BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9698
(123 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1AOZ|A Chain A, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1AOZ|B Chain B, Refined Crystal Structure Of Ascorbate Oxidase At 1.9
Angstroms Resolution
pdb|1ASO|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASO|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASP|A Chain A, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASP|B Chain B, X-ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-forms
pdb|1ASQ|A Chain A, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
pdb|1ASQ|B Chain B, X-Ray Structures And Mechanistic Implications Of Three
Functional Derivatives Of Ascorbate Oxidase From
Zucchini: Reduced-, Peroxide-, And Azide-Forms
Length = 552
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 39 RPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDRK 90
P +++TV P G+T +R +NPG+W FHCH H GM +VF G K
Sbjct: 476 NPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEK 527
>pdb|2HZH|A Chain A, Crystal Structure Of Laccase From Coriolus Zonatus At 2.6
A Resolution
Length = 499
Score = 42.4 bits (98), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 40 PIVKDTVGN-LPSGYTVVRVHF--NNPGMWYFHCHFVMHTDTGMTLVF 84
PI +DTV P+ V + F NNPG W+ HCH H + G +VF
Sbjct: 420 PIFRDTVSTGTPAANDNVTIRFKTNNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|3T9W|A Chain A, Small Laccase From Amycolatopsis Sp. Atcc 39116
pdb|3TA4|F Chain F, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|D Chain D, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
pdb|3TA4|E Chain E, Small Laccase From Amycolatopsis Sp. Atcc 39116 Complexed
With 1-(3,4-
Dimethoxyphenyl)-2-(2-Methoxyphenoxy)-1,
3-Dihydroxypropane
Length = 299
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 24 RQLD-QEGPRLRTTQPRPIV--KDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGM 80
R LD + G R P P++ KD + G+ V+ PGMW +HCH H+D GM
Sbjct: 220 RWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSDMGM 279
Query: 81 TLVFQV 86
+F V
Sbjct: 280 AGMFLV 285
>pdb|2XYB|A Chain A, Crystal Structure Of A Fully Functional Laccase From The
Ligninolytic Fungus Pycnoporus Cinnabarinus
Length = 497
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 39 RPIVKDTVG-NLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
PI +D V P +R NNPG W+ HCH H D G +V
Sbjct: 419 NPIFRDVVSTGQPGDNVTIRFETNNPGPWFLHCHIDFHLDAGFAVV 464
>pdb|3PPS|A Chain A, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|B Chain B, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|C Chain C, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
pdb|3PPS|D Chain D, Crystal Structure Of An Ascomycete Fungal Laccase From
Thielavia Arenaria
Length = 604
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Query: 31 PRLRTTQPRPIVKDTVGNLPSG-YTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
PRL+ P V+ V LP+G + ++ +NPG W FHCH H G+++ F
Sbjct: 507 PRLKGNNP---VRRDVTMLPAGGWLLLAFKTDNPGAWLFHCHIAWHVSGGLSVDF 558
>pdb|3V9E|A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada
Length = 580
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 38 PRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
PR V GN GY + +NPG W HCH H GM + F
Sbjct: 497 PRRDVAALPGN---GYLAIAFKLDNPGSWLLHCHIAWHASEGMAMQF 540
>pdb|1KYA|A Chain A, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|B Chain B, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|C Chain C, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
pdb|1KYA|D Chain D, Active Laccase From Trametes Versicolor Complexed With
2,5-Xylidine
Length = 499
Score = 39.7 bits (91), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 40 PIVKDTV--GNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
PI +D V G +G V +R +NPG W+ HCH H + G +VF
Sbjct: 420 PIFRDVVSTGTPAAGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVVF 467
>pdb|3T6V|A Chain A, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|B Chain B, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6V|C Chain C, Crystal Structure Of Laccase From Steccherinum Ochraceum
pdb|3T6W|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6W|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (10% Dose)
pdb|3T6X|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6X|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (20% Dose)
pdb|3T6Z|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T6Z|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (60% Dose)
