Query psy9698
Match_columns 123
No_of_seqs 130 out of 1071
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 17:19:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9698.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9698hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 99.9 6.5E-25 2.2E-29 185.6 5.0 90 1-107 454-543 (552)
2 3sqr_A Laccase; multicopper ox 99.8 3.8E-22 1.3E-26 170.9 3.8 90 1-106 472-565 (580)
3 2q9o_A Laccase-1; multicopper 99.8 9E-22 3.1E-26 167.0 2.5 73 34-106 467-544 (559)
4 1v10_A Laccase; multicopper bl 99.8 2.4E-21 8.3E-26 163.1 4.5 73 35-107 437-513 (521)
5 1hfu_A Laccase 1; oxidoreducta 99.8 3.7E-21 1.3E-25 161.3 2.0 73 35-107 416-492 (503)
6 1zpu_A Iron transport multicop 99.8 9.3E-21 3.2E-25 160.2 3.8 73 37-110 430-508 (534)
7 3pxl_A Laccase; 4-copper prote 99.8 1.9E-20 6.5E-25 157.6 2.7 72 34-106 414-492 (499)
8 3t6v_A Laccase; beta barrel, o 99.8 2E-20 6.8E-25 157.2 1.5 72 34-106 416-492 (495)
9 2xu9_A Laccase; oxidoreductase 99.7 5.1E-18 1.7E-22 139.8 6.0 51 37-87 389-439 (439)
10 3abg_A Bilirubin oxidase; clea 99.7 1.5E-17 5.2E-22 140.7 8.5 72 35-107 422-496 (534)
11 3gyr_A PHS, phenoxazinone synt 99.7 6.9E-18 2.3E-22 142.3 5.4 56 35-90 537-593 (612)
12 2wsd_A Spore coat protein A; o 99.6 7.3E-16 2.5E-20 129.4 6.1 49 40-88 461-510 (513)
13 3aw5_A Multicopper oxidase; be 99.6 9.5E-16 3.2E-20 127.0 3.0 48 38-87 396-448 (448)
14 3zx1_A Oxidoreductase, putativ 99.5 3.3E-15 1.1E-19 125.3 5.9 49 39-87 432-480 (481)
15 2g23_A PHS, phenoxazinone synt 99.5 3.2E-15 1.1E-19 128.7 5.5 61 36-97 538-599 (612)
16 2uxt_A Protein SUFI, SUFI; oxi 99.5 3.6E-15 1.2E-19 123.5 4.7 52 35-88 386-441 (451)
17 3tas_A Small laccase, multi-co 99.4 3.4E-13 1.2E-17 106.9 8.6 54 37-90 217-273 (313)
18 3cg8_A Laccase; oxidoreductase 99.4 5.3E-13 1.8E-17 107.3 8.0 64 39-104 254-320 (343)
19 3gdc_A Multicopper oxidase; be 99.4 2.5E-13 8.5E-18 106.5 5.1 50 38-87 238-287 (288)
20 3kw8_A Laccase, putative coppe 99.4 6.7E-13 2.3E-17 103.4 7.3 50 40-89 214-266 (276)
21 3t9w_A Small laccase, multi-co 99.3 1.3E-12 4.4E-17 103.2 7.0 53 37-89 233-288 (299)
22 2j5w_A Ceruloplasmin, ferroxid 99.3 8E-13 2.7E-17 119.3 5.6 49 40-88 1010-1058(1065)
23 3od3_A Blue copper oxidase CUE 99.3 6.5E-13 2.2E-17 111.7 4.5 46 40-86 439-488 (488)
24 3g5w_A Multicopper oxidase typ 99.3 2.2E-12 7.6E-17 102.6 6.0 51 38-88 220-276 (318)
25 2dv6_A Nitrite reductase; elec 99.3 9.5E-12 3.3E-16 101.7 7.3 50 39-88 383-433 (447)
26 2zwn_A Two-domain type laccase 99.2 9.1E-11 3.1E-15 93.7 8.5 51 38-88 221-277 (339)
27 1sdd_B Coagulation factor V; c 99.1 6.1E-11 2.1E-15 101.6 5.6 51 38-88 277-327 (647)
28 1sdd_A Coagulation factor V; c 99.0 1.1E-11 3.7E-16 97.8 -1.4 50 39-88 251-300 (306)
29 2r7e_A Coagulation factor VIII 99.0 1.1E-11 3.8E-16 108.5 -1.6 49 40-88 663-711 (742)
30 2r7e_B Coagulation factor VIII 99.0 5.4E-11 1.8E-15 104.7 0.1 49 39-87 407-455 (770)
31 2r7e_A Coagulation factor VIII 98.9 1.8E-10 6E-15 100.9 2.1 49 40-88 281-329 (742)
32 2bw4_A Copper-containing nitri 98.9 2.1E-09 7.1E-14 85.3 7.5 47 42-88 277-324 (340)
33 1mzy_A Copper-containing nitri 98.9 1.8E-09 6E-14 85.6 5.9 47 42-88 271-318 (333)
34 2aan_A Auracyanin A; cupredoxi 98.8 6.8E-09 2.3E-13 73.0 5.6 45 41-86 94-138 (139)
35 3cvb_A Plastocyanin; cupredoxi 98.7 2.6E-08 8.8E-13 66.0 5.6 43 43-87 61-104 (105)
36 2j5w_A Ceruloplasmin, ferroxid 98.6 4.8E-08 1.6E-12 88.3 6.9 51 38-88 306-356 (1065)
37 1kbv_A ANIA, major outer membr 98.6 9.4E-08 3.2E-12 75.8 6.6 62 39-104 257-320 (327)
38 1oe1_A Dissimilatory copper-co 98.5 1.7E-07 5.9E-12 74.1 6.9 47 42-88 271-318 (336)
39 2zoo_A Probable nitrite reduct 98.4 9.9E-08 3.4E-12 77.9 3.3 50 44-93 99-151 (442)
40 2gim_A Plastocyanin; beta shee 98.4 1.9E-07 6.4E-12 62.1 3.7 43 43-87 62-105 (106)
41 1qhq_A Protein (auracyanin); e 98.3 6.1E-07 2.1E-11 62.8 5.5 48 40-87 92-139 (140)
42 3gdc_A Multicopper oxidase; be 98.3 4.9E-07 1.7E-11 70.5 4.9 50 44-93 107-159 (288)
43 1pcs_A Plastocyanin; electron 98.2 3.2E-06 1.1E-10 55.3 5.6 40 43-86 58-97 (98)
44 2zoo_A Probable nitrite reduct 98.1 3.8E-06 1.3E-10 68.5 6.0 50 39-88 247-297 (442)
45 1kbv_A ANIA, major outer membr 98.1 2.2E-06 7.6E-11 67.9 4.3 49 46-94 111-162 (327)
46 2plt_A Plastocyanin; electron 98.1 5E-06 1.7E-10 54.3 5.3 40 43-86 58-97 (98)
47 1iby_A Nitrosocyanin; RED copp 98.1 7.2E-06 2.5E-10 55.1 6.1 42 45-87 70-111 (112)
48 1bxv_A Plastocyanin; copper pr 98.1 6.4E-06 2.2E-10 52.9 5.5 40 43-86 51-90 (91)
49 1mzy_A Copper-containing nitri 98.0 7.1E-06 2.4E-10 64.8 5.2 43 47-89 106-153 (333)
50 1b3i_A PETE protein, protein ( 98.0 5.9E-06 2E-10 54.0 3.8 40 43-86 57-96 (97)
51 2dv6_A Nitrite reductase; elec 98.0 5.2E-06 1.8E-10 67.6 4.3 50 44-93 234-286 (447)
52 1oe1_A Dissimilatory copper-co 97.9 1.4E-05 4.8E-10 63.0 5.2 43 47-89 107-153 (336)
53 1byp_A Protein (plastocyanin); 97.9 1.5E-05 5E-10 52.2 4.2 40 43-86 59-98 (99)
54 1kdj_A Plastocyanin; electron 97.9 1.1E-05 3.6E-10 53.2 3.5 39 44-86 63-101 (102)
55 2bw4_A Copper-containing nitri 97.7 3.9E-05 1.3E-09 60.5 4.9 43 47-89 113-159 (340)
56 2cal_A Rusticyanin; iron respi 97.7 4.9E-05 1.7E-09 54.6 4.7 39 47-86 113-153 (154)
57 1plc_A Plastocyanin; electron 97.6 4.9E-05 1.7E-09 49.7 4.0 39 44-86 60-98 (99)
58 4hci_A Cupredoxin 1; structura 97.6 0.00011 3.8E-09 48.4 5.5 41 45-87 60-100 (100)
59 3kw8_A Laccase, putative coppe 97.4 0.00018 6.3E-09 55.5 5.2 45 46-90 79-142 (276)
60 3g5w_A Multicopper oxidase typ 97.4 0.0002 6.9E-09 56.5 5.2 44 46-89 80-126 (318)
61 1aoz_A Ascorbate oxidase; oxid 97.3 0.00052 1.8E-08 57.7 6.7 43 47-89 82-124 (552)
62 2zwn_A Two-domain type laccase 97.2 0.00058 2E-08 54.1 5.9 45 45-89 80-127 (339)
63 2q9o_A Laccase-1; multicopper 97.1 0.00066 2.2E-08 57.4 6.1 43 47-89 115-158 (559)
64 1iuz_A Plastocyanin; electron 97.0 0.0013 4.5E-08 42.9 5.7 38 45-86 60-97 (98)
65 1fwx_A Nitrous oxide reductase 97.0 0.0011 3.6E-08 57.2 6.3 41 46-88 549-592 (595)
66 3t9w_A Small laccase, multi-co 97.0 0.00087 3E-08 52.4 5.1 43 47-89 102-163 (299)
67 3ef4_A Pseudoazurin, blue copp 97.0 0.00067 2.3E-08 47.3 4.0 40 46-89 57-96 (124)
68 3tas_A Small laccase, multi-co 97.0 0.0011 3.6E-08 52.1 5.4 44 46-89 85-147 (313)
69 1hfu_A Laccase 1; oxidoreducta 96.9 0.0011 3.7E-08 55.3 5.5 43 47-89 86-129 (503)
70 3pxl_A Laccase; 4-copper prote 96.9 0.0016 5.4E-08 54.6 6.4 43 47-89 86-129 (499)
71 3t6v_A Laccase; beta barrel, o 96.9 0.0016 5.5E-08 54.4 6.4 43 47-89 87-130 (495)
72 1v10_A Laccase; multicopper bl 96.9 0.0013 4.4E-08 55.1 5.8 43 47-89 107-150 (521)
73 3erx_A Pseudoazurin; copper pr 96.9 0.0012 4.1E-08 45.8 4.5 39 46-88 56-94 (123)
74 2ov0_A Amicyanin; beta-sandwic 96.8 0.0016 5.6E-08 43.1 4.7 34 47-86 71-104 (105)
75 2uxt_A Protein SUFI, SUFI; oxi 96.8 0.0008 2.7E-08 55.4 3.8 44 46-89 91-139 (451)
76 3cg8_A Laccase; oxidoreductase 96.8 0.0016 5.6E-08 51.8 5.2 44 46-89 120-182 (343)
77 3sqr_A Laccase; multicopper ox 96.8 0.0026 8.8E-08 54.4 6.7 43 47-89 146-188 (580)
78 3tu6_A Pseudoazurin (blue copp 96.8 0.0011 3.8E-08 46.3 3.6 39 46-88 58-96 (127)
79 1zpu_A Iron transport multicop 96.7 0.0024 8.1E-08 53.7 6.2 43 47-89 82-125 (534)
80 3aw5_A Multicopper oxidase; be 96.7 0.0019 6.7E-08 53.1 5.2 44 46-89 79-127 (448)
81 1sdd_A Coagulation factor V; c 96.6 0.0026 9E-08 49.6 5.5 45 45-89 111-167 (306)
82 2xu9_A Laccase; oxidoreductase 96.3 0.0037 1.3E-07 51.0 4.5 43 47-89 88-136 (439)
83 3od3_A Blue copper oxidase CUE 96.1 0.0043 1.5E-07 52.0 4.2 44 46-89 89-137 (488)
84 3zx1_A Oxidoreductase, putativ 96.1 0.0066 2.3E-07 50.7 5.1 44 46-89 123-172 (481)
85 1cuo_A Protein (azurin ISO-2); 96.1 0.01 3.5E-07 41.4 5.3 44 43-87 82-128 (129)
86 3ay2_A Lipid modified azurin p 96.1 0.0082 2.8E-07 43.9 5.0 45 42-87 120-166 (167)
87 1pmy_A Pseudoazurin; electron 96.1 0.0058 2E-07 42.1 3.9 39 46-88 56-94 (123)
88 1paz_A Pseudoazurin precursor; 96.0 0.0066 2.3E-07 41.9 4.0 38 47-88 57-94 (123)
89 2r7e_B Coagulation factor VIII 95.9 0.0048 1.6E-07 54.3 3.6 45 46-90 243-299 (770)
90 1id2_A Amicyanin; beta barrel, 95.8 0.013 4.4E-07 38.9 4.7 37 44-86 69-105 (106)
91 2g23_A PHS, phenoxazinone synt 95.5 0.015 5E-07 50.0 5.0 43 47-89 148-195 (612)
92 1sdd_B Coagulation factor V; c 95.4 0.013 4.5E-07 50.0 4.3 46 45-90 120-177 (647)
93 2iaa_C Azurin; quinoprotein, t 95.3 0.032 1.1E-06 38.7 5.4 45 42-87 80-127 (128)
94 3c75_A Amicyanin; copper prote 95.3 0.025 8.6E-07 39.1 4.7 37 44-86 95-131 (132)
95 2ccw_A Azurin II, AZN-2; elect 95.2 0.039 1.3E-06 38.3 5.5 44 43-87 82-128 (129)
96 3abg_A Bilirubin oxidase; clea 95.0 0.015 5.2E-07 48.9 3.4 43 47-89 111-158 (534)
97 1nwp_A Azurin; electron transp 94.6 0.06 2E-06 37.4 5.2 44 42-86 81-127 (128)
98 3fsa_A Azurin; copper, cupredo 94.6 0.062 2.1E-06 37.5 5.2 43 40-86 79-124 (125)
99 2wsd_A Spore coat protein A; o 94.2 0.025 8.7E-07 47.1 3.0 38 52-89 135-177 (513)
100 2ux6_A Pseudoazurin; type-1 co 93.6 0.085 2.9E-06 36.0 4.3 36 47-88 57-92 (122)
101 2cua_A Protein (CUA); CUA cent 93.2 0.19 6.5E-06 35.0 5.6 40 46-87 92-134 (135)
102 3gyr_A PHS, phenoxazinone synt 92.9 0.11 3.7E-06 43.4 4.7 43 47-89 148-195 (612)
103 3sbq_A Nitrous-oxide reductase 92.7 0.24 8.1E-06 43.0 6.5 42 46-87 594-636 (638)
104 3s8f_B Cytochrome C oxidase su 90.8 0.54 1.9E-05 34.1 5.8 42 46-87 125-167 (168)
105 1x9u_A Umecyanin; cupredoxin, 62.7 10 0.00035 25.5 4.2 32 57-88 73-105 (116)
106 1jer_A Cucumber stellacyanin; 53.2 24 0.0008 24.5 4.8 32 57-88 76-108 (138)
107 1ws8_A Mavicyanin; oxidized fo 49.3 22 0.00075 23.5 4.0 31 57-87 73-103 (109)
108 3hb3_B Cytochrome C oxidase su 41.2 31 0.0011 27.0 4.3 42 47-88 222-264 (298)
109 1f56_A Plantacyanin; cupredoxi 37.2 52 0.0018 20.9 4.3 33 51-86 58-90 (91)
110 1cyx_A CYOA; electron transpor 36.4 53 0.0018 24.3 4.7 41 47-87 74-115 (205)
111 2cbp_A Cucumber basic protein; 32.9 61 0.0021 20.7 4.1 33 51-86 63-95 (96)
112 2gsm_B Cytochrome C oxidase su 22.8 1.1E+02 0.0038 23.1 4.5 41 47-87 204-245 (262)
113 1v54_B Cytochrome C oxidase po 22.5 1E+02 0.0035 22.8 4.2 41 47-87 173-214 (227)
114 2z0b_A GDE5, KIAA1434, putativ 20.5 86 0.0029 21.0 3.1 23 38-60 53-75 (131)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.90 E-value=6.5e-25 Score=185.64 Aligned_cols=90 Identities=29% Similarity=0.545 Sum_probs=78.2
