RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy9697
(128 letters)
>d2qaln1 g.39.1.7 (N:1-100) Ribosomal protein S14 {Escherichia coli
[TaxId: 562]}
Length = 100
Score = 62.9 bits (153), Expect = 1e-14
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 67 EVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRA 126
+ A PRDS P R + RC T RP G + ++ LSRI R A ++ G+++A
Sbjct: 39 DRWNAVLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKA 98
Query: 127 MW 128
W
Sbjct: 99 SW 100
>d2uubn1 g.39.1.7 (N:2-61) Ribosomal protein S14 {Thermus
thermophilus [TaxId: 274]}
Length = 60
Score = 58.5 bits (142), Expect = 2e-13
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 70 AAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLSGVQRAMW 128
A E A P+ R RCV R R V + L RI R LA +L GV++A W
Sbjct: 4 ALIEKAKRTPKF--KVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 60
>d1qada_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Cow (Bos taurus) [TaxId: 9913]}
Length = 107
Score = 47.3 bits (112), Expect = 1e-08
Identities = 15/62 (24%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIG 59
W S NR +A ++ +G FLVR SS ++ G + I K
Sbjct: 9 KTWNVGSSNRNKAENLLRGKRDGTFLVRESSKQGCYACSVVVDGEVKHCVINKTATGYGF 68
Query: 60 LG 61
Sbjct: 69 AE 70
>d2eyva1 d.93.1.1 (A:12-120) Crk proto-oncogen {Human (Homo
sapiens) [TaxId: 9606]}
Length = 109
Score = 45.9 bits (108), Expect = 4e-08
Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDNKIGL 60
W+ ++R+ AV ++ G FLVR SS+S L++ R + I
Sbjct: 2 WYWGRLSRQEAVALLQGQRHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSGPRPPVP 61
Query: 61 GTFKP 65
+
Sbjct: 62 PSPAQ 66
>d2cs0a1 d.93.1.1 (A:8-113) Hematopoietic SH2 domain containing
protein HSH2D {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 44.7 bits (105), Expect = 1e-07
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKIGLG 61
WFH +++RE A ++ + G FL+R S S TL+ + ++ DD +
Sbjct: 11 WFHGAISREDAENLLESQPLGSFLIRVSHSHVGYTLSYKAQSSCCHFMVKLLDDGTFMIP 70
Query: 62 TFKP--NEVMAAREDATNHPRDSHPCR-TQP 89
K + A P + TQP
Sbjct: 71 GEKVAHTSLDALVTFHQQKPIEPRRELLTQP 101
>d1fu6a_ d.93.1.1 (A:) Phosphatidylinositol 3-kinase, p85-alpha
subunit {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 111
Score = 44.2 bits (104), Expect = 2e-07
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDN 56
W+ ++RE + + +G FLVR +S+ TLTL GG +I I RD
Sbjct: 13 WYWGDISREEVNEKLRDTADGTFLVRDASTKMHGDYTLTLRKGGNNKSIKIFHRDGK 69
>d1bg1a3 d.93.1.1 (A:576-716) STAT3b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 141
Score = 44.5 bits (105), Expect = 2e-07
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP--LTLTLWYGGRAYNIFIRKRDDNKIG 59
+ +++ER +++ G FL+R S SS+ +T T + + I+ +
Sbjct: 9 YIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGSTQIQSVEPYTKQ 68
Query: 60 LGTFKP 65
Sbjct: 69 QLNNMS 74
>d2izva2 d.93.1.1 (A:274-385) Suppressor of cytokine signaling 4,
SOCS-4 {Human (Homo sapiens) [TaxId: 9606]}
Length = 112
Score = 43.9 bits (103), Expect = 3e-07
Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 4/99 (4%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
+ +++ A ++ EG FL+R S+ + +++ R+ + I + ++
Sbjct: 13 CYWGVMDKYAAEALLEGKPEGTFLLRDSAQEDYLFSVSFRRYSRSLHARIE-QWNHNFSF 71
Query: 61 GTFKPNEVMAAR-EDATNHPRDSHPCRTQPRCVITSRPR 98
P + H +D C + T R
Sbjct: 72 DAHDPCVFHSPDITGLLEHYKDPSACMFFEPLLSTPLIR 110
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10,
GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 43.4 bits (102), Expect = 3e-07
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 1 MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
WFH ++RE + +++ G +G FL+R S S+ LTL + + N I +D+