pdb|3T71|A Chain A, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|B Chain B, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
pdb|3T71|C Chain C, Crystal Structure Of Steccherinum Ochraceum Laccase
Obtained By Multi- Crystals Composite Data Collection
Technique (90% Dose)
Length = 495
Score = 39.3 bits (90), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 40 PIVKDTVGNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
PI +D V G V +R +NPG W+ HCH H D G +VF
Sbjct: 422 PIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVF 467
>pdb|1HFU|A Chain A, Type-2 Cu-Depleted Laccase From Coprinus Cinereus At 1.68
A Resolution
Length = 503
Score = 39.3 bits (90), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 40 PIVKDTVGNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
P+ +D V +G V +R +NPG W+FHCH H G+ +VF
Sbjct: 421 PVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|3SQR|A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67
A Resolution
Length = 580
Score = 39.3 bits (90), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
Query: 38 PRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
PR V GN GY + +NPG W HCH H G+ + F
Sbjct: 497 PRRDVAALPGN---GYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQF 540
>pdb|1GYC|A Chain A, Crystal Structure Determination At Room Temperature Of A
Laccase From Trametes Versicolor In Its Oxidised Form
Containing A Full Complement Of Copper Ions
Length = 499
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 40 PIVKDTV--GNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLVF--QVGDRK 90
PI +D V G +G V +R +NPG W+ HCH H + G +VF V D K
Sbjct: 420 PIFRDVVSTGTPAAGDNVTIRFQTDNPGPWFLHCHIDFHLEAGFAIVFAEDVADVK 475
>pdb|3KW7|A Chain A, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
pdb|3KW7|B Chain B, Crystal Structure Of Lacb From Trametes Sp. Ah28-2
Length = 502
Score = 38.9 bits (89), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 40 PIVKDTV--GNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
P+ +DTV GN P +R +N G W+ HCH H + G +VF
Sbjct: 425 PVRRDTVSTGN-PGDNVTIRFTTDNAGPWFLHCHIDFHLEAGFAIVF 470
>pdb|1A65|A Chain A, Type-2 Cu-depleted Laccase From Coprinus Cinereus
Length = 504
Score = 38.5 bits (88), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 39 RPIVKDTVGNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
P+ +D V +G V +R +NPG W+FHCH H G+ +VF
Sbjct: 420 NPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVF 466
>pdb|4A2F|A Chain A, Coriolopsis Gallica Laccase Collected At 12.65 Kev
Length = 497
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 40 PIVKDTVGN-LPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
P+ +D V P +R +NPG W+ HCH H + G +V
Sbjct: 419 PVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVV 463
>pdb|4A2D|A Chain A, Coriolopsis Gallica Laccase T2 Copper Depleted At Ph 4.5
pdb|4A2E|A Chain A, Crystal Structure Of A Coriolopsis Gallica Laccase At 1.7
A Resolution Ph 5.5
pdb|4A2H|A Chain A, Crystal Structure Of Laccase From Coriolopsis Gallica Ph
7.0
pdb|4A2G|A Chain A, Coriolopsis Gallica Laccase Collected At 8.98 Kev
Length = 496
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 40 PIVKDTVGN-LPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
P+ +D V P +R +NPG W+ HCH H + G +V
Sbjct: 419 PVYRDVVSTGAPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVV 463
>pdb|1ZPU|A Chain A, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|B Chain B, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|C Chain C, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|D Chain D, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|E Chain E, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
pdb|1ZPU|F Chain F, Crystal Structure Of Fet3p, A Multicopper Oxidase That
Functions In Iron Import
Length = 534
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 40 PIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMH 75
P+ +DT+ P V+R +NPG+W+FHCH H
Sbjct: 433 PMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWH 468
>pdb|2HRG|A Chain A, Crystal Structure Of Blue Laccase From Trametes Trogii
Complexed With P-Methylbenzoate
pdb|2HRH|A Chain A, Crystal Strucure Of Blue Laccase From Trametes Trogii
Length = 496
Score = 37.7 bits (86), Expect = 0.001, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 40 PIVKDTVGN-LPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