Q ss_pred CEEEeecCCCCCCCcccccHHHHHHhccCCCccccCCCCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCc
Q psy9698 1 MYILKQGKIPPNVDKGLFLSQLIRQLDQEGPRLRTTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGM 80 (123)
Q Consensus 1 f~vlg~g~~~~~~~~~~~~~~e~~~~~~~g~~~~~n~~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM 80 (123)
|+||++|. +.|. . .+ ...+|+.+|++||||.|+|++|++|||++||||.|+||||+++|++.||
T Consensus 454 F~Vl~~g~-G~~~-----~------~~----~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM 517 (552)
T 1aoz_A 454 FWVLGYGD-GKFS-----A------EE----ESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGM 517 (552)
T ss_dssp EEEEEEEE-SSCC-----G------GG----GGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTC
T ss_pred eEEEeccc-CccC-----c------cc----ccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCC
Confidence 79999986 3443 1 11 2258999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeccCccCCCCCCCCCCccCCC
Q psy9698 81 TLVFQVGDRKQFVRAPPHFPQCDNFQP 107 (123)
Q Consensus 81 ~~~~~V~~~~~~~~~p~~~~~C~~~~~ 107 (123)
+++|.|+ +++++++|++++.|+.+++
T Consensus 518 ~~~~~~~-~~~~~~~P~~~~~C~~~~~ 543 (552)
T 1aoz_A 518 GVVFAEG-VEKVGRIPTKALACGGTAK 543 (552)
T ss_dssp EEEEEEC-GGGCCCCCHHHHSSHHHHH
T ss_pred eEEEEeC-chhhccCCcchhhhhccCc
Confidence 9999997 4588899999999999863
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.84 E-value=3.8e-22 Score=170.86 Aligned_cols=90 Identities=21% Similarity=0.482 Sum_probs=73.7
Q ss_pred CEEEeecCCCCCCCcccccHHHHHHhccCCCccccCCCCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCc
Q psy9698 1 MYILKQGKIPPNVDKGLFLSQLIRQLDQEGPRLRTTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGM 80 (123)
Q Consensus 1 f~vlg~g~~~~~~~~~~~~~~e~~~~~~~g~~~~~n~~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM 80 (123)
|||||+|. ++|.. +. + ...+|+.||++|||+.|+|++|++|||++||||.|+||||+.+|++.||
T Consensus 472 F~vv~~g~-G~f~~----------~~---~-~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm 536 (580)
T 3sqr_A 472 FFIVAQET-DVFNS----------DE---S-PAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGL 536 (580)
T ss_dssp EEEEEEES-SCCCT----------TT---S-GGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTC
T ss_pred EEEEecCC-CccCc----------cc---c-ccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCC
Confidence 89999987 45441 01 1 2358999999999999999999999999999999999999999999999
Q ss_pred eEEEEeeccCccCC---CCCCC-CCCccCC
Q psy9698 81 TLVFQVGDRKQFVR---APPHF-PQCDNFQ 106 (123)
Q Consensus 81 ~~~~~V~~~~~~~~---~p~~~-~~C~~~~ 106 (123)
+++|.++ ++++++ +|+.+ ..|..|+
T Consensus 537 ~~~~~e~-~~~i~~~~~~~~~~~~~C~~~~ 565 (580)
T 3sqr_A 537 AMQFVES-QSSIAVKMTDTAIFEDTCANWN 565 (580)
T ss_dssp EEEEEES-GGGCCCCHHHHHHHHHHHHHHH
T ss_pred cEEEEEC-HHHHhhccCCcHHHHHhhHHHh
Confidence 9999986 444543 44544 5899885
No 3
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.83 E-value=9e-22 Score=167.01 Aligned_cols=73 Identities=26% Similarity=0.545 Sum_probs=62.7
Q ss_pred ccCCCCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeecc--CccCCC--CC-CCCCCccCC
Q psy9698 34 RTTQPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDR--KQFVRA--PP-HFPQCDNFQ 106 (123)
Q Consensus 34 ~~n~~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~--~~~~~~--p~-~~~~C~~~~ 106 (123)
.+|+.+|+|||||.|++++|++|||++||||.|+||||+++|++.||+++|.|... .++.++ |. .++.|+.|+
T Consensus 467 ~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~~~p~~~~~~C~~~~ 544 (559)
T 2q9o_A 467 RLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPADLRQRISQEDEDDFNRVCDEWR 544 (559)
T ss_dssp GCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred ccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcchhhhccccCCchhhhhhccccc
Confidence 47899999999999999999999999999999999999999999999999998631 223333 54 457999996
No 4
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.82 E-value=2.4e-21 Score=163.08 Aligned_cols=73 Identities=23% Similarity=0.460 Sum_probs=63.4
Q ss_pred cCCCCCceeeeEEe-CCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeeccC--ccCCCCC-CCCCCccCCC
Q psy9698 35 TTQPRPIVKDTVGN-LPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDRK--QFVRAPP-HFPQCDNFQP 107 (123)
Q Consensus 35 ~n~~~p~~rDTv~v-~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~--~~~~~p~-~~~~C~~~~~ 107 (123)
+|+.+|+|||||.| +|++|++|||++||||.|+||||+++|++.||+++|.|...+ ++.++|. ..+.|+.|++
T Consensus 437 ~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~ 513 (521)
T 1v10_A 437 YNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNIPIANAISPAWDDLCPKYNA 513 (521)
T ss_dssp CCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGHHHHSCCCHHHHTHHHHHTT
T ss_pred cccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcchhhccCCChHHhhhchhhhc
Confidence 67899999999999 899999999999999999999999999999999999997421 2334564 4689999974
No 5
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.81 E-value=3.7e-21 Score=161.26 Aligned_cols=73 Identities=25% Similarity=0.531 Sum_probs=63.2
Q ss_pred cCCCCCceeeeEEe-CCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeecc--CccCCCCC-CCCCCccCCC
Q psy9698 35 TTQPRPIVKDTVGN-LPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDR--KQFVRAPP-HFPQCDNFQP 107 (123)
Q Consensus 35 ~n~~~p~~rDTv~v-~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~--~~~~~~p~-~~~~C~~~~~ 107 (123)
+|+.+|.|||||.| +|++|++|||++||||.|+||||+++|++.||++.|.|... ..+.++|. ..+.|+.|+.
T Consensus 416 ~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~~~~~~~~p~~~~~~C~~~~~ 492 (503)
T 1hfu_A 416 YNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMANTVDANNPPVEWAQLCEIYDD 492 (503)
T ss_dssp CCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHHHHHHCCCCHHHHHHHHHHHT
T ss_pred cccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchhhhhccCCChHHhhhccchhh
Confidence 57889999999999 89999999999999999999999999999999999999632 13344564 4679999964
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.80 E-value=9.3e-21 Score=160.15 Aligned_cols=73 Identities=27% Similarity=0.535 Sum_probs=61.5
Q ss_pred CCCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeeccCcc-----CCCCCC-CCCCccCCCCCc
Q psy9698 37 QPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDRKQF-----VRAPPH-FPQCDNFQPAVT 110 (123)
Q Consensus 37 ~~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~-----~~~p~~-~~~C~~~~~~~~ 110 (123)
..+|+|||||.|+|++|++|||++||||.|+||||+++|++.||+++|.|.. +.+ .++|.+ .+.|..|..+..
T Consensus 430 ~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~-~~~~~~~~~~~p~~~~~~C~~~~~~~~ 508 (534)
T 1zpu_A 430 PEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP-FGIQDAHSQQLSENHLEVCQSCSVATE 508 (534)
T ss_dssp CSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH-HHHHHCGGGSCCHHHHHHHHHTTCCCS
T ss_pred cCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECc-cccccccccCCChhHhhhhhccCCCCC
Confidence 5689999999999999999999999999999999999999999999999863 222 234554 469998875443
No 7
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.79 E-value=1.9e-20 Score=157.57 Aligned_cols=72 Identities=25% Similarity=0.582 Sum_probs=62.4
Q ss_pred ccCCCCCceeeeEEeCC---CCEEEEEEEecCCceEEEeecCccccccCceEEEEeeccCccC---CCCCCC-CCCccCC
Q psy9698 34 RTTQPRPIVKDTVGNLP---SGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDRKQFV---RAPPHF-PQCDNFQ 106 (123)
Q Consensus 34 ~~n~~~p~~rDTv~v~p---g~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~---~~p~~~-~~C~~~~ 106 (123)
.+|+.+|++|||+.|++ ++|++|||++||||.|+||||+.+|++.||+++|.++ ++.++ ++|..+ ..|..|+
T Consensus 414 ~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~-~~~~~~~~~~p~~~~~~C~~~~ 492 (499)
T 3pxl_A 414 VYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED-TPDVKAVNPVPQAWSDLCPTYD 492 (499)
T ss_dssp CCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES-GGGHHHHSCCCHHHHTHHHHHH
T ss_pred ccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC-hhHhccccCCCHHHHHhhhHhh
Confidence 47899999999999997 9999999999999999999999999999999999876 44443 356654 6899885
No 8
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.78 E-value=2e-20 Score=157.21 Aligned_cols=72 Identities=26% Similarity=0.573 Sum_probs=61.7
Q ss_pred ccCCCCCceeeeEEeCC-CCEEEEEEEecCCceEEEeecCccccccCceEEEEeeccCccC---CCCCCC-CCCccCC
Q psy9698 34 RTTQPRPIVKDTVGNLP-SGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDRKQFV---RAPPHF-PQCDNFQ 106 (123)
Q Consensus 34 ~~n~~~p~~rDTv~v~p-g~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~---~~p~~~-~~C~~~~ 106 (123)
.+|+.+|++|||+.|++ |+|++|||++||||.|+||||+.+|++.||+++|.++ +++++ ++|..+ ..|..|+
T Consensus 416 ~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~-~~~~~~~~~~p~~~~~~C~~~~ 492 (495)
T 3t6v_A 416 TSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAED-IPNTASANPVPEAWSNLCPSYD 492 (495)
T ss_dssp CCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEET-HHHHHHHCCCCHHHHHHHHHHH
T ss_pred CcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEC-hhHhccccCCCHHHHHHhhHhh
Confidence 47889999999999997 9999999999999999999999999999999999876 44343 356654 5888774
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.71 E-value=5.1e-18 Score=139.83 Aligned_cols=51 Identities=35% Similarity=0.485 Sum_probs=48.7
Q ss_pred CCCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 37 QPRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 37 ~~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
..+|.|||||.|+|+++++|||++||||.|+||||+++|++.|||+.|+|+
T Consensus 389 ~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 389 FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 357999999999999999999999999999999999999999999999985
No 10
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.71 E-value=1.5e-17 Score=140.71 Aligned_cols=72 Identities=25% Similarity=0.300 Sum_probs=56.5
Q ss_pred cCCCCCceeeeEEeCCCCEEEEEEE-ecCCceEEEeecCccccccCceEEEEeeccCc--cCCCCCCCCCCccCCC
Q psy9698 35 TTQPRPIVKDTVGNLPSGYTVVRVH-FNNPGMWYFHCHFVMHTDTGMTLVFQVGDRKQ--FVRAPPHFPQCDNFQP 107 (123)
Q Consensus 35 ~n~~~p~~rDTv~v~pg~~~~irf~-adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~~--~~~~p~~~~~C~~~~~ 107 (123)
.|+++ .|||||.|+|+++++|||+ ++|||.|+||||+++|++.|||+.|.|...++ .++..-.-|.|..|+.
