Query psy9709
Match_columns 500
No_of_seqs 359 out of 2625
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 17:37:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ezw_A Glycerol kinase; glycer 100.0 1.6E-63 5.5E-68 530.4 29.5 343 151-500 2-395 (526)
2 4e1j_A Glycerol kinase; struct 100.0 5.4E-63 1.8E-67 524.9 30.6 345 149-500 22-416 (520)
3 3ifr_A Carbohydrate kinase, FG 100.0 2.8E-63 9.7E-68 526.0 28.0 336 151-500 5-394 (508)
4 3ll3_A Gluconate kinase; xylul 100.0 1E-62 3.5E-67 521.3 30.9 333 151-500 2-387 (504)
5 3hz6_A Xylulokinase; xylulose, 100.0 3.8E-63 1.3E-67 525.4 27.5 335 151-500 3-398 (511)
6 3h3n_X Glycerol kinase; ATP-bi 100.0 1.1E-62 3.7E-67 521.6 30.4 343 151-500 3-396 (506)
7 3g25_A Glycerol kinase; IDP007 100.0 1.9E-62 6.3E-67 519.5 30.2 344 150-500 3-397 (501)
8 2p3r_A Glycerol kinase; glycer 100.0 1.7E-62 5.8E-67 520.3 29.6 340 152-500 2-394 (510)
9 2zf5_O Glycerol kinase; hypert 100.0 2.3E-60 7.7E-65 503.3 29.2 338 152-500 2-388 (497)
10 2dpn_A Glycerol kinase; thermu 100.0 1E-59 3.6E-64 497.9 31.1 338 153-500 2-391 (495)
11 3jvp_A Ribulokinase; PSI-II, N 100.0 1E-59 3.5E-64 505.6 30.3 337 152-500 4-433 (572)
12 2w40_A Glycerol kinase, putati 100.0 2.2E-59 7.6E-64 496.4 31.0 340 153-500 4-399 (503)
13 2d4w_A Glycerol kinase; alpha 100.0 1.3E-59 4.3E-64 498.1 29.1 339 153-500 2-396 (504)
14 2itm_A Xylulose kinase, xylulo 100.0 1.1E-58 3.8E-63 489.0 28.8 328 154-500 1-380 (484)
15 3i8b_A Xylulose kinase; strain 100.0 9.9E-58 3.4E-62 483.3 25.8 325 151-500 3-418 (515)
16 3l0q_A Xylulose kinase; xlylul 100.0 4.6E-57 1.6E-61 483.5 28.1 331 151-500 3-436 (554)
17 4bc3_A Xylulose kinase; transf 100.0 2.3E-55 7.8E-60 468.6 26.3 329 152-500 9-428 (538)
18 3h6e_A Carbohydrate kinase, FG 100.0 9.5E-54 3.3E-58 448.2 22.6 316 151-500 4-385 (482)
19 2uyt_A Rhamnulokinase; rhamnos 100.0 3.1E-50 1.1E-54 425.3 16.5 322 151-500 2-386 (489)
20 3ezw_A Glycerol kinase; glycer 99.9 9.5E-23 3.2E-27 216.6 12.3 108 22-133 2-109 (526)
21 3ll3_A Gluconate kinase; xylul 99.8 1.8E-20 6.2E-25 197.9 11.9 102 24-133 4-105 (504)
22 3hz6_A Xylulokinase; xylulose, 99.8 3.2E-20 1.1E-24 196.3 11.6 104 24-133 5-108 (511)
23 4e1j_A Glycerol kinase; struct 99.8 6.2E-20 2.1E-24 194.4 13.5 109 21-133 23-131 (520)
24 2p3r_A Glycerol kinase; glycer 99.8 6.4E-20 2.2E-24 194.0 13.1 106 24-133 3-108 (510)
25 3h3n_X Glycerol kinase; ATP-bi 99.8 5.5E-20 1.9E-24 194.4 12.5 107 23-133 4-110 (506)
26 3ifr_A Carbohydrate kinase, FG 99.8 5.5E-20 1.9E-24 194.4 12.0 105 24-133 7-111 (508)
27 3g25_A Glycerol kinase; IDP007 99.8 2E-19 6.8E-24 189.9 12.5 106 24-133 6-111 (501)
28 3l0q_A Xylulose kinase; xlylul 99.8 1.4E-19 4.6E-24 193.5 11.2 104 24-133 5-117 (554)
29 3jvp_A Ribulokinase; PSI-II, N 99.8 3.4E-19 1.2E-23 191.0 11.4 105 24-132 5-131 (572)
30 2zf5_O Glycerol kinase; hypert 99.8 6.8E-19 2.3E-23 185.7 12.1 105 24-133 3-107 (497)
31 2w40_A Glycerol kinase, putati 99.8 2.2E-18 7.6E-23 182.1 11.8 106 24-133 4-111 (503)
32 3h6e_A Carbohydrate kinase, FG 99.8 1E-18 3.5E-23 182.8 8.9 96 25-133 7-102 (482)
33 2d4w_A Glycerol kinase; alpha 99.7 3.8E-18 1.3E-22 180.2 12.8 104 25-132 3-106 (504)
34 2dpn_A Glycerol kinase; thermu 99.7 3.1E-18 1E-22 180.7 12.0 104 25-132 3-106 (495)
35 2itm_A Xylulose kinase, xylulo 99.7 9.8E-18 3.4E-22 176.3 12.0 101 26-133 2-102 (484)
36 4bc3_A Xylulose kinase; transf 99.7 1E-17 3.5E-22 178.2 9.2 104 24-133 10-145 (538)
37 3i8b_A Xylulose kinase; strain 99.7 3.3E-17 1.1E-21 173.1 12.2 95 23-133 4-99 (515)
38 2uyt_A Rhamnulokinase; rhamnos 99.7 3.6E-17 1.2E-21 172.4 9.0 103 22-133 2-108 (489)
39 2qm1_A Glucokinase; alpha-beta 98.5 3.1E-07 1.1E-11 91.0 10.9 91 24-130 6-97 (326)
40 2qm1_A Glucokinase; alpha-beta 98.4 4.9E-07 1.7E-11 89.5 9.0 94 150-259 3-97 (326)
41 1zc6_A Probable N-acetylglucos 98.3 1.8E-06 6.1E-11 84.7 10.8 73 24-107 11-85 (305)
42 2hoe_A N-acetylglucosamine kin 98.3 1E-06 3.5E-11 89.3 8.3 90 24-129 87-177 (380)
43 1z05_A Transcriptional regulat 98.3 1.9E-06 6.5E-11 88.8 10.2 89 24-129 108-197 (429)
44 1z6r_A MLC protein; transcript 98.3 1.7E-06 5.7E-11 88.5 8.7 89 24-129 85-175 (406)
45 2ch5_A NAGK protein; transfera 98.2 2.4E-06 8.1E-11 85.3 9.4 74 24-107 6-80 (347)
46 1z05_A Transcriptional regulat 98.2 5.1E-06 1.8E-10 85.5 11.1 97 151-264 106-203 (429)
47 4db3_A Glcnac kinase, N-acetyl 98.2 4.8E-06 1.6E-10 82.5 10.5 83 25-128 25-107 (327)
48 1z6r_A MLC protein; transcript 98.1 4.6E-06 1.6E-10 85.2 9.1 97 151-264 83-181 (406)
49 3vgl_A Glucokinase; ROK family 98.1 3.1E-06 1.1E-10 83.6 7.5 90 153-265 2-92 (321)
50 2yhw_A Bifunctional UDP-N-acet 98.1 4.5E-06 1.5E-10 83.2 8.7 88 24-129 30-120 (343)
51 2hoe_A N-acetylglucosamine kin 98.1 3.3E-06 1.1E-10 85.5 7.7 97 152-264 86-183 (380)
52 3r8e_A Hypothetical sugar kina 98.1 4.4E-06 1.5E-10 82.5 8.5 87 24-130 19-107 (321)
53 4db3_A Glcnac kinase, N-acetyl 98.1 8.1E-06 2.8E-10 80.9 9.3 89 154-263 25-114 (327)
54 3vgl_A Glucokinase; ROK family 98.1 6.2E-06 2.1E-10 81.5 8.4 82 25-129 3-85 (321)
55 2yhw_A Bifunctional UDP-N-acet 98.0 9.7E-06 3.3E-10 80.8 8.5 96 152-265 29-127 (343)
56 3r8e_A Hypothetical sugar kina 98.0 7.8E-06 2.7E-10 80.7 7.1 94 151-264 17-112 (321)
57 1hux_A Activator of (R)-2-hydr 97.9 1E-05 3.5E-10 77.8 6.3 118 25-180 4-121 (270)
58 2e2o_A Hexokinase; acetate and 97.9 2E-05 6.8E-10 76.9 7.1 55 25-86 3-57 (299)
59 3htv_A D-allose kinase, alloki 97.8 1.5E-05 5.2E-10 78.2 5.9 86 24-129 7-93 (310)
60 3htv_A D-allose kinase, alloki 97.8 1E-05 3.5E-10 79.5 4.4 87 152-258 6-93 (310)
61 2ch5_A NAGK protein; transfera 97.8 3.3E-05 1.1E-09 77.0 7.6 102 150-265 3-117 (347)
62 1zc6_A Probable N-acetylglucos 97.7 9E-05 3.1E-09 72.4 9.7 77 153-244 11-89 (305)
63 2ap1_A Putative regulator prot 97.7 0.00011 3.9E-09 72.4 10.0 81 25-126 25-105 (327)
64 4htl_A Beta-glucoside kinase; 97.6 0.00014 4.9E-09 70.7 9.4 80 25-129 5-86 (297)
65 3vov_A Glucokinase, hexokinase 97.6 6.3E-05 2.2E-09 73.5 6.6 84 25-129 2-87 (302)
66 1hux_A Activator of (R)-2-hydr 97.6 8.2E-05 2.8E-09 71.4 6.8 77 410-498 127-204 (270)
67 4htl_A Beta-glucoside kinase; 97.6 8.8E-05 3E-09 72.3 6.5 85 154-263 5-91 (297)
68 3vov_A Glucokinase, hexokinase 97.5 0.0001 3.6E-09 71.9 6.5 90 154-264 2-93 (302)
69 3epq_A Putative fructokinase; 97.5 0.0002 6.9E-09 69.9 8.0 65 25-117 4-68 (302)
70 3h1q_A Ethanolamine utilizatio 97.4 0.0015 5.1E-08 62.4 13.5 60 24-87 28-87 (272)
71 3epq_A Putative fructokinase; 97.4 0.00026 8.8E-09 69.1 7.7 84 153-264 3-92 (302)
72 2ap1_A Putative regulator prot 97.4 0.00055 1.9E-08 67.4 9.6 82 153-255 24-105 (327)
73 3mcp_A Glucokinase; structural 97.3 0.00014 4.7E-09 72.9 4.7 94 150-264 6-103 (366)
74 1woq_A Inorganic polyphosphate 97.3 0.00051 1.7E-08 65.7 8.3 86 25-129 13-103 (267)
75 2aa4_A Mannac kinase, putative 97.3 0.0003 1E-08 68.0 6.6 82 25-129 2-85 (289)
76 3mcp_A Glucokinase; structural 97.2 0.00039 1.3E-08 69.6 6.7 84 24-128 9-95 (366)
77 2e2o_A Hexokinase; acetate and 97.2 0.00041 1.4E-08 67.4 6.6 97 154-267 3-104 (299)
78 2yhx_A Hexokinase B; transfera 97.2 0.00094 3.2E-08 68.7 9.5 74 26-108 63-141 (457)
79 2aa4_A Mannac kinase, putative 97.2 0.0003 1E-08 68.0 5.1 87 154-263 2-90 (289)
80 3lm2_A Putative kinase; struct 97.2 0.00038 1.3E-08 64.8 5.4 123 22-179 4-135 (226)
81 2gup_A ROK family protein; sug 97.1 0.00084 2.9E-08 64.9 7.8 69 26-121 6-74 (292)
82 1woq_A Inorganic polyphosphate 97.1 0.0008 2.7E-08 64.3 7.2 94 153-264 12-109 (267)
83 4ehu_A Activator of 2-hydroxyi 97.0 0.0012 4E-08 63.4 7.6 116 25-178 2-117 (276)
84 1zbs_A Hypothetical protein PG 97.0 0.00073 2.5E-08 65.4 6.1 68 26-107 2-69 (291)
85 2gup_A ROK family protein; sug 96.9 0.0011 3.8E-08 64.1 6.5 79 154-259 5-85 (292)
86 3mdq_A Exopolyphosphatase; str 96.8 0.0033 1.1E-07 61.5 9.2 147 25-188 5-164 (315)
87 1bdg_A Hexokinase; phosphotran 96.8 0.0042 1.4E-07 63.8 10.2 75 25-107 69-145 (451)
88 3djc_A Type III pantothenate k 96.8 0.0018 6E-08 61.7 6.9 65 26-108 4-68 (266)
89 1sz2_A Glucokinase, glucose ki 96.7 0.0016 5.3E-08 64.4 5.6 78 24-128 14-91 (332)
90 1cza_N Hexokinase type I; stru 96.7 0.0034 1.2E-07 70.3 8.8 73 26-107 80-158 (917)
91 1saz_A Probable butyrate kinas 96.6 0.0012 4.2E-08 66.5 4.5 71 25-107 3-76 (381)
92 1zxo_A Conserved hypothetical 96.6 0.0004 1.4E-08 67.3 0.7 66 26-107 2-67 (291)
93 1zbs_A Hypothetical protein PG 96.6 0.0031 1.1E-07 61.0 6.9 68 155-236 2-69 (291)
94 3lm2_A Putative kinase; struct 96.6 0.001 3.5E-08 61.8 3.2 82 149-260 2-86 (226)
95 2q2r_A Glucokinase 1, putative 96.5 0.0023 8E-08 64.2 5.5 84 24-129 29-115 (373)
96 1sz2_A Glucokinase, glucose ki 96.4 0.008 2.7E-07 59.2 8.7 80 151-257 12-91 (332)
97 2q2r_A Glucokinase 1, putative 96.4 0.0043 1.5E-07 62.2 6.4 84 152-258 28-115 (373)
98 2yhx_A Hexokinase B; transfera 96.2 0.013 4.4E-07 60.2 9.3 77 153-236 61-140 (457)
99 3cer_A Possible exopolyphospha 96.1 0.017 5.7E-07 57.2 9.2 151 25-187 17-184 (343)
100 3o8m_A Hexokinase; rnaseh-like 96.1 0.019 6.4E-07 59.2 9.7 59 25-87 81-140 (485)
101 3zyy_X Iron-sulfur cluster bin 96.1 0.015 5.2E-07 61.6 9.2 92 24-115 206-310 (631)
102 4ehu_A Activator of 2-hydroxyi 96.0 0.015 5.1E-07 55.5 8.3 65 154-236 2-66 (276)
103 1u6z_A Exopolyphosphatase; alp 96.0 0.026 8.9E-07 59.0 10.6 153 21-188 8-170 (513)
104 3zyy_X Iron-sulfur cluster bin 96.0 0.011 3.9E-07 62.6 7.6 84 152-235 205-298 (631)
105 1cza_N Hexokinase type I; stru 95.9 0.017 5.8E-07 64.7 9.2 75 25-107 527-604 (917)
106 1zxo_A Conserved hypothetical 95.9 0.001 3.5E-08 64.4 -1.0 67 154-236 1-67 (291)
107 1t6c_A Exopolyphosphatase; alp 95.8 0.048 1.6E-06 53.2 10.7 149 25-188 13-171 (315)
108 2h3g_X Biosynthetic protein; p 95.7 0.024 8.2E-07 53.9 8.1 64 26-106 2-65 (268)
109 4a2a_A Cell division protein F 95.7 0.039 1.4E-06 56.1 10.0 79 22-106 6-86 (419)
110 3bex_A Type III pantothenate k 95.7 0.013 4.5E-07 55.2 5.9 62 26-107 5-66 (249)
111 1bdg_A Hexokinase; phosphotran 95.6 0.041 1.4E-06 56.4 9.7 74 153-236 68-145 (451)
112 3djc_A Type III pantothenate k 95.4 0.022 7.6E-07 54.0 6.5 65 154-236 3-67 (266)
113 1saz_A Probable butyrate kinas 95.3 0.0099 3.4E-07 59.8 3.7 81 153-249 2-85 (381)
114 3h1q_A Ethanolamine utilizatio 94.5 0.071 2.4E-06 50.5 7.3 60 151-214 26-85 (272)
115 4a2a_A Cell division protein F 93.8 0.27 9.3E-06 49.8 10.4 79 151-235 6-86 (419)
116 2ivn_A O-sialoglycoprotein end 93.7 0.16 5.5E-06 49.7 8.2 74 25-105 2-76 (330)
117 3o8m_A Hexokinase; rnaseh-like 93.5 0.2 6.9E-06 51.5 8.7 60 153-216 80-140 (485)
118 3hi0_A Putative exopolyphospha 93.4 0.11 3.9E-06 54.0 6.9 145 25-188 16-173 (508)
119 2h3g_X Biosynthetic protein; p 93.4 0.095 3.3E-06 49.7 5.7 64 155-235 2-65 (268)
120 3bex_A Type III pantothenate k 93.3 0.058 2E-06 50.7 4.0 62 154-235 4-65 (249)
121 3hm8_A Hexokinase-3; glucose, 92.8 0.34 1.1E-05 49.2 9.1 57 26-87 61-117 (445)
122 3f9m_A Glucokinase; hexokinase 91.2 0.44 1.5E-05 48.7 7.8 59 25-87 78-141 (470)
123 3mdq_A Exopolyphosphatase; str 91.0 0.42 1.4E-05 46.4 7.2 80 151-235 2-85 (315)
124 2ych_A Competence protein PILM 91.0 0.38 1.3E-05 47.8 7.1 58 152-212 12-71 (377)
125 3sk3_A Acetate kinase, acetoki 90.4 0.089 3E-06 52.7 1.8 33 21-53 16-48 (415)
126 3eno_A Putative O-sialoglycopr 90.1 0.64 2.2E-05 45.5 7.7 75 24-105 6-81 (334)
127 2ych_A Competence protein PILM 89.7 0.48 1.6E-05 47.0 6.5 72 24-106 13-86 (377)
128 2ivn_A O-sialoglycoprotein end 88.7 0.73 2.5E-05 45.0 6.9 73 154-233 2-75 (330)
129 3r9p_A ACKA; ssgcid, seattle s 88.0 1.3 4.4E-05 43.9 8.0 30 26-55 14-43 (391)
130 4ijn_A Acetate kinase, acetoki 88.0 1.3 4.5E-05 43.9 8.1 29 25-53 24-52 (398)
131 3hm8_A Hexokinase-3; glucose, 87.9 2 6.9E-05 43.5 9.6 73 154-235 60-134 (445)
132 3cet_A Conserved archaeal prot 87.6 0.61 2.1E-05 45.2 5.3 30 26-57 2-31 (334)
133 3t69_A Putative 2-dehydro-3-de 87.0 0.54 1.9E-05 45.6 4.6 32 24-56 7-38 (330)
134 1t6c_A Exopolyphosphatase; alp 85.4 1.1 3.8E-05 43.4 6.0 76 154-235 13-93 (315)
135 3nuw_A 2-OXO-3-deoxygalactonat 84.9 0.99 3.4E-05 43.1 5.2 38 149-188 2-39 (295)
136 3t69_A Putative 2-dehydro-3-de 84.0 0.89 3E-05 44.1 4.5 37 149-186 3-39 (330)
137 3cer_A Possible exopolyphospha 83.8 1.5 5.3E-05 42.9 6.2 77 153-235 16-98 (343)
138 1u6z_A Exopolyphosphatase; alp 82.6 1.2 4.1E-05 46.3 5.2 79 153-236 11-93 (513)
139 3f9m_A Glucokinase; hexokinase 82.4 2.1 7.1E-05 43.7 6.7 76 153-235 77-158 (470)
140 3cj1_A Ectonucleoside triphosp 81.3 0.88 3E-05 46.5 3.5 81 24-107 34-121 (456)
141 3nuw_A 2-OXO-3-deoxygalactonat 80.6 1.7 5.7E-05 41.5 4.9 32 24-57 6-37 (295)
142 3r6m_A YEAZ, resuscitation pro 79.5 2.6 8.8E-05 38.3 5.6 64 25-107 3-66 (213)
143 3khy_A Propionate kinase; csgi 79.5 1.7 6E-05 42.8 4.7 30 25-54 3-32 (384)
144 2e1z_A Propionate kinase; TDCD 78.5 2 6.7E-05 43.0 4.8 33 24-56 18-50 (415)
145 4ep4_A Crossover junction endo 77.9 10 0.00035 32.7 8.7 54 25-87 2-61 (166)
146 2iir_A Acetate kinase; transfe 77.7 2 6.8E-05 42.8 4.6 32 25-56 2-33 (403)
147 2f9w_A Pantothenate kinase; CO 77.6 2.4 8.1E-05 40.1 4.9 30 26-56 25-54 (271)
148 3hi0_A Putative exopolyphospha 76.1 2.9 0.0001 43.3 5.6 78 154-236 16-97 (508)
149 1nbw_A Glycerol dehydratase re 75.5 3 0.0001 43.2 5.3 55 24-82 2-58 (607)
150 2ews_A Pantothenate kinase; PA 75.5 1.6 5.3E-05 41.7 3.1 92 403-496 129-227 (287)
151 3en9_A Glycoprotease, O-sialog 74.9 10 0.00034 39.5 9.4 74 24-105 6-80 (540)
152 3cqy_A Anhydro-N-acetylmuramic 74.8 3.6 0.00012 40.5 5.5 81 21-107 2-101 (370)
153 3aap_A Ectonucleoside triphosp 74.6 5.9 0.0002 38.9 7.1 76 25-107 4-82 (353)
154 3bzc_A TEX; helix-turn-helix, 73.5 4.7 0.00016 43.8 6.5 29 25-54 330-359 (785)
155 2ews_A Pantothenate kinase; PA 72.9 2.3 7.9E-05 40.5 3.5 25 25-51 21-45 (287)
156 3eno_A Putative O-sialoglycopr 72.9 4.5 0.00015 39.4 5.7 76 152-234 5-81 (334)
157 4gni_A Putative heat shock pro 71.8 1.8 6.2E-05 43.3 2.7 21 25-47 14-34 (409)
158 3cet_A Conserved archaeal prot 71.5 2.6 9E-05 40.8 3.6 31 155-187 2-32 (334)
159 3sk3_A Acetate kinase, acetoki 70.6 5.2 0.00018 40.0 5.6 32 149-180 15-46 (415)
160 2f9w_A Pantothenate kinase; CO 70.5 5.2 0.00018 37.7 5.3 32 151-183 21-52 (271)
161 3qfu_A 78 kDa glucose-regulate 70.4 1.7 5.9E-05 43.0 2.1 19 25-43 19-37 (394)
162 3cj1_A Ectonucleoside triphosp 69.2 1.3 4.3E-05 45.3 0.8 63 148-214 29-99 (456)
163 2gel_A Putative GRAM negative 69.0 13 0.00046 33.8 7.8 63 25-106 2-64 (231)
164 3i33_A Heat shock-related 70 k 68.5 2.2 7.4E-05 42.6 2.4 19 25-43 24-42 (404)
165 2a6a_A Hypothetical protein TM 67.9 8.4 0.00029 34.9 6.0 67 25-110 13-79 (218)
166 1xho_A Chorismate mutase; sout 67.6 6.5 0.00022 32.8 4.6 38 67-107 43-80 (148)
167 1vhx_A Putative holliday junct 65.5 7 0.00024 33.2 4.7 24 25-49 4-27 (150)
168 1nbw_A Glycerol dehydratase re 64.6 5.6 0.00019 41.2 4.4 55 153-211 2-58 (607)
169 4gni_A Putative heat shock pro 63.6 3.6 0.00012 41.1 2.9 26 150-177 10-35 (409)
170 3psf_A Transcription elongatio 63.3 8.8 0.0003 43.0 6.1 30 24-54 519-553 (1030)
171 3r9p_A ACKA; ssgcid, seattle s 62.3 14 0.00048 36.5 6.7 28 155-182 14-41 (391)
172 4ijn_A Acetate kinase, acetoki 61.5 21 0.00072 35.3 7.8 27 155-181 25-51 (398)
173 1hjr_A Holliday junction resol 61.3 33 0.0011 29.2 8.2 53 25-87 2-57 (158)
174 1dbf_A Protein (chorismate mut 61.0 8.2 0.00028 31.5 4.0 38 67-107 14-51 (127)
175 3zx3_A Ectonucleoside triphosp 61.0 5.8 0.0002 40.3 3.8 81 24-107 34-121 (452)
176 2iir_A Acetate kinase; transfe 61.0 10 0.00035 37.7 5.5 30 154-183 2-31 (403)
177 3zx3_A Ectonucleoside triphosp 59.2 1.8 6.3E-05 43.9 -0.2 65 148-215 29-100 (452)
178 3r6m_A YEAZ, resuscitation pro 58.5 25 0.00086 31.6 7.3 62 154-234 3-64 (213)
179 1yuw_A Heat shock cognate 71 k 58.3 4.5 0.00015 42.4 2.6 25 152-176 192-216 (554)
180 3qbx_A Anhydro-N-acetylmuramic 58.0 15 0.0005 36.1 6.0 77 25-107 3-97 (371)
181 2gel_A Putative GRAM negative 57.5 27 0.00094 31.7 7.5 62 154-234 2-63 (231)
182 1ufy_A Chorismate mutase; shik 57.1 11 0.00037 30.6 4.0 38 67-107 13-51 (122)
183 2d0o_A DIOL dehydratase-reacti 56.0 25 0.00086 36.4 7.5 67 24-101 2-71 (610)
184 4h0p_A Acetate kinase; askha ( 54.1 14 0.00046 37.1 5.1 31 24-54 6-36 (438)
185 1g99_A Acetate kinase; alpha/b 53.8 14 0.00048 36.7 5.1 31 26-56 3-33 (408)
186 3bzc_A TEX; helix-turn-helix, 53.6 19 0.00063 39.2 6.5 32 151-183 327-359 (785)
187 3psi_A Transcription elongatio 52.1 17 0.00059 41.5 6.1 30 24-54 516-550 (1219)
188 3qfu_A 78 kDa glucose-regulate 51.0 6.2 0.00021 38.9 2.1 19 153-171 18-36 (394)
189 3d2f_A Heat shock protein homo 50.4 6.7 0.00023 42.1 2.4 25 152-176 196-220 (675)
190 4h0p_A Acetate kinase; askha ( 50.2 18 0.0006 36.3 5.1 30 152-181 5-34 (438)
191 3en9_A Glycoprotease, O-sialog 49.5 34 0.0012 35.4 7.6 74 153-234 6-80 (540)
192 3khy_A Propionate kinase; csgi 49.2 23 0.00078 34.8 5.7 28 154-181 3-30 (384)
193 3cqy_A Anhydro-N-acetylmuramic 48.6 34 0.0012 33.5 6.9 81 150-236 2-101 (370)
194 1iv0_A Hypothetical protein; r 45.6 32 0.0011 26.7 5.1 21 26-47 3-23 (98)
195 4gib_A Beta-phosphoglucomutase 45.4 5.3 0.00018 36.5 0.6 22 28-50 10-39 (250)
196 2zgy_A Plasmid segregation pro 45.1 12 0.00041 35.8 3.1 23 26-49 2-24 (320)
197 1dkg_D Molecular chaperone DNA 45.0 8.2 0.00028 37.9 1.9 18 26-43 4-21 (383)
198 1yuw_A Heat shock cognate 71 k 44.8 8.7 0.0003 40.2 2.1 19 154-172 5-23 (554)
199 1jce_A ROD shape-determining p 43.9 10 0.00034 36.7 2.3 25 153-179 147-171 (344)
200 3i33_A Heat shock-related 70 k 43.4 11 0.00039 37.2 2.7 22 154-177 24-45 (404)
201 2e1z_A Propionate kinase; TDCD 43.2 27 0.00094 34.7 5.3 32 152-183 17-48 (415)
202 1dkg_D Molecular chaperone DNA 43.1 8 0.00027 38.0 1.5 21 154-176 3-23 (383)
203 3aap_A Ectonucleoside triphosp 42.9 14 0.00049 36.0 3.3 21 153-173 3-23 (353)
204 4ep4_A Crossover junction endo 42.8 77 0.0026 27.1 7.5 22 154-176 2-23 (166)
205 4b9q_A Chaperone protein DNAK; 42.5 15 0.0005 38.9 3.5 22 152-173 187-208 (605)
206 2a6a_A Hypothetical protein TM 41.9 54 0.0018 29.5 6.7 65 152-235 11-75 (218)
207 1g99_A Acetate kinase; alpha/b 41.7 29 0.001 34.5 5.2 30 154-183 2-31 (408)
208 4b9q_A Chaperone protein DNAK; 41.5 15 0.0005 38.9 3.3 18 154-171 3-20 (605)
209 3qbx_A Anhydro-N-acetylmuramic 39.8 23 0.00078 34.8 4.1 78 153-236 2-97 (371)
210 4gib_A Beta-phosphoglucomutase 39.6 6.4 0.00022 36.0 0.1 22 156-178 9-38 (250)
211 3psf_A Transcription elongatio 39.4 39 0.0013 37.9 6.4 31 152-183 518-553 (1030)
212 2d0o_A DIOL dehydratase-reacti 39.0 80 0.0028 32.7 8.0 66 153-229 2-70 (610)
213 3d2f_A Heat shock protein homo 36.1 15 0.00053 39.3 2.4 18 155-172 4-21 (675)
214 2v7y_A Chaperone protein DNAK; 36.1 18 0.00063 37.2 2.9 24 152-175 160-183 (509)
215 2zgy_A Plasmid segregation pro 35.9 28 0.00095 33.2 4.1 23 155-178 2-24 (320)
216 1dw0_A Cytochrome C; asparagin 35.9 13 0.00043 29.9 1.3 33 294-330 78-111 (112)
217 1vhx_A Putative holliday junct 35.8 22 0.00075 30.0 2.9 24 154-178 4-27 (150)
218 1jce_A ROD shape-determining p 35.1 16 0.00054 35.2 2.1 17 154-170 4-20 (344)
219 2kho_A Heat shock protein 70; 35.0 19 0.00064 38.0 2.8 21 152-172 187-207 (605)
220 2v7y_A Chaperone protein DNAK; 33.6 21 0.0007 36.8 2.8 19 154-172 3-21 (509)
221 3psi_A Transcription elongatio 32.5 95 0.0032 35.5 8.1 31 152-183 515-550 (1219)
222 2kho_A Heat shock protein 70; 31.4 23 0.00077 37.4 2.8 17 155-171 4-20 (605)
223 2fsj_A Hypothetical protein TA 30.9 19 0.00067 34.9 2.0 24 153-176 190-213 (346)
224 1nu0_A Hypothetical protein YQ 29.3 47 0.0016 27.5 3.8 22 25-47 4-25 (138)
225 1xho_A Chorismate mutase; sout 27.6 67 0.0023 26.8 4.3 36 197-235 44-79 (148)
226 1hjr_A Holliday junction resol 27.4 2.3E+02 0.008 23.8 8.0 21 155-176 3-23 (158)
227 1k8k_A ARP3, actin-like protei 26.6 27 0.00091 34.7 2.2 17 27-43 8-24 (418)
228 4apw_A ALP12; actin-like prote 25.5 31 0.0011 33.2 2.3 21 149-169 3-23 (329)
229 4apw_A ALP12; actin-like prote 24.8 32 0.0011 33.0 2.3 25 152-178 171-195 (329)
230 1mzp_A 50S ribosomal protein L 24.8 1.1E+02 0.0037 27.5 5.7 48 64-115 170-217 (217)
231 4h0o_A Acetate kinase; askha ( 24.5 78 0.0027 31.2 4.9 27 25-53 15-41 (404)
232 1nu0_A Hypothetical protein YQ 22.2 83 0.0029 26.0 4.1 22 154-176 4-25 (138)
233 1dbf_A Protein (chorismate mut 22.1 78 0.0027 25.7 3.7 36 197-235 15-50 (127)
234 2ov7_A 50S ribosomal protein L 22.1 1.9E+02 0.0065 23.8 6.2 80 34-115 56-135 (137)
235 1k8k_A ARP3, actin-like protei 21.0 37 0.0013 33.6 1.9 20 152-171 4-23 (418)
236 2i7n_A Pantothenate kinase 1; 20.0 1.3E+02 0.0045 29.2 5.5 93 403-496 195-296 (360)
No 1
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.6e-63 Score=530.37 Aligned_cols=343 Identities=42% Similarity=0.761 Sum_probs=298.5
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
.++|+||||+||||+|++|||.+ |++++..+.+++..+|++||.||||++||+++++++++++++ .++++.+|.+|
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~~-G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~---~~~~~~~I~aI 77 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDHD-ANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAI 77 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECTT-CCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEE
T ss_pred CceEEEEEEccccceeeeEEcCC-CCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhhEEEE
Confidence 46899999999999999999975 999999999999999999999999999999999999999886 46778899999
Q ss_pred EEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRA 310 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 310 (500)
||++|++++|+||+++|+|++|+|+|+|.|+.++++++.+... .+.+++.||.+++++++++||+|+++|+|+++++
T Consensus 78 gis~q~~~~v~~D~~~G~pl~~ai~W~D~R~~~~~~~l~~~~~---~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~~~~~ 154 (526)
T 3ezw_A 78 GITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGL---EDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRER 154 (526)
T ss_dssp EEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHHH
T ss_pred EEeCCCCCEEEEECCCCeEcccceecCCcchHHHHHHHHhhcc---HHHHHHHhCCCCCcccHHHHHHHHHHcCchHHHH
Confidence 9999999999999756999999999999999999999998765 3678899999999999999999999999999999
Q ss_pred hhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC----
Q psy9709 311 IKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN---- 386 (500)
Q Consensus 311 ~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~---- 386 (500)
+++....+..+.+||.|+|||.+..++|+|+|++|++||+++++|++++++.+||+.++||+++++++++|.+...
T Consensus 155 ~~~~~~~~~~i~~~L~~~Lt~g~~~~td~s~As~t~l~d~~~~~w~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~~~ 234 (526)
T 3ezw_A 155 ARRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGG 234 (526)
T ss_dssp HHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTTS
T ss_pred HHHhhhhccchhHHHhhhhcCCCceEEEchhhccccCcCccccCcCHHHHHHcCCCHHHCCCccccccccCccchhhhcC
Confidence 9843344677889999999964567899999999999999999999999999999999999999999999985432
Q ss_pred Ccce------------------------------EEEEEeecC-----------------CCCceeeechhhhchhHHHH
Q psy9709 387 NGLV------------------------------TTVAYQFGP-----------------DATPIYALEGSIAVAGAAVK 419 (500)
Q Consensus 387 ~G~~------------------------------~~~~~~~~~-----------------~~p~~~~~~g~~~~~G~~~~ 419 (500)
.|+. ..+....+. ..++.|.++|+++++|.+++
T Consensus 235 ~gipV~~g~gD~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~eg~~~~~G~~~~ 314 (526)
T 3ezw_A 235 TRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQ 314 (526)
T ss_dssp CCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHH
T ss_pred CCCcEEEEcchHHHHhhhccccccceeEEEeccCeeEecccCCccccccccceeeeeeccCCcceeeeHHHHHHHHHHHH
Confidence 1111 001111110 11346889999999999999
Q ss_pred HHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q psy9709 420 WLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILEL 499 (500)
Q Consensus 420 w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~~ 499 (500)
||++.++........+..+...++++|++|+|||.|+|+|+|||++||+|+||+..|+++||+||++||+||.+|+++|.
T Consensus 315 Wl~~~~~~~~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i~RAvlEgia~~~r~~le~ 394 (526)
T 3ezw_A 315 WLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEA 394 (526)
T ss_dssp HHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccchhHHHHHHhccCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999976544344455566667999999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q psy9709 500 Y 500 (500)
Q Consensus 500 ~ 500 (500)
|
T Consensus 395 l 395 (526)
T 3ezw_A 395 M 395 (526)
T ss_dssp H
T ss_pred H
Confidence 4
No 2
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.4e-63 Score=524.94 Aligned_cols=345 Identities=43% Similarity=0.703 Sum_probs=297.0
Q ss_pred cccCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 149 QTQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 228 (500)
Q Consensus 149 ~~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~ 228 (500)
+||++|++|||+|||++|++++|.+ |+++...+.+++..+|++||.+||+++||+++++++++++++ .++++.+|.
T Consensus 22 ~MM~~~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~I~ 97 (520)
T 4e1j_A 22 SMMGGYILAIDQGTTSTRAIVFDGN-QKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEK---SGITANDIA 97 (520)
T ss_dssp CCCSCEEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEE
T ss_pred HHhhCeEEEEEeCCcceEEEEECCC-CCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEE
Confidence 3567899999999999999999985 999999999999888999999999999999999999999864 456677899
Q ss_pred EEEEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHH
Q psy9709 229 TLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVR 308 (500)
Q Consensus 229 ~I~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~ 308 (500)
+|||+++++++++||+++|+|++|++.|+|.|+.++++++.+... .+++++.||.++++.++++||+|+++|+||+|
T Consensus 98 ~Igis~~g~~~v~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe~~ 174 (520)
T 4e1j_A 98 AIGITNQRETVVVWDRETGKPIHNAIVWQDRRTAAFCDKLKKKGL---EKTFVKKTGLLLDPYFSGTKLNWLLSNVKGAQ 174 (520)
T ss_dssp EEEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHSSCSSTTSHHHHHHHHHHHSTTHH
T ss_pred EEEEeCCcceEEEEECCCCeECccccccccCCHHHHHHHHHhccc---HHHHHHHHCCCCCchhHHHHHHHHHHcChHHH
Confidence 999999999999999437999999999999999999999998754 36789999999999999999999999999999
Q ss_pred HHhhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC--
Q psy9709 309 RAIKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN-- 386 (500)
Q Consensus 309 ~~~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~-- 386 (500)
++++++...|++++|||.|+|||...+++|+|+|++|+|||+++++|++++|+.+||+.++||+|+++++++|.+...
T Consensus 175 ~~~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~l 254 (520)
T 4e1j_A 175 VRAAKGELCFGTIDTFLIWRLTGGECFCTDATNASRTLLYNIAENAWDDELTEVLRVPKEMLPEVKDCAADFGVTDPSLF 254 (520)
T ss_dssp HHHHTTCEEEEEHHHHHHHHHTTTCCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGSCEEECSBSCCCBCCHHHH
T ss_pred HHHhcCCeEecCHHHHHHHHhcCCCeeeecHHHhhhhcccccccCCCCHHHHHHcCCCHHHCCceecCCCceeeeChhhC
Confidence 998732345778999999999941148999999999999999999999999999999999999999999999984320
Q ss_pred ------------------------C-------cceEEEEEeecC---------------CC--CceeeechhhhchhHHH
Q psy9709 387 ------------------------N-------GLVTTVAYQFGP---------------DA--TPIYALEGSIAVAGAAV 418 (500)
Q Consensus 387 ------------------------~-------G~~~~~~~~~~~---------------~~--p~~~~~~g~~~~~G~~~ 418 (500)
. |....+....+. .. ++.|.++|+++++|.++
T Consensus 255 ~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~ 334 (520)
T 4e1j_A 255 GAAIPILGVAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAV 334 (520)
T ss_dssp TSCCBEEEECCHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHH
T ss_pred CCCCeEEEECCcHHHHHHhCCCCCCCcEEEEecCchheEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhHHHHH
Confidence 0 111111111110 01 23688899999999999
Q ss_pred HHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9709 419 KWLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILE 498 (500)
Q Consensus 419 ~w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~ 498 (500)
+|+++.++...+|++++++++++|++++++|+|||.|+|+|+|||++||+|+|++.+|+++||+||++||+||.+|+++|
T Consensus 335 ~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~l~ 414 (520)
T 4e1j_A 335 QWLRDGLKVIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQTRDLLE 414 (520)
T ss_dssp HHHHHTTCCC-----CHHHHHTSCTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCcccHHHHHHHHhcCCCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997666788999999988999999999999999999999999999999999999999999999999999999998
Q ss_pred hC
Q psy9709 499 LY 500 (500)
Q Consensus 499 ~~ 500 (500)
.|
T Consensus 415 ~l 416 (520)
T 4e1j_A 415 AM 416 (520)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 3
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=2.8e-63 Score=525.99 Aligned_cols=336 Identities=23% Similarity=0.279 Sum_probs=294.7
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
.++|++|||+|||++|+++||.+ |+++...+.+++...|++||.+|||++||+++++++++++++ .+++..+|.+|
T Consensus 5 ~~~~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~I~~I 80 (508)
T 3ifr_A 5 QGRQVIGLDIGTTSTIAILVRLP-DTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTT---AGESDWRPGGI 80 (508)
T ss_dssp --CEEEEEEECSSEEEEEEEETT-TEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HCGGGCCEEEE
T ss_pred cCCEEEEEEecCcceEEEEECCC-CCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHh---cCCChhheEEE
Confidence 45799999999999999999975 999999999999889999999999999999999999999875 35566889999
Q ss_pred EEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRA 310 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 310 (500)
||++|++++++||+ +|+|++|+|.|+|.|+.++++++.+..+. +++++.||.++++.++++||+|+++|+||+|++
T Consensus 81 gis~~~~~~v~~D~-~G~~l~~~i~W~D~R~~~~~~~l~~~~~~---~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 156 (508)
T 3ifr_A 81 CVTGMLPAVVLLDD-RGAVLRPSIQQSDGRCGDEVAELRAEVDS---EAFLARTGNGVTQQLVTAKLRWIERHEPAVFGA 156 (508)
T ss_dssp EEEECSSCBEEECT-TSCBCSCEECTTCCCCHHHHHHHHHHSCH---HHHHHHHSSCSSTTSHHHHHHHHHHHCHHHHHT
T ss_pred EEECCCCcEEEECC-CCCCcccceeccccChHHHHHHHHhhccH---HHHHHHHCCCCChhhHHHHHHHHHHcCHHHHHH
Confidence 99999999999999 69999999999999999999999998763 678899999999999999999999999999999
Q ss_pred hhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC----
Q psy9709 311 IKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN---- 386 (500)
Q Consensus 311 ~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~---- 386 (500)
++ +|++++|||.|+|| |+.++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+.+.
T Consensus 157 ~~----~~l~~~dyl~~~LT--G~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~ 230 (508)
T 3ifr_A 157 IA----TVCGSYDYINMLLT--GERVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAAL 230 (508)
T ss_dssp CS----EEECHHHHHHHHHH--CCCCEEHHHHHHHTCEETTTTEECHHHHHTTTSCGGGSCCEECTTSEEEECCHHHHHH
T ss_pred Hh----hhcCchHHHHHHhc--CCccccHhHhhcccCccCccCCCCHHHHHHcCCCHHHCCCCcCCCCeeeccCHHHHHH
Confidence 87 89999999999999 779999999999999999999999999999999999999999999999985321
Q ss_pred Cc----------------------------------ceEEEEEee------------cCCCCceeeechhhhchhHHHHH
Q psy9709 387 NG----------------------------------LVTTVAYQF------------GPDATPIYALEGSIAVAGAAVKW 420 (500)
Q Consensus 387 ~G----------------------------------~~~~~~~~~------------~~~~p~~~~~~g~~~~~G~~~~w 420 (500)
.| ....+.... ....|+.|.++|+++++|.+++|
T Consensus 231 ~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W 310 (508)
T 3ifr_A 231 TGLPTGLPVYGGAADHIASALAAGITRPGDVLLKFGGAGDIIVASATAKSDPRLYLDYHLVPGLYAPNGCMAATGSALNW 310 (508)
T ss_dssp HCCCTTCEEECCEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECBSCCCCBTTBBCCBCSSTTCBCCEEEESSSHHHHHH
T ss_pred hCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEechhhhheeeCCCcccCCCcceeeeecCCceEEechhhhhHHHHHH
Confidence 01 001111111 11237889999999999999999
Q ss_pred HHHHcCC-CC--CHHHHHHHHHhcC-CCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9709 421 LRDNLNL-MD--NVRETESLAEKVM-TTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDI 496 (500)
Q Consensus 421 ~~~~~~~-~~--~~~~l~~~~~~~~-~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~ 496 (500)
+++.|.. .. +|+++++++++.+ +++|++|+|||.|||+|+|||++||+|+|++..|+++||+||++||+||.+|++
T Consensus 311 ~~~~~~~~~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~ 390 (508)
T 3ifr_A 311 LAKLLAPEAGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHH 390 (508)
T ss_dssp HHHHHSTTCTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC----CCCCCCEEESCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999842 12 5889999888765 999999999999999999999999999999999999999999999999999999
Q ss_pred HHhC
Q psy9709 497 LELY 500 (500)
Q Consensus 497 ~~~~ 500 (500)
+|.|
T Consensus 391 ~~~l 394 (508)
T 3ifr_A 391 VAVL 394 (508)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 4
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=1e-62 Score=521.27 Aligned_cols=333 Identities=24% Similarity=0.370 Sum_probs=293.3
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
+++|++|||+|||++|+++||.+ |+++...+.+++..+|++||.|||+++||+++++++++++++ .+ .+|.+|
T Consensus 2 ~m~~~lgIDiGtts~K~~l~d~~-G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~---~~I~~I 74 (504)
T 3ll3_A 2 SLKYIIGMDVGTTATKGVLYDIN-GKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQK---ID---GKIAAI 74 (504)
T ss_dssp CCEEEEEEEECSSEEEEEEEETT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---CS---SEEEEE
T ss_pred CCCEEEEEEecCCceEEEEEcCC-CCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHh---CC---CCeEEE
Confidence 35699999999999999999985 999999999999889999999999999999999999998864 22 679999
Q ss_pred EEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRA 310 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 310 (500)
||++|++++++||+ +|+|++|+|+|+|.|+.++++++.+..+ .+++++.||.++++.++++||+|+++|+||+|++
T Consensus 75 gis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe~~~~ 150 (504)
T 3ll3_A 75 SWSSQMHSLIGLGS-DDELLTNSITWADNCAKSIVQDAKNRGF---AQQIYRKTGMPMHPMAPIYKLLWLKNKKTEVFSQ 150 (504)
T ss_dssp EEEECSSCBEEECT-TSCBSSCEECTTCCTTHHHHHHHHHHTH---HHHHHHHHCCCSCTTSHHHHHHHHHHHCHHHHHH
T ss_pred EEECCCCcEEEECC-CCCCcccceeCCccCHHHHHHHHHhccC---HHHHHHHHCCCCCcccHHHHHHHHHHcChHHHHH
Confidence 99999999999999 7999999999999999999999998764 3678999999999999999999999999999999
Q ss_pred hhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC----
Q psy9709 311 IKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN---- 386 (500)
Q Consensus 311 ~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~---- 386 (500)
++ +|++++|||.|+|| |+.++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+.+.