Sbjct: 5 QHWFHGRISREESHRIIKQQGLVDGLFLLRDSQSNPKAFVLTLCHHQKIKNFQILPCEDD 64
Query: 57 KIGLGTFKPNE 67
+
Sbjct: 65 GQTFFSLDDGN 75
>d1r1qa_ d.93.1.1 (A:) GRB2-related adaptor protein 2 (MONA, GRID)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 97
Score = 43.3 bits (102), Expect = 3e-07
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
WFH ++R +A ++ G F++R S SS ++++ + + + + L
Sbjct: 8 WFHEGLSRHQAENLLMGKDIGFFIIRASQSSPGDFSISVRHEDDVQHFKVMRDTKGNYFL 67
Query: 61 GT 62
T
Sbjct: 68 WT 69
>d1jwoa_ d.93.1.1 (A:) Csk homologous kinase Chk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 42.7 bits (100), Expect = 5e-07
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDN 56
M WFH ++ + AVQ + +G FLVR S+ L + +G + + RD +
Sbjct: 4 MPWFHGKISGQEAVQQLQPPEDGLFLVRESARHPGDYVLCVSFGRDVIHYRVLHRDGH 61
>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70
{Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 43.1 bits (101), Expect = 6e-07
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Query: 1 MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
M W+H S+ RE A + + +G +G FL+RP L+L YG Y+ I + K
Sbjct: 29 MPWYHSSLTREEAERKLYSGAQTDGKFLLRPRKEQGTYALSLIYGKTVYHYLISQDKAGK 88
Query: 58 IGLG 61
+
Sbjct: 89 YCIP 92
>d2c9wa2 d.93.1.1 (A:32-134) Suppressor of cytokine signaling 2,
SOCS-2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 42.7 bits (100), Expect = 6e-07
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
W+ S+ A + + EG FL+R SS S+ LT+++ N+ I +D
Sbjct: 15 TGWYWGSMTVNEAKEKLKEAPEGTFLIRDSSHSDYLLTISVKTSAGPTNLRIEYQDGK 72
>d2shpa2 d.93.1.1 (A:2-110) Tyrosine phoshatase shp-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 109
Score = 42.3 bits (99), Expect = 9e-07
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 3 WFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
WFH ++ A ++ G G FL RPS S+ LTL++ G +I I+ D
Sbjct: 5 WFHPNITGVEAENLLLTRGVDGSFLARPSKSNPGDLTLSVRRNGAVTHIKIQNTGDY 61
>d1rpya_ d.93.1.1 (A:) Adaptor protein Aps {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 86
Score = 40.7 bits (95), Expect = 2e-06
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 3 WFH-SVNRERAVQMVAAGG---EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
WFH +++R +A Q+V AGG G F++R S + LT + G+A ++ + +
Sbjct: 7 WFHGTLSRVKAAQLVLAGGPRSHGLFVIRQSETRPGECVLTFNFQGKAKHLRLSLNGHGQ 66
>d1xa6a2 d.93.1.1 (A:21-161) Beta-chimaerin, N-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 41.5 bits (97), Expect = 3e-06
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKIGL 60
FH ++RE+A +++ G EG +++R S TL L +G + N + + +G
Sbjct: 37 EFHGIISREQADELLG-GVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGE 95
Query: 61 GTFK 64
F+
Sbjct: 96 KRFE 99
>d1k9aa2 d.93.1.1 (A:77-177) Carboxyl-terminal src kinase (csk)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 40.8 bits (95), Expect = 3e-06
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKI 58
M WFH + RE+A +++ G FLVR S++ TL + G+ + I
Sbjct: 4 MPWFHGKITREQAERLLYPPETGLFLVRESTNYPGDYTLCVSCEGKVEHYRIMYHASKLS 63
Query: 59 GLG 61
Sbjct: 64 IDE 66
>d1opka2 d.93.1.1 (A:140-240) Abl tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 101
Score = 40.8 bits (95), Expect = 3e-06
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNKI 58
+W+H V+R A ++++G G FLVR S SS +++L Y GR Y+ I D K+
Sbjct: 5 HSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTASDGKL 64
Query: 59 GLGT 62
+ +
Sbjct: 65 YVSS 68
>d1i3za_ d.93.1.1 (A:) Ews/fli1 activated transcript 2, Eat2 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 103
Score = 40.8 bits (95), Expect = 3e-06
