4 0.00051 1.7E-08 50.2 7.5 61 4-81 146-210 (234)
18 3glc_A Aldolase LSRF; TIM barr 97.3 0.00048 1.7E-08 54.3 6.2 57 3-81 194-252 (295)
19 1f76_A Dihydroorotate dehydrog 97.1 0.0016 5.4E-08 50.4 7.9 35 42-81 279-313 (336)
20 2qjg_A Putative aldolase MJ040 96.8 0.0021 7.2E-08 48.0 5.9 58 4-81 172-232 (273)
21 3zwt_A Dihydroorotate dehydrog 96.7 0.0036 1.2E-07 50.3 6.6 73 4-81 240-322 (367)
22 1jub_A Dihydroorotate dehydrog 96.5 0.0069 2.4E-07 46.1 7.0 37 40-81 230-266 (311)
23 3sgz_A Hydroxyacid oxidase 2; 96.4 0.019 6.5E-07 46.3 9.2 64 4-81 231-296 (352)
24 3khj_A Inosine-5-monophosphate 96.3 0.0087 3E-07 47.9 6.7 67 4-81 159-231 (361)
25 3i65_A Dihydroorotate dehydrog 96.2 0.004 1.4E-07 51.3 4.3 69 4-81 289-369 (415)
26 2nzl_A Hydroxyacid oxidase 1; 96.2 0.015 5.3E-07 46.9 7.7 64 4-81 266-331 (392)
27 2e6f_A Dihydroorotate dehydrog 96.2 0.0052 1.8E-07 46.9 4.7 35 41-81 234-268 (314)
28 1me8_A Inosine-5'-monophosphat 96.1 0.011 3.7E-07 48.7 6.4 73 4-83 298-378 (503)
29 1vrd_A Inosine-5'-monophosphat 96.1 0.013 4.4E-07 47.7 6.6 70 4-84 292-367 (494)
30 2nli_A Lactate oxidase; flavoe 96.0 0.021 7.1E-07 45.7 7.5 64 4-81 243-308 (368)
31 2qr6_A IMP dehydrogenase/GMP r 96.0 0.017 5.7E-07 45.8 6.6 73 4-83 225-303 (393)
32 1vcf_A Isopentenyl-diphosphate 95.7 0.018 6E-07 44.8 5.8 25 52-81 256-280 (332)
33 1tv5_A Dhodehase, dihydroorota 95.7 0.024 8.1E-07 46.9 6.8 73 4-81 317-397 (443)
34 3ffs_A Inosine-5-monophosphate 95.6 0.031 1.1E-06 45.7 7.0 68 4-81 198-270 (400)
35 1gox_A (S)-2-hydroxy-acid oxid 95.4 0.032 1.1E-06 44.3 6.3 64 4-81 239-304 (370)
36 1ep3_A Dihydroorotate dehydrog 95.3 0.027 9.2E-07 42.3 5.3 25 52-81 241-265 (311)
37 2c6q_A GMP reductase 2; TIM ba 95.2 0.042 1.4E-06 43.6 6.5 69 4-83 175-249 (351)
38 4fo4_A Inosine 5'-monophosphat 95.1 0.035 1.2E-06 44.7 5.8 68 4-81 163-235 (366)
39 1y0e_A Putative N-acetylmannos 95.1 0.12 4.2E-06 36.9 8.1 65 5-81 133-199 (223)
40 3f4w_A Putative hexulose 6 pho 95.0 0.0089 3E-07 42.7 1.9 59 4-81 120-182 (211)
41 1zfj_A Inosine monophosphate d 95.0 0.051 1.7E-06 43.9 6.5 68 5-83 289-362 (491)
42 1ypf_A GMP reductase; GUAC, pu 95.0 0.068 2.3E-06 41.7 6.9 68 4-83 163-236 (336)
43 3vk5_A MOEO5; TIM barrel, tran 94.9 0.089 3E-06 41.8 7.5 57 6-81 194-251 (286)
44 3igs_A N-acetylmannosamine-6-p 94.6 0.11 3.8E-06 38.8 7.1 68 4-92 142-211 (232)
45 1eep_A Inosine 5'-monophosphat 94.5 0.064 2.2E-06 42.7 5.8 69 4-83 208-282 (404)
46 3oix_A Putative dihydroorotate 94.5 0.03 1E-06 44.6 3.9 37 40-81 263-299 (345)
47 4avf_A Inosine-5'-monophosphat 94.4 0.067 2.3E-06 44.1 5.9 66 4-82 284-357 (490)
48 3q58_A N-acetylmannosamine-6-p 94.4 0.12 4.2E-06 38.6 6.8 67 5-92 143-211 (229)
49 3r2g_A Inosine 5'-monophosphat 94.3 0.15 5.3E-06 41.0 7.6 61 4-81 155-223 (361)
50 1kbi_A Cytochrome B2, L-LCR; f 94.2 0.16 5.5E-06 42.3 7.7 68 4-81 357-427 (511)
51 4fxs_A Inosine-5'-monophosphat 94.1 0.097 3.3E-06 43.3 6.1 67 4-81 286-358 (496)
52 1jcn_A Inosine monophosphate d 93.9 0.095 3.3E-06 42.9 5.8 68 4-82 310-383 (514)
53 1p0k_A Isopentenyl-diphosphate 93.8 0.19 6.6E-06 39.0 7.1 26 51-81 250-275 (349)
54 3usb_A Inosine-5'-monophosphat 93.7 0.15 5.1E-06 42.3 6.7 67 4-83 311-385 (511)
55 3vkj_A Isopentenyl-diphosphate 93.5 0.19 6.6E-06 40.3 6.9 25 52-81 267-291 (368)
56 1z41_A YQJM, probable NADH-dep 93.2 0.53 1.8E-05 36.6 8.8 79 3-84 149-247 (338)
57 1p4c_A L(+)-mandelate dehydrog 93.1 0.21 7.3E-06 39.8 6.5 59 4-81 239-302 (380)
58 1h5y_A HISF; histidine biosynt 92.6 0.35 1.2E-05 34.3 6.5 25 52-81 198-222 (253)
59 2nv1_A Pyridoxal biosynthesis 92.4 0.19 6.5E-06 38.4 5.1 20 57-81 214-233 (305)
60 3b0p_A TRNA-dihydrouridine syn 92.3 0.15 5.3E-06 40.1 4.5 22 51-72 196-217 (350)
61 3sr7_A Isopentenyl-diphosphate 92.3 0.34 1.2E-05 38.9 6.6 27 50-81 276-302 (365)
62 2p10_A MLL9387 protein; putati 91.5 0.83 2.8E-05 36.2 8.0 78 5-96 177-263 (286)
63 1vyr_A Pentaerythritol tetrani 91.5 0.68 2.3E-05 36.6 7.5 81 3-84 166-269 (364)
64 1icp_A OPR1, 12-oxophytodienoa 91.3 0.81 2.8E-05 36.4 7.8 80 3-83 172-273 (376)
65 3qja_A IGPS, indole-3-glycerol 91.0 0.44 1.5E-05 36.6 5.8 66 5-93 176-244 (272)
66 1xm3_A Thiazole biosynthesis p 91.0 0.57 1.9E-05 35.4 6.3 59 4-81 140-202 (264)
67 4ef8_A Dihydroorotate dehydrog 90.8 0.14 4.9E-06 40.9 2.9 27 50-81 275-301 (354)
68 1gte_A Dihydropyrimidine dehyd 90.6 0.4 1.4E-05 42.4 5.9 35 41-81 777-811 (1025)
69 3hgj_A Chromate reductase; TIM 90.5 1.3 4.6E-05 34.6 8.3 79 3-84 157-257 (349)
70 3l5a_A NADH/flavin oxidoreduct 90.2 1.1 3.7E-05 36.4 7.7 79 3-83 175-282 (419)
71 2zbt_A Pyridoxal biosynthesis 90.2 1.1 3.9E-05 33.6 7.4 20 57-81 214-233 (297)
72 3tqv_A Nicotinate-nucleotide p 90.0 0.41 1.4E-05 37.7 4.9 60 5-95 212-272 (287)
73 3tsm_A IGPS, indole-3-glycerol 89.9 0.65 2.2E-05 36.0 5.9 67 5-93 183-251 (272)
74 3gr7_A NADPH dehydrogenase; fl 89.9 1.2 4E-05 34.9 7.5 80 3-84 149-247 (340)
75 1yad_A Regulatory protein TENI 89.9 0.56 1.9E-05 33.6 5.2 60 5-81 124-187 (221)
76 3gr7_A NADPH dehydrogenase; fl 89.9 0.6 2E-05 36.6 5.8 64 4-81 235-302 (340)
77 3tdn_A FLR symmetric alpha-bet 89.7 0.67 2.3E-05 33.8 5.6 25 52-81 79-103 (247)
78 3l0g_A Nicotinate-nucleotide p 89.5 0.49 1.7E-05 37.6 5.0 60 5-95 221-281 (300)
79 2r14_A Morphinone reductase; H 88.7 1.8 6.2E-05 34.4 7.9 81 3-84 171-273 (377)
80 1ka9_F Imidazole glycerol phos 88.7 1.1 3.8E-05 32.3 6.1 59 4-81 158-220 (252)
81 1vzw_A Phosphoribosyl isomeras 88.6 0.3 1E-05 35.4 3.0 54 5-72 153-210 (244)
82 1qpo_A Quinolinate acid phosph 88.1 1.1 3.9E-05 34.8 6.2 63 5-95 208-271 (284)
83 1x1o_A Nicotinate-nucleotide p 88.1 1.2 4.1E-05 34.7 6.3 61 5-96 210-271 (286)
84 3tjx_A Dihydroorotate dehydrog 87.6 0.36 1.2E-05 37.7 3.0 37 39-81 265-301 (354)
85 4adt_A Pyridoxine biosynthetic 87.1 3.2 0.00011 32.4 8.2 31 52-92 209-239 (297)
86 1ea0_A Glutamate synthase [NAD 87.0 1 3.4E-05 42.6 6.1 71 5-82 1011-1089(1479)
87 1z41_A YQJM, probable NADH-dep 86.9 1.2 4.2E-05 34.5 5.7 63 4-81 235-302 (338)
88 1ps9_A 2,4-dienoyl-COA reducta 86.5 2.6 8.9E-05 35.1 7.8 79 3-84 146-246 (671)
89 3bo9_A Putative nitroalkan dio 86.5 2.3 7.8E-05 32.9 7.0 62 5-81 138-200 (326)
90 3l5l_A Xenobiotic reductase A; 86.3 0.98 3.3E-05 35.6 4.9 80 3-84 163-264 (363)
91 3l5l_A Xenobiotic reductase A; 86.3 1.3 4.3E-05 35.0 5.6 20 53-72 296-315 (363)
92 3hgj_A Chromate reductase; TIM 86.3 1.5 5.2E-05 34.3 6.0 20 53-72 289-308 (349)
93 3gka_A N-ethylmaleimide reduct 86.1 2.1 7.1E-05 34.1 6.8 80 3-84 166-268 (361)
94 1xi3_A Thiamine phosphate pyro 86.0 1.2 4E-05 31.2 4.8 59 6-81 123-185 (215)
95 4ab4_A Xenobiotic reductase B; 85.7 2.9 9.9E-05 33.3 7.5 80 3-84 158-260 (362)
96 3bw2_A 2-nitropropane dioxygen 85.7 2.7 9.1E-05 32.8 7.1 25 52-81 208-232 (369)
97 2gjl_A Hypothetical protein PA 85.7 2.3 7.8E-05 32.5 6.6 64 5-81 132-196 (328)
98 3nav_A Tryptophan synthase alp 85.6 4.2 0.00014 31.2 8.1 63 5-81 167-232 (271)
99 2y88_A Phosphoribosyl isomeras 85.4 0.84 2.9E-05 32.8 3.9 59 4-81 37-98 (244)
100 1rvk_A Isomerase/lactonizing e 85.2 3.7 0.00013 31.8 7.7 73 5-85 158-234 (382)
101 2gou_A Oxidoreductase, FMN-bin 85.1 2.5 8.7E-05 33.3 6.8 80 3-84 166-268 (365)
102 4e38_A Keto-hydroxyglutarate-a 85.0 0.64 2.2E-05 35.3 3.1 56 5-81 141-197 (232)
103 1o4u_A Type II quinolic acid p 84.9 0.49 1.7E-05 37.0 2.5 63 5-95 207-270 (285)
104 2yw3_A 4-hydroxy-2-oxoglutarat 84.8 0.8 2.7E-05 33.4 3.5 55 5-81 118-174 (207)
105 2z6i_A Trans-2-enoyl-ACP reduc 84.6 2.4 8.2E-05 32.6 6.3 63 4-81 123-186 (332)
106 2tps_A Protein (thiamin phosph 84.5 2 6.8E-05 30.4 5.4 23 53-81 173-195 (227)
107 3gnn_A Nicotinate-nucleotide p 84.5 1.7 5.8E-05 34.4 5.5 60 5-95 223-283 (298)
108 2w6r_A Imidazole glycerol phos 84.3 1.4 4.9E-05 32.1 4.8 60 5-81 163-224 (266)
109 4gj1_A 1-(5-phosphoribosyl)-5- 84.2 1.3 4.6E-05 33.0 4.6 26 51-81 74-99 (243)
110 1ofd_A Ferredoxin-dependent gl 84.2 1.9 6.4E-05 41.0 6.4 71 5-82 1046-1124(1520)
111 2y88_A Phosphoribosyl isomeras 83.6 1.2 4.1E-05 32.0 4.0 21 52-72 193-213 (244)
112 3paj_A Nicotinate-nucleotide p 83.5 2.9 0.0001 33.3 6.5 60 5-95 245-305 (320)
113 1thf_D HISF protein; thermophI 83.3 2.6 9E-05 30.3 5.8 60 5-81 158-219 (253)
114 3k30_A Histamine dehydrogenase 82.8 4.3 0.00015 34.0 7.5 76 3-82 161-259 (690)
115 3kru_A NADH:flavin oxidoreduct 82.8 4.6 0.00016 31.8 7.4 79 3-84 148-247 (343)
116 3lab_A Putative KDPG (2-keto-3 82.7 0.85 2.9E-05 34.5 3.0 56 5-81 126-182 (217)
117 1wv2_A Thiazole moeity, thiazo 81.5 2.7 9.2E-05 33.0 5.5 59 4-81 149-211 (265)
118 4af0_A Inosine-5'-monophosphat 81.3 3.6 0.00012 35.3 6.6 59 3-82 285-346 (556)
119 1qo2_A Molecule: N-((5-phospho 81.0 0.86 2.9E-05 33.1 2.4 55 5-73 151-209 (241)
120 1to3_A Putative aldolase YIHT; 80.9 1.7 5.9E-05 33.7 4.2 66 3-81 182-249 (304)
121 2czd_A Orotidine 5'-phosphate 80.9 2.1 7.3E-05 30.6 4.4 63 4-90 125-189 (208)
122 1vhc_A Putative KHG/KDPG aldol 80.7 2.1 7.2E-05 31.8 4.5 53 3-83 81-134 (224)
123 3tdn_A FLR symmetric alpha-bet 80.6 0.33 1.1E-05 35.6 0.0 25 52-81 200-224 (247)
124 3l5a_A NADH/flavin oxidoreduct 79.8 3.9 0.00013 33.1 6.2 62 4-72 270-338 (419)
125 1wbh_A KHG/KDPG aldolase; lyas 79.7 2.6 9.1E-05 30.9 4.7 53 3-83 80-133 (214)
126 3ajx_A 3-hexulose-6-phosphate 79.6 1.1 3.9E-05 31.4 2.6 56 7-81 123-181 (207)
127 3vnd_A TSA, tryptophan synthas 79.3 12 0.00042 28.5 8.5 52 33-100 192-243 (267)
128 3aty_A Tcoye, prostaglandin F2 79.2 7.3 0.00025 31.0 7.5 81 3-84 179-284 (379)
129 2yw3_A 4-hydroxy-2-oxoglutarat 79.2 4 0.00014 29.6 5.5 53 3-83 75-128 (207)
130 1rd5_A Tryptophan synthase alp 79.2 4.4 0.00015 29.8 5.8 25 52-81 201-225 (262)
131 1vhn_A Putative flavin oxidore 78.7 2 6.7E-05 32.9 3.9 22 52-73 183-204 (318)
132 2cu0_A Inosine-5'-monophosphat 78.7 5.6 0.00019 32.2 6.7 27 52-83 328-354 (486)
133 2fli_A Ribulose-phosphate 3-ep 78.1 2.3 7.8E-05 30.0 3.8 24 52-81 170-193 (220)
134 1wa3_A 2-keto-3-deoxy-6-phosph 77.7 2 7E-05 30.1 3.5 55 5-81 118-173 (205)
135 1i4n_A Indole-3-glycerol phosp 77.6 1.7 5.8E-05 33.2 3.2 66 5-93 164-232 (251)
136 4e38_A Keto-hydroxyglutarate-a 77.0 1.7 5.8E-05 33.0 3.0 52 4-83 99-151 (232)
137 1pii_A N-(5'phosphoribosyl)ant 76.4 3.6 0.00012 34.0 5.0 66 5-93 171-238 (452)
138 3ffs_A Inosine-5-monophosphate 76.0 4.4 0.00015 32.9 5.4 61 3-84 148-210 (400)
139 2poz_A Putative dehydratase; o 75.9 8.6 0.00029 30.0 6.9 49 33-83 180-230 (392)
140 1geq_A Tryptophan synthase alp 75.7 6.1 0.00021 28.4 5.6 25 52-81 191-215 (248)
141 1rpx_A Protein (ribulose-phosp 74.2 7 0.00024 27.9 5.6 24 52-81 179-202 (230)
142 3o07_A Pyridoxine biosynthesis 74.1 13 0.00044 29.5 7.5 20 57-81 205-224 (291)
143 3o63_A Probable thiamine-phosp 74.1 3 0.0001 31.4 3.7 62 5-81 149-214 (243)
144 3jr2_A Hexulose-6-phosphate sy 73.9 10 0.00035 27.1 6.4 59 5-82 77-135 (218)
145 2v82_A 2-dehydro-3-deoxy-6-pho 73.3 1.3 4.5E-05 31.4 1.5 24 52-81 148-171 (212)
146 2qr6_A IMP dehydrogenase/GMP r 72.9 5.7 0.00019 31.2 5.2 61 5-85 172-238 (393)
147 1vzw_A Phosphoribosyl isomeras 72.8 3.8 0.00013 29.5 3.9 24 53-81 76-99 (244)
148 1vhc_A Putative KHG/KDPG aldol 72.6 2.3 7.8E-05 31.6 2.7 52 5-72 124-176 (224)
149 2o56_A Putative mandelate race 72.5 23 0.00078 27.6 8.6 50 34-85 197-249 (407)
150 1jvn_A Glutamine, bifunctional 72.2 5.7 0.00019 33.1 5.3 64 4-81 458-521 (555)
151 2hsa_B 12-oxophytodienoate red 72.0 16 0.00056 29.2 7.8 79 3-83 176-283 (402)
152 1vrd_A Inosine-5'-monophosphat 71.8 3.9 0.00013 32.9 4.1 62 3-84 241-304 (494)
153 1o94_A Tmadh, trimethylamine d 71.2 9.6 0.00033 32.2 6.5 76 3-81 154-252 (729)
154 2f6u_A GGGPS, (S)-3-O-geranylg 71.1 7.7 0.00026 29.3 5.4 40 52-103 190-229 (234)
155 1wbh_A KHG/KDPG aldolase; lyas 71.0 2.6 8.8E-05 31.0 2.7 52 5-72 123-175 (214)
156 1jub_A Dihydroorotate dehydrog 70.4 15 0.00053 27.4 6.9 44 38-83 146-189 (311)
157 1qop_A Tryptophan synthase alp 70.2 19 0.00065 26.7 7.4 24 53-81 206-229 (268)
158 2agk_A 1-(5-phosphoribosyl)-5- 70.0 6.9 0.00024 29.4 4.9 22 52-73 205-226 (260)
159 2qq6_A Mandelate racemase/muco 70.0 21 0.00072 27.9 7.9 48 34-83 192-241 (410)
160 1xrs_A D-lysine 5,6-aminomutas 69.9 6.8 0.00023 33.3 5.2 51 15-70 198-249 (516)
161 2hzg_A Mandelate racemase/muco 69.2 17 0.00058 28.4 7.2 70 5-85 154-229 (401)
162 3lab_A Putative KDPG (2-keto-3 68.7 11 0.00039 28.2 5.8 60 4-86 31-93 (217)
163 3iz6_S 40S ribosomal protein S 68.4 2.4 8.3E-05 30.6 2.0 22 84-105 91-112 (146)
164 3khj_A Inosine-5-monophosphate 68.4 5 0.00017 31.8 4.0 62 3-84 109-171 (361)
165 2htm_A Thiazole biosynthesis p 68.1 13 0.00043 29.2 6.1 24 53-81 179-202 (268)
166 1h5y_A HISF; histidine biosynt 67.6 5.2 0.00018 28.1 3.6 24 53-81 78-101 (253)
167 2ovl_A Putative racemase; stru 67.6 7 0.00024 30.3 4.6 30 52-83 193-222 (371)
168 4fo4_A Inosine 5'-monophosphat 67.4 7.9 0.00027 30.9 5.0 61 3-84 112-175 (366)
169 1vhn_A Putative flavin oxidore 67.4 6.3 0.00022 30.0 4.3 46 33-83 109-157 (318)
170 1vkf_A Glycerol uptake operon 67.4 3.6 0.00012 30.5 2.8 25 51-81 148-172 (188)
171 2gl5_A Putative dehydratase pr 67.3 17 0.00058 28.4 6.8 50 34-85 200-252 (410)
172 1vc4_A Indole-3-glycerol phosp 67.1 7 0.00024 29.4 4.4 69 5-93 168-238 (254)
173 3vkj_A Isopentenyl-diphosphate 66.6 7.8 0.00027 30.9 4.8 39 42-85 179-217 (368)
174 1hg3_A Triosephosphate isomera 66.6 23 0.00078 26.4 7.1 60 17-95 150-209 (225)
175 4a29_A Engineered retro-aldol 66.6 11 0.00039 29.2 5.6 36 49-94 201-236 (258)
176 1thf_D HISF protein; thermophI 66.3 11 0.00036 27.1 5.1 24 53-81 75-98 (253)
177 1mxs_A KDPG aldolase; 2-keto-3 66.1 6.2 0.00021 29.2 3.9 53 3-83 90-143 (225)
178 1ka9_F Imidazole glycerol phos 65.6 4.4 0.00015 29.1 2.9 25 52-81 75-99 (252)
179 3u5c_T 40S ribosomal protein S 64.9 4.2 0.00014 29.3 2.6 15 12-26 34-49 (144)
180 3igs_A N-acetylmannosamine-6-p 64.2 14 0.00046 27.3 5.4 59 4-83 94-153 (232)
181 1ypf_A GMP reductase; GUAC, pu 63.9 5.7 0.0002 30.7 3.4 28 49-83 147-174 (336)
182 1mdl_A Mandelate racemase; iso 62.8 8.8 0.0003 29.4 4.3 30 52-83 191-220 (359)
183 3kru_A NADH:flavin oxidoreduct 62.0 27 0.00092 27.3 7.1 20 53-72 278-297 (343)
184 2yzr_A Pyridoxal biosynthesis 61.8 15 0.00051 29.5 5.6 21 56-81 246-266 (330)
185 3inp_A D-ribulose-phosphate 3- 61.8 4.5 0.00016 30.7 2.5 50 32-91 179-228 (246)
186 4af0_A Inosine-5'-monophosphat 61.6 22 0.00075 30.5 6.9 69 4-83 336-410 (556)
187 3r8r_A Transaldolase; pentose 61.2 29 0.00098 25.9 6.8 64 5-81 117-181 (212)
188 3kts_A Glycerol uptake operon 61.1 11 0.00037 27.9 4.3 25 52-81 150-174 (192)
189 3eeg_A 2-isopropylmalate synth 61.0 9.3 0.00032 29.7 4.2 76 4-93 216-293 (325)
190 2pgw_A Muconate cycloisomerase 60.9 25 0.00085 27.2 6.6 31 51-83 191-221 (384)
191 4avf_A Inosine-5'-monophosphat 60.3 15 0.00052 30.0 5.5 60 3-84 233-296 (490)
192 3ble_A Citramalate synthase fr 60.2 7.7 0.00026 30.2 3.6 72 4-92 231-304 (337)
193 2ox4_A Putative mandelate race 60.1 47 0.0016 25.8 8.1 48 34-83 191-240 (403)
194 1eep_A Inosine 5'-monophosphat 60.0 7.8 0.00027 30.5 3.6 61 4-84 158-220 (404)
195 3tjl_A NADPH dehydrogenase; OL 60.0 16 0.00053 29.7 5.5 81 3-84 173-284 (407)
196 3ceu_A Thiamine phosphate pyro 59.4 10 0.00035 27.1 3.9 32 52-96 144-175 (210)
197 3q58_A N-acetylmannosamine-6-p 59.3 16 0.00054 27.0 5.0 59 4-83 94-153 (229)
198 3r2g_A Inosine 5'-monophosphat 58.7 9.5 0.00033 30.5 3.9 60 3-84 104-167 (361)
199 2og9_A Mandelate racemase/muco 58.6 12 0.00042 29.2 4.5 30 52-83 209-238 (393)
200 1yxy_A Putative N-acetylmannos 58.4 11 0.00037 26.9 3.9 24 55-83 134-157 (234)
201 1ep3_A Dihydroorotate dehydrog 58.2 15 0.0005 27.2 4.7 45 35-84 149-194 (311)
202 2gou_A Oxidoreductase, FMN-bin 58.0 44 0.0015 26.1 7.7 56 4-72 256-312 (365)
203 2rdx_A Mandelate racemase/muco 57.2 32 0.0011 26.6 6.7 29 52-83 191-219 (379)
204 2uva_G Fatty acid synthase bet 56.9 30 0.001 33.7 7.6 59 8-71 713-774 (2060)
205 2r14_A Morphinone reductase; H 56.7 45 0.0016 26.3 7.6 57 4-72 261-318 (377)
206 3stp_A Galactonate dehydratase 56.6 29 0.00098 27.7 6.4 38 44-83 222-261 (412)
207 2qgy_A Enolase from the enviro 56.5 16 0.00054 28.5 4.8 30 52-83 196-225 (391)
208 2w6r_A Imidazole glycerol phos 55.4 12 0.00043 27.0 3.8 24 53-81 75-98 (266)
209 1p4c_A L(+)-mandelate dehydrog 55.4 12 0.00041 29.6 4.0 29 47-83 222-250 (380)
210 1jcn_A Inosine monophosphate d 55.4 10 0.00034 30.8 3.6 60 4-83 260-321 (514)
211 3mqt_A Mandelate racemase/muco 54.8 44 0.0015 26.1 7.2 31 52-83 202-232 (394)
212 3vzx_A Heptaprenylglyceryl pho 54.3 46 0.0016 25.0 6.9 24 52-81 180-203 (228)
213 3aty_A Tcoye, prostaglandin F2 54.2 38 0.0013 26.8 6.8 53 4-72 272-326 (379)
214 3tha_A Tryptophan synthase alp 53.7 49 0.0017 25.1 7.1 33 35-72 187-219 (252)
215 1qw2_A Conserved hypothetical 53.3 9.6 0.00033 26.0 2.7 38 15-69 36-73 (102)
216 1vyr_A Pentaerythritol tetrani 53.2 53 0.0018 25.6 7.4 56 4-72 257-313 (364)
217 4gbu_A NADPH dehydrogenase 1; 52.7 25 0.00085 27.9 5.5 52 3-59 177-247 (400)
218 1nu5_A Chloromuconate cycloiso 52.2 21 0.00071 27.4 4.8 30 52-83 190-219 (370)
219 2qde_A Mandelate racemase/muco 52.0 53 0.0018 25.5 7.2 30 52-83 191-220 (397)
220 2cw6_A Hydroxymethylglutaryl-C 51.5 51 0.0018 24.7 6.9 63 4-81 218-286 (298)
221 3ctl_A D-allulose-6-phosphate 51.4 19 0.00065 26.6 4.3 61 10-82 127-191 (231)
222 4a3u_A NCR, NADH\:flavin oxido 51.2 25 0.00084 27.5 5.2 56 3-59 157-227 (358)
223 2pp0_A L-talarate/galactarate 51.0 20 0.0007 28.0 4.7 30 52-83 222-251 (398)
224 1ps9_A 2,4-dienoyl-COA reducta 50.5 30 0.001 28.6 5.8 63 4-72 234-300 (671)
225 3sjn_A Mandelate racemase/muco 49.9 53 0.0018 25.4 6.9 67 5-83 155-225 (374)
226 1zfj_A Inosine monophosphate d 49.5 26 0.00088 28.0 5.1 61 4-83 238-299 (491)
227 2ftp_A Hydroxymethylglutaryl-C 48.6 31 0.0011 26.1 5.2 63 4-81 221-289 (302)
228 1q6o_A Humps, 3-keto-L-gulonat 48.5 3.8 0.00013 29.3 0.0 47 32-91 150-196 (216)
229 2htm_A Thiazole biosynthesis p 48.3 10 0.00034 29.7 2.4 26 58-83 70-95 (268)
230 1p0k_A Isopentenyl-diphosphate 47.8 26 0.00089 26.8 4.7 32 47-83 175-206 (349)
231 3mkc_A Racemase; metabolic pro 47.5 69 0.0024 25.1 7.3 31 52-83 207-237 (394)
232 1tzz_A Hypothetical protein L1 47.4 23 0.00079 27.5 4.4 30 52-83 212-241 (392)
233 3s1x_A Probable transaldolase; 47.3 43 0.0015 25.2 5.8 64 5-81 119-183 (223)
234 1viz_A PCRB protein homolog; s 46.9 41 0.0014 25.3 5.6 24 52-81 182-205 (240)
235 1v5x_A PRA isomerase, phosphor 46.8 18 0.00062 26.4 3.5 23 54-82 2-24 (203)
236 1nsj_A PRAI, phosphoribosyl an 46.7 18 0.00061 26.4 3.5 23 54-82 3-25 (205)
237 2nzl_A Hydroxyacid oxidase 1; 46.3 17 0.00059 29.0 3.6 34 42-83 244-277 (392)
238 1w0m_A TIM, triosephosphate is 46.1 24 0.00082 26.4 4.2 50 32-95 157-206 (226)
239 4ab4_A Xenobiotic reductase B; 45.8 49 0.0017 26.1 6.2 50 4-72 248-298 (362)
240 3gka_A N-ethylmaleimide reduct 45.7 50 0.0017 26.1 6.2 50 4-72 256-306 (361)
241 3tji_A Mandelate racemase/muco 45.5 51 0.0017 26.3 6.3 49 35-85 205-256 (422)
242 4gj1_A 1-(5-phosphoribosyl)-5- 45.3 16 0.00056 26.9 3.1 21 51-71 195-215 (243)
243 3m0z_A Putative aldolase; MCSG 45.3 24 0.00084 27.4 4.2 25 50-74 159-183 (249)
244 3v3w_A Starvation sensing prot 45.3 47 0.0016 26.4 6.0 49 35-85 209-260 (424)
245 4aaj_A N-(5'-phosphoribosyl)an 45.0 23 0.00079 26.4 3.9 26 51-83 19-44 (228)
246 1gte_A Dihydropyrimidine dehyd 44.8 77 0.0026 27.9 7.8 76 4-85 654-734 (1025)
247 4e5t_A Mandelate racemase / mu 44.5 1E+02 0.0034 24.2 7.8 81 3-85 158-242 (404)
248 1icp_A OPR1, 12-oxophytodienoa 44.5 42 0.0014 26.4 5.6 57 4-72 262-320 (376)
249 4e4u_A Mandalate racemase/muco 44.3 1.2E+02 0.004 24.0 8.4 41 41-83 190-232 (412)
250 3sbf_A Mandelate racemase / mu 44.3 61 0.0021 25.4 6.5 47 35-83 184-232 (401)
251 3r4e_A Mandelate racemase/muco 44.3 51 0.0017 26.1 6.1 46 36-83 204-251 (418)
252 3rcy_A Mandelate racemase/muco 44.3 1E+02 0.0035 24.6 7.9 76 3-85 153-237 (433)
253 4fxs_A Inosine-5'-monophosphat 43.8 17 0.00057 29.9 3.2 20 59-83 278-297 (496)
254 3t6c_A RSPA, putative MAND fam 43.7 96 0.0033 24.8 7.7 47 37-85 225-274 (440)
255 2i1o_A Nicotinate phosphoribos 43.6 55 0.0019 26.3 6.2 33 51-96 269-301 (398)
256 3b0p_A TRNA-dihydrouridine syn 43.4 54 0.0019 25.3 6.0 79 3-83 75-161 (350)
257 1rqb_A Transcarboxylase 5S sub 43.3 34 0.0012 28.8 5.1 59 4-79 238-298 (539)
258 1tkk_A Similar to chloromucona 42.8 25 0.00084 26.9 3.9 72 3-85 147-221 (366)
259 1vcf_A Isopentenyl-diphosphate 42.4 19 0.00066 27.5 3.2 38 40-84 172-210 (332)
260 3bjs_A Mandelate racemase/muco 42.4 1E+02 0.0036 24.3 7.6 68 3-85 192-263 (428)
261 2h6r_A Triosephosphate isomera 41.5 34 0.0011 24.8 4.3 49 32-94 154-202 (219)
262 3rr1_A GALD, putative D-galact 41.3 1.2E+02 0.0039 24.0 7.7 41 41-83 167-209 (405)
263 1jvn_A Glutamine, bifunctional 41.1 14 0.00049 30.6 2.4 33 52-94 327-370 (555)
264 3ovp_A Ribulose-phosphate 3-ep 41.0 21 0.0007 26.3 3.1 30 51-86 168-197 (228)
265 3sr7_A Isopentenyl-diphosphate 41.0 34 0.0012 27.2 4.6 40 41-85 197-236 (365)
266 2nli_A Lactate oxidase; flavoe 40.9 27 0.00092 27.5 3.9 27 49-83 228-254 (368)
267 3tva_A Xylose isomerase domain 40.5 96 0.0033 22.0 7.9 63 4-74 108-174 (290)
268 3cwn_A Transaldolase B; direct 40.1 80 0.0027 24.9 6.6 38 35-81 223-260 (337)
269 1tqx_A D-ribulose-5-phosphate 39.7 23 0.00077 26.3 3.1 34 52-91 173-206 (227)
270 1vc4_A Indole-3-glycerol phosp 39.1 99 0.0034 22.9 6.7 57 4-81 71-130 (254)
271 4e4f_A Mannonate dehydratase; 38.8 66 0.0022 25.6 5.9 47 35-83 211-259 (426)
272 1qo2_A Molecule: N-((5-phospho 38.3 22 0.00077 25.4 2.9 24 53-81 74-97 (241)
273 3usb_A Inosine-5'-monophosphat 38.2 46 0.0016 27.3 5.1 21 58-83 302-322 (511)
274 1f76_A Dihydroorotate dehydrog 37.8 69 0.0024 24.1 5.7 33 50-84 211-243 (336)
275 2x7v_A Probable endonuclease 4 37.8 98 0.0034 21.7 6.2 66 4-74 95-167 (287)
276 1tqj_A Ribulose-phosphate 3-ep 37.2 26 0.00088 25.5 3.1 40 32-81 157-196 (230)
277 2agk_A 1-(5-phosphoribosyl)-5- 37.1 48 0.0016 24.7 4.6 34 32-81 65-98 (260)
278 3fst_A 5,10-methylenetetrahydr 36.8 66 0.0023 24.9 5.5 53 8-73 173-226 (304)
279 3tcs_A Racemase, putative; PSI 36.5 1.1E+02 0.0039 23.9 6.9 32 52-85 201-233 (388)
280 3rzi_A Probable 3-deoxy-D-arab 36.4 74 0.0025 26.8 6.0 50 32-95 290-343 (462)
281 1qtw_A Endonuclease IV; DNA re 35.9 1.1E+02 0.0038 21.4 7.0 65 4-73 95-167 (285)
282 3qc0_A Sugar isomerase; TIM ba 35.9 1.1E+02 0.0037 21.2 6.7 67 4-74 89-168 (275)
283 3exr_A RMPD (hexulose-6-phosph 35.8 5.5 0.00019 29.2 -0.8 42 28-82 150-192 (221)
284 3dip_A Enolase; structural gen 35.3 1.6E+02 0.0055 23.1 7.9 51 33-85 194-247 (410)
285 3go2_A Putative L-alanine-DL-g 35.2 1.4E+02 0.0048 23.4 7.3 49 35-85 196-247 (409)
286 1kbi_A Cytochrome B2, L-LCR; f 34.8 37 0.0013 28.1 3.9 29 48-84 341-369 (511)
287 2z6i_A Trans-2-enoyl-ACP reduc 34.7 90 0.0031 23.6 5.9 53 4-83 81-134 (332)
288 3ugv_A Enolase; enzyme functio 34.3 96 0.0033 24.3 6.2 46 34-81 171-219 (390)
289 3w01_A Heptaprenylglyceryl pho 33.7 78 0.0027 23.9 5.3 21 52-72 186-206 (235)
290 2pge_A MENC; OSBS, NYSGXRC, PS 32.8 1.1E+02 0.0036 23.6 6.1 45 35-81 163-208 (377)
291 3toe_A MTH10B, DNA/RNA-binding 32.4 1E+02 0.0035 20.2 5.1 52 39-94 19-70 (91)
292 3mqt_A Mandelate racemase/muco 31.9 1.2E+02 0.004 23.7 6.3 47 35-81 153-200 (394)
293 1ujp_A Tryptophan synthase alp 31.7 57 0.0019 24.6 4.3 20 52-72 202-221 (271)
294 3sgz_A Hydroxyacid oxidase 2; 31.6 56 0.0019 26.0 4.4 37 32-83 206-242 (352)
295 3toy_A Mandelate racemase/muco 31.6 1E+02 0.0035 24.1 5.9 44 36-81 169-213 (383)
296 3kp1_A D-ornithine aminomutase 31.6 36 0.0012 30.3 3.5 62 4-70 94-173 (763)
297 3v5w_G G gamma-I, guanine nucl 31.0 46 0.0016 21.5 3.2 41 58-105 9-49 (77)
298 2c6q_A GMP reductase 2; TIM ba 30.9 38 0.0013 26.5 3.3 21 58-83 166-186 (351)
299 1o94_A Tmadh, trimethylamine d 30.5 58 0.002 27.4 4.5 21 52-72 291-311 (729)
300 1h1y_A D-ribulose-5-phosphate 30.3 52 0.0018 23.5 3.7 24 52-81 173-196 (228)
301 3dg3_A Muconate cycloisomerase 29.7 82 0.0028 24.2 5.0 30 52-83 187-216 (367)
302 2ekc_A AQ_1548, tryptophan syn 29.4 1.7E+02 0.0057 21.5 8.2 21 55-81 209-229 (262)
303 3hjz_A Transaldolase B; parach 29.4 2.1E+02 0.0072 22.6 7.4 38 35-81 207-244 (334)
304 3vcn_A Mannonate dehydratase; 29.4 71 0.0024 25.4 4.7 35 47-83 222-258 (425)
305 3tj4_A Mandelate racemase; eno 29.4 1.5E+02 0.0051 22.8 6.5 43 37-81 154-197 (372)
306 3cu2_A Ribulose-5-phosphate 3- 29.3 1E+02 0.0035 22.8 5.3 34 52-91 187-222 (237)
307 1wv2_A Thiazole moeity, thiazo 28.5 37 0.0013 26.5 2.8 25 59-83 81-106 (265)
308 3eez_A Putative mandelate race 28.5 1.4E+02 0.0049 23.0 6.2 44 35-81 146-189 (378)
309 3mkc_A Racemase; metabolic pro 28.4 1.5E+02 0.005 23.2 6.3 47 35-81 158-205 (394)
310 2e6f_A Dihydroorotate dehydrog 28.0 1.1E+02 0.0039 22.5 5.4 43 39-83 149-192 (314)
311 3gd6_A Muconate cycloisomerase 27.9 2.1E+02 0.0073 22.2 7.2 45 34-81 142-186 (391)
312 3m6y_A 4-hydroxy-2-oxoglutarat 27.8 1.1E+02 0.0036 24.2 5.3 38 30-74 169-206 (275)
313 1nh9_A MJA10B, DNA-binding pro 26.9 1.3E+02 0.0043 19.2 4.8 51 39-94 17-67 (87)
314 4dxk_A Mandelate racemase / mu 26.8 2.1E+02 0.0072 22.3 7.0 48 34-83 192-241 (400)
315 2qdd_A Mandelate racemase/muco 26.8 1.7E+02 0.0059 22.3 6.4 29 51-81 162-190 (378)
316 4a3u_A NCR, NADH\:flavin oxido 26.6 49 0.0017 25.7 3.2 59 4-73 247-306 (358)
317 2ozt_A TLR1174 protein; struct 26.2 1.9E+02 0.0063 21.9 6.4 42 38-81 120-161 (332)
318 3iwp_A Copper homeostasis prot 26.1 1.8E+02 0.0063 22.6 6.4 62 5-83 173-235 (287)
319 2zad_A Muconate cycloisomerase 25.3 2.2E+02 0.0074 21.4 7.5 69 3-85 146-218 (345)
320 3apt_A Methylenetetrahydrofola 24.9 72 0.0025 24.5 3.9 52 8-72 170-222 (310)
321 2ovl_A Putative racemase; stru 24.8 1.4E+02 0.0048 22.8 5.5 45 35-81 147-191 (371)
322 3i4k_A Muconate lactonizing en 24.7 2E+02 0.0067 22.2 6.4 29 51-81 166-194 (383)
323 2bdq_A Copper homeostasis prot 24.7 1.6E+02 0.0056 22.1 5.7 72 5-91 140-212 (224)
324 4dwd_A Mandelate racemase/muco 24.6 1.7E+02 0.0058 22.9 6.0 44 36-81 141-191 (393)
325 2cw6_A Hydroxymethylglutaryl-C 23.8 2.3E+02 0.0078 21.1 7.6 45 32-79 155-199 (298)
326 1rvk_A Isomerase/lactonizing e 23.5 2.1E+02 0.0072 21.7 6.3 46 36-81 151-200 (382)
327 2gdq_A YITF; mandelate racemas 23.3 2.2E+02 0.0075 21.8 6.4 44 36-81 141-184 (382)
328 4ay7_A Methylcobalamin\: coenz 23.2 88 0.003 23.7 4.0 36 5-46 311-347 (348)
329 3si9_A DHDPS, dihydrodipicolin 23.1 2.4E+02 0.0083 21.4 6.6 41 49-90 88-131 (315)
330 2og9_A Mandelate racemase/muco 23.1 1.7E+02 0.0059 22.5 5.8 44 36-81 164-207 (393)
331 2qde_A Mandelate racemase/muco 22.9 1.5E+02 0.0053 22.8 5.4 44 35-81 146-189 (397)
332 4e8g_A Enolase, mandelate race 22.8 1.5E+02 0.0051 23.2 5.4 46 34-81 164-210 (391)
333 3ozy_A Putative mandelate race 22.8 1.7E+02 0.0059 22.7 5.7 28 51-81 168-195 (389)
334 2pgw_A Muconate cycloisomerase 22.7 2E+02 0.007 21.9 6.1 44 34-81 147-190 (384)
335 2ox4_A Putative mandelate race 22.7 1.1E+02 0.0039 23.5 4.6 48 34-81 146-209 (403)
336 1yya_A Triosephosphate isomera 22.5 1.2E+02 0.0042 22.9 4.7 69 17-103 172-246 (250)
337 3k30_A Histamine dehydrogenase 22.4 48 0.0016 27.5 2.6 21 52-72 294-314 (690)
338 2jgq_A Triosephosphate isomera 22.2 1.6E+02 0.0056 22.0 5.3 69 17-106 164-233 (233)
339 2o56_A Putative mandelate race 22.1 1.2E+02 0.004 23.5 4.6 47 35-81 153-215 (407)
340 3tsm_A IGPS, indole-3-glycerol 21.5 2.7E+02 0.0092 21.1 7.2 65 5-95 86-153 (272)
341 3b3d_A YTBE protein, putative 21.2 2.5E+02 0.0086 21.0 6.2 72 4-84 71-145 (314)
342 1mdl_A Mandelate racemase; iso 21.0 2.5E+02 0.0085 21.1 6.2 46 34-81 144-189 (359)
343 3qst_A Triosephosphate isomera 21.0 99 0.0034 23.6 3.9 70 17-104 175-249 (255)
344 2rdx_A Mandelate racemase/muco 20.8 2.8E+02 0.0097 21.1 6.7 43 36-81 147-189 (379)
345 3my9_A Muconate cycloisomerase 20.8 1.2E+02 0.0043 23.3 4.5 43 37-81 149-191 (377)
346 3e96_A Dihydrodipicolinate syn 20.8 2.8E+02 0.0095 21.0 6.8 73 7-90 42-120 (316)
347 2nx9_A Oxaloacetate decarboxyl 20.6 58 0.002 26.7 2.7 34 4-40 219-254 (464)
348 3v5c_A Mandelate racemase/muco 20.2 1.7E+02 0.0059 22.8 5.3 48 32-81 146-201 (392)
349 3r0u_A Enzyme of enolase super 20.1 2.2E+02 0.0075 22.1 5.8 42 37-81 145-186 (379)
350 2ps2_A Putative mandelate race 20.1 2.2E+02 0.0075 21.6 5.7 18 63-80 172-189 (371)
351 4hnl_A Mandelate racemase/muco 20.0 3.1E+02 0.011 21.3 7.5 47 35-83 204-252 (421)
No 1
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=100.00 E-value=2.7e-33 Score=219.48 Aligned_cols=96 Identities=30% Similarity=0.548 Sum_probs=91.4
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+|++|+++|||| ||||||.++||| +++|++|++.|++|+ ++.+++||+||||||++||++|+++..+++|++
T Consensus 155 a~~ia~eaGADfVKTSTGf~~~gAt-----~e~v~lm~~~I~~~~--~g~~v~VKaaGGIrt~~~al~~i~aga~~lG~~ 227 (260)
T 1p1x_A 155 ASEISIKAGADFIKTSTGKVAVNAT-----PESARIMMEVIRDMG--VEKTVGFKPAGGVRTAEDAQKYLAIADELFGAD 227 (260)
T ss_dssp HHHHHHHTTCSEEECCCSCSSCCCC-----HHHHHHHHHHHHHHT--CTTTCEEECBSSCCSHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHhCCCEEEeCCCCCCCCCC-----HHHHHHHHHHHHHhc--CCCCceEEEeCCCCCHHHHHHHHHhhhhhcccc
Confidence 799999999999 999999999999 999999999999885 578999999999999999999999999999999
Q ss_pred ccCCCceeEeccchHHHHHHHHhh
Q psy969 82 WLNKDLFRIGASSLLNNILQELEA 105 (106)
Q Consensus 82 w~~~~~~RiGtSs~~~~l~~~l~~ 105 (106)
|++|++||||+|+++++|+++|+.
T Consensus 228 w~~~~~~RiGtS~~~~~i~~~~~~ 251 (260)
T 1p1x_A 228 WADARHYRFGASSLLASLLKALGH 251 (260)
T ss_dssp SCSTTTBCEEESTHHHHHHHHHTC
T ss_pred ccccCceEeecchhHHHHHHHhcc
Confidence 999999999999999988888753
No 2
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=100.00 E-value=2.8e-33 Score=221.95 Aligned_cols=98 Identities=28% Similarity=0.371 Sum_probs=87.3
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHH---hhhcCCceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHF---HKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~---~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
+|++|+++|||| ||||||.++||| ++++++|+++++++ |...+.+++||+||||||++||++|+++..+++
T Consensus 177 A~~ia~eaGADfVKTSTGf~~~gAT-----~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~aga~~l 251 (281)
T 2a4a_A 177 TTLAVLNGNADFIKTSTGKVQINAT-----PSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYILLARRFL 251 (281)
T ss_dssp HHHHHHTTTCSEEECCCSCSSCCCC-----HHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCEEEeCCCCCCCCCC-----HHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHHHhhhhc
Confidence 689999999999 999999999999 99999999999877 666789999999999999999999999999999
Q ss_pred CCCccCCCceeEeccchHHHHHHHHhh
Q psy969 79 GPDWLNKDLFRIGASSLLNNILQELEA 105 (106)
Q Consensus 79 Ga~w~~~~~~RiGtSs~~~~l~~~l~~ 105 (106)
|++|++|++||||+|+++++|+++|+.