P+ +D V P +R +NPG W+ HCH H + G +V
Sbjct: 419 PVYRDVVSTGSPGDNVTIRFRTDNPGPWFLHCHIDFHLEAGFAVV 463
>pdb|2Q9O|A Chain A, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|2Q9O|B Chain B, Near-Atomic Resolution Structure Of A Melanocarpus
Albomyces Laccase
pdb|3FU7|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU8|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
pdb|3FU8|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (10 Sec)
With 2,6- Dimethoxyphenol
Length = 559
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 34 RTTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
R P +DT G+ ++ +NPG W FHCH H G+++ F
Sbjct: 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|1GW0|A Chain A, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|1GW0|B Chain B, Crystal Structure Of Laccase From Melanocarpus Albomyces
In Four Copper Form
pdb|2IH8|A Chain A, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH8|B Chain B, A Low-dose Crystal Structure Of A Recombinant Melanocarpus
Albomyces Laccase
pdb|2IH9|A Chain A, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|2IH9|B Chain B, A High-Dose Crystal Structure Of A Recombinant
Melanocarbus Albomyces Laccase
pdb|3FU7|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (4 Sec) With
2,6- Dimethoxyphenol
pdb|3FU9|A Chain A, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3FU9|B Chain B, Melanocarpus Albomyces Laccase Crystal Soaked (20 Min)
With 2,6- Dimethoxyphenol
pdb|3QPK|A Chain A, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
pdb|3QPK|B Chain B, Probing Oxygen Channels In Melanocarpus Albomyces Laccase
Length = 559
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 34 RTTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
R P +DT G+ ++ +NPG W FHCH H G+++ F
Sbjct: 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|3DKH|A Chain A, L559a Mutant Of Melanocarpus Albomyces Laccase
pdb|3DKH|B Chain B, L559a Mutant Of Melanocarpus Albomyces Laccase
Length = 559
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 34 RTTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
R P +DT G+ ++ +NPG W FHCH H G+++ F
Sbjct: 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDF 517
>pdb|3PXL|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta
Length = 499
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 39 RPIVKDTV--GNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
PI +D V G +G V +R NNPG W+ HCH H + G +V
Sbjct: 419 NPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVV 466
>pdb|3FPX|A Chain A, Native Fungus Laccase From Trametes Hirsuta
pdb|3V9C|A Chain A, Type-2 Cu-Depleted Fungus Laccase From Trametes Hirsuta At
Low Dose Of Ionization Radiation
Length = 499
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 39 RPIVKDTV--GNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
PI +D V G +G V +R NNPG W+ HCH H + G +V
Sbjct: 419 NPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVV 466
>pdb|1V10|A Chain A, Structure Of Rigidoporus Lignosus Laccase From
Hemihedrally Twinned Crystals
Length = 521
Score = 37.0 bits (84), Expect = 0.003, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 40 PIVKDTVGNLPSGYTVV-RVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
P+ +D V G V R +NPG W+ HCH H + G+ +VF
Sbjct: 442 PVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVF 487
>pdb|2H5U|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.9a
Resolution
Length = 499
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 39 RPIVKDTV--GNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
PI +D V G +G V +R NNPG W+ HCH H + G +V
Sbjct: 419 NPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVV 466
>pdb|3DIV|A Chain A, Crystal Structure Of Laccase From Cerrena Maxima At 1.76a
Resolution
Length = 499
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 39 RPIVKDTV--GNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
PI +D V G +G V +R NNPG W+ HCH H + G +V
Sbjct: 419 NPIFRDVVSTGTPAAGDNVTIRFLTNNPGPWFLHCHIDFHLEGGFAVV 466
>pdb|2QT6|A Chain A, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
pdb|2QT6|B Chain B, Crystal Structure Determination Of A Blue Laccase From
Lentinus Tigrinus
Length = 498
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 40 PIVKDTV--GNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLV 83
P+ +D V G +G V +R +NPG W+ HCH H D G +V
Sbjct: 419 PVWRDVVSTGTPQAGDNVTIRFQTDNPGPWFLHCHIDFHLDAGFAVV 465
