Query psy9699
Match_columns 123
No_of_seqs 105 out of 199
Neff 6.7
Searched_HMMs 13730
Date Fri Aug 16 17:21:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9699.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/9699hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rtta_ c.23.5.4 (A:) Hypothet 56.5 3.8 0.00028 26.8 2.9 29 89-117 145-173 (174)
2 d2axtz1 f.17.5.1 (Z:1-62) Phot 27.5 35 0.0026 18.9 3.4 32 8-39 30-61 (62)
3 d1ce3a_ g.69.1.1 (A:) Multidom 27.0 11 0.00077 20.6 1.0 11 92-102 40-50 (54)
4 d2i1sa1 d.343.1.1 (A:4-188) Hy 25.5 28 0.002 22.7 3.3 26 63-88 2-27 (185)
5 d1z5ye1 c.47.1.10 (E:49-184) T 25.2 19 0.0013 21.7 2.1 32 88-119 95-134 (136)
6 d1xxxa1 c.1.10.1 (A:5-300) Dih 23.1 22 0.0016 24.6 2.4 24 92-115 17-40 (296)
7 d2fzva1 c.23.5.4 (A:1-233) Put 22.3 25 0.0019 24.0 2.6 27 91-117 180-206 (233)
8 d1pjua2 g.69.1.1 (A:2-15,A:75- 22.3 14 0.001 20.1 0.9 12 92-103 38-49 (56)
9 d1f74a_ c.1.10.1 (A:) N-acetyl 22.2 23 0.0017 24.3 2.4 27 89-115 10-36 (293)
10 d1ctda_ a.39.1.5 (A:) Troponin 21.9 27 0.002 16.9 1.9 16 95-110 16-31 (34)
11 d2a6na1 c.1.10.1 (A:1-292) Dih 21.5 27 0.002 23.9 2.6 24 92-115 11-34 (292)
12 d4sgbi_ g.69.1.1 (I:) Plant ch 20.8 16 0.0012 19.4 0.9 12 92-103 14-25 (51)
13 d1jmma_ b.30.6.1 (A:) V-region 20.7 27 0.002 26.0 2.6 38 63-101 186-223 (377)
14 d1hl2a_ c.1.10.1 (A:) N-acetyl 20.7 29 0.0021 23.8 2.6 26 90-115 10-35 (295)
15 d1yuta1 a.39.1.2 (A:1-98) Calc 20.3 47 0.0034 19.2 3.3 26 95-120 66-91 (98)
No 1
>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=56.52 E-value=3.8 Score=26.76 Aligned_cols=29 Identities=28% Similarity=0.362 Sum_probs=24.6
Q ss_pred eccceeccCceechHhHHHHHHHHHHHHh
Q psy9699 89 SVANYFDETGLLLPDLVENDVSRLHNSIL 117 (123)
Q Consensus 89 ~v~~~Fd~~G~l~~~~f~~~l~~l~~~l~ 117 (123)
...+-||++|.+..+...+.+++++++|.