T Consensus 252 G~~w~~~~~~RiGtSs~~~~l~~~~~~ 278 (281)
T 2a4a_A 252 SSLACHPDNFRIGSSSLVIKLRKVISQ 278 (281)
T ss_dssp C------CCEEEEESSHHHHHHHHHC-
T ss_pred cccccccCceEEecCccHHHHHHHHHh
Confidence 999999999999999999999999863
No 3
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=100.00 E-value=4.4e-33 Score=222.81 Aligned_cols=96 Identities=21% Similarity=0.325 Sum_probs=84.8
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHh---------------hhcCCceeEeec-CCCCCHH
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFH---------------KLSGKKIGLKPA-GGISTFE 65 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~---------------~~~~~~vgiKaa-GGIrt~~ 65 (106)
+|++|+++|||| ||||||+++||| +++|++|++++++|+ ...++++||||| |||||++
T Consensus 171 A~~ia~~AGADFVKTSTGf~~~gAT-----~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e 245 (297)
T 4eiv_A 171 AAVAALEGGADFLQTSSGLGATHAT-----MFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAE 245 (297)
T ss_dssp HHHHHHHHTCSEEECCCSSSSCCCC-----HHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHH
T ss_pred HHHHHHHhCCCEEEcCCCCCCCCCC-----HHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHH
Confidence 789999999999 999999999999 999999999998875 233789999999 9999999
Q ss_pred HHHHHHHHHHhhCCCCccCCCceeEeccc-hHHHHHHHHh
Q psy969 66 DSVRWIYLVLIMLGPDWLNKDLFRIGASS-LLNNILQELE 104 (106)
Q Consensus 66 ~a~~~i~l~~~~lGa~w~~~~~~RiGtSs-~~~~l~~~l~ 104 (106)
||++|++++++ +|.+|++|++||||+|+ +++.|+..++
T Consensus 246 ~A~~~i~~~~e-lG~~wl~~~~fRiGaSs~ll~el~~~~~ 284 (297)
T 4eiv_A 246 TADFLMQMIFE-NGPRSIVRDKFRVGGGFNLLKELRDCYE 284 (297)
T ss_dssp HHHHHHHHHHH-HCGGGCSTTTEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-hCccccCCCceEecccHHHHHHHHHHHh
Confidence 99999999999 99999999999999999 6666655554
No 4
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=99.94 E-value=3.4e-27 Score=181.63 Aligned_cols=82 Identities=26% Similarity=0.316 Sum_probs=76.0
Q ss_pred hhhHHHhhCCCc-ccCCCCC----------CCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHH
Q psy969 3 RPRKVAFKGSNF-RTLHGRG----------PDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 71 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~----------~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i 71 (106)
+|++++++|||| ||||||. ++||| ++++++|++.+++. +++++||+||||||++||++|+
T Consensus 133 a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~gAt-----~~dv~lm~~~i~~~----g~~v~vKaaGGirt~~~al~~i 203 (226)
T 1vcv_A 133 LYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVHST-----PERAAAIARYIKEK----GYRLGVKMAGGIRTREQAKAIV 203 (226)
T ss_dssp HHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSSCC-----HHHHHHHHHHHHHH----TCCCEEEEESSCCSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeCCCCCccccccccCCCCCCC-----HHHHHHHHHHHHHh----CCCceEEEeCCCCCHHHHHHHH
Confidence 689999999999 9999999 89999 99999999998753 7899999999999999999999
Q ss_pred HHHHhhCCCCccCCCceeEeccchHHH
Q psy969 72 YLVLIMLGPDWLNKDLFRIGASSLLNN 98 (106)
Q Consensus 72 ~l~~~~lGa~w~~~~~~RiGtSs~~~~ 98 (106)
+++ + +|++ |++||||+|+++++
T Consensus 204 ~a~-~-~Ga~---~~~fRiGtS~~~~i 225 (226)
T 1vcv_A 204 DAI-G-WGED---PARVRLGTSTPEAL 225 (226)
T ss_dssp HHH-C-SCSC---TTTEEEEESCGGGG
T ss_pred HHH-H-CCCC---cCCceEecCchhhh
Confidence 987 3 7986 99999999999875
No 5
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=99.92 E-value=1.8e-25 Score=175.76 Aligned_cols=75 Identities=33% Similarity=0.509 Sum_probs=70.9
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+|++|+++|||| ||||||++.||| +++|++|++.+ +++++||+||||||++||++|++ +|++
T Consensus 178 A~~ia~eaGADfVKTSTGf~~~GAT-----~edV~lm~~~v-------g~~v~VKaAGGIrt~~~al~mi~-----aGA~ 240 (260)
T 3r12_A 178 ACVISKLAGAHFVKTSTGFGTGGAT-----AEDVHLMKWIV-------GDEMGVKASGGIRTFEDAVKMIM-----YGAD 240 (260)
T ss_dssp HHHHHHHTTCSEEECCCSSSSCCCC-----HHHHHHHHHHH-------CTTSEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHHhCcCEEEcCCCCCCCCCC-----HHHHHHHHHHh-------CCCceEEEeCCCCCHHHHHHHHH-----cCCc
Confidence 799999999999 999999999999 99999999875 78999999999999999999999 7995
Q ss_pred ccCCCceeEeccchHHHHHH
Q psy969 82 WLNKDLFRIGASSLLNNILQ 101 (106)
Q Consensus 82 w~~~~~~RiGtSs~~~~l~~ 101 (106)
|||||++++++.+
T Consensus 241 -------RiGtS~g~~I~~~ 253 (260)
T 3r12_A 241 -------RIGTSSGVKIVQG 253 (260)
T ss_dssp -------EEEESCHHHHHHH
T ss_pred -------eeecchHHHHHHH
Confidence 9999999998865
No 6
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=99.92 E-value=3.6e-25 Score=171.17 Aligned_cols=75 Identities=27% Similarity=0.367 Sum_probs=70.4
Q ss_pred hhhHHHhhCCCc-ccCCCCC-CCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRG-PDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~-~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
+|++++++|||| ||||||. +.||| +++|++|++.+ +++++||+||||||++||++|++ +|+
T Consensus 151 a~~ia~~aGADfVKTSTGf~~~~gAt-----~edv~lm~~~v-------~~~v~VKaaGGIrt~~~a~~~i~-----aGa 213 (231)
T 3ndo_A 151 VCRVARDAGADFVKTSTGFHPSGGAS-----VQAVEIMARTV-------GERLGVKASGGIRTAEQAAAMLD-----AGA 213 (231)
T ss_dssp HHHHHHHTTCSEEECCCSCCTTCSCC-----HHHHHHHHHHH-------TTTSEEEEESSCCSHHHHHHHHH-----TTC
T ss_pred HHHHHHHHCcCEEEcCCCCCCCCCCC-----HHHHHHHHHHh-------CCCceEEEeCCCCCHHHHHHHHH-----hcc
Confidence 689999999999 9999998 89999 99999999885 68999999999999999999999 799
Q ss_pred CccCCCceeEeccchHHHHHH
Q psy969 81 DWLNKDLFRIGASSLLNNILQ 101 (106)
Q Consensus 81 ~w~~~~~~RiGtSs~~~~l~~ 101 (106)
+ |||+|++++++.+
T Consensus 214 ~-------RiGtS~g~~I~~~ 227 (231)
T 3ndo_A 214 T-------RLGLSGSRAVLDG 227 (231)
T ss_dssp S-------EEEESSHHHHHHH
T ss_pred h-------hcccchHHHHHhh
Confidence 5 9999999998764
No 7
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=99.91 E-value=1.1e-24 Score=173.31 Aligned_cols=79 Identities=23% Similarity=0.300 Sum_probs=73.0
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+|++|+++|||| ||||||.+.||| ++++++|++.++. .+.+++||+||||||++||++|++ +|+
T Consensus 193 A~~ia~eaGADfVKTSTGf~~~GAT-----~edv~lmr~~v~~----~g~~v~VKAAGGIrt~edAl~mi~-----aGA- 257 (288)
T 3oa3_A 193 GCVLSSLAGADYVKTSTGFNGPGAS-----IENVSLMSAVCDS----LQSETRVKASGGIRTIEDCVKMVR-----AGA- 257 (288)
T ss_dssp HHHHHHHTTCSEEECCCSSSSCCCC-----HHHHHHHHHHHHH----SSSCCEEEEESSCCSHHHHHHHHH-----TTC-
T ss_pred HHHHHHHcCCCEEEcCCCCCCCCCC-----HHHHHHHHHHHHH----hCCCceEEEeCCCCCHHHHHHHHH-----cCC-
Confidence 689999999999 999999999999 9999999998753 368899999999999999999999 799
Q ss_pred ccCCCceeEeccchHHHHHHH
Q psy969 82 WLNKDLFRIGASSLLNNILQE 102 (106)
Q Consensus 82 w~~~~~~RiGtSs~~~~l~~~ 102 (106)
+|||+|++++++.+.
T Consensus 258 ------~RiGtS~g~~I~~~~ 272 (288)
T 3oa3_A 258 ------ERLGASAGVKIVNET 272 (288)
T ss_dssp ------SEEEESCHHHHHHHH
T ss_pred ------ceeehhhHHHHHHHH
Confidence 599999999988763
No 8
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=99.91 E-value=6.4e-25 Score=170.71 Aligned_cols=75 Identities=29% Similarity=0.428 Sum_probs=70.5
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+|++|+++|||| ||||||+++||| +++|++|++.+ +++++||+||||||++||++|++ +|+
T Consensus 162 a~~ia~~aGADfVKTSTGf~~ggAt-----~~dv~lmr~~v-------g~~v~VKasGGIrt~~da~~~i~-----aGA- 223 (239)
T 3ngj_A 162 VCKRCVAAGAEYVKTSTGFGTHGAT-----PEDVKLMKDTV-------GDKALVKAAGGIRTFDDAMKMIN-----NGA- 223 (239)
T ss_dssp HHHHHHHHTCSEEECCCSSSSCCCC-----HHHHHHHHHHH-------GGGSEEEEESSCCSHHHHHHHHH-----TTE-
T ss_pred HHHHHHHHCcCEEECCCCCCCCCCC-----HHHHHHHHHhh-------CCCceEEEeCCCCCHHHHHHHHH-----hcc-
Confidence 689999999999 999999999999 99999999885 68999999999999999999999 799
Q ss_pred ccCCCceeEeccchHHHHHH
Q psy969 82 WLNKDLFRIGASSLLNNILQ 101 (106)
Q Consensus 82 w~~~~~~RiGtSs~~~~l~~ 101 (106)
.|||+|++++++..
T Consensus 224 ------~riGtS~~~~I~~~ 237 (239)
T 3ngj_A 224 ------SRIGASAGIAILNG 237 (239)
T ss_dssp ------EEEEESCHHHHHHT
T ss_pred ------cceecccHHHHHhc
Confidence 59999999998853
No 9
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=99.90 E-value=5.7e-24 Score=162.52 Aligned_cols=74 Identities=26% Similarity=0.362 Sum_probs=69.1
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+||+++++|||| ||||||.++||| ++++++|++.+ +.+++||+||||||++|+++|++ +|++
T Consensus 138 a~~ia~eaGADfVKTsTGf~~~gat-----~~dv~~m~~~v-------g~~v~VkaaGGirt~~~al~~i~-----aGa~ 200 (220)
T 1ub3_A 138 LAEAAIRGGADFLKTSTGFGPRGAS-----LEDVALLVRVA-------QGRAQVKAAGGIRDRETALRMLK-----AGAS 200 (220)
T ss_dssp HHHHHHHHTCSEEECCCSSSSCCCC-----HHHHHHHHHHH-------TTSSEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHHhCCCEEEeCCCCCCCCCC-----HHHHHHHHHhh-------CCCCeEEEECCCCCHHHHHHHHH-----CCCc
Confidence 689999999999 999999999999 99999999874 68999999999999999999999 7995
Q ss_pred ccCCCceeEeccchHHHHH
Q psy969 82 WLNKDLFRIGASSLLNNIL 100 (106)
Q Consensus 82 w~~~~~~RiGtSs~~~~l~ 100 (106)
|||+|++++++.
T Consensus 201 -------RiG~S~g~~I~~ 212 (220)
T 1ub3_A 201 -------RLGTSSGVALVA 212 (220)
T ss_dssp -------EEEETTHHHHHC
T ss_pred -------ccchhHHHHHHH
Confidence 999999999653
No 10
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=99.87 E-value=1.2e-22 Score=157.00 Aligned_cols=76 Identities=24% Similarity=0.310 Sum_probs=68.7
Q ss_pred hhhHHHhhCCCc-ccCCCCCC-CCCCCCCCCchHHHH--HHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGP-DSTSYGNVCNTCGII--MCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~-~gat~~~~~~~~v~l--m~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
+|++++++|||| ||||||.+ .||| ++++++ |++.+ + ++||+||||||++|+++|++ +
T Consensus 153 a~ria~eaGADfVKTsTG~~~~~gAt-----~~dv~l~~m~~~v-------~--v~VKaaGGirt~~~al~~i~-----a 213 (234)
T 1n7k_A 153 LVDSSRRAGADIVKTSTGVYTKGGDP-----VTVFRLASLAKPL-------G--MGVKASGGIRSGIDAVLAVG-----A 213 (234)
T ss_dssp HHHHHHHTTCSEEESCCSSSCCCCSH-----HHHHHHHHHHGGG-------T--CEEEEESSCCSHHHHHHHHH-----T
T ss_pred HHHHHHHhCCCEEEeCCCCCCCCCCC-----HHHHHHHHHHHHH-------C--CCEEEecCCCCHHHHHHHHH-----c
Confidence 689999999999 99999998 9999 999999 98763 4 99999999999999999998 7
Q ss_pred CCCccCCCceeEeccchHHHHHHHHhh
Q psy969 79 GPDWLNKDLFRIGASSLLNNILQELEA 105 (106)
Q Consensus 79 Ga~w~~~~~~RiGtSs~~~~l~~~l~~ 105 (106)
|++ |||+|++++++. +++.
T Consensus 214 Ga~-------RiG~S~g~~I~~-~~~~ 232 (234)
T 1n7k_A 214 GAD-------IIGTSSAVKVLE-SFKS 232 (234)
T ss_dssp TCS-------EEEETTHHHHHH-HHHC
T ss_pred Ccc-------ccchHHHHHHHH-hhhh
Confidence 995 999999998765 4544
No 11
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.67 E-value=2.1e-16 Score=119.20 Aligned_cols=75 Identities=28% Similarity=0.363 Sum_probs=67.7
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.++++.++|||| ||||||.++|++ .++++.|++.+ ++++.||++|||+|.+||+++++ +|++
T Consensus 137 ~a~~a~eaGad~I~tstg~~~gga~-----~~~i~~v~~~v-------~~~ipVia~GGI~t~~da~~~l~-----aGA~ 199 (225)
T 1mzh_A 137 AVEICIEAGADFIKTSTGFAPRGTT-----LEEVRLIKSSA-------KGRIKVKASGGIRDLETAISMIE-----AGAD 199 (225)
T ss_dssp HHHHHHHHTCSEEECCCSCSSSCCC-----HHHHHHHHHHH-------TTSSEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHHhCCCEEEECCCCCCCCCC-----HHHHHHHHHHh-------CCCCcEEEECCCCCHHHHHHHHH-----hCch
Confidence 478999999999 999999888999 99999998774 57899999999999999999998 7996
Q ss_pred ccCCCceeEeccchHHHHHH
Q psy969 82 WLNKDLFRIGASSLLNNILQ 101 (106)
Q Consensus 82 w~~~~~~RiGtSs~~~~l~~ 101 (106)
|||+|++++++.+
T Consensus 200 -------~iG~s~~~~i~~~ 212 (225)
T 1mzh_A 200 -------RIGTSSGISIAEE 212 (225)
T ss_dssp -------EEEESCHHHHHHH
T ss_pred -------HHHHccHHHHHHH
Confidence 9999999986543
No 12
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.83 E-value=6e-09 Score=80.17 Aligned_cols=70 Identities=19% Similarity=0.037 Sum_probs=55.6
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCC--CHHHHHHHHHHHHhhCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGIS--TFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIr--t~~~a~~~i~l~~~~lG 79 (106)
+|+++.++|||| |||+ | .+ ++.++.|++.. +.+.||++|||+ |.+++++++..+.+ +|
T Consensus 164 a~~~a~~~GAD~vkt~~---~--~~-----~e~~~~~~~~~--------~~~pV~asGGi~~~~~~~~l~~i~~~~~-aG 224 (263)
T 1w8s_A 164 AARIALELGADAMKIKY---T--GD-----PKTFSWAVKVA--------GKVPVLMSGGPKTKTEEDFLKQVEGVLE-AG 224 (263)
T ss_dssp HHHHHHHHTCSEEEEEC---C--SS-----HHHHHHHHHHT--------TTSCEEEECCSCCSSHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHcCCCEEEEcC---C--CC-----HHHHHHHHHhC--------CCCeEEEEeCCCCCCHHHHHHHHHHHHH-cC
Confidence 478999999999 9995 2 36 88888888652 445899999999 99999999965554 78
Q ss_pred CCccCCCceeEeccchHHHHH
Q psy969 80 PDWLNKDLFRIGASSLLNNIL 100 (106)
Q Consensus 80 a~w~~~~~~RiGtSs~~~~l~ 100 (106)
++ |+|.+.+++.
T Consensus 225 A~---------GvsvgraI~~ 236 (263)
T 1w8s_A 225 AL---------GIAVGRNVWQ 236 (263)
T ss_dssp CC---------EEEESHHHHT
T ss_pred Ce---------EEEEehhhcC
Confidence 82 7877776653
No 13
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=98.01 E-value=9.7e-06 Score=64.01 Aligned_cols=61 Identities=15% Similarity=0.079 Sum_probs=50.7
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.++++|+|| ++.+ .+ +++++.+.+. .++++.|++|||| |++.+.+|.+ .|++
T Consensus 222 ~eA~~aGaD~I~ld~------~~-----~e~l~~~v~~-------~~~~~~I~ASGGI-t~~~i~~~a~-----~GvD-- 275 (296)
T 1qap_A 222 DDALKAGADIIMLDN------FN-----TDQMREAVKR-------VNGQARLEVSGNV-TAETLREFAE-----TGVD-- 275 (296)
T ss_dssp HHHHHTTCSEEEESS------CC-----HHHHHHHHHT-------TCTTCCEEECCCS-CHHHHHHHHH-----TTCS--
T ss_pred HHHHHcCCCEEEECC------CC-----HHHHHHHHHH-------hCCCCeEEEECCC-CHHHHHHHHH-----cCCC--
Confidence 4567899999 9987 45 7788777654 3568999999999 9999999999 7996
Q ss_pred CCCceeEeccchH
Q psy969 84 NKDLFRIGASSLL 96 (106)
Q Consensus 84 ~~~~~RiGtSs~~ 96 (106)
+||++++.
T Consensus 276 -----~isvGsli 283 (296)
T 1qap_A 276 -----FISVGALT 283 (296)
T ss_dssp -----EEECSHHH
T ss_pred -----EEEEeHHH
Confidence 99998854
No 14
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.77 E-value=3.4e-05 Score=59.80 Aligned_cols=64 Identities=16% Similarity=0.116 Sum_probs=51.1
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.++++|+|| ++.|. + ++.++.+.+.++. .-+++.|++|||| |.+.+.+|.+ .|++
T Consensus 196 ~~A~~aGaD~I~ld~~------~-----~~~l~~~v~~l~~----~~~~~~i~AsGGI-~~~ni~~~~~-----aGaD-- 252 (273)
T 2b7n_A 196 KNAMNAGADIVMCDNL------S-----VLETKEIAAYRDA----HYPFVLLEASGNI-SLESINAYAK-----SGVD-- 252 (273)
T ss_dssp HHHHHHTCSEEEEETC------C-----HHHHHHHHHHHHH----HCTTCEEEEESSC-CTTTHHHHHT-----TTCS--
T ss_pred HHHHHcCCCEEEECCC------C-----HHHHHHHHHHhhc----cCCCcEEEEECCC-CHHHHHHHHH-----cCCc--
Confidence 4567899999 99882 3 7788877766542 1246999999999 9999999999 7996
Q ss_pred CCCceeEeccchH
Q psy969 84 NKDLFRIGASSLL 96 (106)
Q Consensus 84 ~~~~~RiGtSs~~ 96 (106)
+||+++..
T Consensus 253 -----~i~vGs~i 260 (273)
T 2b7n_A 253 -----AISVGALI 260 (273)
T ss_dssp -----EEECTHHH
T ss_pred -----EEEEcHHh
Confidence 99998864
No 15
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.70 E-value=3.1e-05 Score=60.94 Aligned_cols=64 Identities=16% Similarity=0.100 Sum_probs=51.3
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.++++|+|| +++|. + +++++.+.+.++. ..+++.|++|||| |.+.+.+|.+ .|++
T Consensus 211 ~~A~~aGaD~I~ld~~------~-----~~~l~~~v~~l~~----~~~~~~I~ASGGI-t~~ni~~~~~-----aGaD-- 267 (299)
T 2jbm_A 211 VQAAEAGADLVLLDNF------K-----PEELHPTATVLKA----QFPSVAVEASGGI-TLDNLPQFCG-----PHID-- 267 (299)
T ss_dssp HHHHHTTCSEEEEESC------C-----HHHHHHHHHHHHH----HCTTSEEEEESSC-CTTTHHHHCC-----TTCC--
T ss_pred HHHHHcCCCEEEECCC------C-----HHHHHHHHHHhhc----cCCCeeEEEECCC-CHHHHHHHHH-----CCCC--
Confidence 3567899999 99883 4 7788877776542 1356999999999 9999999999 7996
Q ss_pred CCCceeEeccchH
Q psy969 84 NKDLFRIGASSLL 96 (106)
Q Consensus 84 ~~~~~RiGtSs~~ 96 (106)
+||++++.
T Consensus 268 -----~i~vGs~i 275 (299)
T 2jbm_A 268 -----VISMGMLT 275 (299)
T ss_dssp -----EEECTHHH
T ss_pred -----EEEEChhh
Confidence 99999854
No 16
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=97.44 E-value=5.2e-05 Score=59.54 Aligned_cols=66 Identities=14% Similarity=0.137 Sum_probs=33.9
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.++++|+|| ++.|+ + +++++.+.+.++.... --+++.|++|||| |.+.+.+|.+ .|++
T Consensus 213 ~~A~~aGaD~I~ld~~------~-----~~~l~~~v~~l~~~~~-g~~~v~I~ASGGI-t~~ni~~~~~-----~GvD-- 272 (294)
T 3c2e_A 213 TEAIEAGADVIMLDNF------K-----GDGLKMCAQSLKNKWN-GKKHFLLECSGGL-NLDNLEEYLC-----DDID-- 272 (294)
T ss_dssp HHHHHHTCSEEECCC---------------------------------CCEEEEECCC-CC------CC-----CSCS--
T ss_pred HHHHHcCCCEEEECCC------C-----HHHHHHHHHHhccccc-CCCCeEEEEECCC-CHHHHHHHHH-----cCCC--
Confidence 3567899999 99883 3 6666666655421000 0024999999999 9999999999 7996
Q ss_pred CCCceeEeccch
Q psy969 84 NKDLFRIGASSL 95 (106)
Q Consensus 84 ~~~~~RiGtSs~ 95 (106)
+||++++
T Consensus 273 -----~i~vGs~ 279 (294)
T 3c2e_A 273 -----IYSTSSI 279 (294)
T ss_dssp -----EEECGGG
T ss_pred -----EEEEech
Confidence 9999876
No 17
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=97.42 E-value=0.00051 Score=50.24 Aligned_cols=61 Identities=23% Similarity=0.223 Sum_probs=44.6
Q ss_pred hhHHHhhCCCc--ccCCCCCCCC--CCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 4 PRKVAFKGSNF--RTLHGRGPDS--TSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~~g--at~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
++.+.++|+|| +|..|+.+.. .. ..++.++.+..+ . .+-|.++|||+|.+++.++++ +|
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~~~~-----~~~~~~i~~~~~------~-~ipvia~GGI~s~~~~~~~~~-----~G 208 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSRQEA-----GPDVALIEALCK------A-GIAVIAEGKIHSPEEAKKIND-----LG 208 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSCCSS-----SCCHHHHHHHHH------T-TCCEEEESCCCSHHHHHHHHT-----TC
T ss_pred HHHHHHcCCCEEeeeccccCCCCcCCC-----CCCHHHHHHHHh------C-CCCEEEECCCCCHHHHHHHHH-----CC
Confidence 35678899999 4888876532 12 335555554432 2 688999999999999999999 79
Q ss_pred CC
Q psy969 80 PD 81 (106)
Q Consensus 80 a~ 81 (106)
++
T Consensus 209 ad 210 (234)
T 1yxy_A 209 VA 210 (234)
T ss_dssp CS
T ss_pred CC
Confidence 86
No 18
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=97.27 E-value=0.00048 Score=54.31 Aligned_cols=57 Identities=16% Similarity=0.204 Sum_probs=39.8
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCC-CHHHHHHHHHHHHhhCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGIS-TFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIr-t~~~a~~~i~l~~~~lGa 80 (106)
++++|.+.|||| ||+ |. +.+ |.+..+ ..++.|+++||++ +.+++++++..+.+ +|+
T Consensus 194 aariA~elGAD~VKt~--~t--~e~-----------~~~vv~------~~~vPVv~~GG~~~~~~~~l~~v~~ai~-aGA 251 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTY--YV--EKG-----------FERIVA------GCPVPIVIAGGKKLPEREALEMCWQAID-QGA 251 (295)
T ss_dssp HHHHHHHTTCSEEEEE--CC--TTT-----------HHHHHH------TCSSCEEEECCSCCCHHHHHHHHHHHHH-TTC
T ss_pred HHHHHHHhCCCEEEeC--CC--HHH-----------HHHHHH------hCCCcEEEEECCCCCHHHHHHHHHHHHH-hCC
Confidence 688999999999 998 32 122 222221 2458899999999 67788888755544 587
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
.
T Consensus 252 ~ 252 (295)
T 3glc_A 252 S 252 (295)
T ss_dssp S
T ss_pred e
Confidence 3
No 19
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=97.15 E-value=0.0016 Score=50.42 Aligned_cols=35 Identities=17% Similarity=0.238 Sum_probs=28.2
Q ss_pred HHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 42 IKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 42 i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+++.++.+++++-|.++|||+|.++|.++++ +|++
T Consensus 279 i~~i~~~~~~~ipVi~~GGI~~~~da~~~l~-----~GAd 313 (336)
T 1f76_A 279 IRRLSLELNGRLPIIGVGGIDSVIAAREKIA-----AGAS 313 (336)
T ss_dssp HHHHHHHHTTSSCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHHHhCCCCCEEEECCCCCHHHHHHHHH-----CCCC
Confidence 3333444566899999999999999999999 5986
No 20
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=96.83 E-value=0.0021 Score=47.97 Aligned_cols=58 Identities=19% Similarity=0.058 Sum_probs=39.4
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCC--HHHHHHHHHHHHhhCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGIST--FEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt--~~~a~~~i~l~~~~lGa 80 (106)
++.+.++|+|| +|+. +.. ++.++.+++. -++.|+++|||++ .+++++++..+.+ +|+
T Consensus 172 a~~a~~~Gad~i~~~~-----~~~-----~~~l~~i~~~---------~~ipvva~GGi~~~~~~~~~~~~~~~~~-~Ga 231 (273)
T 2qjg_A 172 ARLGAELGADIVKTSY-----TGD-----IDSFRDVVKG---------CPAPVVVAGGPKTNTDEEFLQMIKDAME-AGA 231 (273)
T ss_dssp HHHHHHTTCSEEEECC-----CSS-----HHHHHHHHHH---------CSSCEEEECCSCCSSHHHHHHHHHHHHH-HTC
T ss_pred HHHHHHcCCCEEEECC-----CCC-----HHHHHHHHHh---------CCCCEEEEeCCCCCCHHHHHHHHHHHHH-cCC
Confidence 47788999999 9982 133 4444433322 2589999999995 8898777654332 587
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
+
T Consensus 232 ~ 232 (273)
T 2qjg_A 232 A 232 (273)
T ss_dssp S
T ss_pred c
Confidence 5
No 21
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=96.69 E-value=0.0036 Score=50.32 Aligned_cols=73 Identities=16% Similarity=0.141 Sum_probs=44.3
Q ss_pred hhHHHhhCCCc--ccCCCCCCCCC-------CCCCCCchHH-HHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF--RTLHGRGPDST-------SYGNVCNTCG-IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYL 73 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~~ga-------t~~~~~~~~v-~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l 73 (106)
++.+.++|+|+ -|.|..+-... ..+-..-..+ .+-.+.+++.++.+++++-|-++|||+|.+||.+++.
T Consensus 240 a~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~~~l~- 318 (367)
T 3zwt_A 240 ASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDALEKIR- 318 (367)
T ss_dssp HHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHH-
T ss_pred HHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHHHHHH-
Confidence 56788999999 45554321100 0000001111 1112333444455677899999999999999999999
Q ss_pred HHhhCCCC
Q psy969 74 VLIMLGPD 81 (106)
Q Consensus 74 ~~~~lGa~ 81 (106)
+|++
T Consensus 319 ----~GAd 322 (367)
T 3zwt_A 319 ----AGAS 322 (367)
T ss_dssp ----HTCS
T ss_pred ----cCCC
Confidence 5986
No 22
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.54 E-value=0.0069 Score=46.12 Aligned_cols=37 Identities=22% Similarity=0.350 Sum_probs=29.8
Q ss_pred HHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 40 SAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 40 ~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+++.++.+++++-|-++|||+|.+||.+++. +|++
T Consensus 230 ~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~-----~GAd 266 (311)
T 1jub_A 230 ANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLL-----CGAT 266 (311)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHH-----cCCC
Confidence 344455555666899999999999999999998 5986
No 23
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.41 E-value=0.019 Score=46.27 Aligned_cols=64 Identities=16% Similarity=0.091 Sum_probs=44.1
Q ss_pred hhHHHhhCCCc-c-cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-R-TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-K-TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.+.++|+|+ . +.+|....... +..++.+.+..+. +++++-|=++|||++.+|+.+.+. +|++
T Consensus 231 A~~a~~~GaD~I~vsn~GG~~~d~~-----~~~~~~L~~i~~a----v~~~ipVia~GGI~~g~Dv~kaLa-----lGA~ 296 (352)
T 3sgz_A 231 AELAMKHNVQGIVVSNHGGRQLDEV-----SASIDALREVVAA----VKGKIEVYMDGGVRTGTDVLKALA-----LGAR 296 (352)
T ss_dssp HHHHHHTTCSEEEECCGGGTSSCSS-----CCHHHHHHHHHHH----HTTSSEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHcCCCEEEEeCCCCCccCCC-----ccHHHHHHHHHHH----hCCCCeEEEECCCCCHHHHHHHHH-----cCCC
Confidence 46789999999 4 33432111112 4455555544332 356899999999999999999999 7996
No 24
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.32 E-value=0.0087 Score=47.87 Aligned_cols=67 Identities=19% Similarity=0.130 Sum_probs=41.5
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.++++|||| +.+.|-+....| .+.|-++.+..+.+..++ ..+-|-++|||++.+++.+++.
T Consensus 159 A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~------~~iPVIA~GGI~~~~di~kala----- 227 (361)
T 3khj_A 159 TKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASK------FGIPIIADGGIRYSGDIGKALA----- 227 (361)
T ss_dssp HHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHH------HTCCEEEESCCCSHHHHHHHHH-----
T ss_pred HHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhh------cCCeEEEECCCCCHHHHHHHHH-----
Confidence 56788999999 984332211011 011113334444333322 2478999999999999999999
Q ss_pred CCCC
Q psy969 78 LGPD 81 (106)
Q Consensus 78 lGa~ 81 (106)
+|++
T Consensus 228 ~GAd 231 (361)
T 3khj_A 228 VGAS 231 (361)
T ss_dssp HTCS
T ss_pred cCCC
Confidence 5886
No 25
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=96.22 E-value=0.004 Score=51.34 Aligned_cols=69 Identities=17% Similarity=0.076 Sum_probs=44.9
Q ss_pred hhHHHhhCCCc--ccCCCCCC----------CCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHH
Q psy969 4 PRKVAFKGSNF--RTLHGRGP----------DSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 71 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~----------~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i 71 (106)
++.+.++|+|. -|.|.... .|-+ |.+ .-..-.+.|+++++.+++++-|=+.|||+|.+||.+++
T Consensus 289 A~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlS-G~a---~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l 364 (415)
T 3i65_A 289 ADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS-GAK---LKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI 364 (415)
T ss_dssp HHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEE-EGG---GHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHH
T ss_pred HHHHHHcCCcEEEEeCCCcccccccccccccCCcC-Ccc---chHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH
Confidence 57788999999 55554321 1111 111 11122233444455567789999999999999999999
Q ss_pred HHHHhhCCCC
Q psy969 72 YLVLIMLGPD 81 (106)
Q Consensus 72 ~l~~~~lGa~ 81 (106)
. +|++
T Consensus 365 ~-----aGAd 369 (415)
T 3i65_A 365 E-----AGAS 369 (415)
T ss_dssp H-----HTEE
T ss_pred H-----cCCC
Confidence 9 5985
No 26
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=96.22 E-value=0.015 Score=46.91 Aligned_cols=64 Identities=16% Similarity=0.133 Sum_probs=43.3
Q ss_pred hhHHHhhCCCc-ccCC-CCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTLH-GRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTST-G~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.+.++|+|+ ..|. |-...... +..+..+.+..+ .+++++-|=++|||++.+|+.+++. +|++
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g-----~~~~~~l~~v~~----av~~~ipVia~GGI~~g~Dv~kala-----lGAd 331 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGV-----PATIDVLPEIVE----AVEGKVEVFLDGGVRKGTDVLKALA-----LGAK 331 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTC-----CCHHHHHHHHHH----HHTTSSEEEECSSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCC-----cChHHHHHHHHH----HcCCCCEEEEECCCCCHHHHHHHHH-----hCCC
Confidence 46788999999 5543 21111122 334444443332 2356799999999999999999999 7996
No 27
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=96.21 E-value=0.0052 Score=46.86 Aligned_cols=35 Identities=20% Similarity=0.253 Sum_probs=27.9
Q ss_pred HHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 41 AIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 41 ~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+++.++.+ +++-|-++|||+|.+++.+++. +|++
T Consensus 234 ~i~~v~~~~-~~ipvi~~GGI~~~~da~~~l~-----~GAd 268 (314)
T 2e6f_A 234 NVNAFYRRC-PDKLVFGCGGVYSGEDAFLHIL-----AGAS 268 (314)
T ss_dssp HHHHHHHHC-TTSEEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHHHhc-CCCCEEEECCCCCHHHHHHHHH-----cCCC
Confidence 334444445 6799999999999999999998 5986
No 28
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=96.11 E-value=0.011 Score=48.74 Aligned_cols=73 Identities=23% Similarity=0.279 Sum_probs=47.8
Q ss_pred hhHHHhhCCCc-ccCCCCCCCC--CCC-----CCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDS--TSY-----GNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 75 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~g--at~-----~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~ 75 (106)
++.++++|+|| +. |.++.+ .+- +-|=.+.+..+.++.+++.+..+..+-|=++|||++..|+...+.
T Consensus 298 a~~l~~aGad~I~V--g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAla--- 372 (503)
T 1me8_A 298 FRYLADAGADFIKI--GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALA--- 372 (503)
T ss_dssp HHHHHHHTCSEEEE--CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHH---
T ss_pred HHHHHHhCCCeEEe--cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHH---
Confidence 56788999999 87 443322 110 111133444555554544444555688999999999999999999
Q ss_pred hhCCCCcc
Q psy969 76 IMLGPDWL 83 (106)
Q Consensus 76 ~~lGa~w~ 83 (106)
+||+.+
T Consensus 373 --lGA~~V 378 (503)
T 1me8_A 373 --MGADFI 378 (503)
T ss_dssp --TTCSEE
T ss_pred --cCCCEE
Confidence 799743
No 29
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.08 E-value=0.013 Score=47.66 Aligned_cols=70 Identities=17% Similarity=0.159 Sum_probs=44.3
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.+.++|+|| +.|.|-+....+ .+.|-.+.+..+.+..+ ..++-|=++|||++.+++.+.+.
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~------~~~ipvia~GGI~~~~di~kala----- 360 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVAR------KYDVPIIADGGIRYSGDIVKALA----- 360 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHH------TTTCCEEEESCCCSHHHHHHHHH-----
T ss_pred HHHHHHcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHh------hcCCCEEEECCcCCHHHHHHHHH-----
Confidence 35678899999 886653211100 00111333444443332 23688999999999999999999
Q ss_pred CCCCccC
Q psy969 78 LGPDWLN 84 (106)
Q Consensus 78 lGa~w~~ 84 (106)
+|++.+.
T Consensus 361 ~GAd~V~ 367 (494)
T 1vrd_A 361 AGAESVM 367 (494)
T ss_dssp TTCSEEE
T ss_pred cCCCEEE
Confidence 7997543
No 30
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.02 E-value=0.021 Score=45.66 Aligned_cols=64 Identities=11% Similarity=0.031 Sum_probs=42.7
Q ss_pred hhHHHhhCCCc-ccCC-CCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTLH-GRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTST-G~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.+.++|+|+ .-|. |....... +..+..+.+..+ .+++++-|=++|||++.+|+.+++. +|++
T Consensus 243 a~~a~~~Gad~I~vs~~ggr~~~~g-----~~~~~~l~~v~~----~v~~~ipVia~GGI~~g~D~~kala-----lGAd 308 (368)
T 2nli_A 243 ADMAIKRGASGIWVSNHGARQLYEA-----PGSFDTLPAIAE----RVNKRVPIVFDSGVRRGEHVAKALA-----SGAD 308 (368)
T ss_dssp HHHHHHTTCSEEEECCGGGTSCSSC-----CCHHHHHHHHHH----HHTTSSCEEECSSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHcCCCEEEEcCCCcCCCCCC-----CChHHHHHHHHH----HhCCCCeEEEECCCCCHHHHHHHHH-----cCCC
Confidence 46788999999 5543 32111111 334444443322 2356799999999999999999999 7986
No 31
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=95.95 E-value=0.017 Score=45.82 Aligned_cols=73 Identities=16% Similarity=0.118 Sum_probs=44.1
Q ss_pred hhHHHhhCCCc-ccCCCCCC----CCCCCCCCCchHHHHHHHHHHHHhhhcCCc-eeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGP----DSTSYGNVCNTCGIIMCSAIKHFHKLSGKK-IGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~----~gat~~~~~~~~v~lm~~~i~~~~~~~~~~-vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.++++|+|+ +-++|-.. .+.. -|-.+.+..+.++..++...++++ +-|=++|||++.+|+.+++.
T Consensus 225 a~~~~~~Gad~i~vg~Gg~~~~~~~~~g--~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kala----- 297 (393)
T 2qr6_A 225 ALHMMRTGAVGIIVGGGENTNSLALGME--VSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIA----- 297 (393)
T ss_dssp HHHHHTTTCSEEEESCCSCCHHHHTSCC--CCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHH-----
T ss_pred HHHHHHcCCCEEEECCCcccccccCCCC--CChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHH-----
Confidence 45678899999 87774210 0111 111333444344321111113444 88999999999999999999
Q ss_pred CCCCcc
Q psy969 78 LGPDWL 83 (106)
Q Consensus 78 lGa~w~ 83 (106)
+|++.+
T Consensus 298 lGA~~V 303 (393)
T 2qr6_A 298 CGADAV 303 (393)
T ss_dssp HTCSEE
T ss_pred cCCCEE
Confidence 698754
No 32
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=95.74 E-value=0.018 Score=44.78 Aligned_cols=25 Identities=32% Similarity=0.502 Sum_probs=23.0
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++-|=++|||++.+|+.+++. +|++
T Consensus 256 ~ipvia~GGI~~~~d~~kal~-----~GAd 280 (332)
T 1vcf_A 256 HLPLVASGGVYTGTDGAKALA-----LGAD 280 (332)
T ss_dssp SSCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred CCeEEEECCCCCHHHHHHHHH-----hCCC
Confidence 588999999999999999999 5986
No 33
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=95.71 E-value=0.024 Score=46.87 Aligned_cols=73 Identities=18% Similarity=0.095 Sum_probs=45.8
Q ss_pred hhHHHhhCCCc--ccCCCCCCCCC-C----CCCCCchH-HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF--RTLHGRGPDST-S----YGNVCNTC-GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 75 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~~ga-t----~~~~~~~~-v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~ 75 (106)
++.+.++|+|+ -|.|....... + .+-..-.. -..-.+.++++++.+++++-|=++|||+|.+||.+++.
T Consensus 317 A~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l~--- 393 (443)
T 1tv5_A 317 ADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKIE--- 393 (443)
T ss_dssp HHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHHH---
T ss_pred HHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHHH---
Confidence 56788999999 66665421111 0 00000111 11223444555555677899999999999999999999
Q ss_pred hhCCCC
Q psy969 76 IMLGPD 81 (106)
Q Consensus 76 ~~lGa~ 81 (106)
+|++
T Consensus 394 --aGAd 397 (443)
T 1tv5_A 394 --AGAS 397 (443)
T ss_dssp --TTEE
T ss_pred --cCCC
Confidence 7985
No 34
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.59 E-value=0.031 Score=45.65 Aligned_cols=68 Identities=19% Similarity=0.134 Sum_probs=41.0
Q ss_pred hhHHHhhCCCc-ccCCCCCCCC--CCC--CCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDS--TSY--GNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~g--at~--~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
++.++++|||+ +.+ .++.. .+. ...-...+.++.+..+.. ....+-|-++|||++.+++.+++. +
T Consensus 198 A~~a~~aGAD~I~vG--~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~---~~~~IPVIA~GGI~~~~di~kala-----l 267 (400)
T 3ffs_A 198 TKELIENGADGIKVG--IGPGSICTTRIVAGVGVPQITAIEKCSSVA---SKFGIPIIADGGIRYSGDIGKALA-----V 267 (400)
T ss_dssp HHHHHHTTCSEEEEC--C---------CCSCBCCCHHHHHHHHHHHH---TTTTCCEEEESCCCSHHHHHHHHT-----T
T ss_pred HHHHHHcCCCEEEEe--CCCCcCcccccccccchhHHHHHHHHHHHH---HhcCCCEEecCCCCCHHHHHHHHH-----c
Confidence 46788999999 973 32211 110 000023444444333221 123688999999999999999999 7
Q ss_pred CCC
Q psy969 79 GPD 81 (106)
Q Consensus 79 Ga~ 81 (106)
|++
T Consensus 268 GAd 270 (400)
T 3ffs_A 268 GAS 270 (400)
T ss_dssp TCS
T ss_pred CCC
Confidence 986
No 35
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=95.42 E-value=0.032 Score=44.33 Aligned_cols=64 Identities=14% Similarity=0.117 Sum_probs=42.9
Q ss_pred hhHHHhhCCCc-ccCCCCCCC-CCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPD-STSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~-gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.+.++|+|+ +-|+..+.. ... +..+..+.+.. +..++++-|=++|||++.+|+.+++. +|++
T Consensus 239 a~~a~~~Gad~I~vs~~ggr~~~~~-----~~~~~~l~~v~----~~~~~~ipvia~GGI~~~~D~~k~l~-----~GAd 304 (370)
T 1gox_A 239 ARLAVQHGAAGIIVSNHGARQLDYV-----PATIMALEEVV----KAAQGRIPVFLDGGVRRGTDVFKALA-----LGAA 304 (370)
T ss_dssp HHHHHHTTCSEEEECCGGGTSSTTC-----CCHHHHHHHHH----HHTTTSSCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHHcCCCEEEECCCCCccCCCc-----ccHHHHHHHHH----HHhCCCCEEEEECCCCCHHHHHHHHH-----cCCC
Confidence 46788999999 765432211 011 33444443332 22456799999999999999999999 6986
No 36
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.30 E-value=0.027 Score=42.33 Aligned_cols=25 Identities=20% Similarity=0.385 Sum_probs=22.7
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++-|-++|||+|.+++.++++ +|++
T Consensus 241 ~ipvia~GGI~~~~d~~~~l~-----~GAd 265 (311)
T 1ep3_A 241 DIPIIGMGGVANAQDVLEMYM-----AGAS 265 (311)
T ss_dssp SSCEEECSSCCSHHHHHHHHH-----HTCS
T ss_pred CCCEEEECCcCCHHHHHHHHH-----cCCC
Confidence 678999999999999999998 5886
No 37
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=95.22 E-value=0.042 Score=43.62 Aligned_cols=69 Identities=20% Similarity=0.238 Sum_probs=42.5
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.++++|+|| +.+.|-+....+ .+.|-++.+..+.++.+ ..++-|=++|||+|..|+.+.+.
T Consensus 175 A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~------~~~ipvIa~GGI~~g~di~kAla----- 243 (351)
T 2c6q_A 175 VEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAH------GLKGHIISDGGCSCPGDVAKAFG----- 243 (351)
T ss_dssp HHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHH------HTTCEEEEESCCCSHHHHHHHHH-----
T ss_pred HHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHh------hcCCcEEEeCCCCCHHHHHHHHH-----
Confidence 46789999999 887542110000 00011233333333322 12588899999999999999999
Q ss_pred CCCCcc
Q psy969 78 LGPDWL 83 (106)
Q Consensus 78 lGa~w~ 83 (106)
+|++.+
T Consensus 244 lGA~~V 249 (351)
T 2c6q_A 244 AGADFV 249 (351)
T ss_dssp TTCSEE
T ss_pred cCCCce
Confidence 799754
No 38
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.14 E-value=0.035 Score=44.71 Aligned_cols=68 Identities=22% Similarity=0.194 Sum_probs=41.0
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCC----CCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYG----NVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~----~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
++.++++|||| +. |++|.+.... .+-...+..+.+..+ ..+ ...+-|=++|||++.+++.+.+. +
T Consensus 163 A~~a~~aGAD~I~v--G~gpGs~~~tr~~~g~g~p~~~~l~~v~~-~~~--~~~iPVIA~GGI~~~~di~kala-----~ 232 (366)
T 4fo4_A 163 ARALIEAGVSAVKV--GIGPGSICTTRIVTGVGVPQITAIADAAG-VAN--EYGIPVIADGGIRFSGDISKAIA-----A 232 (366)
T ss_dssp HHHHHHHTCSEEEE--CSSCSTTBCHHHHHCCCCCHHHHHHHHHH-HHG--GGTCCEEEESCCCSHHHHHHHHH-----T
T ss_pred HHHHHHcCCCEEEE--ecCCCCCCCcccccCcccchHHHHHHHHH-HHh--hcCCeEEEeCCCCCHHHHHHHHH-----c
Confidence 46788999999 87 4444321100 000223444443322 111 12477889999999999999999 7
Q ss_pred CCC
Q psy969 79 GPD 81 (106)
Q Consensus 79 Ga~ 81 (106)
|++
T Consensus 233 GAd 235 (366)
T 4fo4_A 233 GAS 235 (366)
T ss_dssp TCS
T ss_pred CCC
Confidence 886
No 39
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=95.09 E-value=0.12 Score=36.93 Aligned_cols=65 Identities=14% Similarity=0.089 Sum_probs=40.6
Q ss_pred hHHHhhCCCc-ccCC-CCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLH-GRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTST-G~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.+.|+|| .++. ||...... ...-...++.+.+..+ .. ++-|=++|||+|.+++.++++ +|++
T Consensus 133 ~~~~~~G~d~i~~~~~g~t~~~~~-~~~~~~~~~~~~~~~~----~~--~ipvia~GGI~~~~~~~~~~~-----~Gad 199 (223)
T 1y0e_A 133 KNAARLGFDYIGTTLHGYTSYTQG-QLLYQNDFQFLKDVLQ----SV--DAKVIAEGNVITPDMYKRVMD-----LGVH 199 (223)
T ss_dssp HHHHHTTCSEEECTTTTSSTTSTT-CCTTHHHHHHHHHHHH----HC--CSEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHcCCCEEEeCCCcCcCCCCC-CCCCcccHHHHHHHHh----hC--CCCEEEecCCCCHHHHHHHHH-----cCCC
Confidence 3467889999 8754 44321111 0001334454443322 22 477889999999999999999 7985
No 40
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=95.05 E-value=0.0089 Score=42.70 Aligned_cols=59 Identities=25% Similarity=0.334 Sum_probs=41.1
Q ss_pred hhHHHhhCCCc-ccCCCCCCC---CCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPD---STSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~---gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
.+.+.+.|+|| .+.+||... ..+ ++.++.+++. . +++-|-+.|||+ .+++.++++ +|
T Consensus 120 ~~~~~~~g~d~i~v~~g~~g~~~~~~~-----~~~i~~l~~~-------~-~~~~i~~~gGI~-~~~~~~~~~-----~G 180 (211)
T 3f4w_A 120 VRLLEEAGADMLAVHTGTDQQAAGRKP-----IDDLITMLKV-------R-RKARIAVAGGIS-SQTVKDYAL-----LG 180 (211)
T ss_dssp HHHHHHHTCCEEEEECCHHHHHTTCCS-----HHHHHHHHHH-------C-SSCEEEEESSCC-TTTHHHHHT-----TC
T ss_pred HHHHHHcCCCEEEEcCCCcccccCCCC-----HHHHHHHHHH-------c-CCCcEEEECCCC-HHHHHHHHH-----cC
Confidence 46778899999 988875311 112 4444444332 2 357888999997 999999998 79
Q ss_pred CC
Q psy969 80 PD 81 (106)
Q Consensus 80 a~ 81 (106)
++
T Consensus 181 ad 182 (211)
T 3f4w_A 181 PD 182 (211)
T ss_dssp CS
T ss_pred CC
Confidence 86
No 41
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=95.03 E-value=0.051 Score=43.92 Aligned_cols=68 Identities=19% Similarity=0.126 Sum_probs=44.2
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
+.++++|+|+ +.+.|.+....| .+.|-++.++.+.++.+ ..++-|=++|||++.+|+.+.+. +
T Consensus 289 ~~~~~~Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~------~~~ipvia~GGi~~~~di~kal~-----~ 357 (491)
T 1zfj_A 289 RALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAR------EYGKTIIADGGIKYSGDIVKALA-----A 357 (491)
T ss_dssp HHHHHTTCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHH------HTTCEEEEESCCCSHHHHHHHHH-----T
T ss_pred HHHHHcCCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHh------hcCCCEEeeCCCCCHHHHHHHHH-----c
Confidence 4678899999 998775421111 12232444444443322 13467789999999999999998 7
Q ss_pred CCCcc
Q psy969 79 GPDWL 83 (106)
Q Consensus 79 Ga~w~ 83 (106)
|++.+
T Consensus 358 GA~~v 362 (491)
T 1zfj_A 358 GGNAV 362 (491)
T ss_dssp TCSEE
T ss_pred CCcce
Confidence 88743
No 42
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=94.96 E-value=0.068 Score=41.74 Aligned_cols=68 Identities=19% Similarity=0.192 Sum_probs=41.3
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.++++|||+ ..|++-+..-.+ .+.|.. ....+.+.. +.. ++-|=++|||++..|+.+++.
T Consensus 163 A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~-~~~~l~~v~----~~~--~ipVIa~GGI~~g~Dv~kala----- 230 (336)
T 1ypf_A 163 VRELENAGADATKVGIGPGKVCITKIKTGFGTGGW-QLAALRWCA----KAA--SKPIIADGGIRTNGDVAKSIR----- 230 (336)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTC-HHHHHHHHH----HTC--SSCEEEESCCCSTHHHHHHHH-----
T ss_pred HHHHHHcCCCEEEEecCCCceeecccccCcCCchh-HHHHHHHHH----HHc--CCcEEEeCCCCCHHHHHHHHH-----
Confidence 46789999999 765531110000 000000 233333332 222 677889999999999999999
Q ss_pred CCCCcc
Q psy969 78 LGPDWL 83 (106)
Q Consensus 78 lGa~w~ 83 (106)
+|++.+
T Consensus 231 lGAdaV 236 (336)
T 1ypf_A 231 FGATMV 236 (336)
T ss_dssp TTCSEE
T ss_pred cCCCEE
Confidence 798754
No 43
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=94.94 E-value=0.089 Score=41.75 Aligned_cols=57 Identities=11% Similarity=0.052 Sum_probs=39.7
Q ss_pred HHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 6 KVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 6 iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.+.|.++ -.-.+. ...+ ++.|+.+++. +++.+-|-+-|||||.+|+.++++ +|++
T Consensus 194 ~gad~G~~lV~LD~~~--~~v~-----~e~V~~I~~~-------~~~~iPV~vGGGIrs~Eda~~ll~-----aGAD 251 (286)
T 3vk5_A 194 VARAFGFHMVYLYSRN--EHVP-----PEVVRHFRKG-------LGPDQVLFVSGNVRSGRQVTEYLD-----SGAD 251 (286)
T ss_dssp HHHHTTCSEEEEECSS--SCCC-----HHHHHHHHHH-------SCTTCEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHcCCCEEEEcCCC--CcCC-----HHHHHHHHHh-------cCCCCCEEEEeCCCCHHHHHHHHH-----cCCC
Confidence 345566677 554332 3455 5666666554 333688999999999999999999 7996
No 44
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.62 E-value=0.11 Score=38.85 Aligned_cols=68 Identities=12% Similarity=0.050 Sum_probs=44.4
Q ss_pred hhHHHhhCCCc-c-cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-R-TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-K-TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.+.++|+|| - |..||.+..-+ . ..+..++.+..+ . ++-|=++|||+|.+++.++++ +|++
T Consensus 142 a~~a~~~Gad~Ig~~~~g~t~~~~~-~---~~~~~~i~~l~~------~-~ipvIA~GGI~t~~d~~~~~~-----~Gad 205 (232)
T 3igs_A 142 GLACQRLGADIIGTTMSGYTTPDTP-E---EPDLPLVKALHD------A-GCRVIAEGRYNSPALAAEAIR-----YGAW 205 (232)
T ss_dssp HHHHHHTTCSEEECTTTTSSSSSCC-S---SCCHHHHHHHHH------T-TCCEEEESCCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHhCCCCEEEEcCccCCCCCCC-C---CCCHHHHHHHHh------c-CCcEEEECCCCCHHHHHHHHH-----cCCC
Confidence 35678899999 6 45666432211 0 224455443321 1 566779999999999999999 7985
Q ss_pred ccCCCceeEec
Q psy969 82 WLNKDLFRIGA 92 (106)
Q Consensus 82 w~~~~~~RiGt 92 (106)
..-+|+
T Consensus 206 -----gV~VGs 211 (232)
T 3igs_A 206 -----AVTVGS 211 (232)
T ss_dssp -----EEEECH
T ss_pred -----EEEEeh
Confidence 555664
No 45
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=94.51 E-value=0.064 Score=42.68 Aligned_cols=69 Identities=23% Similarity=0.184 Sum_probs=40.6
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCC-----CCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDST-----SYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~ga-----t~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.+.++|+|| .-+.|-+.... ..+.|-.+.+..+.+..+ ..++-|=++|||+|.+++.+++.