Identities = 17/98 (17%), Positives = 35/98 (35%), Gaps = 9/98 (9%)
Query: 1 MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
+ ++H + + ++ GG +G FL+R S S L L + + Y+ I +
Sbjct: 3 LPYYHGCLTKRECEALLLKGGVDGNFLIRDSESVPGALCLCVSFKKLVYSYRIFREKHGY 62
Query: 58 --IGLGTFKPNEVMAAREDATNH---PRDSHPCR-TQP 89
I P + ++ + P + P
Sbjct: 63 YRIETDAHTPRTIFPNLQELVSKYGKPGQGLVVHLSNP 100
>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 40.8 bits (95), Expect = 3e-06
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 1 MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
+A +H ++RE +++ A G +G +L+R S S L + Y G Y + + +
Sbjct: 4 VAVYHGKISRETGEKLLLATGLDGSYLLRDSESVPGVYCLCVLYHGYIYTYRVSQTETGS 63
>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2
(GRB2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 40.3 bits (94), Expect = 4e-06
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 1 MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDNK 57
MAWF + R +A +M++ G FL+R S S+ +L++ +G + + + K
Sbjct: 3 MAWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGK 62
>d1a81a2 d.93.1.1 (A:138-262) Syk tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 40.9 bits (95), Expect = 4e-06
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 1 MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNK 57
M WFH ++RE + Q+V G G FL+R ++ L L + G+ + I K K
Sbjct: 29 MPWFHGKISREESEQIVLIGSKTNGKFLIRARDNNGSYALCLLHEGKVLHYRIDKDKTGK 88
Query: 58 IGLGTFKPNEVMAAREDATNHPRDSHPCR-TQP 89
+ + K + + + ++ D T P
Sbjct: 89 LSIPEGKKFDTLWQLVEHYSYKADGLLRVLTVP 121
>d1luia_ d.93.1.1 (A:) Itk/tsk protein tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 108
Score = 40.4 bits (94), Expect = 5e-06
Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 1 MAWFH-SVNRERAVQMVAAGG-EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIRK 52
W++ S++R++A +++ G EG F+VR S + T++++ K
Sbjct: 6 YEWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTPGTYTVSVFTKAIISENPCIK 59
>d2qmsa1 d.93.1.1 (A:420-532) Growth factor receptor-bound protein
7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 39.6 bits (92), Expect = 1e-05
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 1 MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRDDN 56
WFH ++RE + +++ G +G FLVR S + L+L + + + I ++
Sbjct: 10 QLWFHGRISREESQRLIGQQGLVDGLFLVRESQRNPQGFVLSLCHLQKVKHYLILPSEEE 69
>d2fcia1 d.93.1.1 (A:1-105) Phospholipase C-gamma-1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 105
Score = 39.2 bits (91), Expect = 1e-05
Identities = 12/60 (20%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 1 MAWFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEPLTLTLWYGGRAYNIFIRKRDDNKI 58
W+H S+ R +A M+ G FLVR + ++ G+ + +++ +
Sbjct: 9 KEWYHASLTRAQAEHMLMRVPRDGAFLVRKRNEPNSYAISFRAEGKIKHCRVQQEGQTVM 68
>d2shpa3 d.93.1.1 (A:111-218) Tyrosine phoshatase shp-2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 108
Score = 37.8 bits (87), Expect = 4e-05
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 3 WFH-SVNRERAVQMVAAGGE-GCFLVRPSSSSEPL-TLTLWYGGRAYNIFIRKRDDN 56
WFH ++ + A +++ G+ G FLVR S S L++ G K
Sbjct: 2 WFHGHLSGKEAEKLLTEKGKHGSFLVRESQSHPGDFVLSVRTGDDKGESNDGKSKVT 58
>d2oq1a1 d.93.1.1 (A:5-134) Tyrosine-protein kinase zap-70 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 36.9 bits (85), Expect = 1e-04
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Query: 1 MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDN 56
+ +F+ S++R A + + G +G FL+R S L+L + R ++ I ++ +
Sbjct: 6 LPFFYGSISRAEAEEHLKLAGMADGLFLLRQCLRSLGGYVLSLVHDVRFHHFPIERQLNG 65
Query: 57 KIGLG 61
+
Sbjct: 66 TYAIA 70
>d1uura3 d.93.1.1 (A:577-707) STAT homologue {Dictyostelium