>pdb|2J5W|A Chain A, Ceruloplasmin Revisited: Structural And Functional Roles Of
Various Metal Cation Binding Sites
Length = 1065
Score = 34.3 bits (77), Expect = 0.020, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
D P Y + + PG+W HCH H GM + V
Sbjct: 1014 DVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 1056
Score = 28.9 bits (63), Expect = 0.84, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
DT+ P+ + NPG W C + H G+ FQV
Sbjct: 312 DTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQV 354
>pdb|1KCW|A Chain A, X-Ray Crystal Structure Of Human Ceruloplasmin At 3.0
Angstroms
Length = 1046
Score = 34.3 bits (77), Expect = 0.020, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 17/43 (39%)
Query: 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
D P Y + + PG+W HCH H GM + V
Sbjct: 995 DVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTV 1037
Score = 28.9 bits (63), Expect = 0.83, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
DT+ P+ + NPG W C + H G+ FQV
Sbjct: 293 DTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQV 335
>pdb|2YXV|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXV|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|A Chain A, The Deletion Mutant Of Multicopper Oxidase Cueo
pdb|2YXW|B Chain B, The Deletion Mutant Of Multicopper Oxidase Cueo
Length = 446
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQVG 87
KDTV + + V V FN+ + HCH + H DTGM L F VG
Sbjct: 394 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVG 441
>pdb|3TAS|A Chain A, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|B Chain B, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TAS|C Chain C, Small Laccase From Streptomyces Viridosporus T7a
pdb|3TBB|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBB|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form.
pdb|3TBC|A Chain A, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|B Chain B, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone.
pdb|3TBC|C Chain C, Small Laccase From Streptomyces Viridosporus T7a;
Alternate Crystal Form Complexed With Acetovanillone
Length = 313
Score = 33.1 bits (74), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 52 GYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
G+ V+ G W +HCH H+D GM +F V
Sbjct: 235 GFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLV 269
>pdb|3CG8|A Chain A, Laccase From Streptomyces Coelicolor
pdb|3CG8|B Chain B, Laccase From Streptomyces Coelicolor
pdb|3CG8|C Chain C, Laccase From Streptomyces Coelicolor
Length = 343
Score = 32.7 bits (73), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 52 GYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
G+ ++ G W +HCH H+D GM +F V
Sbjct: 270 GFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLV 304
>pdb|3QQX|A Chain A, Reduced Native Intermediate Of The Multicopper Oxidase
Cueo
Length = 505
Score = 32.7 bits (73), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQV--GDRKQFVRAP 96
KDTV + + V V FN+ + HCH + H DTGM L F V GD +
Sbjct: 442 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHDDTGMMLGFTVLQGDHGLSAWSH 500
Query: 97 PHFPQ 101
P+F +
Sbjct: 501 PNFEK 505
>pdb|2CF2|C Chain C, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|L Chain L, Architecture Of Mammalian Fatty Acid Synthase
Length = 342
Score = 32.3 bits (72), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFV 73
+T GN GY + N P +W+F CHF+
Sbjct: 44 ETGGNFDKGYVEAELDIN-PDLWFFGCHFI 72
Score = 32.3 bits (72), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFV 73
+T GN GY + N P +W+F CHF+
Sbjct: 215 ETGGNFDKGYVEAELDIN-PDLWFFGCHFI 243
>pdb|1MKB|A Chain A, Escherichia Coli Beta-Hydroxydecanoyl Thiol Ester
Dehydrase At Ph 5 And 21 Degrees C
pdb|1MKB|B Chain B, Escherichia Coli Beta-Hydroxydecanoyl Thiol Ester
Dehydrase At Ph 5 And 21 Degrees C
pdb|1MKA|A Chain A, E. Coli Beta-Hydroxydecanoyl Thiol Ester Dehydrase
Modified By Its Classic Mechanism-Based Inactivator,
3-Decynoyl-N- Acetyl Cysteamine
pdb|1MKA|B Chain B, E. Coli Beta-Hydroxydecanoyl Thiol Ester Dehydrase
Modified By Its Classic Mechanism-Based Inactivator,
3-Decynoyl-N- Acetyl Cysteamine
Length = 171
Score = 32.3 bits (72), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFV 73
+T GN GY + N P +W+F CHF+
Sbjct: 44 ETGGNFDKGYVEAELDIN-PDLWFFGCHFI 72
>pdb|4GY4|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GY4|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 278
