RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9690
         (111 letters)



>d1o98a1 c.105.1.1 (A:77-310) 2,3-Bisphosphoglycerate-independent
           phosphoglycerate mutase, substrate-binding domain
           {Bacillus stearothermophilus [TaxId: 1422]}
          Length = 234

 Score = 23.9 bits (51), Expect = 5.8
 Identities = 8/62 (12%), Positives = 17/62 (27%), Gaps = 2/62 (3%)

Query: 43  RTEDELTLFQKMDAERRKGET--KPRLVEIKELPDWMVKDDDEVENSMYEEEREREKEEA 100
              D L   +         E      +V     P   ++D+D +    +  +R  +    
Sbjct: 136 TYRDPLECIEDSYKHGIYDEFVLPSVIVREDGRPVATIQDNDAIIFYNFRPDRAIQISNT 195

Query: 101 LM 102
             
Sbjct: 196 FT 197


>d1czpa_ d.15.4.1 (A:) 2Fe-2S ferredoxin {Cyanobacterium (Anabaena
          sp.), pcc 7119 and 7120 [TaxId: 1167]}
          Length = 98

 Score = 23.0 bits (49), Expect = 6.8
 Identities = 8/21 (38%), Positives = 15/21 (71%)

Query: 17 TILHQDDEEEEENEVPDDETV 37
          T++++ +  + E EVPDDE +
Sbjct: 6  TLINEAEGTKHEIEVPDDEYI 26


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.307    0.127    0.341 

Gapped
Lambda     K      H
   0.267   0.0557    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 408,840
Number of extensions: 18142
Number of successful extensions: 51
Number of sequences better than 10.0: 1
Number of HSP's gapped: 51
Number of HSP's successfully gapped: 21
Length of query: 111
Length of database: 2,407,596
Length adjustment: 70
Effective length of query: 41
Effective length of database: 1,446,496
Effective search space: 59306336
Effective search space used: 59306336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 47 (22.3 bits)