discoideum [TaxId: 44689]}
Length = 131
Score = 36.5 bits (84), Expect = 2e-04
Identities = 10/86 (11%), Positives = 25/86 (29%), Gaps = 5/86 (5%)
Query: 3 WFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNI--FIRKRDDNKI 58
+ + R+ + G F++R S + + I ++ + +D
Sbjct: 11 IIYGYMGRQEVNDALQNQDPGTFIIRFSERNPGQFGIAYIGVEMPARIKHYLVQPNDTAA 70
Query: 59 GLGTFKPNEVMAAREDATNHPRDSHP 84
TF P+ + +
Sbjct: 71 AKKTF-PDFLSEHSQFVNLLQWTKDT 95
>d1lkka_ d.93.1.1 (A:) p56-lck tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 105
Score = 36.2 bits (83), Expect = 2e-04
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 15/102 (14%)
Query: 1 MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIR--KRD 54
WF +++R+ A + + A G G FL+R S S+ +L++ + ++ K
Sbjct: 4 EPWFFKNLSRKDAERQLLAPGNTHGSFLIRESESTAGSFSLSVRDFDQNQGEVVKHYKIR 63
Query: 55 DNKIGLGTFKPNEVMAAREDATNHPRD---------SHPCRT 87
+ G P + H + S PC+T
Sbjct: 64 NLDNGGFYISPRITFPGLHELVRHYTNASDGLCTRLSRPCQT 105
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo
sapiens) [TaxId: 9606]}
Length = 104
Score = 34.3 bits (78), Expect = 7e-04
Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 10/97 (10%)
Query: 3 WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSS---EPLTLTLWYGGRAYNIFIRKRDDN 56
W+ + R+ A + + + G G FL+R S ++ L++ W + ++ K
Sbjct: 8 WYFGKLGRKDAERQLLSFGNPRGTFLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKL 67
Query: 57 KIGLGTFKPNEVMAAREDATNH---PRDSHPCR-TQP 89
G + H R P
Sbjct: 68 DNGGYYITTRAQFETLQQLVQHYSERAAGLSSRLVVP 104
>d1blja_ d.93.1.1 (A:) P55 Blk protein tyrosine kinase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 114
Score = 34.3 bits (78), Expect = 0.001
Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 10/99 (10%)
Query: 3 WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEPLTLTLWYGGRAYNIFIR--KRDDNK 57
WF +++R+ A + + A G FL+R S S++ ++ K
Sbjct: 14 WFFRTISRKDAERQLLAPMNKAGSFLIRESESNKGAFSLSVKDITTQGEVVKHYKIRSLD 73
Query: 58 IGLGTFKPNEVMAAREDATNHPR---DSHPCR-TQPRCV 92
G P + H D + T P CV
Sbjct: 74 NGGYYISPRITFPTLQALVQHYSKKGDGLCQKLTLP-CV 111
>d1mila_ d.93.1.1 (A:) Shc adaptor protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 33.8 bits (77), Expect = 0.001
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 1 MAWFH-SVNRERAVQMVAAGGEGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIRKRD 54
WFH ++R A ++ G FLVR S+++ LT G+ ++ + +
Sbjct: 7 EPWFHGKLSRREAEALLQL--NGDFLVRESTTTPGQYVLTGLQSGQPKHLLLVDPE 60
>d1a81a1 d.93.1.1 (A:9-137) Syk tyrosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 129
Score = 34.3 bits (78), Expect = 0.001
Identities = 14/69 (20%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 1 MAWFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSEP-LTLTLWYGGRAYNIFIRKRDDN 56
+ +F ++ RE A + GG +G +L+R S + L++ +G +A++ I + +
Sbjct: 5 LPFFFGNITREEAEDYLVQGGMSDGLYLLRQSRNYLGGFALSVAHGRKAHHYTIERELNG 64
Query: 57 KIGLGTFKP 65
+ +
Sbjct: 65 TYAIAGGRT 73
>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 33.2 bits (75), Expect = 0.002
Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 3 WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSSE-PLTLTLWYGGRAYNIFIR 51
WF ++R+ A + + A G G F++R S +++ +L++ ++
Sbjct: 3 WFFKGISRKDAERQLLAPGNMLGSFMIRDSETTKGSYSLSVRDYDPRQGDTVK 55
>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 106
Score = 33.1 bits (75), Expect = 0.002
Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 3 WFH-SVNRERAVQMVAAGG--EGCFLVRPSSSS-EPLTLTLWYGGRAYNIFIRKRDDNKI 58
W+ + R + +++ G FLVR S ++ L++ A + ++ K+
Sbjct: 7 WYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKL 66
Query: 59 GLGTF 63
G F
Sbjct: 67 DSGGF 71
