RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9695
(159 letters)
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 44.3 bits (105), Expect = 6e-08
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 49
C K+F+ L+ HM+ H+ + + C
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 44.3 bits (105), Expect = 6e-08
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTGDKPFRC 108
C K+F+ L+ HM+ H+ + + C
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 44.2 bits (105), Expect = 7e-08
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 19 HLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTI 51
++C C K FS L H++ HT ++P +C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 44.2 bits (105), Expect = 7e-08
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 78 HLCHVCHKNFSSSSALQIHMR-THTGDKPFRCTI 110
++C C K FS L H++ HT ++P +C +
Sbjct: 6 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 31.1 bits (71), Expect = 0.006
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 101 TGDKPFRCTICQKAFTTKGNLKVREIEINIG 131
+ KP+ C C K F+ +L +++
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTS 31
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 41.5 bits (98), Expect = 8e-07
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 98 RTHTGDKPFRCTICQKAFTTKGNLKV 123
RTH+G+KP+ C IC FT G +K+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKM 26
Score = 41.1 bits (97), Expect = 9e-07
Identities = 13/25 (52%), Positives = 17/25 (68%)
Query: 39 RTHTGDKPFRCTICQKAFTTKGNLK 63
RTH+G+KP+ C IC FT G +K
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMK 25
Score = 30.7 bits (70), Expect = 0.008
Identities = 8/25 (32%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Query: 21 CHVCHKNFSSSSALQIH-MRTHTGD 44
C++CH F+ S +++H ++ HT +
Sbjct: 11 CYICHARFTQSGTMKMHILQKHTEN 35
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 40.8 bits (95), Expect = 2e-06
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Query: 44 DKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTH 100
DK + C C K+FT K + G+ + C VC K F L HM+ H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRD---RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 38.5 bits (89), Expect = 2e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 83 CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLKV 123
C K+F+ S HM H G +P+ C +C K F K +L
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVG 48
Score = 38.1 bits (88), Expect = 2e-05
Identities = 15/40 (37%), Positives = 21/40 (52%)
Query: 24 CHKNFSSSSALQIHMRTHTGDKPFRCTICQKAFTTKGNLK 63
C K+F+ S HM H G +P+ C +C K F K +L
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLV 47
Score = 30.8 bits (69), Expect = 0.010
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 16 MPKHLCHVCHKNFSSSSALQIHMRTH 41
+ + C VC K F L HM+ H
Sbjct: 28 LRPYGCGVCGKKFKMKHHLVGHMKIH 53
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 40.1 bits (94), Expect = 3e-06
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 96 HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
R TG KPF+C C ++F+ +L +
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLAL 29
Score = 39.7 bits (93), Expect = 3e-06
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 37 HMRTHTGDKPFRCTICQKAFTTKGNLK 63
R TG KPF+C C ++F+ +L
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLA 28
Score = 29.7 bits (67), Expect = 0.017
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTG 43
C C ++FS S L +H + H
Sbjct: 14 CPDCDRSFSRSDHLALHRKRHML 36
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 39.1 bits (92), Expect = 4e-06
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGDK 45
C VC + F+ L+ H R+HT +K
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 39.1 bits (92), Expect = 4e-06
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTGDK 104
C VC + F+ L+ H R+HT +K
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 28.7 bits (65), Expect = 0.034
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 104 KPFRCTICQKAFTTKGNLKV 123
+ F C +C +AF + +LK
Sbjct: 1 RSFVCEVCTRAFARQEHLKR 20
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 39.3 bits (92), Expect = 5e-06
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 98 RTHTGDKPFRCTICQKAFTTKGNLKV 123
RTHTG+KP+ C+ C K F K L +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDM 26
Score = 38.9 bits (91), Expect = 6e-06
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 39 RTHTGDKPFRCTICQKAFTTKGNLK 63
RTHTG+KP+ C+ C K F K L
