Query psy97
Match_columns 339
No_of_seqs 238 out of 1095
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 17:21:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy97.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/97hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qag_B Septin-6, protein NEDD5 100.0 1.5E-47 5.2E-52 382.9 7.0 197 138-338 142-347 (427)
2 3sop_A Neuronal-specific septi 100.0 2.3E-45 7.7E-50 346.3 15.0 171 125-297 94-270 (270)
3 2qag_C Septin-7; cell cycle, c 100.0 7E-42 2.4E-46 341.3 12.4 198 138-338 133-343 (418)
4 2qnr_A Septin-2, protein NEDD5 100.0 1.5E-38 5.2E-43 303.3 13.4 173 129-303 113-291 (301)
5 2qag_A Septin-2, protein NEDD5 100.0 2.3E-38 8E-43 309.2 8.9 166 137-303 139-310 (361)
6 3t5d_A Septin-7; GTP-binding p 100.0 1E-36 3.5E-41 284.9 12.4 159 138-299 110-274 (274)
7 3sop_A Neuronal-specific septi 99.8 5.6E-20 1.9E-24 172.9 10.2 141 10-156 83-231 (270)
8 2qag_B Septin-6, protein NEDD5 99.8 1.7E-20 5.9E-25 187.5 7.0 142 9-156 117-264 (427)
9 3t5d_A Septin-7; GTP-binding p 99.7 1.1E-17 3.8E-22 155.9 10.6 165 9-195 87-263 (274)
10 2qag_A Septin-2, protein NEDD5 99.6 8E-16 2.7E-20 149.9 8.1 144 8-155 116-265 (361)
11 2qag_C Septin-7; cell cycle, c 99.6 1.3E-15 4.3E-20 151.9 5.7 137 10-155 111-255 (418)
12 2qnr_A Septin-2, protein NEDD5 99.5 1.7E-14 6E-19 137.1 11.2 142 9-156 98-247 (301)
13 1h65_A Chloroplast outer envel 98.1 1.7E-06 5.9E-11 79.7 4.9 98 141-254 117-233 (270)
14 1wf3_A GTP-binding protein; GT 96.1 0.0085 2.9E-07 56.4 6.6 131 144-285 87-258 (301)
15 1h65_A Chloroplast outer envel 95.5 0.014 4.6E-07 53.4 5.2 96 39-150 118-230 (270)
16 4dhe_A Probable GTP-binding pr 87.5 1.2 4.1E-05 38.1 6.8 56 50-105 128-191 (223)
17 4dhe_A Probable GTP-binding pr 84.6 2.1 7.1E-05 36.6 6.8 47 151-197 128-175 (223)
18 3pqc_A Probable GTP-binding pr 80.4 2.2 7.6E-05 35.1 5.2 56 50-105 117-174 (195)
19 1svi_A GTP-binding protein YSX 79.1 2.7 9.3E-05 34.8 5.3 56 50-105 118-175 (195)
20 1svi_A GTP-binding protein YSX 73.2 3.7 0.00013 34.0 4.5 62 144-205 106-174 (195)
21 3pqc_A Probable GTP-binding pr 72.6 4.3 0.00015 33.3 4.8 55 151-205 117-173 (195)
22 2qpt_A EH domain-containing pr 56.9 12 0.00041 37.9 5.3 42 50-91 202-244 (550)
23 1nrj_B SR-beta, signal recogni 53.3 1.8 6E-05 37.0 -1.3 77 165-242 119-200 (218)
24 2qpt_A EH domain-containing pr 51.4 18 0.00062 36.5 5.6 43 151-193 202-245 (550)
25 3def_A T7I23.11 protein; chlor 38.4 39 0.0013 29.9 5.2 30 50-79 130-165 (262)
26 3lxx_A GTPase IMAP family memb 38.0 28 0.00097 30.1 4.1 57 151-207 124-190 (239)
27 3lxx_A GTPase IMAP family memb 37.1 30 0.001 29.9 4.1 67 40-106 112-190 (239)
28 1wf3_A GTP-binding protein; GT 36.7 22 0.00076 32.7 3.3 42 41-82 87-134 (301)
29 3def_A T7I23.11 protein; chlor 33.7 55 0.0019 28.9 5.4 38 143-180 116-165 (262)
30 2ged_A SR-beta, signal recogni 26.8 35 0.0012 27.8 2.6 32 165-196 155-186 (193)
31 3r7w_A Gtpase1, GTP-binding pr 26.1 1.2E+02 0.0041 27.6 6.4 45 62-106 112-163 (307)
32 1wb1_A Translation elongation 25.3 1.1E+02 0.0037 30.1 6.3 33 166-198 125-157 (482)
33 2qu8_A Putative nucleolar GTP- 23.9 58 0.002 27.7 3.6 51 55-105 129-185 (228)
34 2ged_A SR-beta, signal recogni 23.5 48 0.0016 26.9 2.9 32 64-95 155-186 (193)
35 3bma_A D-alanyl-lipoteichoic a 23.0 74 0.0025 31.2 4.5 53 56-108 282-340 (407)
36 3s9g_A Protein hexim1; cyclin 21.8 71 0.0024 25.4 3.3 15 287-301 17-31 (104)
37 1wb1_A Translation elongation 21.8 1.1E+02 0.0039 30.0 5.6 48 50-97 109-157 (482)
38 3sjy_A Translation initiation 21.7 99 0.0034 29.3 5.0 33 66-98 130-162 (403)
39 3cnl_A YLQF, putative uncharac 21.4 35 0.0012 30.8 1.7 49 54-108 201-249 (262)
40 3h2y_A GTPase family protein; 20.2 2.1E+02 0.0071 26.9 7.0 40 165-204 95-138 (368)
41 3sjy_A Translation initiation 20.2 97 0.0033 29.4 4.6 32 167-198 130-161 (403)
No 1
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-47 Score=382.85 Aligned_cols=197 Identities=36% Similarity=0.627 Sum_probs=125.0
Q ss_pred eeecceeEEEEEc------ccccchHHHHHHhccccceeeeeecCCCCCHHHHHHHHHHHHHHHHHcCCcccCCCCCCCC
Q psy97 138 EVAGTKVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEENQIQIYQFPECDSD 211 (339)
Q Consensus 138 ~~~D~rvh~~lYf------gl~~lDi~~mk~L~~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~~I~if~f~~~~~~ 211 (339)
...|.+||+|+|| |+++.|+++|+.|+..+|+||||+|+|+||++|+..+++.|+++|..+||.||.|+.+|
T Consensus 142 ~~~d~rVh~~v~fI~d~~~~l~~~Dieilk~L~~~~~vI~Vi~KtD~Lt~~E~~~l~~~I~~~L~~~gi~I~~is~~d-- 219 (427)
T 2qag_B 142 TYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADAISKSELTKFKIKITSELVSNGVQIYQFPTDD-- 219 (427)
T ss_dssp CSCC--CCEEEEEECCCC---CHHHHHHHHHTCSCSEEEEEESCGGGSCHHHHHHHHHHHHHHHBTTBCCCCCCC-----
T ss_pred ccccccccEEEEEEeCCCCCCCHHHHHHHHHHhhCCCEEEEEcchhccchHHHHHHHHHHHHHHHHcCCcEEecCCCc--
Confidence 3578999999998 89999999999999999999999999999999999999999999999999999998532
Q ss_pred cCHHhHHHhHhhhcCCCeEEEecCceEeeCCeeeeeccCCceeeeecCCCCCchHHHHHhhhhhhHHHHHHhhhHHHHHH
Q psy97 212 EDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVRGRQYPWGVVEVENPKHSDFNKLRNMLISTHMQDLKDVTEDVHYEN 291 (339)
Q Consensus 212 ~de~~~~~~~~l~~~~PFaVI~s~~~~~~~g~~~~~R~y~WG~veven~~h~DF~~Lr~~Li~~hl~dLk~~T~~~~YE~ 291 (339)
++..+.+..++..+|||||||+..++.+|+.++||+||||+|+|+|++||||.+||++||++||+||++.|+++|||+
T Consensus 220 --~~~~~~~~~~~~~~PFavvgs~~~~~~~g~~vrgR~ypWG~~even~~h~DF~~Lr~~l~~t~~~dL~~~T~~~~YE~ 297 (427)
T 2qag_B 220 --ESVAEINGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVENEAHCDFVKLREMLIRVNMEDLREQTHTRHYEL 297 (427)
T ss_dssp ----CCSHHHHHTTC-CCBCCC--------CCCC-----CCCCCC-----CCSSHHHHHHHHHTSTTHHHHHHHHHTTHH
T ss_pred --hhHHHHHhhhcCCCCeEEECCCCeeeeCCcEEEEecCCCceEEeCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 223345677889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccCCCC-CCCCCCCC--cccchhHHHHHHhhHHHHhhhhc
Q psy97 292 FRAQCLSQISQRGDRG-KLKKDSAP--DGLITETDRLLLEKDEEVSASIM 338 (339)
Q Consensus 292 yR~~~L~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~el~~~~~ 338 (339)
||+++|..++...... +.+-.+.. ++++++++.+++++|+||+|+|+
T Consensus 298 yR~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~ 347 (427)
T 2qag_B 298 YRRCKLEEMGFKDTDPDSKPFSLQETYEAKRNEFLGELQKKEEEMRQMFV 347 (427)
T ss_dssp HHHHHHHHHC----------------------------------------
T ss_pred HHHHHHhhcCCCcccccccccchhHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 9999999876542221 11111222 67889999999999999999996
No 2
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=100.00 E-value=2.3e-45 Score=346.27 Aligned_cols=171 Identities=43% Similarity=0.711 Sum_probs=149.0
Q ss_pred ccchhhhccceeeeeecceeEEEEEc------ccccchHHHHHHhccccceeeeeecCCCCCHHHHHHHHHHHHHHHHHc
Q psy97 125 SVPFAIIGSNTVIEVAGTKVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEEN 198 (339)
Q Consensus 125 ~lPFAVVgsnrr~~~~D~rvh~~lYf------gl~~lDi~~mk~L~~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~ 198 (339)
.++-...++. +..+.+.|+|+|+|+ |+.++|+++|++|++.+|+||||+|+|++|++|+..+|+.|++.|..+
T Consensus 94 ~~~~~LS~G~-~qrv~iaRal~~lllldep~~gL~~lD~~~l~~L~~~~~vI~Vi~K~D~lt~~e~~~~k~~i~~~l~~~ 172 (270)