T Consensus 208 a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~------~~~ipVia~GGI~~~~d~~~ala----- 276 (404)
T 1eep_A 208 ALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACN------NTNICIIADGGIRFSGDVVKAIA----- 276 (404)
T ss_dssp HHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHT------TSSCEEEEESCCCSHHHHHHHHH-----
T ss_pred HHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHh------hcCceEEEECCCCCHHHHHHHHH-----
Confidence 46788999999 77322111000 001111223333333221 23688889999999999999999
Q ss_pred CCCCcc
Q psy969 78 LGPDWL 83 (106)
Q Consensus 78 lGa~w~ 83 (106)
+|++.+
T Consensus 277 ~GAd~V 282 (404)
T 1eep_A 277 AGADSV 282 (404)
T ss_dssp HTCSEE
T ss_pred cCCCHH
Confidence 588743
No 46
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=94.48 E-value=0.03 Score=44.65 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=30.1
Q ss_pred HHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 40 SAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 40 ~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+++.++.+++++-|-+.|||+|.+||.+++. +|++
T Consensus 263 ~~v~~i~~~~~~~ipIIg~GGI~s~~da~~~l~-----aGAd 299 (345)
T 3oix_A 263 ANVHAFYKRLNPSIQIIGTGGVXTGRDAFEHIL-----CGAS 299 (345)
T ss_dssp HHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHHHHHcCCCCcEEEECCCCChHHHHHHHH-----hCCC
Confidence 344455555677899999999999999999998 5986
No 47
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=94.44 E-value=0.067 Score=44.09 Aligned_cols=66 Identities=20% Similarity=0.240 Sum_probs=41.2
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCC--C-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDST--S-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 75 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~ga--t-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~ 75 (106)
++.++++|||| +-+-| +.+. + .+ ..++..+.+..+... ...+-|=++|||++.+++.+++.
T Consensus 284 a~~l~~aGaD~I~vg~g--~Gs~~~t~~~~g~g---~p~~~~l~~v~~~~~---~~~iPVIa~GGI~~~~di~kal~--- 352 (490)
T 4avf_A 284 AKALAEAGADAVKVGIG--PGSICTTRIVAGVG---VPQISAIANVAAALE---GTGVPLIADGGIRFSGDLAKAMV--- 352 (490)
T ss_dssp HHHHHHTTCSEEEECSS--CSTTCHHHHHTCBC---CCHHHHHHHHHHHHT---TTTCCEEEESCCCSHHHHHHHHH---
T ss_pred HHHHHHcCCCEEEECCC--CCcCCCccccCCCC---ccHHHHHHHHHHHhc---cCCCcEEEeCCCCCHHHHHHHHH---
Confidence 46788999999 86322 2110 0 01 223444444332211 23577889999999999999999
Q ss_pred hhCCCCc
Q psy969 76 IMLGPDW 82 (106)
Q Consensus 76 ~~lGa~w 82 (106)
+|++.
T Consensus 353 --~GAd~ 357 (490)
T 4avf_A 353 --AGAYC 357 (490)
T ss_dssp --HTCSE
T ss_pred --cCCCe
Confidence 58763
No 48
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=94.39 E-value=0.12 Score=38.62 Aligned_cols=67 Identities=18% Similarity=0.073 Sum_probs=44.3
Q ss_pred hHHHhhCCCc-c-cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 5 RKVAFKGSNF-R-TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 5 ~iai~aGadF-K-TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
+.+.++|+|| - |..||.+...+ . ..+..++.+.. + .++-|=++|||+|.+++.++++ +|++
T Consensus 143 ~~a~~~Gad~Ig~~~~g~t~~~~~-~---~~~~~li~~l~----~---~~ipvIA~GGI~t~~d~~~~~~-----~Gad- 205 (229)
T 3q58_A 143 ISCHQKGIEFIGTTLSGYTGPITP-V---EPDLAMVTQLS----H---AGCRVIAEGRYNTPALAANAIE-----HGAW- 205 (229)
T ss_dssp HHHHHTTCSEEECTTTTSSSSCCC-S---SCCHHHHHHHH----T---TTCCEEEESSCCSHHHHHHHHH-----TTCS-
T ss_pred HHHHhCCCCEEEecCccCCCCCcC-C---CCCHHHHHHHH----H---cCCCEEEECCCCCHHHHHHHHH-----cCCC-
Confidence 5678899999 6 45676432211 0 22444444332 1 1577789999999999999999 7985
Q ss_pred cCCCceeEec
Q psy969 83 LNKDLFRIGA 92 (106)
Q Consensus 83 ~~~~~~RiGt 92 (106)
..-+|+
T Consensus 206 ----gV~VGs 211 (229)
T 3q58_A 206 ----AVTVGS 211 (229)
T ss_dssp ----EEEECH
T ss_pred ----EEEEch
Confidence 555664
No 49
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.27 E-value=0.15 Score=41.04 Aligned_cols=61 Identities=20% Similarity=0.225 Sum_probs=40.2
Q ss_pred hhHHHhhCCCc-ccCCCCCCC-------CCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPD-------STSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 75 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~-------gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~ 75 (106)
++.++++|||+ +.|.|-+.. +.. ...+..+.+..+ ... -|=+.|||++..++.+.+.
T Consensus 155 A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g-----~p~l~aI~~~~~----~~~---PVIAdGGI~~~~di~kALa--- 219 (361)
T 3r2g_A 155 ADYLASCGADIIKAGIGGGSVCSTRIKTGFG-----VPMLTCIQDCSR----ADR---SIVADGGIKTSGDIVKALA--- 219 (361)
T ss_dssp HHHHHHTTCSEEEECCSSSSCHHHHHHHCCC-----CCHHHHHHHHTT----SSS---EEEEESCCCSHHHHHHHHH---
T ss_pred HHHHHHcCCCEEEEcCCCCcCccccccCCcc-----HHHHHHHHHHHH----hCC---CEEEECCCCCHHHHHHHHH---
Confidence 56789999999 875441111 111 224444444321 111 6889999999999999999
Q ss_pred hhCCCC
Q psy969 76 IMLGPD 81 (106)
Q Consensus 76 ~~lGa~ 81 (106)
+|++
T Consensus 220 --~GAd 223 (361)
T 3r2g_A 220 --FGAD 223 (361)
T ss_dssp --TTCS
T ss_pred --cCCC
Confidence 7986
No 50
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=94.16 E-value=0.16 Score=42.32 Aligned_cols=68 Identities=16% Similarity=0.093 Sum_probs=42.3
Q ss_pred hhHHHhhCCCc-ccCCCCCC-CCCCCCCCCchHHHHHHHHHHHHhh-hcCCceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGP-DSTSYGNVCNTCGIIMCSAIKHFHK-LSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~-~gat~~~~~~~~v~lm~~~i~~~~~-~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
++.+.++|+|+ -.|..-+. .... +..+..+.+..+.+.+ ...+++-|=++||||+.+|+.+++. +|+
T Consensus 357 A~~a~~aGad~I~vs~hgG~~~d~~-----~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLa-----lGA 426 (511)
T 1kbi_A 357 VIKAAEIGVSGVVLSNHGGRQLDFS-----RAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALC-----LGA 426 (511)
T ss_dssp HHHHHHTTCSEEEECCTTTTSSTTC-----CCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHH-----HTC
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCC-----CchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHH-----cCC
Confidence 46788999999 55432111 1111 2334444333222210 1235788999999999999999999 698
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
+
T Consensus 427 d 427 (511)
T 1kbi_A 427 K 427 (511)
T ss_dssp S
T ss_pred C
Confidence 6
No 51
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=94.06 E-value=0.097 Score=43.27 Aligned_cols=67 Identities=21% Similarity=0.125 Sum_probs=40.6
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.++++|||+ +-+-|-+....+ .+.|-.+.+..+.+++++ ..+-|=++|||++.+|+.+.+.
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~------~~iPVIa~GGI~~~~di~kala----- 354 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE------YGIPVIADGGIRFSGDISKAIA----- 354 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGG------GTCCEEEESCCCSHHHHHHHHH-----
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhcc------CCCeEEEeCCCCCHHHHHHHHH-----
Confidence 46788999999 965442211110 011112333333333321 2366789999999999999999
Q ss_pred CCCC
Q psy969 78 LGPD 81 (106)
Q Consensus 78 lGa~ 81 (106)
+|++
T Consensus 355 ~GAd 358 (496)
T 4fxs_A 355 AGAS 358 (496)
T ss_dssp TTCS
T ss_pred cCCC
Confidence 6886
No 52
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.93 E-value=0.095 Score=42.86 Aligned_cols=68 Identities=19% Similarity=0.198 Sum_probs=43.0
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++.++++|+|+ +-+.|.+....| .+.|-...+..+.+..++ . .+-|=++|||++.+++.+++.
T Consensus 310 a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~----~--~ipVia~GGI~~~~di~kala----- 378 (514)
T 1jcn_A 310 AKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARR----F--GVPIIADGGIQTVGHVVKALA----- 378 (514)
T ss_dssp HHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGG----G--TCCEEEESCCCSHHHHHHHHH-----
T ss_pred HHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhh----C--CCCEEEECCCCCHHHHHHHHH-----
Confidence 46788999999 885532211111 111223345555444321 1 477889999999999999999
Q ss_pred CCCCc
Q psy969 78 LGPDW 82 (106)
Q Consensus 78 lGa~w 82 (106)
+|++.
T Consensus 379 ~GAd~ 383 (514)
T 1jcn_A 379 LGAST 383 (514)
T ss_dssp TTCSE
T ss_pred cCCCe
Confidence 68863
No 53
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=93.80 E-value=0.19 Score=38.97 Aligned_cols=26 Identities=23% Similarity=0.327 Sum_probs=23.5
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+++-|=++|||+|.+|+.+++. +|++
T Consensus 250 ~~ipvia~GGI~~~~d~~k~l~-----~GAd 275 (349)
T 1p0k_A 250 PASTMIASGGLQDALDVAKAIA-----LGAS 275 (349)
T ss_dssp TTSEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred CCCeEEEECCCCCHHHHHHHHH-----cCCC
Confidence 4688889999999999999999 7986
No 54
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=93.72 E-value=0.15 Score=42.30 Aligned_cols=67 Identities=24% Similarity=0.291 Sum_probs=41.8
Q ss_pred hhHHHhhCCCc-ccCCCCCCCC--CC-----CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDS--TS-----YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 75 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~g--at-----~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~ 75 (106)
++.++++|+|+ +- |.++.+ .+ .+.|-.+.+..+.+..++ -.+-|=++|||++.+|+.+.+.
T Consensus 311 a~~~~~aGad~i~v--g~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~------~~iPVIa~GGI~~~~di~kala--- 379 (511)
T 3usb_A 311 TKALIEAGANVVKV--GIGPGSICTTRVVAGVGVPQLTAVYDCATEARK------HGIPVIADGGIKYSGDMVKALA--- 379 (511)
T ss_dssp HHHHHHHTCSEEEE--CSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT------TTCCEEEESCCCSHHHHHHHHH---
T ss_pred HHHHHHhCCCEEEE--CCCCccccccccccCCCCCcHHHHHHHHHHHHh------CCCcEEEeCCCCCHHHHHHHHH---
Confidence 56789999999 85 333221 00 011113333333333322 2477889999999999999999
Q ss_pred hhCCCCcc
Q psy969 76 IMLGPDWL 83 (106)
Q Consensus 76 ~~lGa~w~ 83 (106)
+|++.+
T Consensus 380 --~GA~~V 385 (511)
T 3usb_A 380 --AGAHVV 385 (511)
T ss_dssp --TTCSEE
T ss_pred --hCchhh
Confidence 788743
No 55
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=93.54 E-value=0.19 Score=40.25 Aligned_cols=25 Identities=36% Similarity=0.377 Sum_probs=22.9
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++-|=++|||++..|+.+.+. +|++
T Consensus 267 ~ipvia~GGI~~~~d~~kal~-----lGA~ 291 (368)
T 3vkj_A 267 DSFLVGSGGIRSGLDAAKAIA-----LGAD 291 (368)
T ss_dssp TCEEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred CCcEEEECCCCCHHHHHHHHH-----cCCC
Confidence 588999999999999999999 6996
No 56
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=93.25 E-value=0.53 Score=36.58 Aligned_cols=79 Identities=14% Similarity=0.221 Sum_probs=53.7
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------CC----CCCCCCCCch-HHHHHHHHHHHHhhhcCCceeEeecC------CCC
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------PD----STSYGNVCNT-CGIIMCSAIKHFHKLSGKKIGLKPAG------GIS 62 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~~----gat~~~~~~~-~v~lm~~~i~~~~~~~~~~vgiKaaG------GIr 62 (106)
+++.+.++|.|. + -+.||- |. .-.||.. ++ ..+++.+.+++.++....+|+||.+. |.
T Consensus 149 aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGs-lenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~- 226 (338)
T 1z41_A 149 AAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGS-PENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGL- 226 (338)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSC-
T ss_pred HHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcc-hhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCC-
Confidence 467788999999 5 455541 21 1112221 33 57778888887777777899999987 44
Q ss_pred CHHHHHHHHHHHHhhCCCCccC
Q psy969 63 TFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 63 t~~~a~~~i~l~~~~lGa~w~~ 84 (106)
+.+++.++....++ +|.+|++
T Consensus 227 ~~~~~~~~a~~l~~-~Gvd~i~ 247 (338)
T 1z41_A 227 DIADHIGFAKWMKE-QGVDLID 247 (338)
T ss_dssp CHHHHHHHHHHHHH-TTCCEEE
T ss_pred CHHHHHHHHHHHHH-cCCCEEE
Confidence 67888888776654 7999874
No 57
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=93.10 E-value=0.21 Score=39.78 Aligned_cols=59 Identities=15% Similarity=0.118 Sum_probs=40.0
Q ss_pred hhHHHhhCCCc-ccCCCCCC----CCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 4 PRKVAFKGSNF-RTLHGRGP----DSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~----~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
++.+.++|+|+ +-|...++ ..++ .+.+..+++.+ +. -|=++|||++.+|+.+++. +
T Consensus 239 a~~a~~aGad~I~vs~~gg~~~d~~~~~-----~~~l~~v~~~~-------~~--pVia~GGI~~~~dv~kal~-----~ 299 (380)
T 1p4c_A 239 ADRCIAEGADGVILSNHGGRQLDCAISP-----MEVLAQSVAKT-------GK--PVLIDSGFRRGSDIVKALA-----L 299 (380)
T ss_dssp HHHHHHTTCSEEEECCGGGTSCTTCCCG-----GGTHHHHHHHH-------CS--CEEECSSCCSHHHHHHHHH-----T
T ss_pred HHHHHHcCCCEEEEcCCCCCcCCCCcCH-----HHHHHHHHHHc-------CC--eEEEECCCCCHHHHHHHHH-----h
Confidence 46788999999 76542121 1123 44454444432 22 5789999999999999998 7
Q ss_pred CCC
Q psy969 79 GPD 81 (106)
Q Consensus 79 Ga~ 81 (106)
|++
T Consensus 300 GAd 302 (380)
T 1p4c_A 300 GAE 302 (380)
T ss_dssp TCS
T ss_pred CCc
Confidence 986
No 58
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=92.65 E-value=0.35 Score=34.34 Aligned_cols=25 Identities=24% Similarity=0.311 Sum_probs=21.8
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=++|||++.+++.++++ +|++
T Consensus 198 ~~pvia~GGi~~~~~~~~~~~-----~Ga~ 222 (253)
T 1h5y_A 198 RIPVIASGGAGRVEHFYEAAA-----AGAD 222 (253)
T ss_dssp SSCEEEESCCCSHHHHHHHHH-----TTCS
T ss_pred CCCEEEeCCCCCHHHHHHHHH-----cCCc
Confidence 466788999999999999997 7885
No 59
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=92.37 E-value=0.19 Score=38.44 Aligned_cols=20 Identities=40% Similarity=0.632 Sum_probs=18.4
Q ss_pred ecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 57 PAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 57 aaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++|||+|.+++.++++ +|++
T Consensus 214 a~GGI~~~~d~~~~~~-----~Gad 233 (305)
T 2nv1_A 214 AAGGVATPADAALMMQ-----LGAD 233 (305)
T ss_dssp BCSCCCSHHHHHHHHH-----TTCS
T ss_pred eccCCCCHHHHHHHHH-----cCCC
Confidence 8899999999999998 7886
No 60
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=92.29 E-value=0.15 Score=40.06 Aligned_cols=22 Identities=18% Similarity=0.442 Sum_probs=19.8
Q ss_pred CceeEeecCCCCCHHHHHHHHH
Q psy969 51 KKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
+++-|-++|||+|.+++.++++
T Consensus 196 ~~iPVianGgI~s~eda~~~l~ 217 (350)
T 3b0p_A 196 PQLTFVTNGGIRSLEEALFHLK 217 (350)
T ss_dssp TTSEEEEESSCCSHHHHHHHHT
T ss_pred CCCeEEEECCcCCHHHHHHHHh
Confidence 3688999999999999999985
No 61
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=92.26 E-value=0.34 Score=38.94 Aligned_cols=27 Identities=26% Similarity=0.407 Sum_probs=24.5
Q ss_pred CCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 50 GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 50 ~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+++-|=++||||+..|+.+.+. +|++
T Consensus 276 ~~~ipvia~GGI~~g~Dv~KaLa-----lGAd 302 (365)
T 3sr7_A 276 MDKVEILASGGIRHPLDIIKALV-----LGAK 302 (365)
T ss_dssp TTTSEEEECSSCCSHHHHHHHHH-----HTCS
T ss_pred cCCCeEEEeCCCCCHHHHHHHHH-----cCCC
Confidence 45789999999999999999999 6996
No 62
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=91.54 E-value=0.83 Score=36.23 Aligned_cols=78 Identities=22% Similarity=0.120 Sum_probs=44.0
Q ss_pred hHHHhhCCCc-ccCCCC---CCCC----CCCCCCCchH-HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHH
Q psy969 5 RKVAFKGSNF-RTLHGR---GPDS----TSYGNVCNTC-GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVL 75 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~---~~~g----at~~~~~~~~-v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~ 75 (106)
+...++|+|+ --=-|+ +-.| .+ .++ .+++.+..+..++..++-+-+=-+|||.+.+|+...+++.
T Consensus 177 ~amA~agpDiI~~h~glT~gglIG~~~avs-----~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t- 250 (286)
T 2p10_A 177 VAMAKAGADILVCHMGLTTGGAIGARSGKS-----MDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSC- 250 (286)
T ss_dssp HHHHHHTCSEEEEECSCC---------CCC-----HHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHC-
T ss_pred HHHHHcCCCEEEECCCCCCCCcccCCCccc-----HHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcC-
Confidence 4567889998 322221 1111 23 333 4444444443333344444444556999999999999931
Q ss_pred hhCCCCccCCCceeEeccchH
Q psy969 76 IMLGPDWLNKDLFRIGASSLL 96 (106)
Q Consensus 76 ~~lGa~w~~~~~~RiGtSs~~ 96 (106)
-|++ --+|+|+..
T Consensus 251 --~G~~------G~~gASsie 263 (286)
T 2p10_A 251 --QGCH------GFYGASSME 263 (286)
T ss_dssp --TTCC------EEEESHHHH
T ss_pred --CCcc------EEEeehhhh
Confidence 1665 568888754
No 63
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=91.48 E-value=0.68 Score=36.64 Aligned_cols=81 Identities=15% Similarity=0.230 Sum_probs=51.4
Q ss_pred hhhHHHhhCCCc-c--cCCCC------CCC----CCCCCCCCchHHHHHHHHHHHHhhhcCC-ceeEeecCC--CC----
Q psy969 3 RPRKVAFKGSNF-R--TLHGR------GPD----STSYGNVCNTCGIIMCSAIKHFHKLSGK-KIGLKPAGG--IS---- 62 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~------~~~----gat~~~~~~~~v~lm~~~i~~~~~~~~~-~vgiKaaGG--Ir---- 62 (106)
+++.|.++|.|. . -+.|| .|. .-.||..=....+++.+.+++.++.+++ .|+||.+.+ ..
T Consensus 166 aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~ 245 (364)
T 1vyr_A 166 AVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDN 245 (364)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCC
T ss_pred HHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccC
Confidence 466788999999 5 34554 121 1112221133567777777777777764 899999976 32
Q ss_pred ---CHHHHHHHHHHHHhhCCCCccC
Q psy969 63 ---TFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 63 ---t~~~a~~~i~l~~~~lGa~w~~ 84 (106)
+.+++.++.+..++ +|++|++
T Consensus 246 ~~~~~~~~~~~a~~l~~-~G~d~i~ 269 (364)
T 1vyr_A 246 GPNEEADALYLIEELAK-RGIAYLH 269 (364)
T ss_dssp CTTHHHHHHHHHHHHHH-TTCSEEE
T ss_pred CCCCHHHHHHHHHHHHH-hCCCEEE
Confidence 56677777665543 6998863
No 64
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=91.26 E-value=0.81 Score=36.42 Aligned_cols=80 Identities=11% Similarity=0.087 Sum_probs=51.6
Q ss_pred hhhHHHhhCCCc-c--cCCCC------CCC----CCCCCCCCchHHHHHHHHHHHHhhhcCC-ceeEeecCC-----C--
Q psy969 3 RPRKVAFKGSNF-R--TLHGR------GPD----STSYGNVCNTCGIIMCSAIKHFHKLSGK-KIGLKPAGG-----I-- 61 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~------~~~----gat~~~~~~~~v~lm~~~i~~~~~~~~~-~vgiKaaGG-----I-- 61 (106)
+++.|.++|.|. + -+.|| .|. .-.||..=....+++++.+++.++.++. .|+||.+.. +
T Consensus 172 AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~ 251 (376)
T 1icp_A 172 AARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGD 251 (376)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCC
T ss_pred HHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 567888999999 5 44554 121 1112221133578888888888887874 899999853 2
Q ss_pred -CCHHHHHHHHHHHHhhCCCCcc
Q psy969 62 -STFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 62 -rt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.+++.++.+..++ +|.+|+
T Consensus 252 ~~~~~~~~~la~~le~-~Gvd~i 273 (376)
T 1icp_A 252 TNPTALGLYMVESLNK-YDLAYC 273 (376)
T ss_dssp SCHHHHHHHHHHHHGG-GCCSEE
T ss_pred CCCHHHHHHHHHHHHH-cCCCEE
Confidence 245677777766544 589886
No 65
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=91.03 E-value=0.44 Score=36.59 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=41.4
Q ss_pred hHHHhhCCCc-ccCCCCC--CCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRG--PDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~--~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.+.|+|+ .+. +.. ..... ++..+-+. +..+..+-+=+.|||+|.+++.++.+ +|++
T Consensus 176 ~~A~~~Gad~IGv~-~r~l~~~~~d-----l~~~~~l~-------~~v~~~~pvVaegGI~t~edv~~l~~-----~Gad 237 (272)
T 3qja_A 176 DRALKAGAKVIGVN-ARDLMTLDVD-----RDCFARIA-------PGLPSSVIRIAESGVRGTADLLAYAG-----AGAD 237 (272)
T ss_dssp HHHHHHTCSEEEEE-SBCTTTCCBC-----TTHHHHHG-------GGSCTTSEEEEESCCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHCCCCEEEEC-CCcccccccC-----HHHHHHHH-------HhCcccCEEEEECCCCCHHHHHHHHH-----cCCC
Confidence 4567889999 543 221 11222 34333332 22444566778999999999999999 7884
Q ss_pred ccCCCceeEecc
Q psy969 82 WLNKDLFRIGAS 93 (106)
Q Consensus 82 w~~~~~~RiGtS 93 (106)
.+-+|++
T Consensus 238 -----gvlVGsa 244 (272)
T 3qja_A 238 -----AVLVGEG 244 (272)
T ss_dssp -----EEEECHH
T ss_pred -----EEEEcHH
Confidence 5556653
No 66
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=91.01 E-value=0.57 Score=35.38 Aligned_cols=59 Identities=17% Similarity=0.101 Sum_probs=36.4
Q ss_pred hhHHHhhCCCc-ccCCCCCCCC---CCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDS---TSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~g---at~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
.+.+.+.|+|| -...|....+ .+ ++.++.+++. . ++-|=+.|||+|.+++.++++ +|
T Consensus 140 a~~~~~~gad~v~~~~~~~Gt~~~~~~-----~~~l~~i~~~-------~--~iPviv~gGI~t~eda~~~~~-----~G 200 (264)
T 1xm3_A 140 ARKLEELGVHAIMPGASPIGSGQGILN-----PLNLSFIIEQ-------A--KVPVIVDAGIGSPKDAAYAME-----LG 200 (264)
T ss_dssp HHHHHHHTCSCBEECSSSTTCCCCCSC-----HHHHHHHHHH-------C--SSCBEEESCCCSHHHHHHHHH-----TT
T ss_pred HHHHHHhCCCEEEECCcccCCCCCCCC-----HHHHHHHHhc-------C--CCCEEEEeCCCCHHHHHHHHH-----cC
Confidence 45677889999 5433321111 12 4444444332 2 344445689999999999999 79
Q ss_pred CC
Q psy969 80 PD 81 (106)
Q Consensus 80 a~ 81 (106)
++
T Consensus 201 Ad 202 (264)
T 1xm3_A 201 AD 202 (264)
T ss_dssp CS
T ss_pred CC
Confidence 86
No 67
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=90.77 E-value=0.14 Score=40.92 Aligned_cols=27 Identities=22% Similarity=0.196 Sum_probs=24.0
Q ss_pred CCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 50 GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 50 ~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+++-|-+.|||+|.+||.+++. +|++
T Consensus 275 ~~~ipII~~GGI~s~~da~~~l~-----aGAd 301 (354)
T 4ef8_A 275 CPGKLIFGCGGVYTGEDAFLHVL-----AGAS 301 (354)
T ss_dssp CTTSEEEEESCCCSHHHHHHHHH-----HTEE
T ss_pred CCCCCEEEECCcCCHHHHHHHHH-----cCCC
Confidence 35789999999999999999998 5885
No 68
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=90.63 E-value=0.4 Score=42.44 Aligned_cols=35 Identities=17% Similarity=0.367 Sum_probs=27.1
Q ss_pred HHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 41 AIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 41 ~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.++++++.. +++-|=++|||+|.+||.+++. +|++
T Consensus 777 ~v~~v~~~~-~~ipvi~~GGI~s~~da~~~l~-----~Ga~ 811 (1025)
T 1gte_A 777 AVTTIARAL-PGFPILATGGIDSAESGLQFLH-----SGAS 811 (1025)
T ss_dssp HHHHHHHHS-TTCCEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHHHc-CCCCEEEecCcCCHHHHHHHHH-----cCCC
Confidence 333444444 4588999999999999999999 7985
No 69
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=90.50 E-value=1.3 Score=34.56 Aligned_cols=79 Identities=18% Similarity=0.235 Sum_probs=52.9
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------CC----CCCCCCCCch-HHHHHHHHHHHHhhhcCC--ceeEeecC------C
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------PD----STSYGNVCNT-CGIIMCSAIKHFHKLSGK--KIGLKPAG------G 60 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~~----gat~~~~~~~-~v~lm~~~i~~~~~~~~~--~vgiKaaG------G 60 (106)
+++.|.++|.|. . -+.||- |. .-.||.. ++ ..+++++.+++.++.+++ .|+||.+. |
T Consensus 157 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 157 GARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGS-LENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcC-HHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 567888999998 3 455542 21 1112221 44 578888888888888864 49999995 4
Q ss_pred CCCHHHHHHHHHHHHhhCCCCccC
Q psy969 61 ISTFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 61 Irt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
-+.+++.++.+..++ +|.+|++
T Consensus 236 -~~~~~~~~la~~L~~-~Gvd~i~ 257 (349)
T 3hgj_A 236 -WSLEDTLAFARRLKE-LGVDLLD 257 (349)
T ss_dssp -CCHHHHHHHHHHHHH-TTCCEEE
T ss_pred -CCHHHHHHHHHHHHH-cCCCEEE
Confidence 467888877776544 6999874
No 70
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=90.20 E-value=1.1 Score=36.42 Aligned_cols=79 Identities=11% Similarity=0.151 Sum_probs=53.0
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------C----CCCCCCCCCc-h-HHHHHHHHHHHHhhhc----CC--ceeEeecC--
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------P----DSTSYGNVCN-T-CGIIMCSAIKHFHKLS----GK--KIGLKPAG-- 59 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~----~gat~~~~~~-~-~v~lm~~~i~~~~~~~----~~--~vgiKaaG-- 59 (106)
|++.|.++|.|. - -..||- | ..-.||.. + + ..+++++.+++.++.+ ++ .|+||.+.
T Consensus 175 AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs-~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~ 253 (419)
T 3l5a_A 175 ATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGAD-SLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEE 253 (419)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTT-CHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCE
T ss_pred HHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCc-hhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEeccccc
Confidence 577899999998 3 344431 2 11112211 4 4 4677777777776666 22 69999987
Q ss_pred ------CCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 60 ------GISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 60 ------GIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
|+ +.++..++++..++.+|.+++
T Consensus 254 ~~~~~~G~-~~ed~~~la~~L~~~~Gvd~I 282 (419)
T 3l5a_A 254 TRGSDLGY-TIDEFNQLIDWVMDVSNIQYL 282 (419)
T ss_dssp EETTEEEE-CHHHHHHHHHHHHHHSCCCCE
T ss_pred ccCCCCCC-CHHHHHHHHHHHHhhcCCcEE
Confidence 55 589999999988876899986
No 71
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=90.16 E-value=1.1 Score=33.62 Aligned_cols=20 Identities=45% Similarity=0.594 Sum_probs=18.7
Q ss_pred ecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 57 PAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 57 aaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++|||+|.+++.++++ +|++
T Consensus 214 a~GGI~~~e~i~~~~~-----aGad 233 (297)
T 2zbt_A 214 AAGGIATPADAALMMH-----LGMD 233 (297)
T ss_dssp BCSSCCSHHHHHHHHH-----TTCS
T ss_pred eeCCCCCHHHHHHHHH-----cCCC
Confidence 8999999999999999 7986
No 72
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=90.01 E-value=0.41 Score=37.74 Aligned_cols=60 Identities=18% Similarity=0.097 Sum_probs=44.0
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.|+++|+|+ .=-+ -+ +++++...+.+ ++++.|=+|||| |++.+.+|.+ .|+|
T Consensus 212 ~eAl~aGaD~I~LDn------~~-----~~~l~~av~~~-------~~~v~ieaSGGI-t~~~i~~~a~-----tGVD-- 265 (287)
T 3tqv_A 212 NQAIAAKADIVMLDN------FS-----GEDIDIAVSIA-------RGKVALEVSGNI-DRNSIVAIAK-----TGVD-- 265 (287)
T ss_dssp HHHHHTTCSEEEEES------CC-----HHHHHHHHHHH-------TTTCEEEEESSC-CTTTHHHHHT-----TTCS--
T ss_pred HHHHHcCCCEEEEcC------CC-----HHHHHHHHHhh-------cCCceEEEECCC-CHHHHHHHHH-----cCCC--
Confidence 4678899999 5322 34 66655554443 478999999999 7888999998 7997
Q ss_pred CCCceeEeccch
Q psy969 84 NKDLFRIGASSL 95 (106)
Q Consensus 84 ~~~~~RiGtSs~ 95 (106)
.|+.+++
T Consensus 266 -----~IsvGal 272 (287)
T 3tqv_A 266 -----FISVGAI 272 (287)
T ss_dssp -----EEECSHH
T ss_pred -----EEEEChh
Confidence 7777654
No 73
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=89.94 E-value=0.65 Score=35.97 Aligned_cols=67 Identities=19% Similarity=0.100 Sum_probs=44.5
Q ss_pred hHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 5 RKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 5 ~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
+.|.+.|+|+ -|......-... ++...-+.+. .+..+-+=+-|||+|.+|+.++.+ +|++
T Consensus 183 ~~A~~~ga~iIGinnr~l~t~~~d-----l~~~~~L~~~-------ip~~~~vIaesGI~t~edv~~l~~-----~Ga~- 244 (272)
T 3tsm_A 183 ERALKLSSRLLGVNNRNLRSFEVN-----LAVSERLAKM-------APSDRLLVGESGIFTHEDCLRLEK-----SGIG- 244 (272)
T ss_dssp HHHTTSCCSEEEEECBCTTTCCBC-----THHHHHHHHH-------SCTTSEEEEESSCCSHHHHHHHHT-----TTCC-
T ss_pred HHHHhcCCCEEEECCCCCccCCCC-----hHHHHHHHHh-------CCCCCcEEEECCCCCHHHHHHHHH-----cCCC-
Confidence 4567889999 554443332334 4444444443 345566667789999999999999 7884
Q ss_pred cCCCceeEecc
Q psy969 83 LNKDLFRIGAS 93 (106)
Q Consensus 83 ~~~~~~RiGtS 93 (106)
.+-+|++
T Consensus 245 ----gvLVG~a 251 (272)
T 3tsm_A 245 ----TFLIGES 251 (272)
T ss_dssp ----EEEECHH
T ss_pred ----EEEEcHH
Confidence 6777764
No 74
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=89.93 E-value=1.2 Score=34.94 Aligned_cols=80 Identities=16% Similarity=0.176 Sum_probs=52.4
Q ss_pred hhhHHHhhCCCc-c--cCCCC------CCC----CCCCCCCCch-HHHHHHHHHHHHhhhcCCceeEeecCC-----CCC
Q psy969 3 RPRKVAFKGSNF-R--TLHGR------GPD----STSYGNVCNT-CGIIMCSAIKHFHKLSGKKIGLKPAGG-----IST 63 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~------~~~----gat~~~~~~~-~v~lm~~~i~~~~~~~~~~vgiKaaGG-----Irt 63 (106)
+++.|.++|.|. . -+.|| .|. .-.||. +++ ..+++++.+++.++.+...|+||.+.. =-+
T Consensus 149 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~ 227 (340)
T 3gr7_A 149 GARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGG-SPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLT 227 (340)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC
T ss_pred HHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccC-CHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCC
Confidence 567888999998 3 44443 121 111222 155 578888888888887877899999953 135
Q ss_pred HHHHHHHHHHHHhhCCCCccC
Q psy969 64 FEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 64 ~~~a~~~i~l~~~~lGa~w~~ 84 (106)
.++..++.+..++ +|.+|++
T Consensus 228 ~~~~~~la~~L~~-~Gvd~i~ 247 (340)
T 3gr7_A 228 AKDYVPYAKRMKE-QGVDLVD 247 (340)
T ss_dssp GGGHHHHHHHHHH-TTCCEEE
T ss_pred HHHHHHHHHHHHH-cCCCEEE
Confidence 6777777665544 6998864
No 75
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=89.88 E-value=0.56 Score=33.62 Aligned_cols=60 Identities=12% Similarity=0.046 Sum_probs=37.3
Q ss_pred hHHHhhCCCc-ccCCCCCC---CCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGP---DSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~---~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
+.+.+.|+|| -.++.|.. .+.. +.....+.+.. +.. ++-|=++||| +.+++.++++ +|+
T Consensus 124 ~~a~~~gaD~i~~~~~f~~~~~~g~~-----~~~~~~l~~~~----~~~--~~pvia~GGI-~~~nv~~~~~-----~Ga 186 (221)
T 1yad_A 124 VQAEKEDADYVLFGHVFETDCKKGLE-----GRGVSLLSDIK----QRI--SIPVIAIGGM-TPDRLRDVKQ-----AGA 186 (221)
T ss_dssp HHHHHTTCSEEEEECCC---------------CHHHHHHHHH----HHC--CSCEEEESSC-CGGGHHHHHH-----TTC
T ss_pred HHHHhCCCCEEEECCccccCCCCCCC-----CCCHHHHHHHH----HhC--CCCEEEECCC-CHHHHHHHHH-----cCC
Confidence 4567889999 77665532 1112 33444443322 112 4668889999 9999999999 798
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
+
T Consensus 187 ~ 187 (221)
T 1yad_A 187 D 187 (221)
T ss_dssp S
T ss_pred C
Confidence 6
No 76
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=89.85 E-value=0.6 Score=36.64 Aligned_cols=64 Identities=13% Similarity=0.106 Sum_probs=37.3
Q ss_pred hhHHHhhCCCc-ccCCCC-CCCCCCCCCCC-chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC-
Q psy969 4 PRKVAFKGSNF-RTLHGR-GPDSTSYGNVC-NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG- 79 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~-~~~gat~~~~~-~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG- 79 (106)
++...++|+|| --+.|. .+.....+... .+.++.+++. + ++-|=+.|||+|.++|.++++ .|
T Consensus 235 a~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~-------~--~iPVi~~GgI~s~e~a~~~L~-----~G~ 300 (340)
T 3gr7_A 235 AKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRRE-------A--DIPTGAVGLITSGWQAEEILQ-----NGR 300 (340)
T ss_dssp HHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHH-------T--TCCEEEESSCCCHHHHHHHHH-----TTS
T ss_pred HHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHH-------c--CCcEEeeCCCCCHHHHHHHHH-----CCC
Confidence 45667889999 666553 22100000000 2223333332 2 355678899999999999999 57
Q ss_pred CC
Q psy969 80 PD 81 (106)
Q Consensus 80 a~ 81 (106)
+|
T Consensus 301 aD 302 (340)
T 3gr7_A 301 AD 302 (340)
T ss_dssp CS
T ss_pred ee
Confidence 64
No 77
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=89.71 E-value=0.67 Score=33.84 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.0
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=+.|||+|.+++.++++ .|++
T Consensus 79 ~ipvi~~Ggi~~~~~~~~~l~-----~Gad 103 (247)
T 3tdn_A 79 TLPIIASGGAGKMEHFLEAFL-----RGAD 103 (247)
T ss_dssp CSCEEEESCCCSHHHHHHHHH-----TTCS
T ss_pred CCCEEEeCCCCCHHHHHHHHH-----cCCC
Confidence 355667899999999999998 6886
No 78
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=89.52 E-value=0.49 Score=37.61 Aligned_cols=60 Identities=12% Similarity=0.038 Sum_probs=42.9
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.|+++|+|. .== +-+ +++++...+.+ ++++.|=+|||| |++.+.+|.+ .|+|
T Consensus 221 ~eAl~aGaDiImLD------n~s-----~~~l~~av~~~-------~~~v~leaSGGI-t~~~i~~~A~-----tGVD-- 274 (300)
T 3l0g_A 221 EESLSNNVDMILLD------NMS-----ISEIKKAVDIV-------NGKSVLEVSGCV-NIRNVRNIAL-----TGVD-- 274 (300)
T ss_dssp HHHHHTTCSEEEEE------SCC-----HHHHHHHHHHH-------TTSSEEEEESSC-CTTTHHHHHT-----TTCS--
T ss_pred HHHHHcCCCEEEEC------CCC-----HHHHHHHHHhh-------cCceEEEEECCC-CHHHHHHHHH-----cCCC--
Confidence 4678889998 532 234 65555444433 468999999999 7889999998 7997
Q ss_pred CCCceeEeccch
Q psy969 84 NKDLFRIGASSL 95 (106)
Q Consensus 84 ~~~~~RiGtSs~ 95 (106)
.|+++++
T Consensus 275 -----~IsvGal 281 (300)
T 3l0g_A 275 -----YISIGCI 281 (300)
T ss_dssp -----EEECGGG
T ss_pred -----EEEeCcc
Confidence 7766553
No 79
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=88.74 E-value=1.8 Score=34.43 Aligned_cols=81 Identities=9% Similarity=0.096 Sum_probs=51.7
Q ss_pred hhhHHHhhCCCc-cc--CCCCC------CC----CCCCCCCCchHHHHHHHHHHHHhhhcCC-ceeEeecCCC-------
Q psy969 3 RPRKVAFKGSNF-RT--LHGRG------PD----STSYGNVCNTCGIIMCSAIKHFHKLSGK-KIGLKPAGGI------- 61 (106)
Q Consensus 3 ~~~iai~aGadF-KT--STG~~------~~----gat~~~~~~~~v~lm~~~i~~~~~~~~~-~vgiKaaGGI------- 61 (106)
+++.|.++|.|. .- +.||- |. .-.||..-....+++++.+++.++.++. .|+||.+..-
T Consensus 171 aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~ 250 (377)
T 2r14_A 171 AAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTD 250 (377)
T ss_dssp HHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCC
T ss_pred HHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCC
Confidence 467788999998 53 44431 11 1122221133577888888877777764 8999987531
Q ss_pred -CCHHHHHHHHHHHHhhCCCCccC
Q psy969 62 -STFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 62 -rt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
-+.+++.++.+..++ +|++|++
T Consensus 251 ~~~~~~~~~la~~le~-~Gvd~i~ 273 (377)
T 2r14_A 251 DEPEAMAFYLAGELDR-RGLAYLH 273 (377)
T ss_dssp SCHHHHHHHHHHHHHH-TTCSEEE
T ss_pred CCCHHHHHHHHHHHHH-cCCCEEE
Confidence 246777777766554 6998863
No 80
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=88.65 E-value=1.1 Score=32.33 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=37.3
Q ss_pred hhHHHhhCCCc--ccCCCCCC--CCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 4 PRKVAFKGSNF--RTLHGRGP--DSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~--~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
.+.+.+.|++. -|+++... .+.. .+.++.+++. . ++-|=++|||++.+++.++++ .|
T Consensus 158 ~~~~~~~G~~~i~~~~~~~~g~~~g~~-----~~~i~~l~~~-------~--~ipvia~GGI~~~~d~~~~~~-----~G 218 (252)
T 1ka9_F 158 AVKGVELGAGEILLTSMDRDGTKEGYD-----LRLTRMVAEA-------V--GVPVIASGGAGRMEHFLEAFQ-----AG 218 (252)
T ss_dssp HHHHHHHTCCEEEEEETTTTTTCSCCC-----HHHHHHHHHH-------C--SSCEEEESCCCSHHHHHHHHH-----TT
T ss_pred HHHHHHcCCCEEEEecccCCCCcCCCC-----HHHHHHHHHH-------c--CCCEEEeCCCCCHHHHHHHHH-----CC
Confidence 35566789994 67654321 1122 3333333322 2 466778999999999999997 68
Q ss_pred CC
Q psy969 80 PD 81 (106)
Q Consensus 80 a~ 81 (106)
++
T Consensus 219 ad 220 (252)
T 1ka9_F 219 AE 220 (252)
T ss_dssp CS
T ss_pred CH
Confidence 75
No 81
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=88.59 E-value=0.3 Score=35.42 Aligned_cols=54 Identities=15% Similarity=0.105 Sum_probs=33.1
Q ss_pred hHHHhhCCCc--ccCCC--CCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 5 RKVAFKGSNF--RTLHG--RGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 5 ~iai~aGadF--KTSTG--~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
+.+.+.|+|. -|+.- +...+.. .+.++.+++. -.+-|=++|||++.+++.++++
T Consensus 153 ~~~~~~G~~~i~~~~~~~~~~~~g~~-----~~~~~~i~~~---------~~ipvia~GGI~~~~d~~~~~~ 210 (244)
T 1vzw_A 153 DRLNKEGCARYVVTDIAKDGTLQGPN-----LELLKNVCAA---------TDRPVVASGGVSSLDDLRAIAG 210 (244)
T ss_dssp HHHHHTTCCCEEEEEC-------CCC-----HHHHHHHHHT---------CSSCEEEESCCCSHHHHHHHHT
T ss_pred HHHHhCCCCEEEEeccCcccccCCCC-----HHHHHHHHHh---------cCCCEEEECCCCCHHHHHHHHh
Confidence 4566789996 55532 1112223 3333333321 2467889999999999999998
No 82
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=88.15 E-value=1.1 Score=34.80 Aligned_cols=63 Identities=11% Similarity=0.108 Sum_probs=43.7
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.++++|+|+ -=-+ -+ +++++...+.++.. .+++.|=+|||| |++...+|.+ .|+|
T Consensus 208 ~eal~aGaD~I~LDn------~~-----~~~~~~~v~~l~~~----~~~v~ieaSGGI-t~~~i~~~a~-----tGVD-- 264 (284)
T 1qpo_A 208 DAVLPEKPELILLDN------FA-----VWQTQTAVQRRDSR----APTVMLESSGGL-SLQTAATYAE-----TGVD-- 264 (284)
T ss_dssp HHHGGGCCSEEEEET------CC-----HHHHHHHHHHHHHH----CTTCEEEEESSC-CTTTHHHHHH-----TTCS--
T ss_pred HHHHHcCCCEEEECC------CC-----HHHHHHHHHHhhcc----CCCeEEEEECCC-CHHHHHHHHh-----cCCC--
Confidence 4567789998 4322 34 66665555544321 357899999999 6899999999 7996
Q ss_pred CCCceeEeccch
Q psy969 84 NKDLFRIGASSL 95 (106)
Q Consensus 84 ~~~~~RiGtSs~ 95 (106)
.|+++++
T Consensus 265 -----~isvG~l 271 (284)
T 1qpo_A 265 -----YLAVGAL 271 (284)
T ss_dssp -----EEECGGG
T ss_pred -----EEEECHH
Confidence 7776664
No 83
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=88.11 E-value=1.2 Score=34.66 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=43.3
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.|.++|||| --.+ -+ ++.++...+.+ ++++.+=+||||. ++.+.+|.+ .|++
T Consensus 210 ~eA~~aGaD~I~ld~------~~-----~~~~k~av~~v-------~~~ipi~AsGGIt-~eni~~~a~-----tGvD-- 263 (286)
T 1x1o_A 210 EEALEAGADLILLDN------FP-----LEALREAVRRV-------GGRVPLEASGNMT-LERAKAAAE-----AGVD-- 263 (286)
T ss_dssp HHHHHHTCSEEEEES------CC-----HHHHHHHHHHH-------TTSSCEEEESSCC-HHHHHHHHH-----HTCS--
T ss_pred HHHHHcCCCEEEECC------CC-----HHHHHHHHHHh-------CCCCeEEEEcCCC-HHHHHHHHH-----cCCC--
Confidence 4677899999 5443 23 55655444332 3578899999995 999999999 6996
Q ss_pred CCCceeEeccchH
Q psy969 84 NKDLFRIGASSLL 96 (106)
Q Consensus 84 ~~~~~RiGtSs~~ 96 (106)
.|+.+++.
T Consensus 264 -----~IsVgs~~ 271 (286)
T 1x1o_A 264 -----YVSVGALT 271 (286)
T ss_dssp -----EEECTHHH
T ss_pred -----EEEEcHHH
Confidence 77776643
No 84
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=87.61 E-value=0.36 Score=37.66 Aligned_cols=37 Identities=22% Similarity=0.230 Sum_probs=26.8
Q ss_pred HHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 39 CSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 39 ~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.+++.++..+ .+-|=..|||+|.+||.++|. +||+
T Consensus 265 ~~~v~~~~~~~~-~~pIIg~GGI~s~~Da~e~i~-----aGAs 301 (354)
T 3tjx_A 265 LANINAFYRRCP-GKLIFGCGGVYTGEDAFLHVL-----AGAS 301 (354)
T ss_dssp HHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHH-----HTEE
T ss_pred HHHHHHHHHhcC-CCcEEEeCCcCCHHHHHHHHH-----cCCC
Confidence 344444444443 445668899999999999998 6986
No 85
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=87.08 E-value=3.2 Score=32.42 Aligned_cols=31 Identities=32% Similarity=0.354 Sum_probs=23.6
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEec
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGA 92 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGt 92 (106)
++-+=+.|||+|.+++.++++ +|++ .+-+|+
T Consensus 209 PVivvA~GGI~t~~dv~~~~~-----~GAd-----gVlVGs 239 (297)
T 4adt_A 209 PVVNFAAGGIATPADAAMCMQ-----LGMD-----GVFVGS 239 (297)
T ss_dssp SSEEEEESCCCSHHHHHHHHH-----TTCS-----CEEESH
T ss_pred CeEEEecCCCCCHHHHHHHHH-----cCCC-----EEEEhH
Confidence 343338999999999999999 7985 455564
No 86
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=87.00 E-value=1 Score=42.60 Aligned_cols=71 Identities=18% Similarity=0.131 Sum_probs=42.1
Q ss_pred hHHHhhCCCcccCCCCCC-CCCCC-------CCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHh
Q psy969 5 RKVAFKGSNFRTLHGRGP-DSTSY-------GNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLI 76 (106)
Q Consensus 5 ~iai~aGadFKTSTG~~~-~gat~-------~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~ 76 (106)
+.+.++|||+-+-.|... .+++. +-|-...+..+.+++++. ....+|-|=++|||+|..|+.+.+.
