Query psy9690
Match_columns 111
No_of_seqs 118 out of 230
Neff 4.5
Searched_HMMs 13730
Date Fri Aug 16 17:08:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9690.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9690hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2ou3a1 a.287.1.1 (A:1-160) Te 26.5 36 0.0026 21.5 3.9 35 2-40 19-53 (160)
2 d1j2na_ a.165.1.1 (A:) Myosin 22.5 30 0.0022 21.9 2.8 31 6-43 63-93 (99)
3 d3c1va1 a.39.1.2 (A:2-94) Calc 10.6 81 0.0059 18.4 2.4 47 12-58 8-65 (93)
4 d1uuza_ d.233.1.1 (A:) Inhibit 9.1 1.6E+02 0.011 19.1 3.6 31 37-80 6-36 (130)
5 d1lfma_ a.3.1.1 (A:) Mitochond 8.8 72 0.0052 17.8 1.6 14 29-42 83-96 (103)
6 d1exra_ a.39.1.5 (A:) Calmodul 8.8 1.1E+02 0.0083 17.8 2.6 20 31-57 2-21 (146)
7 d1f1fa_ a.3.1.1 (A:) Cytochrom 8.5 75 0.0055 17.3 1.6 13 30-42 66-78 (88)
8 d1cc5a_ a.3.1.1 (A:) Cytochrom 8.1 86 0.0063 17.3 1.7 14 29-42 65-78 (83)
9 d2zgwa2 d.104.1.2 (A:1-188) Bi 6.7 65 0.0047 21.4 0.7 11 100-110 42-52 (188)
10 d1t95a1 a.5.8.1 (A:87-161) Hyp 6.6 1.2E+02 0.0088 17.6 1.9 15 6-20 7-21 (75)
No 1
>d2ou3a1 a.287.1.1 (A:1-160) Tellurite resistance protein of COG3793 {Nostoc punctiforme pcc 73102 [TaxId: 63737]}
Probab=26.52 E-value=36 Score=21.54 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=27.8
Q ss_pred CCCCCCHHHHHHHHHHHhccCcccccccCCCCHHHHHHH
Q psy9690 2 FDQKSTGSERHEFLQTILHQDDEEEEENEVPDDETVNQL 40 (111)
Q Consensus 2 FDnkST~eER~a~L~~LLe~~~~~~~~~e~~dDeeLN~~ 40 (111)
|++..+.+++.++++.|+.-.. .++..+++|+..|
T Consensus 19 ~~~~~~~~~~~~~~~~L~~vA~----aDG~v~~~E~~~i 53 (160)
T d2ou3a1 19 FNQIPTNEDSSIYMKSVLTCAK----ADGVISPEEKDWA 53 (160)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHH----SSSCCCHHHHHHH
T ss_pred cccCCchHHHHHHHHHHHHHHH----hcCCCCHHHHHHH
Confidence 6788899999999999998654 4566777787765
No 2
>d1j2na_ a.165.1.1 (A:) Myosin phosphatase inhibitor 17kDa protein, CPI-17 {Pig (Sus scrofa) [TaxId: 9823]}
Probab=22.52 E-value=30 Score=21.94 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHHHhccCcccccccCCCCHHHHHHHhcC
Q psy9690 6 STGSERHEFLQTILHQDDEEEEENEVPDDETVNQLIAR 43 (111)
Q Consensus 6 ST~eER~a~L~~LLe~~~~~~~~~e~~dDeeLN~~lAR 43 (111)
+|.++|..+|+.||.... -|+.+=||++|.|
T Consensus 63 ~s~e~R~~~lq~lL~~c~-------kPtE~FI~eLL~k 93 (99)
T d1j2na_ 63 ESEEERSRKIQGLLKSCT-------NPTENFVQELLVK 93 (99)
T ss_dssp SCSHHHHHHHHHHHTSSS-------SCSHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHhcC-------CChHHHHHHHHHH
Confidence 577788888999998765 2344567777754
No 3
>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}
Probab=10.62 E-value=81 Score=18.39 Aligned_cols=47 Identities=17% Similarity=0.388 Sum_probs=27.4
Q ss_pred HHHHHHHhccCcccccccCCCCHHHHHHHhcC----------ChHHH-HHHHHHhHHH
Q psy9690 12 HEFLQTILHQDDEEEEENEVPDDETVNQLIAR----------TEDEL-TLFQKMDAER 58 (111)
Q Consensus 12 ~a~L~~LLe~~~~~~~~~e~~dDeeLN~~lAR----------seeE~-~lF~~mD~ER 58 (111)
-..|..+.+.-...+.....++-+||-++|.. +++++ .+|..+|..+
T Consensus 8 i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~ 65 (93)
T d3c1va1 8 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNR 65 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCC
Confidence 34445555542222233456888999998854 44544 4788888543
No 4
>d1uuza_ d.233.1.1 (A:) Inhibitor of vertebrate lysozyme, Ivy {Pseudomonas aeruginosa [TaxId: 287]}
Probab=9.07 E-value=1.6e+02 Score=19.14 Aligned_cols=31 Identities=13% Similarity=0.308 Sum_probs=22.2
Q ss_pred HHHHhcCChHHHHHHHHHhHHHhcCCCCCCCCCCCccchhhhcC
Q psy9690 37 VNQLIARTEDELTLFQKMDAERRKGETKPRLVEIKELPDWMVKD 80 (111)
Q Consensus 37 LN~~lARseeE~~lF~~mD~ER~~~e~~~RL~~~~ELP~~~~~d 80 (111)
+|++|. ...=...|++|= =.+.-||+|.+..