T Consensus 422 ~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~~~p~~~~w~~ 496 (534)
T 3abg_A 422 MPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLPDYGYNATVFVDPMEELWQA 496 (534)
T ss_dssp CSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSCCSSTTTTSCSSSSSCCCSS
T ss_pred Ccccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEeccccCCCCcccCCCCCccccc
Confidence 34556 8999999999999999999 99999999999999999999999999975432 2221111146666663
No 11
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.70 E-value=6.9e-18 Score=142.27 Aligned_cols=56 Identities=23% Similarity=0.206 Sum_probs=51.2
Q ss_pred cCCCCCceeeeEEeCCCCEEEEEEE-ecCCceEEEeecCccccccCceEEEEeeccC
Q psy9698 35 TTQPRPIVKDTVGNLPSGYTVVRVH-FNNPGMWYFHCHFVMHTDTGMTLVFQVGDRK 90 (123)
Q Consensus 35 ~n~~~p~~rDTv~v~pg~~~~irf~-adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~ 90 (123)
.+..++.|||||.|+++++++|||+ +||||.|+|||||++|++.|||+.|.|.+++
T Consensus 537 ~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~ 593 (612)
T 3gyr_A 537 LAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPE 593 (612)
T ss_dssp CCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHH
T ss_pred cccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCc
Confidence 3456788999999999999999998 7999999999999999999999999997544
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.60 E-value=7.3e-16 Score=129.37 Aligned_cols=49 Identities=24% Similarity=0.380 Sum_probs=46.2
Q ss_pred CceeeeEEeCCCCEEEEEEEe-cCCceEEEeecCccccccCceEEEEeec
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHF-NNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~a-dnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
+.|||||.|+|+++++|+|++ +|||.|+||||+++|++.|||+.|.|.+
T Consensus 461 ~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 461 KGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp SSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred cCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 459999999999999999998 8999999999999999999999999964
No 13
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.56 E-value=9.5e-16 Score=127.03 Aligned_cols=48 Identities=29% Similarity=0.367 Sum_probs=43.5
Q ss_pred CCCceeeeEEeCCCCEEEEE--EE---ecCCceEEEeecCccccccCceEEEEee
Q psy9698 38 PRPIVKDTVGNLPSGYTVVR--VH---FNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 38 ~~p~~rDTv~v~pg~~~~ir--f~---adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
.+|.|||||.|+|+++++|+ |. +||| |+||||+++|++.|||+.|.|.
T Consensus 396 ~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 396 TDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp GGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred cccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 34579999999999999776 88 8999 9999999999999999999883
No 14
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.55 E-value=3.3e-15 Score=125.33 Aligned_cols=49 Identities=27% Similarity=0.465 Sum_probs=47.4
Q ss_pred CCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 39 RPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 39 ~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
.+.|||||.|+|+++++|+|+++|||.|+||||+++|++.||++.|.|.
T Consensus 432 ~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 432 FRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp SCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred cCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 4789999999999999999999999999999999999999999999995
No 15
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.54 E-value=3.2e-15 Score=128.66 Aligned_cols=61 Identities=23% Similarity=0.262 Sum_probs=53.1
Q ss_pred CCCCCceeeeEEeCCCCEEEEEEEec-CCceEEEeecCccccccCceEEEEeeccCccCCCCC
Q psy9698 36 TQPRPIVKDTVGNLPSGYTVVRVHFN-NPGMWYFHCHFVMHTDTGMTLVFQVGDRKQFVRAPP 97 (123)
Q Consensus 36 n~~~p~~rDTv~v~pg~~~~irf~ad-npG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~p~ 97 (123)
+..++.|||||.|+|+++++|+|+++ |||.|+||||+++|++.|||+.|.|. ++++.++|.
T Consensus 538 ~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~-p~~~~~~~~ 599 (612)
T 2g23_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVM-PPEALKFDH 599 (612)
T ss_dssp CTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEE-CHHHHTTC-
T ss_pred CcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEEC-chhhccCCC
Confidence 44556799999999999999999999 99999999999999999999999997 345555554
No 16
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.53 E-value=3.6e-15 Score=123.53 Aligned_cols=52 Identities=25% Similarity=0.261 Sum_probs=48.1
Q ss_pred cCCCCCceeeeEEeCCCCEEEEEEEecCCce----EEEeecCccccccCceEEEEeec
Q psy9698 35 TTQPRPIVKDTVGNLPSGYTVVRVHFNNPGM----WYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 35 ~n~~~p~~rDTv~v~pg~~~~irf~adnpG~----Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
+|+.+|.|||||.| +++++|+|+++|||. |+||||+++|++.|||+.|.|.+
T Consensus 386 ~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~ 441 (451)
T 2uxt_A 386 PFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNP 441 (451)
T ss_dssp CCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEEC
T ss_pred CCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEcc
Confidence 35567999999999 999999999999988 99999999999999999999974
No 17
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.43 E-value=3.4e-13 Score=106.90 Aligned_cols=54 Identities=28% Similarity=0.407 Sum_probs=48.2
Q ss_pred CCCCceeeeEEeCCCCEEEEEEEe---cCCceEEEeecCccccccCceEEEEeeccC
Q psy9698 37 QPRPIVKDTVGNLPSGYTVVRVHF---NNPGMWYFHCHFVMHTDTGMTLVFQVGDRK 90 (123)
Q Consensus 37 ~~~p~~rDTv~v~pg~~~~irf~a---dnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~ 90 (123)
...|.++||+.|.|++..++++.+ +|||.|+||||+++|++.||++.|.|.+.+
T Consensus 217 ~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d 273 (313)
T 3tas_A 217 DDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 273 (313)
T ss_dssp TCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred CCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCC
Confidence 346789999999999999888875 589999999999999999999999998654
No 18
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.40 E-value=5.3e-13 Score=107.25 Aligned_cols=64 Identities=25% Similarity=0.362 Sum_probs=51.0
Q ss_pred CCceeeeEEeCCCCEEEEEEEe---cCCceEEEeecCccccccCceEEEEeeccCccCCCCCCCCCCcc
Q psy9698 39 RPIVKDTVGNLPSGYTVVRVHF---NNPGMWYFHCHFVMHTDTGMTLVFQVGDRKQFVRAPPHFPQCDN 104 (123)
Q Consensus 39 ~p~~rDTv~v~pg~~~~irf~a---dnpG~Wl~HCHi~~H~~~GM~~~~~V~~~~~~~~~p~~~~~C~~ 104 (123)
.+.++||+.|.||++++++|.+ +|||.|+||||+.+|++.||++.|.|.+.+ ...|.+.+.|-.
T Consensus 254 ~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~--~~~P~y~~~~~~ 320 (343)
T 3cg8_A 254 PSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD--GTIPGYEPHEHG 320 (343)
T ss_dssp CCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT--SCCSCC------
T ss_pred cccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC--CCCCCCCCCCcC
Confidence 3578999999999999999995 899999999999999999999999997533 345666665544
No 19
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.39 E-value=2.5e-13 Score=106.46 Aligned_cols=50 Identities=22% Similarity=0.423 Sum_probs=47.7
Q ss_pred CCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 38 PRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 38 ~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
..|.++||+.|+||++.+++|.+++||.|+||||+..|++.||++.|.|.
T Consensus 238 ~~~~~~Dtv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 238 TPSEYTDTISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp SCSEEESEEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred CCCceeeEEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 45689999999999999999999999999999999999999999999985
No 20
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.38 E-value=6.7e-13 Score=103.42 Aligned_cols=50 Identities=28% Similarity=0.468 Sum_probs=47.2
Q ss_pred CceeeeEEeCCCCEEEEEEEec---CCceEEEeecCccccccCceEEEEeecc
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHFN---NPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~ad---npG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
+.++||+.|.||++.+++|.++ |||.|+||||+..|++.||++.|.|.+.
T Consensus 214 ~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~ 266 (276)
T 3kw8_A 214 SRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKP 266 (276)
T ss_dssp CCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred ccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCC
Confidence 5799999999999999999997 8999999999999999999999999754
No 21
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.35 E-value=1.3e-12 Score=103.20 Aligned_cols=53 Identities=30% Similarity=0.448 Sum_probs=45.8
Q ss_pred CCCCceeeeEEeCCCCEEEEEEE---ecCCceEEEeecCccccccCceEEEEeecc
Q psy9698 37 QPRPIVKDTVGNLPSGYTVVRVH---FNNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 37 ~~~p~~rDTv~v~pg~~~~irf~---adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
...+.++||+.|.||+...+++. ++|||.|+||||+.+|++.||++.|.|.+.
T Consensus 233 ~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~ 288 (299)
T 3t9w_A 233 YDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNA 288 (299)
T ss_dssp TCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECT
T ss_pred cCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECC
Confidence 34567899999999988776665 578999999999999999999999999754
No 22
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=99.33 E-value=8e-13 Score=119.30 Aligned_cols=49 Identities=27% Similarity=0.616 Sum_probs=47.7
Q ss_pred CceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
|.++||+.|+||++++|+|+++|||.|+||||+++|++.||++.|.|.+
T Consensus 1010 p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~ 1058 (1065)
T 2j5w_A 1010 VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQ 1058 (1065)
T ss_dssp CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEEC
T ss_pred CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEec
Confidence 8899999999999999999999999999999999999999999999974
No 23
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.33 E-value=6.5e-13 Score=111.70 Aligned_cols=46 Identities=41% Similarity=0.550 Sum_probs=42.4
Q ss_pred CceeeeEEeCCCCEEEEEEEec----CCceEEEeecCccccccCceEEEEe
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHFN----NPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~ad----npG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
+.|||||.|+ |++++|+|+++ +||.|+||||++.|++.|||+.|.|
T Consensus 439 ~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~V 488 (488)
T 3od3_A 439 AGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFTV 488 (488)
T ss_dssp SSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEEC
T ss_pred CCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEEC
Confidence 4699999999 99999999974 5789999999999999999999986
No 24
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.30 E-value=2.2e-12 Score=102.58 Aligned_cols=51 Identities=31% Similarity=0.507 Sum_probs=47.2
Q ss_pred CCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccc------cCceEEEEeec
Q psy9698 38 PRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTD------TGMTLVFQVGD 88 (123)
Q Consensus 38 ~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~------~GM~~~~~V~~ 88 (123)
.+|.++||+.|.||++++|+|.++|||.|+||||+++|++ .||++.+.|..
T Consensus 220 ~~p~~~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g 276 (318)
T 3g5w_A 220 DKPIKGDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEE 276 (318)
T ss_dssp EEEEEESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETT
T ss_pred CCCccccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECC
Confidence 3678999999999999999999999999999999999997 68999999864
No 25
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=99.25 E-value=9.5e-12 Score=101.72 Aligned_cols=50 Identities=22% Similarity=0.369 Sum_probs=46.6
Q ss_pred CCc-eeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 39 RPI-VKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 39 ~p~-~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
.|. ++||+.|+||++++|+|.++|||.|++|||+.+|.+.||+++|.|..
T Consensus 383 ~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~ 433 (447)
T 2dv6_A 383 PPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDG 433 (447)
T ss_dssp CCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECS
T ss_pred CCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeC
Confidence 344 69999999999999999999999999999999999999999999963
No 26
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.16 E-value=9.1e-11 Score=93.69 Aligned_cols=51 Identities=29% Similarity=0.357 Sum_probs=46.9
Q ss_pred CCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccc------cccCceEEEEeec
Q psy9698 38 PRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMH------TDTGMTLVFQVGD 88 (123)
Q Consensus 38 ~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H------~~~GM~~~~~V~~ 88 (123)
.+|.++||+.|+||++++|+|.+++||.|++|||+..| ...||++.+.+..