T Consensus 1011 ~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~--glr~~VpVIAdGGIrtG~DVakALa---- 1084 (1479)
T 1ea0_A 1011 AGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLN--RLRHRVRLRTDGGLKTGRDIVIAAM---- 1084 (1479)
T ss_dssp HHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTT--TCTTTSEEEEESSCCSHHHHHHHHH----
T ss_pred HHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHc--CCCCCceEEEECCCCCHHHHHHHHH----
Confidence 457789999933445432 12220 111122233333322110 1235799999999999999999999
Q ss_pred hCCCCc
Q psy969 77 MLGPDW 82 (106)
Q Consensus 77 ~lGa~w 82 (106)
|||++
T Consensus 1085 -LGAda 1089 (1479)
T 1ea0_A 1085 -LGAEE 1089 (1479)
T ss_dssp -TTCSE
T ss_pred -cCCCe
Confidence 79973
No 87
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=86.87 E-value=1.2 Score=34.52 Aligned_cols=63 Identities=10% Similarity=0.010 Sum_probs=36.9
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCC-CCC-C-chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSY-GNV-C-NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~-~~~-~-~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
++...++|+|| --+.|... .... ..+ . .+.++.+++. + ++-|=+.|||+|.++|.++++ .|
T Consensus 235 a~~l~~~Gvd~i~v~~~~~~-~~~~~~~~~~~~~~~~~ir~~-------~--~iPVi~~Ggi~s~~~a~~~l~-----~G 299 (338)
T 1z41_A 235 AKWMKEQGVDLIDCSSGALV-HADINVFPGYQVSFAEKIREQ-------A--DMATGAVGMITDGSMAEEILQ-----NG 299 (338)
T ss_dssp HHHHHHTTCCEEEEECCCSS-CCCCCCCTTTTHHHHHHHHHH-------H--CCEEEECSSCCSHHHHHHHHH-----TT
T ss_pred HHHHHHcCCCEEEEecCccc-cCCCCCCccchHHHHHHHHHH-------C--CCCEEEECCCCCHHHHHHHHH-----cC
Confidence 45567889999 65555211 1100 000 0 2223333332 2 355668999999999999999 67
Q ss_pred -CC
Q psy969 80 -PD 81 (106)
Q Consensus 80 -a~ 81 (106)
+|
T Consensus 300 ~aD 302 (338)
T 1z41_A 300 RAD 302 (338)
T ss_dssp SCS
T ss_pred Cce
Confidence 65
No 88
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=86.54 E-value=2.6 Score=35.07 Aligned_cols=79 Identities=15% Similarity=0.138 Sum_probs=52.7
Q ss_pred hhhHHHhhCCCc-cc--CCCC------CCC----CCCCCCCCch-HHHHHHHHHHHHhhhcCC--ceeEeecC------C
Q psy969 3 RPRKVAFKGSNF-RT--LHGR------GPD----STSYGNVCNT-CGIIMCSAIKHFHKLSGK--KIGLKPAG------G 60 (106)
Q Consensus 3 ~~~iai~aGadF-KT--STG~------~~~----gat~~~~~~~-~v~lm~~~i~~~~~~~~~--~vgiKaaG------G 60 (106)
+++.+.++|.|. +- +.|| .|. .-.||.. ++ ..+++.+.+++.++..++ .++||.+. |
T Consensus 146 aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs-~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g 224 (671)
T 1ps9_A 146 CAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGD-YRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDG 224 (671)
T ss_dssp HHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTC
T ss_pred HHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCc-HHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCC
Confidence 467788999999 54 4555 121 1112221 44 578888888888887854 57889983 4
Q ss_pred CCCHHHHHHHHHHHHhhCCCCccC
Q psy969 61 ISTFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 61 Irt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
-+.+++.++.+..++ +|.+|++
T Consensus 225 -~~~~~~~~~a~~l~~-~g~d~i~ 246 (671)
T 1ps9_A 225 -GTFAETVELAQAIEA-AGATIIN 246 (671)
T ss_dssp -CCHHHHHHHHHHHHH-HTCSEEE
T ss_pred -CCHHHHHHHHHHHHh-cCCCEEE
Confidence 378888888776554 6899874
No 89
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=86.46 E-value=2.3 Score=32.85 Aligned_cols=62 Identities=21% Similarity=0.232 Sum_probs=38.8
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.++|+|+ .-. |....|.+ +. .....++.+..+. . ++-|=++|||+|.+++.+++. +|++
T Consensus 138 ~~a~~~GaD~i~v~-g~~~GG~~-G~--~~~~~ll~~i~~~----~--~iPviaaGGI~~~~dv~~al~-----~GA~ 200 (326)
T 3bo9_A 138 RMVERAGADAVIAE-GMESGGHI-GE--VTTFVLVNKVSRS----V--NIPVIAAGGIADGRGMAAAFA-----LGAE 200 (326)
T ss_dssp HHHHHTTCSCEEEE-CTTSSEEC-CS--SCHHHHHHHHHHH----C--SSCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHcCCCEEEEE-CCCCCccC-CC--ccHHHHHHHHHHH----c--CCCEEEECCCCCHHHHHHHHH-----hCCC
Confidence 4677889999 432 22222211 10 3355555544321 2 466789999999999999999 5886
No 90
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=86.33 E-value=0.98 Score=35.59 Aligned_cols=80 Identities=15% Similarity=0.156 Sum_probs=52.3
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------C----CCCCCCCCCch-HHHHHHHHHHHHhhhcCC--ceeEeecC------C
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------P----DSTSYGNVCNT-CGIIMCSAIKHFHKLSGK--KIGLKPAG------G 60 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~----~gat~~~~~~~-~v~lm~~~i~~~~~~~~~--~vgiKaaG------G 60 (106)
+++.|.++|.|. . -..||- | ..-.||.. ++ ..+++++.+++.++.+++ .|+||.+. |
T Consensus 163 aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGs-lenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 163 AARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGS-FDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcC-HHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 567889999998 3 344432 1 11112221 44 478888888888888864 49999985 2
Q ss_pred CCCHHHHHHHHHHHHhhCCCCccC
Q psy969 61 ISTFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 61 Irt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
--+.+++.++++..++ +|.+|++
T Consensus 242 ~~~~~~~~~la~~L~~-~Gvd~i~ 264 (363)
T 3l5l_A 242 EQTLEESIELARRFKA-GGLDLLS 264 (363)
T ss_dssp HHHHHHHHHHHHHHHH-TTCCEEE
T ss_pred CCCHHHHHHHHHHHHH-cCCCEEE
Confidence 1456777777766544 6898864
No 91
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=86.32 E-value=1.3 Score=34.97 Aligned_cols=20 Identities=15% Similarity=0.042 Sum_probs=17.8
Q ss_pred eeEeecCCCCCHHHHHHHHH
Q psy969 53 IGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~ 72 (106)
+-|=+.|||+|.++|.++++
T Consensus 296 iPVi~~GgI~s~e~a~~~l~ 315 (363)
T 3l5l_A 296 LPVTSAWGFGTPQLAEAALQ 315 (363)
T ss_dssp CCEEECSSTTSHHHHHHHHH
T ss_pred CcEEEeCCCCCHHHHHHHHH
Confidence 45668899999999999999
No 92
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=86.28 E-value=1.5 Score=34.25 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=18.0
Q ss_pred eeEeecCCCCCHHHHHHHHH
Q psy969 53 IGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~ 72 (106)
+-|=+.|||+|.++|.++++
T Consensus 289 iPVi~~Ggi~t~e~a~~~l~ 308 (349)
T 3hgj_A 289 LRTGAVGLITTPEQAETLLQ 308 (349)
T ss_dssp CEEEECSSCCCHHHHHHHHH
T ss_pred ceEEEECCCCCHHHHHHHHH
Confidence 55678899999999999999
No 93
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=86.11 E-value=2.1 Score=34.12 Aligned_cols=80 Identities=9% Similarity=0.013 Sum_probs=50.9
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------CC----CCCCCCCCch-HHHHHHHHHHHHhhhcCC-ceeEeecC-----CCC
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------PD----STSYGNVCNT-CGIIMCSAIKHFHKLSGK-KIGLKPAG-----GIS 62 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~~----gat~~~~~~~-~v~lm~~~i~~~~~~~~~-~vgiKaaG-----GIr 62 (106)
+++.|.++|.|. . -+.||- |. .-.||. +++ ..+++++.+++.++.++. .|+||.+. |+.
T Consensus 166 AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGG-slenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 166 GAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGG-SIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSS-SHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCC-ChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 567889999998 4 344431 21 111222 144 477777777777777765 89999997 332
Q ss_pred ---CHHHHHHHHHHHHhhCCCCccC
Q psy969 63 ---TFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 63 ---t~~~a~~~i~l~~~~lGa~w~~ 84 (106)
+.+++.++.+..++ +|.+|++
T Consensus 245 ~~~~~~~~~~la~~l~~-~Gvd~i~ 268 (361)
T 3gka_A 245 DSDPAATFGHVARELGR-RRIAFLF 268 (361)
T ss_dssp CSCHHHHHHHHHHHHHH-TTCSEEE
T ss_pred CCCcHHHHHHHHHHHHH-cCCCEEE
Confidence 35667777665544 6998864
No 94
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=86.00 E-value=1.2 Score=31.21 Aligned_cols=59 Identities=15% Similarity=0.124 Sum_probs=36.4
Q ss_pred HHHhhCCCc-ccCCCCC---CCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 6 KVAFKGSNF-RTLHGRG---PDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 6 iai~aGadF-KTSTG~~---~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.+.|+|| ..++-|. ..+.. +.....+.+..+ .. ++-|=++|||+ .+++.++++ +|++
T Consensus 123 ~~~~~g~d~i~~~~~~~~~~~~~~~-----~~~~~~l~~l~~----~~--~~pvia~GGI~-~~nv~~~~~-----~Ga~ 185 (215)
T 1xi3_A 123 EAEKKGADYLGAGSVFPTKTKEDAR-----VIGLEGLRKIVE----SV--KIPVVAIGGIN-KDNAREVLK-----TGVD 185 (215)
T ss_dssp HHHHHTCSEEEEECSSCC----CCC-----CCHHHHHHHHHH----HC--SSCEEEESSCC-TTTHHHHHT-----TTCS
T ss_pred HHHhcCCCEEEEcCCccCCCCCCCC-----CcCHHHHHHHHH----hC--CCCEEEECCcC-HHHHHHHHH-----cCCC
Confidence 456789999 8654332 11222 334444443221 12 45677899999 999999888 6886
No 95
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=85.74 E-value=2.9 Score=33.31 Aligned_cols=80 Identities=11% Similarity=0.069 Sum_probs=51.6
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------C----CCCCCCCCCch-HHHHHHHHHHHHhhhcCC-ceeEeecCC-----CC
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------P----DSTSYGNVCNT-CGIIMCSAIKHFHKLSGK-KIGLKPAGG-----IS 62 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~----~gat~~~~~~~-~v~lm~~~i~~~~~~~~~-~vgiKaaGG-----Ir 62 (106)
+++.|.++|.|. . -+.||- | ..-.||.. ++ ..+++++.+++.++.++. .|+||.++. +.
T Consensus 158 AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGs-lenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 158 GAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGS-LENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCc-hhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 567889999998 4 344431 2 11112221 44 588888888888887765 899999974 21
Q ss_pred ---CHHHHHHHHHHHHhhCCCCccC
Q psy969 63 ---TFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 63 ---t~~~a~~~i~l~~~~lGa~w~~ 84 (106)
+.+++.++....++ +|.+|++
T Consensus 237 ~~~~~~~~~~la~~l~~-~Gvd~i~ 260 (362)
T 4ab4_A 237 DADRAETFTYVARELGK-RGIAFIC 260 (362)
T ss_dssp CTTHHHHHHHHHHHHHH-TTCSEEE
T ss_pred CCCcHHHHHHHHHHHHH-hCCCEEE
Confidence 25667777665544 6999864
No 96
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=85.72 E-value=2.7 Score=32.77 Aligned_cols=25 Identities=28% Similarity=0.299 Sum_probs=22.1
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++-|=++|||+|.+++.++++ +|++
T Consensus 208 ~iPViaaGGI~~~~~~~~~l~-----~GAd 232 (369)
T 3bw2_A 208 DIPVVAAGGIMRGGQIAAVLA-----AGAD 232 (369)
T ss_dssp SSCEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred CceEEEECCCCCHHHHHHHHH-----cCCC
Confidence 466789999999999999999 7986
No 97
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=85.71 E-value=2.3 Score=32.49 Aligned_cols=64 Identities=17% Similarity=0.147 Sum_probs=39.1
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.++|+|+ .- +|+.+.|.+ +..-+....++.+..+ . -++-|=++|||++.+++.+++. +|++
T Consensus 132 ~~~~~~GaD~i~v-~g~~~GG~~-G~~~~~~~~~l~~v~~----~--~~iPviaaGGI~~~~~v~~al~-----~GAd 196 (328)
T 2gjl_A 132 LKAERLGVDAVSI-DGFECAGHP-GEDDIPGLVLLPAAAN----R--LRVPIIASGGFADGRGLVAALA-----LGAD 196 (328)
T ss_dssp HHHHHTTCSEEEE-ECTTCSBCC-CSSCCCHHHHHHHHHT----T--CCSCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHcCCCEEEE-ECCCCCcCC-CCccccHHHHHHHHHH----h--cCCCEEEECCCCCHHHHHHHHH-----cCCC
Confidence 4577899999 53 343322221 0000234555544321 1 2567889999999999999998 5886
No 98
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=85.63 E-value=4.2 Score=31.25 Aligned_cols=63 Identities=19% Similarity=0.136 Sum_probs=34.4
Q ss_pred hHHHhhCCCc-c--cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-R--TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-K--TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+...+.+.+| - +.+|.. |.... -++++.-+.+.++++ ++.++ =+-+||+|.+++.+.+. .|+|
T Consensus 167 ~~i~~~~~gfiY~vs~~GvT--G~~~~--~~~~~~~~v~~vr~~---~~~Pv--~vGfGIst~e~~~~~~~-----~gAD 232 (271)
T 3nav_A 167 RAVAQLGKGYTYLLSRAGVT--GAETK--ANMPVHALLERLQQF---DAPPA--LLGFGISEPAQVKQAIE-----AGAA 232 (271)
T ss_dssp HHHHHHCCSCEEECCCC------------CCHHHHHHHHHHHHT---TCCCE--EECSSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHCCCeEEEEeccCCC--CcccC--CchhHHHHHHHHHHh---cCCCE--EEECCCCCHHHHHHHHH-----cCCC
Confidence 3445567777 4 454532 22200 134555555555543 33334 34789999999997777 5876
No 99
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=85.42 E-value=0.84 Score=32.85 Aligned_cols=59 Identities=10% Similarity=0.053 Sum_probs=35.3
Q ss_pred hhHHHhhCCCc-ccC--CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 4 PRKVAFKGSNF-RTL--HGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 4 ~~iai~aGadF-KTS--TG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
++...++|+|+ --. +|....+.+ .+.++.+++. ++ +-|=+-|||++.+++..+++ +|+
T Consensus 37 a~~~~~~Gad~i~v~~~d~~~~~~~~-----~~~i~~i~~~-------~~--ipv~v~ggi~~~~~~~~~l~-----~Ga 97 (244)
T 2y88_A 37 ALGWQRDGAEWIHLVDLDAAFGRGSN-----HELLAEVVGK-------LD--VQVELSGGIRDDESLAAALA-----TGC 97 (244)
T ss_dssp HHHHHHTTCSEEEEEEHHHHTTSCCC-----HHHHHHHHHH-------CS--SEEEEESSCCSHHHHHHHHH-----TTC
T ss_pred HHHHHHcCCCEEEEEcCcccccCCCh-----HHHHHHHHHh-------cC--CcEEEECCCCCHHHHHHHHH-----cCC
Confidence 45667889998 432 342222223 2223333322 23 44555699999999999999 798
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
+
T Consensus 98 d 98 (244)
T 2y88_A 98 A 98 (244)
T ss_dssp S
T ss_pred C
Confidence 6
No 100
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=85.15 E-value=3.7 Score=31.82 Aligned_cols=73 Identities=14% Similarity=0.045 Sum_probs=44.9
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.+.|.+. |---|..+.+ + .++.+...+.+++.++..++ .+.|++-||- |.++|+++++..++ +|.+
T Consensus 158 ~~~~~~Gf~~iKik~g~~~~~-~-----~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~-~~~~a~~~~~~l~~-~~i~ 229 (382)
T 1rvk_A 158 ETLVKRGYKGIKLHTWMPPVS-W-----APDVKMDLKACAAVREAVGPDIRLMIDAFHWY-SRTDALALGRGLEK-LGFD 229 (382)
T ss_dssp HHHHHHTCSEEEEECCCTTST-T-----CCCHHHHHHHHHHHHHHHCTTSEEEEECCTTC-CHHHHHHHHHHHHT-TTCS
T ss_pred HHHHHCCCCEEEEcCCcCccc-c-----ccchHHHHHHHHHHHHHhCCCCeEEEECCCCC-CHHHHHHHHHHHHh-cCCC
Confidence 4456778887 7544422111 2 33344444444444444544 5888998876 68999999887665 6888
Q ss_pred cc-CC
Q psy969 82 WL-NK 85 (106)
Q Consensus 82 w~-~~ 85 (106)
|+ +|
T Consensus 230 ~iE~P 234 (382)
T 1rvk_A 230 WIEEP 234 (382)
T ss_dssp EEECC
T ss_pred EEeCC
Confidence 87 44
No 101
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=85.08 E-value=2.5 Score=33.33 Aligned_cols=80 Identities=13% Similarity=0.027 Sum_probs=49.6
Q ss_pred hhhHHHhhCCCc-cc--CCCCC------C----CCCCCCCCCch-HHHHHHHHHHHHhhhcCC-ceeEeecCC-------
Q psy969 3 RPRKVAFKGSNF-RT--LHGRG------P----DSTSYGNVCNT-CGIIMCSAIKHFHKLSGK-KIGLKPAGG------- 60 (106)
Q Consensus 3 ~~~iai~aGadF-KT--STG~~------~----~gat~~~~~~~-~v~lm~~~i~~~~~~~~~-~vgiKaaGG------- 60 (106)
+++.|.++|+|. .- ..||- | ..-.||.. ++ ..+++++.+++.++.++. .|+||.+.-
T Consensus 166 aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGs-lenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~ 244 (365)
T 2gou_A 166 AALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGS-LENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTV 244 (365)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSS-HHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCC
T ss_pred HHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcc-hhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCC
Confidence 456788999998 53 44432 1 11112211 33 466777777777676764 899999962
Q ss_pred -CCCHHHHHHHHHHHHhhCCCCccC
Q psy969 61 -ISTFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 61 -Irt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
=.+.+++.++.+..++ +|++|++
T Consensus 245 ~~~~~~~~~~~a~~l~~-~G~d~i~ 268 (365)
T 2gou_A 245 DADPILTYTAAAALLNK-HRIVYLH 268 (365)
T ss_dssp CSSHHHHHHHHHHHHHH-TTCSEEE
T ss_pred CCCCHHHHHHHHHHHHH-cCCCEEE
Confidence 1367787777776554 6998863
No 102
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=84.96 E-value=0.64 Score=35.32 Aligned_cols=56 Identities=14% Similarity=0.125 Sum_probs=36.0
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..|.++|+|+ |. | |.. . ..-...++ .+ .... +.+-+=+.|||. .+.+.+|++ +|+.
T Consensus 141 ~~A~~~Gad~vK~---F-Pa~-~-----~gG~~~lk-al---~~p~-p~ip~~ptGGI~-~~n~~~~l~-----aGa~ 197 (232)
T 4e38_A 141 EAALEMGLTTLKF---F-PAE-A-----SGGISMVK-SL---VGPY-GDIRLMPTGGIT-PSNIDNYLA-----IPQV 197 (232)
T ss_dssp HHHHHTTCCEEEE---C-STT-T-----TTHHHHHH-HH---HTTC-TTCEEEEBSSCC-TTTHHHHHT-----STTB
T ss_pred HHHHHcCCCEEEE---C-cCc-c-----ccCHHHHH-HH---HHHh-cCCCeeeEcCCC-HHHHHHHHH-----CCCe
Confidence 3578899999 97 3 322 1 11223332 22 2212 468888999995 899999999 7874
No 103
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=84.86 E-value=0.49 Score=36.96 Aligned_cols=63 Identities=21% Similarity=0.173 Sum_probs=44.5
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.|+++|||+ ---+ -+ ++.++...+.++.. .+++.|=+|||| |++.+.+|.+ .|+|
T Consensus 207 ~eA~~aGaD~I~LDn------~~-----~e~l~~av~~l~~~----~~~v~ieASGGI-t~eni~~~a~-----tGVD-- 263 (285)
T 1o4u_A 207 LRAVEAGADIVMLDN------LS-----PEEVKDISRRIKDI----NPNVIVEVSGGI-TEENVSLYDF-----ETVD-- 263 (285)
T ss_dssp HHHHHTTCSEEEEES------CC-----HHHHHHHHHHHHHH----CTTSEEEEEECC-CTTTGGGGCC-----TTCC--
T ss_pred HHHHHcCCCEEEECC------CC-----HHHHHHHHHHhhcc----CCCceEEEECCC-CHHHHHHHHH-----cCCC--
Confidence 4578889999 4333 34 67766665555421 247899999999 6788889988 7886
Q ss_pred CCCceeEeccch
Q psy969 84 NKDLFRIGASSL 95 (106)
Q Consensus 84 ~~~~~RiGtSs~ 95 (106)
.|+.+++
T Consensus 264 -----~IsvGsl 270 (285)
T 1o4u_A 264 -----VISSSRL 270 (285)
T ss_dssp -----EEEEGGG
T ss_pred -----EEEEeHH
Confidence 7766654
No 104
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=84.78 E-value=0.8 Score=33.43 Aligned_cols=55 Identities=13% Similarity=0.059 Sum_probs=35.5
Q ss_pred hHHHhhCCCc-ccCCCCCCCCC-CCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDST-SYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~ga-t~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..|.+.|+|| |- |..... . ++-++.++.. . +.+-|=+.|||. .+.+.+|++ +|++
T Consensus 118 ~~A~~~Gad~v~~---fpa~~~gG-----~~~lk~l~~~-------~-~~ipvvaiGGI~-~~n~~~~l~-----aGa~ 174 (207)
T 2yw3_A 118 ERALALGLSALKF---FPAEPFQG-----VRVLRAYAEV-------F-PEVRFLPTGGIK-EEHLPHYAA-----LPNL 174 (207)
T ss_dssp HHHHHTTCCEEEE---TTTTTTTH-----HHHHHHHHHH-------C-TTCEEEEBSSCC-GGGHHHHHT-----CSSB
T ss_pred HHHHHCCCCEEEE---ecCccccC-----HHHHHHHHhh-------C-CCCcEEEeCCCC-HHHHHHHHh-----CCCc
Confidence 4567889999 86 421111 1 2333333322 2 367888999997 699999999 7885
No 105
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=84.57 E-value=2.4 Score=32.62 Aligned_cols=63 Identities=19% Similarity=0.221 Sum_probs=38.7
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.+.++|+|| .-. |....+-+ +. .....++.+..+ .. ++-|=++|||+|.+++.+++. +|++
T Consensus 123 a~~~~~~GaD~i~v~-g~~~GG~~-g~--~~~~~ll~~i~~----~~--~iPViaaGGI~~~~~~~~al~-----~GAd 186 (332)
T 2z6i_A 123 AKRMEKIGADAVIAE-GMEAGGHI-GK--LTTMTLVRQVAT----AI--SIPVIAAGGIADGEGAAAGFM-----LGAE 186 (332)
T ss_dssp HHHHHHTTCSCEEEE-CTTSSEEC-CS--SCHHHHHHHHHH----HC--SSCEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHHcCCCEEEEE-CCCCCCCC-CC--ccHHHHHHHHHH----hc--CCCEEEECCCCCHHHHHHHHH-----cCCC
Confidence 35677899999 542 33222111 00 234444443322 12 466789999999999999999 7986
No 106
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=84.50 E-value=2 Score=30.42 Aligned_cols=23 Identities=30% Similarity=0.524 Sum_probs=19.7
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=++|||+ .+++.++++ +|++
T Consensus 173 ~pvia~GGI~-~~nv~~~~~-----~Ga~ 195 (227)
T 2tps_A 173 IPIVGIGGIT-IDNAAPVIQ-----AGAD 195 (227)
T ss_dssp CCEEEESSCC-TTTSHHHHH-----TTCS
T ss_pred CCEEEEcCCC-HHHHHHHHH-----cCCC
Confidence 6678899999 999999888 6885
No 107
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=84.49 E-value=1.7 Score=34.36 Aligned_cols=60 Identities=18% Similarity=0.147 Sum_probs=41.6
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.|+++|+|. .=-+ -+ +++++...+.+ .+++.|=+|||| |.+...+|.+ .|+|
T Consensus 223 ~eAl~aGaD~I~LDn------~~-----~~~l~~av~~i-------~~~v~ieaSGGI-~~~~i~~~a~-----tGVD-- 276 (298)
T 3gnn_A 223 RTALAHGARSVLLDN------FT-----LDMMRDAVRVT-------EGRAVLEVSGGV-NFDTVRAIAE-----TGVD-- 276 (298)
T ss_dssp HHHHHTTCEEEEEES------CC-----HHHHHHHHHHH-------TTSEEEEEESSC-STTTHHHHHH-----TTCS--
T ss_pred HHHHHcCCCEEEECC------CC-----HHHHHHHHHHh-------CCCCeEEEEcCC-CHHHHHHHHH-----cCCC--
Confidence 4577788888 5433 23 55544443332 578999999999 7888899998 7997
Q ss_pred CCCceeEeccch
Q psy969 84 NKDLFRIGASSL 95 (106)
Q Consensus 84 ~~~~~RiGtSs~ 95 (106)
.|+.+++
T Consensus 277 -----~isvG~l 283 (298)
T 3gnn_A 277 -----RISIGAL 283 (298)
T ss_dssp -----EEECGGG
T ss_pred -----EEEECCe
Confidence 6666554
No 108
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=84.34 E-value=1.4 Score=32.08 Aligned_cols=60 Identities=20% Similarity=0.222 Sum_probs=36.2
Q ss_pred hHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.+.|+++ -|+... .+... ..+..++.+. + +. -++-|=++|||++.+++.++++ +|++
T Consensus 163 ~~~~~~G~~~i~~t~~~~--~g~~~----g~~~~~i~~l-~---~~--~~ipvia~GGI~~~ed~~~~~~-----~Gad 224 (266)
T 2w6r_A 163 VEVEKRGAGEILLTSIDR--DGTKS----GYDTEMIRFV-R---PL--TTLPIIASGGAGKMEHFLEAFL-----AGAD 224 (266)
T ss_dssp HHHHHTTCSEEEEEETTT--TTTCS----CCCHHHHHHH-G---GG--CCSCEEEESCCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHcCCCEEEEEeecC--CCCcC----CCCHHHHHHH-H---HH--cCCCEEEeCCCCCHHHHHHHHH-----cCCH
Confidence 4567789998 554332 22210 1123333322 1 11 2466778999999999999997 5875
No 109
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=84.24 E-value=1.3 Score=32.96 Aligned_cols=26 Identities=23% Similarity=0.353 Sum_probs=22.8
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..+.|=.-|||||.+++..+++ +|++
T Consensus 74 ~~~pl~vGGGIrs~e~~~~~l~-----~Gad 99 (243)
T 4gj1_A 74 VSVNLQVGGGIRSKEEVKALLD-----CGVK 99 (243)
T ss_dssp CCSEEEEESSCCCHHHHHHHHH-----TTCS
T ss_pred cCCCeEeccccccHHHHHHHHH-----cCCC
Confidence 3467778899999999999999 7996
No 110
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=84.19 E-value=1.9 Score=40.95 Aligned_cols=71 Identities=17% Similarity=0.137 Sum_probs=42.1
Q ss_pred hHHHhhCCCcccCCCCCC-CCCC-------CCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHh
Q psy969 5 RKVAFKGSNFRTLHGRGP-DSTS-------YGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLI 76 (106)
Q Consensus 5 ~iai~aGadFKTSTG~~~-~gat-------~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~ 76 (106)
+.+.++|||+-+-.|+.. .+++ .+-|-...+..+.+++.+. ....+|-|=++|||+|..|+.+.+.
T Consensus 1046 ~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~ev~~al~~~--glr~~IpVIAdGGIrtG~DVakALa---- 1119 (1520)
T 1ofd_A 1046 AGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTEVHRVLMEN--QLRDRVLLRADGGLKTGWDVVMAAL---- 1119 (1520)
T ss_dssp HHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHHHHHHHHHT--TCGGGCEEEEESSCCSHHHHHHHHH----
T ss_pred HHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHHHHHHHHhc--CCCCCceEEEECCCCCHHHHHHHHH----
Confidence 457789999933445431 2222 0111122233333322211 0134799999999999999999999
Q ss_pred hCCCCc
Q psy969 77 MLGPDW 82 (106)
Q Consensus 77 ~lGa~w 82 (106)
|||++
T Consensus 1120 -LGAda 1124 (1520)
T 1ofd_A 1120 -MGAEE 1124 (1520)
T ss_dssp -TTCSE
T ss_pred -cCCCe
Confidence 79973
No 111
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=83.59 E-value=1.2 Score=32.01 Aligned_cols=21 Identities=19% Similarity=0.309 Sum_probs=19.1
Q ss_pred ceeEeecCCCCCHHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++-|=++|||++.+++.++++
T Consensus 193 ~ipvia~GGI~~~~d~~~~~~ 213 (244)
T 2y88_A 193 DAPVIASGGVSSLDDLRAIAT 213 (244)
T ss_dssp SSCEEEESCCCSHHHHHHHHT
T ss_pred CCCEEEECCCCCHHHHHHHHh
Confidence 567889999999999999998
No 112
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=83.51 E-value=2.9 Score=33.34 Aligned_cols=60 Identities=15% Similarity=0.119 Sum_probs=43.4
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.|+++|+|+ .=-+ -+ +++++...+.+ ++++.|=+||||. .+...+|.+ .|+|
T Consensus 245 ~eAl~aGaD~I~LDn------~~-----~~~l~~av~~l-------~~~v~ieaSGGIt-~~~I~~~a~-----tGVD-- 298 (320)
T 3paj_A 245 EEAISAGADIIMLDN------FS-----LEMMREAVKIN-------AGRAALENSGNIT-LDNLKECAE-----TGVD-- 298 (320)
T ss_dssp HHHHHTTCSEEEEES------CC-----HHHHHHHHHHH-------TTSSEEEEESSCC-HHHHHHHHT-----TTCS--
T ss_pred HHHHHcCCCEEEECC------CC-----HHHHHHHHHHh-------CCCCeEEEECCCC-HHHHHHHHH-----cCCC--
Confidence 4577889998 5433 24 66655554433 4789999999995 888888988 7996
Q ss_pred CCCceeEeccch
Q psy969 84 NKDLFRIGASSL 95 (106)
Q Consensus 84 ~~~~~RiGtSs~ 95 (106)
.|+++++
T Consensus 299 -----~isvGal 305 (320)
T 3paj_A 299 -----YISVGAL 305 (320)
T ss_dssp -----EEECTHH
T ss_pred -----EEEECce
Confidence 7777664
No 113
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=83.34 E-value=2.6 Score=30.34 Aligned_cols=60 Identities=18% Similarity=0.205 Sum_probs=36.7
Q ss_pred hHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.+.|++. -|++... +... -.+...+.+. + +.. .+-|=++|||++.+++.++++ .|++
T Consensus 158 ~~~~~~G~~~i~~~~~~~~--g~~~----g~~~~~~~~l-~---~~~--~ipvia~GGI~~~~d~~~~~~-----~Gad 219 (253)
T 1thf_D 158 VEVEKRGAGEILLTSIDRD--GTKS----GYDTEMIRFV-R---PLT--TLPIIASGGAGKMEHFLEAFL-----AGAD 219 (253)
T ss_dssp HHHHHTTCSEEEEEETTTT--TSCS----CCCHHHHHHH-G---GGC--CSCEEEESCCCSHHHHHHHHH-----TTCS
T ss_pred HHHHHCCCCEEEEEeccCC--CCCC----CCCHHHHHHH-H---Hhc--CCCEEEECCCCCHHHHHHHHH-----cCCh
Confidence 5567889995 5655422 2110 1123333322 2 112 466789999999999999998 6885
No 114
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=82.79 E-value=4.3 Score=33.96 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=52.2
Q ss_pred hhhHHHhhCCCc---ccCCCC-----------CCCCCCCCCCCch-HHHHHHHHHHHHhhhcCC--ceeEeecC------
Q psy969 3 RPRKVAFKGSNF---RTLHGR-----------GPDSTSYGNVCNT-CGIIMCSAIKHFHKLSGK--KIGLKPAG------ 59 (106)
Q Consensus 3 ~~~iai~aGadF---KTSTG~-----------~~~gat~~~~~~~-~v~lm~~~i~~~~~~~~~--~vgiKaaG------ 59 (106)
+++.|.++|.|. --..|| ....-.||.. ++ ..+++++.+++.++.++. .|+||.|.
T Consensus 161 aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs-~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~ 239 (690)
T 3k30_A 161 AVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGS-LENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDG 239 (690)
T ss_dssp HHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTT
T ss_pred HHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCC-HHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCC
Confidence 567889999999 567888 2222223222 44 577888888887777765 59999964
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCc
Q psy969 60 GISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 60 GIrt~~~a~~~i~l~~~~lGa~w 82 (106)
|+ +.+++.++..+.++ |.++
T Consensus 240 g~-~~~~~~~~~~~l~~--~~d~ 259 (690)
T 3k30_A 240 GI-TREDIEGVLRELGE--LPDL 259 (690)
T ss_dssp SC-CHHHHHHHHHHHTT--SSSE
T ss_pred CC-CHHHHHHHHHHHHh--hcCE
Confidence 43 46888888888776 4553
No 115
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=82.78 E-value=4.6 Score=31.80 Aligned_cols=79 Identities=16% Similarity=0.234 Sum_probs=52.1
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------C----CCCCCCCCCch-HHHHHHHHHHHHhhhcCC--ceeEeecCC-----C
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------P----DSTSYGNVCNT-CGIIMCSAIKHFHKLSGK--KIGLKPAGG-----I 61 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~----~gat~~~~~~~-~v~lm~~~i~~~~~~~~~--~vgiKaaGG-----I 61 (106)
+++.|.++|.|. . -..||- | ..-.||.. ++ ..+++++.+++.++.+++ .|+||.+.. =
T Consensus 148 AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGs-lenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g 226 (343)
T 3kru_A 148 AAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNS-IENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGG 226 (343)
T ss_dssp HHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTS
T ss_pred HHhhccccCCceEEEecccchhHHHhhcccccccchhhccc-hHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccC
Confidence 567888999997 3 233321 1 11112211 44 577888888888888864 699999951 2
Q ss_pred CCHHHHHHHHHHHHhhCCCCccC
Q psy969 62 STFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 62 rt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
-+.+++.++.+..++. .+|++
T Consensus 227 ~~~~~~~~~a~~l~~~--vd~i~ 247 (343)
T 3kru_A 227 INIDMMVEYINMIKDK--VDLID 247 (343)
T ss_dssp CCHHHHHHHHHHHTTT--CSEEE
T ss_pred ccHHHHHHHHHHhhcc--ccEEe
Confidence 4689999998887776 77764
No 116
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=82.72 E-value=0.85 Score=34.52 Aligned_cols=56 Identities=21% Similarity=0.154 Sum_probs=36.6
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..|.++|+|+ |. .|.... .-...++ .+ +... +.+-+=+.|||. .+.+.+|++ +|+.
T Consensus 126 ~~A~~~Gad~vK~----FPa~~~------gG~~~lk-al---~~p~-p~i~~~ptGGI~-~~N~~~~l~-----aGa~ 182 (217)
T 3lab_A 126 MIAAQAGITQLKC----FPASAI------GGAKLLK-AW---SGPF-PDIQFCPTGGIS-KDNYKEYLG-----LPNV 182 (217)
T ss_dssp HHHHHTTCCEEEE----TTTTTT------THHHHHH-HH---HTTC-TTCEEEEBSSCC-TTTHHHHHH-----STTB
T ss_pred HHHHHcCCCEEEE----Cccccc------cCHHHHH-HH---Hhhh-cCceEEEeCCCC-HHHHHHHHH-----CCCE
Confidence 3578899999 96 232221 1122322 22 2223 468899999999 899999999 7874
No 117
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=81.45 E-value=2.7 Score=32.96 Aligned_cols=59 Identities=19% Similarity=0.112 Sum_probs=38.1
Q ss_pred hhHHHhhCCCcccCCC----CCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 4 PRKVAFKGSNFRTLHG----RGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 4 ~~iai~aGadFKTSTG----~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
++...++|+++--.-| =+.+-.+ ++-++.+++. .++-|=+.|||.|.+||...++ +|
T Consensus 149 akrl~~~G~~aVmPlg~pIGsG~Gi~~-----~~lI~~I~e~---------~~vPVI~eGGI~TPsDAa~Ame-----LG 209 (265)
T 1wv2_A 149 ARQLAEIGCIAVMPLAGLIGSGLGICN-----PYNLRIILEE---------AKVPVLVDAGVGTASDAAIAME-----LG 209 (265)
T ss_dssp HHHHHHSCCSEEEECSSSTTCCCCCSC-----HHHHHHHHHH---------CSSCBEEESCCCSHHHHHHHHH-----HT
T ss_pred HHHHHHhCCCEEEeCCccCCCCCCcCC-----HHHHHHHHhc---------CCCCEEEeCCCCCHHHHHHHHH-----cC
Confidence 4566788999822222 1111134 5555555543 3455666899999999999999 69
Q ss_pred CC
Q psy969 80 PD 81 (106)
Q Consensus 80 a~ 81 (106)
++
T Consensus 210 Ad 211 (265)
T 1wv2_A 210 CE 211 (265)
T ss_dssp CS
T ss_pred CC
Confidence 96
No 118
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=81.30 E-value=3.6 Score=35.31 Aligned_cols=59 Identities=27% Similarity=0.286 Sum_probs=41.4
Q ss_pred hhhHHHhhCCCc---ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 3 RPRKVAFKGSNF---RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 3 ~~~iai~aGadF---KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
+.+..+++|+|+ -|++|.. +.+..+.+.|++. . +.+-|= +|.|-|.+.|+++++ +|
T Consensus 285 R~~aLv~AGvD~iviD~ahGhs-----------~~v~~~i~~ik~~---~-p~~~vi-aGNVaT~e~a~~Li~-----aG 343 (556)
T 4af0_A 285 RLKLLAEAGLDVVVLDSSQGNS-----------VYQIEFIKWIKQT---Y-PKIDVI-AGNVVTREQAAQLIA-----AG 343 (556)
T ss_dssp HHHHHHHTTCCEEEECCSCCCS-----------HHHHHHHHHHHHH---C-TTSEEE-EEEECSHHHHHHHHH-----HT
T ss_pred HHHHHHhcCCcEEEEecccccc-----------HHHHHHHHHHHhh---C-CcceEE-eccccCHHHHHHHHH-----cC
Confidence 456778999998 7888763 2333344444432 2 567774 499999999999999 59
Q ss_pred CCc
Q psy969 80 PDW 82 (106)
Q Consensus 80 a~w 82 (106)
+|-
T Consensus 344 AD~ 346 (556)
T 4af0_A 344 ADG 346 (556)
T ss_dssp CSE
T ss_pred CCE
Confidence 863
No 119
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=81.04 E-value=0.86 Score=33.07 Aligned_cols=55 Identities=13% Similarity=0.060 Sum_probs=35.4
Q ss_pred hHHHhhCCCc--ccCCCCC--CCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHH
Q psy969 5 RKVAFKGSNF--RTLHGRG--PDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYL 73 (106)
Q Consensus 5 ~iai~aGadF--KTSTG~~--~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l 73 (106)
+.+.+.|+++ -|++... ..+.+ .+.++.+++. + ++-|=++|||++.+++.++.++
T Consensus 151 ~~~~~~G~~~i~~t~~~~~g~~~g~~-----~~~i~~l~~~-------~--~iPvia~GGI~~~~d~~~~~~~ 209 (241)
T 1qo2_A 151 KRLKEYGLEEIVHTEIEKDGTLQEHD-----FSLTKKIAIE-------A--EVKVLAAGGISSENSLKTAQKV 209 (241)
T ss_dssp HHHHTTTCCEEEEEETTHHHHTCCCC-----HHHHHHHHHH-------H--TCEEEEESSCCSHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEeecccccCCcCC-----HHHHHHHHHh-------c--CCcEEEECCCCCHHHHHHHHhc
Confidence 3466789997 6665321 12233 4444444433 2 4667789999999999999983
No 120
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=80.89 E-value=1.7 Score=33.70 Aligned_cols=66 Identities=6% Similarity=0.042 Sum_probs=38.1
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCcee-EeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIG-LKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vg-iKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
+.+.+.+.|||| |+..+..+.+ + ++..+-+.+.... . -.+. |=++||| +.++.++.+..+.+ .|+
T Consensus 182 aa~~a~~lGaD~iKv~~~~~~~g-~-----~~~~~~vv~~~~~---~--~~~P~Vv~aGG~-~~~~~~~~~~~a~~-aGa 248 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLYGKG-A-----RSDLLTASQRLNG---H--INMPWVILSSGV-DEKLFPRAVRVAME-AGA 248 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGGGCS-C-----HHHHHHHHHHHHH---T--CCSCEEECCTTS-CTTTHHHHHHHHHH-TTC
T ss_pred HHHHHHHcCCCEEEeCCCcCCCC-C-----HHHHHHHHHhccc---c--CCCCeEEEecCC-CHHHHHHHHHHHHH-cCC
Confidence 467778889999 9988522111 4 5554444333211 1 1344 6679999 66665555555544 476
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
.
T Consensus 249 ~ 249 (304)
T 1to3_A 249 S 249 (304)
T ss_dssp C
T ss_pred e
Confidence 3
No 121
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=80.87 E-value=2.1 Score=30.60 Aligned_cols=63 Identities=11% Similarity=-0.110 Sum_probs=40.3
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCH-HHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTF-EDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~-~~a~~~i~l~~~~lGa~ 81 (106)
.+++.+.|++. +.+ +.+ ++.++.+++. .+...-+ +.|||+.- .++.+.++ +|++
T Consensus 125 ~~~a~~~G~~G~~~~------~~~-----~~~i~~lr~~-------~~~~~~i-v~gGI~~~g~~~~~~~~-----aGad 180 (208)
T 2czd_A 125 IEVANEIEPFGVIAP------GTR-----PERIGYIRDR-------LKEGIKI-LAPGIGAQGGKAKDAVK-----AGAD 180 (208)
T ss_dssp HHHHHHHCCSEEECC------CSS-----THHHHHHHHH-------SCTTCEE-EECCCCSSTTHHHHHHH-----HTCS
T ss_pred HHHHHHhCCcEEEEC------CCC-----hHHHHHHHHh-------CCCCeEE-EECCCCCCCCCHHHHHH-----cCCC
Confidence 45677888888 654 234 7777776654 3444557 99999963 25777777 5987
Q ss_pred ccCCCceeE
Q psy969 82 WLNKDLFRI 90 (106)
Q Consensus 82 w~~~~~~Ri 90 (106)
++--+..-+
T Consensus 181 ~vvvGr~I~ 189 (208)
T 2czd_A 181 YIIVGRAIY 189 (208)
T ss_dssp EEEECHHHH
T ss_pred EEEEChHHh
Confidence 544433333
No 122
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=80.69 E-value=2.1 Score=31.80 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=34.5
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..++|+++|||| -++ + .+ ++.++.-++ .+..+- + |+.|.+++.+..+ +|++
T Consensus 81 ~~~~A~~aGAd~v~~p-~-----~d-----~~v~~~ar~--------~g~~~i--~--Gv~t~~e~~~A~~-----~Gad 132 (224)
T 1vhc_A 81 QVVLAKSSGADFVVTP-G-----LN-----PKIVKLCQD--------LNFPIT--P--GVNNPMAIEIALE-----MGIS 132 (224)
T ss_dssp HHHHHHHHTCSEEECS-S-----CC-----HHHHHHHHH--------TTCCEE--C--EECSHHHHHHHHH-----TTCC
T ss_pred HHHHHHHCCCCEEEEC-C-----CC-----HHHHHHHHH--------hCCCEE--e--ccCCHHHHHHHHH-----CCCC
Confidence 467899999999 755 2 23 333333221 133322 2 5999999999888 7998
Q ss_pred cc
Q psy969 82 WL 83 (106)
Q Consensus 82 w~ 83 (106)
++
T Consensus 133 ~v 134 (224)
T 1vhc_A 133 AV 134 (224)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 123
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=80.62 E-value=0.33 Score=35.55 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=0.0
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++-|=++|||+|.+++.++++ +|++
T Consensus 200 ~iPvia~GGI~~~~d~~~~~~-----~Gad 224 (247)
T 3tdn_A 200 TLPIIASGGAGKMEHFLEAFL-----RGAD 224 (247)
T ss_dssp ------------------------------
T ss_pred CCCEEEECCCCCHHHHHHHHH-----cCCc
Confidence 355668999999999999998 5765
No 124
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=79.83 E-value=3.9 Score=33.10 Aligned_cols=62 Identities=16% Similarity=0.116 Sum_probs=37.1
Q ss_pred hhHHHh-hCCCc-ccCCCCC----CCCCCCCCC-CchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAF-KGSNF-RTLHGRG----PDSTSYGNV-CNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~-aGadF-KTSTG~~----~~gat~~~~-~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++...+ +|+|| --|.|-. ......+.. -.+.++.+++. .++++-|=+.|||+|.++|.++++
T Consensus 270 a~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~-------v~~~iPVI~~GgI~t~e~Ae~~L~ 338 (419)
T 3l5a_A 270 IDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEH-------LAGRIPLIASGGINSPESALDALQ 338 (419)
T ss_dssp HHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHH-------HTTSSCEEECSSCCSHHHHHHHGG
T ss_pred HHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHH-------cCCCCeEEEECCCCCHHHHHHHHH
Confidence 345566 89999 5555421 000000000 03445555544 345677888999999999999998
No 125
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=79.69 E-value=2.6 Score=30.92 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=33.6
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..++|+++|||| -++ + .+ ++.++. ++. .+..+ -+ |+.|.+++.+-.+ +|++
T Consensus 80 ~~~~A~~aGAd~v~~p-~-----~d-----~~v~~~-~~~-------~g~~~--i~--G~~t~~e~~~A~~-----~Gad 131 (214)
T 1wbh_A 80 QLAEVTEAGAQFAISP-G-----LT-----EPLLKA-ATE-------GTIPL--IP--GISTVSELMLGMD-----YGLK 131 (214)
T ss_dssp HHHHHHHHTCSCEEES-S-----CC-----HHHHHH-HHH-------SSSCE--EE--EESSHHHHHHHHH-----TTCC
T ss_pred HHHHHHHcCCCEEEcC-C-----CC-----HHHHHH-HHH-------hCCCE--EE--ecCCHHHHHHHHH-----CCCC
Confidence 467899999999 643 3 23 332222 211 23222 22 5999999999888 7998
Q ss_pred cc
Q psy969 82 WL 83 (106)
Q Consensus 82 w~ 83 (106)
++
T Consensus 132 ~v 133 (214)
T 1wbh_A 132 EF 133 (214)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 126
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=79.57 E-value=1.1 Score=31.41 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=36.3
Q ss_pred HHhhCCCc-ccCCCCCC--CCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 7 VAFKGSNF-RTLHGRGP--DSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 7 ai~aGadF-KTSTG~~~--~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.|+|| +...++.+ .|.. +.. +.+++.. +. .+-|=+.|||+ .+++.++++ .|++
T Consensus 123 ~~~~g~d~v~~~~~~~~~~~g~~-----~~~-~~i~~~~----~~---~~pi~v~GGI~-~~~~~~~~~-----aGad 181 (207)
T 3ajx_A 123 VRALGAKFVEMHAGLDEQAKPGF-----DLN-GLLAAGE----KA---RVPFSVAGGVK-VATIPAVQK-----AGAE 181 (207)
T ss_dssp HHHTTCSEEEEECCHHHHTSTTC-----CTH-HHHHHHH----HH---TSCEEEESSCC-GGGHHHHHH-----TTCS
T ss_pred HHHhCCCEEEEEecccccccCCC-----chH-HHHHHhh----CC---CCCEEEECCcC-HHHHHHHHH-----cCCC
Confidence 34569999 88766643 3333 333 4444332 11 45677899999 788888888 7997
No 127
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=79.25 E-value=12 Score=28.51 Aligned_cols=52 Identities=17% Similarity=-0.005 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccchHHHHH
Q psy969 33 TCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLNNIL 100 (106)
Q Consensus 33 ~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~~~~l~ 100 (106)
+++.-+.+.++++ .. +-|=+-|||+|.+++.+.+. .|+| ..-+| |..++.+.
T Consensus 192 ~~~~~~v~~vr~~---~~--~pv~vGfGI~~~e~~~~~~~-----~gAD-----gvVVG-Saiv~~i~ 243 (267)
T 3vnd_A 192 EPIENILTQLAEF---NA--PPPLLGFGIAEPEQVRAAIK-----AGAA-----GAISG-SAVVKIIE 243 (267)
T ss_dssp -CHHHHHHHHHTT---TC--CCEEECSSCCSHHHHHHHHH-----TTCS-----EEEEC-HHHHHHHH
T ss_pred HHHHHHHHHHHHh---cC--CCEEEECCcCCHHHHHHHHH-----cCCC-----EEEEC-HHHHHHHH
Confidence 3344444455443 33 33445789999999997777 5885 44556 45555554
No 128
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=79.20 E-value=7.3 Score=31.00 Aligned_cols=81 Identities=12% Similarity=0.106 Sum_probs=51.6
Q ss_pred hhhHHH-hhCCCc-c--cCCCC------CCC-----CCCCCCCCch-HHHHHHHHHHHHhhhcCC-ceeEeecCC-----
Q psy969 3 RPRKVA-FKGSNF-R--TLHGR------GPD-----STSYGNVCNT-CGIIMCSAIKHFHKLSGK-KIGLKPAGG----- 60 (106)
Q Consensus 3 ~~~iai-~aGadF-K--TSTG~------~~~-----gat~~~~~~~-~v~lm~~~i~~~~~~~~~-~vgiKaaGG----- 60 (106)
+++.|. ++|.|. + -..|| .|. .-.||...++ ..+++++.+++.++.++. .|+||.+.-
T Consensus 179 AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~~~~~~~ 258 (379)
T 3aty_A 179 GAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISPLNGVHG 258 (379)
T ss_dssp HHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGG
T ss_pred HHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECccccccc
Confidence 467788 899998 5 33332 111 1112221144 578888888888777764 699999862
Q ss_pred C---CCHHHHHHHHHHHHhhCCCCccC
Q psy969 61 I---STFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 61 I---rt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
+ -+.+++.++++..++ +|.+|++
T Consensus 259 ~~~~~~~~~~~~la~~l~~-~Gvd~i~ 284 (379)
T 3aty_A 259 MIDSNPEALTKHLCKKIEP-LSLAYLH 284 (379)
T ss_dssp CCCSCHHHHHHHHHHHHGG-GCCSEEE
T ss_pred CCCCCCHHHHHHHHHHHHH-hCCCEEE
Confidence 1 256788888776654 5898863
No 129
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=79.16 E-value=4 Score=29.63 Aligned_cols=53 Identities=19% Similarity=0.154 Sum_probs=33.7
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..++|+++|||| -++ ++ + .+.++..++ .+..+.+ |+.|.+++.+..+ +|+|
T Consensus 75 ~~~~A~~~GAd~v~~~-~~-----d-----~~v~~~~~~--------~g~~~i~----G~~t~~e~~~A~~-----~Gad 126 (207)
T 2yw3_A 75 EAEAALEAGAAFLVSP-GL-----L-----EEVAALAQA--------RGVPYLP----GVLTPTEVERALA-----LGLS 126 (207)
T ss_dssp HHHHHHHHTCSEEEES-SC-----C-----HHHHHHHHH--------HTCCEEE----EECSHHHHHHHHH-----TTCC
T ss_pred HHHHHHHcCCCEEEcC-CC-----C-----HHHHHHHHH--------hCCCEEe----cCCCHHHHHHHHH-----CCCC
Confidence 457899999999 643 32 2 332233221 1333322 5999999999888 7998
Q ss_pred cc
Q psy969 82 WL 83 (106)
Q Consensus 82 w~ 83 (106)
++
T Consensus 127 ~v 128 (207)
T 2yw3_A 127 AL 128 (207)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 130
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=79.16 E-value=4.4 Score=29.83 Aligned_cols=25 Identities=24% Similarity=0.142 Sum_probs=21.2
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++-|=+.|||+|.+++.++++ +|++
T Consensus 201 ~~pI~vgGGI~~~e~~~~~~~-----~GAd 225 (262)
T 1rd5_A 201 NKPVAVGFGISKPEHVKQIAQ-----WGAD 225 (262)
T ss_dssp SSCEEEESCCCSHHHHHHHHH-----TTCS
T ss_pred CCeEEEECCcCCHHHHHHHHH-----cCCC
Confidence 355667899999999999999 7986
No 131
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=78.72 E-value=2 Score=32.91 Aligned_cols=22 Identities=32% Similarity=0.191 Sum_probs=19.7
Q ss_pred ceeEeecCCCCCHHHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIYL 73 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l 73 (106)
++-|=++|||+|.+++.++++.