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLD 25
Score = 33.5 bits (77), Expect = 7e-04
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGDK 45
C C K F L +H + +
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHDPN 35
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 38.1 bits (89), Expect = 1e-05
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGDK 45
C C K F S L H++TH K
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 38.1 bits (89), Expect = 1e-05
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTGDK 104
C C K F S L H++TH K
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 26.5 bits (59), Expect = 0.19
Identities = 7/20 (35%), Positives = 8/20 (40%)
Query: 104 KPFRCTICQKAFTTKGNLKV 123
K F C C K F +L
Sbjct: 1 KKFACPECPKRFMRSDHLSK 20
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 37.2 bits (87), Expect = 2e-05
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTG 43
C +C +NFS S L H+RTHTG
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTG 28
Score = 37.2 bits (87), Expect = 2e-05
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTG 102
C +C +NFS S L H+RTHTG
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTG 28
Score = 28.3 bits (64), Expect = 0.046
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 104 KPFRCTICQKAFTTKGNLKV 123
KPF+C IC + F+ +L
Sbjct: 2 KPFQCRICMRNFSRSDHLTT 21
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 37.2 bits (87), Expect = 3e-05
Identities = 15/62 (24%), Positives = 19/62 (30%), Gaps = 31/62 (50%)
Query: 41 HTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTH 100
H+G+KP+ C C KAF+ L H R H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILV-------------------------------QHQRVH 30
Query: 101 TG 102
TG
Sbjct: 31 TG 32
Score = 36.8 bits (86), Expect = 3e-05
Identities = 13/25 (52%), Positives = 14/25 (56%)
Query: 19 HLCHVCHKNFSSSSALQIHMRTHTG 43
+ C C K FS SS L H R HTG
Sbjct: 8 YGCVECGKAFSRSSILVQHQRVHTG 32
Score = 36.4 bits (85), Expect = 5e-05
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 100 HTGDKPFRCTICQKAFTTKGNLKV 123
H+G+KP+ C C KAF+ L
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQ 25
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 36.7 bits (85), Expect = 5e-05
Identities = 5/28 (17%), Positives = 11/28 (39%)
Query: 96 HMRTHTGDKPFRCTICQKAFTTKGNLKV 123
+ ++C C K+F+ +L
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSK 30
Score = 36.3 bits (84), Expect = 6e-05
Identities = 11/66 (16%), Positives = 17/66 (25%), Gaps = 31/66 (46%)
Query: 37 HMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIH 96
+ ++C C K+F+ +L H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLS-------------------------------KH 31
Query: 97 MRTHTG 102
RTHTG
Sbjct: 32 RRTHTG 37
Score = 31.3 bits (71), Expect = 0.005
Identities = 14/23 (60%), Positives = 15/23 (65%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTG 43
C C K+FS SS L H RTHTG
Sbjct: 15 CDECGKSFSHSSDLSKHRRTHTG 37
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 35.8 bits (83), Expect = 9e-05
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 24 CHKNFSSSSALQIHMRTHTGDK 45
C K F+ S LQ H RTHTG+K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 35.8 bits (83), Expect = 9e-05
Identities = 13/22 (59%), Positives = 15/22 (68%)
Query: 83 CHKNFSSSSALQIHMRTHTGDK 104
C K F+ S LQ H RTHTG+K
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 24.6 bits (54), Expect = 1.1
Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Query: 104 KPFRCTI--CQKAFTTKGNLKV 123
+PF CT C K FT L+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQR 22
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 35.3 bits (81), Expect = 2e-04
Identities = 11/73 (15%), Positives = 21/73 (28%), Gaps = 30/73 (41%)
Query: 32 SALQIHMRTHTGDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSS 91
++ +++ DK F C C K F
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPG-----------------------------CTKTFKRRY 34
Query: 92 ALQIHMRTHTGDK 104
++ H++TH D+
Sbjct: 35 NIRSHIQTHLEDR 47
Score = 33.4 bits (76), Expect = 9e-04
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDK 45
+ L C K F ++ H++TH D+
Sbjct: 20 ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.0 bits (57), Expect = 0.43
Identities = 7/35 (20%), Positives = 15/35 (42%), Gaps = 3/35 (8%)
Query: 91 SALQIHMRTHTGDKPFRCTICQ--KAFTTKGNLKV 123
++ +++ DK F C K F + N++
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRS 38