T Consensus 145 ~~~~~fd~~g~l~de~~~~~l~~~~~~l~ 173 (174)
T d1rtta_ 145 SAQNAFDAQGRLLDDKARELIQQQLQALQ 173 (174)
T ss_dssp SGGGTBCSTTCBCCHHHHHHHHHHHHHHH
T ss_pred chHhccCCCCCcCCHHHHHHHHHHHHHhc
Confidence 35677999999999999999999988764
No 2
>d2axtz1 f.17.5.1 (Z:1-62) Photosystem II reaction center protein Z, PsbZ {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=27.52 E-value=35 Score=18.89 Aligned_cols=32 Identities=3% Similarity=0.112 Sum_probs=24.0
Q ss_pred ccCCCCchhhhhhHHHHHHHHHHHHHHHHhhh
Q psy9699 8 FTPVKRFEPVLIMCVTTYFLMMGILTLYTTYK 39 (123)
Q Consensus 8 ~~~f~~sk~~l~~~V~~YfiLsgilt~~~~~v 39 (123)
+-+|++||+......++.+.|-.+-...+.|+
T Consensus 30 P~gW~~sK~lvfsG~~~W~~LV~lvgilNsfV 61 (62)
T d2axtz1 30 PQDWDRSKQLIFLGSGLWIALVLVVGVLNFFV 61 (62)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccCceEEEchhHHHHHHHHHHhhheee
Confidence 56899999999888888877766655555553
No 3
>d1ce3a_ g.69.1.1 (A:) Multidomain proteinase inhibitor {Winged tobacco (Nicotiana alata) [TaxId: 4087]}
Probab=27.01 E-value=11 Score=20.59 Aligned_cols=11 Identities=27% Similarity=0.751 Sum_probs=9.2
Q ss_pred ceeccCceech
Q psy9699 92 NYFDETGLLLP 102 (123)
Q Consensus 92 ~~Fd~~G~l~~ 102 (123)
+||+.||.|+-
T Consensus 40 ~yfs~dGtfvC 50 (54)
T d1ce3a_ 40 KYFSDDGTFVC 50 (54)
T ss_dssp EEECSSSCEEE
T ss_pred eeEcCCCcEEe
Confidence 59999999864
No 4
>d2i1sa1 d.343.1.1 (A:4-188) Hypothetical protein MM3350 {Methanosarcina mazei [TaxId: 2209]}
Probab=25.55 E-value=28 Score=22.70 Aligned_cols=26 Identities=23% Similarity=0.400 Sum_probs=18.7
Q ss_pred CCceeEEEEEEEeCCCCeeeeEEEee
Q psy9699 63 YDDMYNLVLQYKDTKTGVTRSEQFNK 88 (123)
Q Consensus 63 ~~p~Y~l~l~~~~~~~~~~~~~~~~~ 88 (123)
|+.+|+|+|+..+.+-...|...+..
T Consensus 2 ~~~iY~lrV~L~~~~P~IWRri~V~~ 27 (185)
T d2i1sa1 2 FEKVYHLKLSIKGITPQIWRRIQVPE 27 (185)
T ss_dssp CCEEEEEEEEETTCSSCEEEEEEEET
T ss_pred CceEEEEEEEECCCCCCceEEEEECC
Confidence 67899999998765444456666654
No 5
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]}
Probab=25.17 E-value=19 Score=21.66 Aligned_cols=32 Identities=19% Similarity=0.322 Sum_probs=23.8
Q ss_pred eeccceeccCcee--------chHhHHHHHHHHHHHHhhh
Q psy9699 88 KSVANYFDETGLL--------LPDLVENDVSRLHNSILAE 119 (123)
Q Consensus 88 ~~v~~~Fd~~G~l--------~~~~f~~~l~~l~~~l~~~ 119 (123)
.|.+=++|.+|.+ ..+.+.+.|.++++++.++
T Consensus 95 ~P~~~liD~~G~i~~~~~G~~~~~~l~~~i~~ll~kl~~e 134 (136)
T d1z5ye1 95 APETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLWEKYSKE 134 (136)
T ss_dssp BSEEEEECTTSCEEEEEESCCCHHHHHHHTHHHHHHHHHT
T ss_pred cceEEEEcCCCEEEEEEEcCCCHHHHHHHHHHHHHHHHHh
Confidence 4666678888765 4567888888888888765
No 6
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.10 E-value=22 Score=24.60 Aligned_cols=24 Identities=17% Similarity=0.134 Sum_probs=20.9
Q ss_pred ceeccCceechHhHHHHHHHHHHH
Q psy9699 92 NYFDETGLLLPDLVENDVSRLHNS 115 (123)
Q Consensus 92 ~~Fd~~G~l~~~~f~~~l~~l~~~ 115 (123)
.=||+||.++.+.+.+.++.+++.