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 52 GYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
G+ ++ G W +HCH H+D GM +F V
Sbjct: 232 GFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLV 266
>pdb|3NSF|A Chain A, Apo Form Of The Multicopper Oxidase Cueo
Length = 505
Score = 32.3 bits (72), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQV--GDRKQFVRAP 96
KDTV + + V V FN+ + HCH + H DTGM L F V GD +
Sbjct: 442 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTVLQGDHGLSAWSH 500
Query: 97 PHFPQ 101
P F +
Sbjct: 501 PQFEK 505
>pdb|4GXF|A Chain A, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|B Chain B, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
pdb|4GXF|C Chain C, Role Of The Biradical Intermediate Observed During The
Turnover Of Slac: A Two-Domain Laccase From Streptomyces
Coelicolor
Length = 279
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 52 GYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
G+ ++ G W +HCH H+D GM +F V
Sbjct: 233 GFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLV 267
>pdb|3KW8|A Chain A, Two-Domain Laccase From Streptomyces Coelicolor At 2.3 A
Resolution
Length = 276
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 52 GYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
G+ ++ G W +HCH H+D GM +F V
Sbjct: 229 GFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLV 263
>pdb|2R7E|A Chain A, Crystal Structure Analysis Of Coagulation Factor Viii
Length = 742
Score = 31.6 bits (70), Expect = 0.12, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 35 TTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
T + + + +DT+ P V + NPG+W CH + GMT + +V
Sbjct: 658 TFKHKMVYEDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKV 709
>pdb|3NSY|A Chain A, The Multi-Copper Oxidase Cueo With Six Met To Ser
Mutations (M358s, M361s,M362s,M364s,M366s,M368s)
Length = 511
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQV 86
KDTV + + V V FN+ + HCH + H DTGM L F V
Sbjct: 442 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488
>pdb|1KV7|A Chain A, Crystal Structure Of Cueo, A Multi-Copper Oxidase From E.
Coli Involved In Copper Homeostasis
pdb|1N68|A Chain A, Copper Bound To The Multicopper Oxidase Cueo
pdb|2FQD|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQE|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQF|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|2FQG|A Chain A, Crystal Structures Of E. Coli Laccase Cueo Under Different
Copper Binding Situations
pdb|3NSD|A Chain A, Silver Bound To The Multicopper Oxidase Cueo (Untagged)
pdb|3OD3|A Chain A, Cueo At 1.1 A Resolution Including Residues In Previously
Disordered Region
pdb|3PAU|A Chain A, Cueo In The Resting Oxidized State
pdb|3PAV|A Chain A, The Reduced Form Of Cueo
Length = 488
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQV 86
KDTV + + V V FN+ + HCH + H DTGM L F V
Sbjct: 442 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488
>pdb|3CDZ|A Chain A, Crystal Structure Of Human Factor Viii
Length = 754
Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 35 TTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86
T + + + +DT+ P V + NPG+W CH + GMT + +V
Sbjct: 657 TFKHKMVYEDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKV 708
>pdb|1PF3|A Chain A, Crystal Structure Of The M441l Mutant Of The Multicopper
Oxidase Cueo
Length = 498
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQV 86
KDTV + + V V FN+ + HCH + H DTGM L F V
Sbjct: 442 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488
>pdb|3G5W|A Chain A, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|B Chain B, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|C Chain C, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|D Chain D, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|E Chain E, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
pdb|3G5W|F Chain F, Crystal Structure Of Blue Copper Oxidase From Nitrosomonas
Europaea
Length = 318
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 39 RPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTG 79
+PI DTV P V ++ +NPG+W H H HT G
Sbjct: 221 KPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNG 261
>pdb|2XU9|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27
pdb|2XUW|A Chain A, Crystal Structure Of Apolaccase From Thermus Thermophilus
Hb27
pdb|2XVB|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 5 Min. In 5 Mm Hgcl2 At 278 K.