T 3sop_A 94 FLKEEVNIAR-KKRIPDTRVHCCLYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEEKSEFKQRVRKELEVN 172 (270)
T ss_dssp HHHHHSCTTC-CSSCCCCSCCEEEEEECCCSSSCCHHHHHHHHHHHTTSEEEEEETTGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred hhHHhcCccc-chhhhhheeeeeeEEEecCCCcCCHHHHHHHHHHHhcCcEEEEEeccccCCHHHHHHHHHHHHHHHHHc
Confidence 3333344443 456789999999999 899999999999999999999999999999999999999999999999
Q ss_pred CCcccCCCCCCCCcCHHhHHHhHhhhcCCCeEEEecCceEeeCCeeeeeccCCceeeeecCCCCCchHHHHHhhhhhhHH
Q psy97 199 QIQIYQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVRGRQYPWGVVEVENPKHSDFNKLRNMLISTHMQ 278 (339)
Q Consensus 199 ~I~if~f~~~~~~~de~~~~~~~~l~~~~PFaVI~s~~~~~~~g~~~~~R~y~WG~veven~~h~DF~~Lr~~Li~~hl~ 278 (339)
||++|+|++.+++ +++..+.....++.+|||||||+..++.+|+.++||+||||+|+|||++||||.+||++||++||+
T Consensus 173 ~i~i~~~~~~~~~-~~~~~~~~~~~~~~~pfavv~s~~~~~~~g~~~~~r~y~wg~~~v~n~~h~df~~lr~~l~~~~~~ 251 (270)
T 3sop_A 173 GIEFYPQKEFDED-LEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVENLNHCEFALLRDFVIRTHLQ 251 (270)
T ss_dssp TCCCSSCSCC----CHHHHHHHHHHHTTCSEECCCCCCEEEETTEEEEEECCCC-CEESSCTTTCSHHHHHHHHHTTTHH
T ss_pred CccccCCCCCCcc-hHHHHHHHHHHhcCCCeEEEecceEEEeCCcEEEEeecCceEEEeCCcccccHHHHHHHHHHHHHH
Confidence 9999999865533 344433334456899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHh
Q psy97 279 DLKDVTEDVHYENFRAQCL 297 (339)
Q Consensus 279 dLk~~T~~~~YE~yR~~~L 297 (339)
|||++|+++|||+||+++|
T Consensus 252 ~l~~~t~~~~ye~~r~~~l 270 (270)
T 3sop_A 252 DLKEVTHNIHYETYRAKRL 270 (270)
T ss_dssp HHHHHHHHTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999986
No 3
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=100.00 E-value=7e-42 Score=341.28 Aligned_cols=198 Identities=48% Similarity=0.839 Sum_probs=121.5
Q ss_pred eeecceeEEEEEc------ccccchHHHHHHhccccceeeeeecCCCCCHHHHHHHHHHHHHHHHHcCCcccCCCCCCCC
Q psy97 138 EVAGTKVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEENQIQIYQFPECDSD 211 (339)
Q Consensus 138 ~~~D~rvh~~lYf------gl~~lDi~~mk~L~~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~~I~if~f~~~~~~ 211 (339)
.+.|.++|+|+|+ |+.++|+++|+.|+..+|+|||++|+|++|+.++..+|+.+++.+..+||++|.|+.++.+
T Consensus 133 l~~d~~~~vlL~ldePt~~~L~~~d~~~lk~L~~~v~iIlVinK~Dll~~~ev~~~k~~i~~~~~~~~i~~~~~sa~~~~ 212 (418)
T 2qag_C 133 QMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPETDDE 212 (418)
T ss_dssp CCCCC-CCEEEEECCC-CCSCCHHHHHHHHHHTTTSEEEEEEESTTSSCHHHHHHHHHHHHHHHHHHTCCCCCCC-----
T ss_pred hccCCCeeEEEEEecCcccCCCHHHHHHHHHHhccCcEEEEEEcccCccHHHHHHHHHHHHHHHHHcCCeEEeCCCCCCc
Confidence 3578999999999 6899999999999999999999999999999999999999999999999999999865433
Q ss_pred cCHHhHHHhHhhhcCCCeEEEecCceEeeCCeeeeeccCCceeeeecCCCCCchHHHHHhhhhhhHHHHHHhhhHHHHHH
Q psy97 212 EDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVRGRQYPWGVVEVENPKHSDFNKLRNMLISTHMQDLKDVTEDVHYEN 291 (339)
Q Consensus 212 ~de~~~~~~~~l~~~~PFaVI~s~~~~~~~g~~~~~R~y~WG~veven~~h~DF~~Lr~~Li~~hl~dLk~~T~~~~YE~ 291 (339)
+.+ +....+...+|||||||+..++.+|+.++||+||||+|+|+|+.||||..||++||++||+||++.|+++|||+
T Consensus 213 ~v~---~~~~~l~~~iPfavv~s~~~~~~~g~~vr~R~y~wg~i~Ven~~h~df~~Lr~~Li~~~~~dl~~~T~~~~Ye~ 289 (418)
T 2qag_C 213 EEN---KLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYEN 289 (418)
T ss_dssp ---------------CCEEECC-------------CEECSSCEECC--CCSSTTTHHHHHHHTTSHHHHHHHHHHHTHHH
T ss_pred CHH---HHHHHHHhhCCcceeecceeEecCCceeecccccceEEEecchhhCCHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 222 24567888999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccCC---C--CCCCCCCCC--cccchhHHHHHHhhHHHHhhhhc
Q psy97 292 FRAQCLSQISQRGD---R--GKLKKDSAP--DGLITETDRLLLEKDEEVSASIM 338 (339)
Q Consensus 292 yR~~~L~~~~~~~~---~--~~~~~~~~~--~~~~~~~~~~~~~~~~el~~~~~ 338 (339)
||+++|..+..... . |+..++|.. ++++++++.++++||+||+|+|+
T Consensus 290 yR~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~f~ 343 (418)
T 2qag_C 290 YRSRKLAAVTYNGVDNNKNKGQLTKSPLAQMEEERREHVAKMKKMEMEMEQVFE 343 (418)
T ss_dssp HHHHHCC-----------------------------------------------
T ss_pred HHHHHHhhccccCccccccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998732111 1 111113444 88899999999999999999996
No 4
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=100.00 E-value=1.5e-38 Score=303.31 Aligned_cols=173 Identities=56% Similarity=0.955 Sum_probs=143.5
Q ss_pred hhhccceeeeeecceeEEEEEc------ccccchHHHHHHhccccceeeeeecCCCCCHHHHHHHHHHHHHHHHHcCCcc
Q psy97 129 AIIGSNTVIEVAGTKVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEENQIQI 202 (339)
Q Consensus 129 AVVgsnrr~~~~D~rvh~~lYf------gl~~lDi~~mk~L~~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~~I~i 202 (339)
...|.. +..+.+.++|+++|+ ||.++++++|++++..+|++||++|+|++|..|+..+|+.+++.++.+|+++
T Consensus 113 ~~sgg~-rqrv~~ara~~ll~ldePt~~~Ld~~~~~~l~~l~~~~~iilV~~K~Dl~~~~e~~~~~~~~~~~~~~~~~~~ 191 (301)
T 2qnr_A 113 DESGLN-RRHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHNIKI 191 (301)
T ss_dssp HHTSSC-CTTCCCCCCCEEEEEECSSSSSCCHHHHHHHHHHTTTSCEEEEECCGGGSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HhCHHh-hhhhhhhhhhheeeeecCcccCCCHHHHHHHHHHHhcCCEEEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeE
Confidence 344544 345789999999999 5999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCcCHHhHHHhHhhhcCCCeEEEecCceEeeCCeeeeeccCCceeeeecCCCCCchHHHHHhhhhhhHHHHHH
Q psy97 203 YQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVRGRQYPWGVVEVENPKHSDFNKLRNMLISTHMQDLKD 282 (339)
Q Consensus 203 f~f~~~~~~~de~~~~~~~~l~~~~PFaVI~s~~~~~~~g~~~~~R~y~WG~veven~~h~DF~~Lr~~Li~~hl~dLk~ 282 (339)
|.++..+.+.++.+....+.+...+|||||||+..++.+|+.++||+||||+|+|+|++||||.+||++|| +||+|||+
T Consensus 192 ~e~Sa~~~~v~e~f~~l~~~i~~~~p~avigs~~~~~~~g~~~~~r~y~wg~~~v~n~~h~df~~lr~~l~-~~~~~l~~ 270 (301)
T 2qnr_A 192 YHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLI-THMQDLQE 270 (301)
T ss_dssp CCCC---------CHHHHHHHHTTCSEECCCCCCBCC-----CBEEEETTEEEETTCTTTCSHHHHHHHHH-HTHHHHHH
T ss_pred EecCCccccccHHHHHHHHHhhcCCCceEECCCceEecCCcEEeeEcCCCceEeeCCCccCcHHHHHHHHH-HHHHHHHH
Confidence 99885444445556667778889999999999999999999999999999999999999999999999999 99999999
Q ss_pred hhhHHHHHHHHHHHhhhcccc
Q psy97 283 VTEDVHYENFRAQCLSQISQR 303 (339)
Q Consensus 283 ~T~~~~YE~yR~~~L~~~~~~ 303 (339)
.|+++|||+||+++|..++.+
T Consensus 271 ~t~~~~ye~~r~~~l~~~~~~ 291 (301)
T 2qnr_A 271 VTQDLHYENFRSERLKRGGRK 291 (301)
T ss_dssp HHHHTHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHhCCCc
Confidence 999999999999999987654
No 5
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=309.24 Aligned_cols=166 Identities=57% Similarity=0.993 Sum_probs=134.7
Q ss_pred eeeecceeEEEEEc------ccccchHHHHHHhccccceeeeeecCCCCCHHHHHHHHHHHHHHHHHcCCcccCCCCCCC
Q psy97 137 IEVAGTKVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEENQIQIYQFPECDS 210 (339)
Q Consensus 137 ~~~~D~rvh~~lYf------gl~~lDi~~mk~L~~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~~I~if~f~~~~~ 210 (339)
..+.|.++|+++|+ ++.++|+++|+.++..+|+|||++|+|+++..++..+|+.+.+.+..+|+++|.++..+.