T Consensus 151 ~~----~~~~~~dyl~~~LT--G~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~ 224 (504)
T 3ll3_A 151 AQ----KWIGIKEYIIFRLT--GKLVTDTTMAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKK 224 (504)
T ss_dssp CC----EEECHHHHHHHHHH--SCCEEEHHHHTTTTCBCTTTSSBCHHHHHHHTCCGGGSCEEECTTCEECCCCHHHHHH
T ss_pred Hh----heeCHHHHHHHHHh--CCcccchhHhhcccCeeCCCCCcCHHHHHHcCCCHHHCCCeeCCcceeeccCHHHHHh
Confidence 87 89999999999999 789999999999999999999999999999999999999999999999984321
Q ss_pred Cc----------------------------------ceEEEEEeecCC-------------CCceeeechhhhchhHHHH
Q psy9709 387 NG----------------------------------LVTTVAYQFGPD-------------ATPIYALEGSIAVAGAAVK 419 (500)
Q Consensus 387 ~G----------------------------------~~~~~~~~~~~~-------------~p~~~~~~g~~~~~G~~~~ 419 (500)
.| ....+....+.. .|+.|.++|+++++|.+++
T Consensus 225 ~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~ 304 (504)
T 3ll3_A 225 LGIDSDTKIILGASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLGGPVNNGGIVFN 304 (504)
T ss_dssp HTCCTTCEEEEEEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEEEEESCSHHHHH
T ss_pred cCCCcCCCEEEEccHHHHHHHhCCCCCCCcEEEEechhhhheeeCCCcccCCCCceEEEEeCCCeEEEEeehhhHHHHHH
Confidence 01 001111111100 1467889999999999999
Q ss_pred HHHHHcCCC-CCHHHHHHHHHhcC-CCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q psy9709 420 WLRDNLNLM-DNVRETESLAEKVM-TTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDIL 497 (500)
Q Consensus 420 w~~~~~~~~-~~~~~l~~~~~~~~-~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~ 497 (500)
|+++.+... ..++.+.++++++| ++++++|+|||.|+|+|+|||++||+|+|++..|+++||+||++||+||.+|+++
T Consensus 305 W~~~~~~~~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~ 384 (504)
T 3ll3_A 305 WARQTLFDADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEMARAVIEGIIFNLYDAA 384 (504)
T ss_dssp HHHHHHTCTTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccchhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999988643 23454444777776 8999999999999999999999999999999999999999999999999999999
Q ss_pred HhC
Q psy9709 498 ELY 500 (500)
Q Consensus 498 ~~~ 500 (500)
|.|
T Consensus 385 ~~l 387 (504)
T 3ll3_A 385 SNL 387 (504)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 5
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=3.8e-63 Score=525.41 Aligned_cols=335 Identities=22% Similarity=0.223 Sum_probs=298.2
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
|++|++|||+|||++|+++||.+ |+++...+.+++...+++||.+||+++||+++++++++++ + .+++..+|.+|
T Consensus 3 mm~~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~---~~~~~~~I~~I 77 (511)
T 3hz6_A 3 LAFYIATFDIGTTEVKAALADRD-GGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-Q---SGVDARRVSAI 77 (511)
T ss_dssp CCCEEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-T---TTCCGGGEEEE
T ss_pred cccEEEEEEeCCCceEEEEECCC-CCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-h---cCCChhHeEEE
Confidence 35699999999999999999985 9999999999998899999999999999999999999987 4 45667889999
Q ss_pred EEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRA 310 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 310 (500)
||++|++++++||+ +|+|++|+|+|+|.|+.++++++.+..+ .+++++.||.++++.++++||+|+++|+||+|++
T Consensus 78 gis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~ 153 (511)
T 3hz6_A 78 VLSGQMQNFLPLDQ-DHEPLHRAVLYSDKRPLKEAEEINARHG---ADNLWSALENPMTAASILPKLVFWRASFPQAFGR 153 (511)
T ss_dssp EEEECCSCBEEECT-TSCBSSCEECTTCCCCHHHHHHHHHHHC---HHHHHHHHSSCCSTTSHHHHHHHHHHHCHHHHTT
T ss_pred EEecccccEEEECC-CcCCCcCceecCCCCHHHHHHHHHhccC---HHHHHHHHCCCCCchhHHHHHHHHHHhChHHHHH
Confidence 99999999999999 6999999999999999999999998765 3678999999999999999999999999999998
Q ss_pred hhcccccccc-hhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC---
Q psy9709 311 IKENRCLFGT-VDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN--- 386 (500)
Q Consensus 311 ~~~~~~~~~~-~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~--- 386 (500)
++ +|++ ++|||.|+|| |+.++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+.+.
T Consensus 154 ~~----~~l~~~~dyl~~~LT--G~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~ 227 (511)
T 3hz6_A 154 LR----HVVLGAKDYVVLRLT--GRHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDLMPRLLEPGEQVGGVSALAAR 227 (511)
T ss_dssp CC----EEECSHHHHHHHHHH--SCCEECHHHHHHTTCEETTTTEECHHHHHHTTCCGGGSCEECCTTSEEEECCHHHHH
T ss_pred HH----HHhcCcHHHHHHHHh--CCceeeHhHhhcccceeCCCCCcCHHHHHHhCCCHHHCCCCcCCCCcccccCHHHHH
Confidence 87 8999 9999999999 789999999999999999999999999999999999999999999999984310
Q ss_pred -----------------------------------CcceEEEEEeec----------------CCCCceeeechhhhchh
Q psy9709 387 -----------------------------------NGLVTTVAYQFG----------------PDATPIYALEGSIAVAG 415 (500)
Q Consensus 387 -----------------------------------~G~~~~~~~~~~----------------~~~p~~~~~~g~~~~~G 415 (500)
.|....+....+ ...|+.|++.|+++++|
T Consensus 228 ~~Gl~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G 307 (511)
T 3hz6_A 228 QTGFVSGTPVLCGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKTLQVAPVLNAG 307 (511)
T ss_dssp HHCCCTTCEEECCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEEEEEEESSSH
T ss_pred hhCCCCCCeEEEECchHHHHHHhCCCCCCCcEEEEecchhhheeecCCeecccCCCCceEEEEEecCCceEEEeehhhHH
Confidence 011111111111 12356666668899999
Q ss_pred HHHHHHHHHcC--CCCCHHHHHHHHHhcC-C---CCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHH
Q psy9709 416 AAVKWLRDNLN--LMDNVRETESLAEKVM-T---TGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAI 489 (500)
Q Consensus 416 ~~~~w~~~~~~--~~~~~~~l~~~~~~~~-~---~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egi 489 (500)
.+++|+++.++ ...+|+++++++++++ + +++++|+|||.|+|+|+||+++||+|+|++..|+++||+||++||+
T Consensus 308 ~~~~W~~~~~~~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgi 387 (511)
T 3hz6_A 308 NILQWALTLVGHRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGA 387 (511)
T ss_dssp HHHHHHGGGGTCCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHHHHHHHHHHH
Confidence 99999999987 5557899999988875 8 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC
Q psy9709 490 CFQTRDILELY 500 (500)
Q Consensus 490 a~~~~~~~~~~ 500 (500)
||.+|++++.|
T Consensus 388 a~~~~~~~~~l 398 (511)
T 3hz6_A 388 ALSLRWCAELL 398 (511)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999864
No 6
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=1.1e-62 Score=521.56 Aligned_cols=343 Identities=40% Similarity=0.723 Sum_probs=300.4
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
.++|++|||+|||++|+++||.+ |+++...+.+++..+|++||.+||+++||+++++++++++++. ++++.+|.+|
T Consensus 3 ~~~~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~~---~~~~~~I~~I 78 (506)
T 3h3n_X 3 EKNYVMAIDQGTTSSRAIIFDRN-GKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIES---GIRPEAIAGI 78 (506)
T ss_dssp CCCEEEEEEECSSEEEEEEEETT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHH---TCCGGGEEEE
T ss_pred CCCEEEEEEcCCCceEEEEECCC-CCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHHc---CCChhheEEE
Confidence 45799999999999999999985 9999999999998899999999999999999999999998763 5666789999
Q ss_pred EEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRA 310 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 310 (500)
||++|++++++||+++|+|++|+|+|+|.|+.++++++.+... .+.+++.||.++++.++++||+|+++|+||+|++
T Consensus 79 gis~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~ 155 (506)
T 3h3n_X 79 GITNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGH---TEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEK 155 (506)
T ss_dssp EEEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHSCCCCTTSHHHHHHHHHHHSTTHHHH
T ss_pred EeeCCcccEEEEeCCCCeECCCceEecCcchHHHHHHHHhccC---HHHHHHHhCCCCCchhHHHHHHHHHHhCHHHHHH
Confidence 9999999999999934999999999999999999999998754 3678999999999999999999999999999999
Q ss_pred hhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC----
Q psy9709 311 IKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN---- 386 (500)
Q Consensus 311 ~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~---- 386 (500)
++++...|++++|||.|+|||..++++|+|+|++|+|||+++++|++++|+.+||+.++||+|+++++++|.+...
T Consensus 156 ~~~~~~~~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~lg 235 (506)
T 3h3n_X 156 ADNGELLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYG 235 (506)
T ss_dssp HHTTCEEEECHHHHHHHHHTTTSCCEEEHHHHHTTTSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCGGGTTT
T ss_pred HhcCCeEEecHHHHHHHHhcCCceeeeEHHHhhhhhCeecCCCCcCHHHHHHcCcCHHHCCceecCCCcceeeChHHhcC
Confidence 9733345888999999999941168999999999999999999999999999999999999999999999985421
Q ss_pred Ccc------------------------------eEEEEEeecC---------------CCCc--eeeechhhhchhHHHH
Q psy9709 387 NGL------------------------------VTTVAYQFGP---------------DATP--IYALEGSIAVAGAAVK 419 (500)
Q Consensus 387 ~G~------------------------------~~~~~~~~~~---------------~~p~--~~~~~g~~~~~G~~~~ 419 (500)
.|+ ...+....+. ..++ .|.++|+++++|.+++
T Consensus 236 ~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~ 315 (506)
T 3h3n_X 236 SEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVAGSAIQ 315 (506)
T ss_dssp CCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCSCCTTSEEEEEEEETTEEEEEEEEEECCSSHHHH
T ss_pred CCCeEEEECCcHHHHHHhCCCCCCCcEEEEecchheeeeecCCccccCCCceEEEeeeecCCCCEEEEecchhhHHHHHH
Confidence 111 0111111110 0133 5888999999999999
Q ss_pred HHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Q psy9709 420 WLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILEL 499 (500)
Q Consensus 420 w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~~ 499 (500)
|+++.++...+|+++++++++++..++++|+|||.|+|+|+||+++||+|+|++..|+++||+||++||+||.+|++++.
T Consensus 316 W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~ 395 (506)
T 3h3n_X 316 WLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDT 395 (506)
T ss_dssp HHHHTSCCCSSTTHHHHHHTTCCSCSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCCcHHHHHHHHhcCCCCCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999976667889999999888669999999999999999999999999999999999999999999999999999986
Q ss_pred C
Q psy9709 500 Y 500 (500)
Q Consensus 500 ~ 500 (500)
|
T Consensus 396 l 396 (506)
T 3h3n_X 396 M 396 (506)
T ss_dssp H
T ss_pred H
Confidence 4
No 7
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=1.9e-62 Score=519.49 Aligned_cols=344 Identities=41% Similarity=0.737 Sum_probs=300.9
Q ss_pred ccCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 150 TQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 229 (500)
Q Consensus 150 ~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~ 229 (500)
.|++|++|||+|||++|+++||.+ |+++...+.+++..+|++||.+||+++||+++++++++++++ .++++.+|.+
T Consensus 3 aM~~~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~I~~ 78 (501)
T 3g25_A 3 AMEKYILSIDQGTTSSRAILFNQK-GEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINE---NDVRADQIAG 78 (501)
T ss_dssp CCCCEEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEEE
T ss_pred ccccEEEEEEeCccceEEEEEcCC-CCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEE
Confidence 466799999999999999999985 999999999999889999999999999999999999999865 4566788999
Q ss_pred EEEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHH
Q psy9709 230 LGITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRR 309 (500)
Q Consensus 230 I~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~ 309 (500)
|||++|++++++||+++|+|++|++.|+|.|+.++++++.+... .+++++.||.++++.++++||+|+++|+||+|+
T Consensus 79 Igis~~~~~~v~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~ 155 (501)
T 3g25_A 79 IGITNQRETTVVWDKHTGRPIYHAIVWQSRQTQSICSELKQQGY---EQTFRDKTGLLLDPYFAGTKVKWILDNVEGARE 155 (501)
T ss_dssp EEEEECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHSCCSSTTSHHHHHHHHHHHSTTHHH
T ss_pred EEEECCcCcEEEEECCCCeECCCceeeccCChHHHHHHHHhccC---HHHHHHHHCCCCCchhHHHHHHHHHHhCHHHHH
Confidence 99999999999999933999999999999999999999998754 377899999999999999999999999999999
Q ss_pred HhhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC---
Q psy9709 310 AIKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN--- 386 (500)
Q Consensus 310 ~~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~--- 386 (500)
++++....|++++|||.|+|||..+.++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+...
T Consensus 156 ~~~~~~~l~~~~~dyl~~~LTG~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~~ 235 (501)
T 3g25_A 156 KAENGDLLFGTIDTWLVWKLSGKAAHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKASSEVYGKTIDYHFY 235 (501)
T ss_dssp HHHTTCEEEEEHHHHHHHHHTTTSCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEECCGGGTT
T ss_pred HHhcCCeEEecHHHHHHHHhcCCCeeeeeHHHhhcccCeeCCCCCCCHHHHHHhCcCHHHCCceecCCCceeccchHHhC
Confidence 99722334888999999999941179999999999999999999999999999999999999999999999986421
Q ss_pred -Ccc------------------------------eEEEEEeecC---------------CCCc--eeeechhhhchhHHH
Q psy9709 387 -NGL------------------------------VTTVAYQFGP---------------DATP--IYALEGSIAVAGAAV 418 (500)
Q Consensus 387 -~G~------------------------------~~~~~~~~~~---------------~~p~--~~~~~g~~~~~G~~~ 418 (500)
.|+ ...+....+. ..++ .|.++|+++++|.++
T Consensus 236 g~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~ 315 (501)
T 3g25_A 236 GQEVPIAGVAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGDKAVKSESGLLTTIAYGIDGKVNYALEGSIFVSGSAI 315 (501)
T ss_dssp TCCCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEETTEEEEEEEEEESCSTHHH
T ss_pred CCCCeEEEECccHHHHHHhCCCCCCCcEEEEccchhheeeecCCccccCCCCeEEEeeEecCCccEEEEecccccHHHHH
Confidence 111 0111111110 0123 688899999999999
Q ss_pred HHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9709 419 KWLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILE 498 (500)
Q Consensus 419 ~w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~ 498 (500)
+|+++.++...+|+++++++++++..++++|+|||.|+|+|+|||++||+|+|++..|+++||+||++||+||.+|++++
T Consensus 316 ~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~~ 395 (501)
T 3g25_A 316 QWLRDGLRMINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVME 395 (501)
T ss_dssp HHHHHTSCCCSSGGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCcHHHHHHHHhhCCCCCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997666788999999888877999999999999999999999999999999999999999999999999999998
Q ss_pred hC
Q psy9709 499 LY 500 (500)
Q Consensus 499 ~~ 500 (500)
.|
T Consensus 396 ~l 397 (501)
T 3g25_A 396 AM 397 (501)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 8
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.7e-62 Score=520.29 Aligned_cols=340 Identities=42% Similarity=0.762 Sum_probs=300.3
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
++|++|||+|||++|+++||.+ |++++..+.+++..+|++||.+||+++||+++++++++++++ .++++.+|.+||
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~~-G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Ig 77 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDHD-ANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAIG 77 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECTT-CCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEE
T ss_pred CcEEEEEEcCCcceEEEEECCC-CCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhheEEEE
Confidence 4689999999999999999985 999999999999889999999999999999999999999875 466678899999
Q ss_pred EcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHHh
Q psy9709 232 ITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRAI 311 (500)
Q Consensus 232 vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~ 311 (500)
|++|++++++||+++|+|++|+|.|+|.|+.++++++.+... .+.+++.||.++++.++++||+|+++|+||+|+++
T Consensus 78 is~~~~~~v~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~ 154 (510)
T 2p3r_A 78 ITNQRETTIVWEKETGKPIYNAIVWQCRRTAEICEHLKRDGL---EDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERA 154 (510)
T ss_dssp EEECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHTTC---HHHHHHHHCCCSSTTSHHHHHHHHHHHSTTHHHHH
T ss_pred EeCCcCcEEEEECCCCeECcccccccCccHHHHHHHHHhccc---HHHHHHHhCCCCCcccHHHHHHHHHHcCHHHHHHH
Confidence 999999999999934999999999999999999999998754 36789999999999999999999999999999999
Q ss_pred hcccccccchhHHHHHhhcCCC--eeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeec----
Q psy9709 312 KENRCLFGTVDTWLVWNLTGRT--CHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHS---- 385 (500)
Q Consensus 312 ~~~~~~~~~~~dyi~~~LTg~g--~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~---- 385 (500)
+++...|++++|||.|+|| | +.++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+..
T Consensus 155 ~~~~~l~~~~~dyl~~~LT--G~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~lG 232 (510)
T 2p3r_A 155 RRGELLFGTVDTWLIWKMT--QGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKG 232 (510)
T ss_dssp HTTCEEEECHHHHHHHHHT--TTSCCEEEHHHHHTTSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTT
T ss_pred hcCCeEecCHHHHHHHHhc--CCCeEEeehhHhhhhccccCccCCCCHHHHHHhCCCHHHCCceecCCCceeeechhhcC
Confidence 7222348889999999999 6 7999999999999999999999999999999999999999999999997532
Q ss_pred CCcc------------------------------eEEEEEeec---------------CCC--CceeeechhhhchhHHH
Q psy9709 386 NNGL------------------------------VTTVAYQFG---------------PDA--TPIYALEGSIAVAGAAV 418 (500)
Q Consensus 386 ~~G~------------------------------~~~~~~~~~---------------~~~--p~~~~~~g~~~~~G~~~ 418 (500)
..|+ ...+....+ ... |+.|.++|+++++|.++
T Consensus 233 ~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~ 312 (510)
T 2p3r_A 233 GTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASI 312 (510)
T ss_dssp SCCEEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHH
T ss_pred CCCCeEEEECchHHHHHHhcCCCCCCcEEEeecchheeEEecCCccccCCCCeeEEEeeecCCCceEEEccchhhHHHHH
Confidence 1111 010111110 011 34788999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy9709 419 KWLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILE 498 (500)
Q Consensus 419 ~w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~ 498 (500)
+|+++.++...+|+++++++++++++++++|+|||.|+|+|+||+++||+|+|++..|+++||+||++||+||.+|++++
T Consensus 313 ~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~ 392 (510)
T 2p3r_A 313 QWLRDEMKLINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLE 392 (510)
T ss_dssp HHHHHTSCCCCSSSCHHHHHTTSSSCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCcHHHHHHHHhhCCCCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997666788899999888889999999999999999999999999999999999999999999999999999998
Q ss_pred hC
Q psy9709 499 LY 500 (500)
Q Consensus 499 ~~ 500 (500)
.|
T Consensus 393 ~l 394 (510)
T 2p3r_A 393 AM 394 (510)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 9
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=2.3e-60 Score=503.29 Aligned_cols=338 Identities=42% Similarity=0.714 Sum_probs=297.9
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
+++++|||+|||++|++++|.+ |+++...+.+++..+|++||.+||+++||+++++++++++++. +++..+|.+||
T Consensus 2 ~~~~lgiDiGtt~~k~~l~d~~-g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~~---~~~~~~i~~Ig 77 (497)
T 2zf5_O 2 EKFVLSLDEGTTSARAIIFDRE-SNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQSA---RIEPNQIAAIG 77 (497)
T ss_dssp CCEEEEEEECSSEEEEEEECTT-CCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHH---TCCGGGEEEEE
T ss_pred CcEEEEEecCCchhEEEEECCC-CCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHhc---CCCcccEEEEE
Confidence 4689999999999999999985 9999999999998889999999999999999999999998763 45667899999
Q ss_pred EcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHHh
Q psy9709 232 ITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRAI 311 (500)
Q Consensus 232 vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~ 311 (500)
|+++++++++||+ +|+|++|+|.|+|.|+.++++++.+. . .+.+++.||.++++.++++||+|+++|+||+|+++
T Consensus 78 is~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~-~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~ 152 (497)
T 2zf5_O 78 VTNQRETTLVWDK-DGKPLYNAIVWQCRRTAEMVEEIKRE-Y---GTMIKEKTGLVPDAYFSASKLKWLLDNVPGLREKA 152 (497)
T ss_dssp EEECSSCEEEECT-TCCBSSCEECTTCCTTHHHHHHHHHH-H---HHHHHHHHSSCCCTTSHHHHHHHHHHHSTTHHHHH
T ss_pred EecCCCcEEEECC-CCCCcccceeecccCcHHHHHHHHhh-h---HHHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHH
Confidence 9999999999999 79999999999999999999999876 3 25688899999999999999999999999999999
Q ss_pred hcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC---C-
Q psy9709 312 KENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN---N- 387 (500)
Q Consensus 312 ~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~---~- 387 (500)
+++...|++++|||.|+|| |+.++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+... .
T Consensus 153 ~~~~~~~~~~~d~l~~~LT--G~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~g~g 230 (497)
T 2zf5_O 153 EKGEVMFGTVDTFLIYRLT--GEHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKELLGAE 230 (497)
T ss_dssp HTTCCEEEEHHHHHHHHHH--SCCEEEHHHHTTSSSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCHHHHSSC
T ss_pred hcCCCEEEcHHHHHHHHHh--CCeeeeHHHhhhhcCccCCCCCcCHHHHHHcCcCHHHCCCcCCCCCeeeecCHHHcCCC
Confidence 7333448899999999999 789999999999999999999999999999999999999999999999975310 1
Q ss_pred -----------------------------cceEEEEEeecC--------------CCCc--eeeechhhhchhHHHHHHH
Q psy9709 388 -----------------------------GLVTTVAYQFGP--------------DATP--IYALEGSIAVAGAAVKWLR 422 (500)
Q Consensus 388 -----------------------------G~~~~~~~~~~~--------------~~p~--~~~~~g~~~~~G~~~~w~~ 422 (500)
|....+....+. ..|+ .|.++|+++++|.+++|++
T Consensus 231 ~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~w~~ 310 (497)
T 2zf5_O 231 IPVSGDAGDQQAALFGQAAFEAGMVKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRVSYALEGSIFVTGAAVQWLR 310 (497)
T ss_dssp CEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCCCTTSEEEEEEEETTEEEEEEEEEESCSHHHHHHHH
T ss_pred CeEEEEccHHHHHHHhCCCCCCCcEEEEcchhheeeEECCCCccCCCCcEEEEEEEcCCCCEEEEechhhhHHHHHHHHH
Confidence 111111111110 0122 6889999999999999999
Q ss_pred HHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Q psy9709 423 DNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILELY 500 (500)
Q Consensus 423 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~~~ 500 (500)
+.++...+|++++++++++|++++++|+|||.|+|+|+||+++||+|+|++..|+++|++||++||+||.+|++++.|
T Consensus 311 ~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~l~~l 388 (497)
T 2zf5_O 311 DGIKIIKHASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEM 388 (497)
T ss_dssp HTSCCCSCGGGHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCcHHHHHHHHhhCCCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988765678889999888888999999999999999999999999999999999999999999999999999999864
No 10
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=1e-59 Score=497.95 Aligned_cols=338 Identities=41% Similarity=0.738 Sum_probs=296.0
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 232 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~v 232 (500)
++++|||+|||++|++++|.+ |+++...+.+++..++++||.+||+++||+++++++++++++ .+++..+|.+|||
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~-g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igi 77 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE-GRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRR---AGAEAGEVLALGI 77 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT-SCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGCCEEEE
T ss_pred cEEEEEeeCCcceEEEEECCC-CCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEE
Confidence 478999999999999999985 999999999999888999999999999999999999999875 4556678999999
Q ss_pred cCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHHhh
Q psy9709 233 TNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRAIK 312 (500)
Q Consensus 233 s~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~ 312 (500)
+++++++++||+++|++++|+|.|+|.|+.++++++.+. +. .+.+++.||.++++.++++||+|+++|+||+|++++
T Consensus 78 s~~~~~~~~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~-~~--~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~ 154 (495)
T 2dpn_A 78 TNQRETTLLWDRKTGKPLHNAIVWQDRRTTPLCEALRAK-GL--EPLFRERTGLLFDPYFSGTKLVWLLENVPGLKARAE 154 (495)
T ss_dssp EECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHHT-TC--HHHHHHHTSCCSCTTSHHHHHHHHHHHSSSHHHHHH
T ss_pred eCCCccEEEEECCCCcCCccceeecccChHHHHHHHHhc-cc--hhHHHHHhCCCCCchhHHHHHHHHHHcCHHHHHHHh
Confidence 999999999998449999999999999999999999876 21 357888999999999999999999999999999997
Q ss_pred cccccccchhHHHHHhhcCCC--eeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC---C
Q psy9709 313 ENRCLFGTVDTWLVWNLTGRT--CHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN---N 387 (500)
Q Consensus 313 ~~~~~~~~~~dyi~~~LTg~g--~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~---~ 387 (500)
++.+.|++++|||.|+|| | ++++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+... .
T Consensus 155 ~~~~~~~~~~d~l~~~LT--G~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~G~ 232 (495)
T 2dpn_A 155 GGGVAFGTVDTWLIWNLT--GGKVHATDPTNASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPELLGA 232 (495)
T ss_dssp HTCEEEECHHHHHHHHHT--TTSCCEECHHHHTTSSSEETTTTEECHHHHHHTTCCSTTCCEECCTTSCCCBCCHHHHSS
T ss_pred cCCcEEECHHHHHHHHhc--CCCeEEEehHHhHhhcCccCccCCcCHHHHHHcCCCHHHCCCccCCCCeeEeccHHHcCC
Confidence 333449999999999999 6 79999999999999999999999999999999999999999999999975310 0
Q ss_pred ------------------------------cceEEEEEeecC---------------CCCc--eeeechhhhchhHHHHH
Q psy9709 388 ------------------------------GLVTTVAYQFGP---------------DATP--IYALEGSIAVAGAAVKW 420 (500)
Q Consensus 388 ------------------------------G~~~~~~~~~~~---------------~~p~--~~~~~g~~~~~G~~~~w 420 (500)
|....+....+. ..|+ .|.++|+++++|.+++|
T Consensus 233 g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~w 312 (495)
T 2dpn_A 233 PVPIRGVLGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGRATYALEGSLFVAGAAVGW 312 (495)
T ss_dssp CCBEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHHHH
T ss_pred CCeEEEECcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcCCccccCCCCceEEEEEEcCCCCEEEEechHHhHHHHHHH
Confidence 111111111110 0123 68889999999999999
Q ss_pred HHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Q psy9709 421 LRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILELY 500 (500)
Q Consensus 421 ~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~~~ 500 (500)
+++ ++...+|+++++++++++++++++|+|||.|+|+|+||+++||+|+|++..|+++|++||++||+||.+|.+++.|
T Consensus 313 ~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l 391 (495)
T 2dpn_A 313 LKE-VGLIRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVLAM 391 (495)
T ss_dssp HHH-TTSSSSTTTHHHHHHTCSCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-cCCccCHHHHHHHHhhCCCCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 8765678889999988888899999999999999999999999999999999999999999999999999999864
No 11
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=1e-59 Score=505.61 Aligned_cols=337 Identities=18% Similarity=0.249 Sum_probs=289.1
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecc-----cccCC------CCeEEEChHHHHHHHHHHHHHHHHHHHhC
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDIS-----TISPQ------EGWAEQDPMEILQAVQTTMDRAIEKLSAH 220 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~-----~~~~~------~g~~~~d~~~~~~~i~~~l~~~~~~~~~~ 220 (500)
++|+||||+|||++|+++||.++|+++...+.+++ ...|+ +||.||||++||+++++++++++++ .
T Consensus 4 ~~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~---~ 80 (572)
T 3jvp_A 4 TKYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKE---S 80 (572)
T ss_dssp -CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC----
T ss_pred CCEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHH---c
Confidence 56999999999999999999734999999999888 55676 9999999999999999999999875 3
Q ss_pred CCCCCCeeEEEEcCCCceeEEEeCCCCccccc-----------ceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCc
Q psy9709 221 GLSRDDIVTLGITNQRETTVVWDLNTGEPLYN-----------AIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVS 289 (500)
Q Consensus 221 ~~~~~~I~~I~vs~~~~~~v~~d~~~G~~l~~-----------~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~ 289 (500)
++++.+|.+|||++|++++++||+ +|+|++| +|+|+|.|+.++++++.+.++. ..+.+++.+|.+++
T Consensus 81 ~~~~~~I~~Igis~q~~~~v~~D~-~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~-~~~~~~~~tG~~~~ 158 (572)
T 3jvp_A 81 GVDADDVIGIGVDFTACTMLPVDE-EGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEK-RGEAFLPRYGGKIS 158 (572)
T ss_dssp --CCSCEEEEEEEECSSCEEEECT-TSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHH-HTCTTGGGGTTCCC
T ss_pred CCChhHEEEEEEecCCCcEEEECC-CCCCCccCccccccccccceecCccchHHHHHHHHHhccc-cHHHHHHHhCCCCC
Confidence 566789999999999999999999 6999998 7999999999999999875420 01468889999999
Q ss_pred hhchHHHHHHHHhhChHHHHHhhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCC-cHHHHhhcC----
Q psy9709 290 PYFSALKLSWLIQNVSSVRRAIKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQW-DPLLCKYFA---- 364 (500)
Q Consensus 290 ~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W-~~~ll~~~g---- 364 (500)
+.++++||+||++|+||+|++++ +|++++|||.|+|| |+.++|+|+|+++++|| ++++| ++++|+.+|
T Consensus 159 ~~~~~~kl~wl~~~~Pe~~~~~~----~~l~~~dyl~~~LT--G~~~~d~s~As~t~l~d-~~~~W~~~ell~~~g~~l~ 231 (572)
T 3jvp_A 159 SEWMIAKVWQILDEAEDVYNRTD----QFLEATDWIVSQMT--GKIVKNSCTAGYKAIWH-KREGYPSNEFFKALDPRLE 231 (572)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHCS----EEEEHHHHHHHHHH--SSCCEEHHHHHHHSCCB-TTTBSCCHHHHHTTCGGGT
T ss_pred chhHHHHHHHHHHhCHHHHHHhh----eEecHHHHHHHHhc--CCceeehhhccccceeC-CCCCcCCHHHHHHhCcccc
Confidence 99999999999999999999987 89999999999999 78999999999999999 99999 999999998
Q ss_pred -CCCCCC-CCcccCCcccceeecC--------C------------------c------------ceEEEEEee-------
Q psy9709 365 -VPPTIL-PEIRSSSEIYGKVHSN--------N------------------G------------LVTTVAYQF------- 397 (500)
Q Consensus 365 -l~~~~l-P~i~~~~~~~G~~~~~--------~------------------G------------~~~~~~~~~------- 397 (500)
+++++| |+|+++++++|.+... . | ....+....
T Consensus 232 ~i~~~~L~p~i~~~~~~~G~l~~~~A~~~GL~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~~~~~~ 311 (572)
T 3jvp_A 232 HLTTTKLRGDIVPLGERAGGLLPEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTSICHMLLGEKEQEVE 311 (572)
T ss_dssp TSTTTTTCSCEECTTSEEEECCHHHHHHHTSCTTCEEECCEETTTTHHHHTTCCSSEEEEEEESSSEEEEEEESSCCCCT
T ss_pred cCCHhHCCCccCCcCccccccCHHHHHHhCCCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEecchhheeeecCCCccCC
Confidence 455666 8999999999984320 0 1 111111100
Q ss_pred -------cCCCCceeeechhhhchhHHHHHHHHHcCC-----------CCCHHHHHHHHHhcC-CCCCeEEeccCCCCCC
Q psy9709 398 -------GPDATPIYALEGSIAVAGAAVKWLRDNLNL-----------MDNVRETESLAEKVM-TTGDVYFVPAFGGLYA 458 (500)
Q Consensus 398 -------~~~~p~~~~~~g~~~~~G~~~~w~~~~~~~-----------~~~~~~l~~~~~~~~-~~~~l~~~P~~~G~r~ 458 (500)
+...|+.|.++|+++++|.+++||++.+.. .+.|+++++++++++ +++|++|+|||.|||+
T Consensus 312 ~~~~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~ 391 (572)
T 3jvp_A 312 GMCGVVEDGIIPGYLGYEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGESGLLALDWWNGNRS 391 (572)
T ss_dssp TCSEEEETSSSTTSEEEEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSSCTTSSCCEEECCTTCCCT
T ss_pred CceeeccCccCCCcEEEeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhCCCCCCCeEeCCccCCCCC
Confidence 112368899999999999999999999853 123788999988876 9999999999999999
Q ss_pred CCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Q psy9709 459 PYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILELY 500 (500)
Q Consensus 459 P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~~~ 500 (500)
|+|||++||+|+|++..|+++||+||++|||||.+|+++|.|
T Consensus 392 P~~d~~arg~~~Gl~~~~t~~~l~RAvlEgia~~~r~~~~~l 433 (572)
T 3jvp_A 392 ILVDTELSGMLLGYTLQTKPEEIYRALLEATAFGTRAIVDAF 433 (572)
T ss_dssp TTCCSSCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999864
No 12
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=2.2e-59 Score=496.42 Aligned_cols=340 Identities=41% Similarity=0.700 Sum_probs=297.4
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 232 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~v 232 (500)
++++|||+|||++|+++||.+ |+++...+.+++..++++||.+||+++||+++++++++++++.. .+++..+|.+|||
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~-g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~~~-~~~~~~~i~~Igi 81 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEE-LNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKVLK-DKYTSVIIKCIGI 81 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETT-CCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHHHH-HHSSSCEEEEEEE
T ss_pred cEEEEEEeCCcceEEEEECCC-CCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHHhh-cCCCccceEEEEE
Confidence 589999999999999999985 99999999999988899999999999999999999999887520 0244568999999
Q ss_pred cCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHHhh
Q psy9709 233 TNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRAIK 312 (500)
Q Consensus 233 s~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~ 312 (500)
+++++++++||+++|++++|+|.|+|.|+.++++++.+... .+.+++.||.++++.++++||+|+++|+||+|++++
T Consensus 82 s~~~~~~~~~D~~~G~~l~~~i~w~D~r~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~ 158 (503)
T 2w40_A 82 TNQRETVIIWDRITGKPLYNAIVWLDTRVEELVTEFSAKYN---NNDIQKKTGTYFNTYFSAFKILWLIQNNPEIKQKID 158 (503)
T ss_dssp EECSSCEEEEETTTCCBSSCEECTTCCTTHHHHHHHHHHSC---HHHHHHHHSSCCCSSSHHHHHHHHHHHCHHHHHHHH
T ss_pred cCCcceEEEEECCCCcCCccceeecccCcHHHHHHHHhccc---hHHHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHh
Confidence 99999999999944999999999999999999999988632 357888999999999999999999999999999998
Q ss_pred cccccccchhHHHHHhhcCCC-eeeeecccccccccccCCCCCCcHHHHhhcCCC-CCCCCCcccCCcccceeecC---C
Q psy9709 313 ENRCLFGTVDTWLVWNLTGRT-CHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVP-PTILPEIRSSSEIYGKVHSN---N 387 (500)
Q Consensus 313 ~~~~~~~~~~dyi~~~LTg~g-~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~-~~~lP~i~~~~~~~G~~~~~---~ 387 (500)
+++..|++++|||.|+|| | ++++|+|+|++|++||+++++|++++|+.+||+ .++||+|+++++++|.+... .
T Consensus 159 ~~~~~~~~~~d~l~~~LT--G~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~~lP~i~~~~~~~G~~~~~~~g~ 236 (503)
T 2w40_A 159 DGTAVIGNINTWLIFNLT--KGNCYTDVTNASRTLLMDINTLQWDEKMCKIFNITNMSVLPEIKSNCSNFGLVKSEHVPD 236 (503)
T ss_dssp TTCEEEEEHHHHHHHHHH--TSCCEEEHHHHTTTTCBCTTTCSBCHHHHHHTTCCCGGGSCEEECSEEEEEECCCTTSGG
T ss_pred cCCeEEECHHHHHHHHHc--CCCccccHHHhhhhcCccCCCCccCHHHHHHcCCChHHHCCCccCCcCceeeccHHHcCC
Confidence 333449999999999999 6 599999999999999999999999999999999 99999999999999976421 0
Q ss_pred --cce------------------------------EEEEEeec---------------CCCCc----eeeechhhhchhH
Q psy9709 388 --GLV------------------------------TTVAYQFG---------------PDATP----IYALEGSIAVAGA 416 (500)
Q Consensus 388 --G~~------------------------------~~~~~~~~---------------~~~p~----~~~~~g~~~~~G~ 416 (500)
|+. ..+....+ ...|+ .|.++|+++++|.
T Consensus 237 ~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~g~ 316 (503)
T 2w40_A 237 YLNIPITGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGTAGS 316 (503)
T ss_dssp GTTCEEEEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCSTTSCCEEEEEEEESCSHH
T ss_pred CCCceEEEECchHHHHHHhCCCCCCCcEEEEechhheeeeecCCccccCCCCceeEEEeecCCCCCceEEEechhhhhHh
Confidence 210 11111111 01244 7999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9709 417 AVKWLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDI 496 (500)
Q Consensus 417 ~~~w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~ 496 (500)
+++|+++ ++...+|++++++++++++++|++|+|||.|+|+|+|||++||+|+|++..|+++|++||++||+||.+|.+
T Consensus 317 ~~~w~~~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~ 395 (503)
T 2w40_A 317 GVSWLLK-NKLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLNEI 395 (503)
T ss_dssp HHHHHHH-TTSSSCGGGHHHHHHHCCSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-hCCcCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999 876567889999998888899999999999999999999999999999999999999999999999999999
Q ss_pred HHhC
Q psy9709 497 LELY 500 (500)
Q Consensus 497 ~~~~ 500 (500)
+|.|
T Consensus 396 ~~~l 399 (503)
T 2w40_A 396 VDSL 399 (503)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 13
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=1.3e-59 Score=498.13 Aligned_cols=339 Identities=44% Similarity=0.799 Sum_probs=298.6
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 232 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~v 232 (500)
++++|||+|||++|++++|.+ |+++...+.+++..+|++||.+||+++||+++++++++++++ .+++..+|.+|||
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~-G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igi 77 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHS-GEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTR---GNLTHEDIAAVGI 77 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEE
T ss_pred CEEEEEecCCcceEEEEECCC-CCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHH---cCCCcccEEEEEE
Confidence 478999999999999999985 999999999999888999999999999999999999999875 4555678999999
Q ss_pred cCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHHhh
Q psy9709 233 TNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRAIK 312 (500)
Q Consensus 233 s~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~ 312 (500)
+++++++++||+++|++++|+|.|+|.|+.++++++.+..+ .+.+++.||.++++.++++||+|+++|+||+|++++
T Consensus 78 s~~g~~~v~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~~~~~~~ 154 (504)
T 2d4w_A 78 TNQRETAVVWDKTTGKPVYNAIVWQDTRTQKIVDELGGDEG---AEKYKSIVGLPLATYFSGPKIKWILDNVEGAREKAE 154 (504)
T ss_dssp EECSSCBEEEETTTCCBSSCEECTTCCTTHHHHHHHHCSSC---GGGGHHHHSCCSCTTSHHHHHHHHHHHSTTHHHHHH
T ss_pred eCCCCeEEEEECCCCCCccccceecccChHHHHHHHHhhcc---hHHHHHHhCCCCCchhHHHHHHHHHHcChhHHHHHh
Confidence 99999999999844999999999999999999999987553 367889999999999999999999999999999997
Q ss_pred cccccccchhHHHHHhhcCCC--e---eeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeec-C
Q psy9709 313 ENRCLFGTVDTWLVWNLTGRT--C---HVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHS-N 386 (500)
Q Consensus 313 ~~~~~~~~~~dyi~~~LTg~g--~---~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~-~ 386 (500)
++.+.|++++|||.|+|| | + +++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+.. .
T Consensus 155 ~~~~~~~~~~d~l~~~LT--G~~~~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~ 232 (504)
T 2d4w_A 155 KGDLLFGNTDTWVLWNMT--GGTEGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPRG 232 (504)
T ss_dssp HTCEEEECHHHHHHHHHT--TTTTTCCCEEEHHHHTTTTCEETTTTEECHHHHHHTTCCGGGSCEEECSEEEEEECCTTS
T ss_pred cCCeEEecHHHHHHHHhc--CCCcCCceeeehhhhhhhcCccCCCCccCHHHHHHhCCCHHHCCCccCCccceeccchHH
Confidence 334449999999999999 5 6 999999999999999999999999999999999999999999999998653 1
Q ss_pred -Cc-------------------------------ceEEEEEeec---------------CCCCc---eeeechhhhchhH
Q psy9709 387 -NG-------------------------------LVTTVAYQFG---------------PDATP---IYALEGSIAVAGA 416 (500)
Q Consensus 387 -~G-------------------------------~~~~~~~~~~---------------~~~p~---~~~~~g~~~~~G~ 416 (500)
.| ....+....+ ...|+ .|..+|+++++|.
T Consensus 233 ~~G~~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~ 312 (504)
T 2d4w_A 233 LVPGVPIAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGDAPAVYALEGSIAVTGS 312 (504)
T ss_dssp SSTTCEEEEEEEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCTTSCCEEEEEEEESCSHH
T ss_pred hCCCCeEEEECCcHHHHHhhCCCCCCCcEEEEcchhheeeeecCCccccCCCCcEEEEEEEcCCCCceEEEcchhhhHHH
Confidence 11 0011111111 01245 7899999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHH
Q psy9709 417 AVKWLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDI 496 (500)
Q Consensus 417 ~~~w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~ 496 (500)
+++|+++.++...+|++++++++++++++|++|+|||.|+|+|+|||++||+|+|++..|+++|++||++||+||.+|.+
T Consensus 313 ~~~W~~~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~ 392 (504)
T 2d4w_A 313 LVQWLRDNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSREV 392 (504)
T ss_dssp HHHHHHHTTCTTTTCSCTHHHHTTSSSCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998876556778888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHhC
Q psy9709 497 LELY 500 (500)
Q Consensus 497 ~~~~ 500 (500)
++.|
T Consensus 393 ~~~l 396 (504)
T 2d4w_A 393 VDAM 396 (504)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 14
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=1.1e-58 Score=489.02 Aligned_cols=328 Identities=23% Similarity=0.341 Sum_probs=282.6
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
+++|||+|||++|++++|.+ |+++...+.+++...+++||.+||+++||+++++++++++++. ...+|.+|||+
T Consensus 1 ~~lgiDiGtt~~k~~l~d~~-g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~~-----~~~~i~~Igis 74 (484)
T 2itm_A 1 MYIGIDLGTSGVKVILLNEQ-GEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQH-----SLQDVKALGIA 74 (484)
T ss_dssp CEEEEEECSSEEEEEEECTT-SCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHHS-----CCTTCCEEEEE
T ss_pred CEEEEEecCcccEEEEECCC-CCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHhC-----CccceEEEEEc
Confidence 36899999999999999985 9999999999998899999999999999999999999988651 24679999999
Q ss_pred CCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChHHHHHhhc
Q psy9709 234 NQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSSVRRAIKE 313 (500)
Q Consensus 234 ~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~ 313 (500)
++++++++||+ +|+|++|+|.|+|.|+.++++++.+..+ .+++.||.++++.++++||+|+++|+||+|++++
T Consensus 75 ~~~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~-----~~~~~tG~~~~~~~~~~kl~wl~~~~P~~~~~~~- 147 (484)
T 2itm_A 75 GQMHGATLLDA-QQRVLRPAILWNDGRCAQECTLLEARVP-----QSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQID- 147 (484)
T ss_dssp ECSSCBEEECT-TCCBCSCEECTTCCTTHHHHHHHHHHCT-----THHHHHSSCCCTTSHHHHHHHHHHHCHHHHTTCC-
T ss_pred CCcCcEEEECC-CcCCCcccceecccCcHHHHHHHHHhHH-----HHHHHhCCCCCcccHHHHHHHHHHhChHHHHHHh-
Confidence 99999999999 6999999999999999999999988753 2566799999999999999999999999999887
Q ss_pred ccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC----C--
Q psy9709 314 NRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN----N-- 387 (500)
Q Consensus 314 ~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~----~-- 387 (500)
+++.++|||.|+|| |+.++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+... .
