BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9704
(116 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A0QKN5|OTSB_MYCA1 Trehalose-phosphate phosphatase OS=Mycobacterium avium (strain 104)
GN=otsB PE=3 SV=1
Length = 391
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTAFG 61
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDGS H A+I +L A G
Sbjct: 179 CPVAVLSGRDLADVTKRVGVPGIWYAGSHGFELTAPDGSH--HQNDDAAAAIPVLAQAAG 236
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 71 IYAGDDVTDEDAMEALKG 88
+Y GDD+TDEDA +A++G
Sbjct: 326 VYLGDDITDEDAFDAVRG 343
>sp|B2HDP8|OTSB_MYCMM Trehalose-phosphate phosphatase OS=Mycobacterium marinum (strain
ATCC BAA-535 / M) GN=otsB PE=3 SV=1
Length = 390
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTA 59
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDG+ H A+I +L A
Sbjct: 182 CPVAILSGRDLADVSQRVGLPGIWYAGSHGFELTAPDGTH--HQNEAAAAAIPVLEQA 237
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 71 IYAGDDVTDEDAMEAL--KGMAATFRVTQSQIVKTAA 105
IY GDD+TDEDA +A+ G+A R + TAA
Sbjct: 329 IYLGDDITDEDAFDAVGPNGVAIMVRHNEDGDRATAA 365
>sp|A0PMI0|OTSB_MYCUA Trehalose-phosphate phosphatase OS=Mycobacterium ulcerans (strain
Agy99) GN=otsB PE=3 SV=1
Length = 390
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTA 59
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDG+ H A+I +L A
Sbjct: 182 CPVAILSGRDLADVSQRVGLPGIWYAGSHGFELTAPDGTH--HQNEAAAAAIPVLEQA 237
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Query: 71 IYAGDDVTDEDAMEAL--KGMAATFRVTQSQIVKTAA 105
IY GDD+TDEDA +A+ G+A R + TAA
Sbjct: 329 IYLGDDITDEDAFDAVGPNGVAIMVRHNEDGDRATAA 365
>sp|Q73U90|OTSB_MYCPA Trehalose-phosphate phosphatase OS=Mycobacterium paratuberculosis
(strain ATCC BAA-968 / K-10) GN=otsB PE=3 SV=1
Length = 391
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTAFG 61
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDGS H A+I +L A G
Sbjct: 179 CPVAVLSGRDLADVTKRVGVLGIWYAGSHGFELTAPDGSH--HQNDDAAAAIPVLAQAAG 236
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 11/18 (61%), Positives = 16/18 (88%)
Query: 71 IYAGDDVTDEDAMEALKG 88
+Y GDD+TDEDA +A++G
Sbjct: 326 VYLGDDITDEDAFDAVRG 343
>sp|O50401|OTSB_MYCTU Trehalose-phosphate phosphatase OS=Mycobacterium tuberculosis
GN=otsB PE=1 SV=1
Length = 391
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTA 59
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDG+ H A+I +L+ A
Sbjct: 179 CPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPDGTH--HQNDAAAAAIPVLKQA 234
>sp|A5U846|OTSB_MYCTA Trehalose-phosphate phosphatase OS=Mycobacterium tuberculosis
(strain ATCC 25177 / H37Ra) GN=otsB PE=3 SV=1
Length = 391
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTA 59
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDG+ H A+I +L+ A
Sbjct: 179 CPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPDGTH--HQNDAAAAAIPVLKQA 234
>sp|A1KP65|OTSB_MYCBP Trehalose-phosphate phosphatase OS=Mycobacterium bovis (strain BCG
/ Pasteur 1173P2) GN=otsB PE=3 SV=1
Length = 391
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTA 59
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDG+ H A+I +L+ A