T Consensus 139 ~~~~d~rv~~~vy~I~~~~~~l~~~d~~~~~~l~~~~piIlV~NK~Dl~~~~ev~~~k~~i~~~~~~~~i~~~~~Sa~~~ 218 (361)
T 2qag_A 139 RHIIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKERERLKKRILDEIEEHNIKIYHLPDAES 218 (361)
T ss_dssp C-CCCCCCCEEEEEECSSSSSCCHHHHHHHHHTCS-SCEEEEEECCSSSCHHHHHHHHHHHHHHTTCC-CCSCCCC----
T ss_pred ccccCCceEEEEEEEecCCCCcchhHHHHHHHhccCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEeCCCcCC
Confidence 35789999999999 688999999999999999999999999999999999999999999999999998875444
Q ss_pred CcCHHhHHHhHhhhcCCCeEEEecCceEeeCCeeeeeccCCceeeeecCCCCCchHHHHHhhhhhhHHHHHHhhhHHHHH
Q psy97 211 DEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVRGRQYPWGVVEVENPKHSDFNKLRNMLISTHMQDLKDVTEDVHYE 290 (339)
Q Consensus 211 ~~de~~~~~~~~l~~~~PFaVI~s~~~~~~~g~~~~~R~y~WG~veven~~h~DF~~Lr~~Li~~hl~dLk~~T~~~~YE 290 (339)
..++.+......+...+|||||||+..++.+|+.++||+||||+|+|+|++||||..||++|| +||+||++.|+++|||
T Consensus 219 ~~~e~~~~l~~~i~~~ip~~vv~s~~~~~~~g~~~~gr~ypwg~~~ven~~h~df~~Lr~~l~-~~~~dl~~~t~~~~ye 297 (361)
T 2qag_A 219 DEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVENPEHNDFLKLRTMLI-THMQDLQEVTQDLHYE 297 (361)
T ss_dssp -----CHHHHHHHHHTCSCEECCCSEEC------CEEECCSSCCEESSCC-CCTHHHHHHHHH-HCCGGGTHHHHTTTHH
T ss_pred CcchhHHHHHHHHHhcCCCCEeCCCCccccCCeEEEEEecCCceEecCCCccCcHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 345556667788899999999999999899999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHhhhcccc
Q psy97 291 NFRAQCLSQISQR 303 (339)
Q Consensus 291 ~yR~~~L~~~~~~ 303 (339)
+||+++|..++..
T Consensus 298 ~yr~~~l~~~~~~ 310 (361)
T 2qag_A 298 NFRSERLKRGGRK 310 (361)
T ss_dssp HHHTTTC------
T ss_pred HHHHHHHHhcCcc
Confidence 9999999987643
No 6
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=100.00 E-value=1e-36 Score=284.89 Aligned_cols=159 Identities=56% Similarity=0.979 Sum_probs=134.5
Q ss_pred eeecceeEEEEEc------ccccchHHHHHHhccccceeeeeecCCCCCHHHHHHHHHHHHHHHHHcCCcccCCCCCCCC
Q psy97 138 EVAGTKVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEENQIQIYQFPECDSD 211 (339)
Q Consensus 138 ~~~D~rvh~~lYf------gl~~lDi~~mk~L~~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~~I~if~f~~~~~~ 211 (339)
.+.|+++|+|+|+ |+.+.|+++|+.|+..+|+|||++|+|+++.+++..+++.+++.+..+++++|.++..+.+
T Consensus 110 ~~~d~r~~~~l~~i~~~~~~~~~~d~~~l~~l~~~~pvi~V~nK~D~~~~~e~~~~~~~i~~~l~~~~i~v~~~sa~~~~ 189 (274)
T 3t5d_A 110 QMPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEECQQFKKQIMKEIQEHKIKIYEFPETDDE 189 (274)
T ss_dssp SCCCCCCCEEEEEECSCCSSCCHHHHHHHHHHTTTSCEEEEESSGGGSCHHHHHHHHHHHHHHHHHTTCCCCCC------
T ss_pred cccCCceeEEEEEecCCCCCCCHHHHHHHHHHhccCCEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCeEEcCCCCCCh
Confidence 6789999999999 6899999999999999999999999999999999999999999999999999999854322
Q ss_pred cCHHhHHHhHhhhcCCCeEEEecCceEeeCCeeeeeccCCceeeeecCCCCCchHHHHHhhhhhhHHHHHHhhhHHHHHH
Q psy97 212 EDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVRGRQYPWGVVEVENPKHSDFNKLRNMLISTHMQDLKDVTEDVHYEN 291 (339)
Q Consensus 212 ~de~~~~~~~~l~~~~PFaVI~s~~~~~~~g~~~~~R~y~WG~veven~~h~DF~~Lr~~Li~~hl~dLk~~T~~~~YE~ 291 (339)
...+..+.+.+.+|||||||+..++.+|+.++||.||||+++|+|+.||||..||++|+++||+||++.|++.|||+
T Consensus 190 ---~~~~l~~~l~~~~p~~vv~s~~~~~~~~~~~~~r~y~wg~~~ve~~~~~df~~lr~~l~~~~~~~l~~~t~~~~ye~ 266 (274)
T 3t5d_A 190 ---EENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCDFTILRNMLIRTHMQDLKDVTNNVHYEN 266 (274)
T ss_dssp --------CHHHHHTCSEECCCCCCC--------CEEECSSCEEESSCTTTCSHHHHHHTTTTTTHHHHHHHHHHTHHHH
T ss_pred ---hHHHHHHHHhcCCCcEEEEeeeEEeeCCeEEEeeecccceEEecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23345567888999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhh
Q psy97 292 FRAQCLSQ 299 (339)
Q Consensus 292 yR~~~L~~ 299 (339)
||+++|++
T Consensus 267 yr~~~l~~ 274 (274)
T 3t5d_A 267 YRSRKLAA 274 (274)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99999974
No 7
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=99.81 E-value=5.6e-20 Score=172.93 Aligned_cols=141 Identities=36% Similarity=0.554 Sum_probs=115.2
Q ss_pred hhhHHh-hhhhhHHHHHHhhhhccccccCCCceEEEEEEEe------ecCcccHHHHHhhcCcceEEeeeeecCCCCHHH
Q psy97 10 IVPLIA-KADTLTSAEVKKLKKKLLEDIEENQIQVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAE 82 (339)
Q Consensus 10 ~~~~i~-~~~~~~~~e~~~~r~~~~~~~~D~rvhv~~~lYf------~L~~~Di~~mk~L~~~vNvIPVIaKaD~lt~~E 82 (339)
+..++. .|.+++.+|.+.-|+.. +.+.|+|+| +|| ||+++|+++|++|+..+|+||||+|+|++|.+|
T Consensus 83 i~~~~~~~~~~~~~~~LS~G~~qr---v~iaRal~~--lllldep~~gL~~lD~~~l~~L~~~~~vI~Vi~K~D~lt~~e 157 (270)
T 3sop_A 83 IEKYINEQYEKFLKEEVNIARKKR---IPDTRVHCC--LYFISPTGHSLRPLDLEFMKHLSKVVNIIPVIAKADTMTLEE 157 (270)
T ss_dssp HHHHHHHHHHHHHHHHSCTTCCSS---CCCCSCCEE--EEEECCCSSSCCHHHHHHHHHHHTTSEEEEEETTGGGSCHHH
T ss_pred HHHHHHHHHHhhhHHhcCcccchh---hhhheeeee--eEEEecCCCcCCHHHHHHHHHHHhcCcEEEEEeccccCCHHH
Confidence 566765 78899988888777664 678998877 666 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCCCCcchHHHHhhhhhhcccchhhhccceeeeeecceeEEEEEc-ccccch
Q psy97 83 VKKLKKKLLEDIEENQIQIYQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVLIIFYF-SLRQID 156 (339)
Q Consensus 83 ~~~~K~~I~~~l~~~~I~if~fp~~~~~~d~~~~~~~~~ik~~lPFAVVgsnrr~~~~D~rvh~~lYf-gl~~lD 156 (339)
+..+|+.|+++|.+++|++|+||..+++ +++....+...++++|||||||+......+..++++.|+ |.-.++
T Consensus 158 ~~~~k~~i~~~l~~~~i~i~~~~~~~~~-~~~~~~~~~~~~~~~pfavv~s~~~~~~~g~~~~~r~y~wg~~~v~ 231 (270)
T 3sop_A 158 KSEFKQRVRKELEVNGIEFYPQKEFDED-LEDKTENDKIRQESMPFAVVGSDKEYQVNGKRVLGRKTPWGIIEVE 231 (270)
T ss_dssp HHHHHHHHHHHHHHTTCCCSSCSCC----CHHHHHHHHHHHTTCSEECCCCCCEEEETTEEEEEECCCC-CEESS
T ss_pred HHHHHHHHHHHHHHcCccccCCCCCCcc-hHHHHHHHHHHhcCCCeEEEecceEEEeCCcEEEEeecCceEEEeC
Confidence 9999999999999999999999876543 334333334446899999999997777778889999999 665543
No 8
>2qag_B Septin-6, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.81 E-value=1.7e-20 Score=187.45 Aligned_cols=142 Identities=32% Similarity=0.535 Sum_probs=98.3
Q ss_pred chhhHHh-hhhhhHHHHHHhhhhccccccCCCceEEEEEEEe----ecCcccHHHHHhhcCcceEEeeeeecCCCCHHHH
Q psy97 9 NIVPLIA-KADTLTSAEVKKLKKKLLEDIEENQIQVLIIFYF----SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEV 83 (339)
Q Consensus 9 ~~~~~i~-~~~~~~~~e~~~~r~~~~~~~~D~rvhv~~~lYf----~L~~~Di~~mk~L~~~vNvIPVIaKaD~lt~~E~ 83 (339)
+|+.||. +|..++.++.++.|+.. .++|.|||||++|.. ++++.|+++|+.|+..+||||||+|+|+||++|+
T Consensus 117 ~i~~~i~~q~~~~L~e~~~i~r~l~--~~~d~rVh~~v~fI~d~~~~l~~~Dieilk~L~~~~~vI~Vi~KtD~Lt~~E~ 194 (427)
T 2qag_B 117 PIVEFIDAQFEAYLQEELKIRRVLH--TYHDSRIHVCLYFIAPTGHSLKSLDLVTMKKLDSKVNIIPIIAKADAISKSEL 194 (427)
T ss_dssp HHHHHHHHHHHHHHHHC--CCCCCC--CSCC--CCEEEEEECCCC---CHHHHHHHHHTCSCSEEEEEESCGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhc--ccccccccEEEEEEeCCCCCCCHHHHHHHHHHhhCCCEEEEEcchhccchHHH
Confidence 3778886 89999999988776532 257888887744443 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCCCCCCCcchHHHHhhhhhhcccchhhhccceeeeeecceeEEEEEc-ccccch
Q psy97 84 KKLKKKLLEDIEENQIQIYQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVLIIFYF-SLRQID 156 (339)
Q Consensus 84 ~~~K~~I~~~l~~~~I~if~fp~~~~~~d~~~~~~~~~ik~~lPFAVVgsnrr~~~~D~rvh~~lYf-gl~~lD 156 (339)
..+++.|+++|..+||.||.|+..+ ++..+.+..+++.+|||||||+......+..|+++.|+ |.-.++
