Query psy9692
Match_columns 142
No_of_seqs 163 out of 227
Neff 5.6
Searched_HMMs 13730
Date Fri Aug 16 17:11:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9692.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9692hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i27a_ a.4.5.30 (A:) C-termin 78.6 0.33 2.4E-05 30.7 1.1 17 115-131 7-23 (73)
2 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 36.0 7.4 0.00054 23.7 1.5 12 29-40 3-14 (67)
3 d1od6a_ c.26.1.3 (A:) Phosphop 33.8 4.8 0.00035 25.8 0.4 26 108-133 132-160 (160)
4 d1qjca_ c.26.1.3 (A:) Phosphop 31.6 7.4 0.00054 24.7 1.1 25 108-132 130-157 (157)
5 d1u7ka_ a.73.1.1 (A:) AKV caps 18.2 17 0.0012 24.6 0.8 12 24-35 28-39 (131)
6 d1vlha_ c.26.1.3 (A:) Phosphop 17.5 23 0.0017 22.2 1.3 25 107-131 129-156 (157)
7 d1bgfa_ a.90.1.1 (A:) Transcri 17.2 1.2E+02 0.0091 19.7 5.3 32 10-41 79-113 (124)
8 d1eiga_ d.9.1.1 (A:) Eotaxin-2 16.6 38 0.0028 19.9 2.2 14 65-79 52-65 (73)
9 d1zkea1 a.30.6.1 (A:1-79) Hypo 16.0 1.1E+02 0.0079 18.6 4.2 31 4-34 3-34 (79)
10 d1esra_ d.9.1.1 (A:) Monocyte 15.6 53 0.0038 19.4 2.7 16 65-81 56-71 (76)
No 1
>d1i27a_ a.4.5.30 (A:) C-terminal domain of the rap74 subunit of TFIIF {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.63 E-value=0.33 Score=30.73 Aligned_cols=17 Identities=35% Similarity=0.339 Sum_probs=13.9
Q ss_pred CCCcHHHHHHHHHHHHH
Q psy9692 115 YQPWAEEAVCRYFYSKV 131 (142)
Q Consensus 115 ~qpwv~eav~ry~~~k~ 131 (142)
+-+-+||||.|||-+|.
T Consensus 7 ~~~itEeaVrRYL~RKP 23 (73)
T d1i27a_ 7 DVQVTEDAVRRYLTRKP 23 (73)
T ss_dssp CSSCCHHHHHHHHHHSC
T ss_pred CcCcCHHHHHHHHhhCC
Confidence 34668999999999874
No 2
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.96 E-value=7.4 Score=23.66 Aligned_cols=12 Identities=33% Similarity=0.778 Sum_probs=10.4
Q ss_pred CHHHHHHHHHHH
Q psy9692 29 DPQQFINKWIIS 40 (142)
Q Consensus 29 dP~~FI~~wi~S 40 (142)
||++|+..|=+.
T Consensus 3 ~pvgF~eaW~aq 14 (67)
T d1k1fa_ 3 DPVGFAEAWKAQ 14 (67)
T ss_dssp CHHHHHHHHHHH
T ss_pred ChhHHHHHHHHh
Confidence 899999999764
No 3
>d1od6a_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=33.81 E-value=4.8 Score=25.81 Aligned_cols=26 Identities=19% Similarity=0.074 Sum_probs=19.9
Q ss_pred hhhhhccCCCc---HHHHHHHHHHHHHHH
Q psy9692 108 ERRSDFYYQPW---AEEAVCRYFYSKVQQ 133 (142)
Q Consensus 108 eR~sefy~qpw---v~eav~ry~~~k~~q 133 (142)
=|..-...++| |.++|..|+..|..|
T Consensus 132 IR~~i~~g~~i~~lVP~~V~~yIkek~~~ 160 (160)
T d1od6a_ 132 VKEIARYGGDVSKLVPPATLRALKAKLGQ 160 (160)
T ss_dssp HHHHHHTTCCCTTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHcCCChHHhcCHHHHHHHHHHhcc
Confidence 35555667788 999999999888653
No 4
>d1qjca_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Escherichia coli [TaxId: 562]}
Probab=31.60 E-value=7.4 Score=24.67 Aligned_cols=25 Identities=12% Similarity=-0.008 Sum_probs=18.9
Q ss_pred hhhhhccCCCc---HHHHHHHHHHHHHH
Q psy9692 108 ERRSDFYYQPW---AEEAVCRYFYSKVQ 132 (142)
Q Consensus 108 eR~sefy~qpw---v~eav~ry~~~k~~ 132 (142)
=|..--...+| |+++|..|+..|++
T Consensus 130 IR~~i~~g~di~~lvP~~V~~yI~~k~~ 157 (157)
T d1qjca_ 130 VKEVARHQGDVTHFLPENVHQALMAKLA 157 (157)
T ss_dssp HHHHHHTTCCCGGGSCHHHHHHHHHHHC
T ss_pred HHHHHHcCCChHHhCCHHHHHHHHHhhC
Confidence 35545556777 99999999998874
No 5
>d1u7ka_ a.73.1.1 (A:) AKV capsid {AKV murine leukemia virus [TaxId: 11791]}
Probab=18.18 E-value=17 Score=24.62 Aligned_cols=12 Identities=33% Similarity=0.642 Sum_probs=10.4
Q ss_pred HHHhhCHHHHHH
Q psy9692 24 LSFAKDPQQFIN 35 (142)
Q Consensus 24 l~fs~dP~~FI~ 35 (142)
-+||+||++||.