Sbjct: 179 CPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPDGTH--HQNDAAAAAIPVLKQA 234
>sp|Q7TWL7|OTSB_MYCBO Trehalose-phosphate phosphatase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=otsB PE=3 SV=1
Length = 391
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 2/58 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTA 59
C ++SGR++ +V + VG+ G+ YAG+HG E+ PDG+ H A+I +L+ A
Sbjct: 179 CPIAVLSGRDLADVTQRVGLPGIWYAGSHGFELTAPDGTH--HQNDAAAAAIPVLKQA 234
>sp|Q10850|Y2006_MYCTU Uncharacterized glycosyl hydrolase Rv2006/MT2062 OS=Mycobacterium
tuberculosis GN=Rv2006 PE=1 SV=1
Length = 1327
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 1 MCTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGS 40
C +ISGR++ +V V ++GL AG+HG E++ PDGS
Sbjct: 318 QCPVAVISGRDLADVRNRVKVDGLWLAGSHGFELVAPDGS 357
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 71 IYAGDDVTDEDAMEALK--GMAATFRVTQSQIVKTAAERRL 109
IY GDD+TDEDA +A++ G+ R + ++AA RL
Sbjct: 468 IYIGDDLTDEDAFDAVRFTGVGIVVRHNEHGDRRSAATFRL 508
>sp|Q49734|OTSB_MYCLE Trehalose-phosphate phosphatase OS=Mycobacterium leprae (strain TN)
GN=otsB PE=3 SV=1
Length = 429
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 2 CTSLLISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVHPIPTECASIYILRTA 59
C ++SGR++ +V++ +G+ G+ Y+G+HG E PDG+ H A+I IL A
Sbjct: 213 CPVAILSGRDLADVIKRIGVPGIWYSGSHGFESTAPDGTH--HQNDAAEATIPILEQA 268
>sp|O64896|TPPA_ARATH Trehalose-phosphate phosphatase A OS=Arabidopsis thaliana GN=TPPA
PE=1 SV=1
Length = 385
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGSRFVH 44
+ISGR+ V E V + L YAG+HG++I+ P G H
Sbjct: 162 IISGRSRDKVYEFVNLSELYYAGSHGMDIMSPAGESLNH 200
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALK 87
++ L + GL+ E V IY GDD TDEDA + L+
Sbjct: 305 AVTFLLESLGLNNCEDVLPIYVGDDRTDEDAFKVLR 340
>sp|Q9SUW0|TPPG_ARATH Probable trehalose-phosphate phosphatase G OS=Arabidopsis thaliana
GN=TPPG PE=2 SV=1
Length = 377
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEI---IHPDGS 40
+ISGR+ V ++VG+ L YAG+HG++I ++P+GS
Sbjct: 149 IISGRSRDKVYQLVGLTELYYAGSHGMDIMTPVNPNGS 186
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVKTA 104
++ L + GL + I+ GDD TDEDA + L+ F + S + K +
Sbjct: 293 AVEFLLESLGLSNNDEFLPIFIGDDKTDEDAFKVLREGNRGFGILVSSVPKES 345
>sp|Q75WV3|TPP1_ORYSJ Probable trehalose-phosphate phosphatase 1 OS=Oryza sativa subsp.
japonica GN=TPP1 PE=1 SV=1
Length = 371
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVK 102
++ L + GL+ +E V IY GDD TDEDA + L+ + + SQ+ K
Sbjct: 292 AVEFLLQSLGLNDSENVIPIYIGDDRTDEDAFKVLRQRNCGYGILVSQVPK 342
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 25/35 (71%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGS 40
++SGR+ + V E V ++ L YAG+HG++I+ P +
Sbjct: 157 IVSGRSRNKVFEFVKLKELYYAGSHGMDIMAPSAN 191
>sp|Q10KF5|TPP9_ORYSJ Probable trehalose-phosphate phosphatase 9 OS=Oryza sativa subsp.
japonica GN=TPP9 PE=2 SV=1
Length = 374
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
++SGR V+ VG+E L YAG+HG++I P
Sbjct: 151 IVSGRCRDKVLSFVGLEELYYAGSHGMDIQGP 182
>sp|Q9FWQ2|TPP2_ORYSJ Probable trehalose-phosphate phosphatase 2 OS=Oryza sativa subsp.