T Consensus 195 ~~l~~~I~~~L~~~gi~I~~is~~d----~~~~~~~~~~~~~~PFavvgs~~~~~~~g~~vrgR~ypWG~~eve 264 (427)
T 2qag_B 195 TKFKIKITSELVSNGVQIYQFPTDD----ESVAEINGTMNAHLPFAVIGSTEELKIGNKMMRARQYPWGTVQVE 264 (427)
T ss_dssp HHHHHHHHHHHBTTBCCCCCCC---------CCSHHHHHTTC-CCBCCC--------CCCC-----CCCCCC--
T ss_pred HHHHHHHHHHHHHcCCcEEecCCCc----hhHHHHHhhhcCCCCeEEECCCCeeeeCCcEEEEecCCCceEEeC
Confidence 9999999999999999999998532 23334567789999999999997777778889999999 765544
No 9
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=99.72 E-value=1.1e-17 Score=155.89 Aligned_cols=165 Identities=37% Similarity=0.626 Sum_probs=121.1
Q ss_pred chhhHHh-hhhhhHHHHHHhhhhccccccCCCceEEEEEEEe----ecCcccHHHHHhhcCcceEEeeeeecCCCCHHHH
Q psy97 9 NIVPLIA-KADTLTSAEVKKLKKKLLEDIEENQIQVLIIFYF----SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAEV 83 (339)
Q Consensus 9 ~~~~~i~-~~~~~~~~e~~~~r~~~~~~~~D~rvhv~~~lYf----~L~~~Di~~mk~L~~~vNvIPVIaKaD~lt~~E~ 83 (339)
+++.||. +|++|+.+|..+.|.. +.|+|+|+++++.- ++++.|+++|+.|+..+|+|||++|+|+++.+++
T Consensus 87 ~i~~~i~~~~~~~l~~~~~~~r~~----~~d~r~~~~l~~i~~~~~~~~~~d~~~l~~l~~~~pvi~V~nK~D~~~~~e~ 162 (274)
T 3t5d_A 87 PVIDYIDSKFEDYLNAESRVNRRQ----MPDNRVQCCLYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEEC 162 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCS----CCCCCCCEEEEEECSCCSSCCHHHHHHHHHHTTTSCEEEEESSGGGSCHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccccc----ccCCceeEEEEEecCCCCCCCHHHHHHHHHHhccCCEEEEEeccCCCCHHHH
Confidence 4788986 8999999999999884 68899888755543 7899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCCCCCCCcchHHHHhhhhhhcccchhhhccceeeeeecceeEEEEEc-ccccc------h
Q psy97 84 KKLKKKLLEDIEENQIQIYQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVLIIFYF-SLRQI------D 156 (339)
Q Consensus 84 ~~~K~~I~~~l~~~~I~if~fp~~~~~~d~~~~~~~~~ik~~lPFAVVgsnrr~~~~D~rvh~~lYf-gl~~l------D 156 (339)
..+++.|++.+..++|++|.++..+.++ ..+....+.+.+|||||||+......+.+++++.|+ |.-++ |
T Consensus 163 ~~~~~~i~~~l~~~~i~v~~~sa~~~~~---~~~l~~~l~~~~p~~vv~s~~~~~~~~~~~~~r~y~wg~~~ve~~~~~d 239 (274)
T 3t5d_A 163 QQFKKQIMKEIQEHKIKIYEFPETDDEE---ENKLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEVENGEHCD 239 (274)
T ss_dssp HHHHHHHHHHHHHTTCCCCCC--------------CHHHHHTCSEECCCCCCC--------CEEECSSCEEESSCTTTCS
T ss_pred HHHHHHHHHHHHHcCCeEEcCCCCCChh---HHHHHHHHhcCCCcEEEEeeeEEeeCCeEEEeeecccceEEecCccccc
Confidence 9999999999999999999998643322 234567788999999999997777788999999999 64333 5
Q ss_pred HHHHHHhccccceeeeeecCCCCCHHHHHHHHHHHHHHH
Q psy97 157 IETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDI 195 (339)
Q Consensus 157 i~~mk~L~~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l 195 (339)
...++. .|-.+.++.+|....+.+
T Consensus 240 f~~lr~---------------~l~~~~~~~l~~~t~~~~ 263 (274)
T 3t5d_A 240 FTILRN---------------MLIRTHMQDLKDVTNNVH 263 (274)
T ss_dssp HHHHHH---------------TTTTTTHHHHHHHHHHTH
T ss_pred HHHHHH---------------HHHHHHHHHHHHHHHHHH
Confidence 555664 344456666665554443
No 10
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.60 E-value=8e-16 Score=149.90 Aligned_cols=144 Identities=41% Similarity=0.689 Sum_probs=110.0
Q ss_pred cchhhHHh-hhhhhHHHHHHhhhhccccccCCCceEEEEEEEe----ecCcccHHHHHhhcCcceEEeeeeecCCCCHHH
Q psy97 8 VNIVPLIA-KADTLTSAEVKKLKKKLLEDIEENQIQVLIIFYF----SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAE 82 (339)
Q Consensus 8 ~~~~~~i~-~~~~~~~~e~~~~r~~~~~~~~D~rvhv~~~lYf----~L~~~Di~~mk~L~~~vNvIPVIaKaD~lt~~E 82 (339)
-+++.||. .|+.|+.++..+.|.. +.|+|+||++++.- ++.++|+++|+.|+..+|+|||++|+|+++..+
T Consensus 116 ~~i~~~i~~~~~~yl~~~~~~~r~~----~~d~rv~~~vy~I~~~~~~l~~~d~~~~~~l~~~~piIlV~NK~Dl~~~~e 191 (361)
T 2qag_A 116 KTIISYIDEQFERYLHDESGLNRRH----IIDNRVHCCFYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLKE 191 (361)
T ss_dssp CCTHHHHHHHHHHHHHHHTCSCCC-----CCCCCCCEEEEEECSSSSSCCHHHHHHHHHTCS-SCEEEEEECCSSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhhcccc----ccCCceEEEEEEEecCCCCcchhHHHHHHHhccCCCEEEEEECCCCCCHHH
Confidence 45888996 8999999999998853 68898887744432 789999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCCCCcchHHHHhhhhhhcccchhhhccceeeeeecceeEEEEEc-ccccc
Q psy97 83 VKKLKKKLLEDIEENQIQIYQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVLIIFYF-SLRQI 155 (339)
Q Consensus 83 ~~~~K~~I~~~l~~~~I~if~fp~~~~~~d~~~~~~~~~ik~~lPFAVVgsnrr~~~~D~rvh~~lYf-gl~~l 155 (339)
+..+|..+.+.++.+++++|.++..+..+++.+......+...+||||+|++......+..+.++.|+ |.-.+
T Consensus 192 v~~~k~~i~~~~~~~~i~~~~~Sa~~~~~~e~~~~l~~~i~~~ip~~vv~s~~~~~~~g~~~~gr~ypwg~~~v 265 (361)
T 2qag_A 192 RERLKKRILDEIEEHNIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEV 265 (361)
T ss_dssp HHHHHHHHHHHTTCC-CCSCCCC---------CHHHHHHHHHTCSCEECCCSEEC------CEEECCSSCCEES
T ss_pred HHHHHHHHHHHHHHCCCCEEeCCCcCCCcchhHHHHHHHHHhcCCCCEeCCCCccccCCeEEEEEecCCceEec
Confidence 99999999999999999999988644434455566777888999999999997667778889999999 65443
No 11
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=99.57 E-value=1.3e-15 Score=151.93 Aligned_cols=137 Identities=42% Similarity=0.756 Sum_probs=90.4
Q ss_pred hhhHHh-hhhhhHHHHHHhhhhccccccCCCceEEEEEEEe------ecCcccHHHHHhhcCcceEEeeeeecCCCCHHH
Q psy97 10 IVPLIA-KADTLTSAEVKKLKKKLLEDIEENQIQVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSAE 82 (339)
Q Consensus 10 ~~~~i~-~~~~~~~~e~~~~r~~~~~~~~D~rvhv~~~lYf------~L~~~Di~~mk~L~~~vNvIPVIaKaD~lt~~E 82 (339)
++.||. .|+.|+.++..+.|.. +.|.++||| +|+ ||.+.|+++|+.|+..+|+|||++|+|+++..+
T Consensus 111 i~~~i~~~~~~~l~qr~~IaRal----~~d~~~~vl--L~ldePt~~~L~~~d~~~lk~L~~~v~iIlVinK~Dll~~~e 184 (418)
T 2qag_C 111 VIDYIDSKFEDYLNAESRVNRRQ----MPDNRVQCC--LYFIAPSGHGLKPLDIEFMKRLHEKVNIIPLIAKADTLTPEE 184 (418)
T ss_dssp HHHHHHHHHHHHTTTSCC-CCCC----CCCC-CCEE--EEECCC-CCSCCHHHHHHHHHHTTTSEEEEEEESTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----ccCCCeeEE--EEEecCcccCCCHHHHHHHHHHhccCcEEEEEEcccCccHHH
Confidence 667775 6888887776666664 466766655 776 689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccccCCCCCCCcchHHHHhhhhhhcccchhhhccceeeeeecceeEEEEEc-ccccc
Q psy97 83 VKKLKKKLLEDIEENQIQIYQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVLIIFYF-SLRQI 155 (339)
Q Consensus 83 ~~~~K~~I~~~l~~~~I~if~fp~~~~~~d~~~~~~~~~ik~~lPFAVVgsnrr~~~~D~rvh~~lYf-gl~~l 155 (339)
+..+|+.|++.+..++|.+|.||..+.++.+ .....+.+.+||||+|++......+..++++.|+ |.-.+
T Consensus 185 v~~~k~~i~~~~~~~~i~~~~~sa~~~~~v~---~~~~~l~~~iPfavv~s~~~~~~~g~~vr~R~y~wg~i~V 255 (418)
T 2qag_C 185 CQQFKKQIMKEIQEHKIKIYEFPETDDEEEN---KLVKKIKDRLPLAVVGSNTIIEVNGKRVRGRQYPWGVAEV 255 (418)
T ss_dssp HHHHHHHHHHHHHHHTCCCCCCC--------------------CCEEECC-------------CEECSSCEECC
T ss_pred HHHHHHHHHHHHHHcCCeEEeCCCCCCcCHH---HHHHHHHhhCCcceeecceeEecCCceeecccccceEEEe
Confidence 9999999999999999999999865432222 2456788999999999997666666679999999 54443
No 12
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=99.54 E-value=1.7e-14 Score=137.08 Aligned_cols=142 Identities=43% Similarity=0.751 Sum_probs=111.1
Q ss_pred chhhHHh-hhhhhHHHHHHhhhhccccccCCCceEEEEEEEe------ecCcccHHHHHhhcCcceEEeeeeecCCCCHH
Q psy97 9 NIVPLIA-KADTLTSAEVKKLKKKLLEDIEENQIQVLIIFYF------SLRQIDIETMRRLHHKVNIVPLIAKADTLTSA 81 (339)
Q Consensus 9 ~~~~~i~-~~~~~~~~e~~~~r~~~~~~~~D~rvhv~~~lYf------~L~~~Di~~mk~L~~~vNvIPVIaKaD~lt~~ 81 (339)
.++.+|. .++.|+.+++...|.. +.|.|+|++ +|+ ||.+.|+++|++++..+|++||++|+|+++..