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 30
Score = 33.8 bits (78), Expect = 4e-04
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 24 CHKNFSSSSALQIHMRTHTGD 44
C K++S L+ H+R+HTG+
Sbjct: 10 CRKSYSRLENLKTHLRSHTGE 30
Score = 33.8 bits (78), Expect = 4e-04
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 83 CHKNFSSSSALQIHMRTHTGD 103
C K++S L+ H+R+HTG+
Sbjct: 10 CRKSYSRLENLKTHLRSHTGE 30
Score = 24.6 bits (54), Expect = 1.1
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Query: 104 KPFRCTI--CQKAFTTKGNLKV 123
KP +CT C+K+++ NLK
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKT 22
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 32.7 bits (75), Expect = 0.001
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 24 CHKNFSSSSALQIHMRTHTG 43
C + FS S+ L H+R HTG
Sbjct: 10 CDRRFSRSADLTRHIRIHTG 29
Score = 32.7 bits (75), Expect = 0.001
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 83 CHKNFSSSSALQIHMRTHTG 102
C + FS S+ L H+R HTG
Sbjct: 10 CDRRFSRSADLTRHIRIHTG 29
Score = 23.0 bits (50), Expect = 3.7
Identities = 5/22 (22%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Query: 104 KPFRCTI--CQKAFTTKGNLKV 123
+P+ C + C + F+ +L
Sbjct: 1 RPYACPVESCDRRFSRSADLTR 22
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 33.1 bits (76), Expect = 0.001
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDK 45
+ C C + F S+ AL HM H D+
Sbjct: 5 SYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 33.1 bits (76), Expect = 0.001
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 77 KHLCHVCHKNFSSSSALQIHMRTHTGDK 104
+ C C + F S+ AL HM H D+
Sbjct: 5 SYTCSFCKREFRSAQALGGHMNVHRRDR 32
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 32.0 bits (73), Expect = 0.002
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 100 HTGDKPFRCTICQKAFTTKGNLKV 123
+G +PF C IC AFTTK N
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCAR 25
Score = 32.0 bits (73), Expect = 0.002
Identities = 12/23 (52%), Positives = 14/23 (60%)
Query: 41 HTGDKPFRCTICQKAFTTKGNLK 63
+G +PF C IC AFTTK N
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCA 24
Score = 30.9 bits (70), Expect = 0.006
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 19 HLCHVCHKNFSSSSALQIHMRTHTG 43
+C +C F++ + H++ HT
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTD 32
Score = 30.9 bits (70), Expect = 0.006
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 78 HLCHVCHKNFSSSSALQIHMRTHTG 102
+C +C F++ + H++ HT
Sbjct: 8 FVCRICLSAFTTKANCARHLKVHTD 32
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 31.8 bits (73), Expect = 0.003
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 21 CHVCHKNFSSSSALQIHMRTHT 42
C C K FS +S L H R HT
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
Score = 31.8 bits (73), Expect = 0.003
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 80 CHVCHKNFSSSSALQIHMRTHT 101
C C K FS +S L H R HT
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
Score = 24.9 bits (55), Expect = 0.75
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 104 KPFRCTICQKAFTTKGNLKV 123
KP++C C KAF+ L
Sbjct: 1 KPYKCLECGKAFSQNSGLIN 20
Score = 24.9 bits (55), Expect = 0.81
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 45 KPFRCTICQKAFTTKGNL 62
KP++C C KAF+ L
Sbjct: 1 KPYKCLECGKAFSQNSGL 18
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 30.8 bits (70), Expect = 0.005
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 24 CHKNFSSSSALQIHMRTHTGD 44
C K FS L+ H+R HTGD
Sbjct: 10 CGKRFSLDFNLRTHVRIHTGD 30
Score = 30.8 bits (70), Expect = 0.005
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 83 CHKNFSSSSALQIHMRTHTGD 103
C K FS L+ H+R HTGD
Sbjct: 10 CGKRFSLDFNLRTHVRIHTGD 30
Score = 24.6 bits (54), Expect = 0.87
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Query: 104 KPFRCTI--CQKAFTTKGNLKV 123
KPF+CT C K F+ NL+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRT 22
Score = 24.6 bits (54), Expect = 1.1
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Query: 45 KPFRCTI--CQKAFTTKGNLK 63
KPF+CT C K F+ NL+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLR 21
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 30.8 bits (70), Expect = 0.006
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 24 CHKNFSSSSALQIHMRTHTG 43
C K F + L H ++H
Sbjct: 11 CDKAFVRNHDLIRHKKSHQE 30
Score = 30.8 bits (70), Expect = 0.006
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 83 CHKNFSSSSALQIHMRTHTG 102
C K F + L H ++H
Sbjct: 11 CDKAFVRNHDLIRHKKSHQE 30