T Consensus 221 ~~p~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g 277 (339)
T 2zwn_A 221 DSPYYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDG 277 (339)
T ss_dssp EEEEEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETT
T ss_pred CCCcEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECC
Confidence 34789999999999999999999999999999999999 7789999998853
No 27
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.10 E-value=6.1e-11 Score=101.61 Aligned_cols=51 Identities=18% Similarity=0.330 Sum_probs=48.2
Q ss_pred CCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 38 PRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 38 ~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
.+|.++||+.|.||++++|+|.+++||.|+||||+.+|++.||++.|.|.+
T Consensus 277 ~d~~~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 277 TQQHQLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp SSCEEESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred CCCcccceEEECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 367899999999999999999999999999999999999999999999963
No 28
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.04 E-value=1.1e-11 Score=97.82 Aligned_cols=50 Identities=12% Similarity=0.205 Sum_probs=36.5
Q ss_pred CCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 39 RPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 39 ~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
++.++||+.|.||+.++++|.+++||.|+||||+.+|++.||++.|.|.+
T Consensus 251 dG~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~ 300 (306)
T 1sdd_A 251 NHHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKN 300 (306)
T ss_dssp TTEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC----
T ss_pred CCEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEec
Confidence 56789999999999999999999999999999999999999999999963
No 29
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.04 E-value=1.1e-11 Score=108.51 Aligned_cols=49 Identities=29% Similarity=0.556 Sum_probs=47.2
Q ss_pred CceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
|.++||+.|.||+.++|.|.+++||.|+||||+++|++.||++.|.|.+
T Consensus 663 ~~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~~ 711 (742)
T 2r7e_A 663 MVYEDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVSS 711 (742)
T ss_dssp SSSBCSSCCCCCSSEECCEECCCCCCSCCEECCCSTTHHHHSCCCCCCC
T ss_pred ccceeEEEECCCcEEEEEEEcCCCeEEEEEeCCchHHhCCCeEEEEEEe
Confidence 7899999999999999999999999999999999999999999999963
No 30
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=98.98 E-value=5.4e-11 Score=104.66 Aligned_cols=49 Identities=20% Similarity=0.361 Sum_probs=46.6
Q ss_pred CCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 39 RPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 39 ~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
++.++||+.|.||++++|+|.+++||.|+||||+.+|++.||++.|.|.
T Consensus 407 dg~~~Dtv~l~Pg~~~~v~~~ad~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 407 EEYKMALYNLYPGVFETVEMLPSKAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp SCCEESEEECCTTCCCEEEECCSSCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCceeeEEEECCCeEEEEEEEeCCCCceEEEeccccccccccccccccc
Confidence 4669999999999999999999999999999999999999999999983
No 31
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=98.94 E-value=1.8e-10 Score=100.94 Aligned_cols=49 Identities=16% Similarity=0.337 Sum_probs=46.1
Q ss_pred CceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
..++||+.|.|+++++++|.+++||.|+||||+..|++.||++.|.|..
T Consensus 281 g~~~Dtv~v~Pg~~~~v~~~~~~pG~w~~hCH~~~H~~~GM~~~~~V~~ 329 (742)
T 2r7e_A 281 NHRQASLEISPITFLTAQTLLMDLGQFLLFCHISSHQHDGMEAYVKVDS 329 (742)
T ss_dssp TEECCSCCCCTTCCCEEEECCCSCSEECCCCCSSSSSTTSCCBCEEECC
T ss_pred eEecceEEeCCCcEEEEEEEeCCCeeEEEEeCChhHHhCCCeEEEEEec
Confidence 3468999999999999999999999999999999999999999999964
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=98.93 E-value=2.1e-09 Score=85.31 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=44.2
Q ss_pred eeeeEEeCCCCEEEEEEEecCCceEEEeecCc-cccccCceEEEEeec
Q psy9698 42 VKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFV-MHTDTGMTLVFQVGD 88 (123)
Q Consensus 42 ~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~-~H~~~GM~~~~~V~~ 88 (123)
++||+.|.||+.+.|.|.+++||.|+||||.. .|++.||++.|.|..
T Consensus 277 ~~dtv~l~pGer~~v~v~~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~ 324 (340)
T 2bw4_A 277 DQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTG 324 (340)
T ss_dssp EESCCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred cceEEEeCCCceEEEEEECCCCeeeEEEcCchHHHHhCCCEEEEEECC
Confidence 47999999999999999999999999999999 599999999999964
No 33
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=98.89 E-value=1.8e-09 Score=85.63 Aligned_cols=47 Identities=17% Similarity=0.130 Sum_probs=44.6
Q ss_pred eeeeEEeCCCCEEEEEEEecCCceEEEeecCcccc-ccCceEEEEeec
Q psy9698 42 VKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHT-DTGMTLVFQVGD 88 (123)
Q Consensus 42 ~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~-~~GM~~~~~V~~ 88 (123)
++||+.|.||+.+++.|.+++||.|++|||...|. +.||++.|+|..
T Consensus 271 ~~dtv~l~pGer~~v~v~a~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~ 318 (333)
T 1mzy_A 271 DLETWFIRGGTAGAALYKFLQPGVYAYVNHNLIEAVHKGATAHVLVEG 318 (333)
T ss_dssp EESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTCCEEEEEEES
T ss_pred CcceEEECCCceEEEEEEcCCCEEEEEecChhhhHhhCCCEEEEEEcC
Confidence 58999999999999999999999999999999996 999999999964
No 34
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.79 E-value=6.8e-09 Score=72.96 Aligned_cols=45 Identities=16% Similarity=0.121 Sum_probs=42.7
Q ss_pred ceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 41 IVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 41 ~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.++|+..|.||+..++.|.+++||.|.||||+..|.. ||.+.|.|
T Consensus 94 ~~~~t~~l~pGet~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V 138 (139)
T 2aan_A 94 IIAESPLANGNETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVV 138 (139)
T ss_dssp EEEECCCBCTTCEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEE
T ss_pred ccccccccCCCCEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEE
Confidence 5689999999999999999999999999999999999 99999987
No 35
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=98.69 E-value=2.6e-08 Score=66.03 Aligned_cols=43 Identities=16% Similarity=0.206 Sum_probs=39.6
Q ss_pred eeeEEeCCCCEEEEEEEe-cCCceEEEeecCccccccCceEEEEee
Q psy9698 43 KDTVGNLPSGYTVVRVHF-NNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~a-dnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
.++..+.||+..+++|.+ +.||.|.|||| .|...||.+.|.|.
T Consensus 61 ~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 104 (105)
T 3cvb_A 61 HSQLMFSPGESYEITFSSDFPAGTYTYYCA--PHRGAGMVGKITVE 104 (105)
T ss_dssp EEEEECSTTCEEEEEECTTSCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ccccccCCCCeEEEEEecCCCCeeEEEEeC--CchhcCCEEEEEEc
Confidence 478899999999999998 79999999999 79999999999985
No 36
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=98.62 E-value=4.8e-08 Score=88.30 Aligned_cols=51 Identities=25% Similarity=0.488 Sum_probs=48.5
Q ss_pred CCCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 38 PRPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 38 ~~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
.+|.++|++.|.||+++.|.+.+++||.|++|||+..|.+.||++.|.|..
T Consensus 306 v~p~~~dtv~I~pGer~dVlv~~~~pG~y~i~~h~~~h~~~Gm~~~~~V~~ 356 (1065)
T 2j5w_A 306 NKNYRIDTINLFPATLFDAYMVAQNPGEWMLSCQNLNHLKAGLQAFFQVQE 356 (1065)
T ss_dssp ETTEEESEEEECBTCEEEEEEECCSCEEEEEEECSHHHHHTTCEEEEEEEC
T ss_pred ECCeeecEEEECCCcEEEEEEEeCCCeeEEEEecCcchhhCCCEEEEEEec
Confidence 468899999999999999999999999999999999999999999999964
No 37
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=98.57 E-value=9.4e-08 Score=75.83 Aligned_cols=62 Identities=13% Similarity=0.176 Sum_probs=49.4
Q ss_pred CCceeeeEEeCCCCEEEEEEEecCCceEEEeecCcccc-ccCceEEEEeeccCccCCCCCCC-CCCcc
Q psy9698 39 RPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHT-DTGMTLVFQVGDRKQFVRAPPHF-PQCDN 104 (123)
Q Consensus 39 ~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~-~~GM~~~~~V~~~~~~~~~p~~~-~~C~~ 104 (123)
.|..+|++.|.||+.++|.|.+++||.|++|||...|. ..||.+++.|... +.|+-| ..|.+
T Consensus 257 ~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~----~~~~~~~~~~~~ 320 (327)
T 1kbv_A 257 INENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGA----ENPEIMTQKLSD 320 (327)
T ss_dssp EECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESC----CCTTTC------
T ss_pred CCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCC----CCchhccCcccc
Confidence 47899999999999999999999999999999999995 8899999999632 234444 35654
No 38
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.52 E-value=1.7e-07 Score=74.10 Aligned_cols=47 Identities=15% Similarity=0.161 Sum_probs=43.9
Q ss_pred eeeeEEeCCCCEEEEEEEecCCceEEEeecCcccc-ccCceEEEEeec
Q psy9698 42 VKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHT-DTGMTLVFQVGD 88 (123)
Q Consensus 42 ~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~-~~GM~~~~~V~~ 88 (123)
+.||+.|+||+.+.+.+.+++||.|++|||...|. ..||++.|.|..
T Consensus 271 ~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~ 318 (336)
T 1oe1_A 271 DLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEG 318 (336)
T ss_dssp EESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEES
T ss_pred cceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECC
Confidence 47999999999999999999999999999999885 999999999963
No 39
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=98.42 E-value=9.9e-08 Score=77.95 Aligned_cols=50 Identities=22% Similarity=0.432 Sum_probs=42.9
Q ss_pred eeEEeCCCCEEEEEEEecCCceEEEeec---CccccccCceEEEEeeccCccC
Q psy9698 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCH---FVMHTDTGMTLVFQVGDRKQFV 93 (123)
Q Consensus 44 DTv~v~pg~~~~irf~adnpG~Wl~HCH---i~~H~~~GM~~~~~V~~~~~~~ 93 (123)
++..|+||++.+++|.+++||.|.|||| +..|...||.+.|.|.+.+.++
T Consensus 99 ~~~~i~pg~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~~ 151 (442)
T 2zoo_A 99 ESSFTAPGHTSTFNFKALNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGLA 151 (442)
T ss_dssp GGCCBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCC
T ss_pred ccEEECCCCEEEEEEEcCCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCCC
Confidence 4567999999999999999999999996 5789999999999997544333
No 40
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.40 E-value=1.9e-07 Score=62.08 Aligned_cols=43 Identities=21% Similarity=0.263 Sum_probs=39.0
Q ss_pred eeeEEeCCCCEEEEEEEe-cCCceEEEeecCccccccCceEEEEee
Q psy9698 43 KDTVGNLPSGYTVVRVHF-NNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~a-dnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
.|++.+.||+...+.|.+ +.||.|.|||| .|...||.+.+.|.
T Consensus 62 ~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 62 HKQLLMSPGQSTSTTFPADAPAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp BCSCCCSTTCEEEEECCTTCCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ccceeeCCCCEEEEEEecCCCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 467889999999999888 79999999999 89999999999985
No 41
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.35 E-value=6.1e-07 Score=62.81 Aligned_cols=48 Identities=21% Similarity=0.204 Sum_probs=44.4
Q ss_pred CceeeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
..+.+|..|.||+...+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 92 ~~~~~t~~l~pG~~~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 92 NALAWTAMLNAGESGSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp TEEEECCCBCTTEEEEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred cccccceeeCCCceeEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 346789999999999999999999999999999999999999999885
No 42
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=98.32 E-value=4.9e-07 Score=70.50 Aligned_cols=50 Identities=18% Similarity=0.187 Sum_probs=43.3
Q ss_pred eeEEeCCCCEEEEEEEecCCceEEEeecCc---cccccCceEEEEeeccCccC
Q psy9698 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFV---MHTDTGMTLVFQVGDRKQFV 93 (123)
Q Consensus 44 DTv~v~pg~~~~irf~adnpG~Wl~HCHi~---~H~~~GM~~~~~V~~~~~~~ 93 (123)
+...|+||++.+.+|.+++||.|.||||.. .|...||.+.+.|.+.+..+
T Consensus 107 ~~~~i~PG~~~~y~f~~~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~ 159 (288)
T 3gdc_A 107 GAGSIAPGQSFTYEFDATPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP 159 (288)
T ss_dssp TTCSBCTTCEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC
T ss_pred cceeECCCCEEEEEEEcCCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC
Confidence 346789999999999999999999999997 68999999999997654333
No 43
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.17 E-value=3.2e-06 Score=55.32 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=35.9
Q ss_pred eeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 43 KDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.+++.+.||+..++.| +.||.|.|||+ .|...||.+.+.|
T Consensus 58 ~~~~~~~pG~~~~~tf--~~~G~y~~~C~--~H~~~gM~G~i~V 97 (98)
T 1pcs_A 58 HKGLLFAAGESFTSTF--TEPGTYTYYCE--PHRGAGMVGKVVV 97 (98)
T ss_dssp EEEEECSTTCEEEEEC--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccccccCCCCEEEEEc--CCCeEEEEEcC--CccccCCeEEEEE
Confidence 4688899999988877 79999999999 7999999999987
No 44
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=98.11 E-value=3.8e-06 Score=68.53 Aligned_cols=50 Identities=16% Similarity=0.234 Sum_probs=46.5
Q ss_pred CCceeeeEEeCCCCEEEEEEEecCCceEEEeecCccc-cccCceEEEEeec
Q psy9698 39 RPIVKDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMH-TDTGMTLVFQVGD 88 (123)
Q Consensus 39 ~p~~rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H-~~~GM~~~~~V~~ 88 (123)
.|.+.|++.|.||+.+.+.|.+++||.|.+|||...| ...||++.|.|..