T Consensus 98 ~l~~~l~~~~~~~~~~~sgg~rqr----v~~ara~~l--l~ldePt~~~Ld~~~~~~l~~l~~~~~iilV~~K~Dl~~~~ 171 (301)
T 2qnr_A 98 TIISYIDEQFERYLHDESGLNRRH----IIDNRVHCC--FYFISPFGHGLKPLDVAFMKAIHNKVNIVPVIAKADTLTLK 171 (301)
T ss_dssp THHHHHHHHHHHHHHHHTSSCCTT----CCCCCCCEE--EEEECSSSSSCCHHHHHHHHHHTTTSCEEEEECCGGGSCHH
T ss_pred HHHHHHHHHHHHHHHHhCHHhhhh----hhhhhhhhe--eeeecCcccCCCHHHHHHHHHHHhcCCEEEEEEeCCCCCHH
Confidence 4677775 7889999999888865 578988864 666 59999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccccCCCCCCCcchHHHHhhhhhhcccchhhhccceeeeeecceeEEEEEc-ccccch
Q psy97 82 EVKKLKKKLLEDIEENQIQIYQFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIEVAGTKVLIIFYF-SLRQID 156 (339)
Q Consensus 82 E~~~~K~~I~~~l~~~~I~if~fp~~~~~~d~~~~~~~~~ik~~lPFAVVgsnrr~~~~D~rvh~~lYf-gl~~lD 156 (339)
|+..+|+.+++.++.++|.+|.++..+.+.++.+....+.+...+|||||||+......+..++++.|+ |.-.++
T Consensus 172 e~~~~~~~~~~~~~~~~~~~~e~Sa~~~~v~e~f~~l~~~i~~~~p~avigs~~~~~~~g~~~~~r~y~wg~~~v~ 247 (301)
T 2qnr_A 172 ERERLKKRILDEIEEHNIKIYHLPDAESDEDEDFKEQTRLLKASIPFSVVGSNQLIEAKGKKVRGRLYPWGVVEVE 247 (301)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCCCC---------CHHHHHHHHTTCSEECCCCCCBCC-----CBEEEETTEEEETT
T ss_pred HHHHHHHHHHHHHHHcCCeEEecCCccccccHHHHHHHHHhhcCCCceEECCCceEecCCcEEeeEcCCCceEeeC
Confidence 999999999999999999999998654444455556677888999999999997767777789999999 655543
No 13
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=98.12 E-value=1.7e-06 Score=79.73 Aligned_cols=98 Identities=10% Similarity=0.163 Sum_probs=68.3
Q ss_pred cceeEEEEEc------ccccchHHHHHHhccc------cceeeeeecCCCCCHH--HHHHHHHHHHHHHHH---cCCccc
Q psy97 141 GTKVLIIFYF------SLRQIDIETMRRLHHK------VNIVPLIAKADTLTSA--EVKKLKKKLLEDIEE---NQIQIY 203 (339)
Q Consensus 141 D~rvh~~lYf------gl~~lDi~~mk~L~~~------vNvIPVIaKaD~LT~~--El~~~K~~I~~~l~~---~~I~if 203 (339)
+...|+++|+ ++.+.|.++++.+... +++|+|++|+|+.+++ ++..+++.+...+.+ .+..+.
T Consensus 117 ~~~~d~il~v~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~iivV~nK~Dl~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 196 (270)
T 1h65_A 117 DKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLK 196 (270)
T ss_dssp TCEECEEEEEEESSCCCCCHHHHHHHHHHHHHHCGGGGGGEEEEEECCSCCCGGGCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCCEEEEEEeCCCCcCCHHHHHHHHHHHHHhCcccccCEEEEEECcccCCcCCCCHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3467888888 4566777788877643 6899999999988776 567776666665543 233332
Q ss_pred CCCCCCCCcCHHhHHHhHhhhcCCCeEEEecCceE--eeCCeeeeeccCCcee
Q psy97 204 QFPECDSDEDEDFKQQDKELKESVPFAIIGSNTVI--EVAGTKVRGRQYPWGV 254 (339)
Q Consensus 204 ~f~~~~~~~de~~~~~~~~l~~~~PFaVI~s~~~~--~~~g~~~~~R~y~WG~ 254 (339)
... -...+||+++++.... ...|+.+++|.||||.
T Consensus 197 ~~~----------------~~~~~p~~~v~~~~~~~~~~~~~~v~~~~~~w~~ 233 (270)
T 1h65_A 197 KDA----------------QASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIP 233 (270)
T ss_dssp TTS----------------GGGCCCEEECCCCTTCCBCTTSCBBCTTSCBHHH
T ss_pred hhh----------------hhccCCEEEEeCCCcccccCCCceECCCCCCcHH
Confidence 110 0346899999987543 2357889999999997
No 14
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=96.09 E-value=0.0085 Score=56.37 Aligned_cols=131 Identities=22% Similarity=0.232 Sum_probs=79.8
Q ss_pred eEEEEEc-----ccccchHHHHHHhcc---ccceeeeeecCCCCCHHH-HHHHHHH--------------------HHHH
Q psy97 144 VLIIFYF-----SLRQIDIETMRRLHH---KVNIVPLIAKADTLTSAE-VKKLKKK--------------------LLED 194 (339)
Q Consensus 144 vh~~lYf-----gl~~lDi~~mk~L~~---~vNvIPVIaKaD~LT~~E-l~~~K~~--------------------I~~~ 194 (339)
.+++++. ++.+.|..+++.+.. .+++|.|++|+|..+..+ +...-+. +.+.
T Consensus 87 ad~il~VvD~~~~~~~~~~~i~~~l~~~~~~~p~ilV~NK~Dl~~~~~~~~~~~~~~~~~~~~~~iSA~~g~gv~~l~~~ 166 (301)
T 1wf3_A 87 VNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKAD 166 (301)
T ss_dssp CSEEEEEEETTSCCCHHHHHHHHHHGGGTTTSCEEEEEECGGGCSSHHHHHHHHHHTSTTSEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEEEECCCCCChHHHHHHHHHHhhcCCCCEEEEEECcccCCchHHHHHHHHHhcCcCcEEEEeCCCCCCHHHHHHH
Confidence 3455555 456667666677765 589999999999987655 3222111 1122
Q ss_pred HHHc---CCcccCCCCC-C-CCcCHHhH--HH-----hHhhhcCCCeEEEecCceEeeCCeeeeeccCCceeeeecCCCC
Q psy97 195 IEEN---QIQIYQFPEC-D-SDEDEDFK--QQ-----DKELKESVPFAIIGSNTVIEVAGTKVRGRQYPWGVVEVENPKH 262 (339)
Q Consensus 195 l~~~---~I~if~f~~~-~-~~~de~~~--~~-----~~~l~~~~PFaVI~s~~~~~~~g~~~~~R~y~WG~veven~~h 262 (339)
|... +... ||.. . .+..+.+. +. ...+.+.+||+|..+...++..+. |+.|.||++.||++.|
T Consensus 167 l~~~l~~~~~~--y~~~~~~td~~~~~~~~e~~Re~~~~~l~~eiP~~~~v~i~~~~~~~~---~~~~i~~~i~ve~~~~ 241 (301)
T 1wf3_A 167 LLALMPEGPFF--YPEDYAKSDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAEREN---GVLYIKAILYVERPSQ 241 (301)
T ss_dssp HHTTCCBCCCS--SCTTCCSBSSCHHHHHHHHHHHHHHHTCCTTHHHHCEEEEEEEEEETT---TEEEEEEEEEESSHHH
T ss_pred HHHhcccCCCC--CCcccccCCCCHHHHHHHHHHHHHHHHhhcccCceEEEEEEEEEecCC---CeEEEEEEEEEeeCCc
Confidence 2211 1222 3321 1 22223221 11 134568899999988877765332 7889999999999988
Q ss_pred CchHHHHHhhhhhhHHHHHHhhh
Q psy97 263 SDFNKLRNMLISTHMQDLKDVTE 285 (339)
Q Consensus 263 ~DF~~Lr~~Li~~hl~dLk~~T~ 285 (339)
+ .+++|..-.-||..-.
T Consensus 242 k------~iiig~~g~~lk~i~~ 258 (301)
T 1wf3_A 242 K------AIVIGEGGRKIKEIGQ 258 (301)
T ss_dssp H------HHHHCGGGHHHHHHHH
T ss_pred e------EEEEeCCchHHHHHHH
Confidence 6 5568877777776653
No 15
>1h65_A Chloroplast outer envelope protein OEP34; GTPase, translocon; HET: GDP; 2.0A {Pisum sativum} SCOP: c.37.1.8 PDB: 3bb1_A*
Probab=95.51 E-value=0.014 Score=53.40 Aligned_cols=96 Identities=13% Similarity=0.111 Sum_probs=59.2
Q ss_pred CceEEEEEEEe----ecCcccHHHHHhhcCc------ceEEeeeeecCCCCHH--HHHHHHHHHHHHHHh---ccccccc
Q psy97 39 NQIQVLIIFYF----SLRQIDIETMRRLHHK------VNIVPLIAKADTLTSA--EVKKLKKKLLEDIEE---NQIQIYQ 103 (339)
Q Consensus 39 ~rvhv~~~lYf----~L~~~Di~~mk~L~~~------vNvIPVIaKaD~lt~~--E~~~~K~~I~~~l~~---~~I~if~ 103 (339)
.++|+++++|= ++.+.|.++++.|... +++|+|+.|+|..+++ ++..++..+...+++ ++..+..
T Consensus 118 ~~~d~il~v~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~iivV~nK~Dl~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (270)
T 1h65_A 118 KTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKK 197 (270)
T ss_dssp CEECEEEEEEESSCCCCCHHHHHHHHHHHHHHCGGGGGGEEEEEECCSCCCGGGCCHHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred CCCCEEEEEEeCCCCcCCHHHHHHHHHHHHHhCcccccCEEEEEECcccCCcCCCCHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 45566544431 5667888899888654 6899999999988766 567777666666654 2333221
Q ss_pred CCCCCCCcchHHHHhhhhhhcccchhhhccceeee--eecceeEEEEEc
Q psy97 104 FPECDSDEDEDFKQQDKELKESVPFAIIGSNTVIE--VAGTKVLIIFYF 150 (339)
Q Consensus 104 fp~~~~~~d~~~~~~~~~ik~~lPFAVVgsnrr~~--~~D~rvh~~lYf 150 (339)
. .. ...+||+++++..+.. ..+.++..+-|+
T Consensus 198 ~--------------~~--~~~~p~~~v~~~~~~~~~~~~~~v~~~~~~ 230 (270)
T 1h65_A 198 D--------------AQ--ASDIPVVLIENSGRCNKNDSDEKVLPNGIA 230 (270)
T ss_dssp T--------------SG--GGCCCEEECCCCTTCCBCTTSCBBCTTSCB
T ss_pred h--------------hh--hccCCEEEEeCCCcccccCCCceECCCCCC
Confidence 1 00 3568999998864321 223344444455
No 16
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=87.46 E-value=1.2 Score=38.07 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=44.3
Q ss_pred ecCcccHHHHHhhc-CcceEEeeeeecCCCCHHHHHHHHHHHHHHHHh-------cccccccCC
Q psy97 50 SLRQIDIETMRRLH-HKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEE-------NQIQIYQFP 105 (339)
Q Consensus 50 ~L~~~Di~~mk~L~-~~vNvIPVIaKaD~lt~~E~~~~K~~I~~~l~~-------~~I~if~fp 105 (339)
++...+..+++.+. ..+.+|.|+.|+|.+...+.......+.+.+.. .++.+|...