T Consensus 183 ~ipVi~~GgI~s~~da~~~l~~ 204 (318)
T 1vhn_A 183 RIPTFVSGDIFTPEDAKRALEE 204 (318)
T ss_dssp SSCEEEESSCCSHHHHHHHHHH
T ss_pred CCeEEEECCcCCHHHHHHHHHc
Confidence 6778899999999999999984
No 132
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=78.67 E-value=5.6 Score=32.21 Aligned_cols=27 Identities=30% Similarity=0.306 Sum_probs=23.3
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
++-|=++|||++..|+.+.+. +|++-+
T Consensus 328 ~vpVia~GGi~~~~di~kala-----lGA~~v 354 (486)
T 2cu0_A 328 GLYVIADGGIRYSGDIVKAIA-----AGADAV 354 (486)
T ss_dssp TCEEEEESCCCSHHHHHHHHH-----TTCSEE
T ss_pred CCcEEecCCCCCHHHHHHHHH-----cCCCce
Confidence 467889999999999999998 798743
No 133
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=78.12 E-value=2.3 Score=30.02 Aligned_cols=24 Identities=13% Similarity=0.239 Sum_probs=19.7
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.|=++|||+ .+++.++++ +|++
T Consensus 170 ~~~i~v~GGI~-~~~~~~~~~-----~Gad 193 (220)
T 2fli_A 170 SFDIEVDGGVD-NKTIRACYE-----AGAN 193 (220)
T ss_dssp CCEEEEESSCC-TTTHHHHHH-----HTCC
T ss_pred CceEEEECcCC-HHHHHHHHH-----cCCC
Confidence 56677999999 788888888 5886
No 134
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=77.73 E-value=2 Score=30.10 Aligned_cols=55 Identities=13% Similarity=0.228 Sum_probs=35.7
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.+.|+|+ |.-. .. +.....+.+. .+..+ ++-|=++|||+ .+++.++++ +|++
T Consensus 118 ~~a~~~Gad~vk~~~------~~-----~~g~~~~~~l----~~~~~-~~pvia~GGI~-~~~~~~~~~-----~Ga~ 173 (205)
T 1wa3_A 118 VKAMKLGHTILKLFP------GE-----VVGPQFVKAM----KGPFP-NVKFVPTGGVN-LDNVCEWFK-----AGVL 173 (205)
T ss_dssp HHHHHTTCCEEEETT------HH-----HHHHHHHHHH----HTTCT-TCEEEEBSSCC-TTTHHHHHH-----HTCS
T ss_pred HHHHHcCCCEEEEcC------cc-----ccCHHHHHHH----HHhCC-CCcEEEcCCCC-HHHHHHHHH-----CCCC
Confidence 4577889999 8532 12 2233333322 22232 68889999996 789999999 6886
No 135
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=77.63 E-value=1.7 Score=33.23 Aligned_cols=66 Identities=9% Similarity=-0.065 Sum_probs=43.3
Q ss_pred hHHHhh-CCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFK-GSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~a-GadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.|.+. |+|+ -|..++...... ++...-+.+. .+..+-+=+-|||+|.+|+.++.+ + +
T Consensus 164 ~~A~~l~g~~iIGinnr~l~t~~~d-----~~~~~~l~~~-------ip~~~~vIaEsGI~t~edv~~~~~-----~-a- 224 (251)
T 1i4n_A 164 EKVFSVIRPKIIGINTRDLDTFEIK-----KNVLWELLPL-------VPDDTVVVAESGIKDPRELKDLRG-----K-V- 224 (251)
T ss_dssp HHHHTTCCCSEEEEECBCTTTCCBC-----TTHHHHHGGG-------SCTTSEEEEESCCCCGGGHHHHTT-----T-C-
T ss_pred HHHHhcCCCCEEEEeCcccccCCCC-----HHHHHHHHHh-------CCCCCEEEEeCCCCCHHHHHHHHH-----h-C-
Confidence 457788 9999 777666544444 5544433332 344444445789999999999988 4 4
Q ss_pred ccCCCceeEecc
Q psy969 82 WLNKDLFRIGAS 93 (106)
Q Consensus 82 w~~~~~~RiGtS 93 (106)
+.+-+|++
T Consensus 225 ----~avLVG~a 232 (251)
T 1i4n_A 225 ----NAVLVGTS 232 (251)
T ss_dssp ----SEEEECHH
T ss_pred ----CEEEEcHH
Confidence 46778876
No 136
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=76.96 E-value=1.7 Score=32.96 Aligned_cols=52 Identities=13% Similarity=0.068 Sum_probs=36.2
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
.+.|+++|||| -++. .+ ++.++..++ -|+..-=|+.|..++.+-++ +|+++
T Consensus 99 a~~Ai~AGA~fIvsP~------~~-----~~vi~~~~~------------~gi~~ipGv~TptEi~~A~~-----~Gad~ 150 (232)
T 4e38_A 99 ALAAKEAGATFVVSPG------FN-----PNTVRACQE------------IGIDIVPGVNNPSTVEAALE-----MGLTT 150 (232)
T ss_dssp HHHHHHHTCSEEECSS------CC-----HHHHHHHHH------------HTCEEECEECSHHHHHHHHH-----TTCCE
T ss_pred HHHHHHcCCCEEEeCC------CC-----HHHHHHHHH------------cCCCEEcCCCCHHHHHHHHH-----cCCCE
Confidence 57899999999 8542 34 444444221 23444347999999999999 79987
Q ss_pred c
Q psy969 83 L 83 (106)
Q Consensus 83 ~ 83 (106)
+
T Consensus 151 v 151 (232)
T 4e38_A 151 L 151 (232)
T ss_dssp E
T ss_pred E
Confidence 5
No 137
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=76.35 E-value=3.6 Score=34.04 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=45.5
Q ss_pred hHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 5 RKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 5 ~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
+.|.++|+|+ -|..++..-... ++...-+.+.+ +..+-+=+-|||+|.+|+.++.+ + +
T Consensus 171 ~~A~~lga~iIGinnr~L~t~~~d-----l~~~~~L~~~i-------p~~~~vIaEsGI~t~edv~~~~~-----~-a-- 230 (452)
T 1pii_A 171 ERAIALGAKVVGINNRDLRDLSID-----LNRTRELAPKL-------GHNVTVISESGINTYAQVRELSH-----F-A-- 230 (452)
T ss_dssp HHHHHTTCSEEEEESEETTTTEEC-----THHHHHHHHHH-------CTTSEEEEESCCCCHHHHHHHTT-----T-C--
T ss_pred HHHHHCCCCEEEEeCCCCCCCCCC-----HHHHHHHHHhC-------CCCCeEEEECCCCCHHHHHHHHH-----h-C--
Confidence 4578899999 777776544444 55555555443 44444556689999999999988 4 4
Q ss_pred cCCCceeEecc
Q psy969 83 LNKDLFRIGAS 93 (106)
Q Consensus 83 ~~~~~~RiGtS 93 (106)
+.+-+|++
T Consensus 231 ---~avLVGea 238 (452)
T 1pii_A 231 ---NGFLIGSA 238 (452)
T ss_dssp ---SEEEECHH
T ss_pred ---CEEEEcHH
Confidence 46788876
No 138
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=76.03 E-value=4.4 Score=32.90 Aligned_cols=61 Identities=21% Similarity=0.210 Sum_probs=37.7
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeec-CCCCCHHHHHHHHHHHHhhCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPA-GGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaa-GGIrt~~~a~~~i~l~~~~lGa 80 (106)
..+.++++|+|+ ---|.++ . ++.+..+.+.++ ...+++.. |.|.|.++|+.+++ +|+
T Consensus 148 ~~~~lveaGvdvIvldta~G----~-----~~~~~e~I~~ik-------~~~~i~Vi~g~V~t~e~A~~a~~-----aGA 206 (400)
T 3ffs_A 148 RAKLLVEAGVDVIVLDSAHG----H-----SLNIIRTLKEIK-------SKMNIDVIVGNVVTEEATKELIE-----NGA 206 (400)
T ss_dssp HHHHHHHHTCSEEEECCSCC----S-----BHHHHHHHHHHH-------TTCCCEEEEEEECSHHHHHHHHH-----TTC
T ss_pred HHHHHHHcCCCEEEEeCCCC----C-----cccHHHHHHHHH-------hcCCCeEEEeecCCHHHHHHHHH-----cCC
Confidence 467889999999 5323332 1 223222223332 11244443 68999999999999 799
Q ss_pred CccC
Q psy969 81 DWLN 84 (106)
Q Consensus 81 ~w~~ 84 (106)
|.+.
T Consensus 207 D~I~ 210 (400)
T 3ffs_A 207 DGIK 210 (400)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 8763
No 139
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=75.87 E-value=8.6 Score=29.98 Aligned_cols=49 Identities=14% Similarity=0.257 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 33 TCGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 33 ~~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.+...+.+++.++..++ .+.|.+-||. |.++|+++++..++ +|.+|+
T Consensus 180 ~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~-~~~~a~~~~~~l~~-~~i~~i 230 (392)
T 2poz_A 180 EAIELAYRRVKAVRDAAGPEIELMVDLSGGL-TTDETIRFCRKIGE-LDICFV 230 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEECTTCS-CHHHHHHHHHHHGG-GCEEEE
T ss_pred hhHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHHHHHHHHHHHh-cCCCEE
Confidence 3444444555555555554 5888998875 68999999988655 688887
No 140
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=75.72 E-value=6.1 Score=28.43 Aligned_cols=25 Identities=20% Similarity=0.202 Sum_probs=22.1
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=+.|||++.+++.++++ +|++
T Consensus 191 ~~pi~~~GGI~~~e~i~~~~~-----~Gad 215 (248)
T 1geq_A 191 RNKVAVGFGVSKREHVVSLLK-----EGAN 215 (248)
T ss_dssp SSCEEEESCCCSHHHHHHHHH-----TTCS
T ss_pred CCCEEEEeecCCHHHHHHHHH-----cCCC
Confidence 467889999999999999998 7986
No 141
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=74.16 E-value=7 Score=27.91 Aligned_cols=24 Identities=17% Similarity=0.303 Sum_probs=19.7
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=+.|||+ .+++.++++ +|++
T Consensus 179 ~~pi~v~GGI~-~~n~~~~~~-----aGad 202 (230)
T 1rpx_A 179 NPWIEVDGGVG-PKNAYKVIE-----AGAN 202 (230)
T ss_dssp CCEEEEESSCC-TTTHHHHHH-----HTCC
T ss_pred CceEEEECCCC-HHHHHHHHH-----cCCC
Confidence 56677899999 788888888 5886
No 142
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=74.08 E-value=13 Score=29.52 Aligned_cols=20 Identities=40% Similarity=0.581 Sum_probs=18.2
Q ss_pred ecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 57 PAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 57 aaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.|||.|+++|.++++ +|++
T Consensus 205 AnGGI~TpedA~~~le-----~GaD 224 (291)
T 3o07_A 205 AAGGVATPADAALLMQ-----LGCD 224 (291)
T ss_dssp BCSSCCSHHHHHHHHH-----TTCS
T ss_pred cCCCCCCHHHHHHHHH-----hCCC
Confidence 5799999999999998 7986
No 143
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=74.05 E-value=3 Score=31.41 Aligned_cols=62 Identities=13% Similarity=0.036 Sum_probs=36.0
Q ss_pred hHHHhhCCCc-ccCCCCCCC---CCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPD---STSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~---gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
+.+.+.|+|| .-+.=|.+. ++. +.....+.+.. +....++-|=+.||| +.+++.++++ +|+
T Consensus 149 ~~A~~~GaDyI~vgpvf~T~tK~~~~-----~~gl~~l~~~~----~~~~~~iPvvAiGGI-~~~ni~~~~~-----aGa 213 (243)
T 3o63_A 149 AAAAAGDADYFCVGPCWPTPTKPGRA-----APGLGLVRVAA----ELGGDDKPWFAIGGI-NAQRLPAVLD-----AGA 213 (243)
T ss_dssp HHHHHSSCSEEEECCSSCCCC----------CCCHHHHHHHH----TC---CCCEEEESSC-CTTTHHHHHH-----TTC
T ss_pred HHHhhCCCCEEEEcCccCCCCCCCcc-----hhhHHHHHHHH----HhccCCCCEEEecCC-CHHHHHHHHH-----cCC
Confidence 3466789999 765544211 111 12233333221 111235677788999 8999999999 798
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
+
T Consensus 214 ~ 214 (243)
T 3o63_A 214 R 214 (243)
T ss_dssp C
T ss_pred C
Confidence 6
No 144
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=73.91 E-value=10 Score=27.13 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=38.4
Q ss_pred hHHHhhCCCcccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 5 RKVAFKGSNFRTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 5 ~iai~aGadFKTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
+.+.++||||-|..+.. . .+.++...+.++++ +-+.++..- |+.|.+++.++.+ +|.++
T Consensus 77 ~~~~~aGad~i~vh~~~----~-----~~~~~~~~~~~~~~----g~~~~~d~l-~~~T~~~~~~~~~-----~g~d~ 135 (218)
T 3jr2_A 77 RMAFEAGADWITVSAAA----H-----IATIAACKKVADEL----NGEIQIEIY-GNWTMQDAKAWVD-----LGITQ 135 (218)
T ss_dssp HHHHHHTCSEEEEETTS----C-----HHHHHHHHHHHHHH----TCEEEEECC-SSCCHHHHHHHHH-----TTCCE
T ss_pred HHHHhcCCCEEEEecCC----C-----HHHHHHHHHHHHHh----CCccceeee-ecCCHHHHHHHHH-----cCccc
Confidence 56889999997777642 2 34455555555543 444554343 4678888888877 58875
No 145
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=73.32 E-value=1.3 Score=31.35 Aligned_cols=24 Identities=29% Similarity=0.565 Sum_probs=21.0
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=++|||+ .+++.++++ +|++
T Consensus 148 ~ipvia~GGI~-~~~i~~~~~-----~Ga~ 171 (212)
T 2v82_A 148 DIAVFAVGGVT-PENLAQWID-----AGCA 171 (212)
T ss_dssp TCEEEEESSCC-TTTHHHHHH-----HTCS
T ss_pred CCeEEEeCCCC-HHHHHHHHH-----cCCC
Confidence 58888999997 899999998 5886
No 146
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=72.93 E-value=5.7 Score=31.15 Aligned_cols=61 Identities=8% Similarity=0.001 Sum_probs=35.7
Q ss_pred hHHHhhCCCc-ccC-CC----CCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 5 RKVAFKGSNF-RTL-HG----RGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 5 ~iai~aGadF-KTS-TG----~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
+.+.++|+|+ -.. +. +.....+ .+++.-+++. .+-++-+ |||.|.++|..+++ +
T Consensus 172 ~~~~~agad~i~i~~~~~~~~~~~~~~~-----~~~i~~l~~~-------~~~pvi~---ggi~t~e~a~~~~~-----~ 231 (393)
T 2qr6_A 172 PIVIKAGADLLVIQGTLISAEHVNTGGE-----ALNLKEFIGS-------LDVPVIA---GGVNDYTTALHMMR-----T 231 (393)
T ss_dssp HHHHHTTCSEEEEECSSCCSSCCCC----------CHHHHHHH-------CSSCEEE---ECCCSHHHHHHHHT-----T
T ss_pred HHHHHCCCCEEEEeCCccccccCCCccc-----HHHHHHHHHh-------cCCCEEE---CCcCCHHHHHHHHH-----c
Confidence 3455789998 432 11 2111113 4455554443 3455665 79999999999998 7
Q ss_pred CCCccCC
Q psy969 79 GPDWLNK 85 (106)
Q Consensus 79 Ga~w~~~ 85 (106)
|++.+.-
T Consensus 232 Gad~i~v 238 (393)
T 2qr6_A 232 GAVGIIV 238 (393)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9986543
No 147
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=72.80 E-value=3.8 Score=29.45 Aligned_cols=24 Identities=21% Similarity=0.231 Sum_probs=19.8
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=+-|||++.+++..+++ +|++
T Consensus 76 ipv~v~ggI~~~~~~~~~l~-----~Gad 99 (244)
T 1vzw_A 76 IKVELSGGIRDDDTLAAALA-----TGCT 99 (244)
T ss_dssp SEEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred CcEEEECCcCCHHHHHHHHH-----cCCC
Confidence 44555699999999999999 7986
No 148
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=72.59 E-value=2.3 Score=31.60 Aligned_cols=52 Identities=13% Similarity=0.176 Sum_probs=31.7
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
..|.+.|+|| |- | |. .. .--...++ .++ +.. +.+-|=+.||| +.+.+.+|++
T Consensus 124 ~~A~~~Gad~vk~---F-pa-~~-----~gG~~~lk-~l~---~~~-~~ipvvaiGGI-~~~N~~~~l~ 176 (224)
T 1vhc_A 124 EIALEMGISAVKF---F-PA-EA-----SGGVKMIK-ALL---GPY-AQLQIMPTGGI-GLHNIRDYLA 176 (224)
T ss_dssp HHHHHTTCCEEEE---T-TT-TT-----TTHHHHHH-HHH---TTT-TTCEEEEBSSC-CTTTHHHHHT
T ss_pred HHHHHCCCCEEEE---e-eC-cc-----ccCHHHHH-HHH---hhC-CCCeEEEECCc-CHHHHHHHHh
Confidence 4577889999 86 4 31 11 11122222 222 112 36888999999 5688999998
No 149
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=72.48 E-value=23 Score=27.59 Aligned_cols=50 Identities=8% Similarity=-0.004 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 34 CGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
+++...+.+++.++..++ .+.|.+-||- |+++|+++++..++ +|.+|+ +|
T Consensus 197 ~~~~~~e~v~avR~a~G~d~~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~iE~P 249 (407)
T 2o56_A 197 ILRLGYDRMAAIRDAVGPDVDIIAEMHAFT-DTTSAIQFGRMIEE-LGIFYYEEP 249 (407)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEECTTCS-CHHHHHHHHHHHGG-GCCSCEECS
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHHHHHHHHHHHh-cCCCEEeCC
Confidence 445555555555555554 5889998775 79999999987655 699997 44
No 150
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=72.17 E-value=5.7 Score=33.06 Aligned_cols=64 Identities=17% Similarity=0.012 Sum_probs=38.9
Q ss_pred hhHHHhhCCCcccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNFRTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadFKTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.+.+.|+++-+-|+-...|.-.+ +=.+.++.+++. -++-|=+||||+|.+++.++++. .|++
T Consensus 458 a~~~~~~Ga~~il~t~~~~dG~~~G-~d~~li~~l~~~---------~~iPVIasGGi~s~~d~~~~~~~----~G~~ 521 (555)
T 1jvn_A 458 TRACEALGAGEILLNCIDKDGSNSG-YDLELIEHVKDA---------VKIPVIASSGAGVPEHFEEAFLK----TRAD 521 (555)
T ss_dssp HHHHHHTTCCEEEECCGGGTTTCSC-CCHHHHHHHHHH---------CSSCEEECSCCCSHHHHHHHHHH----SCCS
T ss_pred HHHHHHcCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHh---------CCccEEEECCCCCHHHHHHHHHh----cCCh
Confidence 3566788999833344322222111 104444444432 35678899999999999999974 5775
No 151
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=72.04 E-value=16 Score=29.16 Aligned_cols=79 Identities=11% Similarity=0.136 Sum_probs=50.3
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------CC----CCCCCCCCch-HHHHHHHHHHHHhhhcC-CceeEeecCCC-----C
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------PD----STSYGNVCNT-CGIIMCSAIKHFHKLSG-KKIGLKPAGGI-----S 62 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~~----gat~~~~~~~-~v~lm~~~i~~~~~~~~-~~vgiKaaGGI-----r 62 (106)
+++.|.++|.|. . -+.||- |. .-.||.. ++ ..+++++.+++.++.++ ..|+||.+.+- .
T Consensus 176 AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGs-lenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~ 254 (402)
T 2hsa_B 176 SALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGS-LANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAM 254 (402)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCC
T ss_pred HHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcC-hhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCC
Confidence 567888999999 5 344431 21 1112221 43 57888888888888776 48999998652 2
Q ss_pred ---CHHHHHHHHHHHHhhCC------CCcc
Q psy969 63 ---TFEDSVRWIYLVLIMLG------PDWL 83 (106)
Q Consensus 63 ---t~~~a~~~i~l~~~~lG------a~w~ 83 (106)
+.+++.++.+..++ +| .+|+
T Consensus 255 ~~~~~~~~~~la~~le~-~G~~gg~~vd~i 283 (402)
T 2hsa_B 255 DSNPLSLGLAVVERLNK-IQLHSGSKLAYL 283 (402)
T ss_dssp CSCHHHHHHHHHHHHHH-HHHHHTSCCSEE
T ss_pred CCCCHHHHHHHHHHHHh-cCCccCCceEEE
Confidence 45677777765544 47 7775
No 152
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=71.79 E-value=3.9 Score=32.93 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=37.6
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcC-CceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~-~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
+.+.++++|+|+ -..+.++...-. .+.++.++ +..+ -.+.+ |++.|.++|..+.+ +|+
T Consensus 241 ~a~~l~~aGvd~v~i~~~~G~~~~~-----~e~i~~i~-------~~~p~~pvi~---g~~~t~e~a~~l~~-----~G~ 300 (494)
T 1vrd_A 241 RVEKLVKAGVDVIVIDTAHGHSRRV-----IETLEMIK-------ADYPDLPVVA---GNVATPEGTEALIK-----AGA 300 (494)
T ss_dssp HHHHHHHTTCSEEEECCSCCSSHHH-----HHHHHHHH-------HHCTTSCEEE---EEECSHHHHHHHHH-----TTC
T ss_pred HHHHHHHhCCCEEEEEecCCchHHH-----HHHHHHHH-------HHCCCceEEe---CCcCCHHHHHHHHH-----cCC
Confidence 345678899999 765544311011 22233332 2232 34444 68999999999998 799
Q ss_pred CccC
Q psy969 81 DWLN 84 (106)
Q Consensus 81 ~w~~ 84 (106)
+++.
T Consensus 301 d~I~ 304 (494)
T 1vrd_A 301 DAVK 304 (494)
T ss_dssp SEEE
T ss_pred CEEE
Confidence 8653
No 153
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=71.22 E-value=9.6 Score=32.22 Aligned_cols=76 Identities=14% Similarity=0.165 Sum_probs=50.1
Q ss_pred hhhHHHhhCCCc-c--cCCCCC------CC----CCCCCCCCch-HHHHHHHHHHHHhhhcCC--ceeEeec-------C
Q psy969 3 RPRKVAFKGSNF-R--TLHGRG------PD----STSYGNVCNT-CGIIMCSAIKHFHKLSGK--KIGLKPA-------G 59 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~------~~----gat~~~~~~~-~v~lm~~~i~~~~~~~~~--~vgiKaa-------G 59 (106)
+++.|.++|.|. . -+.||- |. .-.||.. ++ ..+++++.+++.++.+++ .|+||.| |
T Consensus 154 aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs-~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~ 232 (729)
T 1o94_A 154 AAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGS-LENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPG 232 (729)
T ss_dssp HHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTT
T ss_pred HHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCC-HHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCC
Confidence 467888999998 3 456542 21 1112221 33 578888888888777853 5999997 5
Q ss_pred CCCCHHHHHHHHHHHHhhCCCC
Q psy969 60 GISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 60 GIrt~~~a~~~i~l~~~~lGa~ 81 (106)
|....+++.++.++.++ +++
T Consensus 233 G~~~~~~~~~~~~~l~~--~~d 252 (729)
T 1o94_A 233 QIEAEVDGQKFVEMADS--LVD 252 (729)
T ss_dssp SCCTTTHHHHHHHHHGG--GCS
T ss_pred CCCchHHHHHHHHHHHh--hcC
Confidence 77645788888888776 455
No 154
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=71.10 E-value=7.7 Score=29.27 Aligned_cols=40 Identities=20% Similarity=0.274 Sum_probs=27.1
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccchHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLNNILQEL 103 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~~~~l~~~l 103 (106)
.+-+=+-|||||.+|+.++++ |++ ..-+| |..+....+.|
T Consensus 190 ~~Pv~vGgGI~s~e~a~~~~~------gAd-----~VIVG-Sa~v~~~~~~~ 229 (234)
T 2f6u_A 190 KARLFYGGGIDSREKAREMLR------YAD-----TIIVG-NVIYEKGIDAF 229 (234)
T ss_dssp SSEEEEESCCCSHHHHHHHHH------HSS-----EEEEC-HHHHHHCHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHh------CCC-----EEEEC-hHHHhCHHHHH
Confidence 455667899999999999887 675 22334 34455555555
No 155
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=71.03 E-value=2.6 Score=30.98 Aligned_cols=52 Identities=19% Similarity=0.109 Sum_probs=31.8
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
..|.+.|+|| |- | |. .. .--...++ .++ +.. +.+-|=+.|||. .+.+.+|++
T Consensus 123 ~~A~~~Gad~v~~---F-pa-~~-----~gG~~~lk-~i~---~~~-~~ipvvaiGGI~-~~n~~~~l~ 175 (214)
T 1wbh_A 123 MLGMDYGLKEFKF---F-PA-EA-----NGGVKALQ-AIA---GPF-SQVRFCPTGGIS-PANYRDYLA 175 (214)
T ss_dssp HHHHHTTCCEEEE---T-TT-TT-----TTHHHHHH-HHH---TTC-TTCEEEEBSSCC-TTTHHHHHT
T ss_pred HHHHHCCCCEEEE---e-cC-cc-----ccCHHHHH-HHh---hhC-CCCeEEEECCCC-HHHHHHHHh
Confidence 4577889999 86 4 31 11 11122222 222 112 368888999995 689999998
No 156
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=70.43 E-value=15 Score=27.37 Aligned_cols=44 Identities=9% Similarity=0.017 Sum_probs=28.7
Q ss_pred HHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 38 MCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 38 m~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.+.+++.++..+..+.+|.+.++ +.++..++.+.+++ +|++++
T Consensus 146 ~~~iv~~vr~~~~~Pv~vKi~~~~-~~~~~~~~a~~~~~-~G~d~i 189 (311)
T 1jub_A 146 TEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQ-FPLTYV 189 (311)
T ss_dssp HHHHHHHHTTTCCSCEEEEECCCC-SHHHHHHHHHHHTT-SCCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHH-cCCcEE
Confidence 344444444445678999999887 77776665554433 588875
No 157
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=70.22 E-value=19 Score=26.75 Aligned_cols=24 Identities=21% Similarity=0.070 Sum_probs=19.7
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=+-|||+|.+++.+.+. .|+|
T Consensus 206 ~pi~vggGI~t~e~~~~~~~-----agAD 229 (268)
T 1qop_A 206 APALQGFGISSPEQVSAAVR-----AGAA 229 (268)
T ss_dssp CCEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred CcEEEECCCCCHHHHHHHHH-----cCCC
Confidence 44556899999999999887 6886
No 158
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=70.05 E-value=6.9 Score=29.44 Aligned_cols=22 Identities=23% Similarity=0.199 Sum_probs=20.1
Q ss_pred ceeEeecCCCCCHHHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIYL 73 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l 73 (106)
.+-|=++|||+|++|+.+++++
T Consensus 205 ~iPVIasGGi~s~ed~~~l~~~ 226 (260)
T 2agk_A 205 DLKIVYAGGAKSVDDLKLVDEL 226 (260)
T ss_dssp SCEEEEESCCCCTHHHHHHHHH
T ss_pred CceEEEeCCCCCHHHHHHHHHh
Confidence 5788899999999999999984
No 159
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=69.96 E-value=21 Score=27.95 Aligned_cols=48 Identities=17% Similarity=0.304 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 34 CGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.++...+.+++.++..++ .+.|.+-||. |.++|+++++..++ +|.+|+
T Consensus 192 ~~~~~~e~v~avRea~G~d~~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 241 (410)
T 2qq6_A 192 EHEAMVARVAAVREAVGPEVEVAIDMHGRF-DIPSSIRFARAMEP-FGLLWL 241 (410)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECTTCC-CHHHHHHHHHHHGG-GCCSEE
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHHHHHHHHHHhh-cCCCeE
Confidence 444444445455555554 5888998876 79999999987655 688887
No 160
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=69.91 E-value=6.8 Score=33.31 Aligned_cols=51 Identities=22% Similarity=0.126 Sum_probs=38.2
Q ss_pred ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEee-cCCCCCHHHHHHH
Q psy969 15 RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKP-AGGISTFEDSVRW 70 (106)
Q Consensus 15 KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKa-aGGIrt~~~a~~~ 70 (106)
-|.-||+...+| -+.+++|++++.+..+.+++.|-+-- +-|+--+|-|.-+
T Consensus 198 aT~eG~GGt~aT-----qenfR~mRkALD~v~~evgRyI~~~nY~SGlcmPEIA~m~ 249 (516)
T 1xrs_A 198 ATTEGFGGTYAT-----QENFRLMREALDKVGAEVGKYIRLCNYCSGLCMPEIAAMG 249 (516)
T ss_dssp CCSCCTTSCCCC-----HHHHHHHHHHHHHHHHHHTSCCEEEEECCSTTHHHHHHHH
T ss_pred CCCCCcCCchhh-----HHHHHHHHHHHHHHHHHhCCeeeeeccccccccHHHHHHH
Confidence 466677777788 88999999999988888888877642 3357666666544
No 161
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=69.24 E-value=17 Score=28.41 Aligned_cols=70 Identities=14% Similarity=0.087 Sum_probs=43.3
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCc-hHHHHHHHHHHHHhhhcCC--ceeEeecCCCC-CHHHHHHHHHHHHhhCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCN-TCGIIMCSAIKHFHKLSGK--KIGLKPAGGIS-TFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~-~~v~lm~~~i~~~~~~~~~--~vgiKaaGGIr-t~~~a~~~i~l~~~~lG 79 (106)
+.+.+.|.+. |--- .|.|.+ + +....+.+++ ++..++ .+.|++-||-+ |.++|+++++..++ +|
T Consensus 154 ~~~~~~Gf~~iKik~--spvG~~-----~~~~~~e~v~av---r~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~-~~ 222 (401)
T 2hzg_A 154 RAARRDGFAAVKFGW--GPIGRG-----TVAADADQIMAA---REGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDA-AG 222 (401)
T ss_dssp HHHHHTTCSEEEEES--TTTTSS-----CHHHHHHHHHHH---HHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHH-TT
T ss_pred HHHHHhCCCeEEEcC--CCCCCC-----HHHHHHHHHHHH---HHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHh-cC
Confidence 4456678887 7530 223334 5 3222222233 233443 68899999887 89999999888665 78
Q ss_pred CCcc-CC
Q psy969 80 PDWL-NK 85 (106)
Q Consensus 80 a~w~-~~ 85 (106)
.+|+ +|
T Consensus 223 i~~iEqP 229 (401)
T 2hzg_A 223 VLWLEEP 229 (401)
T ss_dssp CSEEECC
T ss_pred CCEEECC
Confidence 8887 44
No 162
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=68.72 E-value=11 Score=28.24 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=40.1
Q ss_pred hhHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.++++|++. -|.+. | .. .+.|+.|++. .+ .+-| -+|-|-|.+|+.+.++ +|++
T Consensus 31 a~al~~gGi~~iEvt~~t--~--~a-----~~~I~~l~~~-------~p-~~~I-GAGTVlt~~~a~~ai~-----AGA~ 87 (217)
T 3lab_A 31 AKALVAGGVHLLEVTLRT--E--AG-----LAAISAIKKA-------VP-EAIV-GAGTVCTADDFQKAID-----AGAQ 87 (217)
T ss_dssp HHHHHHTTCCEEEEETTS--T--TH-----HHHHHHHHHH-------CT-TSEE-EEECCCSHHHHHHHHH-----HTCS
T ss_pred HHHHHHcCCCEEEEeCCC--c--cH-----HHHHHHHHHH-------CC-CCeE-eeccccCHHHHHHHHH-----cCCC
Confidence 46778889988 56552 1 22 4566666543 22 2333 3499999999999999 6998
Q ss_pred cc-CCC
Q psy969 82 WL-NKD 86 (106)
Q Consensus 82 w~-~~~ 86 (106)
++ +|+
T Consensus 88 fivsP~ 93 (217)
T 3lab_A 88 FIVSPG 93 (217)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 63 555
No 163
>3iz6_S 40S ribosomal protein S19 (S19E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=68.44 E-value=2.4 Score=30.61 Aligned_cols=22 Identities=27% Similarity=0.385 Sum_probs=14.1
Q ss_pred CCCceeEeccchHHHHHHHHhh
Q psy969 84 NKDLFRIGASSLLNNILQELEA 105 (106)
Q Consensus 84 ~~~~~RiGtSs~~~~l~~~l~~ 105 (106)
.|..|+=|..+....++|+||.
T Consensus 91 ~P~h~~~asg~iiR~~LQqLE~ 112 (146)
T 3iz6_S 91 RPPHFCKSSGAISRNILQQLQK 112 (146)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHH
T ss_pred CCCcccCCCcHHHHHHHHHHHH
Confidence 4666666666666666666664
No 164
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=68.36 E-value=5 Score=31.80 Aligned_cols=62 Identities=19% Similarity=0.147 Sum_probs=37.0
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.++++|+|+ --.+..+ . ++.+.-+.+.++ +..+-++.+ |.+.|.++|+.+++ +|++
T Consensus 109 ~a~~l~eaGad~I~ld~a~G----~-----~~~~~~~i~~i~---~~~~~~Viv---g~v~t~e~A~~l~~-----aGaD 168 (361)
T 3khj_A 109 RAKLLVEAGVDVIVLDSAHG----H-----SLNIIRTLKEIK---SKMNIDVIV---GNVVTEEATKELIE-----NGAD 168 (361)
T ss_dssp HHHHHHHTTCSEEEECCSCC----S-----BHHHHHHHHHHH---HHCCCEEEE---EEECSHHHHHHHHH-----TTCS
T ss_pred HHHHHHHcCcCeEEEeCCCC----C-----cHHHHHHHHHHH---HhcCCcEEE---ccCCCHHHHHHHHH-----cCcC
Confidence 457789999999 5222221 1 222222222232 223333433 67899999999999 7998
Q ss_pred ccC
Q psy969 82 WLN 84 (106)
Q Consensus 82 w~~ 84 (106)
++.
T Consensus 169 ~I~ 171 (361)
T 3khj_A 169 GIK 171 (361)
T ss_dssp EEE
T ss_pred EEE
Confidence 763
No 165
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=68.12 E-value=13 Score=29.16 Aligned_cols=24 Identities=17% Similarity=0.160 Sum_probs=21.0
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=+.|||.|.+||...++ +|++
T Consensus 179 vPVI~~GGI~tpsDAa~Ame-----LGAd 202 (268)
T 2htm_A 179 PPVVVDAGLGLPSHAAEVME-----LGLD 202 (268)
T ss_dssp SCBEEESCCCSHHHHHHHHH-----TTCC
T ss_pred CeEEEeCCCCCHHHHHHHHH-----cCCC
Confidence 44556999999999999999 7996
No 166
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=67.61 E-value=5.2 Score=28.12 Aligned_cols=24 Identities=29% Similarity=0.535 Sum_probs=19.7
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=+.|||++.+++.++++ +|++
T Consensus 78 ipvi~~g~i~~~~~~~~~~~-----~Gad 101 (253)
T 1h5y_A 78 IPVLVGGGVRSLEDATTLFR-----AGAD 101 (253)
T ss_dssp SCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred CCEEEECCCCCHHHHHHHHH-----cCCC
Confidence 44446899999999999998 5886
No 167
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=67.59 E-value=7 Score=30.25 Aligned_cols=30 Identities=10% Similarity=0.187 Sum_probs=23.1
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|++-+|- |.++|+++++..++ +|.+|+
T Consensus 193 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 222 (371)
T 2ovl_A 193 PLMVDANMKW-TVDGAIRAARALAP-FDLHWI 222 (371)
T ss_dssp CEEEECTTCS-CHHHHHHHHHHHGG-GCCSEE
T ss_pred eEEEECCCCC-CHHHHHHHHHHHHh-cCCCEE
Confidence 5788888776 68888888887554 688887
No 168
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=67.43 E-value=7.9 Score=30.90 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=36.4
Q ss_pred hhhHHHhhCCCc-c--cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 3 RPRKVAFKGSNF-R--TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
+.+.++++|+|+ - |+.|. + ...++.+. .+++ ..+ .+-| ..|.|-|.++|+++++ +|
T Consensus 112 ~~~~lieaGvd~I~idta~G~-----~-----~~~~~~I~-~ik~---~~p-~v~V-i~G~v~t~e~A~~a~~-----aG 170 (366)
T 4fo4_A 112 RVKALVEAGVDVLLIDSSHGH-----S-----EGVLQRIR-ETRA---AYP-HLEI-IGGNVATAEGARALIE-----AG 170 (366)
T ss_dssp HHHHHHHTTCSEEEEECSCTT-----S-----HHHHHHHH-HHHH---HCT-TCEE-EEEEECSHHHHHHHHH-----HT
T ss_pred HHHHHHhCCCCEEEEeCCCCC-----C-----HHHHHHHH-HHHH---hcC-CCce-EeeeeCCHHHHHHHHH-----cC
Confidence 457889999999 4 44442 2 22233222 2222 222 2222 2366999999999999 69
Q ss_pred CCccC
Q psy969 80 PDWLN 84 (106)
Q Consensus 80 a~w~~ 84 (106)
+|++.
T Consensus 171 AD~I~ 175 (366)
T 4fo4_A 171 VSAVK 175 (366)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 98753
No 169
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=67.42 E-value=6.3 Score=30.03 Aligned_cols=46 Identities=15% Similarity=-0.020 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHhhhcCCceeEeecCCCCCH---HHHHHHHHHHHhhCCCCcc
Q psy969 33 TCGIIMCSAIKHFHKLSGKKIGLKPAGGISTF---EDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 33 ~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~---~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.+++.+.+++..+..+.+|.||.+.|+... +.|..+.+ +|++++
T Consensus 109 ~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~~~a~~l~~-----~G~d~i 157 (318)
T 1vhn_A 109 KDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVEEIYRILVE-----EGVDEV 157 (318)
T ss_dssp SCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHHHHHHHHHH-----TTCCEE
T ss_pred hCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHHHHHHHHHH-----hCCCEE
Confidence 35667777777777777889999999998653 44555555 798875
No 170
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=67.40 E-value=3.6 Score=30.54 Aligned_cols=25 Identities=20% Similarity=0.086 Sum_probs=21.7
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
-.+-|=+.|+|||.|++.+ ++ +|++
T Consensus 148 ~~~PiIaGGlI~t~edv~~-l~-----aGA~ 172 (188)
T 1vkf_A 148 PGRTVIAAGLVETEEEARE-IL-----KHVS 172 (188)
T ss_dssp TTSEEEEESCCCSHHHHHH-HT-----TTSS
T ss_pred cCCCEEEECCcCCHHHHHH-HH-----CCCe
Confidence 3567789999999999999 98 7996
No 171
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=67.27 E-value=17 Score=28.38 Aligned_cols=50 Identities=6% Similarity=-0.066 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 34 CGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
.++...+.+++.++..++ .+.|.+-||. |.++|+++++..++ +|.+|+ +|
T Consensus 200 ~~~~~~e~v~avR~a~G~d~~l~vDan~~~-~~~~ai~~~~~l~~-~~i~~iE~P 252 (410)
T 2gl5_A 200 QLKMGEARIAAMREAMGDDADIIVEIHSLL-GTNSAIQFAKAIEK-YRIFLYEEP 252 (410)
T ss_dssp HHHHHHHHHHHHHHHHCSSSEEEEECTTCS-CHHHHHHHHHHHGG-GCEEEEECS
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEECCCCC-CHHHHHHHHHHHHh-cCCCeEECC
Confidence 444445555555555654 5888998876 68999999988655 688887 44
No 172
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=67.06 E-value=7 Score=29.36 Aligned_cols=69 Identities=14% Similarity=-0.067 Sum_probs=41.9
Q ss_pred hHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 5 RKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 5 ~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
+.+.+.|+|+ -+.-.+...+.. ++..+-+++.+... +..+-+=+.|||+|.+++.++.+ |++
T Consensus 168 ~~a~~~gad~IGvn~~~l~~~~~d-----l~~~~~L~~~i~~~----~~~~~vIAegGI~s~~dv~~l~~------Ga~- 231 (254)
T 1vc4_A 168 EIALEAGAEVLGINNRDLATLHIN-----LETAPRLGRLARKR----GFGGVLVAESGYSRKEELKALEG------LFD- 231 (254)
T ss_dssp HHHHHHTCSEEEEESBCTTTCCBC-----TTHHHHHHHHHHHT----TCCSEEEEESCCCSHHHHHTTTT------TCS-
T ss_pred HHHHHcCCCEEEEccccCcCCCCC-----HHHHHHHHHhCccc----cCCCeEEEEcCCCCHHHHHHHHc------CCC-
Confidence 3577889998 444443333444 55555555544210 11445667899999999998875 653
Q ss_pred cCCCceeEecc
Q psy969 83 LNKDLFRIGAS 93 (106)
Q Consensus 83 ~~~~~~RiGtS 93 (106)
.+-+|++
T Consensus 232 ----gvlVGsA 238 (254)
T 1vc4_A 232 ----AVLIGTS 238 (254)
T ss_dssp ----EEEECHH
T ss_pred ----EEEEeHH
Confidence 4566654
No 173
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=66.61 E-value=7.8 Score=30.86 Aligned_cols=39 Identities=15% Similarity=0.128 Sum_probs=30.1
Q ss_pred HHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCC
Q psy969 42 IKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNK 85 (106)
Q Consensus 42 i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~ 85 (106)
|++..+..+.+|.+|-.|+.-+.++|..+.+ +|+++++-
T Consensus 179 i~~i~~~~~vPVivK~vG~g~s~~~A~~l~~-----aGad~I~V 217 (368)
T 3vkj_A 179 LRDISKELSVPIIVKESGNGISMETAKLLYS-----YGIKNFDT 217 (368)
T ss_dssp HHHHHTTCSSCEEEECSSSCCCHHHHHHHHH-----TTCCEEEC
T ss_pred HHHHHHHcCCCEEEEeCCCCCCHHHHHHHHh-----CCCCEEEE
Confidence 3334445678999997776679999999999 79987644
No 174
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=66.58 E-value=23 Score=26.42 Aligned_cols=60 Identities=18% Similarity=0.082 Sum_probs=44.1
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccch
Q psy969 17 LHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 95 (106)
Q Consensus 17 STG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~ 95 (106)
.||.....++ +++++.+.+.++++ .+.+-|=.-|||++.+++..+.. .|. +.+-||.+++
T Consensus 150 GtG~~v~t~~-----~d~~~~~~~~ir~~----~~~~~ilyggsV~~~n~~~~~~~-----~~v-----DG~LVG~a~l 209 (225)
T 1hg3_A 150 GTGIPVSKAK-----PEVITNTVELVKKV----NPEVKVLCGAGISTGEDVKKAIE-----LGT-----VGVLLASGVT 209 (225)
T ss_dssp TTSCCTTTSC-----THHHHHHHHHHHHH----CTTSEEEEESSCCSHHHHHHHHH-----TTC-----SEEEESHHHH
T ss_pred ccCCCCCCCC-----hhHHHHHHHHHHhc----cCCCEEEEeCCCCcHHHHHHHHh-----CCC-----CEEEeCHHHH
Confidence 4553323577 88899988888765 45666667789999999999988 566 4678888754
No 175
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=66.57 E-value=11 Score=29.21 Aligned_cols=36 Identities=22% Similarity=0.130 Sum_probs=26.6
Q ss_pred cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccc
Q psy969 49 SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS 94 (106)
Q Consensus 49 ~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs 94 (106)
.+..+-+=+-+||+|.+|+..+.+ .|+ +.|-||.+-
T Consensus 201 ip~~~~~VsESGI~t~~dv~~l~~-----~G~-----~a~LVGeal 236 (258)
T 4a29_A 201 IPSNVVKVAKLGISERNEIEELRK-----LGV-----NAFLISSSL 236 (258)
T ss_dssp SCTTSEEEEEESSCCHHHHHHHHH-----TTC-----CEEEECHHH
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHH-----CCC-----CEEEECHHH
Confidence 344443334478999999999999 787 478899863
No 176
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=66.25 E-value=11 Score=27.06 Aligned_cols=24 Identities=38% Similarity=0.612 Sum_probs=20.1
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=+.|||++.+++.++++ +|++
T Consensus 75 ipvi~~ggI~~~~~~~~~~~-----~Gad 98 (253)
T 1thf_D 75 IPFTVGGGIHDFETASELIL-----RGAD 98 (253)
T ss_dssp SCEEEESSCCSHHHHHHHHH-----TTCS
T ss_pred CCEEEeCCCCCHHHHHHHHH-----cCCC
Confidence 44556799999999999998 6986
No 177
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=66.06 E-value=6.2 Score=29.22 Aligned_cols=53 Identities=26% Similarity=0.186 Sum_probs=32.9
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..++|+++|||| -++ + .+ ++ +...++. .+.. +-+ |+.|.+++.+-.+ +|++
T Consensus 90 ~~~~A~~aGAd~v~~p-~-----~d-----~~-v~~~~~~-------~g~~--~i~--G~~t~~e~~~A~~-----~Gad 141 (225)
T 1mxs_A 90 MFAAVEAAGAQFVVTP-G-----IT-----ED-ILEAGVD-------SEIP--LLP--GISTPSEIMMGYA-----LGYR 141 (225)
T ss_dssp HHHHHHHHTCSSEECS-S-----CC-----HH-HHHHHHH-------CSSC--EEC--EECSHHHHHHHHT-----TTCC
T ss_pred HHHHHHHCCCCEEEeC-C-----CC-----HH-HHHHHHH-------hCCC--EEE--eeCCHHHHHHHHH-----CCCC
Confidence 467899999999 632 2 23 33 2222211 1222 222 5999999998888 7998
Q ss_pred cc
Q psy969 82 WL 83 (106)
Q Consensus 82 w~ 83 (106)
++
T Consensus 142 ~v 143 (225)
T 1mxs_A 142 RF 143 (225)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 178
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=65.57 E-value=4.4 Score=29.14 Aligned_cols=25 Identities=32% Similarity=0.577 Sum_probs=20.5
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=+.|||++.+++.++++ +|++
T Consensus 75 ~iPvi~~Ggi~~~~~~~~~~~-----~Gad 99 (252)
T 1ka9_F 75 FIPLTVGGGVRSLEDARKLLL-----SGAD 99 (252)
T ss_dssp CSCEEEESSCCSHHHHHHHHH-----HTCS
T ss_pred CCCEEEECCcCCHHHHHHHHH-----cCCC
Confidence 355556799999999999999 5886
No 179
>3u5c_T 40S ribosomal protein S19-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_S 3o30_M 3o2z_M 3u5g_T 3jyv_T*
Probab=64.93 E-value=4.2 Score=29.26 Aligned_cols=15 Identities=13% Similarity=0.202 Sum_probs=12.3
Q ss_pred CCc-ccCCCCCCCCCC
Q psy969 12 SNF-RTLHGRGPDSTS 26 (106)
Q Consensus 12 adF-KTSTG~~~~gat 26 (106)
+|| ||++++.-.+-+
T Consensus 34 ~d~vKTg~~kEl~P~d 49 (144)
T 3u5c_T 34 VDIVKTSSGNEMPPQD 49 (144)
T ss_dssp TTSCCSCTTCSSCCSS
T ss_pred HhHhhccccccCCCCC
Confidence 799 999999866665
No 180
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=64.21 E-value=14 Score=27.32 Aligned_cols=59 Identities=17% Similarity=0.144 Sum_probs=38.4
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
.+.+.++|||+ -..+.... + ++.++-+.+.+++ .|+.....++|.+++.+..+ +|+++
T Consensus 94 i~~~~~~Gad~V~l~~~~~~---~-----p~~l~~~i~~~~~--------~g~~v~~~v~t~eea~~a~~-----~Gad~ 152 (232)
T 3igs_A 94 VDALAQAGAAIIAVDGTARQ---R-----PVAVEALLARIHH--------HHLLTMADCSSVDDGLACQR-----LGADI 152 (232)
T ss_dssp HHHHHHHTCSEEEEECCSSC---C-----SSCHHHHHHHHHH--------TTCEEEEECCSHHHHHHHHH-----TTCSE
T ss_pred HHHHHHcCCCEEEECccccC---C-----HHHHHHHHHHHHH--------CCCEEEEeCCCHHHHHHHHh-----CCCCE
Confidence 35688999999 65554321 2 3334444444332 14555567999999999998 79987
Q ss_pred c
Q psy969 83 L 83 (106)
Q Consensus 83 ~ 83 (106)
+
T Consensus 153 I 153 (232)
T 3igs_A 153 I 153 (232)
T ss_dssp E
T ss_pred E
Confidence 6
No 181
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=63.89 E-value=5.7 Score=30.70 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=21.2
Q ss_pred cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 49 SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 49 ~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+..+-+| |.|.+.++|+.+++ +|++.+
T Consensus 147 ~~~~~vi~--G~v~s~e~A~~a~~-----aGad~I 174 (336)
T 1ypf_A 147 LPESFVIA--GNVGTPEAVRELEN-----AGADAT 174 (336)
T ss_dssp CTTSEEEE--EEECSHHHHHHHHH-----HTCSEE
T ss_pred CCCCEEEE--CCcCCHHHHHHHHH-----cCCCEE
Confidence 44444454 56999999999999 699865
No 182
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=62.81 E-value=8.8 Score=29.40 Aligned_cols=30 Identities=10% Similarity=0.199 Sum_probs=23.3
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|++-||- |.++++++++..++ +|.+|+
T Consensus 191 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 220 (359)
T 1mdl_A 191 GIMVDYNQSL-DVPAAIKRSQALQQ-EGVTWI 220 (359)
T ss_dssp EEEEECTTCS-CHHHHHHHHHHHHH-HTCSCE
T ss_pred EEEEECCCCC-CHHHHHHHHHHHHH-hCCCeE
Confidence 5788888776 68888888887655 588887
No 183
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=61.96 E-value=27 Score=27.33 Aligned_cols=20 Identities=25% Similarity=0.135 Sum_probs=18.0
Q ss_pred eeEeecCCCCCHHHHHHHHH
Q psy969 53 IGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~ 72 (106)
+-|=+.|||+|.++|.++++
T Consensus 278 iPVi~~Ggi~t~e~Ae~~l~ 297 (343)
T 3kru_A 278 IKTSAVGLITTQELAEEILS 297 (343)
T ss_dssp CEEEEESSCCCHHHHHHHHH
T ss_pred cccceeeeeeHHHHHHHHHh
Confidence 55678899999999999999
No 184
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=61.83 E-value=15 Score=29.50 Aligned_cols=21 Identities=38% Similarity=0.551 Sum_probs=18.9
Q ss_pred eecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 56 KPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 56 KaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
=+.|||.|.+++.++++ +|++
T Consensus 246 VAeGGI~Tpeda~~~l~-----~GaD 266 (330)
T 2yzr_A 246 FAAGGVATPADAALMMQ-----LGSD 266 (330)
T ss_dssp EECSCCCSHHHHHHHHH-----TTCS
T ss_pred EEECCCCCHHHHHHHHH-----cCcC
Confidence 37899999999999999 7985
No 185
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=61.83 E-value=4.5 Score=30.67 Aligned_cols=50 Identities=12% Similarity=0.026 Sum_probs=33.9
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEe
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 91 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiG 91 (106)
++.++.+++.+.+ .+..+-|=+.|||+ .+.+.++++ +|++.+=.+..-++
T Consensus 179 l~KI~~lr~~~~~----~~~~~~I~VDGGI~-~~ti~~~~~-----aGAD~~V~GSaIf~ 228 (246)
T 3inp_A 179 LDKAKEISKWISS----TDRDILLEIDGGVN-PYNIAEIAV-----CGVNAFVAGSAIFN 228 (246)
T ss_dssp HHHHHHHHHHHHH----HTSCCEEEEESSCC-TTTHHHHHT-----TTCCEEEESHHHHT
T ss_pred HHHHHHHHHHHHh----cCCCeeEEEECCcC-HHHHHHHHH-----cCCCEEEEehHHhC
Confidence 5556666655543 25568899999999 688999998 79974433333333
No 186
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=61.63 E-value=22 Score=30.50 Aligned_cols=69 Identities=19% Similarity=0.213 Sum_probs=43.3
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCC-----CCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSY-----GNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~-----~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
++-.+++|||+ |-.-|=+..-+|. +-|=..+|....++.+++ .+-|=|=||||+.-|...-+.