T Consensus 247 ~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~ 297 (442)
T 2zoo_A 247 KNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEG 297 (442)
T ss_dssp EECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEES
T ss_pred CCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecC
Confidence 3788999999999999999999999999999999999 5899999999964
No 45
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=98.10 E-value=2.2e-06 Score=67.88 Aligned_cols=49 Identities=20% Similarity=0.403 Sum_probs=41.9
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecC---ccccccCceEEEEeeccCccCC
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHF---VMHTDTGMTLVFQVGDRKQFVR 94 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi---~~H~~~GM~~~~~V~~~~~~~~ 94 (123)
..|.||++.+++|.+++||.|.||||. ..|...||.+.+.|.+.+.+|+
T Consensus 111 ~~i~PG~~~~y~f~~~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~~p~ 162 (327)
T 1kbv_A 111 TFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPK 162 (327)
T ss_dssp TCBCTTEEEEEEEECCSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCCCC
T ss_pred eeecCCCEEEEEEECCCCeEEEEEeCCCChhhhhhcceEEEEEEecCCCCCC
Confidence 358999999999999999999999997 5789999999999976443443
No 46
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.10 E-value=5e-06 Score=54.32 Aligned_cols=40 Identities=25% Similarity=0.388 Sum_probs=35.6
Q ss_pred eeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 43 KDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
+|+..+.||+..++.| +.||.|.|||+ .|...||.+.+.|
T Consensus 58 ~~~~~~~pG~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 97 (98)
T 2plt_A 58 RDDYLNAPGETYSVKL--TAAGEYGYYCE--PHQGAGMVGKIIV 97 (98)
T ss_dssp EEEEECSTTCEEEEEC--CSCEEEEEECG--GGGGGTCEEEEEE
T ss_pred ccceecCCCCEEEEEe--CCCeEEEEEcC--CccccCCeEEEEE
Confidence 5678899999988866 59999999999 7999999999987
No 47
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.08 E-value=7.2e-06 Score=55.14 Aligned_cols=42 Identities=7% Similarity=0.067 Sum_probs=37.3
Q ss_pred eEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 45 TVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 45 Tv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
+..+.||+...+.|.++.||.|.||||...|... |.+.+.|.
T Consensus 70 ~~~i~pG~~~~~~f~~~~~G~y~~~C~~~~~~~~-M~g~i~V~ 111 (112)
T 1iby_A 70 QEVIKAGETKTISFTADKAGAFTIWCQLHPKNIH-LPGTLNVV 111 (112)
T ss_dssp EEEECTTCEEEEEEECCSCEEEEEBCSSSCTTTB-CCEEEEEE
T ss_pred eeEeCCCCEEEEEEECCCCEEEEEECCCCCchHH-CEEEEEEe
Confidence 6678999999999999999999999999887554 99999885
No 48
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.08 E-value=6.4e-06 Score=52.89 Aligned_cols=40 Identities=20% Similarity=0.365 Sum_probs=35.6
Q ss_pred eeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 43 KDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.++..+.||+...+.| +.||.|.|||+ .|...||.+.+.|
T Consensus 51 ~~~~~~~~g~~~~~~f--~~~G~y~~~C~--~H~~~gM~g~i~V 90 (91)
T 1bxv_A 51 HKDLAFSPGETFEATF--SEPGTYTYYCE--PHRGAGMVGKIVV 90 (91)
T ss_dssp EEEEECSTTCEEEEEC--CSCEEEEEECT--TTGGGTCEEEEEE
T ss_pred cccceeCCCCEEEEEe--CCCEEEEEEeC--CCccCCCEEEEEE
Confidence 5778899999888876 89999999999 8998999999987
No 49
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=97.98 E-value=7.1e-06 Score=64.77 Aligned_cols=43 Identities=26% Similarity=0.320 Sum_probs=39.5
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCc-----cccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFV-----MHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~-----~H~~~GM~~~~~V~~~ 89 (123)
.|.||++.+++|.++++|.|.||||.. .|...||.+.+.|.+.
T Consensus 106 ~i~PG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 106 LINPGEKVVLRFKATRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 153 (333)
T ss_dssp CBCTTEEEEEEEECCSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred EeCCCCEEEEEEECCCCEEEEEeecCCcccchhhhhCCCEEEEEEccC
Confidence 589999999999999999999999997 6999999999999743
No 50
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=97.97 E-value=5.9e-06 Score=53.96 Aligned_cols=40 Identities=25% Similarity=0.522 Sum_probs=35.7
Q ss_pred eeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 43 KDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.++..+.||+...+.| +.||.|.|||+ .|.+.||.+.+.|
T Consensus 57 ~~~~~~~~g~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 96 (97)
T 1b3i_A 57 NTKLAIAPGSFYSVTL--GTPGTYSFYCT--PHRGAGMVGTITV 96 (97)
T ss_dssp BCCCCCSCSCCEEEEC--CSCSEEEEECS--STTTTTCEEEEEE
T ss_pred ccceecCCCCEEEEEe--CCCeEEEEEcc--ChhhcCCEEEEEE
Confidence 4677889999988877 89999999999 8999999999987
No 51
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=97.97 E-value=5.2e-06 Score=67.61 Aligned_cols=50 Identities=24% Similarity=0.329 Sum_probs=42.6
Q ss_pred eeEEeCCCCEEEEEEEecCCceEEEeecCc---cccccCceEEEEeeccCccC
Q psy9698 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFV---MHTDTGMTLVFQVGDRKQFV 93 (123)
Q Consensus 44 DTv~v~pg~~~~irf~adnpG~Wl~HCHi~---~H~~~GM~~~~~V~~~~~~~ 93 (123)
+++.|.||++.+++|.+++||.|.||||.. .|...||.+.+.|.+.+.+|
T Consensus 234 ~~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~~P 286 (447)
T 2dv6_A 234 AFTQTDPGEETVVTFKALIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGGLP 286 (447)
T ss_dssp GGCCBCTTCEEEEEEECCSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTCSC
T ss_pred ccEEeCCCCEEEEEEECCCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCCCC
Confidence 566799999999999999999999999974 67889999999997543344
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=97.88 E-value=1.4e-05 Score=63.03 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=39.0
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCc----cccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFV----MHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~----~H~~~GM~~~~~V~~~ 89 (123)
.|.||++.+.+|.++++|.|.||||.. .|...||.+.+.|.+.
T Consensus 107 ~i~pG~~~~y~f~~~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~ 153 (336)
T 1oe1_A 107 NVNPGEQATLRFKADRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPR 153 (336)
T ss_dssp CBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred EeCCCCEEEEEEECCCCeEEEEecCCCCchhHHHhCCCeEEEEEecC
Confidence 589999999999999999999999984 6899999999999743
No 53
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=97.86 E-value=1.5e-05 Score=52.19 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=34.5
Q ss_pred eeeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 43 KDTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
++++.+.||+..++.| +.||.|.|||+ .|.+.||.+.+.|
T Consensus 59 ~~~~~~~~G~~~~~~f--~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1byp_A 59 EEDLLNAPGEEYSVTL--TEKGTYKFYCA--PHAGAGMVGKVTV 98 (99)
T ss_dssp TTCCBCSTTCEEEEEE--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred ccceeeCCCCEEEEEe--CCCcEEEEEcC--CccccCCEEEEEE
Confidence 4556788999888866 59999999999 7999999999987
No 54
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=97.86 E-value=1.1e-05 Score=53.16 Aligned_cols=39 Identities=21% Similarity=0.341 Sum_probs=35.0
Q ss_pred eeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 44 DTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
+++.+.||+..++.| +.||.|.|||+ .|...||.+.+.|
T Consensus 63 ~~~~~~pG~~~~~tf--~~~G~y~y~C~--~H~~~gM~G~i~V 101 (102)
T 1kdj_A 63 NDLLSEDEPSFKAKV--STPGTYTFYCT--PHKSANMKGTLTV 101 (102)
T ss_dssp TCCBBTTBCEEEECC--CSCEEEEEECS--TTGGGTCEEEEEE
T ss_pred cceecCCCCEEEEEe--CCCeEEEEEeC--CCcccCCeEEEEE
Confidence 567788999888877 89999999999 9999999999987
No 55
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=97.68 E-value=3.9e-05 Score=60.54 Aligned_cols=43 Identities=28% Similarity=0.451 Sum_probs=39.0
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCc----cccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFV----MHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~----~H~~~GM~~~~~V~~~ 89 (123)
.|.||++.+++|.++++|.|.||||.. .|...||.+.+.|.+.
T Consensus 113 ~i~PG~~~~y~~~~~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~ 159 (340)
T 2bw4_A 113 QVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPR 159 (340)
T ss_dssp CBCTTEEEEEEEECCSCEEEEEECCCTTCHHHHHHTTCEEEEEEECT
T ss_pred EeCCCCEEEEEEECCCCeEEEEEcCCCCchhhHHhCcCEEEEEEccC
Confidence 489999999999999999999999986 5889999999999754
No 56
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.66 E-value=4.9e-05 Score=54.61 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=36.2
Q ss_pred EeCCCC--EEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 47 GNLPSG--YTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 47 ~v~pg~--~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.|.||+ ..++.|.+ .||.+.||||+..|...||.+.+.|
T Consensus 113 ~i~PG~sgt~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV 153 (154)
T 2cal_A 113 VPKDGKFGYTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVV 153 (154)
T ss_dssp CCBTTBEEEEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred ccCCCCceEEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEE
Confidence 567899 99999999 9999999999999999999999987
No 57
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=97.63 E-value=4.9e-05 Score=49.73 Aligned_cols=39 Identities=26% Similarity=0.342 Sum_probs=33.6
Q ss_pred eeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 44 DTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
+.+.+.||+..++.| +.||.|.|+|+ .|...||.+.+.|
T Consensus 60 ~~~~~~~G~~~~~tf--~~~G~y~~~C~--~H~~~gM~G~i~V 98 (99)
T 1plc_A 60 EDLLNAKGETFEVAL--SNKGEYSFYCS--PHQGAGMVGKVTV 98 (99)
T ss_dssp TCCBCSTTCEEEEEC--CSCEEEEEECG--GGTTTTCEEEEEE
T ss_pred CccccCCCCEEEEEE--CCCceEEEEcC--CCcccCCEEEEEE
Confidence 446678999888866 59999999999 7999999999987
No 58
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=97.61 E-value=0.00011 Score=48.39 Aligned_cols=41 Identities=20% Similarity=0.166 Sum_probs=36.5
Q ss_pred eEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 45 TVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 45 Tv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
...+.||....+.|.++.||.+.|+|. .|...||.+.+.|.
T Consensus 60 ~~~~~pg~~~~~~~t~~~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 60 DVVVESGKEKNITVKPKSAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp EEEECTTCEEEEEECCCSCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred ceeecCCcceeEEEecccCceEEEECc--cccCCCCEEEEEEC
Confidence 456789999999999999999999996 59999999999873
No 59
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=97.40 E-value=0.00018 Score=55.49 Aligned_cols=45 Identities=20% Similarity=0.276 Sum_probs=38.8
Q ss_pred EEeCCCCEEEEEEEecC-------------CceEEEeecCc------cccccCceEEEEeeccC
Q psy9698 46 VGNLPSGYTVVRVHFNN-------------PGMWYFHCHFV------MHTDTGMTLVFQVGDRK 90 (123)
Q Consensus 46 v~v~pg~~~~irf~adn-------------pG~Wl~HCHi~------~H~~~GM~~~~~V~~~~ 90 (123)
..|.||+..+.+|.++. +|.|.||||.. .|...||.+.+.|.+..
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~ 142 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKG 142 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTT
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCC
Confidence 46889999999999975 58999999984 57899999999997543
No 60
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=97.37 E-value=0.0002 Score=56.53 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=37.8
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecCccc--c-ccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHFVMH--T-DTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi~~H--~-~~GM~~~~~V~~~ 89 (123)
..|.||++.+.+|.++.+|.|.||||.... . ..||.+.|.|.+.
T Consensus 80 ~~i~PG~~~~y~f~~~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~ 126 (318)
T 3g5w_A 80 HAIEPGDTFTYKFKAEPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPK 126 (318)
T ss_dssp CCBCTTCEEEEEEECCSCEEEEEECCSSHHHHHHHSCCEEEEEEECS
T ss_pred ccCCCCCEEEEEEEcCCCEEEEEEccCChhhhhccCCCEEEEEEcCC
Confidence 468999999999999999999999998543 2 4799999999754
No 61
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=97.25 E-value=0.00052 Score=57.71 Aligned_cols=43 Identities=21% Similarity=0.386 Sum_probs=40.3
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|.++.+|.|.||||...+...||.+.|.|.+.