pdb|4AI7|A Chain A, Crystal Structure Of Laccase From Thermus Thermophilus
Hb27 Complexed With Hg, Crystal Of The Apoenzyme Soaked
For 2 H In 5 Mm Hgcl2 At 278 K.
pdb|2YAE|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27(0.0-12.5 Percent Dose)
pdb|2YAF|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (12.5-25.0 Percent Dose)
pdb|2YAH|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (25.0-37.5 Percent Dose)
pdb|2YAM|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (37.5-50.0 Percent Dose)
pdb|2YAO|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (50.0-62.5 Percent Dose)
pdb|2YAP|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (62.5-75.0 Percent Dose)
pdb|2YAQ|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (75.0-87.5 Percent Dose)
pdb|2YAR|A Chain A, X-Ray Induced Reduction Of Laccase From Thermus
Thermophilus Hb27 (87.5-100.0 Percent Dose)
Length = 439
Score = 31.2 bits (69), Expect = 0.16, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 43 KDTVGNLPSGYTV-VRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87
KD V NL +G + V G FHCH V H D GM V +VG
Sbjct: 395 KDVV-NLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439
>pdb|3ABG|A Chain A, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|3ABG|B Chain B, X-Ray Crystal Analysis Of Bilirubin Oxidase From
Myrothecium Verrucaria At 2.3 Angstrom Resolution Using
A Twin Crystal
pdb|2XLL|A Chain A, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|B Chain B, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|C Chain C, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
pdb|2XLL|D Chain D, The Crystal Structure Of Bilirubin Oxidase From
Myrothecium Verrucaria
Length = 534
Score = 30.8 bits (68), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 29 EGPRLRTTQP-RPIVKDTVGNLPSGYTVVRVHFNN-PGMWYFHCHFVMHTDTGMTLVFQV 86
G RT P +KD V VV H+ PG++ FHCH ++H D M F
Sbjct: 414 SGNNARTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNA 473
>pdb|3ZX1|A Chain A, Multicopper Oxidase From Campylobacter Jejuni: A
Metallo-Oxidase
Length = 481
Score = 30.0 bits (66), Expect = 0.35, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 42 VKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGM 80
++DT+ P+ +R+ + G+ +HCH + H D GM
Sbjct: 435 LRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGM 473
>pdb|3UAA|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data1)
pdb|3UAB|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data2)
pdb|3UAC|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data4)
pdb|3UAD|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data5)
pdb|3UAE|A Chain A, Multicopper Oxidase Cueo Mutant C500se506q (Data6)
Length = 489
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQVG 87
KDTV + + V V FN+ + H H + H DTGM L F VG
Sbjct: 442 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHSHLLEHQDTGMMLGFTVG 489
>pdb|3GYR|A Chain A, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|B Chain B, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|C Chain C, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|D Chain D, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|E Chain E, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|F Chain F, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|G Chain G, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|H Chain H, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|I Chain I, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|J Chain J, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|K Chain K, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center.