T Consensus 336 a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~------~vpvIADGGI~~sGDi~KAla----- 404 (556)
T 4af0_A 336 AAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRF------GIPCIADGGIGNIGHIAKALA----- 404 (556)
T ss_dssp HHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGG------TCCEEEESCCCSHHHHHHHHH-----
T ss_pred HHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHc------CCCEEecCCcCcchHHHHHhh-----
Confidence 45678999999 9766633221221 112123444444443322 366888999999999999888
Q ss_pred CCCCcc
Q psy969 78 LGPDWL 83 (106)
Q Consensus 78 lGa~w~ 83 (106)
+|++.+
T Consensus 405 aGAd~V 410 (556)
T 4af0_A 405 LGASAV 410 (556)
T ss_dssp TTCSEE
T ss_pred cCCCEE
Confidence 798743
No 187
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=61.24 E-value=29 Score=25.93 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=39.6
Q ss_pred hHHHhhCCCcccC-CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNFRTL-HGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadFKTS-TG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+|.++||+|-.+ -|... ... .+-+.++.+ |.++++..+-+..|-+|. +|+..+..+... +|++
T Consensus 117 ~~Aa~AGa~yISPfvgRi~-d~~-----~dG~~~v~~-i~~~~~~~~~~t~ilaAS-~R~~~~v~~~a~-----~G~d 181 (212)
T 3r8r_A 117 LLAARAGATYVSPFLGRLD-DIG-----HNGLDLISE-VKQIFDIHGLDTQIIAAS-IRHPQHVTEAAL-----RGAH 181 (212)
T ss_dssp HHHHHHTCSEEEEBHHHHH-HTT-----SCHHHHHHH-HHHHHHHHTCCCEEEEBS-CCSHHHHHHHHH-----TTCS
T ss_pred HHHHHcCCeEEEeccchhh-hcC-----CChHHHHHH-HHHHHHHcCCCCEEEEec-CCCHHHHHHHHH-----cCCC
Confidence 4678899988433 22110 001 112333332 334455557789999874 999999999887 7997
No 188
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=61.12 E-value=11 Score=27.93 Aligned_cols=25 Identities=28% Similarity=0.170 Sum_probs=21.8
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=+.|+|||.||+.+.++ +|++
T Consensus 150 ~~PiIaGGlI~~~edv~~al~-----aGA~ 174 (192)
T 3kts_A 150 HIPVIAGGLIETSEQVNQVIA-----SGAI 174 (192)
T ss_dssp CCCEEEESSCCSHHHHHHHHT-----TTEE
T ss_pred CCCEEEECCcCCHHHHHHHHH-----cCCe
Confidence 356778999999999999999 7985
No 189
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=61.02 E-value=9.3 Score=29.74 Aligned_cols=76 Identities=20% Similarity=0.276 Sum_probs=37.9
Q ss_pred hhHHHhhCCCc-c-cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-R-TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-K-TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+..|+++|++. - |-.|++ +. .||++.|++-.+++... +..|+.. ||. ++...+.-+.+++++|..
T Consensus 216 ~laA~~aGa~~vd~tv~GlG--er-~GN~~lE~vv~~L~~~~-------~~~g~~t--gid-l~~L~~~s~~v~~~~g~~ 282 (325)
T 3eeg_A 216 SLAALQNGARQVECTINGIG--ER-AGNTALEEVVMAMECHK-------ETLGLET--GIN-HKKLVPISHLVSTLMRMQ 282 (325)
T ss_dssp HHHHHHHTCCEEEEBGGGCC--ST-TCCCBHHHHHHHHHHTH-------HHHCEEC--CCC-GGGHHHHHHHHHHHTTC-
T ss_pred HHHHHHhCCCEEEEeccccc--cc-ccchhHHHHHHHHHhhh-------hccCCCC--CcC-HHHHHHHHHHHHHHhCCC
Confidence 35688999999 4 445554 33 37888999888875421 1234544 342 233333344445668876
Q ss_pred ccCCCceeEecc
Q psy969 82 WLNKDLFRIGAS 93 (106)
Q Consensus 82 w~~~~~~RiGtS 93 (106)
+.|+.-.+|.+
T Consensus 283 -~~~~~p~vG~~ 293 (325)
T 3eeg_A 283 -VQSNKAIVGRN 293 (325)
T ss_dssp ------------
T ss_pred -CCCCCCccchh
Confidence 67777777764
No 190
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=60.85 E-value=25 Score=27.22 Aligned_cols=31 Identities=10% Similarity=0.231 Sum_probs=19.8
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
-.+.|++-||- |.++++++++..++ +|.+|+
T Consensus 191 ~~l~vD~n~~~-~~~~a~~~~~~l~~-~~i~~i 221 (384)
T 2pgw_A 191 ARLRLDANEGW-SVHDAINMCRKLEK-YDIEFI 221 (384)
T ss_dssp CEEEEECTTCC-CHHHHHHHHHHHGG-GCCSEE
T ss_pred cEEEEecCCCC-CHHHHHHHHHHHHh-cCCCEE
Confidence 34666766665 57777777765544 467776
No 191
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=60.29 E-value=15 Score=30.00 Aligned_cols=60 Identities=22% Similarity=0.166 Sum_probs=36.3
Q ss_pred hhhHHHhhCCCc-c--cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCC-ceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 3 RPRKVAFKGSNF-R--TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGK-KIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~-~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
+.+.++++|+|+ - |+.|+ + ....+.+ +.++ +..++ .+.+ |.|.|.++|.++++ +
T Consensus 233 ~a~~l~~aG~d~I~id~a~g~-----~-----~~~~~~v-~~i~---~~~p~~~Vi~---g~v~t~e~a~~l~~-----a 290 (490)
T 4avf_A 233 RVAALVAAGVDVVVVDTAHGH-----S-----KGVIERV-RWVK---QTFPDVQVIG---GNIATAEAAKALAE-----A 290 (490)
T ss_dssp HHHHHHHTTCSEEEEECSCCS-----B-----HHHHHHH-HHHH---HHCTTSEEEE---EEECSHHHHHHHHH-----T
T ss_pred HHHHHhhcccceEEecccCCc-----c-----hhHHHHH-HHHH---HHCCCceEEE---eeeCcHHHHHHHHH-----c
Confidence 456778899999 4 45443 1 2222222 2222 22322 3333 67999999999999 7
Q ss_pred CCCccC
Q psy969 79 GPDWLN 84 (106)
Q Consensus 79 Ga~w~~ 84 (106)
|++++.
T Consensus 291 GaD~I~ 296 (490)
T 4avf_A 291 GADAVK 296 (490)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 998653
No 192
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=60.17 E-value=7.7 Score=30.22 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=41.1
Q ss_pred hhHHHhhCCCc-ccC-CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTL-HGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTS-TG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+..|+++||+. -+| .|++ +. .||++.|++-.+++.. .|+.. || +++...+.-+.+++++|..
T Consensus 231 ~laAv~aGa~~vd~tv~GlG--~~-aGN~~~E~lv~~L~~~----------~g~~t--gi-dl~~L~~~~~~v~~~~~~~ 294 (337)
T 3ble_A 231 SLQAIRAGVKGLHASINGLG--ER-AGNTPLEALVTTIHDK----------SNSKT--NI-NEIAITEASRLVEVFSGKR 294 (337)
T ss_dssp HHHHHHTTCSEEEEBGGGCS--ST-TCBCBHHHHHHHHHHH----------SSCCC--CC-CGGGHHHHHHHHHHHHCCC
T ss_pred HHHHHHhCCCEEEEeccccc--cc-ccchhHHHHHHHHHHh----------cCCCC--Cc-CHHHHHHHHHHHHHHHCCC
Confidence 35789999999 555 5554 23 4788899988877542 12322 33 2334444444444556753
Q ss_pred ccCCCceeEec
Q psy969 82 WLNKDLFRIGA 92 (106)
Q Consensus 82 w~~~~~~RiGt 92 (106)
+.++.-.+|.
T Consensus 295 -~~~~~~~vg~ 304 (337)
T 3ble_A 295 -ISANRPIVGE 304 (337)
T ss_dssp -CCTTCTTTST
T ss_pred -CCCCccchhh
Confidence 4444444454
No 193
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=60.06 E-value=47 Score=25.76 Aligned_cols=48 Identities=8% Similarity=0.078 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 34 CGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+++...+.++..++..++ .+.|.+-||. |.++|+++++..++ +|.+|+
T Consensus 191 ~~~~~~e~v~avr~avG~d~~l~vDan~~~-~~~~ai~~~~~l~~-~~i~~i 240 (403)
T 2ox4_A 191 TIKIGVERVEAIRNAVGPDVDIIVENHGHT-DLVSAIQFAKAIEE-FNIFFY 240 (403)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEECTTCS-CHHHHHHHHHHHGG-GCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEECCCCC-CHHHHHHHHHHHHh-hCCCEE
Confidence 445445555555555554 5888998876 78999999987655 688887
No 194
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=60.03 E-value=7.8 Score=30.52 Aligned_cols=61 Identities=21% Similarity=0.176 Sum_probs=36.2
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhc-CCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLS-GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~-~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.++++|+|+ --.++.+ . ++....+.+.++ +.. +-++.+ |++.+.++|..+.+ +|++
T Consensus 158 a~~~~~~G~d~i~i~~~~g----~-----~~~~~e~i~~ir---~~~~~~pviv---~~v~~~~~a~~a~~-----~Gad 217 (404)
T 1eep_A 158 VEELVKAHVDILVIDSAHG----H-----STRIIELIKKIK---TKYPNLDLIA---GNIVTKEAALDLIS-----VGAD 217 (404)
T ss_dssp HHHHHHTTCSEEEECCSCC----S-----SHHHHHHHHHHH---HHCTTCEEEE---EEECSHHHHHHHHT-----TTCS
T ss_pred HHHHHHCCCCEEEEeCCCC----C-----hHHHHHHHHHHH---HHCCCCeEEE---cCCCcHHHHHHHHh-----cCCC
Confidence 34677889999 5333221 2 322222223333 334 334544 68999999999998 7998
Q ss_pred ccC
Q psy969 82 WLN 84 (106)
Q Consensus 82 w~~ 84 (106)
++.
T Consensus 218 ~I~ 220 (404)
T 1eep_A 218 CLK 220 (404)
T ss_dssp EEE
T ss_pred EEE
Confidence 753
No 195
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=60.01 E-value=16 Score=29.74 Aligned_cols=81 Identities=17% Similarity=0.309 Sum_probs=48.7
Q ss_pred hhhHHHhhCCCc---ccCCCCC------C----CCCCCCCCCch-HHHHHHHHHHHHhhhcCC-ceeEeecC-----CCC
Q psy969 3 RPRKVAFKGSNF---RTLHGRG------P----DSTSYGNVCNT-CGIIMCSAIKHFHKLSGK-KIGLKPAG-----GIS 62 (106)
Q Consensus 3 ~~~iai~aGadF---KTSTG~~------~----~gat~~~~~~~-~v~lm~~~i~~~~~~~~~-~vgiKaaG-----GIr 62 (106)
+++.|.++|.|. --..||- | ..-.||.. ++ ..+++++.+++.++.++. .|+||.+. |+.
T Consensus 173 aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs-~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~ 251 (407)
T 3tjl_A 173 AAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGS-IENRARLILELIDHLSTIVGADKIGIRISPWATFQNMK 251 (407)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSS-HHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCC
T ss_pred HHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCC-hhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCc
Confidence 567888999998 3445531 2 11112221 44 588888888888777763 79999985 333
Q ss_pred C-------HHHHHHHHHHHH--hhCC--CCccC
Q psy969 63 T-------FEDSVRWIYLVL--IMLG--PDWLN 84 (106)
Q Consensus 63 t-------~~~a~~~i~l~~--~~lG--a~w~~ 84 (106)
. .++..++++..+ .-+| .+||+
T Consensus 252 ~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylh 284 (407)
T 3tjl_A 252 AHKDTVHPLTTFSYLVHELQQRADKGQGIAYIS 284 (407)
T ss_dssp GGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEE
T ss_pred ccccccccHHHHHHHHHHHHhHhhcCCceeEEE
Confidence 2 445555555441 2257 77763
No 196
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=59.45 E-value=10 Score=27.07 Aligned_cols=32 Identities=16% Similarity=0.084 Sum_probs=25.0
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccchH
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLL 96 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~~ 96 (106)
++-|=+.|||. .+.+.++++ +|++ -++.+|.+
T Consensus 144 ~iPviaiGGI~-~~nv~~~~~-----~Ga~-------gVav~s~i 175 (210)
T 3ceu_A 144 DSKVMALGGIN-EDNLLEIKD-----FGFG-------GAVVLGDL 175 (210)
T ss_dssp STTEEEESSCC-TTTHHHHHH-----TTCS-------EEEESHHH
T ss_pred CCCEEEECCCC-HHHHHHHHH-----hCCC-------EEEEhHHh
Confidence 56678899998 888889988 7985 66666654
No 197
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=59.32 E-value=16 Score=26.96 Aligned_cols=59 Identities=14% Similarity=0.084 Sum_probs=38.2
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
.+.+.++|||+ -.-+.... + ++.+..+.+.+++ .|+.+-..++|.+++++..+ +|+++
T Consensus 94 i~~~~~aGad~I~l~~~~~~---~-----p~~l~~~i~~~~~--------~g~~v~~~v~t~eea~~a~~-----~Gad~ 152 (229)
T 3q58_A 94 VDALAQAGADIIAFDASFRS---R-----PVDIDSLLTRIRL--------HGLLAMADCSTVNEGISCHQ-----KGIEF 152 (229)
T ss_dssp HHHHHHHTCSEEEEECCSSC---C-----SSCHHHHHHHHHH--------TTCEEEEECSSHHHHHHHHH-----TTCSE
T ss_pred HHHHHHcCCCEEEECccccC---C-----hHHHHHHHHHHHH--------CCCEEEEecCCHHHHHHHHh-----CCCCE
Confidence 35688999999 55443321 2 3333344444332 25555568999999999999 79987
Q ss_pred c
Q psy969 83 L 83 (106)
Q Consensus 83 ~ 83 (106)
+
T Consensus 153 I 153 (229)
T 3q58_A 153 I 153 (229)
T ss_dssp E
T ss_pred E
Confidence 6
No 198
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=58.68 E-value=9.5 Score=30.54 Aligned_cols=60 Identities=18% Similarity=0.272 Sum_probs=36.6
Q ss_pred hhhHHHhhCCCc-c--cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcC-CceeEeecCCCCCHHHHHHHHHHHHhhC
Q psy969 3 RPRKVAFKGSNF-R--TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSG-KKIGLKPAGGISTFEDSVRWIYLVLIML 78 (106)
Q Consensus 3 ~~~iai~aGadF-K--TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~-~~vgiKaaGGIrt~~~a~~~i~l~~~~l 78 (106)
+.+.++++|+|+ - |+.|+ .+.+.-+.+.+++ ..+ -.|.. |+|-|.++|+.+++ +
T Consensus 104 ~~~~a~~aGvdvI~id~a~G~-----------~~~~~e~I~~ir~---~~~~~~Vi~---G~V~T~e~A~~a~~-----a 161 (361)
T 3r2g_A 104 RAEALRDAGADFFCVDVAHAH-----------AKYVGKTLKSLRQ---LLGSRCIMA---GNVATYAGADYLAS-----C 161 (361)
T ss_dssp HHHHHHHTTCCEEEEECSCCS-----------SHHHHHHHHHHHH---HHTTCEEEE---EEECSHHHHHHHHH-----T
T ss_pred HHHHHHHcCCCEEEEeCCCCC-----------cHhHHHHHHHHHH---hcCCCeEEE---cCcCCHHHHHHHHH-----c
Confidence 456788999999 4 34553 1222222223332 222 23333 46999999999999 7
Q ss_pred CCCccC
Q psy969 79 GPDWLN 84 (106)
Q Consensus 79 Ga~w~~ 84 (106)
|+|.+.
T Consensus 162 GaD~I~ 167 (361)
T 3r2g_A 162 GADIIK 167 (361)
T ss_dssp TCSEEE
T ss_pred CCCEEE
Confidence 999764
No 199
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=58.59 E-value=12 Score=29.18 Aligned_cols=30 Identities=7% Similarity=0.065 Sum_probs=22.6
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-||- |.++|+++++..++ +|.+|+
T Consensus 209 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 238 (393)
T 2og9_A 209 PLMVDANQQW-DRPTAQRMCRIFEP-FNLVWI 238 (393)
T ss_dssp CEEEECTTCC-CHHHHHHHHHHHGG-GCCSCE
T ss_pred EEEEECCCCC-CHHHHHHHHHHHHh-hCCCEE
Confidence 5778887775 68888888877554 578887
No 200
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=58.39 E-value=11 Score=26.88 Aligned_cols=24 Identities=25% Similarity=0.288 Sum_probs=19.4
Q ss_pred EeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 55 LKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 55 iKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
++...+++|.+++..+.+ +|++|+
T Consensus 134 ~~v~~~~~t~~ea~~a~~-----~Gad~i 157 (234)
T 1yxy_A 134 QLLMADISTFDEGLVAHQ-----AGIDFV 157 (234)
T ss_dssp CEEEEECSSHHHHHHHHH-----TTCSEE
T ss_pred CeEEEeCCCHHHHHHHHH-----cCCCEE
Confidence 345557899999999988 799877
No 201
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=58.24 E-value=15 Score=27.16 Aligned_cols=45 Identities=13% Similarity=0.081 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHH-HHHHHHHHHhhCCCCccC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFED-SVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~-a~~~i~l~~~~lGa~w~~ 84 (106)
.+.+.+.+++.++..+..+.+|.+-++.+..+ +..+.+ +|++++.
T Consensus 149 ~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~-----~G~d~i~ 194 (311)
T 1ep3_A 149 PEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEA-----AGADGLT 194 (311)
T ss_dssp HHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHH-----TTCSEEE
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHH-----cCCCEEE
Confidence 34445555555555677899999988888666 666666 7999864
No 202
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=57.97 E-value=44 Score=26.14 Aligned_cols=56 Identities=11% Similarity=-0.094 Sum_probs=32.7
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++.+.++|+|| --+.|.......+ + .+.++.+++ .+ ++-|=+.||| |.++|.++++
T Consensus 256 a~~l~~~G~d~i~v~~~~~~~~~~~--~-~~~~~~i~~-------~~--~iPvi~~Ggi-~~~~a~~~l~ 312 (365)
T 2gou_A 256 AALLNKHRIVYLHIAEVDWDDAPDT--P-VSFKRALRE-------AY--QGVLIYAGRY-NAEKAEQAIN 312 (365)
T ss_dssp HHHHHHTTCSEEEEECCBTTBCCCC--C-HHHHHHHHH-------HC--CSEEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCCcCCCCCc--c-HHHHHHHHH-------HC--CCcEEEeCCC-CHHHHHHHHH
Confidence 45677889999 5555421111110 0 122333332 23 3456688999 9999999999
No 203
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=57.22 E-value=32 Score=26.56 Aligned_cols=29 Identities=17% Similarity=0.099 Sum_probs=16.2
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|++-||- |.++|+++++..++ +|. |+
T Consensus 191 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i-~i 219 (379)
T 2rdx_A 191 KAMADANQGW-RVDNAIRLARATRD-LDY-IL 219 (379)
T ss_dssp EEEEECTTCS-CHHHHHHHHHHTTT-SCC-EE
T ss_pred EEEEECCCCC-CHHHHHHHHHHHHh-CCe-EE
Confidence 4566665554 56666666655433 455 55
No 204
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=56.95 E-value=30 Score=33.65 Aligned_cols=59 Identities=19% Similarity=0.182 Sum_probs=35.2
Q ss_pred HhhCCCccc---CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHH
Q psy969 8 AFKGSNFRT---LHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWI 71 (106)
Q Consensus 8 i~aGadFKT---STG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i 71 (106)
.++|+|+-. .+|...+|-.+......-+..+...|++ . -++-|=++|||.|.+++.+++
T Consensus 713 ~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~---~--~~ipviaaGGI~~g~~i~aal 774 (2060)
T 2uva_G 713 AKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRK---C--SNIVLVAGSGFGGSEDTYPYL 774 (2060)
T ss_dssp HHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHT---S--TTEEEEEESSCCSHHHHHHHH
T ss_pred HHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHH---H--cCCCEEEeCCCCCHHHHHHHh
Confidence 688999944 5665444433100000112223333332 1 258889999999999999999
No 205
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.66 E-value=45 Score=26.28 Aligned_cols=57 Identities=11% Similarity=-0.063 Sum_probs=33.4
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++.+.++|+|| --+.|....... . .-.+.++.+++. + ++-|=+.||| +.++|.++++
T Consensus 261 a~~le~~Gvd~i~v~~~~~~~~~~-~-~~~~~~~~ik~~-------~--~iPvi~~Ggi-~~~~a~~~l~ 318 (377)
T 2r14_A 261 AGELDRRGLAYLHFNEPDWIGGDI-T-YPEGFREQMRQR-------F--KGGLIYCGNY-DAGRAQARLD 318 (377)
T ss_dssp HHHHHHTTCSEEEEECCC-------C-CCTTHHHHHHHH-------C--CSEEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEeCCcccCCCC-c-chHHHHHHHHHH-------C--CCCEEEECCC-CHHHHHHHHH
Confidence 45667889999 655553111100 0 013444444433 2 3456678999 6999999999
No 206
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=56.64 E-value=29 Score=27.69 Aligned_cols=38 Identities=18% Similarity=0.286 Sum_probs=24.7
Q ss_pred HHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 44 HFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 44 ~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+.++..++ .+.|.+-+|- |.++|++++...++ +|.+|+
T Consensus 222 avReavG~d~~L~vDaN~~~-~~~~Ai~~~~~Le~-~~i~~i 261 (412)
T 3stp_A 222 AVREVIGYDNDLMLECYMGW-NLDYAKRMLPKLAP-YEPRWL 261 (412)
T ss_dssp HHHHHHCSSSEEEEECTTCS-CHHHHHHHHHHHGG-GCCSEE
T ss_pred HHHHHcCCCCeEEEECCCCC-CHHHHHHHHHHHHh-cCCCEE
Confidence 33444444 5777777766 67888887776654 477776
No 207
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=56.46 E-value=16 Score=28.54 Aligned_cols=30 Identities=17% Similarity=0.292 Sum_probs=22.8
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|++-||- |.++|+++++..++ +|.+|+
T Consensus 196 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 225 (391)
T 2qgy_A 196 PLMLDLAVPE-DLDQTKSFLKEVSS-FNPYWI 225 (391)
T ss_dssp CEEEECCCCS-CHHHHHHHHHHHGG-GCCSEE
T ss_pred EEEEEcCCCC-CHHHHHHHHHHHHh-cCCCeE
Confidence 5778887775 68888888887655 688887
No 208
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=55.39 E-value=12 Score=26.97 Aligned_cols=24 Identities=21% Similarity=0.404 Sum_probs=18.8
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=+.|||++.+++.++++ +|++
T Consensus 75 iPvi~~ggi~~~~~i~~~~~-----~Gad 98 (266)
T 2w6r_A 75 LPIIASGGAGKMEHFLEAFL-----AGAD 98 (266)
T ss_dssp SCEEEESCCCSTHHHHHHHH-----HTCS
T ss_pred CCEEEECCCCCHHHHHHHHH-----cCCc
Confidence 33444699999999999988 5875
No 209
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=55.39 E-value=12 Score=29.56 Aligned_cols=29 Identities=34% Similarity=0.368 Sum_probs=24.2
Q ss_pred hhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 47 KLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 47 ~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+..+.++.+| ||.+.++|..+++ +|++.+
T Consensus 222 ~~~~~Pv~vk---gv~t~e~a~~a~~-----aGad~I 250 (380)
T 1p4c_A 222 DLWPHKLLVK---GLLSAEDADRCIA-----EGADGV 250 (380)
T ss_dssp HHCCSEEEEE---EECCHHHHHHHHH-----TTCSEE
T ss_pred HhcCCCEEEE---ecCcHHHHHHHHH-----cCCCEE
Confidence 3457788899 6899999999999 799865
No 210
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=55.36 E-value=10 Score=30.81 Aligned_cols=60 Identities=13% Similarity=0.084 Sum_probs=34.8
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhc-CCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLS-GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~-~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.++++|+|+ --.+..+ . ++.. .+.+++.++.. +-.+.+ |+|.|.++|..+++ +|++
T Consensus 260 a~~~~~aG~d~v~i~~~~G----~-----~~~~---~~~i~~i~~~~~~~pvi~---~~v~t~~~a~~l~~-----aGad 319 (514)
T 1jcn_A 260 LDLLTQAGVDVIVLDSSQG----N-----SVYQ---IAMVHYIKQKYPHLQVIG---GNVVTAAQAKNLID-----AGVD 319 (514)
T ss_dssp HHHHHHTTCSEEEECCSCC----C-----SHHH---HHHHHHHHHHCTTCEEEE---EEECSHHHHHHHHH-----HTCS
T ss_pred HHHHHHcCCCEEEeeccCC----c-----chhH---HHHHHHHHHhCCCCceEe---cccchHHHHHHHHH-----cCCC
Confidence 46788999999 5333222 1 2111 12222222224 223433 57999999999999 6998
Q ss_pred cc
Q psy969 82 WL 83 (106)
Q Consensus 82 w~ 83 (106)
++
T Consensus 320 ~I 321 (514)
T 1jcn_A 320 GL 321 (514)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 211
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=54.76 E-value=44 Score=26.14 Aligned_cols=31 Identities=0% Similarity=-0.115 Sum_probs=23.5
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-+|-+|.++|+++....++ +|.+|+
T Consensus 202 ~l~vDan~~~~~~~~A~~~~~~L~~-~~i~~i 232 (394)
T 3mqt_A 202 DMMVDCLYRWTDWQKARWTFRQLED-IDLYFI 232 (394)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHTGG-GCCSEE
T ss_pred eEEEECCCCCCCHHHHHHHHHHHhh-cCCeEE
Confidence 5778888887788888888876655 477776
No 212
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=54.32 E-value=46 Score=24.96 Aligned_cols=24 Identities=25% Similarity=0.266 Sum_probs=19.4
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-|=+-|||||.+||.+++. |++
T Consensus 180 ~~Pv~vGGGI~t~e~a~~~~~------gAD 203 (228)
T 3vzx_A 180 TSTLFYGGGIKDAETAKQYAE------HAD 203 (228)
T ss_dssp SSEEEEESSCCSHHHHHHHHT------TCS
T ss_pred CCCEEEeCCCCCHHHHHHHHh------CCC
Confidence 355667799999999999874 886
No 213
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=54.24 E-value=38 Score=26.77 Aligned_cols=53 Identities=11% Similarity=-0.061 Sum_probs=31.6
Q ss_pred hhHHHhhCCCc-ccCCC-CCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHG-RGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG-~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++...++|+|| --+.| +.+.+ - +.+++.++ +.+ ++-|=+.||| |.++|.++++
T Consensus 272 a~~l~~~Gvd~i~v~~~~~~~~~-~-----~~~~~~ir-------~~~--~iPvi~~G~i-t~~~a~~~l~ 326 (379)
T 3aty_A 272 CKKIEPLSLAYLHYLRGDMVNQQ-I-----GDVVAWVR-------GSY--SGVKISNLRY-DFEEADQQIR 326 (379)
T ss_dssp HHHHGGGCCSEEEEECSCTTSCC-C-----CCHHHHHH-------TTC--CSCEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEcCCCcCCCC-c-----cHHHHHHH-------HHC--CCcEEEECCC-CHHHHHHHHH
Confidence 45566789999 54543 32211 1 22133332 223 3456678999 9999999999
No 214
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=53.72 E-value=49 Score=25.11 Aligned_cols=33 Identities=15% Similarity=0.007 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
+.-+.+.+++ ..+.. |=+-+||+|.+|+.++.+
T Consensus 187 ~~~~v~~vr~---~~~~P--v~vGfGIst~e~a~~~~~ 219 (252)
T 3tha_A 187 LQDKVKEIRS---FTNLP--IFVGFGIQNNQDVKRMRK 219 (252)
T ss_dssp HHHHHHHHHT---TCCSC--EEEESSCCSHHHHHHHTT
T ss_pred HHHHHHHHHH---hcCCc--EEEEcCcCCHHHHHHHHh
Confidence 4444444443 34333 445789999999998865
No 215
>1qw2_A Conserved hypothetical protein TA1206; structural genomics, beta/alpha, antiparallel beta sandwich, protein structure initiative; 1.50A {Thermoplasma acidophilum} SCOP: d.249.1.1
Probab=53.30 E-value=9.6 Score=25.97 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=27.4
Q ss_pred ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHH
Q psy969 15 RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVR 69 (106)
Q Consensus 15 KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~ 69 (106)
+|+.||..=|+= |+.+ .+.+ +.+..|+. ||||+||.++
T Consensus 36 ~~~kG~imCGal-------Dv~~-~ekl--------~~~Aarv~-GV~t~edlL~ 73 (102)
T 1qw2_A 36 KGSKGYAMCGYL-------NMET-SNKV--------GDIAVRVM-GVKTLDDMLS 73 (102)
T ss_dssp ECSSCEEECTTC-------CHHH-HHHT--------TCCEEECC-SCCSHHHHHH
T ss_pred EeCceEEEeccc-------ChhH-HHhh--------ccceEEEE-ccCCHHHHhh
Confidence 788888766666 6776 4432 34778887 7999998764
No 216
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=53.15 E-value=53 Score=25.64 Aligned_cols=56 Identities=13% Similarity=-0.006 Sum_probs=32.3
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++.+.++|+|| --+.|....... .-.+.++.+++ .+ ++-|=+.||| |.+++.++++
T Consensus 257 a~~l~~~G~d~i~v~~~~~~~~~~---~~~~~~~~v~~-------~~--~iPvi~~Ggi-t~~~a~~~l~ 313 (364)
T 1vyr_A 257 IEELAKRGIAYLHMSETDLAGGKP---YSEAFRQKVRE-------RF--HGVIIGAGAY-TAEKAEDLIG 313 (364)
T ss_dssp HHHHHHTTCSEEEEECCBTTBCCC---CCHHHHHHHHH-------HC--CSEEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEecCcccCCCc---ccHHHHHHHHH-------HC--CCCEEEECCc-CHHHHHHHHH
Confidence 45667889999 555432111111 00222222222 23 3456788999 9999999999
No 217
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=52.75 E-value=25 Score=27.87 Aligned_cols=52 Identities=15% Similarity=0.190 Sum_probs=36.8
Q ss_pred hhhHHHhhCCCc---ccCCCCC------C--------CCCCCCCCCch-HHHHHHHHHHHHhhhcCC-ceeEeecC
Q psy969 3 RPRKVAFKGSNF---RTLHGRG------P--------DSTSYGNVCNT-CGIIMCSAIKHFHKLSGK-KIGLKPAG 59 (106)
Q Consensus 3 ~~~iai~aGadF---KTSTG~~------~--------~gat~~~~~~~-~v~lm~~~i~~~~~~~~~-~vgiKaaG 59 (106)
+++.|.+||.|. .-.+||- | .|-+ +| -.++++|.+++.++.++. .|+||.|.
T Consensus 177 AA~rA~~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS-----~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~ 247 (400)
T 4gbu_A 177 AAKNSIAAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGS-----IENRARFTLEVVDALVEAIGHEKVGLRLSP 247 (400)
T ss_dssp HHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSS-----HHHHTHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHhcCcCeeeecccccchHHheecCcCCCCccccCCc-----HHHHHHHHHHHHHHHHHHcCCCcEEEEecc
Confidence 577899999999 5577763 1 1233 44 477888888777777654 69999984
No 218
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=52.16 E-value=21 Score=27.39 Aligned_cols=30 Identities=13% Similarity=0.205 Sum_probs=20.8
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-+|- |.++|+++++..++ +|.+|+
T Consensus 190 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 219 (370)
T 1nu5_A 190 SVRVDVNQGW-DEQTASIWIPRLEE-AGVELV 219 (370)
T ss_dssp EEEEECTTCC-CHHHHHHHHHHHHH-HTCCEE
T ss_pred EEEEECCCCC-CHHHHHHHHHHHHh-cCcceE
Confidence 4777777664 67888887776555 477776
No 219
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=52.01 E-value=53 Score=25.53 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=19.4
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-||- |.++|+++++..++ +|.+|+
T Consensus 191 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 220 (397)
T 2qde_A 191 DLFIDINGAW-TYDQALTTIRALEK-YNLSKI 220 (397)
T ss_dssp CEEEECTTCC-CHHHHHHHHHHHGG-GCCSCE
T ss_pred EEEEECCCCC-CHHHHHHHHHHHHh-CCCCEE
Confidence 4667766664 67777777765544 477776
No 220
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=51.52 E-value=51 Score=24.74 Aligned_cols=63 Identities=14% Similarity=0.204 Sum_probs=41.0
Q ss_pred hhHHHhhCCCc-c-cCCCCCC----CCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF-R-TLHGRGP----DSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF-K-TSTG~~~----~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
+..|+++|+++ - |-.|.+. ++. .||++.|++-.+++.. +-.. || +++...+..+.+++.
T Consensus 218 ~laA~~aGa~~vd~tv~GlG~cp~a~g~-aGN~~~E~lv~~l~~~-------g~~~------~i-dl~~l~~~~~~~~~~ 282 (298)
T 2cw6_A 218 TLMALQMGVSVVDSSVAGLGGCPYAQGA-SGNLATEDLVYMLEGL-------GIHT------GV-NLQKLLEAGNFICQA 282 (298)
T ss_dssp HHHHHHTTCCEEEEBTTSCCCCTTSCSS-CCBCBHHHHHHHHHHH-------TCBC------CC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEeecccccCCCCCCCC-cCChhHHHHHHHHHhc-------CCCC------Cc-CHHHHHHHHHHHHHH
Confidence 35789999999 4 4555542 123 3788899877776431 2222 34 577777777777788
Q ss_pred CCCC
Q psy969 78 LGPD 81 (106)
Q Consensus 78 lGa~ 81 (106)
+|..
T Consensus 283 ~~~~ 286 (298)
T 2cw6_A 283 LNRK 286 (298)
T ss_dssp TTCC
T ss_pred HCCC
Confidence 8874
No 221
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=51.43 E-value=19 Score=26.63 Aligned_cols=61 Identities=8% Similarity=-0.026 Sum_probs=37.2
Q ss_pred hCCCc-c---cCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 10 KGSNF-R---TLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 10 aGadF-K---TSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
.++|| - -..||+.. .+...+++.++.+++.+++ .+..+-|=+.|||+ .+.+.++++ +|++.
T Consensus 127 ~~~D~VlvmsV~pGfggQ--~f~~~~l~kI~~lr~~~~~----~~~~~~I~VdGGI~-~~~~~~~~~-----aGAd~ 191 (231)
T 3ctl_A 127 HKADKITVMTVDPGFAGQ--PFIPEMLDKLAELKAWRER----EGLEYEIEVDGSCN-QATYEKLMA-----AGADV 191 (231)
T ss_dssp GGCSEEEEESSCTTCSSC--CCCTTHHHHHHHHHHHHHH----HTCCCEEEEESCCS-TTTHHHHHH-----HTCCE
T ss_pred hcCCEEEEeeeccCcCCc--cccHHHHHHHHHHHHHHhc----cCCCceEEEECCcC-HHHHHHHHH-----cCCCE
Confidence 46788 4 44566522 2222235556666555432 24467788899998 577888888 59863
No 222
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=51.24 E-value=25 Score=27.47 Aligned_cols=56 Identities=13% Similarity=0.111 Sum_probs=35.9
Q ss_pred hhhHHHhhCCCc---ccCCCCC------C----CCCCCCCCCch-HHHHHHHHHHHHhhhcCC-ceeEeecC
Q psy969 3 RPRKVAFKGSNF---RTLHGRG------P----DSTSYGNVCNT-CGIIMCSAIKHFHKLSGK-KIGLKPAG 59 (106)
Q Consensus 3 ~~~iai~aGadF---KTSTG~~------~----~gat~~~~~~~-~v~lm~~~i~~~~~~~~~-~vgiKaaG 59 (106)
+++.|.+||.|. .-.+||- | ..--||.. +| -.++++|.+++.++.+++ .++||.+.
T Consensus 157 AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS-~eNR~Rf~~Eii~avr~~vg~~~v~vRls~ 227 (358)
T 4a3u_A 157 AARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGA-VENRIRLLKDVTERVIATIGKERTAVRLSP 227 (358)
T ss_dssp HHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSS-HHHHTHHHHHHHHHHHHHHCGGGEEEEECC
T ss_pred HHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCC-HHHHHHHHHHHHHHHHHHcCccceEEEecc
Confidence 577899999999 5577753 1 11111111 44 377777777777777654 58999874
No 223
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=50.98 E-value=20 Score=28.03 Aligned_cols=30 Identities=10% Similarity=0.083 Sum_probs=22.1
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-||- |.++++++++..++ +|.+|+
T Consensus 222 ~l~vDan~~~-~~~~ai~~~~~l~~-~~i~~i 251 (398)
T 2pp0_A 222 PLMVDANQQW-DRETAIRMGRKMEQ-FNLIWI 251 (398)
T ss_dssp CEEEECTTCS-CHHHHHHHHHHHGG-GTCSCE
T ss_pred eEEEECCCCC-CHHHHHHHHHHHHH-cCCcee
Confidence 5778887775 58888888877544 578887
No 224
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=50.46 E-value=30 Score=28.61 Aligned_cols=63 Identities=10% Similarity=0.008 Sum_probs=35.0
Q ss_pred hhHHHhhCCCc-ccCCCCCC-CCC--CCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGP-DST--SYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~-~ga--t~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++.+.++|+|| -.|.|+.. ... +...+....+..+. .++ +.. ++-|=+.|||+|.++|.++++
T Consensus 234 a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~---~~~--~iPvi~~Ggi~~~~~a~~~l~ 300 (671)
T 1ps9_A 234 AQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTR-KLK---GHV--SLPLVTTNRINDPQVADDILS 300 (671)
T ss_dssp HHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHH-HHT---TSC--SSCEEECSSCCSHHHHHHHHH
T ss_pred HHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHH-HHH---Hhc--CceEEEeCCCCCHHHHHHHHH
Confidence 45566789999 66655431 111 00011111223222 222 222 355667899999999999999
No 225
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=49.93 E-value=53 Score=25.45 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=41.3
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCch-HHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNT-CGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~-~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
+.+.+.|.+- |---|. .+.+ ++ +++.+ +++ ++..++ .+.|.+-+|-.+.++|+++....++ +|.
T Consensus 155 ~~~~~~Gf~~iKlk~g~--~g~~-----~~~d~~~v-~av---R~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~-~~i 222 (374)
T 3sjn_A 155 QGLKDQGFSSIKFGGGV--MGDD-----PDTDYAIV-KAV---REAAGPEMEVQIDLASKWHTCGHSAMMAKRLEE-FNL 222 (374)
T ss_dssp HHHHTTTCSEEEEECTT--TTSC-----HHHHHHHH-HHH---HHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGG-GCC
T ss_pred HHHHHcCCCEEEeccCC--CCCC-----HHHHHHHH-HHH---HHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhh-cCc
Confidence 3445567777 765542 1223 33 33333 233 233444 6888998888779999999887655 588
Q ss_pred Ccc
Q psy969 81 DWL 83 (106)
Q Consensus 81 ~w~ 83 (106)
+|+
T Consensus 223 ~~i 225 (374)
T 3sjn_A 223 NWI 225 (374)
T ss_dssp SEE
T ss_pred eEE
Confidence 887
No 226
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=49.51 E-value=26 Score=27.96 Aligned_cols=61 Identities=15% Similarity=0.090 Sum_probs=35.7
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
++.+.++|+|. -..+ . .+ . .+... +.++++.+..+...-+ +|+|.+.+++..+++ +|++.
T Consensus 238 a~~l~~~G~d~ivi~~--a-~g-~-----~~~~~---~~i~~l~~~~p~~pvi--~G~v~t~~~a~~~~~-----~Gad~ 298 (491)
T 1zfj_A 238 AEALFEAGADAIVIDT--A-HG-H-----SAGVL---RKIAEIRAHFPNRTLI--AGNIATAEGARALYD-----AGVDV 298 (491)
T ss_dssp HHHHHHHTCSEEEECC--S-CT-T-----CHHHH---HHHHHHHHHCSSSCEE--EEEECSHHHHHHHHH-----TTCSE
T ss_pred HHHHHHcCCCeEEEee--e-cC-c-----chhHH---HHHHHHHHHCCCCcEe--CCCccCHHHHHHHHH-----cCCCE
Confidence 45678899999 4333 1 11 2 22221 2222222334332223 799999999999999 79985
Q ss_pred c
Q psy969 83 L 83 (106)
Q Consensus 83 ~ 83 (106)
+
T Consensus 299 I 299 (491)
T 1zfj_A 299 V 299 (491)
T ss_dssp E
T ss_pred E
Confidence 4
No 227
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=48.60 E-value=31 Score=26.07 Aligned_cols=63 Identities=16% Similarity=0.254 Sum_probs=41.3
Q ss_pred hhHHHhhCCCc--ccCCCCCC----CCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh
Q psy969 4 PRKVAFKGSNF--RTLHGRGP----DSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM 77 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~----~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~ 77 (106)
+..|+++|++. -|-.|.+- +|.+ ||++.|++-.+++. .|++. || +++...+..+.+++.
T Consensus 221 ~laAv~aGa~~vd~tv~GlG~cp~a~gr~-GN~~~E~lv~~l~~-----------~g~~~--~i-dl~~l~~~~~~~~~~ 285 (302)
T 2ftp_A 221 IYASLLEGIAVFDSSVAGLGGCPYAKGAT-GNVASEDVLYLLNG-----------LEIHT--GV-DMHALVDAGQRICAV 285 (302)
T ss_dssp HHHHHHTTCCEEEEBGGGCCBCGGGTTCB-CBCBHHHHHHHHHH-----------TTCBC--CC-CHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCEEEecccccCCCCCCCCCC-CChhHHHHHHHHHh-----------cCCCC--Cc-CHHHHHHHHHHHHHH
Confidence 35789999999 55555542 1233 78889988777643 12222 34 577777777777788
Q ss_pred CCCC
Q psy969 78 LGPD 81 (106)
Q Consensus 78 lGa~ 81 (106)
+|..