T Consensus 17 TPf~~dg~iD~~~l~~~i~~li~~ 40 (296)
T d1xxxa1 17 TPFSGDGSLDTATAARLANHLVDQ 40 (296)
T ss_dssp CCBCTTSCBCHHHHHHHHHHHHHT
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHc
Confidence 358999999999999999988763
No 7
>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}
Probab=22.26 E-value=25 Score=23.96 Aligned_cols=27 Identities=15% Similarity=0.336 Sum_probs=22.3
Q ss_pred cceeccCceechHhHHHHHHHHHHHHh
Q psy9699 91 ANYFDETGLLLPDLVENDVSRLHNSIL 117 (123)
Q Consensus 91 ~~~Fd~~G~l~~~~f~~~l~~l~~~l~ 117 (123)
.+-||++|.+..+...+.+..+.+++.
T Consensus 180 ~~~fd~~G~l~de~~~erl~~l~~~L~ 206 (233)
T d2fzva1 180 FQEFDAAGRMKPSPYYDRIADVMEELV 206 (233)
T ss_dssp GGTBCTTSCBCSSHHHHHHHHHHHHHH
T ss_pred hhccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 456899999998888888888887665
No 8
>d1pjua2 g.69.1.1 (A:2-15,A:75-116) Wound-induced proteinase inhibitor-II {Tomato (Lycopersicon esculentum) [TaxId: 4081]}
Probab=22.26 E-value=14 Score=20.13 Aligned_cols=12 Identities=25% Similarity=0.628 Sum_probs=9.8
Q ss_pred ceeccCceechH
Q psy9699 92 NYFDETGLLLPD 103 (123)
Q Consensus 92 ~~Fd~~G~l~~~ 103 (123)
+||+.||.|+-+
T Consensus 38 ~Yfs~dGtFvCe 49 (56)
T d1pjua2 38 YYFGKDGKFVCE 49 (56)
T ss_dssp EEECTTSCEEEE
T ss_pred eeECCCCcEEec
Confidence 599999998743
No 9
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]}
Probab=22.18 E-value=23 Score=24.35 Aligned_cols=27 Identities=11% Similarity=0.135 Sum_probs=22.1
Q ss_pred eccceeccCceechHhHHHHHHHHHHH
Q psy9699 89 SVANYFDETGLLLPDLVENDVSRLHNS 115 (123)
Q Consensus 89 ~v~~~Fd~~G~l~~~~f~~~l~~l~~~ 115 (123)
++..-||+||.++.+.+.+.++.++++
T Consensus 10 ~~~TPf~~dg~iD~~~l~~~i~~li~~ 36 (293)
T d1f74a_ 10 ALLVSFNEDGTINEKGLRQIIRHNIDK 36 (293)
T ss_dssp ECCCCBCTTSCBCHHHHHHHHHHHHHT
T ss_pred eEECCCCCCCCcCHHHHHHHHHHHHHh
Confidence 344558999999999999999988753
No 10
>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=21.86 E-value=27 Score=16.91 Aligned_cols=16 Identities=6% Similarity=0.098 Sum_probs=11.7
Q ss_pred ccCceechHhHHHHHH
Q psy9699 95 DETGLLLPDLVENDVS 110 (123)
Q Consensus 95 d~~G~l~~~~f~~~l~ 110 (123)
+.||+++.+.|..-+.
T Consensus 16 NaDGyiD~eEl~~ilr 31 (34)
T d1ctda_ 16 NADGYIDIEELGEILR 31 (34)
T ss_dssp SSSSCBCHHHHHHHHH
T ss_pred CCcccccHHHHHHHHH
Confidence 3579999988766553
No 11
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]}
Probab=21.46 E-value=27 Score=23.94 Aligned_cols=24 Identities=17% Similarity=0.108 Sum_probs=20.8
Q ss_pred ceeccCceechHhHHHHHHHHHHH
Q psy9699 92 NYFDETGLLLPDLVENDVSRLHNS 115 (123)
Q Consensus 92 ~~Fd~~G~l~~~~f~~~l~~l~~~ 115 (123)
.-||+||.++.+.+.+.++.+++.