T Consensus 148 ---~~l~~~d~l~~~LT--G~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lp~i~~~~~~~G~~~~~~a~~~Gl 222 (484)
T 2itm_A 148 ---KVLLPKDYLRLRMT--GEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWGM 222 (484)
T ss_dssp ---EEECHHHHHHHHHH--SCCEEEHHHHHTTTCEETTTTEECHHHHHTTTCCGGGSCEEECTTSEEEECCHHHHHHHTS
T ss_pred ---heeCcHHHHHHHHh--CCceeeHHHhhccccccCCCCCcCHHHHHHcCCCHHHCCCccCCcceeeccCHHHHHHhCC
Confidence 79999999999999 789999999999999999999999999999999999999999999999984321 0
Q ss_pred -c------------------------------ceEEEEEee--------------cCCCCceeeechhhhchhHHHHHHH
Q psy9709 388 -G------------------------------LVTTVAYQF--------------GPDATPIYALEGSIAVAGAAVKWLR 422 (500)
Q Consensus 388 -G------------------------------~~~~~~~~~--------------~~~~p~~~~~~g~~~~~G~~~~w~~ 422 (500)
| ....+.... .+..|+.|.++++++++|.+++|++
T Consensus 223 ~g~pV~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~W~~ 302 (484)
T 2itm_A 223 ATVPVVAGGGDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAA 302 (484)
T ss_dssp CCCEEECCEEHHHHHHHHHTCCSTTCEEEEESSSEEEEEECSSCCCCCSSSCEEEECSSTTCEEEEEEECCHHHHHHHHH
T ss_pred CCCeEEEEchHHHHHHHhCCCCCCCcEEEEccchheeEEecCCCccCcccceEEeecccCCeeeeeehhhhHHHHHHHHH
Confidence 1 101111100 0124678999999999999999999
Q ss_pred HHcCCCCCHHHHHHHHHhcC-CCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Q psy9709 423 DNLNLMDNVRETESLAEKVM-TTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAALEAICFQTRDILELY 500 (500)
Q Consensus 423 ~~~~~~~~~~~l~~~~~~~~-~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~Egia~~~~~~~~~~ 500 (500)
+.++. .+|+.+.+++++.+ ++++++|+|||.|+|+|+||+++||+|+|++.+|+++|++||++||+||.+|++++.|
T Consensus 303 ~~~~~-~~~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l 380 (484)
T 2itm_A 303 KLTGL-SNVPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVV 380 (484)
T ss_dssp HHTTC-CSHHHHHHHGGGCCTTSCCCEEEEEEC--------CCEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCc-ccHHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98864 46888888877765 9999999999999999999999999999999999999999999999999999999864
No 15
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=9.9e-58 Score=483.30 Aligned_cols=325 Identities=21% Similarity=0.297 Sum_probs=280.8
Q ss_pred cCCEEEEEeccCCCceEEEEe-CCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIIS-ALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 229 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d-~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~ 229 (500)
.++|+||||+|||++|+++|| .+ |+++...+.++ ++|.+||+++||++++++++++ +. ..+|.+
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~~-G~i~~~~~~~~------~g~~e~d~~~~~~~i~~~l~~~-------~~-~~~I~~ 67 (515)
T 3i8b_A 3 LRTLVAGVDTSTQSCKVRVTDAET-GELVRFGQAKH------PNGTSVDPSYWWSAFQEAAEQA-------GG-LDDVSA 67 (515)
T ss_dssp CSCEEEEEEECSSEEEEEEEETTT-CCEEEEEEEEC------CSSSEECTHHHHHHHHHHHHHT-------TC-STTEEE
T ss_pred CCcEEEEEEeccccEEEEEEECCC-CeEEEEEEEeC------CCCceECHHHHHHHHHHHHHhc-------CC-ccCceE
Confidence 467999999999999999999 64 99999887776 4789999999999998887653 23 478999
Q ss_pred EEEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCC-C------------ccchhhcccCCCCchhchHHH
Q psy9709 230 LGITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPD-Q------------DKDYLKPICGLPVSPYFSALK 296 (500)
Q Consensus 230 I~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~-~------------~~~~~~~~tG~~~~~~~~~~k 296 (500)
||+++|++++++||+ +|+|++|+|+|+|.|+.++++++.+.++. . ..+++++.||.++++.++++|
T Consensus 68 Igis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~k 146 (515)
T 3i8b_A 68 LAVGGQQHGMVILDN-QGNVIRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTK 146 (515)
T ss_dssp EEEEECSSCBEEECT-TSCBCSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHHHH
T ss_pred EEEeCCcceEEEECC-CCCCcCCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchhHHHH
Confidence 999999999999999 79999999999999999999999886531 0 015788999999999999999
Q ss_pred HHHHHhhChHHHHHhhcccccccchhHHHHHhhcCCCe-------------eeeecccccccccccCCCCCCcHHHHhhc
Q psy9709 297 LSWLIQNVSSVRRAIKENRCLFGTVDTWLVWNLTGRTC-------------HVTDVTNASRTMLMNIDSLQWDPLLCKYF 363 (500)
Q Consensus 297 l~Wl~~~~pe~~~~~~~~~~~~~~~~dyi~~~LTg~g~-------------~~~d~s~as~t~l~d~~~~~W~~~ll~~~ 363 (500)
|+|+++|+||+|++++ +|++++|||.|+|| |+ +++|+|+|++|++||+++++|++++|+.+
T Consensus 147 l~Wl~~~~Pe~~~~~~----~~l~~~dyl~~~LT--G~~~~~~~~~~~~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~ 220 (515)
T 3i8b_A 147 VAWVAENEPENVKKIA----AICLPHDWLSWRIA--GYGPVAEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIAMV 220 (515)
T ss_dssp HHHHHHHCHHHHTTCS----EEECHHHHHHHHHT--TCCCCCTTSCCCGGGCEEEHHHHTTSSSEETTTTEECHHHHHHH
T ss_pred HHHHHHcChHHHHHHh----eecCHHHHHHHHhc--CCCcccccccccccceeecHHHhhcccCeeCCcCccCHHHHHhh
Confidence 9999999999999887 89999999999999 55 68999999999999999999999999998
Q ss_pred -CCC-----------CCCCCCcccCCcccceeecC----Ccce-----------------------EEEEEeecC-----
Q psy9709 364 -AVP-----------PTILPEIRSSSEIYGKVHSN----NGLV-----------------------TTVAYQFGP----- 399 (500)
Q Consensus 364 -gl~-----------~~~lP~i~~~~~~~G~~~~~----~G~~-----------------------~~~~~~~~~----- 399 (500)
||+ .++||+|+++++++|.+... .|+. ..+...+|+
T Consensus 221 ~gi~~~~~~~~~~~~~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~g~~~g~~~~s~GTs~~~~ 300 (515)
T 3i8b_A 221 LEAAEGAKAAQSHAEAIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASLGLGMAVGDVSISLGTSGVAA 300 (515)
T ss_dssp HHHHHCHHHHHHHHHHSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHHHHTTCCTTEEEEEESSSEEEE
T ss_pred cCCCcccccccccchHHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHHhhCCCCCCcEEEEechhhhhh
Confidence 998 78999999999999985431 1110 000001110
Q ss_pred ------------------CCCceeeechhhhchhHHHHHHHHHcCCCCCHHHHHHHHHhcC-CCCCeEEeccCCCCCCCC
Q psy9709 400 ------------------DATPIYALEGSIAVAGAAVKWLRDNLNLMDNVRETESLAEKVM-TTGDVYFVPAFGGLYAPY 460 (500)
Q Consensus 400 ------------------~~p~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~P~~~G~r~P~ 460 (500)
..+|.|+.++++.++|.+++|+++.++. +|+++++++++++ ++++++|+|||.|+|+|+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~gg~~l~w~~~~~~~--~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~P~ 378 (515)
T 3i8b_A 301 AISENPTYDLTGAVSGFADCTGHYLPLACTINGSRILDAGRAALGV--DYDELAKLAFASKPGANGITLVPYFDGERTPN 378 (515)
T ss_dssp ECBSSCCCCTTSCSEEEECSSSSEEEEEEESCSTHHHHHHHHHHTC--CHHHHHHHHHHSCTTGGGCEEECCTTCBTTTT
T ss_pred cccCccccCCCCcEEeeecCCCCEEEeeecccHHHHHHHHHHHhCC--CHHHHHHHHHhCCCCCCCeEEecCCCCCcCCC
Confidence 1256788888899999999999998864 6999999999986 889999999999999997
Q ss_pred CCCCCcEEEEcCCCCC-CHHHHHHHHHHHHHHHHHHHHHhC
Q psy9709 461 WRKDARGVICGMTQFT-TKGHIIRAALEAICFQTRDILELY 500 (500)
Q Consensus 461 ~~~~~~g~f~Gl~~~~-~~~~l~rAv~Egia~~~~~~~~~~ 500 (500)
+ |++||+|+|++..| +++||+||++||+||.+|++++.|
T Consensus 379 ~-~~arg~~~Gl~~~~~~~~~l~RAvlEgia~~~r~~l~~l 418 (515)
T 3i8b_A 379 R-PNATATFSGMTLANTTRENLARAFVEGLLCSQRDCLELI 418 (515)
T ss_dssp B-TTCCCEEESCCTTTCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C-cCcceEEecCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6 99999999999999 999999999999999999999864
No 16
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=4.6e-57 Score=483.53 Aligned_cols=331 Identities=22% Similarity=0.298 Sum_probs=282.0
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
.++|+||||+|||++|+++||.+ |++++..+.+++..+|++||.|||+++||+++++++++++++. ++++.+|.+|
T Consensus 3 ~~~~~lgIDiGtts~ka~l~d~~-G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~~---~~~~~~I~~I 78 (554)
T 3l0q_A 3 LASYFIGVDVGTGSARAGVFDLQ-GRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQA---DINPIQVKGL 78 (554)
T ss_dssp -CCEEEEEEECSSEEEEEEEETT-SCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHHH---TCCGGGEEEE
T ss_pred CCcEEEEEEECcccEEEEEECCC-CCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHHc---CCCHhHEEEE
Confidence 35699999999999999999975 9999999999998889999999999999999999999998763 5667789999
Q ss_pred EEcCCCceeEEEeCCCCccc---------ccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPL---------YNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLI 301 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l---------~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~ 301 (500)
|+++| +++|+||+ +|+|+ +|+|+|+|.|+.++++++.+.. +++++.||.+++++++++||+||+
T Consensus 79 gis~~-~~~v~~D~-~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~-----~~~~~~tG~~~~~~~~~~Kl~Wl~ 151 (554)
T 3l0q_A 79 GFDAT-CSLVVLDK-EGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATK-----HPVLEFVGGVISPEMQTPKLLWLK 151 (554)
T ss_dssp EEEEC-SCEEEEET-TSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHT-----CGGGGGBTTCCCTTSHHHHHHHHH
T ss_pred EEcCC-CceEEECC-CCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhH-----HHHHHHhCCCCChhhHHHHHHHHH
Confidence 99998 79999999 69999 7999999999999999998862 458899999999999999999999
Q ss_pred hhChHHHHHhhcccccccchhHHHHHhhcCCCeeeeecccccccc--cccCCCCCCcHHHHhhcCCCCC------CCC-C
Q psy9709 302 QNVSSVRRAIKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTM--LMNIDSLQWDPLLCKYFAVPPT------ILP-E 372 (500)
Q Consensus 302 ~~~pe~~~~~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~--l~d~~~~~W~~~ll~~~gl~~~------~lP-~ 372 (500)
+|+||+|++++ +|++++|||.|+|| |+.. +++++.++ .||+++++|++++|+.+||+.. +|| +
T Consensus 152 ~~~Pe~~~~~~----~~~~~~dyl~~~LT--G~~~--~s~as~t~~~~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~~ 223 (554)
T 3l0q_A 152 QHMPNTWSNVG----HLFDLPDFLTWRAT--KDET--RSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGAT 223 (554)
T ss_dssp HHCHHHHHHEE----EEEEHHHHHHHHHH--SCCC--EEHHHHHHHSCCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCSC
T ss_pred HhChHHHHHhc----eEEcHHHHHHHHHh--CCcc--ccccchhhccccccccCCCCHHHHHHcCCccccchhHHhCCCc
Confidence 99999999987 89999999999999 5564 56666665 4788999999999999999962 899 6
Q ss_pred cccCCcccc-eeec---------------------------CCcce---E-------EEEEeec----------------
Q psy9709 373 IRSSSEIYG-KVHS---------------------------NNGLV---T-------TVAYQFG---------------- 398 (500)
Q Consensus 373 i~~~~~~~G-~~~~---------------------------~~G~~---~-------~~~~~~~---------------- 398 (500)
|+++++++| .+.. ..|.. . ......|
T Consensus 224 i~~~~~~~G~~lt~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~~~~~~~~GTs~~~~~~~~~~~~~~ 303 (554)
T 3l0q_A 224 VKPMGAPLGHGLSQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSRSAHFIS 303 (554)
T ss_dssp EECTTCBCTTSSCHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTTTEEEEECSSSEEEEEEESSCCCCT
T ss_pred ccCCcCeeCcccCHHHHHHhCCCCCCeEEEeChHHHhHHhhccccccCCCccccccceEEEEecchheeeeecCCccccC
Confidence 999999999 5221 00111 0 1111111
Q ss_pred --------CCCCceeeechhhhchhHHHHHHHHHcCC------------CCCHHHHHHHHHhcC-C-------CCCeEEe
Q psy9709 399 --------PDATPIYALEGSIAVAGAAVKWLRDNLNL------------MDNVRETESLAEKVM-T-------TGDVYFV 450 (500)
Q Consensus 399 --------~~~p~~~~~~g~~~~~G~~~~w~~~~~~~------------~~~~~~l~~~~~~~~-~-------~~~l~~~ 450 (500)
+..|+.|.++|+++++|.+++|+++.++. .+.|+.+++++++.+ + ++|++|+
T Consensus 304 ~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gl~fl 383 (554)
T 3l0q_A 304 GIWGPYYSAILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHML 383 (554)
T ss_dssp TSEEEEETSSSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSGGGGGGGGTTCCEE
T ss_pred CcceeecccccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCCCccccccCceEEc
Confidence 12367899999999999999999998752 234777777766653 3 7899999
Q ss_pred ccCCCCCCCCCCCCCcEEEEcCCCCCCHHHH---HHHHHHHHHHHHHHHHHhC
Q psy9709 451 PAFGGLYAPYWRKDARGVICGMTQFTTKGHI---IRAALEAICFQTRDILELY 500 (500)
Q Consensus 451 P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l---~rAv~Egia~~~~~~~~~~ 500 (500)
|||.|+|+|+|||++||+|+||+.+|+++|| +||++||+||++|+++|.|
T Consensus 384 P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l 436 (554)
T 3l0q_A 384 PYFHGNRSPRANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETM 436 (554)
T ss_dssp CCTTCBCSSSCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999 8999999999999999864
No 17
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=2.3e-55 Score=468.56 Aligned_cols=329 Identities=14% Similarity=0.107 Sum_probs=275.3
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCC----CCeE-------EEChHH-HHHHHHHHHHHHHHHHHh
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQ----EGWA-------EQDPME-ILQAVQTTMDRAIEKLSA 219 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~----~g~~-------~~d~~~-~~~~i~~~l~~~~~~~~~ 219 (500)
++|+||||+|||++|+++||.+ |++++..+.+++..+|+ +||. ||||++ ||+++..+++.+ .+
T Consensus 9 ~~~~lgID~GTts~Ka~l~d~~-G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~~l-~~--- 83 (538)
T 4bc3_A 9 RRCCLGWDFSTQQVKVVAVDAE-LNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILEKM-KA--- 83 (538)
T ss_dssp CCEEEEEEECSSEEEEEEEETT-CCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHHHH-HH---
T ss_pred CCEEEEEEEcCcCEEEEEECCC-CCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHHHH-HH---
Confidence 4699999999999999999974 99999999999876664 6775 678875 666665555443 32
Q ss_pred CCCCCCCeeEEEEcCCCceeEEEeCCCCc--------------------ccccceeeccCCCHHHHHHHHhhCCCCccch
Q psy9709 220 HGLSRDDIVTLGITNQRETTVVWDLNTGE--------------------PLYNAIVWSDTRADNIVDQVLAKFPDQDKDY 279 (500)
Q Consensus 220 ~~~~~~~I~~I~vs~~~~~~v~~d~~~G~--------------------~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~ 279 (500)
.++++.+|++||||+|++++|+||+ +|+ |++|+|+|+|.|+.++++++.+.++. .++
T Consensus 84 ~~~~~~~I~aIgis~q~~~~v~~D~-~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~~~~~~l~~~~~~--~~~ 160 (538)
T 4bc3_A 84 SGFDFSQVLALSGAGQQHGSIYWKA-GAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTTAQCRQLEAAVGG--AQA 160 (538)
T ss_dssp TTCCGGGEEEEEEEECSSCEEEEET-THHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCHHHHHHHHHHHTS--HHH
T ss_pred cCCChHHeEEEEecccceeEEEECC-CccccccccccccchhhhccccccccCCcccccCcHHHHHHHHHHhhCc--HHH
Confidence 5677889999999999999999999 565 99999999999999999999987642 367
Q ss_pred hhcccCCCCchhchHHHHHHHHhhChHHHHHhhcccccccchhHHHHHhhcCCCeee-eecccccccccccCCCCCCcHH
Q psy9709 280 LKPICGLPVSPYFSALKLSWLIQNVSSVRRAIKENRCLFGTVDTWLVWNLTGRTCHV-TDVTNASRTMLMNIDSLQWDPL 358 (500)
Q Consensus 280 ~~~~tG~~~~~~~~~~kl~Wl~~~~pe~~~~~~~~~~~~~~~~dyi~~~LTg~g~~~-~d~s~as~t~l~d~~~~~W~~~ 358 (500)
+++.||.++++.++++||+|+++|+||+|++++ +|++++|||.|+|| |+.+ +|+|+|++|++||+++++|+++
T Consensus 161 ~~~~tG~~~~~~~~~~kl~wl~~~~Pe~~~~~~----~~~~~~d~l~~~LT--G~~~~td~s~As~t~l~d~~~~~W~~~ 234 (538)
T 4bc3_A 161 LSCLTGSRAYERFTGNQIAKIYQQNPEAYSHTE----RISLVSSFAASLFL--GSYSPIDYSDGSGMNLLQIQDKVWSQA 234 (538)
T ss_dssp HHHHHSSCCCTTSHHHHHHHHHHHCHHHHHTEE----EEEEHHHHHHHHHH--TSCCCCBHHHHTTSSCEETTTTEECHH
T ss_pred HHHHHCCCCccccHHHHHHHHHHcCHHHHHHhh----eEEcHHHHHHHHHh--CCCcccccchhhcccccccccCCCCHH
Confidence 899999999999999999999999999999987 89999999999999 7787 9999999999999999999999
Q ss_pred HHhhcCCC-CCCCCCcccCCcccceeecC----Cc---------------------------------ceEEEEEeecC-
Q psy9709 359 LCKYFAVP-PTILPEIRSSSEIYGKVHSN----NG---------------------------------LVTTVAYQFGP- 399 (500)
Q Consensus 359 ll~~~gl~-~~~lP~i~~~~~~~G~~~~~----~G---------------------------------~~~~~~~~~~~- 399 (500)
+|+.+|++ .++||+|+++++++|.+... .| ....+....+.
T Consensus 235 ll~~~gi~~~~~LP~i~~~~~~~G~l~~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~~~~~g~~~~s~GTs~~~~~~~~~~ 314 (538)
T 4bc3_A 235 CLGACAPHLEEKLSPPVPSCSVVGAISSYYVQRYGFPPGCKVVAFTGDNPASLAGMRLEEGDIAVSLGTSDTLFLWLQEP 314 (538)
T ss_dssp HHHHHCTTHHHHHCCCBCSSCEEEECCHHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCTTCEEEEESSSEEEEEEESSC
T ss_pred HHHHhCccHHHHCCCcccccccccccCHHHHHHhCCCCCCeEEEecccHHhhhhccccCCCcEEEEeccchheEEecCCC
Confidence 99999998 78999999999999984321 01 11111111111
Q ss_pred -----------CC-CceeeechhhhchhHHHHHHHHHcCCCCCHHHHHHHHHhcC-CCCCeEEeccCCCCCCCCCCCCCc
Q psy9709 400 -----------DA-TPIYALEGSIAVAGAAVKWLRDNLNLMDNVRETESLAEKVM-TTGDVYFVPAFGGLYAPYWRKDAR 466 (500)
Q Consensus 400 -----------~~-p~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~P~~~G~r~P~~~~~~~ 466 (500)
.. ++.|..+++++++|.+++|+++.++. .+|+++++++++++ +++|++|+|||.|||+|+ +|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~~-~~~~~l~~~a~~~~~g~~gl~~lp~~~Ger~P~----~~ 389 (538)
T 4bc3_A 315 MPALEGHIFCNPVDSQHYMALLCFKNGSLMREKIRNESVS-RSWSDFSKALQSTEMGNGGNLGFYFDVMEITPE----II 389 (538)
T ss_dssp CCCSSSEEEEETTEEEEEEEEEEESSSHHHHHHHHHHHST-TCHHHHHHHHHTSCTTGGGCEEEEESSCCSSSC----CC
T ss_pred CCCCCcceEEeecCCCCEEEeehhhccchHHHHHHHHhcC-CCHHHHHHHHhcCCCCCCCeEEeecCCCCcCCC----CC
Confidence 11 24578888888999999999998863 57999999999887 899999999999999996 56
Q ss_pred EEEE------cCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Q psy9709 467 GVIC------GMTQFTTKGHIIRAALEAICFQTRDILELY 500 (500)
Q Consensus 467 g~f~------Gl~~~~~~~~l~rAv~Egia~~~~~~~~~~ 500 (500)
|.|+ |++. |+++||+||++||+||.+|.+++.|
T Consensus 390 G~~~~~~~~~g~~~-~~~~~l~RAvlEgia~~~r~~~~~l 428 (538)
T 4bc3_A 390 GRHRFNTENHKVAA-FPGDVEVRALIEGQFMAKRIHAEGL 428 (538)
T ss_dssp EEEEECTTSCEESC-CCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeeeccccccccC-CCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7775 2333 8999999999999999999999865
No 18
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=9.5e-54 Score=448.21 Aligned_cols=316 Identities=13% Similarity=0.120 Sum_probs=257.9
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
|++|++|||+|||++|+++||. +|+++...+.+++. .+++||.|||+++||+++++++++++ + .+|.+|
T Consensus 4 mm~~~lgIDiGTts~Ka~l~d~-~G~i~~~~~~~~~~-~~~~g~~eqdp~~~~~~~~~~i~~~~-~--------~~I~aI 72 (482)
T 3h6e_A 4 STGATIVIDLGKTLSKVSLWDL-DGRMLDRQVRPSIP-LEIDGIRRLDAPDTGRWLLDVLSRYA-D--------HPVTTI 72 (482)
T ss_dssp ----CEEEEECSSEEEEEEECT-TSCEEEEEEEECCC-EESSSCEECCHHHHHHHHHHHHHHTT-T--------SCCCEE
T ss_pred hhceEEEEEcCCCCeEEEEEEC-CCcEEEEEEecCCc-ccCCCceeECHHHHHHHHHHHHHHHH-h--------cCCCEE
Confidence 4568999999999999999996 59999999999985 57899999999999999999988875 2 579999
Q ss_pred EEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchh--chHHHHHHHHhhChHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPY--FSALKLSWLIQNVSSVR 308 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~--~~~~kl~Wl~~~~pe~~ 308 (500)
||++|++++++|| + |+|++|+|.|+|.|+.++++++.+..+ .++.||.+++++ ++++||+|+++|+||+|
T Consensus 73 gis~~~~~~v~~D-~-G~pl~~ai~w~D~R~~~~~~~l~~~~~------~~~~tG~~~~~~~~~~~~kl~Wl~~~~Pe~~ 144 (482)
T 3h6e_A 73 VPVGHGAGIAALT-D-GRLAFPPLDYEQSIPEAVMADYRSQRD------PFARTGSPALPDGLNIGSQLWWLDQLHPDVM 144 (482)
T ss_dssp EEEECSSCEEEEE-T-TEECSCCBCTTSCCCHHHHHHHHTTCC------CHHHHCCCCCSTTSSHHHHHHHHHHHSHHHH
T ss_pred EEecCcCCEEEEC-C-CCEeccccccCCcccHHHHHHHHhhCh------HHHHhCCCCCCCchhHHHHHHHHHHcCchhh
Confidence 9999999999999 5 999999999999999999999987542 268899999998 89999999999999999
Q ss_pred HHhhcccccccchhHHHHHhhcCCCeeeeeccc-ccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeec--
Q psy9709 309 RAIKENRCLFGTVDTWLVWNLTGRTCHVTDVTN-ASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHS-- 385 (500)
Q Consensus 309 ~~~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~-as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~-- 385 (500)
+++ . |++++|||.|+|| |+.++|+|+ ||+|++||+++++|+ ++|+.+||+ ++||+|+++++++|.+.+
T Consensus 145 ~~~----~-~l~~~dyl~~~LT--G~~~td~s~~As~t~l~d~~~~~W~-~ll~~~gi~-~~LP~v~~~~~~~G~l~~~~ 215 (482)
T 3h6e_A 145 ANA----T-LLPWAQYWAWFLT--GRAVSEVTSLGCHSDLWDPQDGDFS-PMAKRLGWA-ARFAPIVRAGDTVGALLPAI 215 (482)
T ss_dssp HSC----E-EEEHHHHHHHHTT--SCCCEEHHHHTTTCSSEETTTTEEC-HHHHHTTCG-GGBCCEECTTSEEEECCHHH
T ss_pred hcC----E-EEccHHHHHHHHh--CCeeeecchhhhccCCccCCcCcHH-HHHHHcCCH-HhCCCCcCCCceeeeeCHHH
Confidence 876 3 8999999999999 789999998 899999999999999 599999999 899999999999998321
Q ss_pred ------------------------C---Ccc-----eEEE-------EEeecC---C----CC--c--------eeeech
Q psy9709 386 ------------------------N---NGL-----VTTV-------AYQFGP---D----AT--P--------IYALEG 409 (500)
Q Consensus 386 ------------------------~---~G~-----~~~~-------~~~~~~---~----~p--~--------~~~~~g 409 (500)
. .|. ...+ ....+. . .| + .|.+++
T Consensus 216 A~~~GL~~g~pV~~g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 295 (482)
T 3h6e_A 216 AERTGLSPDVQVLAGLHDSNAALLAARGFAEIADNEATVLSTGTWFIAMRLPATPVDTATLPEARDCLVNVDVHGRPVPS 295 (482)
T ss_dssp HHHHTCCTTCEEECCEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEEEECSSCCCGGGCCGGGTEEEEECTTSCEEEE
T ss_pred HHHhCCCCCCEEEEeCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEEEecCccCCccccchhhceeeccccccccccc
Confidence 1 111 0011 111122 1 01 1 134566
Q ss_pred hhhchhHHHHHHHHHcCCCCC--HHHHHHHHHhc-CCCCCeEEeccCCCCCCCCCCCCCcEEEEcCCCCCCHHHHHHHHH
Q psy9709 410 SIAVAGAAVKWLRDNLNLMDN--VRETESLAEKV-MTTGDVYFVPAFGGLYAPYWRKDARGVICGMTQFTTKGHIIRAAL 486 (500)
Q Consensus 410 ~~~~~G~~~~w~~~~~~~~~~--~~~l~~~~~~~-~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~~~~~~~~l~rAv~ 486 (500)
...++|.+++|+++......+ ++..+.+++.. ++++|++|+|||.|+|+|+||+ ||+|+||+. +|++||++
T Consensus 296 ~~~~~G~~~~w~~~~~~~~~~~~~~~~~~~a~~~~~g~~Gl~flP~l~Ger~P~~d~--rG~~~Gl~~----~~l~RA~l 369 (482)
T 3h6e_A 296 ARFMGGREIETLIEIDTRRVDIKPDQPALLAAVPEVLRHGRMILPTLMRGFGPYPHG--RFAWINRPE----DWFERRAA 369 (482)
T ss_dssp EEECHHHHHHHHHCSGGGCTTCGGGHHHHHHTHHHHHHTTCEEESCSSTTCSSCTTC--CCEEESCCS----SHHHHHHH
T ss_pred hhhhhHHHHHHHHHhcccccccccchhhHHHhccccCCCCeEEecCCCCCCCCCCCC--ceEEeCCCH----HHHHHHHH
Confidence 677899999999654432211 22223233333 4889999999999999999987 999999999 79999999
Q ss_pred HH--HHHHHHHHHHhC
Q psy9709 487 EA--ICFQTRDILELY 500 (500)
Q Consensus 487 Eg--ia~~~~~~~~~~ 500 (500)
|+ +||++|+++|.|
T Consensus 370 E~~Gia~~~r~~l~~~ 385 (482)
T 3h6e_A 370 ACLYAALVADTALDLI 385 (482)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHhHHHHHHHHHHHh
Confidence 95 999999999876
No 19
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=3.1e-50 Score=425.32 Aligned_cols=322 Identities=16% Similarity=0.202 Sum_probs=262.0
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecc----cccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDIS----TISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDD 226 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~----~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 226 (500)
.+++++|||+|||++|++++|.+ |+++...+.++. ...+++||.+||+++||+++.++++++... ..+
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d~~-g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~-------~~~ 73 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLARYE-RECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA-------GIA 73 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEE-GGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT-------TCC
T ss_pred CcceEEEEEecCCCceEEEEEec-CccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC-------CCC
Confidence 35578999999999999999985 988776655433 235678999999999999999999887641 357
Q ss_pred eeEEEEcCCCceeEEEeCCCCcccccceeeccCCCHHHHHHHHhhCCCCccchhhcccCCCCchhchHHHHHHHHhhChH
Q psy9709 227 IVTLGITNQRETTVVWDLNTGEPLYNAIVWSDTRADNIVDQVLAKFPDQDKDYLKPICGLPVSPYFSALKLSWLIQNVSS 306 (500)
Q Consensus 227 I~~I~vs~~~~~~v~~d~~~G~~l~~~i~w~D~r~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe 306 (500)
|.+|||++|+++.++||+ +|+|++|+|.|+|.|+.++++++.+..+ .+.+++.||.++++.++++||+|+++|+||
T Consensus 74 i~~Igis~q~~~~v~~D~-~G~~l~~~i~w~D~R~~~~~~~l~~~~~---~~~~~~~tG~~~~~~~~~~kl~Wl~~~~P~ 149 (489)
T 2uyt_A 74 IDSIGIDTWGVDFVLLDQ-QGQRVGLPVAYRDSRTNGLMAQAQQQLG---KRDIYQRSGIQFLPFNTLYQLRALTEQQPE 149 (489)
T ss_dssp CCEEEEEECSSCEEEECT-TSCEESCCBCTTCGGGTTHHHHHHHHHC---HHHHHHHHCCCCCTTSHHHHHHHHHHHCGG
T ss_pred ceEEEEecCcccEEEECC-CCCCccCCccccCCccHHHHHHHHHhcC---HHHHHHHhCCCCCCccHHHHHHHHHhcCch
Confidence 999999999999999999 6999999999999999999999987654 257889999999999999999999999999
Q ss_pred HHHHhhcccccccchhHHHHHhhcCCCeeeeecccccccccccCCCCCCcHHHHhhcCCCCCCCCCcccCCcccceeecC
Q psy9709 307 VRRAIKENRCLFGTVDTWLVWNLTGRTCHVTDVTNASRTMLMNIDSLQWDPLLCKYFAVPPTILPEIRSSSEIYGKVHSN 386 (500)
Q Consensus 307 ~~~~~~~~~~~~~~~~dyi~~~LTg~g~~~~d~s~as~t~l~d~~~~~W~~~ll~~~gl~~~~lP~i~~~~~~~G~~~~~ 386 (500)
+|++++ +++.++|||.|+|| |++++|+|+|++|++||+++++|++++|+.+||+.++||+|+++++++|.+...
T Consensus 150 ~~~~~~----~~l~~~dyl~~~LT--G~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~ 223 (489)
T 2uyt_A 150 LIPHIA----HALLMPDYFSYRLT--GKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICP 223 (489)
T ss_dssp GGGGCC----EEEEHHHHHHHHHH--SCCCCBHHHHGGGTCEETTTTEECHHHHHHHTCCGGGSCCCBCTTCEEEEEECT
T ss_pred HHHHhh----hccCcHHHHHHHHh--CCccceehhhhhhcccccCcCccCHHHHHHcCCCHHHCCCccCCCcceeeeecc
Confidence 999887 88999999999999 779999999999999999999999999999999999999999999999985311
Q ss_pred C---------c------------------------ceEEEEEeec----------------CCCCceeeechhhhchhHH
Q psy9709 387 N---------G------------------------LVTTVAYQFG----------------PDATPIYALEGSIAVAGAA 417 (500)
Q Consensus 387 ~---------G------------------------~~~~~~~~~~----------------~~~p~~~~~~g~~~~~G~~ 417 (500)
. | ....+..... ...|+.|.+++.+. |
T Consensus 224 ~~~g~pV~~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g-- 299 (489)
T 2uyt_A 224 QGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTALAANITNEGGAEGRYRVLKNIM--G-- 299 (489)
T ss_dssp TCCEEEEECCCCBHHHHHHHHSCCCSTTEEEEEESSSEEEEEEESSCCCSHHHHHHTCEEECCGGGCEEEEEEEC--T--
T ss_pred cCCCCcEEEECchHHHHHHhcCCCCCCCcEEEEEchHhhcccccCCCccCHHHHhhcceeecCCCCeEEEehhHh--H--
Confidence 0 0 0011111100 01255666666544 2
Q ss_pred HHHHHHHcC---CCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCC-----CcEEEEcCC--CCCCHHHHHHHHHH
Q psy9709 418 VKWLRDNLN---LMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKD-----ARGVICGMT--QFTTKGHIIRAALE 487 (500)
Q Consensus 418 ~~w~~~~~~---~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~-----~~g~f~Gl~--~~~~~~~l~rAv~E 487 (500)
.|+++.+. ..+.|+.+.+.++..|++++ +|+| +|.|+++|+ ++|.|.|+. ..|+++||+||++|
T Consensus 300 -~W~~~~~~~~~~~~~~~~l~~~a~~~~~~~~-l~~p----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~l~RAvlE 373 (489)
T 2uyt_A 300 -LWLLQRVLQERQINDLPALIAATQALPACRF-IINP----NDDRFINPDEMCSEIQAACREMAQPIPESDAELARCIFD 373 (489)
T ss_dssp -THHHHHHHHHTTCCCHHHHHHHHTTSCSSSS-CCCT----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHHHHHHHHH
T ss_pred -HHHHHHhhcccchhhHHHHHHHhccCCCcCe-eECC----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 58877652 12457777666654557654 4788 577888887 589998884 78999999999999
Q ss_pred HHHHHHHHHHHhC
Q psy9709 488 AICFQTRDILELY 500 (500)
Q Consensus 488 gia~~~~~~~~~~ 500 (500)
|+||.+|+++|.|
T Consensus 374 gia~~~r~~~~~l 386 (489)
T 2uyt_A 374 SLALLYADVLHEL 386 (489)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999864
No 20
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=99.88 E-value=9.5e-23 Score=216.56 Aligned_cols=108 Identities=35% Similarity=0.597 Sum_probs=101.5
Q ss_pred cCcEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 22 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 101 (500)
Q Consensus 22 ~~~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~I 101 (500)
+|+|++|||+||||+|++|||. +|++++..+.+++..+|++||+||||++||+++++++++++++ .++++++|+||
T Consensus 2 ekkYvlgID~GTss~Ka~l~d~-~G~~va~~~~~~~~~~p~~G~~Eqdp~~~w~~~~~~i~~~l~~---~~~~~~~I~aI 77 (526)
T 3ezw_A 2 EKKYIVALDQGTTSSRAVVMDH-DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAI 77 (526)
T ss_dssp -CCEEEEEEECSSEEEEEEECT-TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEE
T ss_pred CceEEEEEEccccceeeeEEcC-CCCEEEEEEEecCcccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhhEEEE
Confidence 3568888999999999999998 9999999999999999999999999999999999999999988 78889999999
Q ss_pred EEcCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 102 GITNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 102 gis~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
|||+|++++|+||+++|+||+|+|+|+|+|..
T Consensus 78 gis~q~~~~v~~D~~~G~pl~~ai~W~D~R~~ 109 (526)
T 3ezw_A 78 GITNQRETTIVWEKETGKPIYNAIVWQCRRTA 109 (526)
T ss_dssp EEEECSSCBEEEETTTCCBSSCEECTTCCTTH
T ss_pred EEeCCCCCEEEEECCCCeEcccceecCCcchH
Confidence 99999999999997569999999999998874
No 21
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=99.82 E-value=1.8e-20 Score=197.89 Aligned_cols=102 Identities=24% Similarity=0.208 Sum_probs=95.5
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ .+ .+|++|||
T Consensus 4 ~~~lgIDiGtts~K~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~---~~I~~Igi 76 (504)
T 3ll3_A 4 KYIIGMDVGTTATKGVLYDI-NGKAVASVSKGYPLIQTKVGQAEEDPKLIFDAVQEIIFDLTQK---ID---GKIAAISW 76 (504)
T ss_dssp EEEEEEEECSSEEEEEEEET-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---CS---SEEEEEEE
T ss_pred CEEEEEEecCCceEEEEEcC-CCCEEEEEEeecceecCCCCcEEECHHHHHHHHHHHHHHHHHh---CC---CCeEEEEE
Confidence 46778999999999999998 9999999999999999999999999999999999999999876 43 68999999
Q ss_pred cCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
++|++++|+||+ +|+|++|+|+|+|.|..
T Consensus 77 s~q~~~~v~~D~-~G~pl~~~i~W~D~R~~ 105 (504)
T 3ll3_A 77 SSQMHSLIGLGS-DDELLTNSITWADNCAK 105 (504)
T ss_dssp EECSSCBEEECT-TSCBSSCEECTTCCTTH
T ss_pred ECCCCcEEEECC-CCCCcccceeCCccCHH
Confidence 999999999999 69999999999998875
No 22
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=99.81 E-value=3.2e-20 Score=196.32 Aligned_cols=104 Identities=21% Similarity=0.199 Sum_probs=97.7
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++ + .++++.+|.+|||
T Consensus 5 ~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~-~---~~~~~~~I~~Igi 79 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADR-DGGLHFQRSIALETYGDGNGPVEQDAGDWYDAVQRIASSWW-Q---SGVDARRVSAIVL 79 (511)
T ss_dssp CEEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBSTTSSCCEECHHHHHHHHHHHHHHHH-T---TTCCGGGEEEEEE
T ss_pred cEEEEEEeCCCceEEEEECC-CCCEEEEEEeecceecCCCCCEEECHHHHHHHHHHHHHHHH-h---cCCChhHeEEEEE
Confidence 36777999999999999998 89999999999999999999999999999999999999998 6 7777889999999
Q ss_pred cCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
++|++++|+||+ +|+|++|+|+|+|.|..
T Consensus 80 s~q~~~~v~~D~-~G~pl~~~i~W~D~R~~ 108 (511)
T 3hz6_A 80 SGQMQNFLPLDQ-DHEPLHRAVLYSDKRPL 108 (511)
T ss_dssp EECCSCBEEECT-TSCBSSCEECTTCCCCH
T ss_pred ecccccEEEECC-CcCCCcCceecCCCCHH
Confidence 999999999999 69999999999998874
No 23
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=99.81 E-value=6.2e-20 Score=194.41 Aligned_cols=109 Identities=39% Similarity=0.572 Sum_probs=99.9
Q ss_pred ccCcEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 21 TQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 100 (500)
Q Consensus 21 m~~~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 100 (500)
||+.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ .++++.+|.+
T Consensus 23 MM~~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~I~~ 98 (520)
T 4e1j_A 23 MMGGYILAIDQGTTSTRAIVFDG-NQKIAGVGQKEFKQHFPKSGWVEHDPEEIWQTVVSTVKEAIEK---SGITANDIAA 98 (520)
T ss_dssp CCSCEEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEEE
T ss_pred HhhCeEEEEEeCCcceEEEEECC-CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEE
Confidence 33457778999999999999998 9999999999999889999999999999999999999999877 7777889999
Q ss_pred EEEcCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 101 LGITNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 101 Igis~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
|||++|++++|+||+++|+|++|+|+|.|.|..
T Consensus 99 Igis~~g~~~v~~D~~~G~~l~~~i~W~D~R~~ 131 (520)
T 4e1j_A 99 IGITNQRETVVVWDRETGKPIHNAIVWQDRRTA 131 (520)
T ss_dssp EEEEECSSCEEEEETTTCCBSSCEECTTCCTTH
T ss_pred EEEeCCcceEEEEECCCCeECccccccccCCHH
Confidence 999999999999994379999999999998874
No 24
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=99.81 E-value=6.4e-20 Score=193.97 Aligned_cols=106 Identities=36% Similarity=0.608 Sum_probs=99.7
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ .++++.+|.+|||
T Consensus 3 ~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igi 78 (510)
T 2p3r_A 3 KYIVALDQGTTSSRAVVMDH-DANIISVSQREFEQIYPKPGWVEHDPMEIWATQSSTLVEVLAK---ADISSDQIAAIGI 78 (510)
T ss_dssp CEEEEEEECSSEEEEEEECT-TCCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEE
T ss_pred cEEEEEEcCCcceEEEEECC-CCCEEEEEEEecccccCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhheEEEEE
Confidence 46788999999999999998 9999999999999999999999999999999999999999988 7888889999999
Q ss_pred cCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
++|+|++|+||+++|+|++|+|+|+|.|..
T Consensus 79 s~~~~~~v~~D~~~G~~l~~~i~W~D~R~~ 108 (510)
T 2p3r_A 79 TNQRETTIVWEKETGKPIYNAIVWQCRRTA 108 (510)
T ss_dssp EECSSCBEEEETTTCCBSSCEECTTCCTTH
T ss_pred eCCcCcEEEEECCCCeECcccccccCccHH
Confidence 999999999999449999999999998875
No 25
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=99.81 E-value=5.5e-20 Score=194.38 Aligned_cols=107 Identities=35% Similarity=0.537 Sum_probs=99.6
Q ss_pred CcEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 23 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 102 (500)
Q Consensus 23 ~~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Ig 102 (500)
+.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ .++++.+|.+||
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Ig 79 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDR-NGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIE---SGIRPEAIAGIG 79 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEET-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEE
T ss_pred CCEEEEEEcCCCceEEEEECC-CCCEEEEEEEecCccCCCCCcEEECHHHHHHHHHHHHHHHHHH---cCCChhheEEEE
Confidence 357788999999999999998 9999999999999999999999999999999999999999887 677778999999
Q ss_pred EcCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 103 ITNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 103 is~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
|++|+|++++||+++|+|++|+|+|+|.|..
T Consensus 80 is~~~~~~v~~D~~~G~~l~~~i~w~D~R~~ 110 (506)
T 3h3n_X 80 ITNQRETTVVWDKTTGQPIANAIVWQSRQSS 110 (506)
T ss_dssp EEECSSCBEEEETTTCCBSSCEECTTCCTTH
T ss_pred eeCCcccEEEEeCCCCeECCCceEecCcchH
Confidence 9999999999999449999999999998875
No 26
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=99.81 E-value=5.5e-20 Score=194.37 Aligned_cols=105 Identities=20% Similarity=0.206 Sum_probs=98.8
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ .++++.+|.+|||
T Consensus 7 ~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~dp~~~~~~i~~~i~~~~~~---~~~~~~~I~~Igi 82 (508)
T 3ifr_A 7 RQVIGLDIGTTSTIAILVRL-PDTVVAVASRPTTLSSPHPGWAEEDPAQWWDNARAVLAELKTT---AGESDWRPGGICV 82 (508)
T ss_dssp CEEEEEEECSSEEEEEEEET-TTEEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---HCGGGCCEEEEEE
T ss_pred CEEEEEEecCcceEEEEECC-CCCEEEEEEEecceecCCCCceEECHHHHHHHHHHHHHHHHHh---cCCChhheEEEEE
Confidence 57788999999999999998 9999999999999999999999999999999999999999887 6677789999999
Q ss_pred cCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
++|++++|+||+ +|+|++|+|+|+|.|..
T Consensus 83 s~~~~~~v~~D~-~G~~l~~~i~W~D~R~~ 111 (508)
T 3ifr_A 83 TGMLPAVVLLDD-RGAVLRPSIQQSDGRCG 111 (508)
T ss_dssp EECSSCBEEECT-TSCBCSCEECTTCCCCH
T ss_pred ECCCCcEEEECC-CCCCcccceeccccChH
Confidence 999999999999 69999999999998874
No 27
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=99.79 E-value=2e-19 Score=189.94 Aligned_cols=106 Identities=37% Similarity=0.549 Sum_probs=99.1
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ .++++++|.+|||
T Consensus 6 ~~~lgIDiGtts~k~~l~d~-~G~il~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igi 81 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ-KGEIAGVAQREFKQYFPQSGWVEHDANEIWTSVLAVMTEVINE---NDVRADQIAGIGI 81 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHT---TTCCGGGEEEEEE
T ss_pred cEEEEEEeCccceEEEEEcC-CCCEEEEEEeecccccCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEE
Confidence 46778999999999999998 9999999999999999999999999999999999999999887 7777889999999
Q ss_pred cCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
++|+|++++||+++|+|++|+|+|+|.|..