Score = 25.0 bits (55), Expect = 0.83
Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 2/23 (8%)
Query: 103 DKPFRCTI--CQKAFTTKGNLKV 123
D+P+ C C KAF +L
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIR 23
Score = 25.0 bits (55), Expect = 0.88
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
Query: 44 DKPFRCTI--CQKAFTTKGNLK 63
D+P+ C C KAF +L
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLI 22
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 31.2 bits (71), Expect = 0.007
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 15 GMPKHLCHVCHKNFSSSSALQIHMRT 40
G H C C + F S+ L+ H R+
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRS 37
Score = 31.2 bits (71), Expect = 0.007
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 74 GMPKHLCHVCHKNFSSSSALQIHMRT 99
G H C C + F S+ L+ H R+
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFRS 37
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 30.4 bits (69), Expect = 0.008
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 24 CHKNFSSSSALQIHMRTHT 42
C+K F+ S+ L+ H+ TH
Sbjct: 10 CNKKFAQSTNLKSHILTHA 28
Score = 30.4 bits (69), Expect = 0.008
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 83 CHKNFSSSSALQIHMRTHT 101
C+K F+ S+ L+ H+ TH
Sbjct: 10 CNKKFAQSTNLKSHILTHA 28
Score = 23.8 bits (52), Expect = 2.0
Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 2/22 (9%)
Query: 104 KPFRCTI--CQKAFTTKGNLKV 123
+P+ C C K F NLK
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKS 22
Score = 23.5 bits (51), Expect = 2.3
Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
Query: 45 KPFRCTI--CQKAFTTKGNLK 63
+P+ C C K F NLK
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLK 21
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 28.9 bits (64), Expect = 0.028
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGDK 45
C CHK F S L++H R HTG+K
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 28.9 bits (64), Expect = 0.028
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTGDK 104
C CHK F S L++H R HTG+K
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 28.5 bits (63), Expect = 0.040
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 19 HLCHVCHKNFSSSSALQIHMRTHTG 43
H C VC K FS L+ HMR HTG
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 28.5 bits (63), Expect = 0.040
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 78 HLCHVCHKNFSSSSALQIHMRTHTG 102
H C VC K FS L+ HMR HTG
Sbjct: 2 HKCEVCGKCFSRKDKLKTHMRCHTG 26
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 27.7 bits (61), Expect = 0.074
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGD 44
C +C +SS L +H+R+HTGD
Sbjct: 6 CQICPYASRNSSQLTVHLRSHTGD 29
Score = 27.7 bits (61), Expect = 0.074
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTGD 103
C +C +SS L +H+R+HTGD
Sbjct: 6 CQICPYASRNSSQLTVHLRSHTGD 29
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 26.6 bits (59), Expect = 0.18
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 26 KNFSSSSALQIHMRTHTGD 44
+ F + L +HMR HTG+
Sbjct: 15 RPFKAQYMLVVHMRRHTGE 33
Score = 26.6 bits (59), Expect = 0.18
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 85 KNFSSSSALQIHMRTHTGD 103
+ F + L +HMR HTG+
Sbjct: 15 RPFKAQYMLVVHMRRHTGE 33
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 26.4 bits (58), Expect = 0.23
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDK 45
K++C C S L+ H+RTHT +
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 26.4 bits (58), Expect = 0.23
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 77 KHLCHVCHKNFSSSSALQIHMRTHTGDK 104
K++C C S L+ H+RTHT +
Sbjct: 1 KYICEECGIRAKKPSMLKKHIRTHTDVR 28
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 26.2 bits (57), Expect = 0.28
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 18 KHLCHVCHKNFSSSSALQIHMRTHTGDKPF 47
+ C +C K F L H +H+G+KP+
Sbjct: 5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.2 bits (57), Expect = 0.28
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 77 KHLCHVCHKNFSSSSALQIHMRTHTGDKPF 106
+ C +C K F L H +H+G+KP+
Sbjct: 5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger
domain) {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 25.7 bits (56), Expect = 0.35
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 19 HLCHVCHKNFSSSSALQIHMRTHTGD 44
H+C C K F SS L+ H HTG+
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 25.7 bits (56), Expect = 0.35
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 78 HLCHVCHKNFSSSSALQIHMRTHTGD 103