>d1btea_ g.7.1.3 (A:) Type II activin receptor {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 25.2 bits (55), Expect = 1.2
Identities = 4/20 (20%), Positives = 6/20 (30%)
Query: 81 DSHPCRTQPRCVITSRPRGV 100
D C + C+ V
Sbjct: 56 DDINCYDRTDCIEKKDSPEV 75
>d1nrfa_ e.3.1.1 (A:) Penicillin receptor BlaR, C-terminal domain
{Bacillus licheniformis [TaxId: 1402]}
Length = 246
Score = 26.3 bits (57), Expect = 1.3
Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 1/85 (1%)
Query: 45 AYNIFIRKRDDNKIGLG-TFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLR 103
Y I+ RK ++ T+K + A E DSH + + L
Sbjct: 34 KYTIYNRKESTSRFAPASTYKVFSALLALESGIITKNDSHMTWDGTQYPYKEWNQDQDLF 93
Query: 104 WRLSRIMFRHLADYNKLSGVQRAMW 128
+S + ++ G
Sbjct: 94 SAMSSSTTWYFQKLDRQIGEDHLRH 118
>d1k38a_ e.3.1.1 (A:) Class D beta-lactamase {Salmonella
typhimurium, OXA-2 [TaxId: 90371]}
Length = 241
Score = 25.9 bits (56), Expect = 1.4
Identities = 9/67 (13%), Positives = 15/67 (22%)
Query: 62 TFKPNEVMAAREDATNHPRDSHPCRTQPRCVITSRPRGVVLRWRLSRIMFRHLADYNKLS 121
TFK + A + + LR + + K
Sbjct: 49 TFKIPHTLFALDAGAVRDEFQIFRWDGVNRGFAGHNQDQDLRSAMRNSTVWVYELFAKEI 108
Query: 122 GVQRAMW 128
G +A
Sbjct: 109 GDDKARR 115
>d1pkpa2 d.50.1.2 (A:4-77) Ribosomal S5 protein, N-terminal domain
{Bacillus stearothermophilus [TaxId: 1422]}
Length = 74
Score = 24.6 bits (54), Expect = 1.8
Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%)
Query: 42 GGR--AYNIFIRKRDDN-KIGLGTFKPNEVMAAREDATNH 78
GGR ++ + D N +G GT K EV A A
Sbjct: 24 GGRRLRFSALVVVGDKNGHVGFGTGKAQEVPEAIRKAIED 63
>d1bf5a3 d.93.1.1 (A:569-710) STAT-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 142
Score = 24.8 bits (54), Expect = 3.1
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 10/88 (11%)
Query: 7 VNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTLWYGGRAYNIFIR---------KRDDNK 57
+++ER ++ G FL+R S SS +T + R+ N K++ +
Sbjct: 14 ISKERERALLKDQQPGTFLLRFSESSREGAITFTWVERSQNGGEPDFHAVEPYTKKELSA 73
Query: 58 IGLGTFKPN-EVMAAREDATNHPRDSHP 84
+ N +VMAA N + +P
Sbjct: 74 VTFPDIIRNYKVMAAENIPENPLKYLYP 101
>d2qale2 d.50.1.2 (E:9-77) Ribosomal S5 protein, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 69
Score = 23.8 bits (52), Expect = 3.6
Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 42 GGR--AYNIFIRKRDDN-KIGLGTFKPNEVMAAREDATNH 78
GGR ++ D N ++G G K EV AA + A
Sbjct: 18 GGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEK 57
>d2h62d1 g.7.1.3 (D:8-98) Type II activin receptor {Mouse (Mus
musculus), isoform IIB [TaxId: 10090]}
Length = 91
Score = 23.3 bits (50), Expect = 5.8
Identities = 6/20 (30%), Positives = 7/20 (35%)
Query: 81 DSHPCRTQPRCVITSRPRGV 100
D C + CV T V
Sbjct: 55 DDFNCYDRQECVATEENPQV 74
>d2al6a2 b.55.1.5 (A:254-363) Focal adhesion kinase 1 {Chicken
(Gallus gallus) [TaxId: 9031]}
Length = 110
Score = 23.2 bits (50), Expect = 8.3
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 1 MAWFHSVNRERAVQMVAAGGEGCFLVRPSSSSEPLTLTL 39
+A F+ V + +G ++ + + EPLT+T
Sbjct: 40 LADFNQVQTIQYSNSEDKDRKGMLQLKIAGAPEPLTVTA 78
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.325 0.136 0.445
Gapped
Lambda K H
0.267 0.0715 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 475,154
Number of extensions: 19253
Number of successful extensions: 87
Number of sequences better than 10.0: 1
Number of HSP's gapped: 87
Number of HSP's successfully gapped: 46
Length of query: 128
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 53
Effective length of database: 1,377,846
Effective search space: 73025838
Effective search space used: 73025838
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 48 (22.3 bits)