T Consensus 82 s~~~~~~v~~D~~~G~~l~~~i~w~D~R~~ 111 (501)
T 3g25_A 82 TNQRETTVVWDKHTGRPIYHAIVWQSRQTQ 111 (501)
T ss_dssp EECSSCEEEEETTTCCBSSCEECTTCCTTH
T ss_pred ECCcCcEEEEECCCCeECCCceeeccCChH
Confidence 999999999999449999999999998875
No 28
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=99.79 E-value=1.4e-19 Score=193.48 Aligned_cols=104 Identities=25% Similarity=0.310 Sum_probs=97.3
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ .+++..+|.+|||
T Consensus 5 ~~~lgIDiGtts~ka~l~d~-~G~il~~~~~~~~~~~p~~g~~eqdp~~~~~~~~~~i~~~~~~---~~~~~~~I~~Igi 80 (554)
T 3l0q_A 5 SYFIGVDVGTGSARAGVFDL-QGRMVGQASREITMFKPKADFVEQSSENIWQAVCNAVRDAVNQ---ADINPIQVKGLGF 80 (554)
T ss_dssp CEEEEEEECSSEEEEEEEET-TSCEEEEEEEECCCEEEETTEEEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEEE
T ss_pred cEEEEEEECcccEEEEEECC-CCCEEEEEEEecccccCCCCccccCHHHHHHHHHHHHHHHHHH---cCCCHhHEEEEEE
Confidence 47788999999999999998 9999999999999999999999999999999999999999987 6777889999999
Q ss_pred cCCcceeEEeeCCCCCcc---------ccccccCCcccc
Q psy9709 104 TNQRETTVVWDLNTGEPL---------YNAIDKMPSLVY 133 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl---------~p~i~w~d~~~~ 133 (500)
++| +++|+||+ +|+|| +|+|+|+|.|..
T Consensus 81 s~~-~~~v~~D~-~G~pl~~~~~~~~~~~ai~W~D~Ra~ 117 (554)
T 3l0q_A 81 DAT-CSLVVLDK-EGNPLTVSPSGRNEQNVIVWMDHRAI 117 (554)
T ss_dssp EEC-SCEEEEET-TSCBCCCSTTCCTTCCEECTTCCTTH
T ss_pred cCC-CceEEECC-CCCEeeccCCCCCCCCcEEecccchH
Confidence 999 89999999 69999 899999998864
No 29
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=99.78 E-value=3.4e-19 Score=191.00 Aligned_cols=105 Identities=21% Similarity=0.325 Sum_probs=94.2
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeee-----eecCC------CCccccCHHHHHHHHHHHHHHHHHHHHhCC
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDIS-----TISPQ------EGWAEQDPMEILQAVQTTMDRAIEKLSAHG 92 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~-----~~~~~------~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~ 92 (500)
.+++|||+|||++|++|||.++|+++++.+.+++ ..+|+ +||+||||++||+++++++++++++ .+
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~~~G~i~~~~~~~~~~~~~~~~~p~~~~~~~~g~~eqdp~~~~~~~~~~i~~~l~~---~~ 81 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDLSNGQELADHVTPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTSVPAVMKE---SG 81 (572)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECTTCCBSSBSTTSCCBCCTTCCEECHHHHHHHHTTHHHHHHHC-----
T ss_pred CEEEEEecCCcceEEEEEECCCCeEEEEEEeccCCccccccCCccccCCCCCcEEECHHHHHHHHHHHHHHHHHH---cC
Confidence 4778899999999999999538999999999998 56777 9999999999999999999999877 67
Q ss_pred CCCCCeeEEEEcCCcceeEEeeCCCCCcccc-----------ccccCCccc
Q psy9709 93 LSRDDIVTLGITNQRETTVVWDLNTGEPLYN-----------AIDKMPSLV 132 (500)
Q Consensus 93 ~~~~~i~~Igis~~~~~~v~~d~~~g~pl~p-----------~i~w~d~~~ 132 (500)
+++.+|.+|||++|++++|+||+ +|+|++| +|+|+|.|.
T Consensus 82 ~~~~~I~~Igis~q~~~~v~~D~-~G~pl~~~~~~~~~p~~~ai~W~D~R~ 131 (572)
T 3jvp_A 82 VDADDVIGIGVDFTACTMLPVDE-EGQPLCLLAQYKDNPHSWVKLWKHHAA 131 (572)
T ss_dssp -CCSCEEEEEEEECSSCEEEECT-TSCBGGGSSSTTSSGGGSEECTTCCTT
T ss_pred CChhHEEEEEEecCCCcEEEECC-CCCCCccCccccccccccceecCccch
Confidence 77889999999999999999999 6999999 899999886
No 30
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=99.77 E-value=6.8e-19 Score=185.75 Aligned_cols=105 Identities=33% Similarity=0.524 Sum_probs=98.0
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||.||||++||+++++++++++++ .+++.++|.+|||
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~-~g~~~~~~~~~~~~~~p~~g~~e~d~~~~~~~~~~~i~~~~~~---~~~~~~~i~~Igi 78 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR-ESNIHGIGQYEFPQHYPRPGWVEHNPEEIWDAQLRAIKDAIQS---ARIEPNQIAAIGV 78 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT-TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHH---HTCCGGGEEEEEE
T ss_pred cEEEEEecCCchhEEEEECC-CCCEEEEEEeccceecCCCCcEEECHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEE
Confidence 36778999999999999998 9999999999999889999999999999999999999999887 6677788999999
Q ss_pred cCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
++|+|++|+||+ +|+|++|+|+|+|.|..
T Consensus 79 s~~~~~~v~~D~-~G~~l~~~i~w~D~R~~ 107 (497)
T 2zf5_O 79 TNQRETTLVWDK-DGKPLYNAIVWQCRRTA 107 (497)
T ss_dssp EECSSCEEEECT-TCCBSSCEECTTCCTTH
T ss_pred ecCCCcEEEECC-CCCCcccceeecccCcH
Confidence 999999999999 79999999999998864
No 31
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=99.75 E-value=2.2e-18 Score=182.07 Aligned_cols=106 Identities=33% Similarity=0.503 Sum_probs=96.9
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhC--CCCCCCeeEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAH--GLSRDDIVTL 101 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~--~~~~~~i~~I 101 (500)
.+++|||+|||++|++|||. +|+++++.+.+++..+|++||.||||++||+++++++++++++ . +++.++|.+|
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~-~g~i~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~~~i~~I 79 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDE-ELNIVHSNNLNHEQKCLKPGWYEHDPIEIMTNLYNLMNEGIKV---LKDKYTSVIIKCI 79 (503)
T ss_dssp EEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCCBCCSTTCCEECHHHHHHHHHHHHHHHHHH---HHHHSSSCEEEEE
T ss_pred cEEEEEEeCCcceEEEEECC-CCCEEEEEEEeeeeecCCCCcEEECHHHHHHHHHHHHHHHHHH---hhcCCCccceEEE
Confidence 36778999999999999998 9999999999999888999999999999999999999999876 4 4556789999
Q ss_pred EEcCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 102 GITNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 102 gis~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
||++|+|++++||+++|+|++|+|.|.|.|..
T Consensus 80 gis~~~~~~~~~D~~~G~~l~~~i~w~D~r~~ 111 (503)
T 2w40_A 80 GITNQRETVIIWDRITGKPLYNAIVWLDTRVE 111 (503)
T ss_dssp EEEECSSCEEEEETTTCCBSSCEECTTCCTTH
T ss_pred EEcCCcceEEEEECCCCcCCccceeecccCcH
Confidence 99999999999999459999999999998863
No 32
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=99.75 E-value=1e-18 Score=182.84 Aligned_cols=96 Identities=11% Similarity=0.077 Sum_probs=87.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|||++|+++||. +|+++++.+.+++. ++.+||+||||++||+++++++++++ + .+|.+|||+
T Consensus 7 ~~lgIDiGTts~Ka~l~d~-~G~i~~~~~~~~~~-~~~~g~~eqdp~~~~~~~~~~i~~~~-~--------~~I~aIgis 75 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDL-DGRMLDRQVRPSIP-LEIDGIRRLDAPDTGRWLLDVLSRYA-D--------HPVTTIVPV 75 (482)
T ss_dssp -CEEEEECSSEEEEEEECT-TSCEEEEEEEECCC-EESSSCEECCHHHHHHHHHHHHHHTT-T--------SCCCEEEEE
T ss_pred eEEEEEcCCCCeEEEEEEC-CCcEEEEEEecCCc-ccCCCceeECHHHHHHHHHHHHHHHH-h--------cCCCEEEEe
Confidence 5677999999999999997 99999999999985 58899999999999999999998874 2 579999999
Q ss_pred CCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 105 NQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
+|++++|+|| + |+|++|+|+|+|+|..
T Consensus 76 ~~~~~~v~~D-~-G~pl~~ai~w~D~R~~ 102 (482)
T 3h6e_A 76 GHGAGIAALT-D-GRLAFPPLDYEQSIPE 102 (482)
T ss_dssp ECSSCEEEEE-T-TEECSCCBCTTSCCCH
T ss_pred cCcCCEEEEC-C-CCEeccccccCCcccH
Confidence 9999999999 6 9999999999998875
No 33
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=99.75 E-value=3.8e-18 Score=180.24 Aligned_cols=104 Identities=36% Similarity=0.615 Sum_probs=97.6
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|||++|++|||. +|+++++.+.+++..+|++||.||||++||+++++++++++++ .+++..+|.+|||+
T Consensus 3 ~~lgiDiGtts~k~~l~d~-~G~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igis 78 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDH-SGEIYSTGQLEHDQIFPRAGWVEHNPEQIWNNVREVVGLALTR---GNLTHEDIAAVGIT 78 (504)
T ss_dssp EEEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEE
T ss_pred EEEEEecCCcceEEEEECC-CCCEEEEEEEecceecCCCCceeECHHHHHHHHHHHHHHHHHH---cCCCcccEEEEEEe
Confidence 5778999999999999998 9999999999999889999999999999999999999999887 77777889999999
Q ss_pred CCcceeEEeeCCCCCccccccccCCccc
Q psy9709 105 NQRETTVVWDLNTGEPLYNAIDKMPSLV 132 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p~i~w~d~~~ 132 (500)
+|+|++++||+++|+|++|+|.|.|.|.
T Consensus 79 ~~g~~~v~vD~~~G~~l~~~i~w~D~R~ 106 (504)
T 2d4w_A 79 NQRETAVVWDKTTGKPVYNAIVWQDTRT 106 (504)
T ss_dssp ECSSCBEEEETTTCCBSSCEECTTCCTT
T ss_pred CCCCeEEEEECCCCCCccccceecccCh
Confidence 9999999999945999999999999886
No 34
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=99.75 E-value=3.1e-18 Score=180.67 Aligned_cols=104 Identities=32% Similarity=0.570 Sum_probs=97.1
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|||++|++|||. +|+++++.+.+++..+|.+||.||||++||+++++++++++++ .+++..+|.+|||+
T Consensus 3 ~~lgiDiGtT~~k~~l~d~-~g~i~~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~~~~~~~i~~Igis 78 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTL-EGRPVAVAKREFRQLYPKPGWVEHDPLEIWETTLWAAREVLRR---AGAEAGEVLALGIT 78 (495)
T ss_dssp CEEEEEECSSEEEEEEECT-TSCEEEEEEEECCEECSSTTCCEECHHHHHHHHHHHHHHHHHH---TTCCGGGCCEEEEE
T ss_pred EEEEEeeCCcceEEEEECC-CCCEEEEEEEeeceecCCCCcEeeCHHHHHHHHHHHHHHHHHh---cCCCcccEEEEEEe
Confidence 5677999999999999998 9999999999999889999999999999999999999999887 77777889999999
Q ss_pred CCcceeEEeeCCCCCccccccccCCccc
Q psy9709 105 NQRETTVVWDLNTGEPLYNAIDKMPSLV 132 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p~i~w~d~~~ 132 (500)
+|+|++++||+++|+|++|+|.|.|.|.
T Consensus 79 ~~~~~~~~vD~~~G~~l~~~i~w~D~R~ 106 (495)
T 2dpn_A 79 NQRETTLLWDRKTGKPLHNAIVWQDRRT 106 (495)
T ss_dssp ECSSCBEEEETTTCCBSSCEECTTCCTT
T ss_pred CCCccEEEEECCCCcCCccceeecccCh
Confidence 9999999999945999999999999875
No 35
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=99.73 E-value=9.8e-18 Score=176.35 Aligned_cols=101 Identities=27% Similarity=0.317 Sum_probs=93.8
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 105 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~ 105 (500)
++|||+|||++|+++||. +|+++++.+.+++..+|++||+||||++||+++++++++++++ . ..++|.+|||++
T Consensus 2 ~lgiDiGtt~~k~~l~d~-~g~~l~~~~~~~~~~~p~~g~~e~d~~~~~~~i~~~i~~~~~~---~--~~~~i~~Igis~ 75 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE-QGEVVAAQTEKLTVSRPHPLWSEQDPEQWWQATDRAMKALGDQ---H--SLQDVKALGIAG 75 (484)
T ss_dssp EEEEEECSSEEEEEEECT-TSCEEEEEEEECCCBCSSTTCCEECHHHHHHHHHHHHHHHHHH---S--CCTTCCEEEEEE
T ss_pred EEEEEecCcccEEEEECC-CCCEEEEEEeccccccCCCCCEeECHHHHHHHHHHHHHHHHHh---C--CccceEEEEEcC
Confidence 467999999999999998 9999999999999999999999999999999999999999876 3 256899999999
Q ss_pred CcceeEEeeCCCCCccccccccCCcccc
Q psy9709 106 QRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 106 ~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
|+|++|+||+ +|+|++|+|.|.|.|..
T Consensus 76 ~~~~~v~~D~-~G~~l~~~i~w~D~R~~ 102 (484)
T 2itm_A 76 QMHGATLLDA-QQRVLRPAILWNDGRCA 102 (484)
T ss_dssp CSSCBEEECT-TCCBCSCEECTTCCTTH
T ss_pred CcCcEEEECC-CcCCCcccceecccCcH
Confidence 9999999999 69999999999998874
No 36
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=99.71 E-value=1e-17 Score=178.18 Aligned_cols=104 Identities=15% Similarity=0.209 Sum_probs=87.4
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCC----CCcc-------ccCHH-HHHHHHHHHHHHHHHHHHhC
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQ----EGWA-------EQDPM-EILQAVQTTMDRAIEKLSAH 91 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~----~g~~-------e~d~~-~~~~~~~~~i~~~~~~~~~~ 91 (500)
.+++|||+|||++|++|||. +|+++++.+.+|+..+|. +||+ ||||+ .||+++..+++ .+++ .
T Consensus 10 ~~~lgID~GTts~Ka~l~d~-~G~vv~~~~~~~~~~~p~~~~~~g~~e~~~g~~eqdp~~~w~~~~~~~~~-~l~~---~ 84 (538)
T 4bc3_A 10 RCCLGWDFSTQQVKVVAVDA-ELNVFYEESVHFDRDLPEFGTQGGVHVHKDGLTVTSPVLMWVQALDIILE-KMKA---S 84 (538)
T ss_dssp CEEEEEEECSSEEEEEEEET-TCCEEEEEEEEHHHHSGGGCCBTTBEECTTSSCEEEEHHHHHHHHHHHHH-HHHH---T
T ss_pred CEEEEEEEcCcCEEEEEECC-CCCEEEEEEEecCCcCCcccCCCCeeecCCCccccCcHHHHHHHHHHHHH-HHHH---c
Confidence 47888999999999999998 999999999999876664 6664 67887 46666655554 4455 7
Q ss_pred CCCCCCeeEEEEcCCcceeEEeeCCCCC--------------------ccccccccCCcccc
Q psy9709 92 GLSRDDIVTLGITNQRETTVVWDLNTGE--------------------PLYNAIDKMPSLVY 133 (500)
Q Consensus 92 ~~~~~~i~~Igis~~~~~~v~~d~~~g~--------------------pl~p~i~w~d~~~~ 133 (500)
++++++|++||||+|+|++|+||+ +|+ |++|+|+|+|.|..
T Consensus 85 ~~~~~~I~aIgis~q~~~~v~~D~-~g~~~l~~l~~~~~l~~~~~~~~pl~~ai~W~D~R~~ 145 (538)
T 4bc3_A 85 GFDFSQVLALSGAGQQHGSIYWKA-GAQQALTSLSPDLRLHQQLQDCFSISDCPVWMDSSTT 145 (538)
T ss_dssp TCCGGGEEEEEEEECSSCEEEEET-THHHHHHTCCTTSCHHHHHTTCBSCSEEECTTCCCCH
T ss_pred CCChHHeEEEEecccceeEEEECC-CccccccccccccchhhhccccccccCCcccccCcHH
Confidence 778899999999999999999999 565 99999999998874
No 37
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=99.70 E-value=3.3e-17 Score=173.15 Aligned_cols=95 Identities=21% Similarity=0.213 Sum_probs=84.3
Q ss_pred CcEEEEEecCCCcceEEEEe-CCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 23 VPLIGVIDEGTRTVRFAIIS-ALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 101 (500)
Q Consensus 23 ~~~i~giDiGtt~~k~~v~d-~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~I 101 (500)
+.+++|||+|||++|++||| . +|+++++.+.++ +||+||||++||++++++++++ +. .++|.+|
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~-~G~i~~~~~~~~------~g~~e~d~~~~~~~i~~~l~~~-------~~-~~~I~~I 68 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTDAE-TGELVRFGQAKH------PNGTSVDPSYWWSAFQEAAEQA-------GG-LDDVSAL 68 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEETT-TCCEEEEEEEEC------CSSSEECTHHHHHHHHHHHHHT-------TC-STTEEEE
T ss_pred CcEEEEEEeccccEEEEEEECC-CCeEEEEEEEeC------CCCceECHHHHHHHHHHHHHhc-------CC-ccCceEE
Confidence 35778899999999999999 8 899999988776 4899999999999988877643 33 5789999
Q ss_pred EEcCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 102 GITNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 102 gis~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
||++|++++|+||+ +|+|++|+|+|+|.|..
T Consensus 69 gis~q~~~~v~~D~-~G~pl~~~i~W~D~R~~ 99 (515)
T 3i8b_A 69 AVGGQQHGMVILDN-QGNVIRDAMLWNDTSSA 99 (515)
T ss_dssp EEEECSSCBEEECT-TSCBCSCEECTTCCTTH
T ss_pred EEeCCcceEEEECC-CCCCcCCcceecCCCHH
Confidence 99999999999999 79999999999998864
No 38
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=99.68 E-value=3.6e-17 Score=172.36 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=89.1
Q ss_pred cCcEEEEEecCCCcceEEEEeCCCCcEEEEEEeeee----eecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9709 22 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDIS----TISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDD 97 (500)
Q Consensus 22 ~~~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~----~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 97 (500)
++.+++|||+|||++|++|||. +|+++...+.++. ...+.+||.|+||++||+++.++++++... ..+
T Consensus 2 ~~~~~lgiDiGtts~k~~l~d~-~g~~~~~~~~~~~~~~~~~~~~~g~~e~d~~~~~~~i~~~~~~~~~~-------~~~ 73 (489)
T 2uyt_A 2 TFRNCVAVDLGASSGRVMLARY-ERECRSLTLREIHRFNNGLHSQNGYVTWDVDSLESAIRLGLNKVCAA-------GIA 73 (489)
T ss_dssp CCEEEEEEEECSSEEEEEEEEE-EGGGTEEEEEEEEEEECCCEEETTEEECCHHHHHHHHHHHHHHHHHT-------TCC
T ss_pred CcceEEEEEecCCCceEEEEEe-cCccceEEEEEEeecCCCccccCCeEEECHHHHHHHHHHHHHHHHhC-------CCC
Confidence 3456788999999999999998 8999987766654 245788999999999999999999987642 357
Q ss_pred eeEEEEcCCcceeEEeeCCCCCccccccccCCcccc
Q psy9709 98 IVTLGITNQRETTVVWDLNTGEPLYNAIDKMPSLVY 133 (500)
Q Consensus 98 i~~Igis~~~~~~v~~d~~~g~pl~p~i~w~d~~~~ 133 (500)
|.+|||++|+|++++||+ +|+|++|+|+|.|.|..
T Consensus 74 i~~Igis~q~~~~v~~D~-~G~~l~~~i~w~D~R~~ 108 (489)
T 2uyt_A 74 IDSIGIDTWGVDFVLLDQ-QGQRVGLPVAYRDSRTN 108 (489)
T ss_dssp CCEEEEEECSSCEEEECT-TSCEESCCBCTTCGGGT
T ss_pred ceEEEEecCcccEEEECC-CCCCccCCccccCCccH
Confidence 999999999999999999 59999999999998874
No 39
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.53 E-value=3.1e-07 Score=90.96 Aligned_cols=91 Identities=19% Similarity=0.291 Sum_probs=72.4
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+++. +.+++++++.+.+.+++++++ .+++..+|.+|||
T Consensus 6 ~~~lgiDiggt~~~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~~igi 73 (326)
T 2qm1_A 6 KKIIGIDLGGTTIKFAILTT-DGVVQQKWSIETNI--------LEDGKHIVPSIIESIRHRIDL---YNMKKEDFVGIGM 73 (326)
T ss_dssp CEEEEEEECSSEEEEEEEET-TCCEEEEEEEECCC--------TTTTTTHHHHHHHHHHHHHHH---TTCCGGGEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC-CCCEEEEEEEcCCC--------CCCHHHHHHHHHHHHHHHHHH---cCCCccceeEEEE
Confidence 46777999999999999998 89999887776642 357888999999999999887 6666678999999
Q ss_pred cCCcceeEEeeCCCCCcc-ccccccCCc
Q psy9709 104 TNQRETTVVWDLNTGEPL-YNAIDKMPS 130 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl-~p~i~w~d~ 130 (500)
+..+ ++|.++|..+ .|.+.|.+.
T Consensus 74 ~~pG----~vd~~~g~v~~~~~l~w~~~ 97 (326)
T 2qm1_A 74 GTPG----SVDIEKGTVVGAYNLNWTTV 97 (326)
T ss_dssp EESS----EEETTTTEEECBGGGTBCSC
T ss_pred eccc----ceeCCCCEEEecCCCCccCC
Confidence 9877 6787556654 444567644
No 40
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=98.42 E-value=4.9e-07 Score=89.51 Aligned_cols=94 Identities=19% Similarity=0.314 Sum_probs=72.8
Q ss_pred ccCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 150 TQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 229 (500)
Q Consensus 150 ~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~ 229 (500)
.|+.+++|||+|+|++|++++|.. |+++...+.+++. .++++++++.+.+++++++++ .+++..+|.+
T Consensus 3 ~m~~~~lgiDiggt~~~~~l~d~~-g~il~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~~ 70 (326)
T 2qm1_A 3 AMDKKIIGIDLGGTTIKFAILTTD-GVVQQKWSIETNI--------LEDGKHIVPSIIESIRHRIDL---YNMKKEDFVG 70 (326)
T ss_dssp GGGCEEEEEEECSSEEEEEEEETT-CCEEEEEEEECCC--------TTTTTTHHHHHHHHHHHHHHH---TTCCGGGEEE
T ss_pred CcccEEEEEEECCCEEEEEEECCC-CCEEEEEEEcCCC--------CCCHHHHHHHHHHHHHHHHHH---cCCCccceeE
Confidence 455799999999999999999985 9999877766542 146778999999999988875 3455567999
Q ss_pred EEEcCCCceeEEEeCCCCccc-ccceeeccC
Q psy9709 230 LGITNQRETTVVWDLNTGEPL-YNAIVWSDT 259 (500)
Q Consensus 230 I~vs~~~~~~v~~d~~~G~~l-~~~i~w~D~ 259 (500)
|+++.++ ++|.++|..+ .|.+.|.+.
T Consensus 71 igi~~pG----~vd~~~g~v~~~~~l~w~~~ 97 (326)
T 2qm1_A 71 IGMGTPG----SVDIEKGTVVGAYNLNWTTV 97 (326)
T ss_dssp EEEEESS----EEETTTTEEECBGGGTBCSC
T ss_pred EEEeccc----ceeCCCCEEEecCCCCccCC
Confidence 9999887 8887556655 345568665
No 41
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=98.34 E-value=1.8e-06 Score=84.71 Aligned_cols=73 Identities=18% Similarity=0.209 Sum_probs=57.0
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCe--eEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDI--VTL 101 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i--~~I 101 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+.. . ..++++++++.+.+.+++++++ .+.+.++| .+|
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~-~G~il~~~~~~~~------~-~~~~~~~~~~~l~~~i~~~l~~---~~~~~~~i~~~~i 79 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHAS-DGTPLAMAEGGAS------A-LSQGIAKSWQAVLSTLEAAFQQ---AGLPAAPASACAI 79 (305)
T ss_dssp CEEEEEEECSSCEEEEEEET-TCCEEEEEEESCC------C-GGGCHHHHHHHHHHHHHHHHHH---TTCCCCCGGGEEE
T ss_pred CEEEEEEcCccceEEEEEcC-CCCEEEEEeCCCC------C-cccCHHHHHHHHHHHHHHHHHh---cCCChhhhccceE
Confidence 46788999999999999998 8999987654321 1 2368999999999999999887 67767777 566
Q ss_pred EEcCCc
Q psy9709 102 GITNQR 107 (500)
Q Consensus 102 gis~~~ 107 (500)
||+..+
T Consensus 80 gig~pG 85 (305)
T 1zc6_A 80 GLGLSG 85 (305)
T ss_dssp EEEESC
T ss_pred EEEecC
Confidence 666444
No 42
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.30 E-value=1e-06 Score=89.31 Aligned_cols=90 Identities=13% Similarity=0.138 Sum_probs=70.9
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+++ .+++++++++.+.+.+++++++ .+.+..+|.+|||
T Consensus 87 ~~~lGIDiGgt~i~~~l~d~-~G~vl~~~~~~~~--------~~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~gigi 154 (380)
T 2hoe_A 87 AYVLGIEVTRDEIAACLIDA-SMNILAHEAHPLP--------SQSDREETLNVMYRIIDRAKDM---MEKLGSKLSALTV 154 (380)
T ss_dssp CEEEEEEECSSEEEEEEEET-TCCEEEEEEEECC--------SSCCHHHHHHHHHHHHHHHHHH---HHHTTCCCCEEEE
T ss_pred CeEEEEEECCCEEEEEEECC-CCCEEEEEEEccC--------CCCCHHHHHHHHHHHHHHHHHh---cCCCcCcEEEEEE
Confidence 46788999999999999998 8999988776654 2357999999999999999876 4444578999999
Q ss_pred cCCcceeEEeeCCCCCcc-ccccccCC
Q psy9709 104 TNQRETTVVWDLNTGEPL-YNAIDKMP 129 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl-~p~i~w~d 129 (500)
+..+ ++|.++|..+ .|.+.|.+
T Consensus 155 ~~pG----~vd~~~g~v~~~~~l~w~~ 177 (380)
T 2hoe_A 155 AAPG----PIDTERGIIIDPRNFPLSQ 177 (380)
T ss_dssp EESS----CEETTTTEECCCSSCTTBT
T ss_pred Eeec----cEECCCCEEeccCCCCCcC
Confidence 9777 6787457665 35556764
No 43
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.30 E-value=1.9e-06 Score=88.75 Aligned_cols=89 Identities=15% Similarity=0.152 Sum_probs=72.4
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+++ .++++++++.+.+.+++++++ .+.+..+|.+|||
T Consensus 108 ~~~lGIDiGgt~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~gigi 174 (429)
T 1z05_A 108 WQFLSMRLGRGYLTIALHEL-GGEVLIDTKIDIH---------EIDQDDVLARLLFEIEEFFQT---YAAQLDRVTSIAI 174 (429)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEEEECC---------CCBHHHHHHHHHHHHHHHHHH---TTTTCCEEEEEEE
T ss_pred CEEEEEEECCCEEEEEEECC-CCCEEEEEEEcCC---------CCCHHHHHHHHHHHHHHHHHh---cCCCcCceEEEEE
Confidence 46788999999999999998 8999988776653 236899999999999999887 6777778999999
Q ss_pred cCCcceeEEeeCCCCCcc-ccccccCC
Q psy9709 104 TNQRETTVVWDLNTGEPL-YNAIDKMP 129 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl-~p~i~w~d 129 (500)
+..+ ++|.++|..+ .|.+.|.+
T Consensus 175 ~~pG----~vd~~~g~v~~~~~l~w~~ 197 (429)
T 1z05_A 175 TLPG----LVNSEQGIVLQMPHYNVKN 197 (429)
T ss_dssp EESS----EEETTTTEEEECSSSBCSS
T ss_pred eccC----cEeCCCCeEeecCCCCCCC
Confidence 9888 7787557665 45566764
No 44
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.26 E-value=1.7e-06 Score=88.49 Aligned_cols=89 Identities=15% Similarity=0.159 Sum_probs=70.7
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+++ +++++++++.+.+++++++++ .+.+..+|.+|||
T Consensus 85 ~~~lgiDiG~t~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~gigi 151 (406)
T 1z6r_A 85 WHYLSLRISRGEIFLALRDL-SSKLVVEESQELA---------LKDDLPLLDRIISHIDQFFIR---HQKKLERLTSIAI 151 (406)
T ss_dssp CEEEEEEEETTEEEEEEEET-TCCEEEEEEEECC---------SSCSSCHHHHHHHHHHHHHHH---TGGGCCCEEEEEE
T ss_pred cEEEEEEEcCCEEEEEEEcC-CCCEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHh---cCCCcCceeEEEE
Confidence 46788999999999999998 8999988766552 357888999999999999887 6666678999999
Q ss_pred cCCcceeEEeeCCCCCccc-ccc-ccCC
Q psy9709 104 TNQRETTVVWDLNTGEPLY-NAI-DKMP 129 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~-p~i-~w~d 129 (500)
+..+ ++|.++|..+. |.+ -|.+
T Consensus 152 ~~pG----~vd~~~g~v~~~~~l~~w~~ 175 (406)
T 1z6r_A 152 TLPG----IIDTENGIVHRMPFYEDVKE 175 (406)
T ss_dssp EESS----EEETTTTEEEECTTCTTCSS
T ss_pred Eeec----CEeCCCCEEecCCCCCCccC
Confidence 9888 67875566653 333 4764
No 45
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=98.25 E-value=2.4e-06 Score=85.32 Aligned_cols=74 Identities=12% Similarity=0.160 Sum_probs=59.9
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCC-CeeEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRD-DIVTLG 102 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~-~i~~Ig 102 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+. ..+.+++++++++.+.+++++++++ .+...+ +|.+||
T Consensus 6 ~~~lgiDiGgt~~~~~l~d~-~g~i~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~~~~---~~~~~~~~i~gig 75 (347)
T 2ch5_A 6 AIYGGVEGGGTRSEVLLVSE-DGKILAEADGLS------TNHWLIGTDKCVERINEMVNRAKRK---AGVDPLVPLRSLG 75 (347)
T ss_dssp CEEEEEEECTTCEEEEEEET-TSCEEEEEEECC------CCHHHHCHHHHHHHHHHHHHHHHHH---HTCCTTCCBSEEE
T ss_pred eEEEEEEcCccceEEEEEeC-CCCEEEEEeCCC------CCcccCCHHHHHHHHHHHHHHHHHh---cCCCcccceeEEE
Confidence 36778999999999999998 899998765422 1234568999999999999999877 555556 799999
Q ss_pred EcCCc
Q psy9709 103 ITNQR 107 (500)
Q Consensus 103 is~~~ 107 (500)
|+..+
T Consensus 76 i~~pG 80 (347)
T 2ch5_A 76 LSLSG 80 (347)
T ss_dssp EEETT
T ss_pred EeccC
Confidence 98777
No 46
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.21 E-value=5.1e-06 Score=85.49 Aligned_cols=97 Identities=13% Similarity=0.087 Sum_probs=75.3
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
...+++|||+|+|++|++++|.+ |+++...+.+++ .++++++++.+.+++++++++ .+.+..+|.+|
T Consensus 106 ~~~~~lGIDiGgt~i~~~l~d~~-G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~gi 172 (429)
T 1z05_A 106 LGWQFLSMRLGRGYLTIALHELG-GEVLIDTKIDIH---------EIDQDDVLARLLFEIEEFFQT---YAAQLDRVTSI 172 (429)
T ss_dssp TTEEEEEEEEETTEEEEEEEETT-SCEEEEEEEECC---------CCBHHHHHHHHHHHHHHHHHH---TTTTCCEEEEE
T ss_pred CCCEEEEEEECCCEEEEEEECCC-CCEEEEEEEcCC---------CCCHHHHHHHHHHHHHHHHHh---cCCCcCceEEE
Confidence 34579999999999999999985 999987766554 136889999999999998875 45556789999
Q ss_pred EEcCCCceeEEEeCCCCccc-ccceeeccCCCHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPL-YNAIVWSDTRADNI 264 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l-~~~i~w~D~r~~~~ 264 (500)
||+.++ ++|.++|..+ .|.+.|.+..-.+.
T Consensus 173 gi~~pG----~vd~~~g~v~~~~~l~w~~~~l~~~ 203 (429)
T 1z05_A 173 AITLPG----LVNSEQGIVLQMPHYNVKNLALGPE 203 (429)
T ss_dssp EEEESS----EEETTTTEEEECSSSBCSSBCHHHH
T ss_pred EEeccC----cEeCCCCeEeecCCCCCCCCCHHHH
Confidence 999888 8887557665 35667877654443
No 47
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.21 E-value=4.8e-06 Score=82.50 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=66.5
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. +|+++.+.+.+++ +.+++++++.+.+.++++.++ . ..+.+|||+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~---~----~~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNE-KLERVATERVPTP---------TDDYPLLLETIAGLVAKYDQE---F----ACEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECT-TCCEEEEEEEECC---------TTCHHHHHHHHHHHHHHHHHH---H----TSCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeC-CCcEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHh---c----CCccEEEEE
Confidence 3567999999999999998 9999988776654 237899999999999998765 2 247788888
Q ss_pred CCcceeEEeeCCCCCccccccccC
Q psy9709 105 NQRETTVVWDLNTGEPLYNAIDKM 128 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p~i~w~ 128 (500)
..+ ++|.++|....|.+.|.
T Consensus 88 ~pG----~vd~~~g~v~~~~~~~~ 107 (327)
T 4db3_A 88 LPG----MEDADDATVLTVNVPAA 107 (327)
T ss_dssp ESE----EECTTTCCEEESSSGGG
T ss_pred eec----cEeCCCCEEEcCCCccc
Confidence 766 77865688888877774
No 48
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=98.14 E-value=4.6e-06 Score=85.23 Aligned_cols=97 Identities=12% Similarity=0.118 Sum_probs=73.1
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
...+++|||+|+|++|++++|.+ |+++...+.+++ .++++++++.+.+++++++++ .+.+..+|.+|
T Consensus 83 ~~~~~lgiDiG~t~i~~~l~d~~-G~il~~~~~~~~---------~~~~~~~~~~l~~~i~~~~~~---~~~~~~~i~gi 149 (406)
T 1z6r_A 83 EAWHYLSLRISRGEIFLALRDLS-SKLVVEESQELA---------LKDDLPLLDRIISHIDQFFIR---HQKKLERLTSI 149 (406)
T ss_dssp TTCEEEEEEEETTEEEEEEEETT-CCEEEEEEEECC---------SSCSSCHHHHHHHHHHHHHHH---TGGGCCCEEEE
T ss_pred CccEEEEEEEcCCEEEEEEEcCC-CCEEEEEEecCC---------CCCHHHHHHHHHHHHHHHHHh---cCCCcCceeEE
Confidence 34579999999999999999985 999987766552 246778999999999988875 34456789999
Q ss_pred EEcCCCceeEEEeCCCCcccc-cce-eeccCCCHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLY-NAI-VWSDTRADNI 264 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~-~~i-~w~D~r~~~~ 264 (500)
||+.++ ++|.++|..+. |.+ .|.+..-.+.
T Consensus 150 gi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~~ 181 (406)
T 1z6r_A 150 AITLPG----IIDTENGIVHRMPFYEDVKEMPLGEA 181 (406)
T ss_dssp EEEESS----EEETTTTEEEECTTCTTCSSBCHHHH
T ss_pred EEEeec----CEeCCCCEEecCCCCCCccCCCHHHH
Confidence 999888 78874566653 444 5876554333
No 49
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.14 E-value=3.1e-06 Score=83.59 Aligned_cols=90 Identities=17% Similarity=0.220 Sum_probs=68.9
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 232 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~v 232 (500)
+|++|||+|+|++|++++|.+ |+++...+.+++ ++++++++.+.+.++++.++ .+|.+|++
T Consensus 2 ~~~lgiDiGgt~i~~~l~d~~-G~i~~~~~~~~~----------~~~~~~~~~i~~~i~~~~~~--------~~i~gigi 62 (321)
T 3vgl_A 2 GLTIGVDIGGTKIAAGVVDEE-GRILSTFKVATP----------PTAEGIVDAICAAVAGASEG--------HDVEAVGI 62 (321)
T ss_dssp CEEEEEEECSSEEEEEEECTT-CCBCCCEEEECC----------SSHHHHHHHHHHHHHHHHTT--------CCEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECCC-CCEEEEEEeeCC----------CCHHHHHHHHHHHHHHHHhh--------cCceEEEE
Confidence 489999999999999999985 999876655542 46889999998888887632 47999999
Q ss_pred cCCCceeEEEeCCCCcccc-cceeeccCCCHHHH
Q psy9709 233 TNQRETTVVWDLNTGEPLY-NAIVWSDTRADNIV 265 (500)
Q Consensus 233 s~~~~~~v~~d~~~G~~l~-~~i~w~D~r~~~~~ 265 (500)
+.++ ++|.++|.... |.+.|.+.+-.+.+
T Consensus 63 ~~pG----~vd~~~g~v~~~~~l~w~~~~l~~~l 92 (321)
T 3vgl_A 63 GAAG----YVDDKRATVLFAPNIDWRHEPLKDKV 92 (321)
T ss_dssp EESS----EECTTSSCEEECSSSCCEEECHHHHH
T ss_pred eccc----cEeCCCCEEEeCCCCCCcCCCHHHHH
Confidence 9887 88875465543 55678776654443
No 50
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.14 E-value=4.5e-06 Score=83.22 Aligned_cols=88 Identities=17% Similarity=0.069 Sum_probs=67.2
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+++ ++++++++.+.+.+++++++ .+....+|.+|||
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~----------~~~~~~~~~i~~~i~~~~~~---~~~~~~~i~gigi 95 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSM-KGEIVKKYTQFNP----------KTYEERINLILQMCVEAAAE---AVKLNCRILGVGI 95 (343)
T ss_dssp EEEEEEEECSSEEEEEEEET-TSCEEEEEEEECC----------SSHHHHHHHHHHHHHHHHHH---HHHTTEEEEEEEE
T ss_pred cEEEEEEECCCEEEEEEECC-CCcEEEEEEEcCC----------CCHHHHHHHHHHHHHHHHHh---cccccCceEEEEE
Confidence 46788999999999999998 8999987765442 36888999999999998766 2223467999999
Q ss_pred cCCcceeEEeeCCCCCccc-ccc--ccCC
Q psy9709 104 TNQRETTVVWDLNTGEPLY-NAI--DKMP 129 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~-p~i--~w~d 129 (500)
+..+ ++|.++|..+. |.+ -|.+
T Consensus 96 ~~pG----~vd~~~g~v~~~~~~~~~w~~ 120 (343)
T 2yhw_A 96 STGG----RVNPREGIVLHSTKLIQEWNS 120 (343)
T ss_dssp EESS----EEETTTTEEEECCTTSSSCSS
T ss_pred eccc----CEeCCCCEEEeCCcCCCCCcC
Confidence 9888 77875576653 323 4753
No 51
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=98.14 E-value=3.3e-06 Score=85.54 Aligned_cols=97 Identities=14% Similarity=0.166 Sum_probs=73.6
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
..+++|||+|+|++|++++|.+ |+++...+.+++. .++++++++.+.+++++++++.. .+..+|.+||
T Consensus 86 ~~~~lGIDiGgt~i~~~l~d~~-G~vl~~~~~~~~~--------~~~~~~~~~~l~~~i~~~~~~~~---~~~~~i~gig 153 (380)
T 2hoe_A 86 CAYVLGIEVTRDEIAACLIDAS-MNILAHEAHPLPS--------QSDREETLNVMYRIIDRAKDMME---KLGSKLSALT 153 (380)
T ss_dssp GCEEEEEEECSSEEEEEEEETT-CCEEEEEEEECCS--------SCCHHHHHHHHHHHHHHHHHHHH---HTTCCCCEEE
T ss_pred CCeEEEEEECCCEEEEEEECCC-CCEEEEEEEccCC--------CCCHHHHHHHHHHHHHHHHHhcC---CCcCcEEEEE
Confidence 3578999999999999999985 9999877666541 24789999999999999887642 3346789999
Q ss_pred EcCCCceeEEEeCCCCcccc-cceeeccCCCHHH
Q psy9709 232 ITNQRETTVVWDLNTGEPLY-NAIVWSDTRADNI 264 (500)
Q Consensus 232 vs~~~~~~v~~d~~~G~~l~-~~i~w~D~r~~~~ 264 (500)
|+.++ ++|.++|..+. |.+.|.+..-.+.
T Consensus 154 i~~pG----~vd~~~g~v~~~~~l~w~~~~l~~~ 183 (380)
T 2hoe_A 154 VAAPG----PIDTERGIIIDPRNFPLSQIPLANL 183 (380)
T ss_dssp EEESS----CEETTTTEECCCSSCTTBTSCHHHH
T ss_pred EEeec----cEECCCCEEeccCCCCCcCCChHHH
Confidence 99887 78875576653 5567876654433
No 52
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.14 E-value=4.4e-06 Score=82.53 Aligned_cols=87 Identities=11% Similarity=0.132 Sum_probs=67.5
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+++ ...+++++++.+.+.++++++. ..+|.+|||
T Consensus 19 ~~~lgidiggt~i~~~l~d~-~g~il~~~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~-------~~~i~gigi 82 (321)
T 3r8e_A 19 GMILGIDVGGTSVKFGLVTP-EGEIQNATRFMTA--------DWVNGIGFVESMKLEIGNFLKQ-------YPIVKGVGI 82 (321)
T ss_dssp CCEEEEECCSSEEEEEEECT-TCCEEEEEEEEHH--------HHHTTTCHHHHHHHHHHHHHHH-------CTTCCEEEE
T ss_pred cEEEEEEECCCEEEEEEEcC-CCcEEEEEEEeCC--------CCCCHHHHHHHHHHHHHHHHhc-------cCCeeEEEE
Confidence 45677999999999999998 8999998877664 2346788999999999888753 357899999
Q ss_pred cCCcceeEEeeCCCCCccccccc--cCCc
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAID--KMPS 130 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~--w~d~ 130 (500)
+..+ ++|.++|..+.+... |.+-
T Consensus 83 ~~pG----~vd~~~g~v~~~~~l~~w~~~ 107 (321)
T 3r8e_A 83 GWPG----LVSLDRTKVILLPNIPSVVNV 107 (321)
T ss_dssp EESS----EECTTSCCEEEBTTBCCCCSC
T ss_pred Eecc----cEECCCCEEEeCCCCccccCC
Confidence 9877 778546877654433 8753
No 53
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=98.09 E-value=8.1e-06 Score=80.86 Aligned_cols=89 Identities=12% Similarity=0.109 Sum_probs=68.5
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
+++|||+|+|++|++++|.+ |+++...+.+++. .+++++++.+.+.++++..+. ..+.+|||+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~-------~~~~gigi~ 87 (327)
T 4db3_A 25 MYYGFDVGGTKIEFGAFNEK-LERVATERVPTPT---------DDYPLLLETIAGLVAKYDQEF-------ACEGKIGLG 87 (327)
T ss_dssp CEEEEEECSSEEEEEEECTT-CCEEEEEEEECCT---------TCHHHHHHHHHHHHHHHHHHH-------TSCCEEEEE
T ss_pred EEEEEEECCCEEEEEEEeCC-CcEEEEEEecCCC---------CCHHHHHHHHHHHHHHHHHhc-------CCccEEEEE
Confidence 78999999999999999985 9999877766541 268899999988888887652 246788988
Q ss_pred CCCceeEEEeCCCCcccccceee-ccCCCHH
Q psy9709 234 NQRETTVVWDLNTGEPLYNAIVW-SDTRADN 263 (500)
Q Consensus 234 ~~~~~~v~~d~~~G~~l~~~i~w-~D~r~~~ 263 (500)
.++ ++|.++|....+.+.| .+.+-.+
T Consensus 88 ~pG----~vd~~~g~v~~~~~~~~~~~~l~~ 114 (327)
T 4db3_A 88 LPG----MEDADDATVLTVNVPAAKGKPLRA 114 (327)
T ss_dssp ESE----EECTTTCCEEESSSGGGTTSCHHH
T ss_pred eec----cEeCCCCEEEcCCCccccCCCHHH
Confidence 776 8896568777777777 4444333
No 54
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=98.09 E-value=6.2e-06 Score=81.45 Aligned_cols=82 Identities=17% Similarity=0.195 Sum_probs=64.2
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. +|+++.+.+.++ +.+++++++.+.+.++++.++ .+|.+|||+
T Consensus 3 ~~lgiDiGgt~i~~~l~d~-~G~i~~~~~~~~----------~~~~~~~~~~i~~~i~~~~~~--------~~i~gigi~ 63 (321)
T 3vgl_A 3 LTIGVDIGGTKIAAGVVDE-EGRILSTFKVAT----------PPTAEGIVDAICAAVAGASEG--------HDVEAVGIG 63 (321)
T ss_dssp EEEEEEECSSEEEEEEECT-TCCBCCCEEEEC----------CSSHHHHHHHHHHHHHHHHTT--------CCEEEEEEE
T ss_pred EEEEEEECCCEEEEEEECC-CCCEEEEEEeeC----------CCCHHHHHHHHHHHHHHHHhh--------cCceEEEEe
Confidence 6778999999999999998 999998777665 247899999999999888632 479999999
Q ss_pred CCcceeEEeeCCCCCccc-cccccCC
Q psy9709 105 NQRETTVVWDLNTGEPLY-NAIDKMP 129 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~-p~i~w~d 129 (500)
..+ ++|.++|.... |.+.|.+
T Consensus 64 ~pG----~vd~~~g~v~~~~~l~w~~ 85 (321)
T 3vgl_A 64 AAG----YVDDKRATVLFAPNIDWRH 85 (321)
T ss_dssp ESS----EECTTSSCEEECSSSCCEE
T ss_pred ccc----cEeCCCCEEEeCCCCCCcC
Confidence 777 77874455442 4455653
No 55
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=98.03 E-value=9.7e-06 Score=80.81 Aligned_cols=96 Identities=17% Similarity=0.112 Sum_probs=70.4
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
..+++|||+|+|++|++++|.+ |+++...+.+++ ++++++++.+.+.+++++++.. ....+|.+|+
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~~----------~~~~~~~~~i~~~i~~~~~~~~---~~~~~i~gig 94 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMK-GEIVKKYTQFNP----------KTYEERINLILQMCVEAAAEAV---KLNCRILGVG 94 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETT-SCEEEEEEEECC----------SSHHHHHHHHHHHHHHHHHHHH---HTTEEEEEEE
T ss_pred CcEEEEEEECCCEEEEEEECCC-CcEEEEEEEcCC----------CCHHHHHHHHHHHHHHHHHhcc---cccCceEEEE
Confidence 3589999999999999999985 999987655443 3678889999888888876532 2345799999
Q ss_pred EcCCCceeEEEeCCCCcccc-cce--eeccCCCHHHH
Q psy9709 232 ITNQRETTVVWDLNTGEPLY-NAI--VWSDTRADNIV 265 (500)
Q Consensus 232 vs~~~~~~v~~d~~~G~~l~-~~i--~w~D~r~~~~~ 265 (500)
++.++ ++|.++|..+. |.+ .|.+..-.+.+
T Consensus 95 i~~pG----~vd~~~g~v~~~~~~~~~w~~~~l~~~l 127 (343)
T 2yhw_A 95 ISTGG----RVNPREGIVLHSTKLIQEWNSVDLRTPL 127 (343)
T ss_dssp EEESS----EEETTTTEEEECCTTSSSCSSEECHHHH
T ss_pred Eeccc----CEeCCCCEEEeCCcCCCCCcCCCHHHHH
Confidence 99888 88875566653 333 47665544433
No 56
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=98.00 E-value=7.8e-06 Score=80.73 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=70.3
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
...+++|||+|+|++|++++|.. |+++...+.+++. ..+++++++.+.+.++++++. ..+|.+|
T Consensus 17 ~~~~~lgidiggt~i~~~l~d~~-g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~-------~~~i~gi 80 (321)
T 3r8e_A 17 FQGMILGIDVGGTSVKFGLVTPE-GEIQNATRFMTAD--------WVNGIGFVESMKLEIGNFLKQ-------YPIVKGV 80 (321)
T ss_dssp --CCEEEEECCSSEEEEEEECTT-CCEEEEEEEEHHH--------HHTTTCHHHHHHHHHHHHHHH-------CTTCCEE
T ss_pred cCcEEEEEEECCCEEEEEEEcCC-CcEEEEEEEeCCC--------CCCHHHHHHHHHHHHHHHHhc-------cCCeeEE
Confidence 45679999999999999999985 9999887776652 236677888888888887642 3578999
Q ss_pred EEcCCCceeEEEeCCCCcccc-ccee-eccCCCHHH
Q psy9709 231 GITNQRETTVVWDLNTGEPLY-NAIV-WSDTRADNI 264 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~-~~i~-w~D~r~~~~ 264 (500)
||+.++ ++|.++|..+. +.+. |.+.+..+.