T Consensus 128 ~~~~~~~~~~~~l~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~S 191 (223)
T 4dhe_A 128 PLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDAYRDAGYAGKLTVQLFS 191 (223)
T ss_dssp CCCHHHHHHHHHHGGGCCCEEEEEECGGGSCHHHHHHHHHHHHHHHHHHHHHTCCSCEEEEEEB
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeccccCChhhHHHHHHHHHHHHHhhhhcccCCCCeEEEee
Confidence 56778888888776 467899999999999999988888888887776 456666543
No 17
>4dhe_A Probable GTP-binding protein ENGB; melioidosis, RAS-like GTPase, cell division, cell cycle, SEP GTP-binding; 2.20A {Burkholderia thailandensis}
Probab=84.60 E-value=2.1 Score=36.57 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=37.6
Q ss_pred ccccchHHHHHHhcc-ccceeeeeecCCCCCHHHHHHHHHHHHHHHHH
Q psy97 151 SLRQIDIETMRRLHH-KVNIVPLIAKADTLTSAEVKKLKKKLLEDIEE 197 (339)
Q Consensus 151 gl~~lDi~~mk~L~~-~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~ 197 (339)
++...+..+++.+.. .+++|.|++|+|.+...+.......+.+.+..
T Consensus 128 ~~~~~~~~~~~~l~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~l~~ 175 (223)
T 4dhe_A 128 PLTELDRRMIEWFAPTGKPIHSLLTKCDKLTRQESINALRATQKSLDA 175 (223)
T ss_dssp CCCHHHHHHHHHHGGGCCCEEEEEECGGGSCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeccccCChhhHHHHHHHHHHHHHh
Confidence 566777777777753 67899999999999999988877777777765
No 18
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=80.38 E-value=2.2 Score=35.10 Aligned_cols=56 Identities=11% Similarity=0.149 Sum_probs=41.4
Q ss_pred ecCcccHHHHHhhcC-cceEEeeeeecCCCCHHHHHHHHHHHHHHHHh-cccccccCC
Q psy97 50 SLRQIDIETMRRLHH-KVNIVPLIAKADTLTSAEVKKLKKKLLEDIEE-NQIQIYQFP 105 (339)
Q Consensus 50 ~L~~~Di~~mk~L~~-~vNvIPVIaKaD~lt~~E~~~~K~~I~~~l~~-~~I~if~fp 105 (339)
+....+...++.+.. .+.+|.|+.|+|..+.+++......+.+.+.. +++.+|...
T Consensus 117 ~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 174 (195)
T 3pqc_A 117 PPQDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTS 174 (195)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECGGGSCGGGHHHHHHHHHHHHHSSCCSCEEECC
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEEChhcCChHHHHHHHHHHHHHHhhcCCCceEEEe
Confidence 445555655555543 57899999999999999998888888888876 446777554
No 19
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=79.10 E-value=2.7 Score=34.82 Aligned_cols=56 Identities=14% Similarity=0.217 Sum_probs=40.8
Q ss_pred ecCcccHHHHHhhc-CcceEEeeeeecCCCCHHHHHHHHHHHHHHHHh-cccccccCC
Q psy97 50 SLRQIDIETMRRLH-HKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEE-NQIQIYQFP 105 (339)
Q Consensus 50 ~L~~~Di~~mk~L~-~~vNvIPVIaKaD~lt~~E~~~~K~~I~~~l~~-~~I~if~fp 105 (339)
+.+..+.++++.+. ..+.+|.|+.|+|.....+.......+.+.+.. .++.+|...
T Consensus 118 ~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 175 (195)
T 1svi_A 118 APSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFS 175 (195)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECGGGSCGGGHHHHHHHHHHHHTCCTTSEEEECC
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEECcccCChHHHHHHHHHHHHHHcccCCCceEEEE
Confidence 45666776666665 568899999999999988887777777776653 356666543
No 20
>1svi_A GTP-binding protein YSXC; ENGB, GTPase, GDP, hydrolase; HET: GDP; 1.95A {Bacillus subtilis} SCOP: c.37.1.8 PDB: 1sul_A* 1svw_A*
Probab=73.21 E-value=3.7 Score=33.99 Aligned_cols=62 Identities=13% Similarity=0.202 Sum_probs=41.7
Q ss_pred eEEEEEc-----ccccchHHHHHHhc-cccceeeeeecCCCCCHHHHHHHHHHHHHHHHH-cCCcccCC
Q psy97 144 VLIIFYF-----SLRQIDIETMRRLH-HKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEE-NQIQIYQF 205 (339)
Q Consensus 144 vh~~lYf-----gl~~lDi~~mk~L~-~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~-~~I~if~f 205 (339)
.++.++. +....+..+++.+. ..++++.|++|+|.....+.....+.+.+.+.. .++++|..
T Consensus 106 ~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (195)
T 1svi_A 106 LKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILF 174 (195)
T ss_dssp EEEEEEEEETTSCCCHHHHHHHHHHHHTTCCEEEEEECGGGSCGGGHHHHHHHHHHHHTCCTTSEEEEC
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHHHHcCCCEEEEEECcccCChHHHHHHHHHHHHHHcccCCCceEEE
Confidence 3455554 45556666666554 468899999999999988887766777666653 34555543
No 21
>3pqc_A Probable GTP-binding protein ENGB; rossmann fold, GTPase, cell cycle, hydrolase; HET: GDP; 1.90A {Thermotoga maritima} PDB: 3pr1_A
Probab=72.59 E-value=4.3 Score=33.29 Aligned_cols=55 Identities=11% Similarity=0.138 Sum_probs=38.3
Q ss_pred ccccchHHHHHHhcc-ccceeeeeecCCCCCHHHHHHHHHHHHHHHHHc-CCcccCC
Q psy97 151 SLRQIDIETMRRLHH-KVNIVPLIAKADTLTSAEVKKLKKKLLEDIEEN-QIQIYQF 205 (339)
Q Consensus 151 gl~~lDi~~mk~L~~-~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~-~I~if~f 205 (339)
+....+...++.+.. .++++.|++|+|..+.++.....+.+.+.+... ++++|..
T Consensus 117 ~~~~~~~~~~~~~~~~~~p~i~v~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (195)
T 3pqc_A 117 PPQDSDLMMVEWMKSLNIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPT 173 (195)
T ss_dssp CCCHHHHHHHHHHHHTTCCEEEEEECGGGSCGGGHHHHHHHHHHHHHSSCCSCEEEC
T ss_pred CCCHHHHHHHHHHHHcCCCEEEEEEChhcCChHHHHHHHHHHHHHHhhcCCCceEEE
Confidence 344445544444443 578999999999999888888888887777663 3566644
No 22
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=56.87 E-value=12 Score=37.89 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=34.9
Q ss_pred ecCcccHHHHHhhcC-cceEEeeeeecCCCCHHHHHHHHHHHH
Q psy97 50 SLRQIDIETMRRLHH-KVNIVPLIAKADTLTSAEVKKLKKKLL 91 (339)
Q Consensus 50 ~L~~~Di~~mk~L~~-~vNvIPVIaKaD~lt~~E~~~~K~~I~ 91 (339)
++.+.+..+++.|.. ...+|.|+.|+|.++.+++......++
T Consensus 202 ~~~~~~~~~l~~l~~~~~pvilVlNK~Dl~~~~el~~~~~~l~ 244 (550)
T 2qpt_A 202 EISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALM 244 (550)
T ss_dssp CCCHHHHHHHHHTTTCGGGEEEEEECGGGSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEECCCccCHHHHHHHHHHhh
Confidence 466777888888875 478999999999999999988877776
No 23
>1nrj_B SR-beta, signal recognition particle receptor beta subunit; transmembrane, endoplasmic reticulum, GTP-binding; HET: GTP; 1.70A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=53.30 E-value=1.8 Score=36.96 Aligned_cols=77 Identities=16% Similarity=0.216 Sum_probs=35.1
Q ss_pred cccceeeeeecCCCCCHHHHHHHHHHHHHHHH----HcCCcccCCCCCCCCcCHHhHHHhHhhhcCCCeEE-EecCceEe
Q psy97 165 HKVNIVPLIAKADTLTSAEVKKLKKKLLEDIE----ENQIQIYQFPECDSDEDEDFKQQDKELKESVPFAI-IGSNTVIE 239 (339)
Q Consensus 165 ~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~----~~~I~if~f~~~~~~~de~~~~~~~~l~~~~PFaV-I~s~~~~~ 239 (339)
..+.++.|.+|+|.....+...+++.+.+++. ..++.+|.....+. .+++.......+....+|+. +.++.+..
T Consensus 119 ~~~p~ilv~nK~Dl~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Sa~~~-~~~~~~~~~~~l~~~~~f~~~~~~~~v~~ 197 (218)
T 1nrj_B 119 NGIDILIACNKSELFTARPPSKIKDALESEIQKVIERRKKSLNEVERKIN-EEDYAENTLDVLQSTDGFKFANLEASVVA 197 (218)
T ss_dssp TCCCEEEEEECTTSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------CTTC----CCCGGGSSSCEEE
T ss_pred CCCCEEEEEEchHhcccCCHHHHHHHHHHHHHHHHHHHhccccccccccc-cccchhhhcccccCCCCccccccCCceEE
Confidence 46789999999999887666655555544433 34566664432211 11222222233444466665 43333333
Q ss_pred eCC
Q psy97 240 VAG 242 (339)
Q Consensus 240 ~~g 242 (339)
..|
T Consensus 198 ~~~ 200 (218)
T 1nrj_B 198 FEG 200 (218)
T ss_dssp EEC
T ss_pred Eec
Confidence 333
No 24
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=51.37 E-value=18 Score=36.54 Aligned_cols=43 Identities=16% Similarity=0.194 Sum_probs=34.2
Q ss_pred ccccchHHHHHHhcc-ccceeeeeecCCCCCHHHHHHHHHHHHH
Q psy97 151 SLRQIDIETMRRLHH-KVNIVPLIAKADTLTSAEVKKLKKKLLE 193 (339)
Q Consensus 151 gl~~lDi~~mk~L~~-~vNvIPVIaKaD~LT~~El~~~K~~I~~ 193 (339)
++.+.+...++.+.. ..+++.|++|+|.++.+++......++-
T Consensus 202 ~~~~~~~~~l~~l~~~~~pvilVlNK~Dl~~~~el~~~~~~l~~ 245 (550)
T 2qpt_A 202 EISDEFSEAIGALRGHEDKIRVVLNKADMVETQQLMRVYGALMW 245 (550)
T ss_dssp CCCHHHHHHHHHTTTCGGGEEEEEECGGGSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEECCCccCHHHHHHHHHHhhc
Confidence 355666777888875 3789999999999999999888777763
No 25
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=38.40 E-value=39 Score=29.91 Aligned_cols=30 Identities=7% Similarity=0.206 Sum_probs=21.9
Q ss_pred ecCcccHHHHHhhcCc------ceEEeeeeecCCCC
Q psy97 50 SLRQIDIETMRRLHHK------VNIVPLIAKADTLT 79 (339)
Q Consensus 50 ~L~~~Di~~mk~L~~~------vNvIPVIaKaD~lt 79 (339)
++...|..+++.|... .++|.|+.|+|...
