BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9706
(39 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80TE4|SI1L2_MOUSE Signal-induced proliferation-associated 1-like protein 2 OS=Mus
musculus GN=Sipa1l2 PE=1 SV=3
Length = 1722
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 4 RHTLEEELKDLREENKKLKEESQNALQQLRRFTEW 38
+ L+ E++ LR++N +L+EESQ A QLR+FTEW
Sbjct: 1679 KAVLQAEVQHLRQDNMRLQEESQTATAQLRKFTEW 1713
>sp|Q9P2F8|SI1L2_HUMAN Signal-induced proliferation-associated 1-like protein 2 OS=Homo
sapiens GN=SIPA1L2 PE=1 SV=2
Length = 1722
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 4 RHTLEEELKDLREENKKLKEESQNALQQLRRFTEW 38
+ L+ E++ LR++N +L+EESQ A QLR+FTEW
Sbjct: 1679 KAVLQAEVQHLRQDNMRLQEESQTATAQLRKFTEW 1713
>sp|Q5JCS6|SI1L2_RAT Signal-induced proliferation-associated 1-like protein 2 OS=Rattus
norvegicus GN=Sipa1l2 PE=2 SV=1
Length = 1722
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 4 RHTLEEELKDLREENKKLKEESQNALQQLRRFTEW 38
+ L+ E++ LR++N +L+EESQ A QLR FTEW
Sbjct: 1679 KAVLQAEVQHLRQDNMRLQEESQTATAQLRTFTEW 1713
>sp|O43166|SI1L1_HUMAN Signal-induced proliferation-associated 1-like protein 1 OS=Homo
sapiens GN=SIPA1L1 PE=1 SV=4
Length = 1804
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 27/32 (84%)
Query: 7 LEEELKDLREENKKLKEESQNALQQLRRFTEW 38
L+ E++ LRE+N +L+EESQNA +L++FTEW
Sbjct: 1765 LQAEVQHLREDNLRLQEESQNASDKLKKFTEW 1796
>sp|Q8C0T5|SI1L1_MOUSE Signal-induced proliferation-associated 1-like protein 1 OS=Mus
musculus GN=Sipa1l1 PE=1 SV=2
Length = 1782
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 27/32 (84%)
Query: 7 LEEELKDLREENKKLKEESQNALQQLRRFTEW 38
L+ E++ LRE+N +L+EESQNA +L++FTEW
Sbjct: 1743 LQAEVEHLREDNLRLQEESQNASDKLKKFTEW 1774
>sp|O35412|SI1L1_RAT Signal-induced proliferation-associated 1-like protein 1 OS=Rattus
norvegicus GN=Sipa1l1 PE=1 SV=1
Length = 1822
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 27/32 (84%)
Query: 7 LEEELKDLREENKKLKEESQNALQQLRRFTEW 38
L+ E++ LRE+N +L+EESQNA +L++FTEW
Sbjct: 1783 LQAEVEHLREDNLRLQEESQNASDKLKKFTEW 1814
>sp|O60292|SI1L3_HUMAN Signal-induced proliferation-associated 1-like protein 3 OS=Homo
sapiens GN=SIPA1L3 PE=1 SV=3
Length = 1781
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 7 LEEELKDLREENKKLKEESQNALQQLRRFTE 37
L+ E+ LR+ N++L+EESQ A +QLR+F E
Sbjct: 1742 LQSEVASLRQNNQRLQEESQAASEQLRKFAE 1772
>sp|Q86TG7|PEG10_HUMAN Retrotransposon-derived protein PEG10 OS=Homo sapiens GN=PEG10
PE=1 SV=2
Length = 708
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 2 RRRHTLEEELKDLREENKKLKEESQNALQQLRRFTE 37
RRR L EE+ +LRE+ K EE+ N Q+++ TE
Sbjct: 4 RRRDELSEEINNLREKVMKQSEENNNLQSQVQKLTE 39
>sp|Q96FS4|SIPA1_HUMAN Signal-induced proliferation-associated protein 1 OS=Homo sapiens
GN=SIPA1 PE=1 SV=1
Length = 1042
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 4 RHTLEEELKDLREENKKLKEESQNALQQL 32
R LEEE++ LR N++L+ ES++A +L
Sbjct: 999 RAALEEEVRSLRHNNRRLQAESESAATRL 1027
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.125 0.341
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,207,765
Number of Sequences: 539616
Number of extensions: 351923
Number of successful extensions: 6266
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 6183
Number of HSP's gapped (non-prelim): 87
length of query: 39
length of database: 191,569,459
effective HSP length: 13
effective length of query: 26
effective length of database: 184,554,451
effective search space: 4798415726
effective search space used: 4798415726
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)