T Consensus 81 gi~~pG----~vd~~~g~v~~~~~l~~w~~~~l~~~ 112 (321)
T 3r8e_A 81 GIGWPG----LVSLDRTKVILLPNIPSVVNVPIVEI 112 (321)
T ss_dssp EEEESS----EECTTSCCEEEBTTBCCCCSCCHHHH
T ss_pred EEEecc----cEECCCCEEEeCCCCccccCCCHHHH
Confidence 999887 88964577664 4555 887665443
No 57
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.92 E-value=1e-05 Score=77.83 Aligned_cols=118 Identities=14% Similarity=0.085 Sum_probs=71.5
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. +|+++.+.+.+++. ||. +++.++++++.+ .++...+|.+|+++
T Consensus 4 ~~lGiD~Gst~~k~~l~d~-~g~i~~~~~~~~~~----------~~~---~~~~~~l~~l~~----~~~~~~~i~~i~~T 65 (270)
T 1hux_A 4 YTLGIDVGSTASKCIILKD-GKEIVAKSLVAVGT----------GTS---GPARSISEVLEN----AHMKKEDMAFTLAT 65 (270)
T ss_dssp EEEEEEECSSEEEEEEEET-TTEEEEEEEEECCS----------SCC---HHHHHHHHHHHH----HTCCGGGCSEEEEE
T ss_pred EEEEEEeccceEEEEEEeC-CCCEEEEEEecCCC----------CHH---HHHHHHHHHHHH----cCCChhHEEEEEEe
Confidence 5677999999999999998 89999988776641 332 345555666543 13455678999999
Q ss_pred CCcceeEEeeCCCCCccccccccCCccccCCCCCCCCCCCCccccccCCEEEEEeccCCCceEEEEeCCCCeEEEE
Q psy9709 105 NQRETTVVWDLNTGEPLYNAIDKMPSLVYNTPPEPSSNTNNNSIQTQVPLIGVIDEGTRTVRFAIISALTQEEVVS 180 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p~i~w~d~~~~~~t~~~~~~~~n~~~~~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~ 180 (500)
++++.++.- ..+.-+.|.++.. .... ....... ..||+|+..+|++.+. +|+++..
T Consensus 66 G~g~~~~~~-------------~~~~~v~Ei~ah~--~ga~-~~~~~~~--~vidiGGqd~k~i~~~--~g~v~~~ 121 (270)
T 1hux_A 66 GYGRNSLEG-------------IADKQMSELSCHA--MGAS-FIWPNVH--TVIDIGGQDVKVIHVE--NGTMTNF 121 (270)
T ss_dssp STTTTTTTT-------------TCSEEECHHHHHH--HHHH-HHCTTCC--EEEEEETTEEEEEEEE--TTEEEEE
T ss_pred Cccccchhh-------------cCCCCcccHHHHH--HHHH-HhCCCCC--EEEEECCCceEEEEEe--CCceeee
Confidence 998654410 0111111111000 0000 0000111 3599999999999995 3887643
No 58
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.86 E-value=2e-05 Score=76.87 Aligned_cols=55 Identities=9% Similarity=0.106 Sum_probs=45.6
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHH
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIE 86 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~ 86 (500)
+++|||+|+|++|++++|. +|+++.+.+.++ +++.+++++++++.+.+.++++++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~-~g~i~~~~~~~~------~~~~~~~~~~~~~~i~~~i~~~~~ 57 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDC-EGNFIGEGSSGP------GNYHNVGLTRAIENIKEAVKIAAK 57 (299)
T ss_dssp CEEEEEECSSCEEEEEECT-TSCEEEEEEESC------CCHHHHCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCcEEEEEEcC-CCCEEEEEeCCC------CCcccCCHHHHHHHHHHHHHHHHh
Confidence 5677999999999999998 899998776554 233467899999999999998864
No 59
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.84 E-value=1.5e-05 Score=78.22 Aligned_cols=86 Identities=10% Similarity=0.156 Sum_probs=63.8
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|. +|+++.+.+.+++ +.+++++++.+.+.+++++++ .+ .+|.+|||
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~---~~---~~i~gigi 70 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTA-EGETLHCEKKRTA---------EVIAPGLVSGIGEMIDEQLRR---FN---ARCHGLVM 70 (310)
T ss_dssp EEEEEEEECSSEEEEEEEET-TSCEEEEEEEEHH---------HHHTTCHHHHHHHHHHHHHHH---HT---EEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEECC-CCCEEEEEEecCc---------cccHHHHHHHHHHHHHHHHHh---cC---CCeeEEEE
Confidence 46788999999999999998 9999988776553 223566888888888887665 22 35899999
Q ss_pred cCCcceeEEeeCCCCCcc-ccccccCC
Q psy9709 104 TNQRETTVVWDLNTGEPL-YNAIDKMP 129 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl-~p~i~w~d 129 (500)
+..+ ++|.++|..+ .|.+.|.+
T Consensus 71 ~~pG----~vd~~~g~v~~~~~l~~~~ 93 (310)
T 3htv_A 71 GFPA----LVSKDKRTIISTPNLPLTA 93 (310)
T ss_dssp EESS----CBCTTSSCBCSCCSSSCCH
T ss_pred eccc----cEeCCCCEEEeCCCCCCcc
Confidence 9776 6787556665 34566753
No 60
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=97.82 E-value=1e-05 Score=79.51 Aligned_cols=87 Identities=9% Similarity=0.136 Sum_probs=63.6
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
..+++|||+|+|++|++++|.+ |+++...+.+++. .+++++++.+.+.+++++++. ..+|.+||
T Consensus 6 ~~~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~------~~~i~gig 69 (310)
T 3htv_A 6 HNVVAGVDMGATHIRFCLRTAE-GETLHCEKKRTAE---------VIAPGLVSGIGEMIDEQLRRF------NARCHGLV 69 (310)
T ss_dssp EEEEEEEEECSSEEEEEEEETT-SCEEEEEEEEHHH---------HHTTCHHHHHHHHHHHHHHHH------TEEEEEEE
T ss_pred CCEEEEEEeCCCEEEEEEECCC-CCEEEEEEecCcc---------ccHHHHHHHHHHHHHHHHHhc------CCCeeEEE
Confidence 3589999999999999999985 9999877665541 224567777777777766542 12589999
Q ss_pred EcCCCceeEEEeCCCCcccc-cceeecc
Q psy9709 232 ITNQRETTVVWDLNTGEPLY-NAIVWSD 258 (500)
Q Consensus 232 vs~~~~~~v~~d~~~G~~l~-~~i~w~D 258 (500)
|+.++ ++|.++|..+. |.+.|.+
T Consensus 70 i~~pG----~vd~~~g~v~~~~~l~~~~ 93 (310)
T 3htv_A 70 MGFPA----LVSKDKRTIISTPNLPLTA 93 (310)
T ss_dssp EEESS----CBCTTSSCBCSCCSSSCCH
T ss_pred Eeccc----cEeCCCCEEEeCCCCCCcc
Confidence 99887 78875566653 5567765
No 61
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=97.79 E-value=3.3e-05 Score=76.96 Aligned_cols=102 Identities=11% Similarity=0.100 Sum_probs=70.9
Q ss_pred ccCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCC-Cee
Q psy9709 150 TQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRD-DIV 228 (500)
Q Consensus 150 ~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~-~I~ 228 (500)
+|+.+++|||+|+|++|++++|.+ |+++...+.+.. .+.+++++++++.+.+++++++++. +.+.. +|.
T Consensus 3 ~M~~~~lgiDiGgt~~~~~l~d~~-g~i~~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~~~~~---~~~~~~~i~ 72 (347)
T 2ch5_A 3 FMAAIYGGVEGGGTRSEVLLVSED-GKILAEADGLST------NHWLIGTDKCVERINEMVNRAKRKA---GVDPLVPLR 72 (347)
T ss_dssp SSSCEEEEEEECTTCEEEEEEETT-SCEEEEEEECCC------CHHHHCHHHHHHHHHHHHHHHHHHH---TCCTTCCBS
T ss_pred ccceEEEEEEcCccceEEEEEeCC-CCEEEEEeCCCC------CcccCCHHHHHHHHHHHHHHHHHhc---CCCccccee
Confidence 345599999999999999999985 999877654221 1123578999999999999988753 44455 799
Q ss_pred EEEEcCCCceeEEEeCCCCcc--------c----ccceeeccCCCHHHH
Q psy9709 229 TLGITNQRETTVVWDLNTGEP--------L----YNAIVWSDTRADNIV 265 (500)
Q Consensus 229 ~I~vs~~~~~~v~~d~~~G~~--------l----~~~i~w~D~r~~~~~ 265 (500)
+||++.+| ++|.+.+.+ + .|+...+|.++....
T Consensus 73 gigi~~pG----~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a 117 (347)
T 2ch5_A 73 SLGLSLSG----GDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT 117 (347)
T ss_dssp EEEEEETT----TTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH
T ss_pred EEEEeccC----CCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh
Confidence 99998887 444310111 1 356667777666554
No 62
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=97.74 E-value=9e-05 Score=72.45 Aligned_cols=77 Identities=18% Similarity=0.192 Sum_probs=58.0
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCe--eEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDI--VTL 230 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I--~~I 230 (500)
+|++|||+|+|++|++++|.+ |+++...+.+.. + + .++++++++.+.+++++++++ .+.+..+| .+|
T Consensus 11 ~~~lGiDiGgT~i~~~l~d~~-G~il~~~~~~~~-----~-~-~~~~~~~~~~l~~~i~~~l~~---~~~~~~~i~~~~i 79 (305)
T 1zc6_A 11 RYLIGVDGGGTGTRIRLHASD-GTPLAMAEGGAS-----A-L-SQGIAKSWQAVLSTLEAAFQQ---AGLPAAPASACAI 79 (305)
T ss_dssp CEEEEEEECSSCEEEEEEETT-CCEEEEEEESCC-----C-G-GGCHHHHHHHHHHHHHHHHHH---TTCCCCCGGGEEE
T ss_pred CEEEEEEcCccceEEEEEcCC-CCEEEEEeCCCC-----C-c-ccCHHHHHHHHHHHHHHHHHh---cCCChhhhccceE
Confidence 599999999999999999975 999877654321 0 1 257889999999999998865 35556666 677
Q ss_pred EEcCCCceeEEEeC
Q psy9709 231 GITNQRETTVVWDL 244 (500)
Q Consensus 231 ~vs~~~~~~v~~d~ 244 (500)
+++.++ ++|.
T Consensus 80 gig~pG----~v~~ 89 (305)
T 1zc6_A 80 GLGLSG----VHNR 89 (305)
T ss_dssp EEEESC----CCTT
T ss_pred EEEecC----CCch
Confidence 777665 4565
No 63
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=97.71 E-value=0.00011 Score=72.42 Aligned_cols=81 Identities=12% Similarity=0.114 Sum_probs=59.0
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. +|+++.+.+.+++. .+++++.+.+.+.++++... . ..+.+|||+
T Consensus 25 ~~lgiDiGgt~i~~~l~d~-~g~il~~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~---~----~~i~~igi~ 87 (327)
T 2ap1_A 25 MYYGFDIGGTKIALGVFDS-TRRLQWEKRVPTPH---------TSYSAFLDAVCELVEEADQR---F----GVKGSVGIG 87 (327)
T ss_dssp EEEEEEECSSEEEEEEEET-TCCEEEEEEEECCC---------SCHHHHHHHHHHHHHHHHHH---H----TSCCEEEEE
T ss_pred eEEEEEECCCEEEEEEEeC-CCCEEEEEEecCCC---------CCHHHHHHHHHHHHHHHHHh---c----CCccEEEEE
Confidence 5778999999999999998 89999887665531 25778888888888887755 2 246777777
Q ss_pred CCcceeEEeeCCCCCccccccc
Q psy9709 105 NQRETTVVWDLNTGEPLYNAID 126 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p~i~ 126 (500)
..+ ++|.++|..+.+.+.
T Consensus 88 ~pG----~vd~~~g~v~~~~~~ 105 (327)
T 2ap1_A 88 IPG----MPETEDGTLYAANVP 105 (327)
T ss_dssp ESS----BSCCTTSCCBCTTCT
T ss_pred eee----eEECCCCEEEccCCC
Confidence 666 567644655543333
No 64
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.64 E-value=0.00014 Score=70.73 Aligned_cols=80 Identities=19% Similarity=0.273 Sum_probs=56.1
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. +|+++.+.+.+++ ..+++++++.+.+. +++ ..+|.+|||+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~~~---------~~~~~~~~~~i~~~----~~~-------~~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLP-HGEIILTKSAEIS---------GSDGDQILAEMKVF----LAE-------NTDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECT-TSCEEEEEEEECS---------TTCHHHHHHHHHHH----HHT-------CTTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECC-CCCEEEEEEecCC---------CCCHHHHHHHHHHH----Hhh-------cCCeeEEEEe
Confidence 4677999999999999998 9999998776653 12455555554433 322 2578999999
Q ss_pred CCcceeEEeeCCCCCcccc-cc-ccCC
Q psy9709 105 NQRETTVVWDLNTGEPLYN-AI-DKMP 129 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p-~i-~w~d 129 (500)
..+ ++|.++|..+.+ .+ -|.+
T Consensus 64 ~pG----~vd~~~g~v~~~~~l~~w~~ 86 (297)
T 4htl_A 64 APG----YVNPKTGLITMGGAIRRFDN 86 (297)
T ss_dssp ESS----EECTTTCEEEECTTCGGGTT
T ss_pred cCc----ceeCCCCEEEeCCCCCCccC
Confidence 877 778656776653 33 3754
No 65
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.62 E-value=6.3e-05 Score=73.48 Aligned_cols=84 Identities=11% Similarity=0.125 Sum_probs=59.3
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. + +++.+.+.+++ ..+++++++.+.+.++++.++ . ..+|.+|||+
T Consensus 2 ~~lgiDiGgt~i~~~l~d~-~-~~l~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~---~---~~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDG-K-RLLSKVVVPTP---------KEGGERVAEALAEAAERAERE---A---GVRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECS-S-SBSCCEEEECC---------SSCHHHHHHHHHHHHHHHHHH---H---TCCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeC-C-CcEEEEEEcCC---------CCChHHHHHHHHHHHHHHHhh---c---cCCceEEEEE
Confidence 4677999999999999998 6 45565555543 234588999999999988765 2 3578889988
Q ss_pred CCcceeEEeeCCCCCccc-ccc-ccCC
Q psy9709 105 NQRETTVVWDLNTGEPLY-NAI-DKMP 129 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~-p~i-~w~d 129 (500)
..+ ++|.++|.... |.+ -|.+
T Consensus 65 ~pG----~vd~~~g~v~~~~~~~~w~~ 87 (302)
T 3vov_A 65 TPG----PLDFRRGVIRFAPNIPGVQD 87 (302)
T ss_dssp ESS----CEETTTTEEC---CCTTCTT
T ss_pred ecc----cEeCCCCEEEcCCCCCCcCC
Confidence 766 67875565553 333 3653
No 66
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=97.59 E-value=8.2e-05 Score=71.45 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=58.3
Q ss_pred hhhchhHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCeEEeccCCCCCCCCCCCCCcEEEEcCC-CCCCHHHHHHHHHHH
Q psy9709 410 SIAVAGAAVKWLRDNLNLMDNVRETESLAEKVMTTGDVYFVPAFGGLYAPYWRKDARGVICGMT-QFTTKGHIIRAALEA 488 (500)
Q Consensus 410 ~~~~~G~~~~w~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~P~~~G~r~P~~~~~~~g~f~Gl~-~~~~~~~l~rAv~Eg 488 (500)
|...+|..++|+.+.|+. +++++++++.+.+ .|+..|+|.+. -+++.++++. .+++++|++||++|+
T Consensus 127 ca~GtG~~le~~a~~lg~--~~~el~~la~~~~-------~p~~~~~~c~v---fa~s~v~~l~~~g~~~~di~~av~e~ 194 (270)
T 1hux_A 127 CAAGTGRFLDVMANILEV--KVSDLAELGAKST-------KRVAISSTCTV---FAESEVISQLSKGTDKIDIIAGIHRS 194 (270)
T ss_dssp CCTTSHHHHHHHHHHHTC--CTTTHHHHHTTCC-------SCCCCCCCSHH---HHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHhCC--CHHHHHHHHhhCC-------CCCCcccccch---hHhHHHHHHhhCCCCHHHHHHHHHHH
Confidence 444568899999998864 5777888876533 56767777652 2566677776 789999999999999
Q ss_pred HHHHHHHHHH
Q psy9709 489 ICFQTRDILE 498 (500)
Q Consensus 489 ia~~~~~~~~ 498 (500)
+++.+...++
T Consensus 195 Va~~i~~~~~ 204 (270)
T 1hux_A 195 VASRVIGLAN 204 (270)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999876654
No 67
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=97.55 E-value=8.8e-05 Score=72.26 Aligned_cols=85 Identities=18% Similarity=0.289 Sum_probs=59.1
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
+++|||+|+|++|++++|.+ |+++...+.+++. .+++++++.+.+. +++ ..+|.+|||+
T Consensus 5 ~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~~~~---------~~~~~~~~~i~~~----~~~-------~~~i~gigi~ 63 (297)
T 4htl_A 5 KIAAFDIGGTALKMGVVLPH-GEIILTKSAEISG---------SDGDQILAEMKVF----LAE-------NTDVTGIAVS 63 (297)
T ss_dssp CEEEEEECSSEEEEEEECTT-SCEEEEEEEECST---------TCHHHHHHHHHHH----HHT-------CTTCCEEEEE
T ss_pred EEEEEEeCCCeEEEEEECCC-CCEEEEEEecCCC---------CCHHHHHHHHHHH----Hhh-------cCCeeEEEEe
Confidence 68999999999999999985 9999877666431 2345555544433 221 2468999999
Q ss_pred CCCceeEEEeCCCCcccc-cce-eeccCCCHH
Q psy9709 234 NQRETTVVWDLNTGEPLY-NAI-VWSDTRADN 263 (500)
Q Consensus 234 ~~~~~~v~~d~~~G~~l~-~~i-~w~D~r~~~ 263 (500)
.++ ++|.++|..+. |.+ .|.+.+-.+
T Consensus 64 ~pG----~vd~~~g~v~~~~~l~~w~~~~l~~ 91 (297)
T 4htl_A 64 APG----YVNPKTGLITMGGAIRRFDNFNLKE 91 (297)
T ss_dssp ESS----EECTTTCEEEECTTCGGGTTEEHHH
T ss_pred cCc----ceeCCCCEEEeCCCCCCccCCCHHH
Confidence 887 88975677765 345 377665443
No 68
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=97.52 E-value=0.0001 Score=71.92 Aligned_cols=90 Identities=12% Similarity=0.120 Sum_probs=62.5
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
|++|||+|+|++|++++|.+ +. +...+.+++ ..+.+++++.+.+.++++.++. ..+|.+|+++
T Consensus 2 ~~lgiDiGgt~i~~~l~d~~-~~-l~~~~~~~~---------~~~~~~~~~~i~~~i~~~~~~~------~~~i~gigi~ 64 (302)
T 3vov_A 2 KVVGLDLGGTKIAAGVFDGK-RL-LSKVVVPTP---------KEGGERVAEALAEAAERAEREA------GVRGEAIGLG 64 (302)
T ss_dssp CEEEEEECSSEEEEEEECSS-SB-SCCEEEECC---------SSCHHHHHHHHHHHHHHHHHHH------TCCCSSEEEE
T ss_pred EEEEEEEcCCEEEEEEEeCC-Cc-EEEEEEcCC---------CCChHHHHHHHHHHHHHHHhhc------cCCceEEEEE
Confidence 68999999999999999975 54 444444443 1234788888888888877642 3568888998
Q ss_pred CCCceeEEEeCCCCcccc-cce-eeccCCCHHH
Q psy9709 234 NQRETTVVWDLNTGEPLY-NAI-VWSDTRADNI 264 (500)
Q Consensus 234 ~~~~~~v~~d~~~G~~l~-~~i-~w~D~r~~~~ 264 (500)
.++ ++|.++|.... +.+ .|.+..-.+.
T Consensus 65 ~pG----~vd~~~g~v~~~~~~~~w~~~~l~~~ 93 (302)
T 3vov_A 65 TPG----PLDFRRGVIRFAPNIPGVQDFPIRRI 93 (302)
T ss_dssp ESS----CEETTTTEEC---CCTTCTTCCHHHH
T ss_pred ecc----cEeCCCCEEEcCCCCCCcCCCChHHH
Confidence 887 78875576653 445 5877654443
No 69
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.49 E-value=0.0002 Score=69.87 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=47.1
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. +|+++.+.+.+++ +++++++.+.+.++ ..+|.+|||+
T Consensus 4 ~~lgiDiGgt~i~~~l~d~-~G~il~~~~~~t~-----------~~~~~l~~i~~~~~------------~~~i~gigi~ 59 (302)
T 3epq_A 4 MLGGIEAGGTXFVCAVGRE-DGTIIDRIEFPTX-----------MPDETIEXVIQYFS------------QFSLQAIGIG 59 (302)
T ss_dssp CEEEEEECSSEEEEEEECT-TSCEEEEEEEECC-----------CHHHHHHHHHHHHT------------TSCCSEEEEE
T ss_pred EEEEEEECcceeEEEEEEC-CCcEEEEEEecCC-----------ChHHHHHHHHHHhc------------cCCceEEEEE
Confidence 4677999999999999998 9999988766542 35666555443322 1368999999
Q ss_pred CCcceeEEeeCCC
Q psy9709 105 NQRETTVVWDLNT 117 (500)
Q Consensus 105 ~~~~~~v~~d~~~ 117 (500)
..+ ++|.++
T Consensus 60 ~pG----~vd~~~ 68 (302)
T 3epq_A 60 SFG----PVDNDX 68 (302)
T ss_dssp ECS----SEECCT
T ss_pred ece----eecccc
Confidence 766 567643
No 70
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.45 E-value=0.0015 Score=62.37 Aligned_cols=60 Identities=15% Similarity=0.083 Sum_probs=43.0
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHH
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEK 87 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~ 87 (500)
.+++|||+||+++|++++|. ++++++....+..... + ....|.+...+.+...++.+...
T Consensus 28 ~~~~gIDiGS~s~k~vi~~~-~~~~l~~~~~~~~~l~--~-g~i~d~~~~~~~l~~~~~~~~~~ 87 (272)
T 3h1q_A 28 PYKVGVDLGTADIVLVVTDQ-EGIPVAGALKWASVVK--D-GLVVDYIGAIQIVRELKAKVERL 87 (272)
T ss_dssp CCEEEEECCSSEEEEEEECT-TCCEEEEEEEECCCCB--T-TBCTTHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEcccceEEEEEECC-CCcEEEEEeecccccC--C-CEEEcHHHHHHHHHHHHHHHHHh
Confidence 46777999999999999997 8999988766554222 2 34556677776666666665544
No 71
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=97.41 E-value=0.00026 Score=69.10 Aligned_cols=84 Identities=14% Similarity=0.090 Sum_probs=57.0
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 232 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~v 232 (500)
.+++|||+|+|++|++++|.+ |+++...+.+++ +++++++.+.+.++ ..+|.+|||
T Consensus 3 ~~~lgiDiGgt~i~~~l~d~~-G~il~~~~~~t~-----------~~~~~l~~i~~~~~------------~~~i~gigi 58 (302)
T 3epq_A 3 AMLGGIEAGGTXFVCAVGRED-GTIIDRIEFPTX-----------MPDETIEXVIQYFS------------QFSLQAIGI 58 (302)
T ss_dssp CCEEEEEECSSEEEEEEECTT-SCEEEEEEEECC-----------CHHHHHHHHHHHHT------------TSCCSEEEE
T ss_pred cEEEEEEECcceeEEEEEECC-CcEEEEEEecCC-----------ChHHHHHHHHHHhc------------cCCceEEEE
Confidence 578999999999999999985 999987665542 35555554443322 136899999
Q ss_pred cCCCceeEEEeCCC-----Ccccc-cceeeccCCCHHH
Q psy9709 233 TNQRETTVVWDLNT-----GEPLY-NAIVWSDTRADNI 264 (500)
Q Consensus 233 s~~~~~~v~~d~~~-----G~~l~-~~i~w~D~r~~~~ 264 (500)
+.++ ++|.++ |.... |...|.+..-.+.
T Consensus 59 ~~pG----~vd~~~~~~~~G~i~~~~~~~w~~~~l~~~ 92 (302)
T 3epq_A 59 GSFG----PVDNDXTSQTYGTITATPXAGWRHYPFLQT 92 (302)
T ss_dssp EECS----SEECCTTSTTTTEECCCSSTTTBTCCHHHH
T ss_pred Eece----eeccccccccccEEecCCCCCccCCChHHH
Confidence 9887 788743 44432 4455877654443
No 72
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=97.37 E-value=0.00055 Score=67.43 Aligned_cols=82 Identities=11% Similarity=0.103 Sum_probs=59.8
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 232 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~v 232 (500)
.+++|||+|.|++|++++|.+ |+++...+.+++. .+++++.+.+.+.++++..+. ..+.+|++
T Consensus 24 ~~~lgiDiGgt~i~~~l~d~~-g~il~~~~~~~~~---------~~~~~~~~~i~~~i~~~~~~~-------~~i~~igi 86 (327)
T 2ap1_A 24 AMYYGFDIGGTKIALGVFDST-RRLQWEKRVPTPH---------TSYSAFLDAVCELVEEADQRF-------GVKGSVGI 86 (327)
T ss_dssp CEEEEEEECSSEEEEEEEETT-CCEEEEEEEECCC---------SCHHHHHHHHHHHHHHHHHHH-------TSCCEEEE
T ss_pred ceEEEEEECCCEEEEEEEeCC-CCEEEEEEecCCC---------CCHHHHHHHHHHHHHHHHHhc-------CCccEEEE
Confidence 479999999999999999985 9999877665431 256778888888888776542 24777888
Q ss_pred cCCCceeEEEeCCCCccccccee
Q psy9709 233 TNQRETTVVWDLNTGEPLYNAIV 255 (500)
Q Consensus 233 s~~~~~~v~~d~~~G~~l~~~i~ 255 (500)
+.++ ++|.++|....+.+.
T Consensus 87 ~~pG----~vd~~~g~v~~~~~~ 105 (327)
T 2ap1_A 87 GIPG----MPETEDGTLYAANVP 105 (327)
T ss_dssp EESS----BSCCTTSCCBCTTCT
T ss_pred Eeee----eEECCCCEEEccCCC
Confidence 8777 778744665543333
No 73
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.33 E-value=0.00014 Score=72.93 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=65.0
Q ss_pred ccCCEEEEEeccCCCceEEEEeCCCCeEEEEe-eeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 150 TQVPLIGVIDEGTRTVRFAIISALTQEEVVSH-SMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 228 (500)
Q Consensus 150 ~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~-~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~ 228 (500)
....+++|||+|.|++|++++| . |+++... +.+++. .+++++.+.+.+.+. .++++ .. .+|.
T Consensus 6 ~d~~~~lgiDIGgt~i~~~l~d-~-G~il~~~~~~~~~~---------~~~~~~l~~i~~~~~-~i~~~----~~-~~i~ 68 (366)
T 3mcp_A 6 NDNRIVMTLDAGGTNFVFSAIQ-G-GKEIADPVVLPACA---------DCLDKCLGNLVEGFK-AIQAG----LP-EAPV 68 (366)
T ss_dssp TCCCEEEEEECSSSEEEEEEEE-T-TEECSCCEEEECCT---------TCHHHHHHHHHHHHH-HHHTT----CS-SCCC
T ss_pred CCCCEEEEEEECcceEEEEEEE-C-CEEEEEEEEEECCC---------CCHHHHHHHHHHHHH-HHHHH----hh-cCCe
Confidence 3467899999999999999999 6 9988655 454431 167888877776322 22211 11 5789
Q ss_pred EEEEcCCCceeEEEeCCCCcccc-cce-eec-cCCCHHH
Q psy9709 229 TLGITNQRETTVVWDLNTGEPLY-NAI-VWS-DTRADNI 264 (500)
Q Consensus 229 ~I~vs~~~~~~v~~d~~~G~~l~-~~i-~w~-D~r~~~~ 264 (500)
+|||+.++ ++|.++|.... |.+ .|. +..-.+.
T Consensus 69 gIGIavPG----~Vd~~~G~i~~~~nlp~w~~~~~l~~~ 103 (366)
T 3mcp_A 69 AISFAFPG----PADYQAGIIGDLPNFPSFRGGVALGPF 103 (366)
T ss_dssp EEEEECCS----SEETTTTEECCCTTCGGGTTCBCHHHH
T ss_pred EEEEEecc----eEeCCCCEEEeCCCcccccCCCCHHHH
Confidence 99999888 88975677664 556 687 6654443
No 74
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.31 E-value=0.00051 Score=65.68 Aligned_cols=86 Identities=12% Similarity=0.089 Sum_probs=54.8
Q ss_pred EEEEEecCCCcceEEEEeCCC-CcEEEEE-EeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALT-QEEVVSH-SMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 102 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~-g~~l~~~-~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Ig 102 (500)
+++|||+|+|++|++++|. + |+++... +.+++ ...+++++++.+.+.++++.++ ... ...+.+||
T Consensus 13 ~~lgidiggt~i~~~l~dl-~~g~i~~~~~~~~~~--------~~~~~~~~~~~i~~~i~~~~~~---~~~-~~~~~~ig 79 (267)
T 1woq_A 13 PLIGIDIGGTGIKGGIVDL-KKGKLLGERFRVPTP--------QPATPESVAEAVALVVAELSAR---PEA-PAAGSPVG 79 (267)
T ss_dssp CEEEEEECSSEEEEEEEET-TTTEEEEEEEEEECC--------SSCCHHHHHHHHHHHHHHHHTS---TTC-CCTTCCEE
T ss_pred EEEEEEECCCEEEEEEEEC-CCCeEEEEEEecCCC--------ccCCHHHHHHHHHHHHHHHHHh---ccc-cCccceEE
Confidence 5677999999999999997 6 6777432 33332 1246888999999888887643 221 12344566
Q ss_pred EcCCcceeEEeeCCCCCccc-ccc--ccCC
Q psy9709 103 ITNQRETTVVWDLNTGEPLY-NAI--DKMP 129 (500)
Q Consensus 103 is~~~~~~v~~d~~~g~pl~-p~i--~w~d 129 (500)
|+..+ ++|. |..+. |.+ .|.+
T Consensus 80 i~~pG----~v~~--g~v~~~~~l~~~w~~ 103 (267)
T 1woq_A 80 VTFPG----IIQH--GVVHSAANVDKSWLN 103 (267)
T ss_dssp EEESS----CEET--TEECCCTTSCGGGTT
T ss_pred EEccc----eEcC--CEEEeCCCCCCCCCC
Confidence 66544 3463 66553 444 3764
No 75
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.29 E-value=0.0003 Score=67.98 Aligned_cols=82 Identities=13% Similarity=0.112 Sum_probs=55.6
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|+|++|++++|. +|+++.+.+.+++. ..+++++.+.+.+.++++.++ +.+|||+
T Consensus 2 ~~lgidiggt~~~~~l~d~-~g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~~----------~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGA-DGQIRDRRELPTPA--------SQTPEALRDALSALVSPLQAH----------AQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECT-TCCEEEEEEEECCS--------SCCHHHHHHHHHHHHTTTGGG----------CSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECC-CCCEEEEEEecCCC--------CCCHHHHHHHHHHHHHHHHhh----------CCEEEEE
Confidence 3567999999999999998 89999887766541 135788888887777665432 2356665
Q ss_pred CCcceeEEeeCCCCCccc-ccc-ccCC
Q psy9709 105 NQRETTVVWDLNTGEPLY-NAI-DKMP 129 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~-p~i-~w~d 129 (500)
..+ ++|.++|..+. |.+ -|.+
T Consensus 63 ~pG----~vd~~~g~v~~~~~~~~w~~ 85 (289)
T 2aa4_A 63 STG----IIRDGSLLALNPHNLGGLLH 85 (289)
T ss_dssp ESS----EEETTEEECSSGGGGGGGTT
T ss_pred ecc----ceeCCCCEEEeCCCCCcccC
Confidence 544 66774455443 344 3753
No 76
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=97.23 E-value=0.00039 Score=69.63 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=58.6
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEE-EeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSH-SMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 102 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~-~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Ig 102 (500)
.+++|||+|+|++|++++| +|+++.+. +.+++ .. +++++.+.+.+.++ ++++ . . ..+|.+||
T Consensus 9 ~~~lgiDIGgt~i~~~l~d--~G~il~~~~~~~~~--------~~-~~~~~l~~i~~~~~-~i~~---~-~-~~~i~gIG 71 (366)
T 3mcp_A 9 RIVMTLDAGGTNFVFSAIQ--GGKEIADPVVLPAC--------AD-CLDKCLGNLVEGFK-AIQA---G-L-PEAPVAIS 71 (366)
T ss_dssp CEEEEEECSSSEEEEEEEE--TTEECSCCEEEECC--------TT-CHHHHHHHHHHHHH-HHHT---T-C-SSCCCEEE
T ss_pred CEEEEEEECcceEEEEEEE--CCEEEEEEEEEECC--------CC-CHHHHHHHHHHHHH-HHHH---H-h-hcCCeEEE
Confidence 5788899999999999999 59999876 55553 12 78888888877332 2222 1 1 16799999
Q ss_pred EcCCcceeEEeeCCCCCccc-ccc-ccC
Q psy9709 103 ITNQRETTVVWDLNTGEPLY-NAI-DKM 128 (500)
Q Consensus 103 is~~~~~~v~~d~~~g~pl~-p~i-~w~ 128 (500)
|+..+ ++|.++|.... |.+ -|.
T Consensus 72 IavPG----~Vd~~~G~i~~~~nlp~w~ 95 (366)
T 3mcp_A 72 FAFPG----PADYQAGIIGDLPNFPSFR 95 (366)
T ss_dssp EECCS----SEETTTTEECCCTTCGGGT
T ss_pred EEecc----eEeCCCCEEEeCCCccccc
Confidence 99877 67865576653 344 465
No 77
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=97.22 E-value=0.00041 Score=67.44 Aligned_cols=97 Identities=8% Similarity=0.044 Sum_probs=63.3
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
+++|||+|+|++|++++|.+ |+++...+.+++ .+.+++++++++.+.+++++++++ .+.+||++
T Consensus 3 ~~lgiDiGgt~~~~~l~d~~-g~i~~~~~~~~~------~~~~~~~~~~~~~i~~~i~~~~~~---------~~~~igi~ 66 (299)
T 2e2o_A 3 IIVGVDAGGTKTKAVAYDCE-GNFIGEGSSGPG------NYHNVGLTRAIENIKEAVKIAAKG---------EADVVGMG 66 (299)
T ss_dssp CEEEEEECSSCEEEEEECTT-SCEEEEEEESCC------CHHHHCHHHHHHHHHHHHHHHHTS---------CCSEEEEE
T ss_pred EEEEEEeCCCcEEEEEEcCC-CCEEEEEeCCCC------CcccCCHHHHHHHHHHHHHHHHhc---------CCCEEEEE
Confidence 78999999999999999985 999987665543 122467889999999888887642 14566665
Q ss_pred CCCce----eEEEeCCCCccc-ccceeeccCCCHHHHHH
Q psy9709 234 NQRET----TVVWDLNTGEPL-YNAIVWSDTRADNIVDQ 267 (500)
Q Consensus 234 ~~~~~----~v~~d~~~G~~l-~~~i~w~D~r~~~~~~~ 267 (500)
.++.. .+.+.+.-.+ + .|++.++|.++....+.
T Consensus 67 ~~G~~~~~~~~~l~~~l~~-~~~pv~v~ND~~aaa~~e~ 104 (299)
T 2e2o_A 67 VAGLDSKFDWENFTPLASL-IAPKVIIQHDGVIALFAET 104 (299)
T ss_dssp ETTCCSHHHHHHHHHHHTT-SSSEEEEEEHHHHHHHHHH
T ss_pred cCCCCchhHHHHHHHHHHh-CCCCEEEeCcHHHHHhhcc
Confidence 55410 0111110001 1 36677888777665554
No 78
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=97.21 E-value=0.00094 Score=68.69 Aligned_cols=74 Identities=8% Similarity=-0.031 Sum_probs=50.4
Q ss_pred EEEEecCCCcceEEEEeCCCCcE---EEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCC-CCC-eeE
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEE---VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS-RDD-IVT 100 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~---l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~-~~~-i~~ 100 (500)
++|||+|+|++|++++|. +|++ +...+.+++ .+ -...+++++++.+.+++++++++ .+.. .+. ..|
T Consensus 63 ~laiDlGGTnirv~lV~~-~G~~~~~~~~~~~~ip----~~-~~~~~~~~lfd~Ia~~i~~~~~~---~~~~~~~~~~lG 133 (457)
T 2yhx_A 63 FLAIVMGGGDLEVILISL-AGRQESSIXASRSLAA----AM-STTAIPSDLWGNXAXSNAAFSSX---EFSSXAGSVPLG 133 (457)
T ss_dssp EEEEEECSSEEEEEEEEE-ETTEEEEEEEEEECCT----TT-TSCSCTHHHHHHHHHHHHHHHHH---HTSSCSSCEEEE
T ss_pred EEEEEeCCCeEEEEEEEe-CCCeeEEEeeEEEEcC----Cc-cCCCCHHHHHHHHHHHHHHHHhh---ccccccccccee
Confidence 466999999999999998 8988 443333332 11 01236799999999999999876 2221 122 567
Q ss_pred EEEcCCcc
Q psy9709 101 LGITNQRE 108 (500)
Q Consensus 101 Igis~~~~ 108 (500)
||++....
T Consensus 134 i~fs~P~~ 141 (457)
T 2yhx_A 134 FTFXEAGA 141 (457)
T ss_dssp EECCSCCC
T ss_pred eEEEEEEE
Confidence 77777553
No 79
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=97.17 E-value=0.0003 Score=68.04 Aligned_cols=87 Identities=13% Similarity=0.045 Sum_probs=59.3
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
+++|||+|.|++|++++|.+ |+++...+.+++. ..+++++.+.+.+.++++.+ ++.+|+++
T Consensus 2 ~~lgidiggt~~~~~l~d~~-g~il~~~~~~~~~--------~~~~~~~~~~i~~~i~~~~~----------~~~~igi~ 62 (289)
T 2aa4_A 2 TTLAIDIGGTKLAAALIGAD-GQIRDRRELPTPA--------SQTPEALRDALSALVSPLQA----------HAQRVAIA 62 (289)
T ss_dssp CEEEEEECSSEEEEEEECTT-CCEEEEEEEECCS--------SCCHHHHHHHHHHHHTTTGG----------GCSEEEEE
T ss_pred eEEEEEeCCCEEEEEEECCC-CCEEEEEEecCCC--------CCCHHHHHHHHHHHHHHHHh----------hCCEEEEE
Confidence 57999999999999999985 9999877666541 12477777777776665542 23467777
Q ss_pred CCCceeEEEeCCCCcccc-cce-eeccCCCHH
Q psy9709 234 NQRETTVVWDLNTGEPLY-NAI-VWSDTRADN 263 (500)
Q Consensus 234 ~~~~~~v~~d~~~G~~l~-~~i-~w~D~r~~~ 263 (500)
.++ ++|.++|..+. |.+ .|.+..-.+
T Consensus 63 ~pG----~vd~~~g~v~~~~~~~~w~~~~l~~ 90 (289)
T 2aa4_A 63 STG----IIRDGSLLALNPHNLGGLLHFPLVK 90 (289)
T ss_dssp ESS----EEETTEEECSSGGGGGGGTTCCHHH
T ss_pred ecc----ceeCCCCEEEeCCCCCcccCCChHH
Confidence 676 78874455443 444 377665433
No 80
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=97.16 E-value=0.00038 Score=64.77 Aligned_cols=123 Identities=13% Similarity=-0.013 Sum_probs=67.2
Q ss_pred cCcEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 22 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 101 (500)
Q Consensus 22 ~~~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~I 101 (500)
++.++++||+|+|++| ++|. +|++ ..+.+++ ...+++++.+.+.+ ++++ .++.+|
T Consensus 4 ~~~~~lgiDIGGT~i~--~~d~-~g~~--~~~~~t~--------~~~~~~~~~~~i~~----~i~~--------~~i~gi 58 (226)
T 3lm2_A 4 EDQTVLAIDIGGSHVK--IGLS-TDGE--ERKVESG--------KTMTGPEMVAAVTA----MAKD--------MTYDVI 58 (226)
T ss_dssp GGCCEEEEEECSSEEE--EEET-TTCC--EEEEECC--------TTCCHHHHHHHHHH----HTTT--------CCCSEE
T ss_pred cCCEEEEEEECCCEEE--EEEC-CCCE--EEEEECC--------CCCCHHHHHHHHHH----HHHh--------CCCCEE
Confidence 3445677999999999 5787 8876 2333332 23466666655544 3322 268889
Q ss_pred EEcCCcceeEEeeCCCCCcccc-cc--ccCCccccCCCCCCCCCCC-Cc-ccc----ccCCEEEEEeccCCCceEEEEeC
Q psy9709 102 GITNQRETTVVWDLNTGEPLYN-AI--DKMPSLVYNTPPEPSSNTN-NN-SIQ----TQVPLIGVIDEGTRTVRFAIISA 172 (500)
Q Consensus 102 gis~~~~~~v~~d~~~g~pl~p-~i--~w~d~~~~~~t~~~~~~~~-n~-~~~----~~~~~~lgIDiGTts~k~~l~d~ 172 (500)
||+..+ ++|. ++..+.+ -+ .|.+-...++... +-.. |. ... ....-++.+-+|| .+=++++-
T Consensus 59 gi~~pG----~Vd~-~~~~~~~~nl~~~w~~~~l~~~~~~--pv~v~NDanaaalge~~~~~~~~l~~Gt-GiG~gii~- 129 (226)
T 3lm2_A 59 AMGYPG----PVVH-NKPLREPVNLGEGWVGYDYEGAFGR--PVRIVNDALMQAIGSYNGGRMLFLGLGT-GLGAAMIV- 129 (226)
T ss_dssp EEEESS----CEET-TEECSCCTTSCSCCTTCCHHHHHTS--CEEEEEHHHHHHHHHCCSSEEEEEEESS-SEEEEEEE-
T ss_pred EEEEEe----EEEC-CeEEEECCcCCccccCCchHHhcCC--eEEEEEHHHHHHHHHhhcCcEEEEEeCC-ceEEEEEE-
Confidence 988766 5687 4655543 34 4865433222110 0111 22 100 1112355677775 46666665
Q ss_pred CCCeEEE
Q psy9709 173 LTQEEVV 179 (500)
Q Consensus 173 ~~G~vi~ 179 (500)
+ |+++.