T Consensus 130 ~~~~~~~~~~~~l~~~~~~~~~~~~ivv~nK~Dl~~ 165 (262)
T 3def_A 130 AVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSP 165 (262)
T ss_dssp CCCHHHHHHHHHHHHHHCGGGGGGEEEEEECTTCCC
T ss_pred CCCHHHHHHHHHHHHHhchhhhcCEEEEEeCcccCC
Confidence 4455677777777653 37899999999853
No 26
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=38.05 E-value=28 Score=30.09 Aligned_cols=57 Identities=4% Similarity=0.124 Sum_probs=31.5
Q ss_pred ccccchHHHHHHhc------cccceeeeeecCCCCCHHHHHHHH----HHHHHHHHHcCCcccCCCC
Q psy97 151 SLRQIDIETMRRLH------HKVNIVPLIAKADTLTSAEVKKLK----KKLLEDIEENQIQIYQFPE 207 (339)
Q Consensus 151 gl~~lDi~~mk~L~------~~vNvIPVIaKaD~LT~~El~~~K----~~I~~~l~~~~I~if~f~~ 207 (339)
++...+...+..+. ...+++.|++|+|.+...++..+- +.+.+.++..|.+++.|..
T Consensus 124 ~~~~~~~~~l~~~~~~~~~~~~~~~iiv~nK~D~~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~ 190 (239)
T 3lxx_A 124 RYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNN 190 (239)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHGGGEEEEEECGGGC------------CHHHHHHHHHHSSSEEECCT
T ss_pred CCCHHHHHHHHHHHHHhhhhccceEEEEEeCCccCCcccHHHHHHhchHHHHHHHHHcCCEEEEEEC
Confidence 34555555555553 234799999999999887766442 3455666777777766643
No 27
>3lxx_A GTPase IMAP family member 4; structural genomics consortium, SGC, coiled coil, GTP- binding, nucleotide-binding, immune system; HET: GDP; 2.15A {Homo sapiens}
Probab=37.11 E-value=30 Score=29.93 Aligned_cols=67 Identities=4% Similarity=0.118 Sum_probs=38.9
Q ss_pred ceEEEEEEEe--ecCcccHHHHHhhc------CcceEEeeeeecCCCCHHHHHHHH----HHHHHHHHhcccccccCCC
Q psy97 40 QIQVLIIFYF--SLRQIDIETMRRLH------HKVNIVPLIAKADTLTSAEVKKLK----KKLLEDIEENQIQIYQFPE 106 (339)
Q Consensus 40 rvhv~~~lYf--~L~~~Di~~mk~L~------~~vNvIPVIaKaD~lt~~E~~~~K----~~I~~~l~~~~I~if~fp~ 106 (339)
++|+.+++|= .+.+.+..+++.+. ...++|.|+.|+|.+...++..+- ..+.+.++..+.+++.|..
T Consensus 112 ~~~~~l~v~d~~~~~~~~~~~l~~~~~~~~~~~~~~~iiv~nK~D~~~~~~~~~~i~~~~~~l~~l~~~~~~~~~~~~~ 190 (239)
T 3lxx_A 112 GPHALLLVVPLGRYTEEEHKATEKILKMFGERARSFMILIFTRKDDLGDTNLHDYLREAPEDIQDLMDIFGDRYCALNN 190 (239)
T ss_dssp CCSEEEEEEETTCCSSHHHHHHHHHHHHHHHHHGGGEEEEEECGGGC------------CHHHHHHHHHHSSSEEECCT
T ss_pred CCcEEEEEeeCCCCCHHHHHHHHHHHHHhhhhccceEEEEEeCCccCCcccHHHHHHhchHHHHHHHHHcCCEEEEEEC
Confidence 4455544442 46667777777774 234799999999999877766433 3466677777877776654
No 28
>1wf3_A GTP-binding protein; GTPase, riken structural genomics/prote initiative, RSGI, structural genomics, hydrolase; HET: GNP; 1.88A {Thermus thermophilus} SCOP: c.37.1.8 d.52.3.1
Probab=36.67 E-value=22 Score=32.74 Aligned_cols=42 Identities=21% Similarity=0.137 Sum_probs=29.8
Q ss_pred eEEEEEEEe---ecCcccHHHHHhhcC---cceEEeeeeecCCCCHHH
Q psy97 41 IQVLIIFYF---SLRQIDIETMRRLHH---KVNIVPLIAKADTLTSAE 82 (339)
Q Consensus 41 vhv~~~lYf---~L~~~Di~~mk~L~~---~vNvIPVIaKaD~lt~~E 82 (339)
+++.+++|= ++.+.|..+++.|.. .+.+|.|+.|+|..+..+
T Consensus 87 ad~il~VvD~~~~~~~~~~~i~~~l~~~~~~~p~ilV~NK~Dl~~~~~ 134 (301)
T 1wf3_A 87 VNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKYPE 134 (301)
T ss_dssp CSEEEEEEETTSCCCHHHHHHHHHHGGGTTTSCEEEEEECGGGCSSHH
T ss_pred CCEEEEEEECCCCCChHHHHHHHHHHhhcCCCCEEEEEECcccCCchH
Confidence 455544442 566677777677765 688999999999987655
No 29
>3def_A T7I23.11 protein; chloroplast, TOC33, GTPase, hydrolase; HET: GDP; 1.96A {Arabidopsis thaliana} PDB: 3bb3_A* 3bb4_A* 2j3e_A*
Probab=33.67 E-value=55 Score=28.92 Aligned_cols=38 Identities=8% Similarity=0.294 Sum_probs=25.5
Q ss_pred eeEEEEEc------ccccchHHHHHHhccc------cceeeeeecCCCCC
Q psy97 143 KVLIIFYF------SLRQIDIETMRRLHHK------VNIVPLIAKADTLT 180 (339)
Q Consensus 143 rvh~~lYf------gl~~lDi~~mk~L~~~------vNvIPVIaKaD~LT 180 (339)
..|+.+|. ++...+...++.|... .+++.|++|+|...
T Consensus 116 ~~~~il~V~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~ivv~nK~Dl~~ 165 (262)
T 3def_A 116 TIDVLLYVDRLDVYAVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSP 165 (262)
T ss_dssp EECEEEEEEESSCSCCCHHHHHHHHHHHHHHCGGGGGGEEEEEECTTCCC
T ss_pred CCCEEEEEEcCCCCCCCHHHHHHHHHHHHHhchhhhcCEEEEEeCcccCC
Confidence 56777776 3444565666666543 38899999999853
No 30
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=26.78 E-value=35 Score=27.79 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=25.9
Q ss_pred cccceeeeeecCCCCCHHHHHHHHHHHHHHHH
Q psy97 165 HKVNIVPLIAKADTLTSAEVKKLKKKLLEDIE 196 (339)
Q Consensus 165 ~~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~ 196 (339)
..++++-|++|+|.....+...+++.+.++|.
T Consensus 155 ~~~p~ilv~nK~Dl~~~~~~~~~~~~l~~~l~ 186 (193)
T 2ged_A 155 NGIDILIACNKSELFTARPPSKIKDALESEIQ 186 (193)
T ss_dssp TCCCEEEEEECTTSTTCCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEEchHhcCCCCHHHHHHHHHHHHH
Confidence 46788999999999988777777777776665
No 31
>3r7w_A Gtpase1, GTP-binding protein GTR1; RAG gtpases, GTR1P, GTR2P, MTOR, protein transport; HET: GNP; 2.77A {Saccharomyces cerevisiae} PDB: 4arz_A*
Probab=26.11 E-value=1.2e+02 Score=27.56 Aligned_cols=45 Identities=18% Similarity=0.132 Sum_probs=32.4
Q ss_pred hcCcceEEeeeeecCCCCHHHHH----HHHHHHHHHHHhcc---cccccCCC
Q psy97 62 LHHKVNIVPLIAKADTLTSAEVK----KLKKKLLEDIEENQ---IQIYQFPE 106 (339)
Q Consensus 62 L~~~vNvIPVIaKaD~lt~~E~~----~~K~~I~~~l~~~~---I~if~fp~ 106 (339)
....+.+|-|+.|+|....++.. .....+.+..+..| +.+|....
T Consensus 112 ~~~~~piilv~NK~Dl~~~~~r~~~~~v~~~~~~~~~~~~g~~~~~~~~tSa 163 (307)
T 3r7w_A 112 YSPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSI 163 (307)
T ss_dssp HCTTCEEEEEEECGGGSCHHHHHHHHHHHHHHHHHHHHTTTCCSCEEEECCT
T ss_pred hCCCCeEEEEEecccccchhhhhHHHHHHHHHHHHHHHHcCCCCeEEEEeee
Confidence 34578999999999999877776 44456666677776 56665443
No 32
>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A*
Probab=25.29 E-value=1.1e+02 Score=30.11 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=28.1
Q ss_pred ccceeeeeecCCCCCHHHHHHHHHHHHHHHHHc
Q psy97 166 KVNIVPLIAKADTLTSAEVKKLKKKLLEDIEEN 198 (339)
Q Consensus 166 ~vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~ 198 (339)
.+++|.|++|+|....++....++.+.+.+...
T Consensus 125 ~ip~IvviNK~Dl~~~~~~~~~~~~l~~~l~~~ 157 (482)
T 1wb1_A 125 NIPIIVVITKSDNAGTEEIKRTEMIMKSILQST 157 (482)
T ss_dssp TCCBCEEEECTTSSCHHHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEECCCcccchhHHHHHHHHHHHHhhh
Confidence 466799999999999888888888888888776
No 33
>2qu8_A Putative nucleolar GTP-binding protein 1; GTPase, malaria, structural genomics, structural genomics consortium, SGC, unknown function; HET: GDP; 2.01A {Plasmodium falciparum}
Probab=23.91 E-value=58 Score=27.68 Aligned_cols=51 Identities=16% Similarity=0.180 Sum_probs=30.5
Q ss_pred cHHHHHhhcC---cceEEeeeeecCCCCHHHHHHHHH-HHHHHHHhcc--cccccCC
Q psy97 55 DIETMRRLHH---KVNIVPLIAKADTLTSAEVKKLKK-KLLEDIEENQ--IQIYQFP 105 (339)
Q Consensus 55 Di~~mk~L~~---~vNvIPVIaKaD~lt~~E~~~~K~-~I~~~l~~~~--I~if~fp 105 (339)
++.+++.+.. ...+|-|+.|+|.....++..-.. .+.+.....+ +.+|...