japonica GN=TPP2 PE=1 SV=1
Length = 382
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVK 102
++ L + GL E V IY GDD TDEDA + LK + F + S + K
Sbjct: 303 AVEFLLESLGLCGKEDVLPIYVGDDKTDEDAFKVLKANSIGFGILVSSVPK 353
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
+ISGR+ V + V + L YAG+HG++I+ P
Sbjct: 158 IISGRSRDKVFDFVKLTELYYAGSHGMDIMGP 189
>sp|Q5HZ05|TPPJ_ARATH Probable trehalose-phosphate phosphatase J OS=Arabidopsis thaliana
GN=TPPJ PE=1 SV=1
Length = 370
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVK-TAAERRLP 110
++ L + G + V IY GDD TDEDA + L+G F + S+ K T+A L
Sbjct: 291 ALEFLLESLGFENCNDVFPIYIGDDKTDEDAFKLLRGRGQGFGILVSKFPKDTSASYSLQ 350
Query: 111 SKP 113
P
Sbjct: 351 DPP 353
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
+++GR + V V + L YAG+HG++I P
Sbjct: 157 IVTGRCIDKVYSFVKLAELYYAGSHGMDIKGP 188
>sp|Q9SU39|TPPF_ARATH Probable trehalose-phosphate phosphatase F OS=Arabidopsis thaliana
GN=TPPF PE=2 SV=1
Length = 368
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEII 35
+ISGR+ V ++VG+ L YAG+HG++I+
Sbjct: 146 IISGRSRDKVYQLVGLTELYYAGSHGMDIM 175
Score = 32.3 bits (72), Expect = 0.78, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVKTA 104
++ L + GL + + IY GDD TDEDA + L+ F + S I K +
Sbjct: 284 AVEFLLESLGLSNKDDLLPIYIGDDTTDEDAFKVLRDGNRGFGILVSSIPKES 336
>sp|F4I1A6|TPPC_ARATH Probable trehalose-phosphate phosphatase C OS=Arabidopsis thaliana
GN=TPPC PE=2 SV=1
Length = 320
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
+ISGR+ V V + G+ YAG+HG++I P
Sbjct: 108 IISGRSTDKVQSFVKLTGIHYAGSHGMDIKGP 139
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVK 102
++ L + G+ ++ V +Y GDD TDEDA + L F + S+ +K
Sbjct: 239 ALEFLLNSLGIAESKDVLPVYIGDDRTDEDAFKVLCERGQGFGIIVSKTIK 289
>sp|Q0DDI1|TPP8_ORYSJ Probable trehalose-phosphate phosphatase 8 OS=Oryza sativa subsp.
japonica GN=TPP8 PE=2 SV=3
Length = 500
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGS 40
+++GR V V VG+ L YAG+HG++I P +
Sbjct: 158 IVTGRCVDKVQSFVGLPELYYAGSHGMDIKGPSSN 192
>sp|Q7XI41|TPP3_ORYSJ Probable trehalose-phosphate phosphatase 3 OS=Oryza sativa subsp.
japonica GN=TPP3 PE=2 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
++SGR + V + V +E L YAG+HG++I P
Sbjct: 142 IVSGRCIDKVFDFVKLEELYYAGSHGMDIRGP 173
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 51 ASIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVKTAA 105
+++ L + G + V IY GDD TDEDA + L+ M + +++ K A
Sbjct: 280 SALQFLLKSLGYEGRNNVFPIYIGDDRTDEDAFKVLRNMGQGIGILVTKVPKETA 334
>sp|Q6ZGP8|TPP4_ORYSJ Probable trehalose-phosphate phosphatase 4 OS=Oryza sativa subsp.
japonica GN=TPP4 PE=2 SV=1
Length = 367
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDGS 40
++SGR V VG+ L YAG+HG++I P +
Sbjct: 151 IVSGRCRDKVRNFVGLSDLYYAGSHGMDIKGPSSN 185
>sp|Q0D6F4|TPP10_ORYSJ Probable trehalose-phosphate phosphatase 10 OS=Oryza sativa subsp.
japonica GN=TPP10 PE=2 SV=1
Length = 359
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPDG 39
+ISGR+ V + V + L YAG+HG++I+ P G
Sbjct: 131 IISGRSRDKVFDFVKLTELYYAGSHGMDIMGPVG 164
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVKTA 104
++ L + L + V IY GDD TDEDA + L+ F + S + K +
Sbjct: 276 AVEFLLDSLDLASCKNVLPIYIGDDCTDEDAFKVLRDDKRGFGILVSSVPKDS 328
>sp|Q8GWG2|TPPH_ARATH Probable trehalose-phosphate phosphatase H OS=Arabidopsis thaliana
GN=TPPH PE=2 SV=1
Length = 349
Score = 33.5 bits (75), Expect = 0.35, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPD-GSRF 42
++SGR + V V + L YAG+HG++I P+ GS++
Sbjct: 132 IVSGRCIEKVYNFVKLTELYYAGSHGMDIKGPEQGSKY 169
>sp|Q67XC9|TPPD_ARATH Probable trehalose-phosphate phosphatase D OS=Arabidopsis thaliana
GN=TPPD PE=2 SV=1
Length = 369
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVKTAA 105
++ L + G + V IY GDD TDEDA + L+ F + S+I K +
Sbjct: 287 ALEFLLESLGFANSNDVLPIYIGDDRTDEDAFKVLRNKGQGFGILVSKIPKETS 340
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 20/32 (62%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
+++GR V V + GL YAG+HG++I P
Sbjct: 154 IVTGRCRDKVRRFVKLPGLYYAGSHGMDIKGP 185
>sp|Q7XT34|TPP5_ORYSJ Probable trehalose-phosphate phosphatase 5 OS=Oryza sativa subsp.