T Consensus 130 ~-G~l~~ 135 (226)
T 3lm2_A 130 E-NVAQP 135 (226)
T ss_dssp T-TEEEE
T ss_pred C-CEEee
Confidence 3 88764
No 81
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=97.12 E-value=0.00084 Score=64.94 Aligned_cols=69 Identities=16% Similarity=0.252 Sum_probs=49.8
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 105 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~ 105 (500)
++|||+|+|++|++++|. +|+++.+.+.+++ .+++++.+.+.+.+++ .++.+|||+.
T Consensus 6 ~lgidiggt~i~~~l~d~-~g~il~~~~~~~~----------~~~~~~~~~i~~~i~~------------~~i~gigi~~ 62 (292)
T 2gup_A 6 IATIDIGGTGIKFASLTP-DGKILDKTSISTP----------ENLEDLLAWLDQRLSE------------QDYSGIAMSV 62 (292)
T ss_dssp EEEEEEETTEEEEEEECT-TCCEEEEEEECCC----------SSHHHHHHHHHHHHTT------------SCCSEEEEEE
T ss_pred EEEEEECCCEEEEEEECC-CCCEEEEEEEeCC----------CCHHHHHHHHHHHHHh------------CCCcEEEEEe
Confidence 567999999999999998 8999987665442 2566666555444332 4688888887
Q ss_pred CcceeEEeeCCCCCcc
Q psy9709 106 QRETTVVWDLNTGEPL 121 (500)
Q Consensus 106 ~~~~~v~~d~~~g~pl 121 (500)
.+ ++|.++|...
T Consensus 63 pG----~vd~~~g~v~ 74 (292)
T 2gup_A 63 PG----AVNQETGVID 74 (292)
T ss_dssp SS----EECTTTCBEE
T ss_pred cC----cccCCCCEEE
Confidence 76 6787457655
No 82
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=97.09 E-value=0.0008 Score=64.27 Aligned_cols=94 Identities=15% Similarity=0.168 Sum_probs=59.2
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEE-eeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVS-HSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~-~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
.+++|||+|.|++|++++|...|+++.. .+.+++ . ..+++++.+.+.+.++++.++. + ....+.+||
T Consensus 12 ~~~lgidiggt~i~~~l~dl~~g~i~~~~~~~~~~----~----~~~~~~~~~~i~~~i~~~~~~~---~-~~~~~~~ig 79 (267)
T 1woq_A 12 APLIGIDIGGTGIKGGIVDLKKGKLLGERFRVPTP----Q----PATPESVAEAVALVVAELSARP---E-APAAGSPVG 79 (267)
T ss_dssp CCEEEEEECSSEEEEEEEETTTTEEEEEEEEEECC----S----SCCHHHHHHHHHHHHHHHHTST---T-CCCTTCCEE
T ss_pred CEEEEEEECCCEEEEEEEECCCCeEEEEEEecCCC----c----cCCHHHHHHHHHHHHHHHHHhc---c-ccCccceEE
Confidence 3689999999999999999743677743 233332 0 1357788888888877765421 1 112344677
Q ss_pred EcCCCceeEEEeCCCCcccc-cce--eeccCCCHHH
Q psy9709 232 ITNQRETTVVWDLNTGEPLY-NAI--VWSDTRADNI 264 (500)
Q Consensus 232 vs~~~~~~v~~d~~~G~~l~-~~i--~w~D~r~~~~ 264 (500)
|+.++ ++|. |..+. |.+ .|.+..-.+.
T Consensus 80 i~~pG----~v~~--g~v~~~~~l~~~w~~~~l~~~ 109 (267)
T 1woq_A 80 VTFPG----IIQH--GVVHSAANVDKSWLNTDIDAL 109 (267)
T ss_dssp EEESS----CEET--TEECCCTTSCGGGTTCBHHHH
T ss_pred EEccc----eEcC--CEEEeCCCCCCCCCCCCHHHH
Confidence 77666 5573 77654 445 3876654443
No 83
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.02 E-value=0.0012 Score=63.39 Aligned_cols=116 Identities=14% Similarity=0.136 Sum_probs=67.5
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
+++|||+|||++|++++|. +++++.....++ |.. ++ . ..+.+++++++ ++....++.+++++
T Consensus 2 ~~lGID~GsT~tk~av~d~-~~~il~~~~~~~-------g~~---~e-~---a~~vl~~~~~~---a~~~~~~~~~~a~t 63 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKN-GEDIVASETISS-------GTG---TT-G---PSRVLEKLYGK---TGLAREDIKKVVVT 63 (276)
T ss_dssp EEEEEEECSSCEEEEEEET-TTEEEEEEEESC-------CTT---SS-H---HHHHHHHHHHH---HCCCGGGEEEEEEE
T ss_pred eEEEEEcCccEEEEEEEEC-CCeEEEEEEecC-------CCC---HH-H---HHHHHHHHHHH---CCCcchhccccccC
Confidence 5777999999999999997 888887654332 211 22 1 23356677666 67778889998887
Q ss_pred CCcceeEEeeCCCCCccccccccCCccccCCCCCCCCCCCCccccccCCEEEEEeccCCCceEEEEeCCCCeEE
Q psy9709 105 NQRETTVVWDLNTGEPLYNAIDKMPSLVYNTPPEPSSNTNNNSIQTQVPLIGVIDEGTRTVRFAIISALTQEEV 178 (500)
Q Consensus 105 ~~~~~~v~~d~~~g~pl~p~i~w~d~~~~~~t~~~~~~~~n~~~~~~~~~~lgIDiGTts~k~~l~d~~~G~vi 178 (500)
+...-. -..|+..+- |-++.- .-.... .......+|+|++..++.+++.+ |.+.
T Consensus 64 ~~~~~a------~~~~~~~Vn--------e~~aha----~a~~~~-~~~~~~vl~lgG~~~~~~~~~~~-g~~~ 117 (276)
T 4ehu_A 64 GYGRMN------YSDADKQIS--------ELSCHA----RGVNFI-IPETRTIIDIGGQDAKVLKLDNN-GRLL 117 (276)
T ss_dssp STTGGG------CCSCSEECC--------HHHHHH----HHHHHH-STTCCEEEEECSSCEEEEEECTT-SCEE
T ss_pred chHHHH------hhCCCcccc--------hHHHHH----HHHHHh-CCCCCeEEEEcCCCceEEEEEec-CceE
Confidence 654321 122222110 000000 000000 01112458999999999999864 7654
No 84
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=97.01 E-value=0.00073 Score=65.45 Aligned_cols=68 Identities=18% Similarity=0.102 Sum_probs=48.7
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 105 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~ 105 (500)
++|||+|+|++|++++| +|+++.+.+.+... ....+++++++.+.+.++++.. .+..+|.+|||+.
T Consensus 2 ~lgiDiGGT~~~~~l~d--~g~il~~~~~~~~~------~~~~~~~~~~~~i~~~i~~~~~------~~~~~i~~igig~ 67 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK--EGKSLGRFQTSGIN------PFQQDRNEIDTALRSEVLPAIG------QKASSIRAVYFYG 67 (291)
T ss_dssp EEEEEECSSEEEEEEEE--TTEEEEEEEEECCC------TTTSCHHHHHHHHTTTTHHHHT------TSTTTCCEEEEEE
T ss_pred EEEEEeCccceEEEEEe--CCeEEEEEECCCCC------cccCCHHHHHHHHHHHHHHHhC------CCcccccEEEEEC
Confidence 46799999999999999 59999877653310 0124688888888888876531 2345687888776
Q ss_pred Cc
Q psy9709 106 QR 107 (500)
Q Consensus 106 ~~ 107 (500)
-+
T Consensus 68 pG 69 (291)
T 1zbs_A 68 AG 69 (291)
T ss_dssp TT
T ss_pred CC
Confidence 55
No 85
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=96.92 E-value=0.0011 Score=64.08 Aligned_cols=79 Identities=15% Similarity=0.183 Sum_probs=54.7
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
+++|||+|.|++|++++|.+ |+++...+.+++ .+++++.+.+.+.+++ .++.+||++
T Consensus 5 ~~lgidiggt~i~~~l~d~~-g~il~~~~~~~~----------~~~~~~~~~i~~~i~~------------~~i~gigi~ 61 (292)
T 2gup_A 5 TIATIDIGGTGIKFASLTPD-GKILDKTSISTP----------ENLEDLLAWLDQRLSE------------QDYSGIAMS 61 (292)
T ss_dssp CEEEEEEETTEEEEEEECTT-CCEEEEEEECCC----------SSHHHHHHHHHHHHTT------------SCCSEEEEE
T ss_pred EEEEEEECCCEEEEEEECCC-CCEEEEEEEeCC----------CCHHHHHHHHHHHHHh------------CCCcEEEEE
Confidence 48999999999999999985 999877655432 2466665555444332 468889998
Q ss_pred CCCceeEEEeCCCCcccc-ccee-eccC
Q psy9709 234 NQRETTVVWDLNTGEPLY-NAIV-WSDT 259 (500)
Q Consensus 234 ~~~~~~v~~d~~~G~~l~-~~i~-w~D~ 259 (500)
.++ ++|.++|.... |.+. |.+.
T Consensus 62 ~pG----~vd~~~g~v~~~~~~~~~~~~ 85 (292)
T 2gup_A 62 VPG----AVNQETGVIDGFSAVPYIHGF 85 (292)
T ss_dssp ESS----EECTTTCBEESCCSSGGGSSS
T ss_pred ecC----cccCCCCEEEecCCCCcccCC
Confidence 887 88874576553 4443 5444
No 86
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=96.84 E-value=0.0033 Score=61.50 Aligned_cols=147 Identities=18% Similarity=0.190 Sum_probs=81.0
Q ss_pred EEEEEecCCCcceEEEEeCCCCc--EEEEEEeeeeeecCCCCcc---ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQE--EVVSHSMDISTISPQEGWA---EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 99 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~--~l~~~~~~~~~~~~~~g~~---e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 99 (500)
.+++||+||.++|..|++..++. ++...+.... -..|-. ..+++ -.+..++++++..+.++..++ ++|.
T Consensus 5 ~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vr---Lg~g~~~~g~ls~e-ai~r~~~~L~~f~~~~~~~~v--~~v~ 78 (315)
T 3mdq_A 5 RIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVG---LGKGGITKGFITEE-AMDRALDTLKKFRVILDEHAV--VHVI 78 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECC---SSTTTGGGTCCCHH-HHHHHHHHHHHHHHHHHHTTC--CEEE
T ss_pred eEEEEEecCCcEEEEEEEEcCCceEEeeeceeeee---ccccccccCCcCHH-HHHHHHHHHHHHHHHHHHcCC--CEEE
Confidence 46779999999999999973343 3333333332 122211 22333 445556666666555444554 6799
Q ss_pred EEEEcCCcceeEEeeCCCCCccccccc--------cCCccccCCCCCCCCCCCCccccccCCEEEEEeccCCCceEEEEe
Q psy9709 100 TLGITNQRETTVVWDLNTGEPLYNAID--------KMPSLVYNTPPEPSSNTNNNSIQTQVPLIGVIDEGTRTVRFAIIS 171 (500)
Q Consensus 100 ~Igis~~~~~~v~~d~~~g~pl~p~i~--------w~d~~~~~~t~~~~~~~~n~~~~~~~~~~lgIDiGTts~k~~l~d 171 (500)
+++-++.| |+.|++-+-.-+- +.+..-..+..|. ... + .......-.+.+|||+.|+-.++++
T Consensus 79 ~vATsA~R------~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~-gv~-~-~~~~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 79 ATGTSAVR------SGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFR-GVQ-Q-AVPMEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp EEECHHHH------HCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHH-HHH-H-HSCCTTCCEEEEEECSSCEEEEEEC
T ss_pred EEeeHHHH------cCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHH-HHH-h-cCCCCCCCEEEEEeCCCceEEEEEE
Confidence 99999888 4434443322221 1111100000111 000 0 0111112367799999999999998
Q ss_pred CCCCeEEEEeeeecccc
Q psy9709 172 ALTQEEVVSHSMDISTI 188 (500)
Q Consensus 172 ~~~G~vi~~~~~~~~~~ 188 (500)
++++....+.++..+
T Consensus 150 --~~~~~~~~Sl~lG~v 164 (315)
T 3mdq_A 150 --KNEILWKQSFEIGGQ 164 (315)
T ss_dssp --SSCEEEEEEESCCHH
T ss_pred --CCeEeeeEEEechhh
Confidence 388888778877644
No 87
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=96.83 E-value=0.0042 Score=63.85 Aligned_cols=75 Identities=16% Similarity=0.199 Sum_probs=47.7
Q ss_pred EEEEEecCCCcceEEEEeCCCC-cE-EEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQ-EE-VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 102 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g-~~-l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Ig 102 (500)
.++|||+|+||+|+++++. +| +- +......+.. |.+ -...+.+++++.+.+++++.+++ .+...+. ..||
T Consensus 69 ~~lalDlGGTn~Rv~~V~l-~G~~~~~~i~~~~~~i--p~~-~~~~~~~~lfd~Ia~~i~~~l~~---~~~~~~~-~~lG 140 (451)
T 1bdg_A 69 NFLALDLGGTNYRVLSVTL-EGKGKSPRIQERTYCI--PAE-KMSGSGTELFKYIAETLADFLEN---NGMKDKK-FDLG 140 (451)
T ss_dssp EEEEEEESSSSEEEEEEEE-CC-CCCCEEEEEEECC--CTT-TTTSBHHHHHHHHHHHHHHHHHH---TTCCSSC-EEEE
T ss_pred eEEEEEeCCCeEEEEEEec-CCCCcceEEEEEEEec--CCc-ccCCCHHHHHHHHHHHHHHHHHh---cCCCccc-cceE
Confidence 3566999999999999998 78 51 1111122221 111 12346799999999999999987 5554333 4555
Q ss_pred EcCCc
Q psy9709 103 ITNQR 107 (500)
Q Consensus 103 is~~~ 107 (500)
++.-.
T Consensus 141 ~tfsf 145 (451)
T 1bdg_A 141 FTFSF 145 (451)
T ss_dssp EEECS
T ss_pred EEEee
Confidence 55433
No 88
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=96.83 E-value=0.0018 Score=61.73 Aligned_cols=65 Identities=14% Similarity=0.158 Sum_probs=47.5
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 105 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~ 105 (500)
+++||+|.|++|.++||. ++++...+.+++ . ...+++. ..++++++. .+++.++|.+|+||+
T Consensus 4 lL~IDIGNT~iK~gl~d~--~~l~~~~r~~T~-~--------~t~de~~----~~l~~ll~~---~~~~~~~I~~iiISS 65 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVFDG--DEIKLRFRHTSK-V--------STSDELG----IFLKSVLRE---NNCSPETIRKIAICS 65 (266)
T ss_dssp EEEEEECSSEEEEEEEET--TEEEEEEEEECS-C--------CCHHHHH----HHHHHHHHT---TTCCGGGCCEEEEEE
T ss_pred EEEEEECCCeEEEEEEEC--CEEEEEEEecCC-C--------CCHHHHH----HHHHHHHHH---cCCChhhceEEEEec
Confidence 456999999999999995 688888877764 2 2455554 344555554 666677899999998
Q ss_pred Ccc
Q psy9709 106 QRE 108 (500)
Q Consensus 106 ~~~ 108 (500)
...
T Consensus 66 Vvp 68 (266)
T 3djc_A 66 VVP 68 (266)
T ss_dssp SCH
T ss_pred chH
Confidence 654
No 89
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.69 E-value=0.0016 Score=64.37 Aligned_cols=78 Identities=12% Similarity=-0.041 Sum_probs=48.2
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
.+++|||+|+|++|++++|..+|+++.+.+.++.. .+ .+.+.+++++++ .+ .+|.+|||
T Consensus 14 ~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~~~-----------~~----~~~~~i~~~~~~---~~---~~i~gigi 72 (332)
T 1sz2_A 14 KYALVGDVGGTNARLALCDIASGEISQAKTYSGLD-----------YP----SLEAVIRVYLEE---HK---VEVKDGCI 72 (332)
T ss_dssp CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----------CS----CHHHHHHHHHHH---SC---CCCCEEEE
T ss_pred CEEEEEEechhheEEEEEECCCCcEEEEEEecCCC-----------cC----CHHHHHHHHHHh---cC---CCccEEEE
Confidence 56778999999999999993169888755443320 11 233445555554 32 36888888
Q ss_pred cCCcceeEEeeCCCCCccccccccC
Q psy9709 104 TNQRETTVVWDLNTGEPLYNAIDKM 128 (500)
Q Consensus 104 s~~~~~~v~~d~~~g~pl~p~i~w~ 128 (500)
+..+ ++|. |....|.+.|.
T Consensus 73 ~~pG----~vd~--~~~~~~nl~w~ 91 (332)
T 1sz2_A 73 AIAC----PITG--DWVAMTNHTWA 91 (332)
T ss_dssp EESS----CCCS--SEECCSSSCCC
T ss_pred EEeC----ceeC--CEEeeeCCCCc
Confidence 8666 4564 43333444564
No 90
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=96.67 E-value=0.0034 Score=70.31 Aligned_cols=73 Identities=14% Similarity=0.160 Sum_probs=50.7
Q ss_pred EEEEecCCCcceEEEEeCCCCc----E-EEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCC-ee
Q psy9709 26 IGVIDEGTRTVRFAIISALTQE----E-VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDD-IV 99 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~----~-l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~-i~ 99 (500)
++|||+|+|++|++++|. +|+ + +...+.+++.. ..+.+.+++++.+.+++++++++ .++..+. ..
T Consensus 80 ~laiDlGGTnirv~lv~~-~G~~~~~i~~~~~~~~ip~~-----~~~~~~~~lf~~Ia~~i~~~l~~---~~~~~~~~~l 150 (917)
T 1cza_N 80 FIALDLGGSSFRILRVQV-NHEKNQNVHMESEVYDTPEN-----IVHGSGSQLFDHVAECLGDFMEK---RKIKDKKLPV 150 (917)
T ss_dssp EEEEEESSSSEEEEEEEE-EEETTEEEEEEEEEECCCHH-----HHSSBHHHHHHHHHHHHHHHHHH---HTCTTSCCCE
T ss_pred EEEEEeCCCeEEEEEEEe-cCCCcceEEEEEEEEECCcc-----cccCCHHHHHHHHHHHHHHHHHh---cCCCCCcccE
Confidence 466999999999999998 776 4 44444444311 01236789999999999999876 3332222 56
Q ss_pred EEEEcCCc
Q psy9709 100 TLGITNQR 107 (500)
Q Consensus 100 ~Igis~~~ 107 (500)
|||+++..
T Consensus 151 Gi~fs~P~ 158 (917)
T 1cza_N 151 GFTFSFPC 158 (917)
T ss_dssp EEEECSCE
T ss_pred EEEEcccc
Confidence 88888754
No 91
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=96.64 E-value=0.0012 Score=66.51 Aligned_cols=71 Identities=15% Similarity=0.215 Sum_probs=45.9
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHH---HHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAV---QTTMDRAIEKLSAHGLSRDDIVTL 101 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~---~~~i~~~~~~~~~~~~~~~~i~~I 101 (500)
+++|||+|+|++|++++|. + +++.+.+.+++... ..+++++.+.+ .+.+.+++++ .++...+|.+|
T Consensus 3 ~vlgidiGgt~ik~al~d~-~-~il~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~---~~~~~~~i~gI 71 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFED-E-RMVKMQNFSHSPDE------LGRFQKILDQLEFREKIARQFVEE---TGYSLSSFSAF 71 (381)
T ss_dssp EEEEEEECSSEEEEEEEET-T-EEEEEEEEECCHHH------HHTCSSGGGGHHHHHHHHHHHHHT---TTCCGGGCSEE
T ss_pred eEEEEECCccceeEEEEec-c-hheeeeecccCccc------ccchhhHHHHHHHHHHHHHHHHHH---cCCCccCceEE
Confidence 5677999999999999997 6 88888777664210 00122233344 5666666654 55555678888
Q ss_pred EEcCCc
Q psy9709 102 GITNQR 107 (500)
Q Consensus 102 gis~~~ 107 (500)
|+..+
T Consensus 72 -i~~pG 76 (381)
T 1saz_A 72 -VSRGG 76 (381)
T ss_dssp -EEECC
T ss_pred -EecCC
Confidence 66444
No 92
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=96.61 E-value=0.0004 Score=67.29 Aligned_cols=66 Identities=12% Similarity=0.128 Sum_probs=36.0
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 105 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~ 105 (500)
++|||+|+|++|++++| +|+++.+.+.+... + ...+++++++.+.+.+++++. ..++.+|||+.
T Consensus 2 ~lgiDiGGT~i~~~l~d--~g~il~~~~~~~~~--~----~~~~~~~~~~~i~~~i~~~~~--------~~~i~~igig~ 65 (291)
T 1zxo_A 2 ILIADSGSTKTDWCVVL--NGAVIKRLGTKGIN--P----FFQSEEEIQQKLTASLLPQLP--------EGKFNAVYFYG 65 (291)
T ss_dssp --CEECCTTCEEEEEEC--SSSEEEEEEECCCC--T----TTSCSTTTTTTTTC---------------------CEEEC
T ss_pred EEEEEeccccEEEEEEc--CCeEEEEEECCCCC--c----ccCCHHHHHHHHHHHHHHhcC--------cccccEEEEEc
Confidence 46799999999999999 59999877653310 1 122455566666666666542 24577788776
Q ss_pred Cc
Q psy9709 106 QR 107 (500)
Q Consensus 106 ~~ 107 (500)
-+
T Consensus 66 pG 67 (291)
T 1zxo_A 66 AG 67 (291)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 93
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=96.59 E-value=0.0031 Score=60.97 Aligned_cols=68 Identities=21% Similarity=0.186 Sum_probs=48.0
Q ss_pred EEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 155 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 234 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs~ 234 (500)
++|||+|+|++|++++| + |+++...+.+... + ...+++++++.+.+++++.. +.+..++.+|+++.
T Consensus 2 ~lgiDiGGT~~~~~l~d-~-g~il~~~~~~~~~--~----~~~~~~~~~~~i~~~i~~~~------~~~~~~i~~igig~ 67 (291)
T 1zbs_A 2 ILIGDSGSTKTDWCIAK-E-GKSLGRFQTSGIN--P----FQQDRNEIDTALRSEVLPAI------GQKASSIRAVYFYG 67 (291)
T ss_dssp EEEEEECSSEEEEEEEE-T-TEEEEEEEEECCC--T----TTSCHHHHHHHHTTTTHHHH------TTSTTTCCEEEEEE
T ss_pred EEEEEeCccceEEEEEe-C-CeEEEEEECCCCC--c----ccCCHHHHHHHHHHHHHHHh------CCCcccccEEEEEC
Confidence 68999999999999999 6 9999776553310 0 01356778887777776543 22345688888887
Q ss_pred CC
Q psy9709 235 QR 236 (500)
Q Consensus 235 ~~ 236 (500)
++
T Consensus 68 pG 69 (291)
T 1zbs_A 68 AG 69 (291)
T ss_dssp TT
T ss_pred CC
Confidence 76
No 94
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=96.58 E-value=0.001 Score=61.80 Aligned_cols=82 Identities=12% Similarity=0.061 Sum_probs=51.0
Q ss_pred cccCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 149 QTQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 228 (500)
Q Consensus 149 ~~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~ 228 (500)
|+++.+++|||+|+|++| ++|.+ |++ ..+.+++ . ..+++++.+.+.+ ++++ .++.
T Consensus 2 m~~~~~~lgiDIGGT~i~--~~d~~-g~~--~~~~~t~----~----~~~~~~~~~~i~~----~i~~--------~~i~ 56 (226)
T 3lm2_A 2 MAEDQTVLAIDIGGSHVK--IGLST-DGE--ERKVESG----K----TMTGPEMVAAVTA----MAKD--------MTYD 56 (226)
T ss_dssp CGGGCCEEEEEECSSEEE--EEETT-TCC--EEEEECC----T----TCCHHHHHHHHHH----HTTT--------CCCS
T ss_pred CCcCCEEEEEEECCCEEE--EEECC-CCE--EEEEECC----C----CCCHHHHHHHHHH----HHHh--------CCCC
Confidence 345668999999999999 47864 876 2333332 1 1355665555443 3321 2688
Q ss_pred EEEEcCCCceeEEEeCCCCcccc-cce--eeccCC
Q psy9709 229 TLGITNQRETTVVWDLNTGEPLY-NAI--VWSDTR 260 (500)
Q Consensus 229 ~I~vs~~~~~~v~~d~~~G~~l~-~~i--~w~D~r 260 (500)
+||++.++ ++|. ++.... |.+ .|.+..
T Consensus 57 gigi~~pG----~Vd~-~~~~~~~~nl~~~w~~~~ 86 (226)
T 3lm2_A 57 VIAMGYPG----PVVH-NKPLREPVNLGEGWVGYD 86 (226)
T ss_dssp EEEEEESS----CEET-TEECSCCTTSCSCCTTCC
T ss_pred EEEEEEEe----EEEC-CeEEEECCcCCccccCCc
Confidence 89998887 7887 454443 345 577654
No 95
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=96.50 E-value=0.0023 Score=64.18 Aligned_cols=84 Identities=14% Similarity=0.049 Sum_probs=56.4
Q ss_pred cEEEEEecCCCcceEEEEeCC---CCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 24 PLIGVIDEGTRTVRFAIISAL---TQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 100 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~---~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 100 (500)
.+++|||+|+|++|++++|.. +|+++.+.+. ++ . .+++++.+.+.+.++++... .+.+|.+
T Consensus 29 ~~~lgiDiGgt~i~~~l~d~~~~~~g~il~~~~~-~~----~-----~~~~~~~~~i~~~i~~~~~~------~~~~i~g 92 (373)
T 2q2r_A 29 PLTFVGDVGGTSARMGFVREGKNDSVHACVTRYS-MK----R-----KDITEIIEFFNEIIELMPAS------VMKRVKA 92 (373)
T ss_dssp CEEEEEEECSSEEEEEEEEECGGGCEEEEEEEEE-CT----T-----CBGGGHHHHHHHHHHHSCHH------HHTTEEE
T ss_pred CeEEEEEEccccEEEEEEecccCCCccEEEEeee-cC----C-----CCHHHHHHHHHHHHHHHhhc------ccccccE
Confidence 367789999999999999951 5888876541 11 1 35677787777777765432 1356888
Q ss_pred EEEcCCcceeEEeeCCCCCccccccccCC
Q psy9709 101 LGITNQRETTVVWDLNTGEPLYNAIDKMP 129 (500)
Q Consensus 101 Igis~~~~~~v~~d~~~g~pl~p~i~w~d 129 (500)
|||+..+ ++|. |....|...|.+
T Consensus 93 igi~~pG----~vd~--g~v~~~~~~~~~ 115 (373)
T 2q2r_A 93 GVINVPG----PVTG--GAVGGPFNNLKG 115 (373)
T ss_dssp EEEEESS----CEET--TTEECCCSSSBS
T ss_pred EEEEeec----cccC--CEEeccCCCCCC
Confidence 9888776 5676 555545444654
No 96
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=96.42 E-value=0.008 Score=59.19 Aligned_cols=80 Identities=13% Similarity=0.038 Sum_probs=50.6
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
.+.+++|||+|.|++|++++|.++|+++...+.++.. .+. +.+.+++++++ .+ .+|.+|
T Consensus 12 ~~~~~lgiDiGGT~i~~~l~dl~~g~i~~~~~~~~~~-----------~~~----~~~~i~~~~~~---~~---~~i~gi 70 (332)
T 1sz2_A 12 STKYALVGDVGGTNARLALCDIASGEISQAKTYSGLD-----------YPS----LEAVIRVYLEE---HK---VEVKDG 70 (332)
T ss_dssp --CEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-----------CSC----HHHHHHHHHHH---SC---CCCCEE
T ss_pred CCCEEEEEEechhheEEEEEECCCCcEEEEEEecCCC-----------cCC----HHHHHHHHHHh---cC---CCccEE
Confidence 3568999999999999999995348888655444321 011 23344444443 12 357888
Q ss_pred EEcCCCceeEEEeCCCCcccccceeec
Q psy9709 231 GITNQRETTVVWDLNTGEPLYNAIVWS 257 (500)
Q Consensus 231 ~vs~~~~~~v~~d~~~G~~l~~~i~w~ 257 (500)
+|+.++ ++|. +....+.+.|.
T Consensus 71 gi~~pG----~vd~--~~~~~~nl~w~ 91 (332)
T 1sz2_A 71 CIAIAC----PITG--DWVAMTNHTWA 91 (332)
T ss_dssp EEEESS----CCCS--SEECCSSSCCC
T ss_pred EEEEeC----ceeC--CEEeeeCCCCc
Confidence 988887 6774 45445566685
No 97
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=96.35 E-value=0.0043 Score=62.22 Aligned_cols=84 Identities=14% Similarity=0.064 Sum_probs=57.9
Q ss_pred CCEEEEEeccCCCceEEEEeC----CCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCe
Q psy9709 152 VPLIGVIDEGTRTVRFAIISA----LTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDI 227 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~----~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I 227 (500)
..+++|||+|.|++|++++|. + |+++...+. ++ . .+++++.+.+.+.++++.... +.+|
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~~~~~~-g~il~~~~~-~~----~-----~~~~~~~~~i~~~i~~~~~~~------~~~i 90 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVREGKNDS-VHACVTRYS-MK----R-----KDITEIIEFFNEIIELMPASV------MKRV 90 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEECGGGC-EEEEEEEEE-CT----T-----CBGGGHHHHHHHHHHHSCHHH------HTTE
T ss_pred CCeEEEEEEccccEEEEEEecccCCC-ccEEEEeee-cC----C-----CCHHHHHHHHHHHHHHHhhcc------cccc
Confidence 458999999999999999997 5 988876541 11 1 256677777777776654321 2468
Q ss_pred eEEEEcCCCceeEEEeCCCCcccccceeecc
Q psy9709 228 VTLGITNQRETTVVWDLNTGEPLYNAIVWSD 258 (500)
Q Consensus 228 ~~I~vs~~~~~~v~~d~~~G~~l~~~i~w~D 258 (500)
.+|+++.++ ++|. |....|...|.+
T Consensus 91 ~gigi~~pG----~vd~--g~v~~~~~~~~~ 115 (373)
T 2q2r_A 91 KAGVINVPG----PVTG--GAVGGPFNNLKG 115 (373)
T ss_dssp EEEEEEESS----CEET--TTEECCCSSSBS
T ss_pred cEEEEEeec----cccC--CEEeccCCCCCC
Confidence 899998887 7776 565544334554
No 98
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=96.24 E-value=0.013 Score=60.23 Aligned_cols=77 Identities=6% Similarity=-0.049 Sum_probs=51.3
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeE---EEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEE---VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 229 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~v---i~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~ 229 (500)
..+++||+|+|++|++++|.+ |+. +...+.++|. +- ..-+.+++++.+.+++++++++.. .......+.|
T Consensus 61 G~~laiDlGGTnirv~lV~~~-G~~~~~~~~~~~~ip~----~~-~~~~~~~lfd~Ia~~i~~~~~~~~-~~~~~~~~lG 133 (457)
T 2yhx_A 61 GSFLAIVMGGGDLEVILISLA-GRQESSIXASRSLAAA----MS-TTAIPSDLWGNXAXSNAAFSSXEF-SSXAGSVPLG 133 (457)
T ss_dssp EEEEEEEECSSEEEEEEEEEE-TTEEEEEEEEEECCTT----TT-SCSCTHHHHHHHHHHHHHHHHHHT-SSCSSCEEEE
T ss_pred ceEEEEEeCCCeEEEEEEEeC-CCeeEEEeeEEEEcCC----cc-CCCCHHHHHHHHHHHHHHHHhhcc-ccccccccee
Confidence 356999999999999999985 877 4444333331 10 122678999999999999887521 0111122568
Q ss_pred EEEcCCC
Q psy9709 230 LGITNQR 236 (500)
Q Consensus 230 I~vs~~~ 236 (500)
|+++.++
T Consensus 134 i~fs~P~ 140 (457)
T 2yhx_A 134 FTFXEAG 140 (457)
T ss_dssp EECCSCC
T ss_pred eEEEEEE
Confidence 8888776
No 99
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=96.12 E-value=0.017 Score=57.16 Aligned_cols=151 Identities=16% Similarity=0.116 Sum_probs=77.7
Q ss_pred EEEEEecCCCcceEEEEeCC-CCcEEEEEEeeeeeecCCCCcc---ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 25 LIGVIDEGTRTVRFAIISAL-TQEEVVSHSMDISTISPQEGWA---EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 100 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~-~g~~l~~~~~~~~~~~~~~g~~---e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 100 (500)
.+++||+||.++|..|++.. +|.+....+.... ..-..|-. ..++ +-.+..++++++..+.+++.+ .++|.+
T Consensus 17 ~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~-vrLg~g~~~~g~ls~-eai~r~~~aL~~f~~~~~~~~--v~~v~~ 92 (343)
T 3cer_A 17 TVAGIDCGTNSIRLKIARVDADGMHEVVPRILRV-IRLGQDVDKTHRFAD-EALERAYVAAREFAGVIAEHP--IDGLRF 92 (343)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEEEC-CCTTTTHHHHSSCCH-HHHHHHHHHHHHHHHHHTTSC--CSEEEE
T ss_pred eEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEE-eeCCCCccccCCcCH-HHHHHHHHHHHHHHHHHHHCC--CCeEEE
Confidence 57889999999999999962 2322222222222 12223321 1233 455566677777666553343 467999
Q ss_pred EEEcCCcceeEEeeCCCCCccccccc--------cCCccccCCCCCCCCCCCCcccc-ccCCEEEEEeccCCCceEEEEe
Q psy9709 101 LGITNQRETTVVWDLNTGEPLYNAID--------KMPSLVYNTPPEPSSNTNNNSIQ-TQVPLIGVIDEGTRTVRFAIIS 171 (500)
Q Consensus 101 Igis~~~~~~v~~d~~~g~pl~p~i~--------w~d~~~~~~t~~~~~~~~n~~~~-~~~~~~lgIDiGTts~k~~l~d 171 (500)
++-++.| |+.|++-+-.-+- +.+..-..+..|. .. .+..-. ....-.+.+|||+.|+-.++++
T Consensus 93 vATsA~R------~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~-gv-~~~~~~~~~~~~~lviDIGGGStel~~~~ 164 (343)
T 3cer_A 93 VATSATR------DAENREEFEDEIERILGVRPEVIPGTEEADLSFL-GA-TSVVNRDDLPAPYLVVDLGGGSTELVIGG 164 (343)
T ss_dssp EECHHHH------HCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHH-HH-HSSCCTTTCCSSEEEEEECSSCEEEEECC
T ss_pred EecHHHH------cCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHH-HH-HhhCccccccCCEEEEEeCCCceEEEEee
Confidence 9999988 4434443322221 1111100000111 00 000000 0112267799999999999987
Q ss_pred C--CC--CeEEEEeeeeccc
Q psy9709 172 A--LT--QEEVVSHSMDIST 187 (500)
Q Consensus 172 ~--~~--G~vi~~~~~~~~~ 187 (500)
. .. ++++...+.++..
T Consensus 165 ~~~~~~~~~~~~~~SlplG~ 184 (343)
T 3cer_A 165 DGVSAPTTQVQGAFSMNIGS 184 (343)
T ss_dssp CSSSSCTTSCSEEEEESCCH
T ss_pred cCccCcccccceeEEEehhH
Confidence 4 21 3344555666543
No 100
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=96.11 E-value=0.019 Score=59.22 Aligned_cols=59 Identities=7% Similarity=0.150 Sum_probs=40.0
Q ss_pred EEEEEecCCCcceEEEEeCCCCcE-EEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHH
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEE-VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEK 87 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~-l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~ 87 (500)
.+++||+|+||+|+++++. +|+- ....+..++. |.. ...-+.+++++.+.+++++.+++
T Consensus 81 ~~LalDlGGTn~Rv~~V~l-~g~~~~~~~~~~~~I--p~~-~~~~~~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 81 DFLALDLGGTNLRVVLVKL-GGNHDFDTTQNKYRL--PDH-LRTGTSEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEESSSEEEEEEEEE-ESSSCEEEEEEEEEC--CTT-GGGSBHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCeEEEEEEEE-CCCCceEEEEEEEec--Cch-hccCCHHHHHHHHHHHHHHHHHH
Confidence 4566999999999999998 7752 1111222321 111 12224789999999999999877
No 101
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=96.10 E-value=0.015 Score=61.61 Aligned_cols=92 Identities=16% Similarity=0.213 Sum_probs=61.3
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCC------ccc---cCHHHHHHHHHHHHHHHHHHHH-hCCC
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEG------WAE---QDPMEILQAVQTTMDRAIEKLS-AHGL 93 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g------~~e---~d~~~~~~~~~~~i~~~~~~~~-~~~~ 93 (500)
.|=++||||||++.+.++|..+|+++++.+...+....... ++. ...+++-+++.+.+.++++++- +.++
T Consensus 206 ~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~i 285 (631)
T 3zyy_X 206 VFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHGV 285 (631)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 46677999999999999998799999998877664332221 332 2234566666666666665543 2688
Q ss_pred CCCCeeEEEEcC---CcceeEEeeC
Q psy9709 94 SRDDIVTLGITN---QRETTVVWDL 115 (500)
Q Consensus 94 ~~~~i~~Igis~---~~~~~v~~d~ 115 (500)
++++|..+.|.+ |.|=++-+|.
T Consensus 286 ~~~~I~~~~v~GNt~M~hLllgi~p 310 (631)
T 3zyy_X 286 EKKEIMAAVVAGNTTMTHLFLEIDP 310 (631)
T ss_dssp CGGGEEEEEEEECHHHHHHHHTCCC
T ss_pred CHHHeeEEEEEccHHHHHHHcCCCh
Confidence 888888877764 3333344444
No 102
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=96.05 E-value=0.015 Score=55.50 Aligned_cols=65 Identities=18% Similarity=0.235 Sum_probs=41.7
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
|++|||+|||++|++++|.. ++++.....+.. . .++. ....++++.++ .+....++..++++
T Consensus 2 ~~lGID~GsT~tk~av~d~~-~~il~~~~~~~g-------~---~~e~----a~~vl~~~~~~---a~~~~~~~~~~a~t 63 (276)
T 4ehu_A 2 YTMGLDIGSTASKGVILKNG-EDIVASETISSG-------T---GTTG----PSRVLEKLYGK---TGLAREDIKKVVVT 63 (276)
T ss_dssp EEEEEEECSSCEEEEEEETT-TEEEEEEEESCC-------T---TSSH----HHHHHHHHHHH---HCCCGGGEEEEEEE
T ss_pred eEEEEEcCccEEEEEEEECC-CeEEEEEEecCC-------C---CHHH----HHHHHHHHHHH---CCCcchhccccccC
Confidence 68999999999999999964 888865433221 1 1111 22345555554 35566778777776
Q ss_pred CCC
Q psy9709 234 NQR 236 (500)
Q Consensus 234 ~~~ 236 (500)
+.+
T Consensus 64 ~~~ 66 (276)
T 4ehu_A 64 GYG 66 (276)
T ss_dssp STT
T ss_pred chH
Confidence 543
No 103
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=96.03 E-value=0.026 Score=58.97 Aligned_cols=153 Identities=11% Similarity=0.076 Sum_probs=80.8
Q ss_pred ccCcEEEEEecCCCcceEEEEeCCCC--cEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCe
Q psy9709 21 TQVPLIGVIDEGTRTVRFAIISALTQ--EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDI 98 (500)
Q Consensus 21 m~~~~i~giDiGtt~~k~~v~d~~~g--~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i 98 (500)
|....+++||+||.++|..|++..+| +++...+.....-..-...-..++ +-.+..++++++..+.++ ....++|
T Consensus 8 ~~~~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~Ls~-eai~r~~~~L~~f~~~~~--~~~v~~v 84 (513)
T 1u6z_A 8 PRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSE-EAMTRGLNCLSLFAERLQ--GFSPASV 84 (513)
T ss_dssp ----CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCCBCH-HHHHHHHHHHHHHHHHTT--TCCGGGE
T ss_pred ccCCeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCCcCH-HHHHHHHHHHHHHHHHHH--hCCCCEE
Confidence 33345788999999999999997333 233333333321111010112333 455566677777766542 3345689
Q ss_pred eEEEEcCCcceeEEeeCCCCCccccccc--------cCCccccCCCCCCCCCCCCccccccCCEEEEEeccCCCceEEEE
Q psy9709 99 VTLGITNQRETTVVWDLNTGEPLYNAID--------KMPSLVYNTPPEPSSNTNNNSIQTQVPLIGVIDEGTRTVRFAII 170 (500)
Q Consensus 99 ~~Igis~~~~~~v~~d~~~g~pl~p~i~--------w~d~~~~~~t~~~~~~~~n~~~~~~~~~~lgIDiGTts~k~~l~ 170 (500)
.+++-++.| |+.|+.-+-.-+- +.+..-..+..|. .. .+ ...... -.+.+|||+.|+-.+++
T Consensus 85 ~~vATsA~R------~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~-gv-~~-~~~~~~-~~lviDIGGGStEl~~~ 154 (513)
T 1u6z_A 85 CIVGTHTLR------QALNATDFLKRAEKVIPYPIEIISGNEEARLIFM-GV-EH-TQPEKG-RKLVIDIGGGSTELVIG 154 (513)
T ss_dssp EEEECHHHH------HCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHH-HH-HH-HSCCCS-CEEEEEECSSCEEEEEE
T ss_pred EEEecHHHH------cCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHH-HH-Hh-hccCCC-CEEEEEECCCcEEEEEE
Confidence 999999888 4433432221111 1100000000111 00 00 011111 36789999999999999
Q ss_pred eCCCCeEEEEeeeecccc
Q psy9709 171 SALTQEEVVSHSMDISTI 188 (500)
Q Consensus 171 d~~~G~vi~~~~~~~~~~ 188 (500)
+. +++....+.+...+
T Consensus 155 ~~--~~~~~~~Sl~lG~v 170 (513)
T 1u6z_A 155 EN--FEPILVESRRMGCV 170 (513)
T ss_dssp ET--TEEEEEEEESCCHH
T ss_pred eC--CeeeEEEEEeccHH
Confidence 83 78887777776644
No 104
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=95.99 E-value=0.011 Score=62.57 Aligned_cols=84 Identities=17% Similarity=0.255 Sum_probs=60.4
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCC------eEEEC---hHHHHHHHHHHHHHHHHHHH-hCC
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEG------WAEQD---PMEILQAVQTTMDRAIEKLS-AHG 221 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g------~~~~d---~~~~~~~i~~~l~~~~~~~~-~~~ 221 (500)
..|-++||+|||++.+.++|..+|++++..+..+|+.....+ ++.++ .+++-+.+.+.+.++++++. +.+
T Consensus 205 ~~~GlAvDiGTTtv~~~LvdL~tG~~l~~~~~~NpQ~~~G~DVisRI~~a~~~~~g~~~L~~~v~~~in~li~~l~~~~~ 284 (631)
T 3zyy_X 205 RVFGLAIDIGTTTVVVQLVDLVSGKVLGTKGNYNKQAAFGDDVISRIIYVDENPDGAEKLRKAVLSTINELIFQLCKEHG 284 (631)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEEECGGGGTCSSHHHHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEecccceeEEEEECCCCCEEEeecccCCCCCcchHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 457899999999999999999899999999888887543222 11112 23455556666666666543 458
Q ss_pred CCCCCeeEEEEcCC
Q psy9709 222 LSRDDIVTLGITNQ 235 (500)
Q Consensus 222 ~~~~~I~~I~vs~~ 235 (500)
+++++|..+.+.+.
T Consensus 285 i~~~~I~~~~v~GN 298 (631)
T 3zyy_X 285 VEKKEIMAAVVAGN 298 (631)
T ss_dssp CCGGGEEEEEEEEC
T ss_pred CCHHHeeEEEEEcc
Confidence 88999988888764
No 105
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=95.94 E-value=0.017 Score=64.70 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=48.9
Q ss_pred EEEEEecCCCcceEEEEeCCC-Cc--EEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALT-QE--EVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 101 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~-g~--~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~I 101 (500)
.++|||+|+||+|+++++. + |+ ++...+..+..-.+ -...+.+++++.+.+++++.+++ .++..+.+ .|
T Consensus 527 ~~lalDlGGTn~Rv~~V~l-~~g~~~~~~~~~~~~~ip~~---~~~~~~~~lfd~Ia~~i~~~l~~---~~~~~~~l-~l 598 (917)
T 1cza_N 527 DFLALDLGGTNFRVLLVKI-RSGKKRTVEMHNKIYAIPIE---IMQGTGEELFDHIVSCISDFLDY---MGIKGPRM-PL 598 (917)
T ss_dssp EEEEEEESSSSEEEEEEEE-ECSTTCEEEEEEEEECCCHH---HHTSBHHHHHHHHHHHHHHHHHH---HTCCSSCC-EE
T ss_pred EEEEEEECCCcEEEEEEEe-CCCcceeEEeeeeEEecCcc---cccCCHHHHHHHHHHHHHHHHHH---cCCCccce-eE
Confidence 4566999999999999997 5 54 66444443332110 01235789999999999999876 44444444 55
Q ss_pred EEcCCc
Q psy9709 102 GITNQR 107 (500)
Q Consensus 102 gis~~~ 107 (500)
|++.-.