T Consensus 129 ~~~~~~~l~~~~~~~piilv~nK~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 185 (228)
T 2qu8_A 129 QINLFYSIKSVFSNKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFS 185 (228)
T ss_dssp HHHHHHHHHTCC-CCCEEEEEECGGGCC--CCCHHHHHHHHHHHHHCCSCEEEEECC
T ss_pred HHHHHHHHHHhhcCCcEEEEEeCcccCCchhhHHHHHHHHHHHHHhcCCCceEEEEe
Confidence 3566776665 688999999999987655433222 2333344455 6776554
No 34
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=23.53 E-value=48 Score=26.95 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=26.0
Q ss_pred CcceEEeeeeecCCCCHHHHHHHHHHHHHHHH
Q psy97 64 HKVNIVPLIAKADTLTSAEVKKLKKKLLEDIE 95 (339)
Q Consensus 64 ~~vNvIPVIaKaD~lt~~E~~~~K~~I~~~l~ 95 (339)
..+.+|-|+.|+|.....+....++.+.++|.
T Consensus 155 ~~~p~ilv~nK~Dl~~~~~~~~~~~~l~~~l~ 186 (193)
T 2ged_A 155 NGIDILIACNKSELFTARPPSKIKDALESEIQ 186 (193)
T ss_dssp TCCCEEEEEECTTSTTCCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEEchHhcCCCCHHHHHHHHHHHHH
Confidence 46789999999999988878788877776664
No 35
>3bma_A D-alanyl-lipoteichoic acid synthetase; structural genomics, D-alanyl-lipoteichoic acid biosynthesis structure initiative, PSI-2; 2.24A {Streptococcus pneumoniae}
Probab=23.03 E-value=74 Score=31.21 Aligned_cols=53 Identities=13% Similarity=0.132 Sum_probs=41.2
Q ss_pred HHHHHhhcCcceE--EeeeeecC---CCCHHHHHHHHHHHHHHHHhccc-ccccCCCCC
Q psy97 56 IETMRRLHHKVNI--VPLIAKAD---TLTSAEVKKLKKKLLEDIEENQI-QIYQFPECD 108 (339)
Q Consensus 56 i~~mk~L~~~vNv--IPVIaKaD---~lt~~E~~~~K~~I~~~l~~~~I-~if~fp~~~ 108 (339)
|..+++++-.|-+ +||-+|-= .|+.+.++.+-+.|...|+.+|+ ++.+|...+
T Consensus 282 L~~~k~~~~~vlfVi~PVNgkWydytGl~~e~r~~~~~KIk~~l~s~Gf~~i~D~s~~~ 340 (407)
T 3bma_A 282 LTQFSKSKVNPIFIIPPVNKKWMDYAGLREDMYQQTVQKIRYQLESQGFTNIADFSKDG 340 (407)
T ss_dssp HHHHHHTTCEEEEEECCCCHHHHHHTTCCHHHHHHHHHHHHHHHHTTTCCCEEECTTCT
T ss_pred HHHHHHcCCceEEEEeCCchHHHHhcCCCHHHHHHHHHHHHHHHHHCCCcceeeccccC
Confidence 4456666655554 47777543 68999999999999999999999 999997543
No 36
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=21.78 E-value=71 Score=25.36 Aligned_cols=15 Identities=27% Similarity=0.605 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhhhcc
Q psy97 287 VHYENFRAQCLSQIS 301 (339)
Q Consensus 287 ~~YE~yR~~~L~~~~ 301 (339)
.-||.|+++.|.+|+
T Consensus 17 e~YE~~h~ErL~~mS 31 (104)
T 3s9g_A 17 ETYERYHTESLQNMS 31 (104)
T ss_dssp HHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhcc
Confidence 469999999999875
No 37
>1wb1_A Translation elongation factor SELB; selenocysteine, protein synthesis, selenium, ribosome; HET: GDP DXC; 3.0A {Methanococcus maripaludis} SCOP: b.43.3.1 b.43.3.1 b.44.1.1 c.37.1.8 PDB: 1wb2_A* 1wb3_A*
Probab=21.78 E-value=1.1e+02 Score=29.95 Aligned_cols=48 Identities=19% Similarity=0.254 Sum_probs=33.5
Q ss_pred ecCcccHHHHHhhc-CcceEEeeeeecCCCCHHHHHHHHHHHHHHHHhc
Q psy97 50 SLRQIDIETMRRLH-HKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEEN 97 (339)
Q Consensus 50 ~L~~~Di~~mk~L~-~~vNvIPVIaKaD~lt~~E~~~~K~~I~~~l~~~ 97 (339)
|..+-..+.+..+. ..+.+|.|+.|+|....++....+..+.+.+...
T Consensus 109 g~~~qt~e~l~~~~~~~ip~IvviNK~Dl~~~~~~~~~~~~l~~~l~~~ 157 (482)
T 1wb1_A 109 GPKTQTGEHMLILDHFNIPIIVVITKSDNAGTEEIKRTEMIMKSILQST 157 (482)
T ss_dssp CSCHHHHHHHHHHHHTTCCBCEEEECTTSSCHHHHHHHHHHHHHHHHHS
T ss_pred CccHHHHHHHHHHHHcCCCEEEEEECCCcccchhHHHHHHHHHHHHhhh
Confidence 44444444443332 2355688999999999888888888888888776
No 38
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=21.66 E-value=99 Score=29.32 Aligned_cols=33 Identities=12% Similarity=0.145 Sum_probs=27.2
Q ss_pred ceEEeeeeecCCCCHHHHHHHHHHHHHHHHhcc
Q psy97 66 VNIVPLIAKADTLTSAEVKKLKKKLLEDIEENQ 98 (339)
Q Consensus 66 vNvIPVIaKaD~lt~~E~~~~K~~I~~~l~~~~ 98 (339)
..+|.|+.|+|..+.++.......+.+.+...+
T Consensus 130 ~~iivviNK~Dl~~~~~~~~~~~~i~~~l~~~~ 162 (403)
T 3sjy_A 130 KNLIIVQNKVDVVSKEEALSQYRQIKQFTKGTW 162 (403)
T ss_dssp CCEEEEEECGGGSCHHHHHHHHHHHHHHHTTST
T ss_pred CCEEEEEECccccchHHHHHHHHHHHHHHHhhC
Confidence 368999999999999988887788887776553
No 39
>3cnl_A YLQF, putative uncharacterized protein; circular permutation, GNP, signaling protein; HET: GNP; 2.00A {Thermotoga maritima} PDB: 3cnn_A* 3cno_A*
Probab=21.42 E-value=35 Score=30.79 Aligned_cols=49 Identities=8% Similarity=0.159 Sum_probs=40.0
Q ss_pred ccHHHHHhhcCcceEEeeeeecCCCCHHHHHHHHHHHHHHHHhcccccccCCCCC
Q psy97 54 IDIETMRRLHHKVNIVPLIAKADTLTSAEVKKLKKKLLEDIEENQIQIYQFPECD 108 (339)
Q Consensus 54 ~Di~~mk~L~~~vNvIPVIaKaD~lt~~E~~~~K~~I~~~l~~~~I~if~fp~~~ 108 (339)
.|.++|.+++.+.|.+. |+. ........+.+.++++..+|..|.+|..+
T Consensus 201 ~d~~~l~~ia~~~g~~~---kgg---~~d~~~aa~~~l~d~~~g~l~~~~l~~~~ 249 (262)
T 3cnl_A 201 SFSEFFEDFARKRGLLK---KGG---VPDIERALMLFFTEVAQGKAGRVSFERPE 249 (262)
T ss_dssp CHHHHHHHHHHHTTCBC---GGG---CBCHHHHHHHHHHHHHTTTTCSCCSCCTT
T ss_pred CcHHHHHHHHHHhCCcc---CCC---cccHHHHHHHHHHHHHcCCCCceECCCCc
Confidence 35899999999999884 553 23566788999999999999999998654
No 40
>3h2y_A GTPase family protein; GTP-binding protein YQEH, possibly involved in replication initiation, csgid, IDP90222; HET: DGI; 1.80A {Bacillus anthracis str}
Probab=20.23 E-value=2.1e+02 Score=26.90 Aligned_cols=40 Identities=13% Similarity=0.164 Sum_probs=26.5
Q ss_pred cccceeeeeecCCCCCHHH-HHHHHHHHHHHHHHcCC---cccC
Q psy97 165 HKVNIVPLIAKADTLTSAE-VKKLKKKLLEDIEENQI---QIYQ 204 (339)
Q Consensus 165 ~~vNvIPVIaKaD~LT~~E-l~~~K~~I~~~l~~~~I---~if~ 204 (339)
....+|-|++|+|++..+. ....++.+...+++.|+ ++|.
T Consensus 95 ~~~p~ilV~NK~DL~~~~~~~~~~~~~l~~~~~~~g~~~~~v~~ 138 (368)
T 3h2y_A 95 GNNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFL 138 (368)
T ss_dssp SSSCEEEEEECGGGSCTTSCHHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred CCCcEEEEEEChhcCCcccCHHHHHHHHHHHHHHcCCCcccEEE
Confidence 3567888999999986542 23445555666677787 4553
No 41
>3sjy_A Translation initiation factor 2 subunit gamma; zinc finger, initiate translation, tRNA binding, mRNA bindin binding; HET: GCP GDP; 2.00A {Sulfolobus solfataricus P2} PDB: 3pen_A* 3sjz_A* 2qn6_A* 2aho_A 2qmu_A* 2plf_A* 3v11_A* 3i1f_A* 3cw2_A 2pmd_A* 3p3m_A* 3qsy_A*
Probab=20.16 E-value=97 Score=29.38 Aligned_cols=32 Identities=13% Similarity=0.177 Sum_probs=26.3
Q ss_pred cceeeeeecCCCCCHHHHHHHHHHHHHHHHHc
Q psy97 167 VNIVPLIAKADTLTSAEVKKLKKKLLEDIEEN 198 (339)
Q Consensus 167 vNvIPVIaKaD~LT~~El~~~K~~I~~~l~~~ 198 (339)
.++|.|++|.|+.+.++.....+.+.+.+...
T Consensus 130 ~~iivviNK~Dl~~~~~~~~~~~~i~~~l~~~ 161 (403)
T 3sjy_A 130 KNLIIVQNKVDVVSKEEALSQYRQIKQFTKGT 161 (403)
T ss_dssp CCEEEEEECGGGSCHHHHHHHHHHHHHHHTTS
T ss_pred CCEEEEEECccccchHHHHHHHHHHHHHHHhh
Confidence 37899999999999998888777887777654
Done!