T Consensus 11 TPf~~d~~iD~~~~~~~i~~l~~~ 34 (292)
T d2a6na1 11 TPMDEKGNVCRASLKKLIDYHVAS 34 (292)
T ss_dssp CCBCTTSSBCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHc
Confidence 358999999999999999988763
No 12
>d4sgbi_ g.69.1.1 (I:) Plant chymotrypsin inhibitor {Potato tuber (Solanum tuberosum) [TaxId: 4113]}
Probab=20.77 E-value=16 Score=19.45 Aligned_cols=12 Identities=25% Similarity=0.764 Sum_probs=9.8
Q ss_pred ceeccCceechH
Q psy9699 92 NYFDETGLLLPD 103 (123)
Q Consensus 92 ~~Fd~~G~l~~~ 103 (123)
+||.+||.|+-+
T Consensus 14 ~Yfs~dGtFvCe 25 (51)
T d4sgbi_ 14 NYYSANGAFICE 25 (51)
T ss_dssp EEECTTCCEEEE
T ss_pred ceEcCCCcEEeC
Confidence 589999998754
No 13
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II, PAC) {Streptococcus mutans [TaxId: 1309]}
Probab=20.71 E-value=27 Score=26.00 Aligned_cols=38 Identities=13% Similarity=0.182 Sum_probs=18.5
Q ss_pred CCceeEEEEEEEeCCCCeeeeEEEeeeccceeccCceec
Q psy9699 63 YDDMYNLVLQYKDTKTGVTRSEQFNKSVANYFDETGLLL 101 (123)
Q Consensus 63 ~~p~Y~l~l~~~~~~~~~~~~~~~~~~v~~~Fd~~G~l~ 101 (123)
.||.-++-+-...+...+....++...+ +||||||...
T Consensus 186 ~DPT~t~f~~~~~g~~~~~~~~~v~~~v-kFYDe~G~~i 223 (377)
T d1jmma_ 186 TDPTLGVFASAYTGQVEKNTSIFIKNEF-TFYDEDGKPI 223 (377)
T ss_dssp SSGGGCEEEECCCSSCBSSCEEEEEEEE-EEEETTSCBC
T ss_pred cCCceEEEEEeeccccccccceEEEEEE-EEECCCCCEe
Confidence 4676655433222221111223333333 5999999864
No 14
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]}
Probab=20.69 E-value=29 Score=23.78 Aligned_cols=26 Identities=15% Similarity=0.013 Sum_probs=21.7
Q ss_pred ccceeccCceechHhHHHHHHHHHHH
Q psy9699 90 VANYFDETGLLLPDLVENDVSRLHNS 115 (123)
Q Consensus 90 v~~~Fd~~G~l~~~~f~~~l~~l~~~ 115 (123)
+..-||+||.++.+.+.+.++.+++.
T Consensus 10 ~~TPf~~dg~iD~~~l~~~i~~l~~~ 35 (295)
T d1hl2a_ 10 LLTPFDQQQALDKASLRRLVQFNIQQ 35 (295)
T ss_dssp CCCCBCTTSSBCHHHHHHHHHHHHHH
T ss_pred eECCCCCCcCcCHHHHHHHHHHHHHc
Confidence 34458999999999999999988763
No 15
>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}
Probab=20.33 E-value=47 Score=19.20 Aligned_cols=26 Identities=15% Similarity=0.051 Sum_probs=19.6
Q ss_pred ccCceechHhHHHHHHHHHHHHhhhh
Q psy9699 95 DETGLLLPDLVENDVSRLHNSILAEK 120 (123)
Q Consensus 95 d~~G~l~~~~f~~~l~~l~~~l~~~k 120 (123)
|.||.+..+.|...+.++......++
T Consensus 66 d~DG~IdF~EF~~l~~~l~~~~~k~~ 91 (98)
T d1yuta1 66 NQDSELKFNEYWRLIGELAKEIRKKK 91 (98)
T ss_dssp TCCSCBCHHHHHHHHHHHHHHHHHTB
T ss_pred CCCCcCCHHHHHHHHHHHHHHHhHHH
Confidence 56788888888888888777665544
Done!