T Consensus 28 p~fse~P~~~i~ 39 (131)
T d1u7ka_ 28 PSFSEDPGKLTA 39 (131)
T ss_dssp CCTTTCHHHHHH
T ss_pred CchhhCHHHHHH
Confidence 479999999985
No 6
>d1vlha_ c.26.1.3 (A:) Phosphopantetheine adenylyltransferase {Thermotoga maritima [TaxId: 2336]}
Probab=17.47 E-value=23 Score=22.21 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=18.6
Q ss_pred hhhhhhccCCCc---HHHHHHHHHHHHH
Q psy9692 107 EERRSDFYYQPW---AEEAVCRYFYSKV 131 (142)
Q Consensus 107 ~eR~sefy~qpw---v~eav~ry~~~k~ 131 (142)
.=|..-.-.++| |.++|..||..|+
T Consensus 129 ~IR~~i~~g~~i~~lvP~~V~~yI~ek~ 156 (157)
T d1vlha_ 129 LVKEVALYGGDVTEWVPPEVARALNEKL 156 (157)
T ss_dssp HHHHHHHTTCCCTTTSCHHHHHHHHHHT
T ss_pred HHHHHHHcCCChhHhcCHHHHHHHHHHh
Confidence 335555566676 9999999998775
No 7
>d1bgfa_ a.90.1.1 (A:) Transcription factor STAT-4 N-domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=17.23 E-value=1.2e+02 Score=19.67 Aligned_cols=32 Identities=13% Similarity=0.172 Sum_probs=22.7
Q ss_pred HHHHHhhhHHHHHHHHHhhCHHHH---HHHHHHHH
Q psy9692 10 VETINSLKTNREFFLSFAKDPQQF---INKWIISQ 41 (142)
Q Consensus 10 i~~i~~~k~rr~F~l~fs~dP~~F---I~~wi~SQ 41 (142)
+..++--+.+++|=..|+.||..+ |..+|..-
T Consensus 79 l~~~~l~~~~~~~q~~y~~nP~~L~~iI~~cL~~E 113 (124)
T d1bgfa_ 79 LLIHNLKRIRKVLQGKFHGNPMHVAVVISNCLREE 113 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHH
Confidence 344555567788888999999776 66666543
No 8
>d1eiga_ d.9.1.1 (A:) Eotaxin-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=16.56 E-value=38 Score=19.92 Aligned_cols=14 Identities=14% Similarity=0.418 Sum_probs=10.2
Q ss_pred CChhHHHHHHHHHHH
Q psy9692 65 YQPWAEEAVCRYFYS 79 (142)
Q Consensus 65 ~~pwv~EAV~ryl~~ 79 (142)
.++||++.| ++|..
T Consensus 52 ~~~WVk~~i-~~L~~ 65 (73)
T d1eiga_ 52 KQEWVQRYM-KNLDA 65 (73)
T ss_dssp TSHHHHHHH-HHHHH
T ss_pred ChHHHHHHH-HHHHH
Confidence 569999988 55543
No 9
>d1zkea1 a.30.6.1 (A:1-79) Hypothetical protein HP1531 {Helicobacter pylori [TaxId: 210]}
Probab=16.00 E-value=1.1e+02 Score=18.62 Aligned_cols=31 Identities=26% Similarity=0.417 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHhhCH-HHHH
Q psy9692 4 NKIHETVETINSLKTNREFFLSFAKDP-QQFI 34 (142)
Q Consensus 4 ~~I~~~i~~i~~~k~rr~F~l~fs~dP-~~FI 34 (142)
++|..++..|.++..--.+++.+|+-. ++||
T Consensus 3 EkId~Il~~IE~~q~eI~~lL~~AkiS~vDyI 34 (79)
T d1zkea1 3 EKIRKILADIEDSQNEIEMLLKLANLSLGDFI 34 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHhh
Confidence 689999999999999999999999855 5555
No 10
>d1esra_ d.9.1.1 (A:) Monocyte chemoattractant protein-2 (MCP-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.60 E-value=53 Score=19.38 Aligned_cols=16 Identities=6% Similarity=0.349 Sum_probs=11.1
Q ss_pred CChhHHHHHHHHHHHHH
Q psy9692 65 YQPWAEEAVCRYFYSKV 81 (142)
Q Consensus 65 ~~pwv~EAV~ryl~~kv 81 (142)
..+||++.| .+|..+.
T Consensus 56 ~~~WVq~~i-~~l~~~~ 71 (76)
T d1esra_ 56 KERWVRDSM-KHLDQIF 71 (76)
T ss_dssp TSHHHHHHH-HHHHHHH
T ss_pred ChHHHHHHH-HHHHHhh
Confidence 468999988 5554444
Done!