japonica GN=TPP5 PE=2 SV=2
Length = 349
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 54 YILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVKTA 104
++LR+ LD +E V IY GDD TDEDA + L+ + SQ+ K +
Sbjct: 270 FLLRS-LELDDSETVLPIYIGDDKTDEDAFKVLRERKNGCGILVSQVPKKS 319
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEII 35
++SGR+ V + V + + YAG+HG++I+
Sbjct: 132 IVSGRSRDKVFDFVKLTEIYYAGSHGMDIL 161
>sp|Q6ZAL2|TPP6_ORYSJ Probable trehalose-phosphate phosphatase 6 OS=Oryza sativa subsp.
japonica GN=TPP6 PE=2 SV=1
Length = 370
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
++SGR V E V + L YAG+HG++I P
Sbjct: 152 IVSGRCRDKVFEFVKLAELYYAGSHGMDIKGP 183
>sp|Q6H5L4|TPP7_ORYSJ Probable trehalose-phosphate phosphatase 7 OS=Oryza sativa subsp.
japonica GN=TPP7 PE=2 SV=2
Length = 375
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
++SGR V E V + L YAG+HG++I P
Sbjct: 155 IVSGRCRDKVFEFVKLAELYYAGSHGMDIKGP 186
>sp|Q9C9S4|TPPB_ARATH Trehalose-phosphate phosphatase B OS=Arabidopsis thaliana GN=TPPB
PE=1 SV=1
Length = 374
Score = 32.3 bits (72), Expect = 0.85, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVK 102
++ L + G + ++ V +Y GDD TDEDA + L+ F + S++ K
Sbjct: 292 ALNFLLKSLGYENSDDVVPVYIGDDRTDEDAFKVLRERGQGFGILVSKVPK 342
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
+++GR++ V V + + YAG+HG++I P
Sbjct: 159 IVTGRSIEKVRSFVQVNEIYYAGSHGMDIEGP 190
>sp|Q67X99|TPPE_ARATH Probable trehalose-phosphate phosphatase E OS=Arabidopsis thaliana
GN=TPPE PE=2 SV=1
Length = 354
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHPD-GSRF 42
++SGR V V + L YAG+HG++I P+ GS++
Sbjct: 140 IVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKY 177
>sp|F4KFG5|TPPI_ARATH Probable trehalose-phosphate phosphatase I OS=Arabidopsis thaliana
GN=TPPI PE=2 SV=1
Length = 369
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 52 SIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFRVTQSQIVK 102
++ L + G T V +Y GDD TDEDA + L+ F + S+ K
Sbjct: 288 ALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK 338
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 6 LISGRNVHNVMEMVGIEGLTYAGNHGLEIIHP 37
+++GR + V V + L YAG+HG++I P
Sbjct: 154 IVTGRCIDKVYNFVKLAELYYAGSHGMDIKGP 185
>sp|Q9RVL1|MNME_DEIRA tRNA modification GTPase MnmE OS=Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC
15346 / NCIMB 9279 / R1 / VKM B-1422) GN=mnmE PE=3 SV=1
Length = 443
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 10 RNVHNVMEMVGI-EGLTYAGNHGLEIIHPDGSRFVHPIPTE---CASIYILRTAFGLD-- 63
R +++E G+ + + AGN L ++ DGS+ P+PTE A++ LRT L
Sbjct: 283 RETEDLIEAAGVRQAVALAGNADLVLVLEDGSQPREPLPTELPPTATVLRLRTKADLPAA 342
Query: 64 WTE 66
WT+
Sbjct: 343 WTD 345
>sp|Q7N8B9|FBPC_PHOLL Fe(3+) ions import ATP-binding protein FbpC OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=fbpC PE=3
SV=1
Length = 351
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 22/48 (45%)
Query: 32 LEIIHPDGSRFVHPIPTECASIYILRTAFGLDWTERVKIIYAGDDVTD 79
LE+ P G P+ C +LR GL+ KI G+DVTD
Sbjct: 25 LELSIPQGHMVTLLGPSGCGKTTVLRLVAGLEKPSAGKIFIDGEDVTD 72
>sp|Q7WGW1|CYSA_BORBR Sulfate/thiosulfate import ATP-binding protein CysA OS=Bordetella
bronchiseptica (strain ATCC BAA-588 / NCTC 13252 /
RB50) GN=cysA PE=3 SV=1
Length = 354
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 47 PTECASIYILRTAFGLDWTERVKIIYAGDDVTDEDAME 84