H+C C K F SS L+ H HTG+
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTGE 28
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 25.9 bits (56), Expect = 0.40
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTGD 44
C VC + F L++HM +HTG+
Sbjct: 7 CSVCQETFRRRMELRLHMVSHTGE 30
Score = 25.9 bits (56), Expect = 0.40
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTGD 103
C VC + F L++HM +HTG+
Sbjct: 7 CSVCQETFRRRMELRLHMVSHTGE 30
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 24.2 bits (52), Expect = 1.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 21 CHVCHKNFSSSSALQIHMRTHTG 43
C VC F + H+R+H G
Sbjct: 6 CPVCGLRFKRKDRMSYHVRSHDG 28
Score = 24.2 bits (52), Expect = 1.4
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 80 CHVCHKNFSSSSALQIHMRTHTG 102
C VC F + H+R+H G
Sbjct: 6 CPVCGLRFKRKDRMSYHVRSHDG 28
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 25.5 bits (55), Expect = 2.4
Identities = 14/72 (19%), Positives = 23/72 (31%), Gaps = 18/72 (25%)
Query: 43 GDKPFRCTICQKAFTTKGNLKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTG 102
GD RC +C + G+ +C C KN + ++ +
Sbjct: 45 GDGVNRCILCGEQLGMLGS--------------ASVVCEDCKKNVCTKCGVETS---NNR 87
Query: 103 DKPFR-CTICQK 113
P C IC +
Sbjct: 88 PHPVWLCKICLE 99
Score = 23.5 bits (50), Expect = 8.7
Identities = 9/45 (20%), Positives = 16/45 (35%), Gaps = 4/45 (8%)
Query: 11 FNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFR-CTICQK 54
+ G +C C KN + ++ + P C IC +
Sbjct: 58 LGMLGSASVVCEDCKKNVCTKCGVETS---NNRPHPVWLCKICLE 99
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens)
[TaxId: 9606]}
Length = 137
Score = 24.8 bits (54), Expect = 4.0
Identities = 8/50 (16%), Positives = 18/50 (36%)
Query: 3 GKLIPNAVFNVAGMPKHLCHVCHKNFSSSSALQIHMRTHTGDKPFRCTIC 52
G ++P + + G K + +F + + H + R +C
Sbjct: 11 GGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVC 60
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 22.8 bits (48), Expect = 5.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 42 TGDKPFRCTICQKAF 56
TG KP+ C IC K F
Sbjct: 1 TGIKPYECNICAKRF 15
Score = 22.8 bits (48), Expect = 5.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 101 TGDKPFRCTICQKAF 115
TG KP+ C IC K F
Sbjct: 1 TGIKPYECNICAKRF 15
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 22.4 bits (47), Expect = 6.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 21 CHVCHKNFSSSSALQIHMRTH 41
C +C ++F SAL H R H
Sbjct: 3 CGLCERSFVEKSALSRHQRVH 23
Score = 22.4 bits (47), Expect = 6.5
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 80 CHVCHKNFSSSSALQIHMRTH 100
C +C ++F SAL H R H
Sbjct: 3 CGLCERSFVEKSALSRHQRVH 23
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 22.2 bits (47), Expect = 7.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 46 PFRCTICQKAFTTKGNL 62
P+ CT C +F TKGNL
Sbjct: 1 PYHCTYCNFSFKTKGNL 17
Score = 22.2 bits (47), Expect = 7.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 105 PFRCTICQKAFTTKGNL 121
P+ CT C +F TKGNL
Sbjct: 1 PYHCTYCNFSFKTKGNL 17
>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 37
Score = 22.3 bits (47), Expect = 7.7
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 40 THTGDKPFRCTICQKAFTTKGNL 62
T G+ +RC +C + +T N
Sbjct: 2 TKEGEHTYRCKVCSRVYTHISNF 24
Score = 22.3 bits (47), Expect = 7.7
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 99 THTGDKPFRCTICQKAFTTKGNL 121
T G+ +RC +C + +T N
Sbjct: 2 TKEGEHTYRCKVCSRVYTHISNF 24
>d1zu1a2 g.37.1.4 (A:74-128) dsRNA-binding protein ZFa (ZNF346,
JAZ) {African clawed frog (Xenopus laevis) [TaxId:
8355]}
Length = 55
Score = 22.6 bits (48), Expect = 9.9
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 17 PKHLCHVCHKNFSSSSALQIH 37
C VC+ FSS + H
Sbjct: 20 RSKCCPVCNMTFSSPVVAESH 40
Score = 22.6 bits (48), Expect = 9.9
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 76 PKHLCHVCHKNFSSSSALQIH 96
C VC+ FSS + H
Sbjct: 20 RSKCCPVCNMTFSSPVVAESH 40
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.133 0.419
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 564,740
Number of extensions: 24307
Number of successful extensions: 359
Number of sequences better than 10.0: 1
Number of HSP's gapped: 341
Number of HSP's successfully gapped: 181
Length of query: 159
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 81
Effective length of database: 1,336,656
Effective search space: 108269136
Effective search space used: 108269136
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (22.9 bits)