RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy9708
         (99 letters)



>d1sdwa1 b.121.1.2 (A:45-198) Peptidylglycine alpha-hydroxylating
           monooxygenase, PHM {Rat (Rattus norvegicus) [TaxId:
           10116]}
          Length = 154

 Score = 23.1 bits (49), Expect = 8.4
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query: 42  ATQLIESAGFKAGAWVENKGPLLTFHYTNTP 72
            T+L +  GF+ G    +K  +L  HY +  
Sbjct: 103 PTRLPKGVGFRVGGETGSKYFVLQVHYGDIS 133


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.133    0.418 

Gapped
Lambda     K      H
   0.267   0.0549    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 364,427
Number of extensions: 13367
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 35
Number of HSP's successfully gapped: 1
Length of query: 99
Length of database: 2,407,596
Length adjustment: 61
Effective length of query: 38
Effective length of database: 1,570,066
Effective search space: 59662508
Effective search space used: 59662508
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.3 bits)