pdb|3GYR|L Chain L, Structure Of Phenoxazinone Synthase From Streptomyces
Antibioticus Reveals A New Type 2 Copper Center
Length = 612
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 32 RLRTTQPRPIVKDTVGNL-------PSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVF 84
RL P P+ + +G+ P G V+ G + +HCH + H D GM F
Sbjct: 528 RLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPF 587
Query: 85 QV 86
V
Sbjct: 588 VV 589
>pdb|3NSC|A Chain A, C500s Mutant Of Cueo Bound To Cu(Ii)
pdb|3NT0|A Chain A, C500s (T1d) Mutant Of Cueo Soaked In And Bound To Cu(I)
Length = 505
Score = 28.9 bits (63), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 43 KDTVGNLPSGYTVVRVHFNNPG----MWYFHCHFVMHTDTGMTLVFQV--GDRKQFVRAP 96
KDTV + + V V FN+ + H H + H DTGM L F V GD +
Sbjct: 442 KDTV-KVEGNVSEVLVKFNHDAPKEHAYMAHSHLLEHEDTGMMLGFTVLQGDHGLSAWSH 500
Query: 97 PHFPQ 101
P F +
Sbjct: 501 PQFEK 505
>pdb|4B8U|A Chain A, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With
N-isobutyl-2-(5-(2-thienyl)-1,
2-oxazol-3-yl-)methoxy)acetamide
pdb|4B8U|B Chain B, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With
N-isobutyl-2-(5-(2-thienyl)-1,
2-oxazol-3-yl-)methoxy)acetamide
pdb|4B8U|C Chain C, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With
N-isobutyl-2-(5-(2-thienyl)-1,
2-oxazol-3-yl-)methoxy)acetamide
pdb|4B8U|D Chain D, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With
N-isobutyl-2-(5-(2-thienyl)-1,
2-oxazol-3-yl-)methoxy)acetamide
pdb|4B8U|E Chain E, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With
N-isobutyl-2-(5-(2-thienyl)-1,
2-oxazol-3-yl-)methoxy)acetamide
pdb|4B0B|A Chain A, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 3-(pyridin-2-yloxy)aniline
pdb|4B0B|B Chain B, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 3-(pyridin-2-yloxy)aniline
pdb|4B0C|A Chain A, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 3-(pentylthio)-4h-1,2,4-triazole
pdb|4B0C|B Chain B, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 3-(pentylthio)-4h-1,2,4-triazole
pdb|4B0C|C Chain C, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 3-(pentylthio)-4h-1,2,4-triazole
pdb|4B0C|D Chain D, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 3-(pentylthio)-4h-1,2,4-triazole
pdb|4B0C|E Chain E, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 3-(pentylthio)-4h-1,2,4-triazole
pdb|4B0J|A Chain A, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|B Chain B, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|C Chain C, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|D Chain D, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|E Chain E, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|F Chain F, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|G Chain G, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|H Chain H, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|I Chain I, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|J Chain J, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|K Chain K, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|L Chain L, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|M Chain M, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|N Chain N, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|O Chain O, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|P Chain P, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|Q Chain Q, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|R Chain R, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|S Chain S, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
pdb|4B0J|T Chain T, Crystal Structure Of 3-hydroxydecanoyl-acyl Carrier
Protein Dehydratase (faba) From Pseudomonas Aeruginosa
In Complex With 5-(2- Thienyl)-3-isoxazolyl Methanol
Length = 171
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Query: 42 VKDTVGNLPSGYTVVRVHFNNPGMWYFHCHF 72
+ D G G V + N P +W+F CHF
Sbjct: 42 ISDVGGKYGKGELVAELDIN-PDLWFFACHF 71
>pdb|3Q62|A Chain A, Crystal Structure Of 3-Hydroxydecanoyl-(Acyl Carrier
Protein) Dehydratase From Yersinia Pestis
pdb|3Q62|B Chain B, Crystal Structure Of 3-Hydroxydecanoyl-(Acyl Carrier
Protein) Dehydratase From Yersinia Pestis
Length = 175
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Query: 47 GNLPSGYTVVRVHFNNPGMWYFHCHFV 73
G+ GY + N P +W+F CHF+
Sbjct: 51 GSHNKGYVEAELDIN-PDLWFFGCHFI 76
>pdb|3AW5|A Chain A, Structure Of A Multicopper Oxidase From The
Hyperthermophilic Archaeon Pyrobaculum Aerophilum
Length = 448
Score = 26.6 bits (57), Expect = 3.3, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 42 VKDTVGNLPSGYTVVRVHFNNPG---MWYFHCHFVMHTDTGMTL 82
+KDTV P + V+F+ ++ FHCH + H D GM +
Sbjct: 400 LKDTVLIWPGETVKIVVNFDAKKRGQLFPFHCHNLEHEDGGMMI 443
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,971,157
Number of Sequences: 62578
Number of extensions: 151365
Number of successful extensions: 360
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 303
Number of HSP's gapped (non-prelim): 59
length of query: 123
length of database: 14,973,337
effective HSP length: 85
effective length of query: 38
effective length of database: 9,654,207
effective search space: 366859866
effective search space used: 366859866
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)