T Consensus 286 ~~~~ 289 (302)
T 2ftp_A 286 LGKS 289 (302)
T ss_dssp HCCC
T ss_pred hCCC
Confidence 8863
No 228
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=48.45 E-value=3.8 Score=29.35 Aligned_cols=47 Identities=9% Similarity=-0.058 Sum_probs=32.4
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEe
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 91 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiG 91 (106)
++.++.+++.+ +..+-|=+.|||+ .+.+.+.++ +|++++--+..-++
T Consensus 150 ~~~i~~lr~~~-------~~~~~i~v~GGI~-~~~~~~~~~-----aGad~ivvG~~I~~ 196 (216)
T 1q6o_A 150 EADITAIKRLS-------DMGFKVTVTGGLA-LEDLPLFKG-----IPIHVFIAGRSIRD 196 (216)
T ss_dssp HHHHHHHHHHH-------HTTCEEEEESSCC-GGGGGGGTT-----SCCSEEEESHHHHT
T ss_pred HHHHHHHHHhc-------CCCCcEEEECCcC-hhhHHHHHH-----cCCCEEEEeehhcC
Confidence 77888777654 2356678899999 777877777 79975444433333
No 229
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=48.29 E-value=10 Score=29.74 Aligned_cols=26 Identities=31% Similarity=0.561 Sum_probs=23.8
Q ss_pred cCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 58 AGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 58 aGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
--|++|.+||+...+++++++|-+|+
T Consensus 70 taG~~taeeAv~~a~lare~~gt~~i 95 (268)
T 2htm_A 70 TAGARTAEEAVRLARLGRLLTGERWV 95 (268)
T ss_dssp CTTCCSHHHHHHHHHHHHHHHCCSEE
T ss_pred ccCCCCHHHHHHHHHhhhHhcCccee
Confidence 34799999999999999999999995
No 230
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=47.83 E-value=26 Score=26.80 Aligned_cols=32 Identities=9% Similarity=-0.076 Sum_probs=25.7
Q ss_pred hhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 47 KLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 47 ~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+..+.++.+|-.|..-+.++|....+ +|++++
T Consensus 175 ~~~~~Pv~vK~~~~~~~~~~a~~a~~-----~Gad~I 206 (349)
T 1p0k_A 175 SRVSVPVIVKEVGFGMSKASAGKLYE-----AGAAAV 206 (349)
T ss_dssp HHCSSCEEEEEESSCCCHHHHHHHHH-----HTCSEE
T ss_pred HHcCCCEEEEecCCCCCHHHHHHHHH-----cCCCEE
Confidence 34577899998766678999999988 699875
No 231
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=47.51 E-value=69 Score=25.06 Aligned_cols=31 Identities=6% Similarity=-0.019 Sum_probs=22.8
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-+|-+|.++|++++...++ +|.+|+
T Consensus 207 ~l~vDaN~~~~~~~~A~~~~~~L~~-~~i~~i 237 (394)
T 3mkc_A 207 DMMVDYLYRFTDWYEVARLLNSIED-LELYFA 237 (394)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHTGG-GCCSEE
T ss_pred eEEEeCCCCCCCHHHHHHHHHHhhh-cCCeEE
Confidence 5777777777788888888776554 477776
No 232
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=47.36 E-value=23 Score=27.54 Aligned_cols=30 Identities=10% Similarity=0.316 Sum_probs=17.3
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-||- |.++|+++++..++ +|.+|+
T Consensus 212 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 241 (392)
T 1tzz_A 212 QLAVDANGRF-NLETGIAYAKMLRD-YPLFWY 241 (392)
T ss_dssp EEEEECTTCC-CHHHHHHHHHHHTT-SCCSEE
T ss_pred eEEEECCCCC-CHHHHHHHHHHHHH-cCCCee
Confidence 4556665554 46666666665433 466665
No 233
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=47.28 E-value=43 Score=25.16 Aligned_cols=64 Identities=16% Similarity=0.006 Sum_probs=39.0
Q ss_pred hHHHhhCCCcccC-CCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNFRTL-HGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadFKTS-TG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+|.++||+|-++ -|... ... .+=++-++-|. ++++..+.+..|-+|- +|+..+..+... +|++
T Consensus 119 ~~Aa~AGa~yISPfvgRi~-d~g--~dG~~~v~~i~----~~~~~~~~~T~IlaAS-~Rn~~~v~~aa~-----~G~d 183 (223)
T 3s1x_A 119 LLAAKAGVTYVSPFVGRLD-DIG--EDGMQIIDMIR----TIFNNYIIKTQILVAS-IRNPIHVLRSAV-----IGAD 183 (223)
T ss_dssp HHHHHTTCSEEEEBSHHHH-HTT--SCTHHHHHHHH----HHHHHTTCCSEEEEBS-CCSHHHHHHHHH-----HTCS
T ss_pred HHHHHcCCeEEEeecchHh-hcC--CCHHHHHHHHH----HHHHHcCCCCEEEEEe-CCCHHHHHHHHH-----cCCC
Confidence 4678899998433 22110 000 00033344444 4445557788899874 999999999877 5997
No 234
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=46.91 E-value=41 Score=25.27 Aligned_cols=24 Identities=25% Similarity=0.266 Sum_probs=19.8
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+-+=+-|||||.+|+.++++ |++
T Consensus 182 ~~Pv~vGgGI~t~e~a~~~~~------gAd 205 (240)
T 1viz_A 182 TSTLFYGGGIKDAETAKQYAE------HAD 205 (240)
T ss_dssp SSEEEEESSCCSHHHHHHHHT------TCS
T ss_pred CCCEEEEeccCCHHHHHHHHh------CCC
Confidence 455667899999999999876 775
No 235
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=46.75 E-value=18 Score=26.37 Aligned_cols=23 Identities=30% Similarity=0.242 Sum_probs=19.2
Q ss_pred eEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 54 GLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 54 giKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
.||. -||++.++|....+ +|+||
T Consensus 2 ~vKI-CGit~~eda~~a~~-----~GaD~ 24 (203)
T 1v5x_A 2 RVKI-CGITRLEDALLAEA-----LGAFA 24 (203)
T ss_dssp EEEE-CCCCCHHHHHHHHH-----HTCSE
T ss_pred cEEE-cCCCcHHHHHHHHH-----cCCCE
Confidence 4788 56999999999999 57775
No 236
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=46.67 E-value=18 Score=26.40 Aligned_cols=23 Identities=30% Similarity=0.364 Sum_probs=19.5
Q ss_pred eEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 54 GLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 54 giKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
.||. -||++.++|....+ +|+||
T Consensus 3 ~vKI-CGit~~eda~~a~~-----~GaD~ 25 (205)
T 1nsj_A 3 RVKI-CGITNLEDALFSVE-----SGADA 25 (205)
T ss_dssp EEEE-CCCCSHHHHHHHHH-----HTCSE
T ss_pred cEEE-CCCCcHHHHHHHHH-----cCCCE
Confidence 5888 56999999999999 58775
No 237
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=46.34 E-value=17 Score=28.97 Aligned_cols=34 Identities=26% Similarity=0.280 Sum_probs=25.5
Q ss_pred HHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 42 IKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 42 i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
|+..++..+.++.+| ||.+.++|....+ +|++++
T Consensus 244 i~~lr~~~~~PvivK---gv~~~e~A~~a~~-----aGad~I 277 (392)
T 2nzl_A 244 IKWLRRLTSLPIVAK---GILRGDDAREAVK-----HGLNGI 277 (392)
T ss_dssp HHHHC--CCSCEEEE---EECCHHHHHHHHH-----TTCCEE
T ss_pred HHHHHHhhCCCEEEE---ecCCHHHHHHHHH-----cCCCEE
Confidence 333344467789999 6789999999999 799875
No 238
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=46.05 E-value=24 Score=26.36 Aligned_cols=50 Identities=10% Similarity=0.136 Sum_probs=38.8
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccch
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSL 95 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~ 95 (106)
+++++.+.+.++++ .+.+-|=.-|||++.+++..+.. .|. +.+-||.+++
T Consensus 157 ~d~~~~~~~~ir~~----~~~~~ilyggsV~~~n~~~~~~~-----~gi-----DG~LVG~a~l 206 (226)
T 1w0m_A 157 PEAIVETVGLVSRH----FPEVSVITGAGIESGDDVAAALR-----LGT-----RGVLLASAAV 206 (226)
T ss_dssp HHHHHHHHHHHHHH----CTTSEEEEESSCCSHHHHHHHHH-----TTC-----SEEEECHHHH
T ss_pred hhHHHHHHHHHHhc----cCCCEEEEeCCCCcHHHHHHHHh-----CCC-----CEEEECHHHH
Confidence 77788888888765 45666667789999999999988 566 4678888754
No 239
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=45.80 E-value=49 Score=26.11 Aligned_cols=50 Identities=12% Similarity=0.117 Sum_probs=32.5
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++...++|+|| --|.|. . . .+.++.+++.+ + +-|=+.||| |.++|.++++
T Consensus 248 a~~l~~~Gvd~i~v~~~~--~--~-----~~~~~~ik~~~-------~--iPvi~~Ggi-t~e~a~~~l~ 298 (362)
T 4ab4_A 248 ARELGKRGIAFICSRERE--A--D-----DSIGPLIKEAF-------G--GPYIVNERF-DKASANAALA 298 (362)
T ss_dssp HHHHHHTTCSEEEEECCC--C--T-----TCCHHHHHHHH-------C--SCEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHhCCCEEEECCCC--C--C-----HHHHHHHHHHC-------C--CCEEEeCCC-CHHHHHHHHH
Confidence 44566789999 655553 1 1 12344444442 2 345678999 9999999999
No 240
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=45.74 E-value=50 Score=26.07 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=32.6
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++...++|+|| --|.|.. . .+.++.+++.+ + +-|=+.||| |.++|.++++
T Consensus 256 a~~l~~~Gvd~i~v~~~~~----~-----~~~~~~ik~~~-------~--iPvi~~Ggi-t~e~a~~~l~ 306 (361)
T 3gka_A 256 ARELGRRRIAFLFARESFG----G-----DAIGQQLKAAF-------G--GPFIVNENF-TLDSAQAALD 306 (361)
T ss_dssp HHHHHHTTCSEEEEECCCS----T-----TCCHHHHHHHH-------C--SCEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCCC----C-----HHHHHHHHHHc-------C--CCEEEeCCC-CHHHHHHHHH
Confidence 34566789999 6666531 1 13344444442 2 235577999 9999999999
No 241
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=45.51 E-value=51 Score=26.27 Aligned_cols=49 Identities=8% Similarity=-0.012 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 35 GIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
++...+.+++.++..++ .+.|.+-+|- |.++|+++.+..++ +|..|+ +|
T Consensus 205 ~~~d~e~v~avR~avG~d~~L~vDaN~~~-~~~~A~~~~~~Le~-~~i~~iEqP 256 (422)
T 3tji_A 205 MSNTVEMFHALREKYGWKLHILHDVHERL-FPQQAVQLAKQLEP-FQPYFIEDI 256 (422)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCS-CHHHHHHHHHHHGG-GCCSEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCCCC-CHHHHHHHHHHHHh-hCCCeEECC
Confidence 33444444444555555 6889998887 79999999887665 589997 44
No 242
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=45.34 E-value=16 Score=26.94 Aligned_cols=21 Identities=19% Similarity=0.449 Sum_probs=17.3
Q ss_pred CceeEeecCCCCCHHHHHHHH
Q psy969 51 KKIGLKPAGGISTFEDSVRWI 71 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i 71 (106)
+++-|=+||||++++|..++-
T Consensus 195 ~~ipviasGGv~~~~Dl~~l~ 215 (243)
T 4gj1_A 195 PNICIQASGGVASLKDLENLK 215 (243)
T ss_dssp TTSEEEEESCCCSHHHHHHTT
T ss_pred CCCCEEEEcCCCCHHHHHHHH
Confidence 457788999999999987763
No 243
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=45.32 E-value=24 Score=27.44 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=15.4
Q ss_pred CCceeEeecCCCCCHHHHHHHHHHH
Q psy969 50 GKKIGLKPAGGISTFEDSVRWIYLV 74 (106)
Q Consensus 50 ~~~vgiKaaGGIrt~~~a~~~i~l~ 74 (106)
...+++=+-||-+.+|+-.++-+++
T Consensus 159 ~~SvKffPm~Gl~~l~E~~avAka~ 183 (249)
T 3m0z_A 159 GSSIKYFPMGGLKHRAEFEAVAKAC 183 (249)
T ss_dssp CCEEEECCCTTTTTHHHHHHHHHHH
T ss_pred CCeeeEeecCCcccHHHHHHHHHHH
Confidence 4456666666666666666665544
No 244
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=45.26 E-value=47 Score=26.42 Aligned_cols=49 Identities=10% Similarity=-0.033 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 35 GIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
++...+.+++.++..++ .+.|.+-+|- |.++|+++.+..++ +|.+|+ +|
T Consensus 209 ~~~d~e~v~avR~avG~d~~l~vDaN~~~-~~~~A~~~~~~L~~-~~i~~iEqP 260 (424)
T 3v3w_A 209 LNYIPDVFAAVRKEFGPDIHLLHDVHHRL-TPIEAARLGKALEP-YHLFWMEDA 260 (424)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCC-CHHHHHHHHHHHGG-GCCSEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCcEEEeCCCCC-CHHHHHHHHHHHHh-cCCCEEECC
Confidence 33333444444555655 6889998876 79999999887665 589997 44
No 245
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=45.05 E-value=23 Score=26.37 Aligned_cols=26 Identities=19% Similarity=0.132 Sum_probs=19.3
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.++-||. -||++.|++. .++ +|+||+
T Consensus 19 ~~M~VKI-CGit~~ed~~-a~~-----~gaD~i 44 (228)
T 4aaj_A 19 SHMFVKI-CGIKSLEELE-IVE-----KHADAT 44 (228)
T ss_dssp -CCEEEE-CCCCSHHHHH-HHH-----TTCSEE
T ss_pred CceEEEE-CCCCcHHHHH-HHH-----cCCCEE
Confidence 4578999 5699999974 566 688753
No 246
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=44.78 E-value=77 Score=27.94 Aligned_cols=76 Identities=12% Similarity=0.075 Sum_probs=45.8
Q ss_pred hhHHHhhCCCc-ccCCCCCCCC---CCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHH-HHHHHHHHHhhC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDS---TSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFED-SVRWIYLVLIML 78 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~g---at~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~-a~~~i~l~~~~l 78 (106)
.+.+.++|+|+ --.-| .|.. ..+|.....+-+.+.+.++..++..+-.+.+|.+.++.+..+ |..+.+ +
T Consensus 654 a~~~~~~g~d~iein~~-~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~-----~ 727 (1025)
T 1gte_A 654 SRKAEASGADALELNLS-CPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKE-----G 727 (1025)
T ss_dssp HHHHHHTTCSEEEEECC-CBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHH-----H
T ss_pred HHHHHhcCCCEEEEECC-CCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHH-----c
Confidence 45667889998 43222 1211 111222234556666666666666778899999998887655 555555 5
Q ss_pred CCCccCC
Q psy969 79 GPDWLNK 85 (106)
Q Consensus 79 Ga~w~~~ 85 (106)
|+++++-
T Consensus 728 G~d~i~v 734 (1025)
T 1gte_A 728 GADGVTA 734 (1025)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8888644
No 247
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=44.54 E-value=1e+02 Score=24.23 Aligned_cols=81 Identities=11% Similarity=-0.008 Sum_probs=0.0
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
.++.+.+.|..- |---|....+.....+-.++++.-.+.+++.++..++ .+.|.+-+|- |.++|+++....++ +|
T Consensus 158 ~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~-~~~~A~~~~~~l~~-~~ 235 (404)
T 4e5t_A 158 AAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQF-TVSGAKRLARRLEA-YD 235 (404)
T ss_dssp HHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCB-CHHHHHHHHHHHGG-GC
T ss_pred HHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCc-CHHHHHHHHHHHhh-cC
Q ss_pred CCcc-CC
Q psy969 80 PDWL-NK 85 (106)
Q Consensus 80 a~w~-~~ 85 (106)
.+|+ +|
T Consensus 236 i~~iEeP 242 (404)
T 4e5t_A 236 PLWFEEP 242 (404)
T ss_dssp CSEEECC
T ss_pred CcEEECC
No 248
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=44.48 E-value=42 Score=26.43 Aligned_cols=57 Identities=18% Similarity=0.092 Sum_probs=32.8
Q ss_pred hhHHHhhCCCc-ccCCCCC-CCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRG-PDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~-~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++...++|+|| --+.|.. +.+.. ....+.++.+++. ++ +-|=+.||| |.++|.++++
T Consensus 262 a~~le~~Gvd~i~v~~~~~~~~~~~--~~~~~~~~~vr~~-------~~--iPvi~~G~i-~~~~a~~~l~ 320 (376)
T 1icp_A 262 VESLNKYDLAYCHVVEPRMKTAWEK--IECTESLVPMRKA-------YK--GTFIVAGGY-DREDGNRALI 320 (376)
T ss_dssp HHHHGGGCCSEEEEECCSCCC--------CCCCSHHHHHH-------CC--SCEEEESSC-CHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCc--cccHHHHHHHHHH-------cC--CCEEEeCCC-CHHHHHHHHH
Confidence 34566789999 6665521 11100 0013334444433 22 345578999 9999999998
No 249
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=44.34 E-value=1.2e+02 Score=24.02 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=26.9
Q ss_pred HHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 41 AIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 41 ~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+++.++..++ .+.|.+-+|- |.++|+++....++ +|.+|+
T Consensus 190 ~v~avR~a~G~d~~l~vDaN~~~-~~~~A~~~~~~L~~-~~i~~i 232 (412)
T 4e4u_A 190 FCRRVREAVGSKADLLFGTHGQM-VPSSAIRLAKRLEK-YDPLWF 232 (412)
T ss_dssp HHHHHHHHHTTSSEEEECCCSCB-CHHHHHHHHHHHGG-GCCSEE
T ss_pred HHHHHHHHhCCCCeEEEECCCCC-CHHHHHHHHHHhhh-cCCcEE
Confidence 33344444554 5778887776 57888888776555 577786
No 250
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=44.33 E-value=61 Score=25.38 Aligned_cols=47 Identities=11% Similarity=0.039 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 35 GIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
++...+.+++.++..++ .+.|.+-+|- |.++|+++....++ +|.+|+
T Consensus 184 ~~~d~~~v~avR~a~G~d~~l~vDan~~~-~~~~A~~~~~~L~~-~~i~~i 232 (401)
T 3sbf_A 184 MDNTLTMFKSLREKYGNQFHILHDVHERL-FPNQAIQFAKEVEQ-YKPYFI 232 (401)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECTTCS-CHHHHHHHHHHHGG-GCCSCE
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCCCC-CHHHHHHHHHHHHh-cCCCEE
Confidence 33444444444555554 6889998886 68999999887765 589997
No 251
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=44.28 E-value=51 Score=26.11 Aligned_cols=46 Identities=11% Similarity=0.013 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 36 IIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 36 ~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+...+.+++.++..++ .+.|.+-+|- |.++|+++.+..++ +|.+|+
T Consensus 204 ~~d~~~v~avR~a~G~d~~l~vDaN~~~-~~~~A~~~~~~L~~-~~i~~i 251 (418)
T 3r4e_A 204 NYVPKLFEELRKTYGFDHHLLHDGHHRY-TPQEAANLGKMLEP-YQLFWL 251 (418)
T ss_dssp HHHHHHHHHHHHHHCSSSEEEEECTTCS-CHHHHHHHHHHHGG-GCCSEE
T ss_pred HHHHHHHHHHHHHcCCCCeEEEeCCCCC-CHHHHHHHHHHHHh-hCCCEE
Confidence 3333444444555655 6889998876 69999999887665 589997
No 252
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=44.28 E-value=1e+02 Score=24.60 Aligned_cols=76 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred hhhHHHhhCCCc-ccCCC-----CCCCCCCCCCCCchHHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHH
Q psy969 3 RPRKVAFKGSNF-RTLHG-----RGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLV 74 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG-----~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~ 74 (106)
.++.+.+.|.+- |--.| +...... .++++.-.+.+++.++..++ .+.|.+-||- |.++|+++....
T Consensus 153 ~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~-----~~~~~~d~e~v~avR~avG~d~~L~vDan~~~-t~~~A~~~~~~L 226 (433)
T 3rcy_A 153 SAADCVARGYTAVKFDPAGPYTLRGGHMPA-----MTDISLSVEFCRKIRAAVGDKADLLFGTHGQF-TTAGAIRLGQAI 226 (433)
T ss_dssp HHHHHHHTTCSEEEECCSCCCBTTCCBCCC-----HHHHHHHHHHHHHHHHHHTTSSEEEECCCSCB-CHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCcccccCCCcc-----hhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCC-CHHHHHHHHHHh
Q ss_pred HhhCCCCcc-CC
Q psy969 75 LIMLGPDWL-NK 85 (106)
Q Consensus 75 ~~~lGa~w~-~~ 85 (106)
++ +|..|+ +|
T Consensus 227 e~-~~i~~iEeP 237 (433)
T 3rcy_A 227 EP-YSPLWYEEP 237 (433)
T ss_dssp GG-GCCSEEECC
T ss_pred hh-cCCCEEECC
No 253
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=43.85 E-value=17 Score=29.86 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=17.8
Q ss_pred CCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 59 GGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 59 GGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
|.|.|.++|.++++ +|++.+
T Consensus 278 g~v~t~e~a~~l~~-----aGaD~I 297 (496)
T 4fxs_A 278 GNVATAEGARALIE-----AGVSAV 297 (496)
T ss_dssp EEECSHHHHHHHHH-----HTCSEE
T ss_pred cccCcHHHHHHHHH-----hCCCEE
Confidence 78999999999999 699865
No 254
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=43.65 E-value=96 Score=24.82 Aligned_cols=47 Identities=11% Similarity=0.015 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 37 IMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 37 lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
...+.+++.++..++ .+.|.+-+|- |.++|++++...++ +|..|+ +|
T Consensus 225 ~d~~~v~avR~a~G~d~~L~vDaN~~~-~~~~A~~~~~~L~~-~~i~~iEeP 274 (440)
T 3t6c_A 225 SIPRLFDHLRNKLGFSVELLHDAHERI-TPINAIHMAKALEP-YQLFFLEDP 274 (440)
T ss_dssp HHHHHHHHHHHHHCSSSEEEEECTTCS-CHHHHHHHHHHTGG-GCCSEEECS
T ss_pred HHHHHHHHHHHhcCCCCeEEEECCCCC-CHHHHHHHHHHhhh-cCCCEEECC
Confidence 333344444455655 6889999887 68999999887655 588897 44
No 255
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=43.56 E-value=55 Score=26.27 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=26.5
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccchH
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLL 96 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~~ 96 (106)
+++.|=+|||| |.+.+.+|.+ .|++ .||.++.+
T Consensus 269 ~~~~I~aSggl-~~~~i~~l~~-----~GvD-------~~gvGt~l 301 (398)
T 2i1o_A 269 SDIKIMVSGGL-DENTVKKLRE-----AGAE-------AFGVGTSI 301 (398)
T ss_dssp TTSEEEEESSC-CHHHHHHHHH-----TTCC-------EEEECHHH
T ss_pred CceEEEEeCCC-CHHHHHHHHH-----cCCC-------EEEeCccc
Confidence 36899999999 7999999998 6875 77776644
No 256
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=43.37 E-value=54 Score=25.35 Aligned_cols=79 Identities=13% Similarity=0.046 Sum_probs=45.4
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCC----CCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCC---HHHHHHHHHHH
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDS----TSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGIST---FEDSVRWIYLV 74 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~g----at~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt---~~~a~~~i~l~ 74 (106)
+++.+.++|+|. --.-| .|.. -.||+.-..+.+++.+.++++.+.++-.|.+|..=|+.+ .++..++...+
T Consensus 75 aA~~a~~~G~D~IeIn~g-cP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l 153 (350)
T 3b0p_A 75 AARIGEAFGYDEINLNLG-CPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAM 153 (350)
T ss_dssp HHHHHHHTTCSEEEEEEC-CCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCc-CCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHH
Confidence 456777888887 43333 1110 001111134566777777777666777899998656643 34555555444
Q ss_pred HhhCCCCcc
Q psy969 75 LIMLGPDWL 83 (106)
Q Consensus 75 ~~~lGa~w~ 83 (106)
++ +|++++
T Consensus 154 ~~-aG~d~I 161 (350)
T 3b0p_A 154 AE-AGVKVF 161 (350)
T ss_dssp HH-TTCCEE
T ss_pred HH-cCCCEE
Confidence 32 699885
No 257
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=43.32 E-value=34 Score=28.85 Aligned_cols=59 Identities=8% Similarity=0.005 Sum_probs=0.0
Q ss_pred hhHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 4 PRKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
+..|+++|||. =|-.|++.. .||++.+++-.++ ...|+.. || +++...++.+.++++++
T Consensus 238 ~laAveAGa~~VD~ti~g~Ger---tGN~~lE~lv~~L-----------~~~g~~t--gi-dl~~L~~is~~v~~~~~ 298 (539)
T 1rqb_A 238 LMKAIEAGVDVVDTAISSMSLG---PGHNPTESVAEML-----------EGTGYTT--NL-DYDRLHKIRDHFKAIRP 298 (539)
T ss_dssp HHHHHHTTCSEEEEBCGGGCST---TSBCBHHHHHHHT-----------TTSSEEC--CC-CHHHHHHHHHHHHHHGG
T ss_pred HHHHHHhCCCEEEEeccccCCC---ccChhHHHHHHHH-----------HhcCCCc--hh-hHHHHHHHHHHHHHHhC
No 258
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=42.80 E-value=25 Score=26.95 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=0.0
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhh-CCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIM-LGP 80 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~-lGa 80 (106)
.++.+.+.|.+. |---|....... .+.++.+++++- -.-.+.|.+-+|- |.++|+++++..++. +|.
T Consensus 147 ~a~~~~~~Gf~~iKik~g~~~~~~d-----~~~v~avr~a~g-----~~~~l~vDan~~~-~~~~a~~~~~~l~~~~~~i 215 (366)
T 1tkk_A 147 DAENYLKQGFQTLKIKVGKDDIATD-----IARIQEIRKRVG-----SAVKLRLDANQGW-RPKEAVTAIRKMEDAGLGI 215 (366)
T ss_dssp HHHHHHHHTCCEEEEECCSSCHHHH-----HHHHHHHHHHHC-----SSSEEEEECTTCS-CHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHcCCCeEEEEeCCCCHHHH-----HHHHHHHHHHhC-----CCCeEEEECCCCC-CHHHHHHHHHHHhhcCCCc
Q ss_pred Ccc-CC
Q psy969 81 DWL-NK 85 (106)
Q Consensus 81 ~w~-~~ 85 (106)
+|+ +|
T Consensus 216 ~~iEqP 221 (366)
T 1tkk_A 216 ELVEQP 221 (366)
T ss_dssp EEEECC
T ss_pred eEEECC
No 259
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=42.41 E-value=19 Score=27.47 Aligned_cols=38 Identities=11% Similarity=-0.007 Sum_probs=28.0
Q ss_pred HHHHHHhhhcCCceeEe-ecCCCCCHHHHHHHHHHHHhhCCCCccC
Q psy969 40 SAIKHFHKLSGKKIGLK-PAGGISTFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 40 ~~i~~~~~~~~~~vgiK-aaGGIrt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
+.+++.++ .+.++.+| ...| -+.++|..+.+ +|++++.
T Consensus 172 ~~i~~vr~-~~~Pv~vK~v~~g-~~~e~a~~~~~-----~G~d~I~ 210 (332)
T 1vcf_A 172 ERLAELLP-LPFPVMVKEVGHG-LSREAALALRD-----LPLAAVD 210 (332)
T ss_dssp HHHHHHCS-CSSCEEEECSSSC-CCHHHHHHHTT-----SCCSEEE
T ss_pred HHHHHHHc-CCCCEEEEecCCC-CCHHHHHHHHH-----cCCCEEE
Confidence 34445555 57789999 5445 68999998888 7999873
No 260
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=42.35 E-value=1e+02 Score=24.31 Aligned_cols=68 Identities=15% Similarity=0.237 Sum_probs=0.0
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCc--eeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKK--IGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~--vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
.++.+.+.|.+. |---|. + ++....+.+++++. .++. +.|.+-||- |.++|+++++..++ +|
T Consensus 192 ~a~~~~~~Gf~~vKik~g~-----~-----~~~d~e~v~avR~a---vG~d~~l~vDan~~~-~~~eai~~~~~L~~-~~ 256 (428)
T 3bjs_A 192 EAQEYIARGYKALKLRIGD-----A-----ARVDIERVRHVRKV---LGDEVDILTDANTAY-TMADARRVLPVLAE-IQ 256 (428)
T ss_dssp HHHHHHHHTCSEEEEECCS-----C-----HHHHHHHHHHHHHH---HCTTSEEEEECTTCC-CHHHHHHHHHHHHH-TT
T ss_pred HHHHHHHCCCCEEEECCCC-----C-----HHHHHHHHHHHHHh---cCCCCEEEEECCCCC-CHHHHHHHHHHHHh-cC
Q ss_pred CCcc-CC
Q psy969 80 PDWL-NK 85 (106)
Q Consensus 80 a~w~-~~ 85 (106)
.+|+ +|
T Consensus 257 i~~iEqP 263 (428)
T 3bjs_A 257 AGWLEEP 263 (428)
T ss_dssp CSCEECC
T ss_pred CCEEECC
No 261
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=41.47 E-value=34 Score=24.76 Aligned_cols=49 Identities=20% Similarity=0.148 Sum_probs=33.9
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccc
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS 94 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs 94 (106)
++++..+.+.++++ ...+-|=+-|||++.+++..+.+ .|+| .+-+|+..
T Consensus 154 ~~~~~~~~~~ir~~----~~~~~ii~ggGI~~~~~~~~~~~-----~gaD-----gvlVGsAi 202 (219)
T 2h6r_A 154 PEVVEGTVRAVKEI----NKDVKVLCGAGISKGEDVKAALD-----LGAE-----GVLLASGV 202 (219)
T ss_dssp --CSHHHHHHHHHH----CTTCEEEECSSCCSHHHHHHHHT-----TTCC-----CEEESHHH
T ss_pred HHHHHHHHHHHHhc----cCCCeEEEEeCcCcHHHHHHHhh-----CCCC-----EEEEcHHH
Confidence 44466666666654 33566777899999999999988 5764 56777654
No 262
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=41.28 E-value=1.2e+02 Score=24.01 Aligned_cols=41 Identities=15% Similarity=0.180 Sum_probs=25.8
Q ss_pred HHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 41 AIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 41 ~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+++.++..++ .+.|.+-+|- |.++|+++.+..++ +|.+|+
T Consensus 167 ~v~avR~avG~d~~L~vDaN~~~-~~~~A~~~~~~L~~-~~i~~i 209 (405)
T 3rr1_A 167 RVAEIRSAFGNTVEFGLDFHGRV-SAPMAKVLIKELEP-YRPLFI 209 (405)
T ss_dssp HHHHHHHTTGGGSEEEEECCSCB-CHHHHHHHHHHHGG-GCCSCE
T ss_pred HHHHHHHHhCCCceEEEECCCCC-CHHHHHHHHHHHHh-cCCCEE
Confidence 33334444544 5677777665 57888888776654 577776
No 263
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=41.07 E-value=14 Score=30.64 Aligned_cols=33 Identities=27% Similarity=0.418 Sum_probs=24.1
Q ss_pred ceeEeecCCCCCH-----------HHHHHHHHHHHhhCCCCccCCCceeEeccc
Q psy969 52 KIGLKPAGGISTF-----------EDSVRWIYLVLIMLGPDWLNKDLFRIGASS 94 (106)
Q Consensus 52 ~vgiKaaGGIrt~-----------~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs 94 (106)
.+-|=+-||||++ +++.++++ +|++ ..-||+..
T Consensus 327 ~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~-----aGad-----~V~igt~~ 370 (555)
T 1jvn_A 327 FVPLTVGGGIKDIVDVDGTKIPALEVASLYFR-----SGAD-----KVSIGTDA 370 (555)
T ss_dssp CSCEEEESSCSCEECTTCCEECHHHHHHHHHH-----HTCS-----EEEECHHH
T ss_pred CCcEEEeCccccchhcccccchHHHHHHHHHH-----cCCC-----EEEECCHH
Confidence 4666677999998 55999999 6986 22356654
No 264
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=41.05 E-value=21 Score=26.30 Aligned_cols=30 Identities=10% Similarity=0.255 Sum_probs=23.3
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCC
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKD 86 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~ 86 (106)
.++-|=+.|||+ .+++.++++ +|++.+=.+
T Consensus 168 ~~~~I~VdGGI~-~~t~~~~~~-----aGAd~~VvG 197 (228)
T 3ovp_A 168 PSLDIEVDGGVG-PDTVHKCAE-----AGANMIVSG 197 (228)
T ss_dssp TTCEEEEESSCS-TTTHHHHHH-----HTCCEEEES
T ss_pred CCCCEEEeCCcC-HHHHHHHHH-----cCCCEEEEe
Confidence 457788999996 799999999 699743333
No 265
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=40.96 E-value=34 Score=27.19 Aligned_cols=40 Identities=18% Similarity=0.036 Sum_probs=28.7
Q ss_pred HHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCC
Q psy969 41 AIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNK 85 (106)
Q Consensus 41 ~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~ 85 (106)
.|+++.+..+.+|.+|-.|---+.++|..+.+ +|++++.-
T Consensus 197 ~I~~l~~~~~~PVivK~vg~g~s~e~A~~l~~-----aGad~I~V 236 (365)
T 3sr7_A 197 HLSDYAKKLQLPFILKEVGFGMDVKTIQTAID-----LGVKTVDI 236 (365)
T ss_dssp HHHHHHHHCCSCEEEEECSSCCCHHHHHHHHH-----HTCCEEEC
T ss_pred HHHHHHHhhCCCEEEEECCCCCCHHHHHHHHH-----cCCCEEEE
Confidence 33444445688999995443379999999999 69987643
No 266
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=40.90 E-value=27 Score=27.50 Aligned_cols=27 Identities=33% Similarity=0.283 Sum_probs=23.6
Q ss_pred cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 49 SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 49 ~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.++.+| ||.+.++|....+ +|++++
T Consensus 228 ~~~PvivK---~v~~~e~a~~a~~-----~Gad~I 254 (368)
T 2nli_A 228 SGLPVFVK---GIQHPEDADMAIK-----RGASGI 254 (368)
T ss_dssp SSSCEEEE---EECSHHHHHHHHH-----TTCSEE
T ss_pred cCCCEEEE---cCCCHHHHHHHHH-----cCCCEE
Confidence 57789999 5899999999999 799875
No 267
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=40.50 E-value=96 Score=21.96 Aligned_cols=63 Identities=14% Similarity=0.120 Sum_probs=44.5
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhh---hcCCceeEeecCCCCCHHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHK---LSGKKIGLKPAGGISTFEDSVRWIYLV 74 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~---~~~~~vgiKaaGGIrt~~~a~~~i~l~ 74 (106)
.+.|...|+++ ...+|+.|.. + .+..+.+.+.++++.+ ..+-++.|-.- ..|.+++.++++.+
T Consensus 108 i~~a~~lG~~~v~~~~G~~~~~-~-----~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~--~~~~~~~~~l~~~~ 174 (290)
T 3tva_A 108 SDFASWVGCPAIGLHIGFVPES-S-----SPDYSELVRVTQDLLTHAANHGQAVHLETG--QESADHLLEFIEDV 174 (290)
T ss_dssp HHHHHHHTCSEEEECCCCCCCT-T-----SHHHHHHHHHHHHHHHHHHTTTCEEEEECC--SSCHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCCccc-c-----hHHHHHHHHHHHHHHHHHHHcCCEEEEecC--CCCHHHHHHHHHhc
Confidence 46788889999 9989987755 5 5666665555554433 23556777764 47999999999864
No 268
>3cwn_A Transaldolase B; directed evolution, cytoplasm, pentose shunt, transferase; 1.40A {Escherichia coli} PDB: 3kof_A 1ucw_A* 1onr_A 1i2r_A 1i2q_A 1i2o_A 1i2p_A 1i2n_A
Probab=40.10 E-value=80 Score=24.95 Aligned_cols=38 Identities=18% Similarity=0.220 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+..++ .|.++++..+-+.+||++- +|+..+..+ + +|++
T Consensus 223 v~~v~-~iy~~y~~~~~~T~v~~AS-~r~~~~V~~---L----aG~d 260 (337)
T 3cwn_A 223 VVSVS-EIYQYYKEHGYETVVMGAS-FRNIGEILE---L----AGCD 260 (337)
T ss_dssp HHHHH-HHHHHHHHTTCCCEEEEBC-CSCHHHHHH---T----TTSS
T ss_pred HHHHH-HHHHHHHHcCCCcEEEeCc-cCCHHHHHH---h----hCCC
Confidence 44433 3445566667889999975 999999887 2 5986
No 269
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=39.68 E-value=23 Score=26.25 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=25.2
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEe
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 91 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiG 91 (106)
.+-|=+.|||. .+.+.++++ +|++++-.+..-++
T Consensus 173 ~~~I~VdGGI~-~~ti~~~~~-----aGAd~~V~GsaIf~ 206 (227)
T 1tqx_A 173 NLNIQVDGGLN-IETTEISAS-----HGANIIVAGTSIFN 206 (227)
T ss_dssp TCEEEEESSCC-HHHHHHHHH-----HTCCEEEESHHHHT
T ss_pred CCeEEEECCCC-HHHHHHHHH-----cCCCEEEEeHHHhC
Confidence 67788899998 789999999 69975444444443
No 270
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=39.12 E-value=99 Score=22.90 Aligned_cols=57 Identities=14% Similarity=-0.221 Sum_probs=39.6
Q ss_pred hhHHHhhCCCc---ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 4 PRKVAFKGSNF---RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 4 ~~iai~aGadF---KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
++...++||+. -|-.+|. ..+ +++++.+++. ++-.|-.| ++|.+..|..+..+ +|+
T Consensus 71 A~~~~~~GA~~isvlt~~~~f--~G~-----~~~l~~i~~~-------v~lPvl~k--dfI~d~~qi~~a~~-----~GA 129 (254)
T 1vc4_A 71 ALAYARGGARAVSVLTEPHRF--GGS-----LLDLKRVREA-------VDLPLLRK--DFVVDPFMLEEARA-----FGA 129 (254)
T ss_dssp HHHHHHTTCSEEEEECCCSSS--CCC-----HHHHHHHHHH-------CCSCEEEE--SCCCSHHHHHHHHH-----TTC
T ss_pred HHHHHHcCCCEEEEecchhhh--ccC-----HHHHHHHHHh-------cCCCEEEC--CcCCCHHHHHHHHH-----cCC
Confidence 34566788988 3555543 235 6777777764 34566655 69999999888887 799
Q ss_pred C
Q psy969 81 D 81 (106)
Q Consensus 81 ~ 81 (106)
+
T Consensus 130 D 130 (254)
T 1vc4_A 130 S 130 (254)
T ss_dssp S
T ss_pred C
Confidence 7
No 271
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=38.78 E-value=66 Score=25.64 Aligned_cols=47 Identities=11% Similarity=-0.073 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 35 GIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
++...+.+++.++..++ .+.|.+-||- |.++|+++....++ +|.+|+
T Consensus 211 ~~~~~e~v~avR~a~G~d~~L~vDaN~~~-~~~~A~~~~~~L~~-~~i~~i 259 (426)
T 4e4f_A 211 LDFTPKLFEAVRDKFGFNEHLLHDMHHRL-TPIEAARFGKSVED-YRLFWM 259 (426)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECTTCS-CHHHHHHHHHHTGG-GCCSEE
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCC-CHHHHHHHHHHHhh-cCCCEE
Confidence 34444445555555654 6888998886 79999999887655 588887
No 272
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=38.33 E-value=22 Score=25.37 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=20.3
Q ss_pred eeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 53 IGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 53 vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+-|=+.|||++.+++.++++ .|++
T Consensus 74 ipvi~~Ggi~~~~~~~~~~~-----~Gad 97 (241)
T 1qo2_A 74 EHIQIGGGIRSLDYAEKLRK-----LGYR 97 (241)
T ss_dssp GGEEEESSCCSHHHHHHHHH-----TTCC
T ss_pred CcEEEECCCCCHHHHHHHHH-----CCCC
Confidence 45667799999999999998 6885
No 273
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=38.15 E-value=46 Score=27.28 Aligned_cols=21 Identities=29% Similarity=0.382 Sum_probs=18.3
Q ss_pred cCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 58 AGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 58 aGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+|+|.|.++|+.+++ +|++++
T Consensus 302 ~g~v~t~e~a~~~~~-----aGad~i 322 (511)
T 3usb_A 302 AGNVATAEATKALIE-----AGANVV 322 (511)
T ss_dssp EEEECSHHHHHHHHH-----HTCSEE
T ss_pred eeeeccHHHHHHHHH-----hCCCEE
Confidence 468999999999999 699865
No 274
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=37.82 E-value=69 Score=24.12 Aligned_cols=33 Identities=15% Similarity=-0.006 Sum_probs=22.1
Q ss_pred CCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccC
Q psy969 50 GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 50 ~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
+..+.||.+.++ +.++..++.+.+++ .|+++++
T Consensus 211 ~~Pv~vKi~~~~-~~~~~~~~a~~l~~-~Gvd~i~ 243 (336)
T 1f76_A 211 YVPIAVKIAPDL-SEEELIQVADSLVR-HNIDGVI 243 (336)
T ss_dssp CCCEEEECCSCC-CHHHHHHHHHHHHH-TTCSEEE
T ss_pred cCceEEEecCCC-CHHHHHHHHHHHHH-cCCcEEE
Confidence 568999999875 45565555444332 6999864
No 275
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=37.77 E-value=98 Score=21.66 Aligned_cols=66 Identities=12% Similarity=-0.007 Sum_probs=43.1
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhh-cCCceeEeecCC-----CCCHHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKL-SGKKIGLKPAGG-----ISTFEDSVRWIYLV 74 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~-~~~~vgiKaaGG-----Irt~~~a~~~i~l~ 74 (106)
.+.|.+.|+++ .+.+|+.+.... .+..+.+.+.+++..+. .+-++.+-.-.+ +.|.+++.++++.+
T Consensus 95 i~~A~~lG~~~v~~~~g~~~~~~~-----~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~ 167 (287)
T 2x7v_A 95 VEICRKLGIRYLNIHPGSHLGTGE-----EEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRDLV 167 (287)
T ss_dssp HHHHHHHTCCEEEECCEECTTSCH-----HHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEecCCCCCCCH-----HHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHHHhc
Confidence 46788889999 988886543223 34455666666555332 344667766544 26899999999863
No 276
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=37.17 E-value=26 Score=25.52 Aligned_cols=40 Identities=10% Similarity=0.100 Sum_probs=27.7
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.++.+++.+++ .+..+.|=+-|||+. +++.++++ +|++
T Consensus 157 ~~~i~~lr~~~~~----~~~~~~I~v~GGI~~-~~~~~~~~-----aGad 196 (230)
T 1tqj_A 157 LPKIRALRQMCDE----RGLDPWIEVDGGLKP-NNTWQVLE-----AGAN 196 (230)
T ss_dssp HHHHHHHHHHHHH----HTCCCEEEEESSCCT-TTTHHHHH-----HTCC
T ss_pred HHHHHHHHHHHHh----cCCCCcEEEECCcCH-HHHHHHHH-----cCCC
Confidence 4445555544322 234677888999998 99999998 5986
No 277
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=37.06 E-value=48 Score=24.70 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=22.7
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.++.+++. .+-++.+ -||||+. ++.+++ + |++
T Consensus 65 ~~~i~~i~~~-------~~~pv~v--gGGir~~-~~~~~l-~-----Ga~ 98 (260)
T 2agk_A 65 DDAAREALQE-------SPQFLQV--GGGINDT-NCLEWL-K-----WAS 98 (260)
T ss_dssp HHHHHHHHHH-------STTTSEE--ESSCCTT-THHHHT-T-----TCS
T ss_pred HHHHHHHHhc-------CCceEEE--eCCCCHH-HHHHHh-c-----CCC
Confidence 5555555443 3445655 7999987 888887 4 886
No 278
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=36.76 E-value=66 Score=24.87 Aligned_cols=53 Identities=13% Similarity=-0.022 Sum_probs=32.5
Q ss_pred HhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHH
Q psy969 8 AFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYL 73 (106)
Q Consensus 8 i~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l 73 (106)
+++|||| -|=--|- ++...-+++.+++.--..+=-.||.+ |.++.++..|-++
T Consensus 173 vdAGAdf~iTQ~ffD----------~~~~~~f~~~~r~~Gi~vPIi~GImP---i~s~~~~~~~~~~ 226 (304)
T 3fst_A 173 VDAGANRAITQFFFD----------VESYLRFRDRCVSAGIDVEIIPGILP---VSNFKQAKKLADM 226 (304)
T ss_dssp HHHTCCEEEECCCSC----------HHHHHHHHHHHHHTTCCSCEECEECC---CSCHHHHHHHHHH
T ss_pred HHcCCCEEEeCccCC----------HHHHHHHHHHHHhcCCCCcEEEEecc---cCCHHHHHHHHHc
Confidence 5799999 9877664 55655555555432000111235554 7899999988553
No 279
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=36.49 E-value=1.1e+02 Score=23.89 Aligned_cols=32 Identities=6% Similarity=-0.052 Sum_probs=23.5
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
.+.|.+-++- |.++|+++....++ +|..|+ +|
T Consensus 201 ~l~vDaN~~~-~~~~A~~~~~~l~~-~~i~~iEeP 233 (388)
T 3tcs_A 201 DLLIDANSCY-TPDRAIEVGHMLQD-HGFCHFEEP 233 (388)
T ss_dssp EEEEECTTCC-CHHHHHHHHHHHHH-TTCCEEECC
T ss_pred eEEEeCCCCc-CHHHHHHHHHHHhh-cCCeEEECC
Confidence 5778887776 58888888876655 588887 44
No 280
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=36.42 E-value=74 Score=26.75 Aligned_cols=50 Identities=20% Similarity=0.192 Sum_probs=34.9
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCc----eeEeccch
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDL----FRIGASSL 95 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~----~RiGtSs~ 95 (106)
-.+|+.++. ..+.||||. |==-+.++++++++. |.++ =.|+. .|+|+...
T Consensus 290 gAHVef~rg--------I~NPIGvKv-GP~~~p~elv~L~~~----LnP~-~epGRlTLI~RmGa~kv 343 (462)
T 3rzi_A 290 GAHIAFAQV--------IANPVGVKL-GPNMTPELAVEYVER----LDPH-NKPGRLTLVSRMGNHKV 343 (462)
T ss_dssp SHHHHHHHH--------CCSCEEEEE-CTTCCHHHHHHHHHH----HCTT-CCTTSEEEEECCCTTTH
T ss_pred ccHHHHHhc--------CCCCeeEeE-CCCCCHHHHHHHHHH----hCCC-CCCCeEEEEEccCCchh
Confidence 347888764 368999999 777889999999996 3332 23333 46787643
No 281
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=35.93 E-value=1.1e+02 Score=21.36 Aligned_cols=65 Identities=14% Similarity=0.080 Sum_probs=42.6
Q ss_pred hhHHHhhCCCc-ccCCCCCCCC-CCCCCCCchHHHHHHHHHHHHhhh-cCCceeEeecCC-----CCCHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDS-TSYGNVCNTCGIIMCSAIKHFHKL-SGKKIGLKPAGG-----ISTFEDSVRWIYL 73 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~g-at~~~~~~~~v~lm~~~i~~~~~~-~~~~vgiKaaGG-----Irt~~~a~~~i~l 73 (106)
.+.|.+.|+.+ ...+|+.+.. .. .+..+.+.+.+++..+. .+-++.|=.-.+ +.|++++.++++.
T Consensus 95 i~~A~~lGa~~v~~~~g~~~~~~~~-----~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 167 (285)
T 1qtw_A 95 MQRCEQLGLSLLNFHPGSHLMQISE-----EDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDG 167 (285)
T ss_dssp HHHHHHTTCCEEEECCCBCTTTSCH-----HHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECcCCCCCCCCH-----HHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHHHHHHHHh
Confidence 56788889999 8888876443 22 33445555555554322 355677776543 4689999999986
No 282
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=35.88 E-value=1.1e+02 Score=21.23 Aligned_cols=67 Identities=12% Similarity=0.209 Sum_probs=42.8
Q ss_pred hhHHHhhCCCc-ccCCCCCCCC-CCCCCCCchHHHHHHHHHHHH---hhhcCCceeEeecC--------CCCCHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDS-TSYGNVCNTCGIIMCSAIKHF---HKLSGKKIGLKPAG--------GISTFEDSVRW 70 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~g-at~~~~~~~~v~lm~~~i~~~---~~~~~~~vgiKaaG--------GIrt~~~a~~~ 70 (106)
.+.|...|+++ ...+|+.+.+ .+ -.+..+.+.+.+++. .+..+-++.|-.-. -+.|.+++.++
T Consensus 89 i~~a~~lG~~~v~~~~g~~~~~~~~----~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l 164 (275)
T 3qc0_A 89 VDEAAELGADCLVLVAGGLPGGSKN----IDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDI 164 (275)
T ss_dssp HHHHHHTTCSCEEEECBCCCTTCCC----HHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHH
T ss_pred HHHHHHhCCCEEEEeeCCCCCCCcC----HHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHH
Confidence 46788889999 9988876543 22 023344444444333 22346678888632 37899999999
Q ss_pred HHHH
Q psy969 71 IYLV 74 (106)
Q Consensus 71 i~l~ 74 (106)
++.+
T Consensus 165 ~~~~ 168 (275)
T 3qc0_A 165 CETL 168 (275)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9874
No 283
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=35.77 E-value=5.5 Score=29.23 Aligned_cols=42 Identities=12% Similarity=-0.070 Sum_probs=26.1
Q ss_pred CCCC-chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 28 GNVC-NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 28 ~~~~-~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
|-+| ++.++.+++.. +..+-|=+.||||-- ++...++ +|+++
T Consensus 150 Gvv~s~~e~~~ir~~~-------~~~~~i~v~gGI~~~-~~~~~~~-----aGad~ 192 (221)
T 3exr_A 150 GETWGEKDLNKVKKLI-------EMGFRVSVTGGLSVD-TLKLFEG-----VDVFT 192 (221)
T ss_dssp TCCCCHHHHHHHHHHH-------HHTCEEEEESSCCGG-GGGGGTT-----CCCSE
T ss_pred ccccCHHHHHHHHHhh-------cCCceEEEECCCCHH-HHHHHHH-----CCCCE
Confidence 3455 45677776653 345667789999654 4455555 68763
No 284
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=35.34 E-value=1.6e+02 Score=23.10 Aligned_cols=51 Identities=12% Similarity=0.008 Sum_probs=34.5
Q ss_pred hHHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 33 TCGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 33 ~~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
++++.-.+.+++.++..++ .+.|-+-||- |.++|+++....++ +|.+|+ +|
T Consensus 194 ~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~-~~~~A~~~~~~L~~-~~i~~iEqP 247 (410)
T 3dip_A 194 TDLKDGLEPFRKIRAAVGQRIEIMCELHSLW-GTHAAARICNALAD-YGVLWVEDP 247 (410)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSEEEEECTTCB-CHHHHHHHHHHGGG-GTCSEEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEECCCCC-CHHHHHHHHHHHHh-cCCCEEECC
Confidence 3344334444444555664 6888888776 68999999887665 588898 55
No 285
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=35.18 E-value=1.4e+02 Score=23.40 Aligned_cols=49 Identities=10% Similarity=0.017 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc-CC
Q psy969 35 GIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL-NK 85 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~-~~ 85 (106)
++...+.+++.++..++ .+.|.+-+|- |.++|++++...++ +|.+|+ .|
T Consensus 196 ~~~~~e~v~avR~avG~d~~l~vDaN~~~-~~~~A~~~~~~L~~-~~i~~iE~P 247 (409)
T 3go2_A 196 LRNLRAHLEALRDGAGPDVEILLDLNFNA-KPEGYLKILRELAD-FDLFWVEID 247 (409)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECTTCS-CHHHHHHHHHHTTT-SCCSEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCC-CHHHHHHHHHHHhh-cCCeEEEeC
Confidence 44444455555555655 6889998876 79999999887654 688898 44
No 286
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=34.80 E-value=37 Score=28.09 Aligned_cols=29 Identities=21% Similarity=0.226 Sum_probs=23.9
Q ss_pred hcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccC
Q psy969 48 LSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLN 84 (106)
Q Consensus 48 ~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~ 84 (106)
..+.+|.+| ||-+.++|..+.+ +|++++.
T Consensus 341 ~~~~PvivK---gv~~~e~A~~a~~-----aGad~I~ 369 (511)
T 1kbi_A 341 KTKLPIVIK---GVQRTEDVIKAAE-----IGVSGVV 369 (511)
T ss_dssp HCSSCEEEE---EECSHHHHHHHHH-----TTCSEEE
T ss_pred HhCCcEEEE---eCCCHHHHHHHHH-----cCCCEEE
Confidence 357889999 5778999999998 7998753
No 287
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=34.67 E-value=90 Score=23.65 Aligned_cols=53 Identities=15% Similarity=0.073 Sum_probs=34.8
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCc
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDW 82 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w 82 (106)
.+.+.++|+|+ -+.-| . . .+.++.+ ++ .+-++.+| |.+.+++..+.+ .|+|+
T Consensus 81 ~~~a~~~g~d~V~~~~g-~----p-----~~~i~~l----~~----~g~~v~~~----v~~~~~a~~~~~-----~GaD~ 133 (332)
T 2z6i_A 81 VDLVIEEGVKVVTTGAG-N----P-----SKYMERF----HE----AGIIVIPV----VPSVALAKRMEK-----IGADA 133 (332)
T ss_dssp HHHHHHTTCSEEEECSS-C----G-----GGTHHHH----HH----TTCEEEEE----ESSHHHHHHHHH-----TTCSC
T ss_pred HHHHHHCCCCEEEECCC-C----h-----HHHHHHH----HH----cCCeEEEE----eCCHHHHHHHHH-----cCCCE
Confidence 56788999999 76554 1 1 2333333 22 25566666 478999988887 79987
Q ss_pred c
Q psy969 83 L 83 (106)
Q Consensus 83 ~ 83 (106)
+
T Consensus 134 i 134 (332)
T 2z6i_A 134 V 134 (332)
T ss_dssp E
T ss_pred E
Confidence 5
No 288
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=34.31 E-value=96 Score=24.25 Aligned_cols=46 Identities=15% Similarity=0.023 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhhh---cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 34 CGIIMCSAIKHFHKL---SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~---~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.|.+.++++.+. -=..++||. |..++++-++.++.+++.+|.+
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKv--G~~~~~~d~~~v~avR~a~G~~ 219 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRM--GRDDPAVDIETAEAVWDAVGRD 219 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEEC--CCSSHHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEec--CCCCHHHHHHHHHHHHHHhCCC
Confidence 445555555555443 224577776 4567788888888888888875
No 289
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=33.69 E-value=78 Score=23.88 Aligned_cols=21 Identities=24% Similarity=0.237 Sum_probs=17.3
Q ss_pred ceeEeecCCCCCHHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~ 72 (106)
.+-+=.-|||||.+||.++.+
T Consensus 186 ~~pv~vGfGI~~~e~a~~~~~ 206 (235)
T 3w01_A 186 ETQLFYGGGISSEQQATEMAA 206 (235)
T ss_dssp SSEEEEESCCCSHHHHHHHHT
T ss_pred CCCEEEECCcCCHHHHHHHHc
Confidence 455667799999999998876
No 290
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=32.77 E-value=1.1e+02 Score=23.62 Aligned_cols=45 Identities=13% Similarity=0.051 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC-CC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG-PD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG-a~ 81 (106)
.+.|.+.++++.+.-=..+++|. |-.+.++.++.+..+++.+| .+
T Consensus 163 ~e~~~~~a~~~~~~G~~~~K~Kv--g~~~~~~d~~~v~avr~~~g~~~ 208 (377)
T 2pge_A 163 AAFMQEQIEAKLAEGYGCLKLKI--GAIDFDKECALLAGIRESFSPQQ 208 (377)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-----CHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHHHHHHHHHhhhhheeec--CCCChHHHHHHHHHHHHHcCCCC
Confidence 34455555555443335678886 44678999999999999998 54
No 291
>3toe_A MTH10B, DNA/RNA-binding protein ALBA; SAC10B family, alpha/beta mixed, homodimer, unknown function; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=32.38 E-value=1e+02 Score=20.18 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=36.8
Q ss_pred HHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccc
Q psy969 39 CSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS 94 (106)
Q Consensus 39 ~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs 94 (106)
..++..|++ ..++|-|||-| +....|+...+++++.+..+ +......||+..
T Consensus 19 ~~~i~~~n~-g~~eV~ikA~G--~aIskAVdvaei~k~R~~~~-v~v~~I~I~se~ 70 (91)
T 3toe_A 19 LAVVTQMNG-GTSEVILKARG--IAISRAVDVAEIVRNRFIPD-IQIENIDICTEE 70 (91)
T ss_dssp HHHHHHHHT-TCCEEEEEEET--THHHHHHHHHHHHHHHTCTT-CEEEEEEEEEEE
T ss_pred HHHHHHHhC-CCCEEEEEEeh--hHHHHHHHHHHHHHHhccCC-cEEEEEEeeeEE
Confidence 334444442 24789999998 88899999999888777765 555566666643
No 292
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=31.88 E-value=1.2e+02 Score=23.69 Aligned_cols=47 Identities=11% Similarity=0.025 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhhhcCCceeE-eecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGL-KPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgi-KaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.|.+.++++.+.-=..++| |.-.+-.+.++.++.++.+++.+|.+
T Consensus 153 i~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~~~v~avR~a~G~d 200 (394)
T 3mqt_A 153 VEAYKPLIAKAKERGAKAVKVCIIPNDKVSDKEIVAYLRELREVIGWD 200 (394)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHcCCCEEEecccCCCccCHHHHHHHHHHHHHHhCCC
Confidence 334555555554433346777 65222357899999999999999986
No 293
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=31.75 E-value=57 Score=24.59 Aligned_cols=20 Identities=10% Similarity=0.004 Sum_probs=16.3
Q ss_pred ceeEeecCCCCCHHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~ 72 (106)
.+-|=+-|||+|.+++.++ .
T Consensus 202 ~~Pv~vGfGI~t~e~a~~~-~ 221 (271)
T 1ujp_A 202 ALPVAVGFGVSGKATAAQA-A 221 (271)
T ss_dssp CSCEEEESCCCSHHHHHHH-T
T ss_pred CCCEEEEcCCCCHHHHHHh-c
Confidence 3556678999999999997 5
No 294
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=31.64 E-value=56 Score=25.99 Aligned_cols=37 Identities=22% Similarity=-0.046 Sum_probs=29.0
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.++++-+++. .+.++.+|- |-+.++|....+ +|++.+
T Consensus 206 w~~i~~lr~~-------~~~PvivK~---v~~~e~A~~a~~-----~GaD~I 242 (352)
T 3sgz_A 206 WNDLSLLQSI-------TRLPIILKG---ILTKEDAELAMK-----HNVQGI 242 (352)
T ss_dssp HHHHHHHHHH-------CCSCEEEEE---ECSHHHHHHHHH-----TTCSEE
T ss_pred HHHHHHHHHh-------cCCCEEEEe---cCcHHHHHHHHH-----cCCCEE
Confidence 5666666554 578899994 689999999999 799975
No 295
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=31.61 E-value=1e+02 Score=24.05 Aligned_cols=44 Identities=18% Similarity=0.102 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhh-cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 36 IIMCSAIKHFHKL-SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 36 ~lm~~~i~~~~~~-~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.|.+.++++.+. -=..++||. |..++++-++.++++++.+|.+
T Consensus 169 e~~~~~a~~~~~~~G~~~~KlKv--G~~~~~~d~~~v~avR~a~G~~ 213 (383)
T 3toy_A 169 RDDERTLRTACDEHGFRAIKSKG--GHGDLATDEAMIKGLRALLGPD 213 (383)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEEC--CSSCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHccCCcEEEEec--CCCCHHHHHHHHHHHHHHhCCC
Confidence 3444444444333 224567776 4567777888888888888765
No 296
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=31.56 E-value=36 Score=30.29 Aligned_cols=62 Identities=18% Similarity=0.229 Sum_probs=46.0
Q ss_pred hhHHHhhCCCc-----------------ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEee-cCCCCCHH
Q psy969 4 PRKVAFKGSNF-----------------RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKP-AGGISTFE 65 (106)
Q Consensus 4 ~~iai~aGadF-----------------KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKa-aGGIrt~~ 65 (106)
.+.|...|||- =|.-||+...+| -+.+++|++++....+.+++.|-+-- +-|+--.|
T Consensus 94 ~~~aa~~GAd~i~VIRttgQS~~D~v~~gt~eG~gG~~~T-----q~~~r~~RkalD~~~~evgr~i~~~nY~SGl~~pe 168 (763)
T 3kp1_A 94 MRMAAWHGADHIMVIRTAGQSHYDGLIEGTPQGIGGVPIT-----RKQVRAQRKALDLIEEEVGRPINYHSYVSGVAGPD 168 (763)
T ss_dssp HHHHHHTTCCEEECCBSTTGGGCSSCBCSCCCCSSSBCCB-----HHHHHHHHHHHHHHHHHHTSCCEEEEECCSTTHHH
T ss_pred HHHHHHcCCCEEEEecccchhhhccccCCCCCCcCCeehh-----HHHHHHHHHHHHHHHHHhCCeeEEeeeccccccHH
Confidence 56777778874 256677777788 88999999999888888888877642 34576677
Q ss_pred HHHHH
Q psy969 66 DSVRW 70 (106)
Q Consensus 66 ~a~~~ 70 (106)
-|.-+
T Consensus 169 ia~m~ 173 (763)
T 3kp1_A 169 IAVMF 173 (763)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 297
>3v5w_G G gamma-I, guanine nucleotide-binding protein G(I)/G(S)/G(O) gamma-2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Bos taurus} PDB: 1xhm_B 3pvu_G* 3cik_G 3krw_G* 3krx_G* 3psc_G 1omw_G* 3pvw_G* 3uzs_G 1gp2_G* 1gg2_G* 2bcj_G* 3ah8_G* 2qns_B 3kj5_B 3sn6_G*
Probab=30.96 E-value=46 Score=21.46 Aligned_cols=41 Identities=15% Similarity=0.196 Sum_probs=27.1
Q ss_pred cCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccchHHHHHHHHhh
Q psy969 58 AGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLLNNILQELEA 105 (106)
Q Consensus 58 aGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~~~~l~~~l~~ 105 (106)
|-+-.++.+++..++.-+.-++-+ ||=.|...++|++.++.