T Consensus 82 ~I~PG~s~tY~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~ 124 (552)
T 1aoz_A 82 AINPGETFFYNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPP 124 (552)
T ss_dssp CBCTTCEEEEEEECCSCEEEEEEECSTTTGGGTCEEEEEEECC
T ss_pred CcCCCCeEEEEEECCCCEEEEEEECchhHHhccCeeeEEEeCC
Confidence 5899999999999999999999999999999999999999754
No 62
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=97.17 E-value=0.00058 Score=54.11 Aligned_cols=45 Identities=18% Similarity=0.286 Sum_probs=39.4
Q ss_pred eEEeCCCCEEEEEEEecCCceEEEeecCcc--ccc-cCceEEEEeecc
Q psy9698 45 TVGNLPSGYTVVRVHFNNPGMWYFHCHFVM--HTD-TGMTLVFQVGDR 89 (123)
Q Consensus 45 Tv~v~pg~~~~irf~adnpG~Wl~HCHi~~--H~~-~GM~~~~~V~~~ 89 (123)
...|.||++.+++|.++.+|.|.||||... +.. .||.+.+.|.+.
T Consensus 80 q~~I~PG~~~~y~f~~~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~ 127 (339)
T 2zwn_A 80 QQPIEAGDSYTYKFKADRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPK 127 (339)
T ss_dssp BCCBCTTCEEEEEEECCSCEEEEEECCSSHHHHTTTSCCEEEEEEECS
T ss_pred cCccCCCCeEEEEEECCCCEEEEEEecCCchhhhhcCCceEeEEecCC
Confidence 356899999999999999999999999866 677 899999998643
No 63
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=97.13 E-value=0.00066 Score=57.38 Aligned_cols=43 Identities=21% Similarity=0.332 Sum_probs=40.1
Q ss_pred EeCC-CCEEEEEEEecCCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLP-SGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~p-g~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+| |++.+.+|.++.+|.+.||||...|...||.+.|.|.++
T Consensus 115 ~I~P~G~~~~Y~f~~~q~GT~wYH~H~~~q~~~Gl~G~liV~~~ 158 (559)
T 2q9o_A 115 PIPPKGGQRTYRWRARQYGTSWYHSHFSAQYGNGVVGTIQINGP 158 (559)
T ss_dssp CBCTTTEEEEEEEECCSCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred ccCCCCCeEEEEEECCCCEEEEEEEcccchhcCCceEEEEecCC
Confidence 4899 999999999999999999999999999999999999754
No 64
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.04 E-value=0.0013 Score=42.85 Aligned_cols=38 Identities=24% Similarity=0.422 Sum_probs=32.9
Q ss_pred eEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 45 TVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 45 Tv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
...+.||+..++.| +.||.+.|+|-+ |...||.+.+.|
T Consensus 60 ~~~~~~g~~~~~tf--~~~G~y~y~C~~--H~~~gM~G~I~V 97 (98)
T 1iuz_A 60 DYLNSKGETVVRKL--STPGVYGVYCEP--HAGAGMKMTITV 97 (98)
T ss_dssp EEECSTTCEEEEEC--CSCEEEEEECTT--TGGGTCEEEEEE
T ss_pred ccccCCCCEEEEEc--CCCEEEEEEchh--hccCCCEEEEEE
Confidence 36788999888776 799999999986 999999999987
No 65
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.01 E-value=0.0011 Score=57.15 Aligned_cols=41 Identities=22% Similarity=0.402 Sum_probs=35.9
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecC---ccccccCceEEEEeec
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHF---VMHTDTGMTLVFQVGD 88 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi---~~H~~~GM~~~~~V~~ 88 (123)
..+.||+...+.|.++.||.|.||||. ..|. ||.+.+.|.+
T Consensus 549 ~~i~PG~t~t~~Fta~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 549 MEIGPQMTSSVTFVAANPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp EEECTTCEEEEEEECCSCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred eeeCCCCeEEEEEECCCCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 568899999999999999999999994 4564 9999999964
No 66
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=96.98 E-value=0.00087 Score=52.43 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=36.0
Q ss_pred EeCCCCEEEEEEEec-------------CCceEEEeecCcc------ccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFN-------------NPGMWYFHCHFVM------HTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~ad-------------npG~Wl~HCHi~~------H~~~GM~~~~~V~~~ 89 (123)
.|.||++.+.+|.+. .+|.|.||||... +...||.+.|.|.++
T Consensus 102 ~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~ 163 (299)
T 3t9w_A 102 AVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQ 163 (299)
T ss_dssp CBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred ccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEecc
Confidence 578999999999876 5699999999743 567899999999754
No 67
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=96.98 E-value=0.00067 Score=47.33 Aligned_cols=40 Identities=28% Similarity=0.433 Sum_probs=32.9
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
+.+.||+..++.| +.||.+.|+|- .|...||.+.+.|+++
T Consensus 57 ~~~~pg~t~s~TF--~~~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 57 VKGGFSKEVVFNA--EKEGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp CBCCTTCCEEEEC--CSSEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred cccCCCCEEEEEe--CCCeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 3456777766666 89999999996 8999999999999853
No 68
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=96.96 E-value=0.0011 Score=52.13 Aligned_cols=44 Identities=20% Similarity=0.268 Sum_probs=36.0
Q ss_pred EEeCCCCEEEEEEEecC-------------CceEEEeecCcc------ccccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFNN-------------PGMWYFHCHFVM------HTDTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~adn-------------pG~Wl~HCHi~~------H~~~GM~~~~~V~~~ 89 (123)
..|.||++.+.+|.+.. .|.|.||||... |...||.+.|.|.++
T Consensus 85 ~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~ 147 (313)
T 3tas_A 85 SDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 147 (313)
T ss_dssp CCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred CCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeecc
Confidence 45889999999998764 489999999743 357899999999754
No 69
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=96.93 E-value=0.0011 Score=55.25 Aligned_cols=43 Identities=16% Similarity=0.274 Sum_probs=39.5
Q ss_pred EeCCCCEEEEEEE-ecCCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVH-FNNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~-adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|. ++.+|.+.||||...+...||.+.|.|.++
T Consensus 86 ~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~ 129 (503)
T 1hfu_A 86 PISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDD 129 (503)
T ss_dssp CBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCC
Confidence 4899999999999 688999999999999999999999999754
No 70
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=96.91 E-value=0.0016 Score=54.56 Aligned_cols=43 Identities=19% Similarity=0.312 Sum_probs=39.7
Q ss_pred EeCCCCEEEEEEEe-cCCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHF-NNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~a-dnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|.+ +.+|.+.||||...+...||.+.|.|.++
T Consensus 86 pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~ 129 (499)
T 3pxl_A 86 PISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDP 129 (499)
T ss_dssp CBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCC
Confidence 58999999999999 78999999999999999999999999754
No 71
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=96.91 E-value=0.0016 Score=54.45 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=39.7
Q ss_pred EeCCCCEEEEEEEe-cCCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHF-NNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~a-dnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|.+ +.+|.+.||||...+...||.+.|.|.++
T Consensus 87 pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~ 130 (495)
T 3t6v_A 87 PIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDP 130 (495)
T ss_dssp CBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCc
Confidence 48999999999999 78999999999999999999999999754
No 72
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=96.91 E-value=0.0013 Score=55.10 Aligned_cols=43 Identities=21% Similarity=0.321 Sum_probs=39.5
Q ss_pred EeCCCCEEEEEEE-ecCCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVH-FNNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~-adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|. ++.+|.+.||||...+...||.+.|.|.++
T Consensus 107 ~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~ 150 (521)
T 1v10_A 107 PIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDP 150 (521)
T ss_dssp CBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECT
T ss_pred CcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCC
Confidence 4899999999999 688999999999999999999999999754
No 73
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=96.88 E-value=0.0012 Score=45.83 Aligned_cols=39 Identities=28% Similarity=0.459 Sum_probs=33.0
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
+.+.||+..++.| +.||.|.|+|. .|...||.+.+.|++
T Consensus 56 f~~~pg~t~s~TF--~~pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 56 FKSKINESYTLTV--TEPGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CBCCTTCCEEEEE--CSCEEEEEECG--GGTTTTCEEEEEESS
T ss_pred eecCCCCEEEEEe--CCCeEEEEEeC--CCCcCCcEEEEEECC
Confidence 3456787776666 89999999999 899999999999975
No 74
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=96.82 E-value=0.0016 Score=43.14 Aligned_cols=34 Identities=18% Similarity=0.157 Sum_probs=28.3
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.+.||+...+.| +.||.+.|||++ |. ||.+.+.|
T Consensus 71 ~~~pG~~~~~tf--~~~G~y~y~C~~--H~--gM~G~i~V 104 (105)
T 2ov0_A 71 MMKKEQAYSLTF--TEAGTYDYHCTP--HP--FMRGKVVV 104 (105)
T ss_dssp CBCTTEEEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred ccCCCCEEEEEe--CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 477888777666 899999999987 54 99999887
No 75
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=96.81 E-value=0.0008 Score=55.37 Aligned_cols=44 Identities=11% Similarity=0.161 Sum_probs=39.6
Q ss_pred EEeCCCCEEEEEEEecC-CceEEEeecC----ccccccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFNN-PGMWYFHCHF----VMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~adn-pG~Wl~HCHi----~~H~~~GM~~~~~V~~~ 89 (123)
..|+||++.+.+|.++. +|.|.||||. ..+...||.+.+.|.+.
T Consensus 91 ~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~ 139 (451)
T 2uxt_A 91 RMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDE 139 (451)
T ss_dssp GCBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECH
T ss_pred CcCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecC
Confidence 46889999999999987 9999999999 66889999999999754
No 76
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=96.77 E-value=0.0016 Score=51.84 Aligned_cols=44 Identities=20% Similarity=0.320 Sum_probs=37.2
Q ss_pred EEeCCCCEEEEEEEecCC-------------ceEEEeecC------ccccccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFNNP-------------GMWYFHCHF------VMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~adnp-------------G~Wl~HCHi------~~H~~~GM~~~~~V~~~ 89 (123)
..|+||+..+.+|.++.| |.|.||||. ..+...||.+.+.|.+.
T Consensus 120 ~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~ 182 (343)
T 3cg8_A 120 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRK 182 (343)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECT
T ss_pred ccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecC
Confidence 368999999999998765 889999997 35788999999988754
No 77
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=96.76 E-value=0.0026 Score=54.40 Aligned_cols=43 Identities=14% Similarity=0.282 Sum_probs=40.2
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|.++.+|.+.||||...+...||.+.|.|.++
T Consensus 146 pI~PG~sftY~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p 188 (580)
T 3sqr_A 146 PIAPGDTLTYKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGP 188 (580)
T ss_dssp CBCTTCEEEEEEECCCCEEEEEEECSTTGGGGTCEEEEEEECC
T ss_pred CCCCCCeEEEEEECCCCcceEEeecccccccCcCEEEEEeeCc
Confidence 5899999999999999999999999999999999999999754
No 78
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=96.76 E-value=0.0011 Score=46.27 Aligned_cols=39 Identities=23% Similarity=0.458 Sum_probs=32.4
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
+.+.||+..++.| +.||.+.|+|. .|...||.+.+.|++
T Consensus 58 f~s~pGet~s~TF--~~pG~y~y~C~--~H~~~GM~G~I~V~~ 96 (127)
T 3tu6_A 58 WKGKINEEITVTL--SKPGVYMYQCA--PHVGMGMIGAIVVGE 96 (127)
T ss_dssp CBCCTTCCCEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred eecCCCCEEEEEe--CCCeEEEEEeC--CCCcCCcEEEEEECc
Confidence 4456787766655 89999999999 699999999999975
No 79
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=96.74 E-value=0.0024 Score=53.71 Aligned_cols=43 Identities=21% Similarity=0.390 Sum_probs=40.1
Q ss_pred EeCCCCEEEEEEEec-CCceEEEeecCccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFN-NPGMWYFHCHFVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~ad-npG~Wl~HCHi~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|.++ .+|.+.||||...+...||.+.|.|.+.
T Consensus 82 pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~ 125 (534)
T 1zpu_A 82 PIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDD 125 (534)
T ss_dssp CBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECT
T ss_pred CcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCC
Confidence 589999999999998 8999999999999999999999999754
No 80
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=96.69 E-value=0.0019 Score=53.07 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=39.6
Q ss_pred EEeCCCCEEEEEEEec-CCceEEEeec----CccccccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFN-NPGMWYFHCH----FVMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~ad-npG~Wl~HCH----i~~H~~~GM~~~~~V~~~ 89 (123)
..|.||++.+.+|.+. .+|.+.|||| ...+...||.+.+.|.+.
T Consensus 79 ~~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~~~~q~~~Gl~G~liV~~~ 127 (448)
T 3aw5_A 79 FAITPGESYNYSFDVVNRAGTYLYHPHPHGLTAKQFYMGQLGLVIVEDS 127 (448)
T ss_dssp GCBCTTCEEEEEEECCSCSEEEEEEECCTTTHHHHHHTTCCEEEEEECT
T ss_pred ccCCCCCEEEEEEEcCCCCCceEeccCCCCchHHHHhccceEEEEEeCC
Confidence 4688999999999998 7999999999 677889999999999754
No 81
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=96.64 E-value=0.0026 Score=49.61 Aligned_cols=45 Identities=4% Similarity=-0.020 Sum_probs=38.7
Q ss_pred eEEeCCCCEEEEEEEecCC----------ceEEEeecCcc--ccccCceEEEEeecc
Q psy9698 45 TVGNLPSGYTVVRVHFNNP----------GMWYFHCHFVM--HTDTGMTLVFQVGDR 89 (123)
Q Consensus 45 Tv~v~pg~~~~irf~adnp----------G~Wl~HCHi~~--H~~~GM~~~~~V~~~ 89 (123)
...|+||+..+.+|.++.+ |.|.||||... +...||.+.+.|.+.