T Consensus 599 G~tfsf 604 (917)
T 1cza_N 599 GFTFSF 604 (917)
T ss_dssp EEEECS
T ss_pred EEEeec
Confidence 555433
No 106
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=95.85 E-value=0.001 Score=64.41 Aligned_cols=67 Identities=12% Similarity=0.121 Sum_probs=34.8
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
+++|||+|+|++|++++| + |+++...+.+... +. ..+++++++.+.+++++++. ..++.+|+++
T Consensus 1 ~~lgiDiGGT~i~~~l~d-~-g~il~~~~~~~~~--~~----~~~~~~~~~~i~~~i~~~~~--------~~~i~~igig 64 (291)
T 1zxo_A 1 MILIADSGSTKTDWCVVL-N-GAVIKRLGTKGIN--PF----FQSEEEIQQKLTASLLPQLP--------EGKFNAVYFY 64 (291)
T ss_dssp ---CEECCTTCEEEEEEC-S-SSEEEEEEECCCC--TT----TSCSTTTTTTTTC---------------------CEEE
T ss_pred CEEEEEeccccEEEEEEc-C-CeEEEEEECCCCC--cc----cCCHHHHHHHHHHHHHHhcC--------cccccEEEEE
Confidence 368999999999999999 6 9999876553311 10 01234455555555554432 2357778888
Q ss_pred CCC
Q psy9709 234 NQR 236 (500)
Q Consensus 234 ~~~ 236 (500)
.++
T Consensus 65 ~pG 67 (291)
T 1zxo_A 65 GAG 67 (291)
T ss_dssp CTT
T ss_pred cCC
Confidence 776
No 107
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.80 E-value=0.048 Score=53.16 Aligned_cols=149 Identities=11% Similarity=0.121 Sum_probs=79.8
Q ss_pred EEEEEecCCCcceEEEEeCCCCcE--EEEEEeeeeeecCCCCccc---cCHHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEE--VVSHSMDISTISPQEGWAE---QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 99 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~--l~~~~~~~~~~~~~~g~~e---~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 99 (500)
.+++||+||.++|..|++..++.+ +...+... ....|-.+ .++ +-.+..++++++..+.+++.++ ++|.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~v---rLg~g~~~~g~ls~-eai~r~~~~L~~f~~~~~~~~v--~~i~ 86 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRIT---SLGTKVKETGRLQE-DRIEETIQVLKEYKKLIDEFKV--ERVK 86 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEEC---CTTTTHHHHSSCCH-HHHHHHHHHHHHHHHHHHHTTC--SEEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEe---ecCCCccccCCcCH-HHHHHHHHHHHHHHHHHHHCCC--CeEE
Confidence 467799999999999999733422 33333222 22233211 223 3444556666666555443543 5799
Q ss_pred EEEEcCCcceeEEeeCCCCCccccccc-cCCcccc----CCCCCCCCCCCCccccccCCEEEEEeccCCCceEEEEeCCC
Q psy9709 100 TLGITNQRETTVVWDLNTGEPLYNAID-KMPSLVY----NTPPEPSSNTNNNSIQTQVPLIGVIDEGTRTVRFAIISALT 174 (500)
Q Consensus 100 ~Igis~~~~~~v~~d~~~g~pl~p~i~-w~d~~~~----~~t~~~~~~~~n~~~~~~~~~~lgIDiGTts~k~~l~d~~~ 174 (500)
+++-++.+ ++.+++-+-..+- -..-.+. ++.+++.-........ ...-.+.+|||+.|+-.++++ +
T Consensus 87 ~vATsA~R------~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~-~~~~~lvvDIGGGStEl~~~~-~- 157 (315)
T 1t6c_A 87 AVATEAIR------RAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK-PEGEVCVVDQGGGSTEYVFGK-G- 157 (315)
T ss_dssp EEECHHHH------TSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC-CCSEEEEEEEETTEEEEEEEE-T-
T ss_pred EEEcHHHH------cCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc-cCCCEEEEEeCCCcEEEEEEe-C-
Confidence 99999888 3434443322221 0000000 0001110000000011 123367899999999999998 3
Q ss_pred CeEEEEeeeecccc
Q psy9709 175 QEEVVSHSMDISTI 188 (500)
Q Consensus 175 G~vi~~~~~~~~~~ 188 (500)
++++...+.++..+
T Consensus 158 ~~~~~~~Sl~~G~v 171 (315)
T 1t6c_A 158 YKVREVISLPIGIV 171 (315)
T ss_dssp TEEEEEEEECCCHH
T ss_pred CceeeEEEEeccHH
Confidence 78877777776643
No 108
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=95.74 E-value=0.024 Score=53.91 Aligned_cols=64 Identities=20% Similarity=0.249 Sum_probs=45.2
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 105 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~ 105 (500)
+++||+|.|++|.++||. ++++...+.+++ .....+++...+ +++++. .+++..+|.+|.||+
T Consensus 2 lL~IDIGNT~ik~gl~~~--~~l~~~~r~~T~--------~~~t~de~~~~l----~~ll~~---~~~~~~~i~~iiISS 64 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE--GELRQHWRMETD--------RHKTEDEYGMLV----KQLLEH---EGLSFEDVKGIIVSS 64 (268)
T ss_dssp EEEEEECSSEEEEEEEET--TEEEEEEEEECC--------TTCCHHHHHHHH----HHHHHH---TTCCGGGCCEEEEEE
T ss_pred EEEEEECcCcEEEEEEEC--CEEEEEEEecCC--------CcCCHHHHHHHH----HHHHHH---cCCCcccCcEEEEEc
Confidence 456999999999999994 678877776654 223455665444 455554 666677889999986
Q ss_pred C
Q psy9709 106 Q 106 (500)
Q Consensus 106 ~ 106 (500)
-
T Consensus 65 V 65 (268)
T 2h3g_X 65 V 65 (268)
T ss_dssp S
T ss_pred c
Confidence 4
No 109
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=95.70 E-value=0.039 Score=56.07 Aligned_cols=79 Identities=16% Similarity=0.224 Sum_probs=54.0
Q ss_pred cCcEEEEEecCCCcceEEEEeCC-CC-cEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 22 QVPLIGVIDEGTRTVRFAIISAL-TQ-EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 99 (500)
Q Consensus 22 ~~~~i~giDiGtt~~k~~v~d~~-~g-~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 99 (500)
++.+++|||||||++|+++.... +| ++++....+..... .| .-.|.+..-+++.++++++-+. +++...+=+
T Consensus 6 ~~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~gv~--~G-~I~di~~~~~~I~~av~~ae~~---~g~~i~~~v 79 (419)
T 4a2a_A 6 KTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRGLD--EG-EIKDAIAFKESVNTLLKELEEQ---LQKSLRSDF 79 (419)
T ss_dssp -CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCSEE--TT-EESBHHHHHHHHHHHHHHHHHH---HTSCCCSEE
T ss_pred cCCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCCee--CC-EEEcHHHHHHHHHHHHHHHHHH---cCCCcCceE
Confidence 45678889999999999999752 23 78877766533221 22 4568998888888888887655 555544426
Q ss_pred EEEEcCC
Q psy9709 100 TLGITNQ 106 (500)
Q Consensus 100 ~Igis~~ 106 (500)
.+|+++.
T Consensus 80 ~v~i~g~ 86 (419)
T 4a2a_A 80 VISFSSV 86 (419)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 7788876
No 110
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.68 E-value=0.013 Score=55.16 Aligned_cols=62 Identities=13% Similarity=0.210 Sum_probs=43.5
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 105 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~ 105 (500)
+++||+|.|++|.++||. ++++...+.+++ .....+++...+.+.++. ...+|.+|.||+
T Consensus 5 ~L~IDIGNT~ik~gl~~~--~~l~~~~r~~T~--------~~~t~de~~~~l~~l~~~----------~~~~i~~i~IsS 64 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITED--GKTFRRWRLSTG--------VFQTEDELFSHLHPLLGD----------AMREIKGIGVAS 64 (249)
T ss_dssp EEEEEECSSEEEEEEESS--SSSCEEEEEECC--------TTCCHHHHHHHHHHHHGG----------GGGGEEEEEEEE
T ss_pred EEEEEECCCeEEEEEEEC--CEEEEEEEecCC--------CCCCHHHHHHHHHHHHhh----------ccccCCEEEEEc
Confidence 466999999999999984 678877776654 234567776665554432 135688999986
Q ss_pred Cc
Q psy9709 106 QR 107 (500)
Q Consensus 106 ~~ 107 (500)
-.
T Consensus 65 Vv 66 (249)
T 3bex_A 65 VV 66 (249)
T ss_dssp SC
T ss_pred Cc
Confidence 53
No 111
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=95.58 E-value=0.041 Score=56.44 Aligned_cols=74 Identities=15% Similarity=0.192 Sum_probs=47.5
Q ss_pred CEEEEEeccCCCceEEEEeCCCC-eE---EEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQ-EE---VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 228 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G-~v---i~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~ 228 (500)
..+++||+|+|++|+++++.. | +- +...+.+.|... . ..+.+++++.+.+|+++++++ .+...+. .
T Consensus 68 G~~lalDlGGTn~Rv~~V~l~-G~~~~~~i~~~~~~ip~~~-~----~~~~~~lfd~Ia~~i~~~l~~---~~~~~~~-~ 137 (451)
T 1bdg_A 68 GNFLALDLGGTNYRVLSVTLE-GKGKSPRIQERTYCIPAEK-M----SGSGTELFKYIAETLADFLEN---NGMKDKK-F 137 (451)
T ss_dssp EEEEEEEESSSSEEEEEEEEC-C-CCCCEEEEEEECCCTTT-T----TSBHHHHHHHHHHHHHHHHHH---TTCCSSC-E
T ss_pred ceEEEEEeCCCeEEEEEEecC-CCCcceEEEEEEEecCCcc-c----CCCHHHHHHHHHHHHHHHHHh---cCCCccc-c
Confidence 457999999999999999985 7 41 112222222110 1 125789999999999999875 3333333 4
Q ss_pred EEEEcCCC
Q psy9709 229 TLGITNQR 236 (500)
Q Consensus 229 ~I~vs~~~ 236 (500)
.+|++...
T Consensus 138 ~lG~tfsf 145 (451)
T 1bdg_A 138 DLGFTFSF 145 (451)
T ss_dssp EEEEEECS
T ss_pred ceEEEEee
Confidence 55665444
No 112
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=95.42 E-value=0.022 Score=54.04 Aligned_cols=65 Identities=15% Similarity=0.174 Sum_probs=44.3
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
.+|+||+|.|++|.++||. ++++...+.+++ . ...+++... ++.+++. .+++.++|.+|++|
T Consensus 3 MlL~IDIGNT~iK~gl~d~--~~l~~~~r~~T~-~--------~t~de~~~~----l~~ll~~---~~~~~~~I~~iiIS 64 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDG--DEIKLRFRHTSK-V--------STSDELGIF----LKSVLRE---NNCSPETIRKIAIC 64 (266)
T ss_dssp CEEEEEECSSEEEEEEEET--TEEEEEEEEECS-C--------CCHHHHHHH----HHHHHHT---TTCCGGGCCEEEEE
T ss_pred eEEEEEECCCeEEEEEEEC--CEEEEEEEecCC-C--------CCHHHHHHH----HHHHHHH---cCCChhhceEEEEe
Confidence 3789999999999999994 788877666554 1 345555433 3444432 34556678899988
Q ss_pred CCC
Q psy9709 234 NQR 236 (500)
Q Consensus 234 ~~~ 236 (500)
+..
T Consensus 65 SVv 67 (266)
T 3djc_A 65 SVV 67 (266)
T ss_dssp ESC
T ss_pred cch
Confidence 664
No 113
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=95.25 E-value=0.0099 Score=59.78 Aligned_cols=81 Identities=16% Similarity=0.202 Sum_probs=49.0
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHH---HHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAV---QTTMDRAIEKLSAHGLSRDDIVT 229 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i---~~~l~~~~~~~~~~~~~~~~I~~ 229 (500)
++++|||+|+|++|++++|. ++++...+.+++.... .+++++.+.+ .+.+.+++++ .++...+|.+
T Consensus 2 ~~vlgidiGgt~ik~al~d~--~~il~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~~l~~---~~~~~~~i~g 70 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFED--ERMVKMQNFSHSPDEL------GRFQKILDQLEFREKIARQFVEE---TGYSLSSFSA 70 (381)
T ss_dssp CEEEEEEECSSEEEEEEEET--TEEEEEEEEECCHHHH------HTCSSGGGGHHHHHHHHHHHHHT---TTCCGGGCSE
T ss_pred CeEEEEECCccceeEEEEec--chheeeeecccCcccc------cchhhHHHHHHHHHHHHHHHHHH---cCCCccCceE
Confidence 37899999999999999995 4888777666542100 0111223333 4455555432 3444457888
Q ss_pred EEEcCCCceeEEEeCCCCcc
Q psy9709 230 LGITNQRETTVVWDLNTGEP 249 (500)
Q Consensus 230 I~vs~~~~~~v~~d~~~G~~ 249 (500)
| ++.++ ++|..+|..
T Consensus 71 I-i~~pG----~vd~~~G~~ 85 (381)
T 1saz_A 71 F-VSRGG----LLDPIPGGV 85 (381)
T ss_dssp E-EEECC----SCSCBCSSE
T ss_pred E-EecCC----CCCCCCCce
Confidence 8 77666 566534554
No 114
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=94.47 E-value=0.071 Score=50.47 Aligned_cols=60 Identities=17% Similarity=0.133 Sum_probs=39.3
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHH
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAI 214 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~ 214 (500)
.+++++|||+||+++|++++|.+ ++++.....+...+ ++| ...|.+...+.+..+++.+.
T Consensus 26 ~~~~~~gIDiGS~s~k~vi~~~~-~~~l~~~~~~~~~l--~~g-~i~d~~~~~~~l~~~~~~~~ 85 (272)
T 3h1q_A 26 PPPYKVGVDLGTADIVLVVTDQE-GIPVAGALKWASVV--KDG-LVVDYIGAIQIVRELKAKVE 85 (272)
T ss_dssp CSCCEEEEECCSSEEEEEEECTT-CCEEEEEEEECCCC--BTT-BCTTHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEcccceEEEEEECCC-CcEEEEEeeccccc--CCC-EEEcHHHHHHHHHHHHHHHH
Confidence 34689999999999999999975 88887765554322 223 24455555555555544443
No 115
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=93.80 E-value=0.27 Score=49.82 Aligned_cols=79 Identities=16% Similarity=0.204 Sum_probs=50.2
Q ss_pred cCCEEEEEeccCCCceEEEEeCCC-C-eEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALT-Q-EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 228 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~-G-~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~ 228 (500)
.+++++||||||+++|+++..... | ++++....+..- -..| ...|.+..-+++.++++++-+. .+.....-.
T Consensus 6 ~~~~ivglDIGts~I~~vv~~~~~~~~~i~g~~~~~s~g--v~~G-~I~di~~~~~~I~~av~~ae~~---~g~~i~~~v 79 (419)
T 4a2a_A 6 KTVFYTSIDIGSRYIKGLVLGKRDQEWEALAFSSVKSRG--LDEG-EIKDAIAFKESVNTLLKELEEQ---LQKSLRSDF 79 (419)
T ss_dssp -CCEEEEEEECSSEEEEEEEEC----CEEEEEEEEECCS--EETT-EESBHHHHHHHHHHHHHHHHHH---HTSCCCSEE
T ss_pred cCCEEEEEEccCCEEEEEEEEEcCCCCEEEEEEEeccCC--eeCC-EEEcHHHHHHHHHHHHHHHHHH---cCCCcCceE
Confidence 467899999999999999997532 3 677766554321 1233 3678888877777777776443 244444413
Q ss_pred EEEEcCC
Q psy9709 229 TLGITNQ 235 (500)
Q Consensus 229 ~I~vs~~ 235 (500)
.+++++.
T Consensus 80 ~v~i~g~ 86 (419)
T 4a2a_A 80 VISFSSV 86 (419)
T ss_dssp EEEECCT
T ss_pred EEEEcCC
Confidence 5666655
No 116
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=93.69 E-value=0.16 Score=49.73 Aligned_cols=74 Identities=16% Similarity=0.260 Sum_probs=51.2
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCcc-ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWA-EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 103 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~-e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igi 103 (500)
+++|||.++..++++|++. |++++....... .+..|+. +.....-.+.+..++++++++ ++++.++|.+|++
T Consensus 2 ~iLgIdts~~~~~val~~~--g~i~~~~~~~~~--~~~gg~~p~~~~~~h~~~l~~~i~~~L~~---agi~~~did~Ia~ 74 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVSE--DKVLANVFDTLT--TEKGGIHPKEAAEHHARLMKPLLRKALSE---AGVSLDDIDVIAF 74 (330)
T ss_dssp CEEEEECSSSEEEEEEECS--SCEEEEEEEECC--CTTCCCCHHHHHHHHHHHHHHHHHHHHHH---HTCCTTTCCEEEE
T ss_pred EEEEEEccCCCeEEEEEEC--CEEEEEEEEEee--cccCCcCchhhHHHHHHHHHHHHHHHHHH---cCCCHHHCcEEEE
Confidence 4778999999999999984 688865543332 2222432 112334555667788888877 8899999999988
Q ss_pred cC
Q psy9709 104 TN 105 (500)
Q Consensus 104 s~ 105 (500)
+.
T Consensus 75 ~~ 76 (330)
T 2ivn_A 75 SQ 76 (330)
T ss_dssp EE
T ss_pred EC
Confidence 63
No 117
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=93.47 E-value=0.2 Score=51.51 Aligned_cols=60 Identities=7% Similarity=0.120 Sum_probs=39.7
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeE-EEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHH
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEE-VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEK 216 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~v-i~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~ 216 (500)
-.+++||+|+|++|+++++.. |+- .......++. |.. ...-+.+++++.+.+|+++.+++
T Consensus 80 G~~LalDlGGTn~Rv~~V~l~-g~~~~~~~~~~~~I--p~~-~~~~~~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 80 GDFLALDLGGTNLRVVLVKLG-GNHDFDTTQNKYRL--PDH-LRTGTSEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEEESSSEEEEEEEEEE-SSSCEEEEEEEEEC--CTT-GGGSBHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEecCCeEEEEEEEEC-CCCceEEEEEEEec--Cch-hccCCHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999985 641 1111222221 111 01113689999999999999876
No 118
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=93.39 E-value=0.11 Score=53.99 Aligned_cols=145 Identities=12% Similarity=0.078 Sum_probs=78.8
Q ss_pred EEEEEecCCCcceEEEEeCCCC--cEEEEEEeeeeeecCCCCcc---ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQ--EEVVSHSMDISTISPQEGWA---EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 99 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g--~~l~~~~~~~~~~~~~~g~~---e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~ 99 (500)
.+++||+||.++|..|++..++ +++...+.... -..|-. .-+++ -.+..+++++...+.++..++ ++|.
T Consensus 16 ~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vr---Lg~gl~~~g~Ls~e-ai~r~~~~L~~F~~~~~~~~v--~~v~ 89 (508)
T 3hi0_A 16 PVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCG---LGKGLALTGRMHEE-GVTRALMALRRFHVLSEQAQA--QKLY 89 (508)
T ss_dssp CEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECC---TTTTHHHHSSCCHH-HHHHHHHHHHHHHHHHHHTTC--SEEE
T ss_pred eEEEEEECCccEEEEEEEEcCCCceEEEEEeEEee---cccCccccCCcCHH-HHHHHHHHHHHHHHHHHhCCC--CeEE
Confidence 4678999999999999997333 33443332222 222321 12333 444556666665544433554 6799
Q ss_pred EEEEcCCcceeEEeeCCCCCccccccc--------cCCccccCCCCCCCCCCCCccccccCCEEEEEeccCCCceEEEEe
Q psy9709 100 TLGITNQRETTVVWDLNTGEPLYNAID--------KMPSLVYNTPPEPSSNTNNNSIQTQVPLIGVIDEGTRTVRFAIIS 171 (500)
Q Consensus 100 ~Igis~~~~~~v~~d~~~g~pl~p~i~--------w~d~~~~~~t~~~~~~~~n~~~~~~~~~~lgIDiGTts~k~~l~d 171 (500)
+++-++.+ |+.|+.-+-.-+- +.+..-..+..|. .. .+ ... ... .+.+|||+.|+-.++++
T Consensus 90 ~vATsA~R------~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~-gv-~~-~~~-~~~-~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 90 VLATAAAR------EAENGPDFIREAEAILGCEIEVLSGEKEALYSAY-GV-IS-GFY-QPD-GIAGDLGGGSLELIDIK 158 (508)
T ss_dssp EEECTHHH------HSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHH-HH-HH-HSS-SCE-EEEEEECSSCEEEEEEE
T ss_pred EEeeHHHH------cCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHH-HH-Hh-cCC-CCC-eEEEEeCCCceEEEEee
Confidence 99999888 4434443322221 1111100000111 00 00 001 112 37899999999999998
Q ss_pred CCCCeEEEEeeeecccc
Q psy9709 172 ALTQEEVVSHSMDISTI 188 (500)
Q Consensus 172 ~~~G~vi~~~~~~~~~~ 188 (500)
+ +++....+.+...+
T Consensus 159 -~-~~~~~~~Sl~lG~v 173 (508)
T 3hi0_A 159 -D-KSCGEGITLPLGGL 173 (508)
T ss_dssp -T-TEECCCEEESCCHH
T ss_pred -C-CeeeeEEEecceEE
Confidence 3 77776666666543
No 119
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=93.36 E-value=0.095 Score=49.74 Aligned_cols=64 Identities=20% Similarity=0.248 Sum_probs=41.8
Q ss_pred EEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcC
Q psy9709 155 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITN 234 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs~ 234 (500)
+|.||+|.|++|.++||. ++++...+.+++. .+..+++...+.. +++. .+++..+|.+|.+|+
T Consensus 2 lL~IDIGNT~ik~gl~~~--~~l~~~~r~~T~~--------~~t~de~~~~l~~----ll~~---~~~~~~~i~~iiISS 64 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEE--GELRQHWRMETDR--------HKTEDEYGMLVKQ----LLEH---EGLSFEDVKGIIVSS 64 (268)
T ss_dssp EEEEEECSSEEEEEEEET--TEEEEEEEEECCT--------TCCHHHHHHHHHH----HHHH---TTCCGGGCCEEEEEE
T ss_pred EEEEEECcCcEEEEEEEC--CEEEEEEEecCCC--------cCCHHHHHHHHHH----HHHH---cCCCcccCcEEEEEc
Confidence 578999999999999993 7777766555431 1345566555444 3332 345556788888764
Q ss_pred C
Q psy9709 235 Q 235 (500)
Q Consensus 235 ~ 235 (500)
.
T Consensus 65 V 65 (268)
T 2h3g_X 65 V 65 (268)
T ss_dssp S
T ss_pred c
Confidence 3
No 120
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=93.26 E-value=0.058 Score=50.65 Aligned_cols=62 Identities=13% Similarity=0.216 Sum_probs=41.6
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
.+|+||+|.|++|.++|| + ++++...+.+++. .+..+++...+...++. ...+|.+|.++
T Consensus 4 M~L~IDIGNT~ik~gl~~-~-~~l~~~~r~~T~~--------~~t~de~~~~l~~l~~~----------~~~~i~~i~Is 63 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITE-D-GKTFRRWRLSTGV--------FQTEDELFSHLHPLLGD----------AMREIKGIGVA 63 (249)
T ss_dssp EEEEEEECSSEEEEEEES-S-SSSCEEEEEECCT--------TCCHHHHHHHHHHHHGG----------GGGGEEEEEEE
T ss_pred eEEEEEECCCeEEEEEEE-C-CEEEEEEEecCCC--------CCCHHHHHHHHHHHHhh----------ccccCCEEEEE
Confidence 478999999999999998 3 6777666555441 13456766655544432 12468888887
Q ss_pred CC
Q psy9709 234 NQ 235 (500)
Q Consensus 234 ~~ 235 (500)
+.
T Consensus 64 SV 65 (249)
T 3bex_A 64 SV 65 (249)
T ss_dssp ES
T ss_pred cC
Confidence 54
No 121
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=92.84 E-value=0.34 Score=49.18 Aligned_cols=57 Identities=18% Similarity=0.182 Sum_probs=39.0
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHH
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEK 87 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~ 87 (500)
+++||+|+||.|+++++. .|. +...+..++. |.. ...-..+++++.+.+++.+.+++
T Consensus 61 ~LAlDlGGTn~RV~~V~l-~g~-~~~~~~~~~i--p~~-~~~g~~~~LFd~Ia~~i~~fl~~ 117 (445)
T 3hm8_A 61 FLALDLGGTNFRVLLVRV-TTG-VQITSEIYSI--PET-VAQGSGQQLFDHIVDCIVDFQQK 117 (445)
T ss_dssp EEEEEESSSSEEEEEEEE-SSS-EEEEEEEECC--CHH-HHTSBHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCeEEEEEEEE-CCc-eEEEEEEecc--Ccc-ccCCCHHHHHHHHHHHHHHHHHH
Confidence 466999999999999998 676 3222333321 110 01124688999999999999876
No 122
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=91.19 E-value=0.44 Score=48.72 Aligned_cols=59 Identities=12% Similarity=0.178 Sum_probs=40.4
Q ss_pred EEEEEecCCCcceEEEEeCCCCc-----EEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHH
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQE-----EVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEK 87 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~-----~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~ 87 (500)
.+++||+|+||.|+++++. .|+ .+...+..|+. |+. -..-..+++|+.+.+++.+.+++
T Consensus 78 ~fLAlDlGGTNfRV~~V~L-~g~~~~~~~~~~~~~~~~I--p~~-l~~gt~~eLFd~IA~~i~~fl~~ 141 (470)
T 3f9m_A 78 DFLSLDLGGTNFRVMLVKV-GEGEEGQWSVKTKHQMYSI--PED-AMTGTAEMLFDYISECISDFLDK 141 (470)
T ss_dssp EEEEEEESSSEEEEEEEEE-EC----CEEEEEEEEEEEC--CHH-HHSSBHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCceEEEEEEEE-CCCCCCcceEEEEEEeecC--ChH-hccCCHHHHHHHHHHHHHHHHhh
Confidence 3466999999999999997 553 34333444431 111 11225689999999999999887
No 123
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=91.04 E-value=0.42 Score=46.40 Aligned_cols=80 Identities=20% Similarity=0.249 Sum_probs=45.3
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeE--EEEeeeeccccc--CCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEE--VVSHSMDISTIS--PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDD 226 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~v--i~~~~~~~~~~~--~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 226 (500)
|.+.+.+||+||+|+|..+++...+.+ +...+.+...-. ...| ..++ +-.+...+|+++..+.+...+ .++
T Consensus 2 m~~~~A~IDiGSNsirL~I~~~~~~~~~~i~~~k~~vrLg~g~~~~g--~ls~-eai~r~~~~L~~f~~~~~~~~--v~~ 76 (315)
T 3mdq_A 2 MSQRIGVIDMGTNTFHLLITDIVNDRPHTLVNEKSAVGLGKGGITKG--FITE-EAMDRALDTLKKFRVILDEHA--VVH 76 (315)
T ss_dssp --CEEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCSSTTTGGGT--CCCH-HHHHHHHHHHHHHHHHHHHTT--CCE
T ss_pred CCceEEEEEecCCcEEEEEEEEcCCceEEeeeceeeeeccccccccC--CcCH-HHHHHHHHHHHHHHHHHHHcC--CCE
Confidence 344578899999999999999754533 333333332211 1122 2233 344555567776666555444 356
Q ss_pred eeEEEEcCC
Q psy9709 227 IVTLGITNQ 235 (500)
Q Consensus 227 I~~I~vs~~ 235 (500)
|.+++.++.
T Consensus 77 v~~vATsA~ 85 (315)
T 3mdq_A 77 VIATGTSAV 85 (315)
T ss_dssp EEEEECHHH
T ss_pred EEEEeeHHH
Confidence 777775543
No 124
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=91.00 E-value=0.38 Score=47.76 Aligned_cols=58 Identities=12% Similarity=0.040 Sum_probs=37.2
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCe--EEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHH
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQE--EVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDR 212 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~--vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~ 212 (500)
++.++|||+||+++|++++. + |+ +......++|...-++| ...|++.+..++.+++++
T Consensus 12 ~~~~vgiDiGt~~i~~~~~~-~-~~~~i~~~g~~~~ps~~~~~g-~i~d~~~~~~~ik~~~~~ 71 (377)
T 2ych_A 12 RVEALGLEIGASALKLVEVS-G-NPPALKALASRPTPPGLLMEG-MVAEPAALAQEIKELLLE 71 (377)
T ss_dssp CCCCEEEEECSSEEEEEEEE-T-TTTEEEEEEEEECCTTSEETT-EESCHHHHHHHHHHHHHH
T ss_pred CCceEEEEeCCCeEEEEEEe-C-CceEEEEEEeEECCCCcccCC-CcCCHHHHHHHHHHHHHH
Confidence 45678999999999999997 3 54 54455555553222233 356777766666555554
No 125
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=90.41 E-value=0.089 Score=52.73 Aligned_cols=33 Identities=30% Similarity=0.479 Sum_probs=25.8
Q ss_pred ccCcEEEEEecCCCcceEEEEeCCCCcEEEEEE
Q psy9709 21 TQVPLIGVIDEGTRTVRFAIISALTQEEVVSHS 53 (500)
Q Consensus 21 m~~~~i~giDiGtt~~k~~v~d~~~g~~l~~~~ 53 (500)
|+.++|++|..|+||+|..|||..+++++.+..
T Consensus 16 Ms~klILviN~GSSS~K~~lf~~~~~~~l~~G~ 48 (415)
T 3sk3_A 16 MSSKLVLVLNCGSSSLKFAIIDAVNGDEYLSGL 48 (415)
T ss_dssp --CCEEEEEEECSSCEEEEEEETTTCCEEEEEE
T ss_pred CCCCeEEEEeCchHhhhheeEECCCCCEEEEee
Confidence 455778899999999999999964677777653
No 126
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=90.10 E-value=0.64 Score=45.50 Aligned_cols=75 Identities=19% Similarity=0.234 Sum_probs=52.2
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCcc-ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWA-EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 102 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~-e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Ig 102 (500)
.+|+|||-.+..+-++|++. +++++....... .+..|.+ |.....-.+.+...+++++++ ++++.++|.+|+
T Consensus 6 M~iLgIdts~~~~svAl~~~--~~i~~~~~~~~~--~~~gGv~p~~a~~~H~~~l~~~i~~~L~~---ag~~~~did~Ia 78 (334)
T 3eno_A 6 MIVLGLEGTAHTISCGIIDE--SRILAMESSMYR--PKTGGIRPLDAAVHHSEVIDTVISRALEK---AKISIHDIDLIG 78 (334)
T ss_dssp CEEEEEECSSSEEEEEEEES--SCCCEEEEEECC--CSSCSCCHHHHHHHHHHHHHHHHHHHHHH---HTCCGGGCCEEE
T ss_pred ceEEEEECCCcCeEEEEEEC--CEEEEEEEEeec--cccCCcCcchHHHHHHHHHHHHHHHHHHH---cCCCHHHCCEEE
Confidence 46888998888899999984 678875443322 1222322 112334556777888888887 889999999999
Q ss_pred EcC
Q psy9709 103 ITN 105 (500)
Q Consensus 103 is~ 105 (500)
++.
T Consensus 79 v~~ 81 (334)
T 3eno_A 79 FSM 81 (334)
T ss_dssp EEC
T ss_pred EEc
Confidence 885
No 127
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=89.70 E-value=0.48 Score=47.00 Aligned_cols=72 Identities=13% Similarity=0.099 Sum_probs=42.0
Q ss_pred cEEEEEecCCCcceEEEEeCCCCc--EEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQE--EVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 101 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~--~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~I 101 (500)
..++|||+|||++|+++++. |+ +......+++...-..| .-.|++.+.+++.+++++ .++... -+.+
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~--~~~~i~~~g~~~~ps~~~~~g-~i~d~~~~~~~ik~~~~~-------~~~~~~-~v~~ 81 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSG--NPPALKALASRPTPPGLLMEG-MVAEPAALAQEIKELLLE-------ARTRKR-YVVT 81 (377)
T ss_dssp CCCEEEEECSSEEEEEEEET--TTTEEEEEEEEECCTTSEETT-EESCHHHHHHHHHHHHHH-------HTCCCC-EEEE
T ss_pred CceEEEEeCCCeEEEEEEeC--CceEEEEEEeEECCCCcccCC-CcCCHHHHHHHHHHHHHH-------cCCCcc-eEEE
Confidence 45667999999999999963 44 44444444442111122 345787776666665554 233333 3456
Q ss_pred EEcCC
Q psy9709 102 GITNQ 106 (500)
Q Consensus 102 gis~~ 106 (500)
++++.
T Consensus 82 ~i~~~ 86 (377)
T 2ych_A 82 ALSNL 86 (377)
T ss_dssp EECGG
T ss_pred EecCC
Confidence 77653
No 128
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=88.70 E-value=0.73 Score=44.98 Aligned_cols=73 Identities=16% Similarity=0.247 Sum_probs=46.2
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeE-EEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEE
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWA-EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGI 232 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~-~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~v 232 (500)
++||||.++..+++++++ + |+++......+. .+..|+. +.....-.+.+..++++++++ ++++.++|.+|++
T Consensus 2 ~iLgIdts~~~~~val~~-~-g~i~~~~~~~~~--~~~gg~~p~~~~~~h~~~l~~~i~~~L~~---agi~~~did~Ia~ 74 (330)
T 2ivn_A 2 LALGIEGTAHTLGIGIVS-E-DKVLANVFDTLT--TEKGGIHPKEAAEHHARLMKPLLRKALSE---AGVSLDDIDVIAF 74 (330)
T ss_dssp CEEEEECSSSEEEEEEEC-S-SCEEEEEEEECC--CTTCCCCHHHHHHHHHHHHHHHHHHHHHH---HTCCTTTCCEEEE
T ss_pred EEEEEEccCCCeEEEEEE-C-CEEEEEEEEEee--cccCCcCchhhHHHHHHHHHHHHHHHHHH---cCCCHHHCcEEEE
Confidence 489999999999999998 3 788865443332 2222332 111122333455566666655 4788889999987
Q ss_pred c
Q psy9709 233 T 233 (500)
Q Consensus 233 s 233 (500)
+
T Consensus 75 ~ 75 (330)
T 2ivn_A 75 S 75 (330)
T ss_dssp E
T ss_pred E
Confidence 5
No 129
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=88.01 E-value=1.3 Score=43.86 Aligned_cols=30 Identities=13% Similarity=0.331 Sum_probs=24.1
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEee
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMD 55 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~ 55 (500)
|++|..|+||+|..|||..+.+++++...+
T Consensus 14 iLviN~GSSSlK~~l~~~~~~~~l~~G~~e 43 (391)
T 3r9p_A 14 VLVINSGSSSLKFQLVDPEFGVAASTGIVE 43 (391)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEC
T ss_pred EEEEecCchhheeEEEecCCCceEEEEEEe
Confidence 677999999999999997456777766543
No 130
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=87.96 E-value=1.3 Score=43.89 Aligned_cols=29 Identities=14% Similarity=0.371 Sum_probs=22.8
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHS 53 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~ 53 (500)
.|++|..|+||+|..|||..+.+++++..
T Consensus 24 ~ILviN~GSSS~K~~l~~~~~~~~l~~g~ 52 (398)
T 4ijn_A 24 TVLVVNSGSSSLKYAVVRPASGEFLADGI 52 (398)
T ss_dssp EEEEEEECSSCEEEEEECTTTCCEEEEEE
T ss_pred cEEEEeCCchhheEEEEECCCCceeeeee
Confidence 37779999999999999973445666654
No 131
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=87.93 E-value=2 Score=43.45 Aligned_cols=73 Identities=11% Similarity=0.077 Sum_probs=46.7
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeee--ecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSM--DISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~--~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
.+++||+|+|+.|+++++.. |. +...+. +.|... ..| ..+++++.+.+|+.+.+++.. .....-..|+.
T Consensus 60 ~~LAlDlGGTn~RV~~V~l~-g~-~~~~~~~~~ip~~~-~~g----~~~~LFd~Ia~~i~~fl~~~~--~~~~~lplGft 130 (445)
T 3hm8_A 60 DFLALDLGGTNFRVLLVRVT-TG-VQITSEIYSIPETV-AQG----SGQQLFDHIVDCIVDFQQKQG--LSGQSLPLGFT 130 (445)
T ss_dssp EEEEEEESSSSEEEEEEEES-SS-EEEEEEEECCCHHH-HTS----BHHHHHHHHHHHHHHHHHHHT--CTTCCCCEEEE
T ss_pred EEEEEEecCCeEEEEEEEEC-Cc-eEEEEEEeccCccc-cCC----CHHHHHHHHHHHHHHHHHHhC--cccccCcceEE
Confidence 57999999999999999985 65 322222 222211 011 457899999999999887631 11223345667
Q ss_pred EcCC
Q psy9709 232 ITNQ 235 (500)
Q Consensus 232 vs~~ 235 (500)
+|-+
T Consensus 131 FSFP 134 (445)
T 3hm8_A 131 FSFP 134 (445)
T ss_dssp ECSC
T ss_pred Eeee
Confidence 7654
No 132
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=87.61 E-value=0.61 Score=45.21 Aligned_cols=30 Identities=20% Similarity=0.175 Sum_probs=20.7
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeeee
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDIS 57 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~ 57 (500)
++|+|||+-|+|+++++. +|++ ...+.+.|
T Consensus 2 iiG~DIGGAn~K~a~~~~-~g~~-~~~~~~~P 31 (334)
T 3cet_A 2 ILGIDIGGANTKITELHE-NGEF-KVHHLYFP 31 (334)
T ss_dssp EEEEEEC--CEEEEEECS-TTCC-EEEEC---
T ss_pred eeEEEecccceeeeeecC-CCce-EEEEEecC
Confidence 567999999999999997 8987 55555555
No 133
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=87.00 E-value=0.54 Score=45.60 Aligned_cols=32 Identities=19% Similarity=0.200 Sum_probs=26.0
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeee
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDI 56 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~ 56 (500)
..+++||-||||.|+-++|. +|+++.+.+.+-
T Consensus 7 ~~~IavDWGTSnlRa~l~~~-~g~vl~~~~~~~ 38 (330)
T 3t69_A 7 GYYAAVDWGTSSFRLWIIGE-DGAVLAERRSAE 38 (330)
T ss_dssp -CEEEEEECSSCEEEEEECT-TSCEEEEEEESC
T ss_pred CCEEEEEecchheehheecC-CCCchhhhcCCc
Confidence 34556999999999999998 899999776543
No 134
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=85.38 E-value=1.1 Score=43.37 Aligned_cols=76 Identities=9% Similarity=0.097 Sum_probs=43.6
Q ss_pred EEEEEeccCCCceEEEEeCCCCeE--EEEeeeecccccCCCCeE---EEChHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEE--VVSHSMDISTISPQEGWA---EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 228 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~v--i~~~~~~~~~~~~~~g~~---~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~ 228 (500)
.+.+||+||+++|..+++..++.+ +...+..... ..+-. ..+ ++-.+...+++++..+.+...+ .++|.
T Consensus 13 ~~a~IDiGSns~rl~I~~~~~~~~~~i~~~k~~vrL---g~g~~~~g~ls-~eai~r~~~~L~~f~~~~~~~~--v~~i~ 86 (315)
T 1t6c_A 13 RVASIDIGSYSVRLTIAQIKDGKLSIILERGRITSL---GTKVKETGRLQ-EDRIEETIQVLKEYKKLIDEFK--VERVK 86 (315)
T ss_dssp EEEEEEECSSEEEEEEEEEETTEEEEEEEEEEECCT---TTTHHHHSSCC-HHHHHHHHHHHHHHHHHHHHTT--CSEEE
T ss_pred EEEEEEECcCcEEEEEEEEcCCcEEEEeeeeEEeec---CCCccccCCcC-HHHHHHHHHHHHHHHHHHHHCC--CCeEE
Confidence 477899999999999999764533 3333333221 11111 122 3344455567776666554443 35677
Q ss_pred EEEEcCC
Q psy9709 229 TLGITNQ 235 (500)
Q Consensus 229 ~I~vs~~ 235 (500)
+++.++.
T Consensus 87 ~vATsA~ 93 (315)
T 1t6c_A 87 AVATEAI 93 (315)
T ss_dssp EEECHHH
T ss_pred EEEcHHH
Confidence 7775543
No 135
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=84.87 E-value=0.99 Score=43.11 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=31.1
Q ss_pred cccCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccc
Q psy9709 149 QTQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTI 188 (500)
Q Consensus 149 ~~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~ 188 (500)
+.|+..+++||-||||.|+-++| + |+++...+.+-...
T Consensus 2 ~~m~~~~IavDWGTs~lRa~l~~-~-g~vl~~~~~~~Gv~ 39 (295)
T 3nuw_A 2 NAMTARYIAIDWGSTNLRAWLYQ-G-EECLESRQSEAGVT 39 (295)
T ss_dssp CGGGCEEEEEEECSSCEEEEEEE-T-TEEEEEEEESCCTT
T ss_pred CCCCccEEEEEecchheeeeeec-C-CceehhhcCCCchh
Confidence 45667899999999999999999 5 99998776665543
No 136
>3t69_A Putative 2-dehydro-3-deoxygalactonokinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.55A {Sinorhizobium meliloti}
Probab=84.02 E-value=0.89 Score=44.09 Aligned_cols=37 Identities=19% Similarity=0.155 Sum_probs=27.2
Q ss_pred cccCCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecc
Q psy9709 149 QTQVPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDIS 186 (500)
Q Consensus 149 ~~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~ 186 (500)
+.++..+|+||-||||.|+-++|.+ |++++..+.+-.
T Consensus 3 ~~~~~~~IavDWGTSnlRa~l~~~~-g~vl~~~~~~~G 39 (330)
T 3t69_A 3 MTTAGYYAAVDWGTSSFRLWIIGED-GAVLAERRSAEG 39 (330)
T ss_dssp -----CEEEEEECSSCEEEEEECTT-SCEEEEEEESCC
T ss_pred cCCCCCEEEEEecchheehheecCC-CCchhhhcCCcc
Confidence 4456778999999999999999975 999987655443
No 137
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=83.78 E-value=1.5 Score=42.92 Aligned_cols=77 Identities=16% Similarity=0.094 Sum_probs=43.7
Q ss_pred CEEEEEeccCCCceEEEEeCC-CCeE--EEEeeeecccccCCCCeE---EEChHHHHHHHHHHHHHHHHHHHhCCCCCCC
Q psy9709 153 PLIGVIDEGTRTVRFAIISAL-TQEE--VVSHSMDISTISPQEGWA---EQDPMEILQAVQTTMDRAIEKLSAHGLSRDD 226 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~-~G~v--i~~~~~~~~~~~~~~g~~---~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~ 226 (500)
..+.+||+||+|+|..+++.. +|.+ +...+.... . ..|-. ..+ ++-.+...+++++..+.+... ..++
T Consensus 16 ~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vr--L-g~g~~~~g~ls-~eai~r~~~aL~~f~~~~~~~--~v~~ 89 (343)
T 3cer_A 16 VTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIR--L-GQDVDKTHRFA-DEALERAYVAAREFAGVIAEH--PIDG 89 (343)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCC--T-TTTHHHHSSCC-HHHHHHHHHHHHHHHHHHTTS--CCSE
T ss_pred CeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEee--C-CCCccccCCcC-HHHHHHHHHHHHHHHHHHHHC--CCCe
Confidence 357899999999999999964 2433 333333222 1 11111 122 344455566777776665433 3456
Q ss_pred eeEEEEcCC
Q psy9709 227 IVTLGITNQ 235 (500)
Q Consensus 227 I~~I~vs~~ 235 (500)
|.+++.++.
T Consensus 90 v~~vATsA~ 98 (343)
T 3cer_A 90 LRFVATSAT 98 (343)
T ss_dssp EEEEECHHH
T ss_pred EEEEecHHH
Confidence 777765443
No 138
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=82.60 E-value=1.2 Score=46.31 Aligned_cols=79 Identities=11% Similarity=0.159 Sum_probs=47.7
Q ss_pred CEEEEEeccCCCceEEEEeCCCCe--EEEEeeeecccc--cCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCee
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQE--EVVSHSMDISTI--SPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIV 228 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~--vi~~~~~~~~~~--~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~ 228 (500)
..+.+||+||+|+|..+++...|. ++...+.+...- ....|. .++ +-.+...+|+++..+.+.. ...++|.
T Consensus 11 ~~~AaIDiGSNSirL~I~~~~~~~~~~l~~~k~~vrLg~g~~~~g~--Ls~-eai~r~~~~L~~f~~~~~~--~~v~~v~ 85 (513)
T 1u6z_A 11 QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNM--LSE-EAMTRGLNCLSLFAERLQG--FSPASVC 85 (513)
T ss_dssp -CEEEEEECSSCEEEEEEEEETTEEEEEEEEEECCCTGGGBCTTCC--BCH-HHHHHHHHHHHHHHHHTTT--CCGGGEE
T ss_pred CeEEEEEeccccEEEEEEEEcCCeeEEEEeeEEEEeccCcccccCC--cCH-HHHHHHHHHHHHHHHHHHh--CCCCEEE
Confidence 357899999999999999975453 344444433321 122232 333 4445556777777665533 3456788
Q ss_pred EEEEcCCC
Q psy9709 229 TLGITNQR 236 (500)
Q Consensus 229 ~I~vs~~~ 236 (500)
+++.++..