T Consensus 6 ~~eL~~-~~~yr~awq~mv------------kg~~~LP~WV~~g 36 (130)
T d1uuza_ 6 LFELLG-QPGYKATWHAMF------------KGESDVPKWVSDA 36 (130)
T ss_dssp HHHHTT-SHHHHHHHHHHT------------SSCCSCCHHHHTT
T ss_pred HHHHhh-ChHHHHHHHHHH------------hccccCcHHHHhC
Confidence 678886 677778888883 1334489998864
No 5
>d1lfma_ a.3.1.1 (A:) Mitochondrial cytochrome c {Bluefin tuna (Thunnus thynnus) [TaxId: 8237]}
Probab=8.84 E-value=72 Score=17.75 Aligned_cols=14 Identities=14% Similarity=0.254 Sum_probs=11.0
Q ss_pred cCCCCHHHHHHHhc
Q psy9690 29 NEVPDDETVNQLIA 42 (111)
Q Consensus 29 ~e~~dDeeLN~~lA 42 (111)
...+++++|..|||
T Consensus 83 ~~~ls~~ei~dviA 96 (103)
T d1lfma_ 83 AGIKKKGERQDLVA 96 (103)
T ss_dssp CCCCSHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH
Confidence 34568999999986
No 6
>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}
Probab=8.81 E-value=1.1e+02 Score=17.75 Aligned_cols=20 Identities=15% Similarity=0.317 Sum_probs=12.7
Q ss_pred CCCHHHHHHHhcCChHHHHHHHHHhHH
Q psy9690 31 VPDDETVNQLIARTEDELTLFQKMDAE 57 (111)
Q Consensus 31 ~~dDeeLN~~lARseeE~~lF~~mD~E 57 (111)
-++++++.++ ..+|..||..
T Consensus 2 ~lt~~e~~~l-------~~~F~~~D~~ 21 (146)
T d1exra_ 2 QLTEEQIAEF-------KEAFALFDKD 21 (146)
T ss_dssp CCCHHHHHHH-------HHHHHHHCTT
T ss_pred CCCHHHHHHH-------HHHHHHHcCC
Confidence 3566666655 5577777744
No 7
>d1f1fa_ a.3.1.1 (A:) Cytochrome c6 (synonym: cytochrome c553) {Arthrospira maxima [TaxId: 129910]}
Probab=8.51 E-value=75 Score=17.33 Aligned_cols=13 Identities=8% Similarity=0.008 Sum_probs=10.9
Q ss_pred CCCCHHHHHHHhc
Q psy9690 30 EVPDDETVNQLIA 42 (111)
Q Consensus 30 e~~dDeeLN~~lA 42 (111)
..++|+||..|+|
T Consensus 66 ~~Lsd~ei~~v~a 78 (88)
T d1f1fa_ 66 GRLSPLQIEDVAA 78 (88)
T ss_dssp TTSCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4689999999886
No 8
>d1cc5a_ a.3.1.1 (A:) Cytochrome c5 {Azotobacter vinelandii [TaxId: 354]}
Probab=8.06 E-value=86 Score=17.29 Aligned_cols=14 Identities=14% Similarity=0.138 Sum_probs=11.2
Q ss_pred cCCCCHHHHHHHhc
Q psy9690 29 NEVPDDETVNQLIA 42 (111)
Q Consensus 29 ~e~~dDeeLN~~lA 42 (111)
...++|+||..+++
T Consensus 65 ~~~Lsd~ei~~vv~ 78 (83)
T d1cc5a_ 65 CADCSDDELKAAIG 78 (83)
T ss_dssp CSSCCHHHHHHHHH
T ss_pred cCCCCHHHHHHHHH
Confidence 45689999998875
No 9
>d2zgwa2 d.104.1.2 (A:1-188) Biotin--[acetyl-CoA-carboxylase] ligase catalytic domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=6.67 E-value=65 Score=21.45 Aligned_cols=11 Identities=45% Similarity=0.730 Sum_probs=8.5
Q ss_pred hhccCcccccc
Q psy9690 100 ALMGRGSRQRK 110 (111)
Q Consensus 100 ~~~GRG~R~Rk 110 (111)
+--|||+|.|+
T Consensus 42 Qt~GrGR~gr~ 52 (188)
T d2zgwa2 42 QTMGHGALNRK 52 (188)
T ss_dssp BSSCBCGGGCB
T ss_pred cCCCCCCCCCC
Confidence 45699999875
No 10
>d1t95a1 a.5.8.1 (A:87-161) Hypothetical protein AF0491, middle domain {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=6.58 E-value=1.2e+02 Score=17.65 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=11.3
Q ss_pred CCHHHHHHHHHHHhc
Q psy9690 6 STGSERHEFLQTILH 20 (111)
Q Consensus 6 ST~eER~a~L~~LLe 20 (111)
-|++||+.+++++..
T Consensus 7 ls~~eR~~~~e~k~~ 21 (75)
T d1t95a1 7 ITAEQRREMLEAKRK 21 (75)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHH
Confidence 477888888887754
Done!