T Consensus 111 ~~~I~PG~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~ 167 (306)
T 1sdd_A 111 DDAVAPGQEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKK 167 (306)
T ss_dssp TTCBCTTCEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECT
T ss_pred CCccCCCCeEEEEEEeCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccC
Confidence 4678999999999999654 89999999876 778999999999754
No 82
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=96.29 E-value=0.0037 Score=51.00 Aligned_cols=43 Identities=14% Similarity=0.187 Sum_probs=37.5
Q ss_pred EeCCCCEEEEEEEe--cCCceEEEeecC----ccccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHF--NNPGMWYFHCHF----VMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~a--dnpG~Wl~HCHi----~~H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|.+ +.+|.|.||||. ..+...||.+.+.|.+.
T Consensus 88 ~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~ 136 (439)
T 2xu9_A 88 EIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESS 136 (439)
T ss_dssp CBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCG
T ss_pred cCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCc
Confidence 48999999999996 469999999998 45888999999999753
No 83
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=96.15 E-value=0.0043 Score=51.99 Aligned_cols=44 Identities=18% Similarity=0.246 Sum_probs=38.2
Q ss_pred EEeCCCCEEEEEEEecC-CceEEEeecC----ccccccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFNN-PGMWYFHCHF----VMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~adn-pG~Wl~HCHi----~~H~~~GM~~~~~V~~~ 89 (123)
..|.||++.+.+|.++. +|.+.||||. ..+...||.+.+.|.+.
T Consensus 89 ~~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~ 137 (488)
T 3od3_A 89 GIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDD 137 (488)
T ss_dssp CCBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECH
T ss_pred CcCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCc
Confidence 36889999999999988 5999999998 45778999999999754
No 84
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=96.10 E-value=0.0066 Score=50.67 Aligned_cols=44 Identities=16% Similarity=0.272 Sum_probs=38.3
Q ss_pred EEeCCCCEEEEEEEecC--CceEEEeecC----ccccccCceEEEEeecc
Q psy9698 46 VGNLPSGYTVVRVHFNN--PGMWYFHCHF----VMHTDTGMTLVFQVGDR 89 (123)
Q Consensus 46 v~v~pg~~~~irf~adn--pG~Wl~HCHi----~~H~~~GM~~~~~V~~~ 89 (123)
..|+||++.+.+|.+.. +|.+.||||. ..+...||.+.+.|.+.
T Consensus 123 ~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~ 172 (481)
T 3zx1_A 123 DPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAK 172 (481)
T ss_dssp SCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECS
T ss_pred CcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCc
Confidence 36789999999999976 7999999997 45788999999999754
No 85
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=96.10 E-value=0.01 Score=41.35 Aligned_cols=44 Identities=14% Similarity=0.087 Sum_probs=39.4
Q ss_pred eeeEEeCCCCEEEEEEEec---CCceEEEeecCccccccCceEEEEee
Q psy9698 43 KDTVGNLPSGYTVVRVHFN---NPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~ad---npG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
..+..|.||++..+.|.+. .||.+-|.|-+-.|.. ||.+.+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 82 AFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp EECCCBCTTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred eeeeEECCCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 3566789999999999997 9999999999999988 899999885
No 86
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.09 E-value=0.0082 Score=43.85 Aligned_cols=45 Identities=18% Similarity=0.071 Sum_probs=39.9
Q ss_pred eeeeEEeCCCCEEEEEEEec--CCceEEEeecCccccccCceEEEEee
Q psy9698 42 VKDTVGNLPSGYTVVRVHFN--NPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 42 ~rDTv~v~pg~~~~irf~ad--npG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
...+..|.||+...+.|.+. .||.+-|+|-+-.|.. ||.+.|.|.
T Consensus 120 l~~t~~l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 120 VAHTKLIGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp EEECCCBCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred hccceeeCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 34566789999999999987 8999999999999988 999999885
No 87
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.06 E-value=0.0058 Score=42.15 Aligned_cols=39 Identities=31% Similarity=0.502 Sum_probs=31.7
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
+.+.||+..++.| +.||.+.|+|. .|...||.+.+.|.+
T Consensus 56 ~~~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1pmy_A 56 VKTTVGQEAVVKF--DKEGVYGFKCA--PHYMMGMVALVVVGD 94 (123)
T ss_dssp CBCCTTSCEEEEC--CSCEEEEEECS--TTTTTTCEEEEEESS
T ss_pred eecCCCCEEEEEe--CCCeEEEEEeC--CccccCCEEEEEEcC
Confidence 3456788766555 79999999997 599999999999974
No 88
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.02 E-value=0.0066 Score=41.85 Aligned_cols=38 Identities=29% Similarity=0.511 Sum_probs=30.9
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
.+.||+..++.| +.||.|.|+|. .|...||.+.+.|.+
T Consensus 57 ~~~pG~t~~~tF--~~~G~y~y~C~--~H~~~gM~G~I~V~~ 94 (123)
T 1paz_A 57 KSKINENYVLTV--TQPGAYLVKCT--PHYAMGMIALIAVGD 94 (123)
T ss_dssp BCCTTCCEEEEC--CSCEEEEEECT--TTGGGTCEEEEEESS
T ss_pred ecCCCCEEEEEe--CCCEEEEEEeC--CcccCCCEEEEEEcC
Confidence 345777655555 89999999997 599999999999974
No 89
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=95.92 E-value=0.0048 Score=54.30 Aligned_cols=45 Identities=9% Similarity=0.084 Sum_probs=39.3
Q ss_pred EEeCCCCEEEEEEEec----------CCceEEEeecCcc--ccccCceEEEEeeccC
Q psy9698 46 VGNLPSGYTVVRVHFN----------NPGMWYFHCHFVM--HTDTGMTLVFQVGDRK 90 (123)
Q Consensus 46 v~v~pg~~~~irf~ad----------npG~Wl~HCHi~~--H~~~GM~~~~~V~~~~ 90 (123)
..|+||+..+.+|.+. .+|.|.||||... |...||.+.|.|.+..
T Consensus 243 ~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~GL~G~liV~~~~ 299 (770)
T 2r7e_B 243 NFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHSGLIGPLLVCHTN 299 (770)
T ss_dssp SCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHTSCCEEEEEECST
T ss_pred CccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhCCceeeEEECCCc
Confidence 3688999999999987 7899999999876 6789999999997543
No 90
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=95.82 E-value=0.013 Score=38.86 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=29.9
Q ss_pred eeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 44 DTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
++-.+.||+...+.| +.||.+.|+|-+ |. ||.+.+.|
T Consensus 69 ~s~~l~~g~~~~~tf--~~~G~y~~~C~~--H~--~M~G~I~V 105 (106)
T 1id2_A 69 RGEMMTKDQAYAITF--NEAGSYDYFCTP--HP--FMRGKVIV 105 (106)
T ss_dssp ECCCBCTTEEEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred cccccCCCCEEEEEe--CCCEEEEEEeCC--CC--CCEEEEEE
Confidence 334567888877776 799999999987 65 99999887
No 91
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=95.52 E-value=0.015 Score=50.03 Aligned_cols=43 Identities=14% Similarity=0.210 Sum_probs=38.4
Q ss_pred EeCCCCEEEEEEEec-CCceEEEeecCcc----ccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFN-NPGMWYFHCHFVM----HTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~ad-npG~Wl~HCHi~~----H~~~GM~~~~~V~~~ 89 (123)
.|.||++.+.+|.++ .+|.+.||||... |...||.+.|.|.+.
T Consensus 148 ~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~ 195 (612)
T 2g23_A 148 AVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDD 195 (612)
T ss_dssp CBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTTTCEEEEEEECH
T ss_pred CCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhccceeEEEEcCc
Confidence 588999999999997 6999999999975 788999999999754
No 92
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=95.39 E-value=0.013 Score=49.96 Aligned_cols=46 Identities=13% Similarity=0.203 Sum_probs=38.7
Q ss_pred eEEeCCCCEEEEEEEecC------Cc----eEEEeecCc--cccccCceEEEEeeccC
Q psy9698 45 TVGNLPSGYTVVRVHFNN------PG----MWYFHCHFV--MHTDTGMTLVFQVGDRK 90 (123)
Q Consensus 45 Tv~v~pg~~~~irf~adn------pG----~Wl~HCHi~--~H~~~GM~~~~~V~~~~ 90 (123)
...|+||+..+.+|.+.. +| .|.||||.. .|...||.+.|.|.+..
T Consensus 120 ~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~ 177 (647)
T 1sdd_B 120 DNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKG 177 (647)
T ss_dssp -CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTT
T ss_pred CcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCcccccccCccCEEEeeCC
Confidence 456899999999999976 58 999999994 57889999999997543
No 93
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=95.30 E-value=0.032 Score=38.73 Aligned_cols=45 Identities=20% Similarity=0.218 Sum_probs=39.3
Q ss_pred eeeeEEeCCCCEEEEEEEec--CCc-eEEEeecCccccccCceEEEEee
Q psy9698 42 VKDTVGNLPSGYTVVRVHFN--NPG-MWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 42 ~rDTv~v~pg~~~~irf~ad--npG-~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
...+..|.||++..+.|.+. .|| .+-|.|-+-.|.. ||.+.+.|.
T Consensus 80 ~~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 80 IAHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EEECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred hccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 34566789999999999998 899 5999999999999 999999885
No 94
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=95.25 E-value=0.025 Score=39.08 Aligned_cols=37 Identities=16% Similarity=0.110 Sum_probs=30.1
Q ss_pred eeEEeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 44 DTVGNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 44 DTv~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
++-.+.||+...+.| +.||.+.|+|-+ |. ||.+.+.|
T Consensus 95 ~s~~l~pG~t~~~tF--~~~G~y~y~C~~--H~--gM~G~I~V 131 (132)
T 3c75_A 95 RGEMMTKDQAYAITF--NEAGSYDYFCTP--HP--FMRGKVIV 131 (132)
T ss_dssp ECCCBCTTEEEEEEE--CSCEEEEEECSS--CT--TCEEEEEE
T ss_pred cccccCCCCEEEEEc--CCCEEEEEEeCC--Cc--CCEEEEEE
Confidence 344567888887776 799999999986 65 99999987
No 95
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.17 E-value=0.039 Score=38.33 Aligned_cols=44 Identities=18% Similarity=0.193 Sum_probs=38.4
Q ss_pred eeeEEeCCCCEEEEEEEec--CCce-EEEeecCccccccCceEEEEee
Q psy9698 43 KDTVGNLPSGYTVVRVHFN--NPGM-WYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 43 rDTv~v~pg~~~~irf~ad--npG~-Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
..+..|.||++..+.|.+. .||. +-|.|-+-.|.. ||.+.+.|.
T Consensus 82 ~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 82 AHTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp EECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 3566789999999999998 7865 999999999988 899999885
No 96
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=94.98 E-value=0.015 Score=48.87 Aligned_cols=43 Identities=12% Similarity=0.170 Sum_probs=36.9
Q ss_pred EeCCCCEEEEEEEecC-CceEEEeecCcc----ccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFNN-PGMWYFHCHFVM----HTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~adn-pG~Wl~HCHi~~----H~~~GM~~~~~V~~~ 89 (123)
.|+||++.+.+|.++. +|.+.||||... |...||.+.+.|.+.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~ 158 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDP 158 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECT
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECC
Confidence 3789999999999987 589999999864 567999999999764
No 97
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.64 E-value=0.06 Score=37.36 Aligned_cols=44 Identities=18% Similarity=0.182 Sum_probs=38.1
Q ss_pred eeeeEEeCCCCEEEEEEEec--CCce-EEEeecCccccccCceEEEEe
Q psy9698 42 VKDTVGNLPSGYTVVRVHFN--NPGM-WYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 42 ~rDTv~v~pg~~~~irf~ad--npG~-Wl~HCHi~~H~~~GM~~~~~V 86 (123)
...|-.|.||++..+.|.+. .||. +-|.|-+-.|.. ||.+.+.|
T Consensus 81 ~~~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V 127 (128)
T 1nwp_A 81 IAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTL 127 (128)
T ss_dssp EEECCCBCTTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEE
T ss_pred heeeeeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEE
Confidence 34555789999999999997 7876 999999999999 89999887
No 98
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=94.56 E-value=0.062 Score=37.53 Aligned_cols=43 Identities=14% Similarity=0.198 Sum_probs=36.8
Q ss_pred CceeeeEEeCCCCEEEEEEEec---CCceEEEeecCccccccCceEEEEe
Q psy9698 40 PIVKDTVGNLPSGYTVVRVHFN---NPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 40 p~~rDTv~v~pg~~~~irf~ad---npG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.+...|..|.||+...+.|.+. .||.+-|-|. -|. ||.+.+.|
T Consensus 79 ~via~t~~l~pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V 124 (125)
T 3fsa_A 79 RVIAHTKLIGSGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTL 124 (125)
T ss_dssp TCCEECCCBCTTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEE
T ss_pred cceeccceeCCCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEE
Confidence 3667888899999999999987 8999999999 887 99999887
No 99
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=94.23 E-value=0.025 Score=47.05 Aligned_cols=38 Identities=13% Similarity=0.227 Sum_probs=32.2
Q ss_pred CEEEEEEEec-CCceEEEeecCcc----ccccCceEEEEeecc
Q psy9698 52 GYTVVRVHFN-NPGMWYFHCHFVM----HTDTGMTLVFQVGDR 89 (123)
Q Consensus 52 ~~~~irf~ad-npG~Wl~HCHi~~----H~~~GM~~~~~V~~~ 89 (123)
++.+.+|.++ .+|.+.||||... |...||.+.|.|.+.