P+ C +LR GL+ + +++AG+D TD D +
Sbjct: 36 PSGCGKTTLLRIIAGLESADAGSVLFAGEDATDVDVRQ 73
>sp|Q65T42|CYSA_MANSM Sulfate/thiosulfate import ATP-binding protein CysA OS=Mannheimia
succiniciproducens (strain MBEL55E) GN=cysA PE=3 SV=1
Length = 358
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 47 PTECASIYILRTAFGLDWTERVKIIYAGDDVTDEDAMEALKGMAATFR 94
P+ C +LR GL++ + KI++ DVTD A + +G+ F+
Sbjct: 36 PSGCGKTTLLRIIAGLEFADSGKILFEHRDVTDLSAKD--RGVGFVFQ 81
>sp|P65497|NADA_MYCTU Quinolinate synthase A OS=Mycobacterium tuberculosis GN=nadA PE=3
SV=1
Length = 349
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 26 YAGNHGLEII-----HPDGSRFVHPIPTECASIYILRTAFGLDWTERVKIIYAG 74
+AG +G E+ HPD FVHP CA+ + G ERVKI+ G
Sbjct: 204 HAGINGDELADQARAHPDAELFVHP-ECGCATSALYLAGEGAFPAERVKILSTG 256
>sp|A5U2V0|NADA_MYCTA Quinolinate synthase A OS=Mycobacterium tuberculosis (strain ATCC
25177 / H37Ra) GN=nadA PE=3 SV=1
Length = 349
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 26 YAGNHGLEII-----HPDGSRFVHPIPTECASIYILRTAFGLDWTERVKIIYAG 74
+AG +G E+ HPD FVHP CA+ + G ERVKI+ G
Sbjct: 204 HAGINGDELADQARAHPDAELFVHP-ECGCATSALYLAGEGAFPAERVKILSTG 256
>sp|C1ANL6|NADA_MYCBT Quinolinate synthase A OS=Mycobacterium bovis (strain BCG / Tokyo
172 / ATCC 35737 / TMC 1019) GN=nadA PE=3 SV=1
Length = 349
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 26 YAGNHGLEII-----HPDGSRFVHPIPTECASIYILRTAFGLDWTERVKIIYAG 74
+AG +G E+ HPD FVHP CA+ + G ERVKI+ G
Sbjct: 204 HAGINGDELADQARAHPDAELFVHP-ECGCATSALYLAGEGAFPAERVKILSTG 256
>sp|A1KJ10|NADA_MYCBP Quinolinate synthase A OS=Mycobacterium bovis (strain BCG / Pasteur
1173P2) GN=nadA PE=3 SV=1
Length = 349
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 26 YAGNHGLEII-----HPDGSRFVHPIPTECASIYILRTAFGLDWTERVKIIYAG 74
+AG +G E+ HPD FVHP CA+ + G ERVKI+ G
Sbjct: 204 HAGINGDELADQARAHPDAELFVHP-ECGCATSALYLAGEGAFPAERVKILSTG 256
>sp|P65498|NADA_MYCBO Quinolinate synthase A OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=nadA PE=3 SV=1
Length = 349
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 26 YAGNHGLEII-----HPDGSRFVHPIPTECASIYILRTAFGLDWTERVKIIYAG 74
+AG +G E+ HPD FVHP CA+ + G ERVKI+ G
Sbjct: 204 HAGINGDELADQARAHPDAELFVHP-ECGCATSALYLAGEGAFPAERVKILSTG 256
>sp|Q2L0H5|UGPC_BORA1 sn-glycerol-3-phosphate import ATP-binding protein UgpC
OS=Bordetella avium (strain 197N) GN=ugpC PE=3 SV=1
Length = 361
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 25 TYAGN----HGLEIIHPDGSRFVHPIPTECASIYILRTAFGLDWTERVKIIYAGDDVTDE 80
TYAGN HG+++ DG V P+ C ++R GL+ +I+ DD
Sbjct: 12 TYAGNVPVIHGIDMEIKDGEFIVIVGPSGCGKSTLMRMVAGLETVTSGEILI--DDKPVN 69
Query: 81 DAMEALKGMAATFR 94
D A + +A F+
Sbjct: 70 DLEPAERDIAMVFQ 83
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,450,651
Number of Sequences: 539616
Number of extensions: 1600585
Number of successful extensions: 4096
Number of sequences better than 100.0: 47
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4031
Number of HSP's gapped (non-prelim): 77
length of query: 116
length of database: 191,569,459
effective HSP length: 84
effective length of query: 32
effective length of database: 146,241,715
effective search space: 4679734880
effective search space used: 4679734880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)