T Consensus 9 s~~ss~i~q~rk~VeQLr~Ea~i~-------RikVSqaaadL~~yc~~ 49 (77)
T 3v5w_G 9 SNNTASIAQARKLVEQLKMEANID-------RIKVSKAAADLMAYCEA 49 (77)
T ss_dssp -----CHHHHHHHHHHHHHHHSSC-------CCCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHHHhccc-------hhhHHHHHHHHHHHHHh
Confidence 345567778888877777777774 88888888888876653
No 298
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=30.86 E-value=38 Score=26.47 Aligned_cols=21 Identities=33% Similarity=0.330 Sum_probs=18.3
Q ss_pred cCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 58 AGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 58 aGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.|+|-|.++|+..++ +|+|.+
T Consensus 166 ~g~v~t~e~A~~a~~-----aGaD~I 186 (351)
T 2c6q_A 166 AGNVVTGEMVEELIL-----SGADII 186 (351)
T ss_dssp EEEECSHHHHHHHHH-----TTCSEE
T ss_pred EEeCCCHHHHHHHHH-----hCCCEE
Confidence 367999999999999 799865
No 299
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=30.46 E-value=58 Score=27.43 Aligned_cols=21 Identities=14% Similarity=0.096 Sum_probs=18.6
Q ss_pred ceeEeecCCCCCHHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++-|=+.|||+|.++|.++++
T Consensus 291 ~~pvi~~G~i~~~~~a~~~l~ 311 (729)
T 1o94_A 291 KKPVLGVGRYTDPEKMIEIVT 311 (729)
T ss_dssp SSCEECCSCCCCHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHH
Confidence 456778999999999999999
No 300
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=30.35 E-value=52 Score=23.49 Aligned_cols=24 Identities=13% Similarity=0.231 Sum_probs=19.9
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++-|=+.|||+. +++.++++ .|+|
T Consensus 173 ~~pi~v~GGI~~-~ni~~~~~-----aGaD 196 (228)
T 1h1y_A 173 SLDIEVDGGLGP-STIDVAAS-----AGAN 196 (228)
T ss_dssp TSEEEEESSCST-TTHHHHHH-----HTCC
T ss_pred CCCEEEECCcCH-HHHHHHHH-----cCCC
Confidence 566788999998 88888888 4886
No 301
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=29.68 E-value=82 Score=24.22 Aligned_cols=30 Identities=13% Similarity=0.068 Sum_probs=21.9
Q ss_pred ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 52 KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.+.|.+-+|- |.++|+++....++ +|.+|+
T Consensus 187 ~l~vDan~~~-~~~~a~~~~~~l~~-~~i~~i 216 (367)
T 3dg3_A 187 ELYVDGNRGW-SAAESLRAMREMAD-LDLLFA 216 (367)
T ss_dssp EEEEECTTCS-CHHHHHHHHHHTTT-SCCSCE
T ss_pred EEEEECCCCC-CHHHHHHHHHHHHH-hCCCEE
Confidence 5778877776 57888888776544 577887
No 302
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=29.45 E-value=1.7e+02 Score=21.49 Aligned_cols=21 Identities=24% Similarity=0.058 Sum_probs=16.4
Q ss_pred EeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 55 LKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 55 iKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
|=+-+||+|.+++.+ +. .|+|
T Consensus 209 v~vG~GI~t~e~~~~-~~-----~gAD 229 (262)
T 2ekc_A 209 VVVGFGVSKKEHARE-IG-----SFAD 229 (262)
T ss_dssp EEEESSCCSHHHHHH-HH-----TTSS
T ss_pred EEEeCCCCCHHHHHH-HH-----cCCC
Confidence 444789999999999 44 4775
No 303
>3hjz_A Transaldolase B; parachlorococcus, marine, cyanobacteria; HET: MSE; 1.90A {Prochlorococcus marinus str}
Probab=29.43 E-value=2.1e+02 Score=22.62 Aligned_cols=38 Identities=21% Similarity=0.264 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+..+. .|.++++..+-+..|-+| .+|+..+..+ ++|++
T Consensus 207 v~~v~-~i~~~y~~~g~~T~vl~A-SfRn~~~v~~-------laG~d 244 (334)
T 3hjz_A 207 VISVT-QIYKYFKEKGFKTEVMGA-SFRNLDEIKE-------LAGCD 244 (334)
T ss_dssp HHHHH-HHHHHHHHHTCCCEEEEB-CCSSHHHHHH-------TTTCS
T ss_pred HHHHH-HHHHHHHHcCCCCEEEEe-cCCCHHHHHH-------HhCCC
Confidence 45544 344566667888888877 5999998876 26997
No 304
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=29.42 E-value=71 Score=25.39 Aligned_cols=35 Identities=14% Similarity=-0.002 Sum_probs=27.0
Q ss_pred hhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 47 KLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 47 ~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+..++ .+.|.+-+|- |.++|+++....++ +|.+|+
T Consensus 222 ~a~G~d~~l~vDaN~~~-~~~~A~~~~~~L~~-~~i~~i 258 (425)
T 3vcn_A 222 EVLGWDVHLLHDVHHRL-TPIEAARLGKDLEP-YRLFWL 258 (425)
T ss_dssp HHHCSSSEEEEECTTCC-CHHHHHHHHHHHGG-GCCSEE
T ss_pred HHcCCCCEEEEECCCCC-CHHHHHHHHHHHHh-cCCCEE
Confidence 33454 6888998876 79999999887665 589997
No 305
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=29.38 E-value=1.5e+02 Score=22.82 Aligned_cols=43 Identities=7% Similarity=-0.047 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhh-cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 37 IMCSAIKHFHKL-SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 37 lm~~~i~~~~~~-~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.|.+.++++.+. -=..++||. |..+.++-++.++.+++.+|.+
T Consensus 154 ~~~~~a~~~~~~~G~~~~K~Kv--g~~~~~~d~~~v~avR~~~g~~ 197 (372)
T 3tj4_A 154 DLLAGSARAVEEDGFTRLKIKV--GHDDPNIDIARLTAVRERVDSA 197 (372)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEC--CCSSHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHccCCCEEEEcC--CCCCHHHHHHHHHHHHHHcCCC
Confidence 344444444433 235678887 4567888889999999999876
No 306
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=29.28 E-value=1e+02 Score=22.80 Aligned_cols=34 Identities=15% Similarity=0.155 Sum_probs=23.9
Q ss_pred ceeEeecCCCCCHHHHHHHHH--HHHhhCCCCccCCCceeEe
Q psy969 52 KIGLKPAGGISTFEDSVRWIY--LVLIMLGPDWLNKDLFRIG 91 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~--l~~~~lGa~w~~~~~~RiG 91 (106)
.+-|=+-|||+ .+.+..+++ + |++++-.+..-++
T Consensus 187 ~~~I~vdGGI~-~~~~~~~~~~~a-----Gad~~VvGSaIf~ 222 (237)
T 3cu2_A 187 EKLINIDGSMT-LELAKYFKQGTH-----QIDWLVSGSALFS 222 (237)
T ss_dssp GCEEEEESSCC-HHHHHHHHHSSS-----CCCCEEECGGGGS
T ss_pred CceEEEECCcC-HHHHHHHHHhCC-----CCcEEEEeeHHhC
Confidence 57788899998 677877776 5 8875544444444
No 307
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=28.47 E-value=37 Score=26.49 Aligned_cols=25 Identities=20% Similarity=0.165 Sum_probs=23.0
Q ss_pred CCCCCHHHHHHHHHHHHh-hCCCCcc
Q psy969 59 GGISTFEDSVRWIYLVLI-MLGPDWL 83 (106)
Q Consensus 59 GGIrt~~~a~~~i~l~~~-~lGa~w~ 83 (106)
-|-+|.++|+..-.++++ .+|.+|+
T Consensus 81 ag~~ta~eAv~~a~lare~~~~~~~i 106 (265)
T 1wv2_A 81 AGCYDAVEAVRTCRLARELLDGHNLV 106 (265)
T ss_dssp TTCCSHHHHHHHHHHHHTTTTSCCEE
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCeE
Confidence 479999999999999999 8999996
No 308
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=28.46 E-value=1.4e+02 Score=23.03 Aligned_cols=44 Identities=18% Similarity=0.115 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.|.+.++++.+.-=..++||. |+ ++++.++.++++++.+|.+
T Consensus 146 ~e~~~~~a~~~~~~G~~~iKiK~-G~--~~~~d~~~v~avR~a~g~~ 189 (378)
T 3eez_A 146 VEETRAVIDRYRQRGYVAHSVKI-GG--DVERDIARIRDVEDIREPG 189 (378)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEC-CS--CHHHHHHHHHHHTTSCCTT
T ss_pred HHHHHHHHHHHHhCCCCEEEecc-CC--CHHHHHHHHHHHHHHcCCC
Confidence 34455555554433335677777 33 6778888888888888765
No 309
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=28.41 E-value=1.5e+02 Score=23.15 Aligned_cols=47 Identities=9% Similarity=0.027 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhhhcCCceeE-eecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGL-KPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgi-KaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
++.|.+.++++.+.-=..++| |.-..-.+.++.++.++.+++.+|.+
T Consensus 158 ~~~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d 205 (394)
T 3mkc_A 158 IKGYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHD 205 (394)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCC
Confidence 334555555554433346777 55212267899999999999999986
No 310
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=28.01 E-value=1.1e+02 Score=22.53 Aligned_cols=43 Identities=7% Similarity=-0.010 Sum_probs=26.9
Q ss_pred HHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC-CCcc
Q psy969 39 CSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG-PDWL 83 (106)
Q Consensus 39 ~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG-a~w~ 83 (106)
.+.+++.++..+..+.+|.+.++ +.++..++.+.+++ +| ++++
T Consensus 149 ~~ii~~vr~~~~~Pv~vK~~~~~-~~~~~~~~a~~~~~-aG~~d~i 192 (314)
T 2e6f_A 149 RTYLQQVSLAYGLPFGVKMPPYF-DIAHFDTAAAVLNE-FPLVKFV 192 (314)
T ss_dssp HHHHHHHHHHHCSCEEEEECCCC-CHHHHHHHHHHHHT-CTTEEEE
T ss_pred HHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHh-cCCceEE
Confidence 33344444445678999999887 67775555544332 68 8775
No 311
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=27.88 E-value=2.1e+02 Score=22.15 Aligned_cols=45 Identities=9% Similarity=-0.008 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 34 CGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.|.+.++++.+.-=..++||. |+ +.++-++.++++++.+|.+
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKv-G~--~~~~d~~~v~avR~a~g~~ 186 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYV-GK--NLDADEEFLSRVKEEFGSR 186 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEC-SS--CHHHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEee-CC--CHHHHHHHHHHHHHHcCCC
Confidence 344455555544333234567776 32 6777777777777777764
No 312
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=27.76 E-value=1.1e+02 Score=24.16 Aligned_cols=38 Identities=13% Similarity=0.100 Sum_probs=21.9
Q ss_pred CCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHH
Q psy969 30 VCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLV 74 (106)
Q Consensus 30 ~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~ 74 (106)
+|..++.+|++. -...+++=+-||-+.+|+-.++-+++
T Consensus 169 ~vetAiaml~dm-------G~~SvKffPM~Gl~~leEl~avAkAc 206 (275)
T 3m6y_A 169 PIKTAIALVRDM-------GGNSLKYFPMKGLAHEEEYRAVAKAC 206 (275)
T ss_dssp EHHHHHHHHHHH-------TCCEEEECCCTTTTTHHHHHHHHHHH
T ss_pred eHHHHHHHHHHc-------CCCeeeEeecCCcccHHHHHHHHHHH
Confidence 344455555433 34456666667777777666665544
No 313
>1nh9_A MJA10B, DNA-binding protein ALBA; 2.00A {Methanocaldococcus jannaschii} SCOP: d.68.6.1
Probab=26.89 E-value=1.3e+02 Score=19.23 Aligned_cols=51 Identities=12% Similarity=0.232 Sum_probs=35.5
Q ss_pred HHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccc
Q psy969 39 CSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASS 94 (106)
Q Consensus 39 ~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs 94 (106)
..++..|.+ +++|-|||-| +....|....+.+++.+.+. ++.....||+-.
T Consensus 17 ~~~~~~l~~--g~eV~ikA~G--~AIskAV~vaeilk~r~~~~-l~v~~i~i~s~~ 67 (87)
T 1nh9_A 17 VAVLTQLTS--NDEVIIKARG--KAINKAVDVAEMIRNRFIKD-IKIKKIEIGTDK 67 (87)
T ss_dssp HHHHHHHHH--CSEEEEEEEG--GGHHHHHHHHHHHHHHTCTT-CEEEEEEEEEEC
T ss_pred HHHHHHhcC--CCEEEEEEec--hHHHHHHHHHHHHHHhccCC-eEEEEEEEeEEE
Confidence 344444543 3899999999 77788888888888777654 554556677654
No 314
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=26.78 E-value=2.1e+02 Score=22.28 Aligned_cols=48 Identities=8% Similarity=-0.029 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhhcCC--ceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 34 CGIIMCSAIKHFHKLSGK--KIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~--~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+++.-.+.+++.++..++ .+.|-+-+|- |.++|+++.+..++ +|.+|+
T Consensus 192 ~~~~d~~~v~avR~a~g~~~~l~vDaN~~~-~~~~A~~~~~~L~~-~~i~~i 241 (400)
T 4dxk_A 192 DLKSALEPFEKIRKAVGDKMDIMVEFHSMW-QLLPAMQIAKALTP-YQTFWH 241 (400)
T ss_dssp HHHHHHHHHHHHHHHHGGGSEEEEECTTCB-CHHHHHHHHHHTGG-GCCSEE
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEECCCCC-CHHHHHHHHHHHhh-cCCCEE
Confidence 333333344444444554 6888988876 79999999887655 588887
No 315
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=26.78 E-value=1.7e+02 Score=22.30 Aligned_cols=29 Identities=17% Similarity=0.081 Sum_probs=16.2
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..++||... .++++.++.++.+++.+|.+
T Consensus 162 ~~iKik~g~--~~~~~~~e~v~avr~a~g~~ 190 (378)
T 2qdd_A 162 RTHSAKIGG--SDPAQDIARIEAISAGLPDG 190 (378)
T ss_dssp CEEEEECCS--SCHHHHHHHHHHHHHSCCTT
T ss_pred hheeecCCC--CChHHHHHHHHHHHHHhCCC
Confidence 345555422 25566666666666666654
No 316
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=26.57 E-value=49 Score=25.73 Aligned_cols=59 Identities=8% Similarity=-0.090 Sum_probs=33.0
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHH
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYL 73 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l 73 (106)
++...+.|.|| -.+.|....... ...-++-.+.+++. ....+ +.||+.|.++|.+.|+-
T Consensus 247 ~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~a~~ik~~-------~~~~v---~~~g~~~~~~ae~~l~~ 306 (358)
T 4a3u_A 247 AKMLSDLDIAFLGMREGAVDGTFG-KTDQPKLSPEIRKV-------FKPPL---VLNQDYTFETAQAALDS 306 (358)
T ss_dssp HHHHHHHTCSEEEEECCBTTCSSS-BCSSCCCHHHHHHH-------CCSCE---EEESSCCHHHHHHHHHH
T ss_pred HHhhhccCccccccccccccCccc-ccccHHHHHHHHHh-------cCCcE---EEeCCCCHHHHHHHHHc
Confidence 34456779999 666664322111 00002333333332 34444 35899999999999983
No 317
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=26.22 E-value=1.9e+02 Score=21.90 Aligned_cols=42 Identities=14% Similarity=0.138 Sum_probs=27.4
Q ss_pred HHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 38 MCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 38 m~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
|.+.++++.+.--..++||. |..+.++-++.++++++.+|.+
T Consensus 120 ~~~~a~~~~~~G~~~~KiKv--g~~~~~~d~~~v~avr~~~g~~ 161 (332)
T 2ozt_A 120 ALEQWQQSWQRGQTTFKWKV--GVMSPEEEQAILKALLAALPPG 161 (332)
T ss_dssp HHHHHHHHHHTTCCEEEEEC--SSSCHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHcCCcEEEEEe--CCCChHHHHHHHHHHHHHcCCC
Confidence 34444444332224577887 4567888889999999999875
No 318
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=26.06 E-value=1.8e+02 Score=22.61 Aligned_cols=62 Identities=16% Similarity=0.078 Sum_probs=40.1
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+..++.|.|- =||-|.. .. ++-+..+++.+++ .++++-|=+-|||+.-.- .++++. +|++++
T Consensus 173 e~Li~lGvdrILTSG~~~---~a-----~~Gl~~Lk~Lv~~----a~~rI~ImaGGGV~~~Ni-~~l~~~----tG~~~~ 235 (287)
T 3iwp_A 173 ETLLTLGFERVLTSGCDS---SA-----LEGLPLIKRLIEQ----AKGRIVVMPGGGITDRNL-QRILEG----SGATEF 235 (287)
T ss_dssp HHHHHHTCSEEEECTTSS---ST-----TTTHHHHHHHHHH----HTTSSEEEECTTCCTTTH-HHHHHH----HCCSEE
T ss_pred HHHHHcCCCEEECCCCCC---Ch-----HHhHHHHHHHHHH----hCCCCEEEECCCcCHHHH-HHHHHh----hCCCEE
Confidence 4556678888 8876632 12 5566666665543 367899999999986554 444432 477654
No 319
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=25.26 E-value=2.2e+02 Score=21.38 Aligned_cols=69 Identities=19% Similarity=0.174 Sum_probs=0.0
Q ss_pred hhhHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 3 RPRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 3 ~~~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.++-+.+.|-+. |---|- + ++....+.+++++. --.-.+.|-+-||- |.++|+++++..++ +|.+
T Consensus 146 ~a~~~~~~Gf~~iKik~g~-----~-----~~~d~~~v~avr~~--g~~~~l~vDan~~~-~~~~a~~~~~~l~~-~~i~ 211 (345)
T 2zad_A 146 EAKKIFEEGFRVIKIKVGE-----N-----LKEDIEAVEEIAKV--TRGAKYIVDANMGY-TQKEAVEFARAVYQ-KGID 211 (345)
T ss_dssp HHHHHHHTTCSEEEEECCS-----C-----HHHHHHHHHHHHHH--STTCEEEEECTTCS-CHHHHHHHHHHHHH-TTCC
T ss_pred HHHHHHHcCcCEEEEeecC-----C-----HHHHHHHHHHHHhh--CCCCeEEEECCCCC-CHHHHHHHHHHHHh-cCCC
Q ss_pred --cc-CC
Q psy969 82 --WL-NK 85 (106)
Q Consensus 82 --w~-~~ 85 (106)
|+ +|
T Consensus 212 ~~~iE~P 218 (345)
T 2zad_A 212 IAVYEQP 218 (345)
T ss_dssp CSEEECC
T ss_pred eeeeeCC
No 320
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=24.91 E-value=72 Score=24.49 Aligned_cols=52 Identities=13% Similarity=0.031 Sum_probs=32.0
Q ss_pred HhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHH
Q psy969 8 AFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 8 i~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~ 72 (106)
+++|||| -|=--|- ++...-+.+.+++..-..+=-.||.+ |.++.++..|-+
T Consensus 170 v~aGAdf~iTQ~ffD----------~~~~~~f~~~~r~~Gi~vPIi~GImP---i~s~~~~~~~~~ 222 (310)
T 3apt_A 170 VEAGLDFAITQLFFN----------NAHYFGFLERARRAGIGIPILPGIMP---VTSYRQLRRFTE 222 (310)
T ss_dssp HHHHCSEEEECCCSC----------HHHHHHHHHHHHHTTCCSCEECEECC---CCCTTHHHHHHH
T ss_pred HHcCCCEEEecccCC----------HHHHHHHHHHHHHcCCCCeEEEEecc---cCCHHHHHHHHH
Confidence 5799999 9887764 56666666665432100122345553 678888887755
No 321
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=24.82 E-value=1.4e+02 Score=22.79 Aligned_cols=45 Identities=13% Similarity=0.084 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.|.+.++++.+.-=..++||.. -.++++.++.++++++.+|.+
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKik~g--~~~~~~~~e~v~avr~a~G~d 191 (371)
T 2ovl_A 147 VADLKTQADRFLAGGFRAIKMKVG--RPDLKEDVDRVSALREHLGDS 191 (371)
T ss_dssp HHHHHHHHHHHHHTTCSCEEEECC--CSSHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCC--CCCHHHHHHHHHHHHHHhCCC
Confidence 344555555554433356788863 348889999999999999875
No 322
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=24.68 E-value=2e+02 Score=22.23 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=21.5
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..++||. |-.+.++-++.++.+++.+|.+
T Consensus 166 ~~~K~Kv--g~~~~~~d~~~v~avR~a~g~~ 194 (383)
T 3i4k_A 166 RSFKLKM--GAGDPAEDTRRVAELAREVGDR 194 (383)
T ss_dssp SEEEEEC--CSSCHHHHHHHHHHHHHTTTTT
T ss_pred cEEEEee--CCCCHHHHHHHHHHHHHHcCCC
Confidence 4567776 4467888888888888888865
No 323
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=24.66 E-value=1.6e+02 Score=22.09 Aligned_cols=72 Identities=7% Similarity=-0.086 Sum_probs=44.5
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
+..++.|.|- =||=|... . ++.+-+..+++-+++ .++++.|=+-|||+.-+- .++++. +|..++
T Consensus 140 e~L~~lGv~rILTSG~~~~--~----~a~~g~~~L~~Lv~~----a~~ri~Im~GgGV~~~Ni-~~l~~~----tGv~e~ 204 (224)
T 2bdq_A 140 DQLVALGFTRILLHGSSNG--E----PIIENIKHIKALVEY----ANNRIEIMVGGGVTAENY-QYICQE----TGVKQA 204 (224)
T ss_dssp HHHHHTTCCEEEECSCSSC--C----CGGGGHHHHHHHHHH----HTTSSEEEECSSCCTTTH-HHHHHH----HTCCEE
T ss_pred HHHHHcCCCEEECCCCCCC--C----cHHHHHHHHHHHHHh----hCCCeEEEeCCCCCHHHH-HHHHHh----hCCCEE
Confidence 4567779888 88877532 1 235556666655543 467899999999986543 345533 588766
Q ss_pred CCCceeEe
Q psy969 84 NKDLFRIG 91 (106)
Q Consensus 84 ~~~~~RiG 91 (106)
.-.....+
T Consensus 205 H~s~i~~~ 212 (224)
T 2bdq_A 205 HGTRITQM 212 (224)
T ss_dssp EETTCC--
T ss_pred ccccccCC
Confidence 54333333
No 324
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=24.59 E-value=1.7e+02 Score=22.88 Aligned_cols=44 Identities=11% Similarity=0.120 Sum_probs=26.4
Q ss_pred HHHHHHH-HHHhhhcCCceeEeecCCCC------CHHHHHHHHHHHHhhCCCC
Q psy969 36 IIMCSAI-KHFHKLSGKKIGLKPAGGIS------TFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 36 ~lm~~~i-~~~~~~~~~~vgiKaaGGIr------t~~~a~~~i~l~~~~lGa~ 81 (106)
+.|.+.+ +++.+.-=..++||. |.. ++++.++.++.+++.+|.+
T Consensus 141 e~~~~~a~~~~~~~G~~~~KlKv--G~~~~~~~~~~~~d~~~v~avR~a~g~~ 191 (393)
T 4dwd_A 141 DEVVREVARRVEAEQPAAVKIRW--DGDRTRCDVDIPGDIAKARAVRELLGPD 191 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEC--CCCTTCCSCCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcc--CCCCcccccCHHHHHHHHHHHHHHhCCC
Confidence 3344444 444333234677776 333 6788888888888887765
No 325
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=23.78 E-value=2.3e+02 Score=21.09 Aligned_cols=45 Identities=11% Similarity=-0.037 Sum_probs=30.3
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG 79 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG 79 (106)
++.+.-+.+.+.+ .--..+.|+=.-|+-++++..++++.+++...
T Consensus 155 ~~~~~~~~~~~~~---~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~ 199 (298)
T 2cw6_A 155 PAKVAEVTKKFYS---MGCYEISLGDTIGVGTPGIMKDMLSAVMQEVP 199 (298)
T ss_dssp HHHHHHHHHHHHH---TTCSEEEEEETTSCCCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHH---cCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC
Confidence 4444444444333 33457888888899999999999888776663
No 326
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=23.49 E-value=2.1e+02 Score=21.74 Aligned_cols=46 Identities=17% Similarity=0.007 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhhcCCceeEeecCC----CCCHHHHHHHHHHHHhhCCCC
Q psy969 36 IIMCSAIKHFHKLSGKKIGLKPAGG----ISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 36 ~lm~~~i~~~~~~~~~~vgiKaaGG----Irt~~~a~~~i~l~~~~lGa~ 81 (106)
+.|.+.++++.+.-=..++||...+ ..+.+..++.++.+++.+|.+
T Consensus 151 e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d 200 (382)
T 1rvk_A 151 EDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPD 200 (382)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCC
Confidence 3444555444333335688887432 237888999999999988876
No 327
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=23.31 E-value=2.2e+02 Score=21.84 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 36 IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 36 ~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.|.+.++++.+.-=..++||+. -.++++.++.++.+++.+|.+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g--~~~~~~d~e~v~avR~a~G~d 184 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIG--GTSFKEDVRHINALQHTAGSS 184 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECS--SSCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCC--CCCHHHHHHHHHHHHHhhCCC
Confidence 44444444443322245666653 246777777777777777765
No 328
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=23.18 E-value=88 Score=23.71 Aligned_cols=36 Identities=14% Similarity=0.026 Sum_probs=25.4
Q ss_pred hHHHhhCCCc-ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHh
Q psy969 5 RKVAFKGSNF-RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFH 46 (106)
Q Consensus 5 ~iai~aGadF-KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~ 46 (106)
+-+++.|-+. -++.|- ++.+. +|.++.|.+++++|+
T Consensus 311 ~~~l~~~g~I~~~Ghgi-~p~tp-----~env~a~v~av~ey~ 347 (348)
T 4ay7_A 311 KEALEGGIDVLAPGCGI-APMTP-----LENVKALVAARDEFY 347 (348)
T ss_dssp HHHHHTTCSEEEESSSC-CTTCC-----HHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCEEeCCCcc-CCCCC-----HHHHHHHHHHHHHhc
Confidence 3445555444 667774 56778 889999999998885
No 329
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.13 E-value=2.4e+02 Score=21.43 Aligned_cols=41 Identities=15% Similarity=0.128 Sum_probs=29.2
Q ss_pred cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc---CCCceeE
Q psy969 49 SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL---NKDLFRI 90 (106)
Q Consensus 49 ~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~---~~~~~Ri 90 (106)
.++++-|=+-=|=.+.++++++.+.+++ +|++.+ .|..++.
T Consensus 88 ~~grvpViaGvg~~st~~ai~la~~A~~-~Gadavlv~~P~y~~~ 131 (315)
T 3si9_A 88 VAKRVPVVAGAGSNSTSEAVELAKHAEK-AGADAVLVVTPYYNRP 131 (315)
T ss_dssp HTTSSCBEEECCCSSHHHHHHHHHHHHH-TTCSEEEEECCCSSCC
T ss_pred hCCCCcEEEeCCCCCHHHHHHHHHHHHh-cCCCEEEECCCCCCCC
Confidence 4566655442244678999999988877 699883 7877775
No 330
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=23.12 E-value=1.7e+02 Score=22.54 Aligned_cols=44 Identities=14% Similarity=-0.081 Sum_probs=29.3
Q ss_pred HHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 36 IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 36 ~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.|.+.++++.+.-=..++||+.+ .+.+..++.++++++.+|.+
T Consensus 164 e~~~~~a~~~~~~Gf~~vKik~g~--~~~~~~~e~v~avR~avg~d 207 (393)
T 2og9_A 164 DQLMVNASASIERGIGGIKLKVGQ--PDGALDIARVTAVRKHLGDA 207 (393)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCC--SCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHcCCCEEEEecCC--CCHHHHHHHHHHHHHHcCCC
Confidence 334444444433333567888743 46888999999999998876
No 331
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=22.91 E-value=1.5e+02 Score=22.82 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.|.+.++++.+.-=..++||+. .++++.++.++++++.+|.+
T Consensus 146 ~e~~~~~a~~~~~~Gf~~vKik~g---~~~~~~~e~v~avR~a~g~d 189 (397)
T 2qde_A 146 PEAVAEEALAVLREGFHFVKLKAG---GPLKADIAMVAEVRRAVGDD 189 (397)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEECC---SCHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhhhhheeeccc---CCHHHHHHHHHHHHHhhCCC
Confidence 445555555554433356888874 37788899999999998875
No 332
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=22.82 E-value=1.5e+02 Score=23.21 Aligned_cols=46 Identities=9% Similarity=-0.094 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCC-CC
Q psy969 34 CGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLG-PD 81 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lG-a~ 81 (106)
+.+.|.+.++++.+.-=..++||. |.+++++-++.++++++.+| .+
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKv--g~~~~~~d~~~v~avR~a~gg~~ 210 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKI--GGRPVEIDIETVRKVWERIRGTG 210 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--CSSCHHHHHHHHHHHHHHHTTTT
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcC--CCCCHHHHHHHHHHHHHHhCCCC
Confidence 344555555555433334677787 44678888888888888777 54
No 333
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=22.76 E-value=1.7e+02 Score=22.66 Aligned_cols=28 Identities=18% Similarity=0.144 Sum_probs=16.1
Q ss_pred CceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 51 KKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 51 ~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
..++||. |. +.++.++.++.+++.+|.+
T Consensus 168 ~~iKiKv-G~--~~~~d~~~v~avR~a~g~d 195 (389)
T 3ozy_A 168 TAAKLKV-GR--APRKDAANLRAMRQRVGAD 195 (389)
T ss_dssp SEEEEEC-CS--CHHHHHHHHHHHHHHHCTT
T ss_pred CEEeecc-CC--CHHHHHHHHHHHHHHcCCC
Confidence 3455664 22 5666666666666666654
No 334
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=22.70 E-value=2e+02 Score=21.95 Aligned_cols=44 Identities=14% Similarity=-0.047 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 34 CGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.|.+.++++.+.-=..+.||..+ +.+..++.++.+++.+| +
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~---~~~~~~e~v~avr~a~g-d 190 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGR---GEKLDLEITAAVRGEIG-D 190 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCS---CHHHHHHHHHHHHTTST-T
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCC---CHHHHHHHHHHHHHHcC-C
Confidence 34445666555544333568888743 78888999999999998 5
No 335
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=22.66 E-value=1.1e+02 Score=23.52 Aligned_cols=48 Identities=13% Similarity=0.045 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhhhcCCceeEeecC----CC------------CCHHHHHHHHHHHHhhCCCC
Q psy969 34 CGIIMCSAIKHFHKLSGKKIGLKPAG----GI------------STFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~~vgiKaaG----GI------------rt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.|.+.++++.+.-=..++||..| |- +.+++.++.++++++.+|.+
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d 209 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPD 209 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCC
Confidence 34445555555443333568888762 33 35677888999999988876
No 336
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=22.55 E-value=1.2e+02 Score=22.92 Aligned_cols=69 Identities=16% Similarity=0.149 Sum_probs=46.1
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhh-c----CCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEe
Q psy969 17 LHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKL-S----GKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 91 (106)
Q Consensus 17 STG~~~~gat~~~~~~~~v~lm~~~i~~~~~~-~----~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiG 91 (106)
.||+ .|| +++++.+...||++-.. . ...+.|=--|+|+. +.+.+++.+ -+ -+-+-+|
T Consensus 172 GTG~---~At-----pe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~-~N~~~l~~~----~d-----iDG~LVG 233 (250)
T 1yya_A 172 GTGK---NAT-----PEDAEAMHQAIRKALSERYGEAFASRVRILYGGSVNP-KNFADLLSM----PN-----VDGGLVG 233 (250)
T ss_dssp SSSC---CCC-----HHHHHHHHHHHHHHHHHHHCHHHHTTCEEEEESSCCT-TTHHHHHTS----TT-----CCEEEES
T ss_pred CCCC---CCC-----HHHHHHHHHHHHHHHHHhcCccccCceeEEEcCCCCH-HHHHHHHcC----CC-----CCeeEee
Confidence 4553 478 99999999999876221 1 24577777788888 999999873 12 3456787
Q ss_pred ccchHH-HHHHHH
Q psy969 92 ASSLLN-NILQEL 103 (106)
Q Consensus 92 tSs~~~-~l~~~l 103 (106)
..|+.. .+.+.+
T Consensus 234 gAsL~a~~F~~ii 246 (250)
T 1yya_A 234 GASLELESFLALL 246 (250)
T ss_dssp GGGSSHHHHHHHH
T ss_pred HHHhChHHHHHHH
Confidence 777643 344433
No 337
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=22.44 E-value=48 Score=27.55 Aligned_cols=21 Identities=19% Similarity=0.147 Sum_probs=18.1
Q ss_pred ceeEeecCCCCCHHHHHHHHH
Q psy969 52 KIGLKPAGGISTFEDSVRWIY 72 (106)
Q Consensus 52 ~vgiKaaGGIrt~~~a~~~i~ 72 (106)
++-|=+.|||+|.++|.++++
T Consensus 294 ~~pvi~~G~i~~~~~a~~~l~ 314 (690)
T 3k30_A 294 TKPVVGVGRFTSPDAMVRQIK 314 (690)
T ss_dssp SSCEEECSCCCCHHHHHHHHH
T ss_pred CCeEEEeCCCCCHHHHHHHHH
Confidence 355667899999999999998
No 338
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=22.20 E-value=1.6e+02 Score=22.02 Aligned_cols=69 Identities=19% Similarity=0.037 Sum_probs=43.2
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEeccchH
Q psy969 17 LHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIGASSLL 96 (106)
Q Consensus 17 STG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiGtSs~~ 96 (106)
.||+ .|| +++++.+...||++. ...+.|=--|+|+.-+.+.-+.. .+. +-+-+|..|+.
T Consensus 164 GTG~---~At-----~e~a~ev~~~IR~~l---~~~vrIlYGGSV~~~N~~~l~~~-----~di-----DG~LVGgAsl~ 222 (233)
T 2jgq_A 164 GTKK---SAS-----LEDIYLTHGFLKQIL---NQKTPLLYGGSVNTQNAKEILGI-----DSV-----DGLLIGSASWE 222 (233)
T ss_dssp TC-----CCC-----HHHHHHHHHHHHHHS---CTTSCEEEESSCCTTTHHHHHTS-----TTC-----CEEEESGGGGS
T ss_pred CCCC---CCC-----HHHHHHHHHHHHHHH---hcCCcEEEcCCcChhhHHHHhcC-----CCC-----CeeEecHHHhC
Confidence 4553 478 999999999998763 24566666677776655544433 233 45678777765
Q ss_pred H-HHHHHHhhC
Q psy969 97 N-NILQELEAL 106 (106)
Q Consensus 97 ~-~l~~~l~~~ 106 (106)
. .+.+.++.|
T Consensus 223 a~~f~~ii~~~ 233 (233)
T 2jgq_A 223 LENFKTIISFL 233 (233)
T ss_dssp HHHHHHHHTTC
T ss_pred hHHHHHHHHhC
Confidence 4 466665543
No 339
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=22.11 E-value=1.2e+02 Score=23.46 Aligned_cols=47 Identities=13% Similarity=0.032 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHhhhcCCceeEeecC----CC------------CCHHHHHHHHHHHHhhCCCC
Q psy969 35 GIIMCSAIKHFHKLSGKKIGLKPAG----GI------------STFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~vgiKaaG----GI------------rt~~~a~~~i~l~~~~lGa~ 81 (106)
.+.|.+.++++.+.-=..++||.++ |- ...++.++.++++++.+|.+
T Consensus 153 ~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d 215 (407)
T 2o56_A 153 PEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPD 215 (407)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCC
Confidence 3344444444433333568888763 43 35677888999999988876
No 340
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=21.49 E-value=2.7e+02 Score=21.08 Aligned_cols=65 Identities=12% Similarity=-0.155 Sum_probs=43.5
Q ss_pred hHHHhhCCCc---ccCCCCCCCCCCCCCCCchHHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 5 RKVAFKGSNF---RTLHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 5 ~iai~aGadF---KTSTG~~~~gat~~~~~~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+...++||+. -|-.+|.. -+ +++++.+++. ++-.|-.| +.|.+..|..+... +|++
T Consensus 86 ~~y~~~GA~~IsVltd~~~f~--Gs-----~~~L~~ir~~-------v~lPVl~K--dfi~d~~qi~ea~~-----~GAD 144 (272)
T 3tsm_A 86 KAYEEGGAACLSVLTDTPSFQ--GA-----PEFLTAARQA-------CSLPALRK--DFLFDPYQVYEARS-----WGAD 144 (272)
T ss_dssp HHHHHTTCSEEEEECCSTTTC--CC-----HHHHHHHHHT-------SSSCEEEE--SCCCSTHHHHHHHH-----TTCS
T ss_pred HHHHHCCCCEEEEeccccccC--CC-----HHHHHHHHHh-------cCCCEEEC--CccCCHHHHHHHHH-----cCCC
Confidence 4556789988 45555532 36 7777777654 35567667 58999999888887 7996
Q ss_pred ccCCCceeEeccch
Q psy969 82 WLNKDLFRIGASSL 95 (106)
Q Consensus 82 w~~~~~~RiGtSs~ 95 (106)
..-++++.+
T Consensus 145 -----~VlLi~a~L 153 (272)
T 3tsm_A 145 -----CILIIMASV 153 (272)
T ss_dssp -----EEEEETTTS
T ss_pred -----EEEEccccc
Confidence 223566654
No 341
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=21.24 E-value=2.5e+02 Score=20.96 Aligned_cols=72 Identities=18% Similarity=0.095 Sum_probs=46.1
Q ss_pred hhHHHhhCCCc-ccCCCCCCCCCCCCCCCchH-HHHHHHHHHHHhh-hcCCceeEeecCCCCCHHHHHHHHHHHHhhCCC
Q psy969 4 PRKVAFKGSNF-RTLHGRGPDSTSYGNVCNTC-GIIMCSAIKHFHK-LSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 4 ~~iai~aGadF-KTSTG~~~~gat~~~~~~~~-v~lm~~~i~~~~~-~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa 80 (106)
.+.|+++|.+| =|.--|+ + .+. -+.+++.+++..- .-...+.-|.-..-.+.+..++-++...+.||.
T Consensus 71 v~~Al~~Gi~~~DTA~~Yg----n-----E~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~~~~~~~~~~~~e~SL~rL~~ 141 (314)
T 3b3d_A 71 VKTAIVHGYRSIDTAAIYG----N-----EAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAFETSLSKLGL 141 (314)
T ss_dssp HHHHHHHTCCEEECCGGGT----C-----HHHHHHHHHHHHHHHTCCGGGCEEEEEECGGGCSHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCEEECccccC----C-----hHHHHHHHHHHHHHhCCCcccccccccCcCCCCCHHHHHHHHHHHHHHhCC
Confidence 46789999999 9999885 2 222 2344444433200 001124456655566788888888888888999
Q ss_pred CccC
Q psy969 81 DWLN 84 (106)
Q Consensus 81 ~w~~ 84 (106)
|+++
T Consensus 142 dyiD 145 (314)
T 3b3d_A 142 DYLD 145 (314)
T ss_dssp SCEE
T ss_pred Cccc
Confidence 8764
No 342
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=20.95 E-value=2.5e+02 Score=21.11 Aligned_cols=46 Identities=9% Similarity=0.096 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 34 CGIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 34 ~v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.+.|.+.++++.+.--..++||. |-.+++..++.++.+++.+|.+
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~ 189 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRI--GYPALDQDLAVVRSIRQAVGDD 189 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEC--CCSSHHHHHHHHHHHHHHHCSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHHHHHHHHhCCC
Confidence 445566666655443335677886 3357888999999999999876
No 343
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=20.95 E-value=99 Score=23.55 Aligned_cols=70 Identities=17% Similarity=0.214 Sum_probs=43.9
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhh-----cCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCccCCCceeEe
Q psy969 17 LHGRGPDSTSYGNVCNTCGIIMCSAIKHFHKL-----SGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWLNKDLFRIG 91 (106)
Q Consensus 17 STG~~~~gat~~~~~~~~v~lm~~~i~~~~~~-----~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~~~~~~RiG 91 (106)
.||+ .|| +++++.+...|+++-.. ..+.+.|=--|+|+.-+.+ +++.. .+ -+-+-+|
T Consensus 175 GTG~---~At-----pe~aqevh~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~-~l~~~----~d-----iDG~LVG 236 (255)
T 3qst_A 175 GTGK---VAS-----TQDAQEMCKVIRDILAAKVGADIANKVRILYGGSVKPNNCN-ELAAC----PD-----VDGFLVG 236 (255)
T ss_dssp SSSC---CCC-----HHHHHHHHHHHHHHHHHHHCHHHHHHCEEEECSCCCTTTHH-HHHHS----TT-----CCEEEEC
T ss_pred cCCC---CCC-----HHHHHHHHHHHHHHHHHhcChhhcCcccEEEcCCcCHhHHH-HHhcC----CC-----CCEEEee
Confidence 4665 388 99999999999876221 2345677666667665544 44442 23 3456788
Q ss_pred ccchHHHHHHHHh
Q psy969 92 ASSLLNNILQELE 104 (106)
Q Consensus 92 tSs~~~~l~~~l~ 104 (106)
..|+-+.+.+.+.
T Consensus 237 gASL~~~F~~Ii~ 249 (255)
T 3qst_A 237 GASLEAGFINIVN 249 (255)
T ss_dssp GGGGSTTHHHHHG
T ss_pred HHHhhHHHHHHHH
Confidence 8877665555443
No 344
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=20.82 E-value=2.8e+02 Score=21.08 Aligned_cols=43 Identities=12% Similarity=0.204 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 36 IIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 36 ~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
+.|.+.++++.+.-=..++||+.. ++++.++.++.+++.+|.+
T Consensus 147 ~~~~~~a~~~~~~Gf~~iKik~g~---~~~~~~e~v~avr~a~g~d 189 (379)
T 2rdx_A 147 AETRAELARHRAAGYRQFQIKVGA---DWQSDIDRIRACLPLLEPG 189 (379)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCS---CHHHHHHHHHHHGGGSCTT
T ss_pred HHHHHHHHHHHHcCCCEEEEeccC---CHHHHHHHHHHHHHhcCCC
Confidence 334444444433333567888743 7899999999999999976
No 345
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=20.78 E-value=1.2e+02 Score=23.28 Aligned_cols=43 Identities=9% Similarity=0.132 Sum_probs=26.5
Q ss_pred HHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 37 IMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 37 lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.|.+.++++.+.-=..+++|. |-.+.++-++.++.+++.+|.+
T Consensus 149 ~~~~~a~~~~~~G~~~~K~Kv--g~~~~~~d~~~v~avR~~~g~~ 191 (377)
T 3my9_A 149 ADLERMRAMVPAGHTVFKMKT--GVKPHAEELRILETMRGEFGER 191 (377)
T ss_dssp HHHHHHHHHTTTTCCEEEEEC--SSSCHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHcCCCEEEEcc--CCCcHHHHHHHHHHHHHHhCCC
Confidence 334444444333224577776 4567777788888888888764
No 346
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.77 E-value=2.8e+02 Score=20.97 Aligned_cols=73 Identities=7% Similarity=-0.081 Sum_probs=41.5
Q ss_pred HHhhCCCcccCCCCCCCCCCCCCCCchH---HHHHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 7 VAFKGSNFRTLHGRGPDSTSYGNVCNTC---GIIMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 7 ai~aGadFKTSTG~~~~gat~~~~~~~~---v~lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
.++.|+|. ....|+|.|.+-+.. .+++..+++ ..++++-|=+-=| .+.++++++.+.+++. |++.+
T Consensus 42 li~~Gv~G-----l~v~GtTGE~~~Ls~eEr~~v~~~~v~----~~~grvpViaGvg-~~t~~ai~la~~A~~~-Gadav 110 (316)
T 3e96_A 42 IVDNGIDV-----IVPCGNTSEFYALSLEEAKEEVRRTVE----YVHGRALVVAGIG-YATSTAIELGNAAKAA-GADAV 110 (316)
T ss_dssp HHTTTCCE-----ECTTSGGGTGGGSCHHHHHHHHHHHHH----HHTTSSEEEEEEC-SSHHHHHHHHHHHHHH-TCSEE
T ss_pred HHHcCCCE-----EEeCccccCcccCCHHHHHHHHHHHHH----HhCCCCcEEEEeC-cCHHHHHHHHHHHHhc-CCCEE
Confidence 34566654 333344444443443 444443333 2456655443225 4899999999888774 99884
Q ss_pred ---CCCceeE
Q psy969 84 ---NKDLFRI 90 (106)
Q Consensus 84 ---~~~~~Ri 90 (106)
.|..++.
T Consensus 111 lv~~P~y~~~ 120 (316)
T 3e96_A 111 MIHMPIHPYV 120 (316)
T ss_dssp EECCCCCSCC
T ss_pred EEcCCCCCCC
Confidence 5766554
No 347
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=20.63 E-value=58 Score=26.74 Aligned_cols=34 Identities=12% Similarity=0.096 Sum_probs=0.0
Q ss_pred hhHHHhhCCCc--ccCCCCCCCCCCCCCCCchHHHHHHH
Q psy969 4 PRKVAFKGSNF--RTLHGRGPDSTSYGNVCNTCGIIMCS 40 (106)
Q Consensus 4 ~~iai~aGadF--KTSTG~~~~gat~~~~~~~~v~lm~~ 40 (106)
+..|+++|||. -|-.|++.. .||++.|++-.+++
T Consensus 219 ~laAv~AGa~~VD~ti~g~ger---tGN~~lE~lv~~L~ 254 (464)
T 2nx9_A 219 LLKAIEAGVDRVDTAISSMSGT---YGHPATESLVATLQ 254 (464)
T ss_dssp HHHHHHTTCSEEEEBCGGGCST---TSCCBHHHHHHHHT
T ss_pred HHHHHHhCCCEEEEeccccCCC---CcCHHHHHHHHHHH
No 348
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=20.18 E-value=1.7e+02 Score=22.83 Aligned_cols=48 Identities=10% Similarity=0.079 Sum_probs=31.8
Q ss_pred chHHHHHHHHHHHHhhhcCCceeEeecCCCC--------CHHHHHHHHHHHHhhCCCC
Q psy969 32 NTCGIIMCSAIKHFHKLSGKKIGLKPAGGIS--------TFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 32 ~~~v~lm~~~i~~~~~~~~~~vgiKaaGGIr--------t~~~a~~~i~l~~~~lGa~ 81 (106)
+++++.|.+.++++.+.-=..++||. |.. ++++-++.++++++.+|.+
T Consensus 146 ~~~~e~~~~~a~~~~~~Gf~~~KlKv--g~~~~~~~~~~~~~~d~~~v~avR~a~g~~ 201 (392)
T 3v5c_A 146 RAAVALMQEEAMQGYAKGQRHFKIKV--GRGGRHMPLWEGTKRDIAIVRGISEVAGPA 201 (392)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEC--CTTTTTSCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHHHCCCCEEEECC--CCCCccccccccHHHHHHHHHHHHHHcCCC
Confidence 34566777766665443335678886 332 3678888888888888875
No 349
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=20.09 E-value=2.2e+02 Score=22.12 Aligned_cols=42 Identities=12% Similarity=0.103 Sum_probs=26.2
Q ss_pred HHHHHHHHHhhhcCCceeEeecCCCCCHHHHHHHHHHHHhhCCCC
Q psy969 37 IMCSAIKHFHKLSGKKIGLKPAGGISTFEDSVRWIYLVLIMLGPD 81 (106)
Q Consensus 37 lm~~~i~~~~~~~~~~vgiKaaGGIrt~~~a~~~i~l~~~~lGa~ 81 (106)
.|.+.++++.+.-=..++||. | . ++++-++.++++++.+|.+
T Consensus 145 ~~~~~a~~~~~~Gf~~~KlK~-g-~-~~~~d~~~v~avR~a~g~~ 186 (379)
T 3r0u_A 145 ETIQNIQNGVEANFTAIKVKT-G-A-DFNRDIQLLKALDNEFSKN 186 (379)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC-S-S-CHHHHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHcCCCEEeeec-C-C-CHHHHHHHHHHHHHhcCCC
Confidence 344444444332234677776 3 2 7788888888888888864
No 350
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=20.06 E-value=2.2e+02 Score=21.61 Aligned_cols=18 Identities=17% Similarity=0.056 Sum_probs=9.3
Q ss_pred CHHHHHHHHHHHHhhCCC
Q psy969 63 TFEDSVRWIYLVLIMLGP 80 (106)
Q Consensus 63 t~~~a~~~i~l~~~~lGa 80 (106)
+.+..++.++.+++.+|.
T Consensus 172 ~~~~~~e~v~avr~a~g~ 189 (371)
T 2ps2_A 172 EPVTDAKRITAALANQQP 189 (371)
T ss_dssp CHHHHHHHHHHHTTTCCT
T ss_pred CHHHHHHHHHHHHHhcCC
Confidence 455555555555555554
No 351
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=20.01 E-value=3.1e+02 Score=21.30 Aligned_cols=47 Identities=4% Similarity=-0.065 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhhcCCc--eeEeecCCCCCHHHHHHHHHHHHhhCCCCcc
Q psy969 35 GIIMCSAIKHFHKLSGKK--IGLKPAGGISTFEDSVRWIYLVLIMLGPDWL 83 (106)
Q Consensus 35 v~lm~~~i~~~~~~~~~~--vgiKaaGGIrt~~~a~~~i~l~~~~lGa~w~ 83 (106)
++...+.+++.++..++. +.|-+-++- |.++|+++++..++ ++..|+
T Consensus 204 ~~~d~~~v~avR~a~G~~~~l~vDan~~~-~~~~A~~~~~~l~~-~~i~~i 252 (421)
T 4hnl_A 204 METTLKMFAAIKEKYGNQFQMLHDVHERL-HPNQAIQFAKAAEP-YQLFFL 252 (421)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEECTTCS-CHHHHHHHHHHHGG-GCCSEE
T ss_pred HHHHHHHHHHHHHHhCCCceEeccccccC-CHHHHHHHHHHhhh-hhhccc
Confidence 444444455555556664 566676654 89999999987655 588887
Done!