T Consensus 135 ~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~ 177 (513)
T 2wsd_A 135 KREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDP 177 (513)
T ss_dssp CCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECG
T ss_pred ceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecc
Confidence 6779999986 6999999999853 678899999999754
No 100
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=93.58 E-value=0.085 Score=36.04 Aligned_cols=36 Identities=31% Similarity=0.373 Sum_probs=28.3
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCccccccCceEEEEeec
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
.+.||+..++.| +.||.+.|+|-+ |.. |.+.+.|.+
T Consensus 57 ~~~~g~t~~~tF--~~~G~y~y~C~~--H~~--M~G~I~V~~ 92 (122)
T 2ux6_A 57 KSKINENYKVTF--TAPGVYGVKCTP--HPF--MVGVVQVGD 92 (122)
T ss_dssp BCCTTCCEEEEE--CSCEEEEEEETT--EEE--EEEEEEESS
T ss_pred ecCCCCEEEEEe--CCCEEEEEEeCC--Ccc--CEEEEEEeC
Confidence 345677666665 899999999987 666 999999974
No 101
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=93.16 E-value=0.19 Score=34.98 Aligned_cols=40 Identities=30% Similarity=0.454 Sum_probs=32.7
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecC---ccccccCceEEEEee
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHF---VMHTDTGMTLVFQVG 87 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi---~~H~~~GM~~~~~V~ 87 (123)
+.+.||....+.|.++.||.+.++|.. ..| .+|.+.+.|.
T Consensus 92 ~d~~PG~~~~~~~~~~~~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 92 VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEECBTBCEEEEEECCSCEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred eEeCCCCcEEEEEEcCCCEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 346678888999999999999999976 455 5898888774
No 102
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=92.93 E-value=0.11 Score=43.38 Aligned_cols=43 Identities=14% Similarity=0.220 Sum_probs=36.7
Q ss_pred EeCCCCEEEEEEEecCC-ceEEEeecCc----cccccCceEEEEeecc
Q psy9698 47 GNLPSGYTVVRVHFNNP-GMWYFHCHFV----MHTDTGMTLVFQVGDR 89 (123)
Q Consensus 47 ~v~pg~~~~irf~adnp-G~Wl~HCHi~----~H~~~GM~~~~~V~~~ 89 (123)
.|.||++.+.+|.++.+ |.+-||+|.. .+...||.+.|.|.+.
T Consensus 148 ~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~Gl~G~liI~d~ 195 (612)
T 3gyr_A 148 AVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMAGLYGTYLVRDD 195 (612)
T ss_dssp CBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTTTCEEEEEEECH
T ss_pred ccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhccceeEEEEcCc
Confidence 57899999999999875 7999999973 4678999999999754
No 103
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.66 E-value=0.24 Score=43.00 Aligned_cols=42 Identities=17% Similarity=0.374 Sum_probs=36.7
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecCcccc-ccCceEEEEee
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHFVMHT-DTGMTLVFQVG 87 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi~~H~-~~GM~~~~~V~ 87 (123)
+.+.||....+.|.++.||.+.++|....|. ..+|.+.+.|.
T Consensus 594 ~DaiPGrtnsvtFtadkPGvY~y~CSE~CGa~Hs~M~G~ViVE 636 (638)
T 3sbq_A 594 MEISPQQTSSITFVADKPGLHWYYCSWFCHALHMEMVGRMMVE 636 (638)
T ss_dssp EEECTTCEEEEEEECCSCEEEEEECCSCCSTTCTTCEEEEEEE
T ss_pred eeeCCCCeEEEEEEcCCCEEEEEECCCcCCCCcccceEEEEEe
Confidence 4677999999999999999999999987765 36899999886
No 104
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=90.79 E-value=0.54 Score=34.10 Aligned_cols=42 Identities=26% Similarity=0.351 Sum_probs=35.2
Q ss_pred EEeCCCCEEEEEEEecCCceEEEeecC-ccccccCceEEEEee
Q psy9698 46 VGNLPSGYTVVRVHFNNPGMWYFHCHF-VMHTDTGMTLVFQVG 87 (123)
Q Consensus 46 v~v~pg~~~~irf~adnpG~Wl~HCHi-~~H~~~GM~~~~~V~ 87 (123)
+.+.||....+.|.++.||.+.+.|.. .-+...+|.+.+.|.
T Consensus 125 ~da~PG~~n~~~~~~~kpG~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 125 VEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEECTTBCEEEEEECCSCEEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEecCCceeEEEEEeCCCEEEEEECCcCCCCCcCCCEEEEEEe
Confidence 455689999999999999999999985 556678999988875
No 105
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=62.67 E-value=10 Score=25.53 Aligned_cols=32 Identities=28% Similarity=0.534 Sum_probs=28.2
Q ss_pred EEEecCCceEEEeecCccccccCceEEE-Eeec
Q psy9698 57 RVHFNNPGMWYFHCHFVMHTDTGMTLVF-QVGD 88 (123)
Q Consensus 57 rf~adnpG~Wl~HCHi~~H~~~GM~~~~-~V~~ 88 (123)
.+..+.+|...|-|=...|=..||.+.+ .|..
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~ 105 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGA 105 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECC
Confidence 4667899999999999999999999999 8753
No 106
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=53.19 E-value=24 Score=24.49 Aligned_cols=32 Identities=28% Similarity=0.481 Sum_probs=28.6
Q ss_pred EEEe-cCCceEEEeecCccccccCceEEEEeec
Q psy9698 57 RVHF-NNPGMWYFHCHFVMHTDTGMTLVFQVGD 88 (123)
Q Consensus 57 rf~a-dnpG~Wl~HCHi~~H~~~GM~~~~~V~~ 88 (123)
.|.. +.+|...|-|=...|=..||.+.+.|..
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~ 108 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVA 108 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEEC
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcC
Confidence 4667 8899999999999999999999999964
No 107
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=49.32 E-value=22 Score=23.53 Aligned_cols=31 Identities=26% Similarity=0.619 Sum_probs=28.1
Q ss_pred EEEecCCceEEEeecCccccccCceEEEEee
Q psy9698 57 RVHFNNPGMWYFHCHFVMHTDTGMTLVFQVG 87 (123)
Q Consensus 57 rf~adnpG~Wl~HCHi~~H~~~GM~~~~~V~ 87 (123)
.+..+.||...|-|=...|=..||-+.+.|.
T Consensus 73 ~v~L~~~G~~yFic~~~gHC~~GmKl~I~V~ 103 (109)
T 1ws8_A 73 SIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 103 (109)
T ss_dssp EEECCSSEEEEEECCSTTTTTTTCEEEEEEC
T ss_pred EEEECCCcCEEEECCCCCcccCCCEEEEEEc
Confidence 4677899999999999999999999999985
No 108
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=41.24 E-value=31 Score=26.97 Aligned_cols=42 Identities=12% Similarity=0.288 Sum_probs=32.5
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCcc-ccccCceEEEEeec
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVM-HTDTGMTLVFQVGD 88 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~-H~~~GM~~~~~V~~ 88 (123)
.+.||....+.|.++.||.+...|.-.. .-...|-..+.|.+
T Consensus 222 daiPG~~n~~~~~~~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 222 DAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVKAVS 264 (298)
T ss_dssp EECTTCCEEEEEECSSSEEEEECCCSCCSTTTTSCCEEEEEEC
T ss_pred EecCCceEEEEEEeCCCEEEEEEcccccCcCccCCeeEEEEEc
Confidence 3448999999999999999999998544 34456777777653
No 109
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=37.20 E-value=52 Score=20.88 Aligned_cols=33 Identities=30% Similarity=0.608 Sum_probs=26.6
Q ss_pred CCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 51 SGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 51 g~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.|..+|.+ + +|...|-|=...|=..||-+.+.|
T Consensus 58 ~G~~~v~L--~-~g~~yFic~~~~HC~~Gmkl~I~v 90 (91)
T 1f56_A 58 SGQDRIKL--T-RGQNYFICSFPGHCGGGMKIAINA 90 (91)
T ss_dssp SSEEEEEC--C-SEEEEEECCSTTTTTTTCEEEEEE
T ss_pred CCCcEEEe--C-CCCeEEEcCCCCccccCCEEEEEE
Confidence 34444544 4 899999999999999999998877
No 110
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=36.37 E-value=53 Score=24.33 Aligned_cols=41 Identities=17% Similarity=0.181 Sum_probs=32.1
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCcccc-ccCceEEEEee
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHT-DTGMTLVFQVG 87 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~-~~GM~~~~~V~ 87 (123)
.+.||....+.|.++.||.+...|.-.... ...|...+.|.
T Consensus 74 daiPGr~n~l~~~~~~pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 74 YAMAGMQTRLHLIANEPGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp EECTTCCEEEEECCSSSEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred EecCCceEEEEEEeCCCeEEEEEcccccccchhhceEEEEEE
Confidence 455899999999999999999999865544 34566666665
No 111
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=32.89 E-value=61 Score=20.70 Aligned_cols=33 Identities=30% Similarity=0.645 Sum_probs=26.7
Q ss_pred CCEEEEEEEecCCceEEEeecCccccccCceEEEEe
Q psy9698 51 SGYTVVRVHFNNPGMWYFHCHFVMHTDTGMTLVFQV 86 (123)
Q Consensus 51 g~~~~irf~adnpG~Wl~HCHi~~H~~~GM~~~~~V 86 (123)
.+..+|. . .+|...|-|=...|=..||-+.+.|
T Consensus 63 ~G~~~v~--L-~~g~~yFic~~~~HC~~Gmkl~I~V 95 (96)
T 2cbp_A 63 SGRDQIK--L-PKGQSYFICNFPGHCQSGMKIAVNA 95 (96)
T ss_dssp SSEEEEE--C-CSEEEEEECCSTTTGGGTCEEEEEE
T ss_pred CCCeEEE--e-cCCCEEEEcCCCCccccCCEEEEEE
Confidence 3444444 4 6999999999999999999998877
No 112
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=22.81 E-value=1.1e+02 Score=23.12 Aligned_cols=41 Identities=12% Similarity=0.270 Sum_probs=29.4
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCcccc-ccCceEEEEee
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHT-DTGMTLVFQVG 87 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~-~~GM~~~~~V~ 87 (123)
.+.||....+.|.++.||.+...|.-..-. ...|...+.|-
T Consensus 204 da~PG~~n~~~~~~~~~G~y~g~Cse~CG~~H~~M~~~v~vv 245 (262)
T 2gsm_B 204 DAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVV 245 (262)
T ss_dssp EECBTCCEEEEEECCSCEEEEECCCSCCSTTGGGCCEEEEEE
T ss_pred EecCCceeEEEEecCCcEEEEEEChHhcccCcccCeEEEEEE
Confidence 344788888899999999999999765433 34566666654
No 113
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=22.46 E-value=1e+02 Score=22.81 Aligned_cols=41 Identities=17% Similarity=0.419 Sum_probs=29.9
Q ss_pred EeCCCCEEEEEEEecCCceEEEeecCcccc-ccCceEEEEee
Q psy9698 47 GNLPSGYTVVRVHFNNPGMWYFHCHFVMHT-DTGMTLVFQVG 87 (123)
Q Consensus 47 ~v~pg~~~~irf~adnpG~Wl~HCHi~~H~-~~GM~~~~~V~ 87 (123)
..-||....+.|.++.||.+...|.-..-. ..-|-..+.|.
T Consensus 173 DaiPGr~n~~~~~~~~~G~y~g~Cse~CG~~Hs~M~~~v~vv 214 (227)
T 1v54_B 173 DAIPGRLNQTTLMSSRPGLYYGQCSEICGSNHSFMPIVLELV 214 (227)
T ss_dssp EECTTCCEEEEECCSSCEEEEECCCSCCSTTGGGCCEEEEEE
T ss_pred EecCCceEEEEEecCCcEEEEEEehhhcccccccCeEEEEEE
Confidence 345788899999999999999999765543 33455666554
No 114
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=20.50 E-value=86 Score=21.02 Aligned_cols=23 Identities=13% Similarity=-0.155 Sum_probs=19.7
Q ss_pred CCCceeeeEEeCCCCEEEEEEEe
Q psy9698 38 PRPIVKDTVGNLPSGYTVVRVHF 60 (123)
Q Consensus 38 ~~p~~rDTv~v~pg~~~~irf~a 60 (123)
.+|.|+=++.|+.+.....+|..
T Consensus 53 ~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 53 ESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCCeEEEEEEcCCCCcEEEEEEE
Confidence 67999999999988878888776
Done!