T Consensus 86 ~vATsA~R 93 (513)
T 1u6z_A 86 IVGTHTLR 93 (513)
T ss_dssp EEECHHHH
T ss_pred EEecHHHH
Confidence 88876654
No 139
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=82.41 E-value=2.1 Score=43.72 Aligned_cols=76 Identities=11% Similarity=0.140 Sum_probs=47.4
Q ss_pred CEEEEEeccCCCceEEEEeCCCCe-----EEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCC-CCC
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQE-----EVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLS-RDD 226 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~-----vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~-~~~ 226 (500)
--+|+||+|+|+.|+++++.. |. .+...+..+++ |+. ...-..+++++.+.+|+.+.+++ .+.. ..-
T Consensus 77 G~fLAlDlGGTNfRV~~V~L~-g~~~~~~~~~~~~~~~~I--p~~-l~~gt~~eLFd~IA~~i~~fl~~---~~~~~~~l 149 (470)
T 3f9m_A 77 GDFLSLDLGGTNFRVMLVKVG-EGEEGQWSVKTKHQMYSI--PED-AMTGTAEMLFDYISECISDFLDK---HQMKHKKL 149 (470)
T ss_dssp EEEEEEEESSSEEEEEEEEEE-C----CEEEEEEEEEEEC--CHH-HHSSBHHHHHHHHHHHHHHHHHH---TTCSSSCC
T ss_pred eEEEEEEecCceEEEEEEEEC-CCCCCcceEEEEEEeecC--ChH-hccCCHHHHHHHHHHHHHHHHhh---cccccccc
Confidence 357999999999999999975 43 34333333331 110 00124689999999999999875 2322 223
Q ss_pred eeEEEEcCC
Q psy9709 227 IVTLGITNQ 235 (500)
Q Consensus 227 I~~I~vs~~ 235 (500)
..|+.+|-+
T Consensus 150 pLGfTFSFP 158 (470)
T 3f9m_A 150 PLGFTFSFP 158 (470)
T ss_dssp EEEEEECSC
T ss_pred ceEEEEecc
Confidence 456666654
No 140
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=81.33 E-value=0.88 Score=46.49 Aligned_cols=81 Identities=14% Similarity=0.115 Sum_probs=46.0
Q ss_pred cEEEEEecCCCcceEEEEeCCCC-----cEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHH--HhCCCCCC
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQ-----EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKL--SAHGLSRD 96 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g-----~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~--~~~~~~~~ 96 (500)
.|+++||+|++++|..||+-..+ .++... .......+.-.-...+|+.+.+.+..+++...+.+ .+.+ ..
T Consensus 34 ~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~-~~~~~~~~Gls~~~~~pe~~~~~l~~Ll~~a~~~iP~~~~~--~t 110 (456)
T 3cj1_A 34 KYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQH-SSCDVQGGGISSYANDPSKAGQSLVRCLEQALRDVPRDRHA--ST 110 (456)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEE-EEEECSSSCGGGGTTSTHHHHHHTHHHHHHHHHHSCHHHHT--TC
T ss_pred eEEEEEEcCCCCeEEEEEEEcCCCCCCccceeee-eeeeecccccccccCCHHHHHHHHHHHHHHHHHhCCHHHcC--Cc
Confidence 46777999999999999985121 123221 11111112211122468888877777776654321 1122 34
Q ss_pred CeeEEEEcCCc
Q psy9709 97 DIVTLGITNQR 107 (500)
Q Consensus 97 ~i~~Igis~~~ 107 (500)
.|..++-+++|
T Consensus 111 ~v~~~ATAgmR 121 (456)
T 3cj1_A 111 PLYLGATAGMR 121 (456)
T ss_dssp EEEEEECHHHH
T ss_pred eEEEEeeHHHh
Confidence 58888888776
No 141
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=80.64 E-value=1.7 Score=41.53 Aligned_cols=32 Identities=19% Similarity=0.145 Sum_probs=25.7
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeee
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDIS 57 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~ 57 (500)
..+++||-||||.|+-++| +|+++.+.+.+--
T Consensus 6 ~~~IavDWGTs~lRa~l~~--~g~vl~~~~~~~G 37 (295)
T 3nuw_A 6 ARYIAIDWGSTNLRAWLYQ--GEECLESRQSEAG 37 (295)
T ss_dssp CEEEEEEECSSCEEEEEEE--TTEEEEEEEESCC
T ss_pred ccEEEEEecchheeeeeec--CCceehhhcCCCc
Confidence 3455699999999999999 4899988776543
No 142
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=79.48 E-value=2.6 Score=38.26 Aligned_cols=64 Identities=17% Similarity=0.291 Sum_probs=44.2
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
.+++||--+..+-++|++ +|+++..... .. .... +.+...+++++++ .+++..+|.+|+++
T Consensus 3 ~iLaIdTS~~~~svAl~~--~~~~~~~~~~-~~---------~~Hs----~~L~p~i~~~L~~---a~~~~~dld~Iav~ 63 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV--NDQVISRSEV-AP---------RDHT----KKVLPMVDEVLKE---AGLTLQDLDALAFG 63 (213)
T ss_dssp CEEEEECSSSEEEEEEES--SSCEEEEEEE-CC---------SCCH----HHHHHHHHHHHHT---TTCCTTTCSEEEEE
T ss_pred EEEEEEccCcceEEEEEE--CCEEEEEEEe-ch---------HHHH----HHHHHHHHHHHHH---cCCCHHHccEEEEe
Confidence 367799988899999998 4777765321 00 1112 2445677777776 88999999999988
Q ss_pred CCc
Q psy9709 105 NQR 107 (500)
Q Consensus 105 ~~~ 107 (500)
.--
T Consensus 64 ~GP 66 (213)
T 3r6m_A 64 RGP 66 (213)
T ss_dssp EES
T ss_pred cCC
Confidence 533
No 143
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=79.47 E-value=1.7 Score=42.76 Aligned_cols=30 Identities=30% Similarity=0.449 Sum_probs=24.4
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEe
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSM 54 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~ 54 (500)
.|++|..|+||+|..|||..+++++++...
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~~l~~G~~ 32 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQSLVTGLA 32 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCchhheEEEEecCCCceEEEEEE
Confidence 578899999999999999746677776654
No 144
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=78.54 E-value=2 Score=42.98 Aligned_cols=33 Identities=21% Similarity=0.456 Sum_probs=26.2
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeee
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDI 56 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~ 56 (500)
+.|++|..|+||+|..|||..+.+++++...+.
T Consensus 18 ~~ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 50 (415)
T 2e1z_A 18 PVVLVINCGSSSIKFSVLDVATCDVLMAGIADG 50 (415)
T ss_dssp CEEEEEEECSSEEEEEEEETTTCCEEEEEEEES
T ss_pred CeEEEEECCchhheEEEEECCCCCEEEEEEEEe
Confidence 357889999999999999964467787776554
No 145
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=77.91 E-value=10 Score=32.74 Aligned_cols=54 Identities=9% Similarity=0.263 Sum_probs=35.4
Q ss_pred EEEEEecCCCcceEEEEeCCCCc---E---EEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHH
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQE---E---VVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEK 87 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~---~---l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~ 87 (500)
.|+|||-|++.+=.+++|. +|+ . +......++ . ..+..+=+..+.+.+.+++++
T Consensus 2 rILGIDPGl~~tG~gvi~~-~g~~~~~~~~v~~G~I~t~-----~---~~~~~~RL~~I~~~l~~~i~~ 61 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV-EGKGALKARLLHGEVVKTS-----P---QEPAKERVGRIHARVLEVLHR 61 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE-CSSSSSCEEEEEEEEEECC-----T---TSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccccCceEEEEEEe-cCCccceEEEEEeCeEECC-----C---CCCHHHHHHHHHHHHHHHHHH
Confidence 4778999999999999998 775 2 333333332 1 234444555666777777765
No 146
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=77.73 E-value=2 Score=42.79 Aligned_cols=32 Identities=13% Similarity=0.294 Sum_probs=24.9
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeee
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDI 56 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~ 56 (500)
.|++|..|+||+|..|||..+.+++++...+.
T Consensus 2 ~ILviN~GSSS~K~~l~~~~~~~~l~~g~ie~ 33 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIEMEGEKVLCKGIAER 33 (403)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEEEC
T ss_pred eEEEEeCCchhheeEEEEcCCCcEEEEEEEEe
Confidence 37779999999999999963457777665543
No 147
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=77.56 E-value=2.4 Score=40.06 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=23.3
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeee
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDI 56 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~ 56 (500)
++.||+|-|++|.++||. +++++...+..+
T Consensus 25 ~L~IDiGNT~ik~g~~~~-~~~~~~~~r~~t 54 (271)
T 2f9w_A 25 ILELDCGNSLIKWRVIEG-AARSVAGGLAES 54 (271)
T ss_dssp EEEEEECSSCEEEEEEET-TTEEEEEEEESS
T ss_pred EEEEEeCCCeeEEEEEeC-CCEEEEEEEecC
Confidence 455999999999999995 567776665443
No 148
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=76.08 E-value=2.9 Score=43.30 Aligned_cols=78 Identities=15% Similarity=0.184 Sum_probs=45.6
Q ss_pred EEEEEeccCCCceEEEEeCCCC--eEEEEeeeeccccc--CCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQ--EEVVSHSMDISTIS--PQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 229 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G--~vi~~~~~~~~~~~--~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~ 229 (500)
.+.+||+||+|+|..+++..++ +++...+.....-. ...| ..++ +-.+...+|+++..+.+...+ .++|.+
T Consensus 16 ~~AaIDiGSNS~rL~I~~~~~~~~~~~~~~k~~vrLg~gl~~~g--~Ls~-eai~r~~~~L~~F~~~~~~~~--v~~v~~ 90 (508)
T 3hi0_A 16 PVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTG--RMHE-EGVTRALMALRRFHVLSEQAQ--AQKLYV 90 (508)
T ss_dssp CEEEEEECSSEEEEEEESCSSSSCCEEEEEEEECCTTTTHHHHS--SCCH-HHHHHHHHHHHHHHHHHHHTT--CSEEEE
T ss_pred eEEEEEECCccEEEEEEEEcCCCceEEEEEeEEeecccCccccC--CcCH-HHHHHHHHHHHHHHHHHHhCC--CCeEEE
Confidence 4678999999999999997644 34443333322110 0112 1233 344455567776665554444 467888
Q ss_pred EEEcCCC
Q psy9709 230 LGITNQR 236 (500)
Q Consensus 230 I~vs~~~ 236 (500)
++.++..
T Consensus 91 vATsA~R 97 (508)
T 3hi0_A 91 LATAAAR 97 (508)
T ss_dssp EECTHHH
T ss_pred EeeHHHH
Confidence 8876654
No 149
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=75.51 E-value=3 Score=43.21 Aligned_cols=55 Identities=27% Similarity=0.356 Sum_probs=36.5
Q ss_pred cEEEEEecCCCcceEEEEeCCCC--cEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHH
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQ--EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMD 82 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g--~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~ 82 (500)
.++.|||||+|++.+++=+..+| ++++....++.-.. | ..++.+...+++.++++
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGiK---G-t~~Ni~g~~~si~~a~~ 58 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGMK---G-TRDNIAGTLAALEQALA 58 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSST---T-SGGGHHHHHHHHHHHHT
T ss_pred cEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCccc---e-eeeCHHHHHHHHHHHHH
Confidence 47788999999999998664235 56888777765332 2 44566666555554444
No 150
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=75.49 E-value=1.6 Score=41.68 Aligned_cols=92 Identities=12% Similarity=-0.020 Sum_probs=49.1
Q ss_pred ceee-echhhhchhHHHHHHHHHcCCCCCHHHHHHHHHhcC-CCCCeEEeccCCCCCCCCCCCCCcEEEEc-----CCCC
Q psy9709 403 PIYA-LEGSIAVAGAAVKWLRDNLNLMDNVRETESLAEKVM-TTGDVYFVPAFGGLYAPYWRKDARGVICG-----MTQF 475 (500)
Q Consensus 403 ~~~~-~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~~~~~~-~~~~l~~~P~~~G~r~P~~~~~~~g~f~G-----l~~~ 475 (500)
+.|. +.++...+|..++=.+..++. .+++++.+++.+-. ..-++ .+-.+.|..-+....+.-++.|| ++.+
T Consensus 129 ~~f~r~~g~aaGgGtFl~l~a~ll~~-~~~~el~~lA~~g~~~~vDl-~v~DIy~~~~~~l~~~s~as~Fgk~~~l~~~g 206 (287)
T 2ews_A 129 QSQRRVGGIGTGGGMIQGLGYLLSQI-TDYKQLTDMAQHGDRNTIDL-KVRHIYKDTEPPIPGDLTAANFGHVLHHLDAD 206 (287)
T ss_dssp SCEEEEEEESCSHHHHHHHHHHHHCC-CCHHHHHHHHTTCCCTTTCE-ETTTC-------CCTTSEEETTTTGGGCTTSC
T ss_pred CceEEcCccccchhhHHHHHHHHhCC-CCHHHHHHHHHcCCcccccc-chhhhcCCCCCCcCcchhhHHHHHHHHHHhCC
Confidence 4565 445555667777666666652 47899998876432 11111 12222221111112233333223 2345
Q ss_pred CCHHHHHHHHHHHHHHHHHHH
Q psy9709 476 TTKGHIIRAALEAICFQTRDI 496 (500)
Q Consensus 476 ~~~~~l~rAv~Egia~~~~~~ 496 (500)
.+++|++++++..|+..+..+
T Consensus 207 ~~~eDIaasl~~sV~~~I~~l 227 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTM 227 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 689999999999998876544
No 151
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=74.94 E-value=10 Score=39.51 Aligned_cols=74 Identities=9% Similarity=0.217 Sum_probs=49.7
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCcc-ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWA-EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 102 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~-e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Ig 102 (500)
.+++|||-.+..+-++|++. ++++++....... .+..|-+ |.....-.+.+...+++++++ ++.++|.+|+
T Consensus 6 m~iL~i~ts~~~~~~al~~~-~~~~~~~~~~~~~--~~~gg~~p~~a~~~h~~~l~~~i~~~l~~-----~~~~~id~ia 77 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTS-DGEVLFNKTIMYK--PPKQGINPREAADHHAETFPKLIKEAFEV-----VDKNEIDLIA 77 (540)
T ss_dssp CEEEEEECSSSEEEEEEEET-TSCEEEEEEEECC--CCCSSSSCCCHHHHHHHHHHHHHHHHHHH-----SCGGGCCEEE
T ss_pred ceEEEEEcCccceEEEEEEC-CCeEEEEEEEeec--CCCCCCChHHHHHHHHHHHHHHHHHHHHh-----CCHhHCcEEE
Confidence 46888999888999999996 6688877654432 1222322 222345566667777777654 4677899998
Q ss_pred EcC
Q psy9709 103 ITN 105 (500)
Q Consensus 103 is~ 105 (500)
++.
T Consensus 78 ~~~ 80 (540)
T 3en9_A 78 FSQ 80 (540)
T ss_dssp EEE
T ss_pred Eec
Confidence 874
No 152
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=74.85 E-value=3.6 Score=40.49 Aligned_cols=81 Identities=16% Similarity=0.216 Sum_probs=53.2
Q ss_pred ccCcEEEEEecCCC--cceEEEEeCCCCc---EEEEEEeeeeeecC-------CCCccccCH-------HHHHHHHHHHH
Q psy9709 21 TQVPLIGVIDEGTR--TVRFAIISALTQE---EVVSHSMDISTISP-------QEGWAEQDP-------MEILQAVQTTM 81 (500)
Q Consensus 21 m~~~~i~giDiGtt--~~k~~v~d~~~g~---~l~~~~~~~~~~~~-------~~g~~e~d~-------~~~~~~~~~~i 81 (500)
|++.+++|+=-||| +|=+++++. +|+ ++...+.+|+.... .++ ..+. .++=+.+.+++
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~-~~~~~~~~~~~~~pyp~~lr~~l~~~~~~~--~~~~~~~~~l~~~lg~~~a~av 78 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDF-AGEQPQLIGTHTETIPTHLLKGLQRLCLPG--TDEINRLGRLDRSVGKLFALAV 78 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEEC-SSSSCEEEEEEEECCCHHHHHHHHGGGCTT--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEE-eCCeEEEEeeeeecCCHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 34455677999999 799999997 664 67777777752210 011 1111 12444555677
Q ss_pred HHHHHHHHhCCCCCCCeeEEEEcCCc
Q psy9709 82 DRAIEKLSAHGLSRDDIVTLGITNQR 107 (500)
Q Consensus 82 ~~~~~~~~~~~~~~~~i~~Igis~~~ 107 (500)
++++++ .++++++|.+||.-+|.
T Consensus 79 ~~~l~~---~~~~~~~i~~IGsHGQT 101 (370)
T 3cqy_A 79 NNLLAK---TKIAKDEIIAIGSHGQT 101 (370)
T ss_dssp HHHHHH---HCCCGGGEEEEEEEEEE
T ss_pred HHHHHH---cCCCcccccEEEeCCcc
Confidence 777766 88889999999988764
No 153
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=74.59 E-value=5.9 Score=38.87 Aligned_cols=76 Identities=16% Similarity=0.113 Sum_probs=41.1
Q ss_pred EEEEEecCCCcceEEEEeCC-C--CcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 25 LIGVIDEGTRTVRFAIISAL-T--QEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 101 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~-~--g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~I 101 (500)
++++||+|++++|..|++-. + .+.+......+....+.-+--..+|+.+-+.+. +..+ + ......+|.++
T Consensus 4 ~~avID~GSns~Rl~I~~~~~~~~~~~i~~~~~~~~k~~~gLs~~~~~~~~~~~~l~----~f~~-~--~~~~~~~v~~~ 76 (353)
T 3aap_A 4 CIAVIDAGSTGSRLHIYSYDTDDTNTPIHIEEIWNKKIKPGFASIQPNSVTIDAYLT----MLLA-D--APIHNIPVYFY 76 (353)
T ss_dssp EEEEEEECSSCEEEEEEEEEECTTSCEEEEEEEEEEEESSCGGGSCCSHHHHHHHHH----HHHT-T--CSCCSEEEEEE
T ss_pred EEEEEEcCCCCeEEEEEEEcCCCCCceeEeeeeeeeccCCChhhcCCCHHHHHHHHH----HHHH-H--HhcCCCcEEEE
Confidence 56779999999999999851 1 234443222111122222222234665554443 2222 1 33344568888
Q ss_pred EEcCCc
Q psy9709 102 GITNQR 107 (500)
Q Consensus 102 gis~~~ 107 (500)
+-+++|
T Consensus 77 ATaa~R 82 (353)
T 3aap_A 77 ATAGMR 82 (353)
T ss_dssp ECHHHH
T ss_pred ecHHHh
Confidence 888777
No 154
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=73.51 E-value=4.7 Score=43.84 Aligned_cols=29 Identities=21% Similarity=0.265 Sum_probs=25.2
Q ss_pred EEEEEecC-CCcceEEEEeCCCCcEEEEEEe
Q psy9709 25 LIGVIDEG-TRTVRFAIISALTQEEVVSHSM 54 (500)
Q Consensus 25 ~i~giDiG-tt~~k~~v~d~~~g~~l~~~~~ 54 (500)
.++|+|-| -|++|++++|. +|+++.....
T Consensus 330 ~vlg~dpg~r~g~k~a~vd~-~G~~l~~~~i 359 (785)
T 3bzc_A 330 ATLGLDPGLRTGVKVAVVDA-TGKLLDTATV 359 (785)
T ss_dssp CEEEEECCSSSCEEEEEECT-TSCEEEEEEE
T ss_pred eEEEECCCCcCceEEEEECC-CCCEEEEEEE
Confidence 47789999 69999999998 9999987654
No 155
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=72.93 E-value=2.3 Score=40.48 Aligned_cols=25 Identities=12% Similarity=0.166 Sum_probs=20.5
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVS 51 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~ 51 (500)
+.+|||+|+|.+|+++++ +++++..
T Consensus 21 ~~iGIDiGsTt~K~V~~~--~~~i~~~ 45 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQ--DNQRTFK 45 (287)
T ss_dssp CEEEEEECSSEEEEEEEC--SSCEEEE
T ss_pred eEEEEEEChhhEEEEEEc--CCEEEEE
Confidence 456699999999999995 5787755
No 156
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=72.88 E-value=4.5 Score=39.40 Aligned_cols=76 Identities=18% Similarity=0.211 Sum_probs=46.6
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeE-EEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWA-EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTL 230 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~-~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I 230 (500)
+.++||||..+..+-++|++ + ++++......+. .+..|.. +.....-.+.+...+++++++ ++++.++|.+|
T Consensus 5 ~M~iLgIdts~~~~svAl~~-~-~~i~~~~~~~~~--~~~gGv~p~~a~~~H~~~l~~~i~~~L~~---ag~~~~did~I 77 (334)
T 3eno_A 5 PMIVLGLEGTAHTISCGIID-E-SRILAMESSMYR--PKTGGIRPLDAAVHHSEVIDTVISRALEK---AKISIHDIDLI 77 (334)
T ss_dssp CCEEEEEECSSSEEEEEEEE-S-SCCCEEEEEECC--CSSCSCCHHHHHHHHHHHHHHHHHHHHHH---HTCCGGGCCEE
T ss_pred CceEEEEECCCcCeEEEEEE-C-CEEEEEEEEeec--cccCCcCcchHHHHHHHHHHHHHHHHHHH---cCCCHHHCCEE
Confidence 34799999888888999998 3 777765433322 1112321 111122333455566666654 47888899999
Q ss_pred EEcC
Q psy9709 231 GITN 234 (500)
Q Consensus 231 ~vs~ 234 (500)
+++.
T Consensus 78 av~~ 81 (334)
T 3eno_A 78 GFSM 81 (334)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9864
No 157
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=71.78 E-value=1.8 Score=43.30 Aligned_cols=21 Identities=14% Similarity=0.083 Sum_probs=17.2
Q ss_pred EEEEEecCCCcceEEEEeCCCCc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQE 47 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~ 47 (500)
+++|||+|||+++++++. +|+
T Consensus 14 ~vvGIDlGTt~s~va~~~--~g~ 34 (409)
T 4gni_A 14 VVIGITFGNSNSSIAHTV--DDK 34 (409)
T ss_dssp CEEEEEECSSEEEEEEEE--TTE
T ss_pred cEEEEEcCCCeEEEEEEe--CCc
Confidence 567799999999999984 454
No 158
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=71.48 E-value=2.6 Score=40.79 Aligned_cols=31 Identities=19% Similarity=0.126 Sum_probs=20.8
Q ss_pred EEEEeccCCCceEEEEeCCCCeEEEEeeeeccc
Q psy9709 155 IGVIDEGTRTVRFAIISALTQEEVVSHSMDIST 187 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~ 187 (500)
++|+|||+-++|+++++.+ |++ .....+.|.
T Consensus 2 iiG~DIGGAn~K~a~~~~~-g~~-~~~~~~~Pl 32 (334)
T 3cet_A 2 ILGIDIGGANTKITELHEN-GEF-KVHHLYFPM 32 (334)
T ss_dssp EEEEEEC--CEEEEEECST-TCC-EEEEC----
T ss_pred eeEEEecccceeeeeecCC-Cce-EEEEEecCC
Confidence 6899999999999998875 887 555555553
No 159
>3sk3_A Acetate kinase, acetokinase; actin-like ATPase domain, askha superfamily of phosphotransf acetokinase, ATP binding, phosphotransferase; HET: CIT; 1.90A {Salmonella enterica subsp} PDB: 3slc_A
Probab=70.63 E-value=5.2 Score=39.96 Aligned_cols=32 Identities=31% Similarity=0.542 Sum_probs=25.1
Q ss_pred cccCCEEEEEeccCCCceEEEEeCCCCeEEEE
Q psy9709 149 QTQVPLIGVIDEGTRTVRFAIISALTQEEVVS 180 (500)
Q Consensus 149 ~~~~~~~lgIDiGTts~k~~l~d~~~G~vi~~ 180 (500)
.|..+++|+|..|+||+|..|||.++++++..
T Consensus 15 ~Ms~klILviN~GSSS~K~~lf~~~~~~~l~~ 46 (415)
T 3sk3_A 15 HMSSKLVLVLNCGSSSLKFAIIDAVNGDEYLS 46 (415)
T ss_dssp ---CCEEEEEEECSSCEEEEEEETTTCCEEEE
T ss_pred cCCCCeEEEEeCchHhhhheeEECCCCCEEEE
Confidence 35567899999999999999999766777754
No 160
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=70.52 E-value=5.2 Score=37.69 Aligned_cols=32 Identities=16% Similarity=0.268 Sum_probs=23.5
Q ss_pred cCCEEEEEeccCCCceEEEEeCCCCeEEEEeee
Q psy9709 151 QVPLIGVIDEGTRTVRFAIISALTQEEVVSHSM 183 (500)
Q Consensus 151 ~~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~ 183 (500)
|....|.||+|.|++|..+||.+ ++++...+.
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~~-~~~~~~~r~ 52 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEGA-ARSVAGGLA 52 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEETT-TEEEEEEEE
T ss_pred ccCcEEEEEeCCCeeEEEEEeCC-CEEEEEEEe
Confidence 44567999999999999999942 677655543
No 161
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=70.37 E-value=1.7 Score=43.04 Aligned_cols=19 Identities=26% Similarity=0.205 Sum_probs=16.2
Q ss_pred EEEEEecCCCcceEEEEeC
Q psy9709 25 LIGVIDEGTRTVRFAIISA 43 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~ 43 (500)
.++|||+|||++++++++.
T Consensus 19 ~viGID~GTt~s~va~~~~ 37 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKN 37 (394)
T ss_dssp SCEEEEECSSEEEEEEECS
T ss_pred CEEEEEeCcCcEEEEEEEC
Confidence 4566999999999999874
No 162
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=69.22 E-value=1.3 Score=45.33 Aligned_cols=63 Identities=19% Similarity=0.218 Sum_probs=36.3
Q ss_pred ccccCCEEEEEeccCCCceEEEEeCCCCe-----EEEEe-eeecccccCCCCe--EEEChHHHHHHHHHHHHHHH
Q psy9709 148 IQTQVPLIGVIDEGTRTVRFAIISALTQE-----EVVSH-SMDISTISPQEGW--AEQDPMEILQAVQTTMDRAI 214 (500)
Q Consensus 148 ~~~~~~~~lgIDiGTts~k~~l~d~~~G~-----vi~~~-~~~~~~~~~~~g~--~~~d~~~~~~~i~~~l~~~~ 214 (500)
.....+|.++||+||+++|..|++...++ ++... .... . .+|. ...+++.+.+.+..+++.+.
T Consensus 29 ~~~~~~y~~vID~GSns~Rl~Vy~~~~~~~~~~~~~~~~~~~~~--~--~~Gls~~~~~pe~~~~~l~~Ll~~a~ 99 (456)
T 3cj1_A 29 EPPALKYGIVLDAGSSHTSMFVYKWPADKENDTGIVGQHSSCDV--Q--GGGISSYANDPSKAGQSLVRCLEQAL 99 (456)
T ss_dssp --CCEEEEEEEEECSSCEEEEEEEEETTSTTSTTCCEEEEEEEC--S--SSCGGGGTTSTHHHHHHTHHHHHHHH
T ss_pred CCCCceEEEEEEcCCCCeEEEEEEEcCCCCCCccceeeeeeeee--c--ccccccccCCHHHHHHHHHHHHHHHH
Confidence 33455688999999999999999854221 22211 1111 0 1121 11467888777776666554
No 163
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=68.98 E-value=13 Score=33.84 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=43.1
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
.+++||--+..+-++|++ +|+++.... ... .... +.+...+++++++ ++++..+|.+|+++
T Consensus 2 ~iL~idTs~~~~sval~~--~~~~~~~~~-~~~---------~~h~----~~l~~~i~~~L~~---a~~~~~did~Iav~ 62 (231)
T 2gel_A 2 RILAIDTATEACSVALWN--NGTINAHFE-LCP---------REHT----QRILPMVQEILAA---SGASLNEIDALAFG 62 (231)
T ss_dssp EEEEEECSSSEEEEEEEE--TTEEEEEEE-ECC---------SCCH----HHHHHHHHHHHHH---TTCCGGGCSEEEEE
T ss_pred eEEEEECCCcCeEEEEEE--CCEEEEEEh-hhh---------HHHH----HHHHHHHHHHHHH---cCCCHHHCCEEEEE
Confidence 478899888889999998 467664211 111 0112 2356677777777 89999999999997
Q ss_pred CC
Q psy9709 105 NQ 106 (500)
Q Consensus 105 ~~ 106 (500)
.-
T Consensus 63 ~G 64 (231)
T 2gel_A 63 RG 64 (231)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 164
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=68.45 E-value=2.2 Score=42.58 Aligned_cols=19 Identities=21% Similarity=0.053 Sum_probs=16.2
Q ss_pred EEEEEecCCCcceEEEEeC
Q psy9709 25 LIGVIDEGTRTVRFAIISA 43 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~ 43 (500)
.++|||+|||++++++++.
T Consensus 24 ~viGID~GTt~s~va~~~~ 42 (404)
T 3i33_A 24 PAIGIDLGTTYSCVGVFQH 42 (404)
T ss_dssp CCEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCccEEEEEEEC
Confidence 3566999999999999874
No 165
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=67.95 E-value=8.4 Score=34.94 Aligned_cols=67 Identities=7% Similarity=0.113 Sum_probs=45.6
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 104 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis 104 (500)
.|++||--+..+-++|++. ++++ ...... ...--+.+...+++++++ ++++..+|.+|+++
T Consensus 13 ~iLaidTS~~~~sval~~~--~~~l-~~~~~~-------------~r~Hse~L~p~i~~~L~~---a~~~~~dld~Iav~ 73 (218)
T 2a6a_A 13 MNVLALDTSQRIRIGLRKG--EDLF-EISYTG-------------EKKHAEILPVVVKKLLDE---LDLKVKDLDVVGVG 73 (218)
T ss_dssp CEEEEEECSSSEEEEEEET--TEEE-EEEEES-------------CGGGGGHHHHHHHHHHHH---HTCCGGGCSEEEEE
T ss_pred eEEEEEcCCcCeEEEEEEC--CEEE-EEEecc-------------hHHHHHHHHHHHHHHHHH---cCCCHHHCCEEEEE
Confidence 4788999999999999984 6777 322111 111223455667777766 78889999999998
Q ss_pred CCccee
Q psy9709 105 NQRETT 110 (500)
Q Consensus 105 ~~~~~~ 110 (500)
.--.++
T Consensus 74 ~GPGsf 79 (218)
T 2a6a_A 74 IGPGGL 79 (218)
T ss_dssp CCSSCH
T ss_pred cCCCch
Confidence 644333
No 166
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=67.56 E-value=6.5 Score=32.82 Aligned_cols=38 Identities=29% Similarity=0.467 Sum_probs=34.2
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcCCc
Q psy9709 67 EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 107 (500)
Q Consensus 67 e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~~~ 107 (500)
+-+++++++++.+.+++++++ .++++++|+.|-+|.+.
T Consensus 43 ~Nt~e~I~~At~ELl~eii~~---N~l~~eDIvSv~FTvT~ 80 (148)
T 1xho_A 43 DNTADEIVAETQKLLKEMAEK---NGLEEDDIISIIFTVTK 80 (148)
T ss_dssp SSSHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHH---cCCCHHHEEEEEEEeCC
Confidence 346899999999999999998 99999999999999765
No 167
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=65.50 E-value=7 Score=33.19 Aligned_cols=24 Identities=25% Similarity=0.169 Sum_probs=20.8
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEV 49 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l 49 (500)
.++|||.|+..|..++.|. .|.+.
T Consensus 4 riLGiDpG~~riGvAv~d~-~g~~a 27 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE-MGWTA 27 (150)
T ss_dssp EEEEEEECSSEEEEEEECT-TSSSE
T ss_pred EEEEEEccCCEEEEEEEEC-CCCEE
Confidence 4778999999999999998 78764
No 168
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=64.55 E-value=5.6 Score=41.24 Aligned_cols=55 Identities=27% Similarity=0.363 Sum_probs=34.7
Q ss_pred CEEEEEeccCCCceEEEEeCCCC--eEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHH
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQ--EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMD 211 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G--~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~ 211 (500)
+|+.|||||+|++.+++-+..+| ++++....++.=+ .| ..+|.+...+++.++++
T Consensus 2 ~~i~GiDIGnsttev~l~~~~~g~i~~l~~g~~~ttGi---KG-t~~Ni~g~~~si~~a~~ 58 (607)
T 1nbw_A 2 PLIAGIDIGNATTEVALASDYPQARAFVASGIVATTGM---KG-TRDNIAGTLAALEQALA 58 (607)
T ss_dssp CEEEEEEECSSEEEEEEEECBTTBCCCCEEEEEECCSS---TT-SGGGHHHHHHHHHHHHT
T ss_pred cEEEEEEecCceEEEEEEEEcCCeEEEEEeecccCCcc---ce-eeeCHHHHHHHHHHHHH
Confidence 68999999999999998775545 4466655554321 12 24566655555554443
No 169
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=63.64 E-value=3.6 Score=41.07 Aligned_cols=26 Identities=12% Similarity=-0.031 Sum_probs=19.3
Q ss_pred ccCCEEEEEeccCCCceEEEEeCCCCeE
Q psy9709 150 TQVPLIGVIDEGTRTVRFAIISALTQEE 177 (500)
Q Consensus 150 ~~~~~~lgIDiGTts~k~~l~d~~~G~v 177 (500)
.|..+++|||+|||+++++++. + |++
T Consensus 10 ~m~~~vvGIDlGTt~s~va~~~-~-g~~ 35 (409)
T 4gni_A 10 PGERVVIGITFGNSNSSIAHTV-D-DKA 35 (409)
T ss_dssp ---CCEEEEEECSSEEEEEEEE-T-TEE
T ss_pred CCCCcEEEEEcCCCeEEEEEEe-C-Cce
Confidence 3556899999999999999984 3 643
No 170
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=63.27 E-value=8.8 Score=43.04 Aligned_cols=30 Identities=10% Similarity=0.134 Sum_probs=24.8
Q ss_pred cEEEEEecCC-----CcceEEEEeCCCCcEEEEEEe
Q psy9709 24 PLIGVIDEGT-----RTVRFAIISALTQEEVVSHSM 54 (500)
Q Consensus 24 ~~i~giDiGt-----t~~k~~v~d~~~g~~l~~~~~ 54 (500)
+.|+|+|-|- |++|++++|. +|+++.....
T Consensus 519 ~~VlaldpG~~~~~~~g~k~a~vd~-~G~~l~~~~i 553 (1030)
T 3psf_A 519 PKILSLTCGQGRFGADAIIAVYVNR-KGDFIRDYKI 553 (1030)
T ss_dssp CCEEEEECTTCCTTTSCEEEEEECT-TSCEEEEEEE
T ss_pred CeEEEecCCCCCCCCCCeEEEEECC-CCCEEEEEEE
Confidence 3577799984 4899999998 9999987765
No 171
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=62.31 E-value=14 Score=36.48 Aligned_cols=28 Identities=14% Similarity=0.304 Sum_probs=23.4
Q ss_pred EEEEeccCCCceEEEEeCCCCeEEEEee
Q psy9709 155 IGVIDEGTRTVRFAIISALTQEEVVSHS 182 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~~~G~vi~~~~ 182 (500)
+|+|..|+||+|..|||.++++++....
T Consensus 14 iLviN~GSSSlK~~l~~~~~~~~l~~G~ 41 (391)
T 3r9p_A 14 VLVINSGSSSLKFQLVDPEFGVAASTGI 41 (391)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEE
T ss_pred EEEEecCchhheeEEEecCCCceEEEEE
Confidence 7899999999999999987677775543
No 172
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=61.52 E-value=21 Score=35.33 Aligned_cols=27 Identities=15% Similarity=0.437 Sum_probs=22.3
Q ss_pred EEEEeccCCCceEEEEeCCCCeEEEEe
Q psy9709 155 IGVIDEGTRTVRFAIISALTQEEVVSH 181 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~~~G~vi~~~ 181 (500)
+|+|..|+||+|..|||.++.+++...
T Consensus 25 ILviN~GSSS~K~~l~~~~~~~~l~~g 51 (398)
T 4ijn_A 25 VLVVNSGSSSLKYAVVRPASGEFLADG 51 (398)
T ss_dssp EEEEEECSSCEEEEEECTTTCCEEEEE
T ss_pred EEEEeCCchhheEEEEECCCCceeeee
Confidence 789999999999999997655566544
No 173
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=61.34 E-value=33 Score=29.22 Aligned_cols=53 Identities=19% Similarity=0.267 Sum_probs=33.7
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEE---EEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHH
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEV---VSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEK 87 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l---~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~ 87 (500)
.|+|||-|++++=.++++. +|+.+ ......++ . .+..+=+..+.+.+.+++++
T Consensus 2 ~ILGIDPGl~~tG~gvi~~-~g~~~~~v~~G~i~t~-----~----~~~~~Rl~~i~~~l~~~i~~ 57 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIRQ-VGRQLSYLGSGCIRTK-----V----DDLPSRLKLIYAGVTEIITQ 57 (158)
T ss_dssp EEEEEECCSSEEEEEEEEE-ETTEEEEEEEEEEECC-----C----SCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCCeeEEEEEe-cCCeEEEEEeeEEECC-----C----CCHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999997 67633 33333332 1 13333345666666777766
No 174
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=61.02 E-value=8.2 Score=31.52 Aligned_cols=38 Identities=21% Similarity=0.372 Sum_probs=34.0
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcCCc
Q psy9709 67 EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQR 107 (500)
Q Consensus 67 e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~~~ 107 (500)
+-+++++++++.+.+++++++ .++++++|..|-+|.+.
T Consensus 14 ~Nt~e~I~~at~eLl~~i~~~---N~l~~~dIvSv~FT~T~ 51 (127)
T 1dbf_A 14 RDTEEEILQKTKQLLEKIIEE---NHTKPEDVVQMLLSATP 51 (127)
T ss_dssp SCCHHHHHHHHHHHHHHHHHH---HCCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHH---cCCCHHHEEEEEEEeCC
Confidence 346899999999999999998 89999999999999765
No 175
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=60.98 E-value=5.8 Score=40.27 Aligned_cols=81 Identities=16% Similarity=0.121 Sum_probs=43.4
Q ss_pred cEEEEEecCCCcceEEEEeCCCC-----cEEEEEEeeeeeecCCCCc--cccCHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQ-----EEVVSHSMDISTISPQEGW--AEQDPMEILQAVQTTMDRAIEKLSAHGLSRD 96 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g-----~~l~~~~~~~~~~~~~~g~--~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~ 96 (500)
.|.++||+|+|++|+.||.-... .++.. ..... . ..+|- ...+|+...+.+..+++.+.+.+........
T Consensus 34 ~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~-~~~~k-~-~gpGlSs~~~~p~~~~~~l~~Ll~~a~~~vp~~~~~~t 110 (452)
T 3zx3_A 34 KYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQ-LEECQ-V-KGPGISKYAQKTDEIAAYLAECMKMSTERIPASKQHQT 110 (452)
T ss_dssp EEEEEEEECSSCEEEEEEEEECCCTTCCCCCEE-EEEEE-C-SSSCGGGGTTCGGGHHHHHHHHHHHHHHHSCHHHHTTC
T ss_pred eEEEEEEcCCCCcEEEEEEEeCCcCCCccccce-eeeec-c-cCCChhccCCCHHHHHHHHHHHHHHHHHhCCHHHcCCc
Confidence 46666999999999999985111 12211 11111 1 12331 2237888888777777766543110111123
Q ss_pred CeeEEEEcCCc
Q psy9709 97 DIVTLGITNQR 107 (500)
Q Consensus 97 ~i~~Igis~~~ 107 (500)
.|...+-.++|
T Consensus 111 pi~~~ATAgmR 121 (452)
T 3zx3_A 111 PVYLGATAGMR 121 (452)
T ss_dssp EEEEEECHHHH
T ss_pred cEEEEeeHHHh
Confidence 46666666655
No 176
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=60.97 E-value=10 Score=37.70 Aligned_cols=30 Identities=13% Similarity=0.310 Sum_probs=23.8
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeee
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSM 183 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~ 183 (500)
.+|+|..|+||+|..+||.++.+++.....
T Consensus 2 ~ILviN~GSSS~K~~l~~~~~~~~l~~g~i 31 (403)
T 2iir_A 2 RVLVINSGSSSIKYQLIEMEGEKVLCKGIA 31 (403)
T ss_dssp EEEEEEEETTEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEeCCchhheeEEEEcCCCcEEEEEEE
Confidence 378999999999999999765666654433
No 177
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=59.24 E-value=1.8 Score=43.93 Aligned_cols=65 Identities=18% Similarity=0.160 Sum_probs=36.9
Q ss_pred ccccCCEEEEEeccCCCceEEEEeCCCCe-----EEEEeeeecccccCCCCe--EEEChHHHHHHHHHHHHHHHH
Q psy9709 148 IQTQVPLIGVIDEGTRTVRFAIISALTQE-----EVVSHSMDISTISPQEGW--AEQDPMEILQAVQTTMDRAIE 215 (500)
Q Consensus 148 ~~~~~~~~lgIDiGTts~k~~l~d~~~G~-----vi~~~~~~~~~~~~~~g~--~~~d~~~~~~~i~~~l~~~~~ 215 (500)
.....+|.+.||+|+|++|+.||.-...+ ++... .... + ..+|- ...+|+...+.+..+++.+.+
T Consensus 29 ~~~~~~y~iviDaGSsgtRl~VY~~~~~~~~~~~~~~~~-~~~k-~-~gpGlSs~~~~p~~~~~~l~~Ll~~a~~ 100 (452)
T 3zx3_A 29 LPENVKYGIVLDAGSSHTNLYIYKWPAEKENDTGVVQQL-EECQ-V-KGPGISKYAQKTDEIAAYLAECMKMSTE 100 (452)
T ss_dssp ---CEEEEEEEEECSSCEEEEEEEEECCCTTCCCCCEEE-EEEE-C-SSSCGGGGTTCGGGHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEEcCCCCcEEEEEEEeCCcCCCcccccee-eeec-c-cCCChhccCCCHHHHHHHHHHHHHHHHH
Confidence 34455688899999999999999863211 22111 0000 1 11331 123788887777777776554
No 178
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=58.54 E-value=25 Score=31.62 Aligned_cols=62 Identities=18% Similarity=0.315 Sum_probs=40.3
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
.+|+||.-|..+-+++++ + |+++...... + .+..+.+. ..+++++++ .+++..+|.+|+++
T Consensus 3 ~iLaIdTS~~~~svAl~~-~-~~~~~~~~~~-~---------~~Hs~~L~----p~i~~~L~~---a~~~~~dld~Iav~ 63 (213)
T 3r6m_A 3 KILAIDTATENCSVALLV-N-DQVISRSEVA-P---------RDHTKKVL----PMVDEVLKE---AGLTLQDLDALAFG 63 (213)
T ss_dssp CEEEEECSSSEEEEEEES-S-SCEEEEEEEC-C---------SCCHHHHH----HHHHHHHHT---TTCCTTTCSEEEEE
T ss_pred EEEEEEccCcceEEEEEE-C-CEEEEEEEec-h---------HHHHHHHH----HHHHHHHHH---cCCCHHHccEEEEe
Confidence 379999988888999998 3 8887653110 0 12333333 444555543 57888899999986
Q ss_pred C
Q psy9709 234 N 234 (500)
Q Consensus 234 ~ 234 (500)
.
T Consensus 64 ~ 64 (213)
T 3r6m_A 64 R 64 (213)
T ss_dssp E
T ss_pred c
Confidence 3
No 179
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=58.33 E-value=4.5 Score=42.37 Aligned_cols=25 Identities=16% Similarity=0.137 Sum_probs=20.1
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCe
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQE 176 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~ 176 (500)
...++.+|+|+..+-+.++...+|.
T Consensus 192 ~~~vlV~D~GgGT~Dvsv~~~~~g~ 216 (554)
T 1yuw_A 192 ERNVLIFDLGGGTFDVSILTIAAGI 216 (554)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTE
T ss_pred CcEEEEEEcCCCeEEEEEEEEcCCc
Confidence 4578999999999999999864353
No 180
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=58.04 E-value=15 Score=36.14 Aligned_cols=77 Identities=13% Similarity=0.153 Sum_probs=50.4
Q ss_pred EEEEEecCCC--cceEEEEeCCCC--cEEEEEEeeeeeec-------CCCCccccCH-------HHHHHHHHHHHHHHHH
Q psy9709 25 LIGVIDEGTR--TVRFAIISALTQ--EEVVSHSMDISTIS-------PQEGWAEQDP-------MEILQAVQTTMDRAIE 86 (500)
Q Consensus 25 ~i~giDiGtt--~~k~~v~d~~~g--~~l~~~~~~~~~~~-------~~~g~~e~d~-------~~~~~~~~~~i~~~~~ 86 (500)
+++|+=-||| +|-+++++. +| +++...+.+|+... -.++ ..++ .++=+.+.++++++++
T Consensus 3 ~~IGlMSGTSlDGID~alv~~-~~~~~l~~~~~~py~~~lr~~l~~~~~~~--~~~~~~~~~l~~~lg~~~a~av~~~l~ 79 (371)
T 3qbx_A 3 RYLGLMSGTSLDGMDIVLIEQ-GDRTTLLASHYLPMPAGLREDILALCVPG--PDEIARAAEVEQRWVALAAQGVRELLL 79 (371)
T ss_dssp EEEEEECCSSCSEEEEEEEEE-SSSEEEEEEEEEECCHHHHHHHHHTTSCC--BTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecccChhhhhEEEEEe-cCCceecceeeecCCHHHHHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666999998 788899887 56 56666677775211 0011 0111 1234455566777776
Q ss_pred HHHhCCCCCCCeeEEEEcCCc
Q psy9709 87 KLSAHGLSRDDIVTLGITNQR 107 (500)
Q Consensus 87 ~~~~~~~~~~~i~~Igis~~~ 107 (500)
+ .++++++|.+||.-+|.
T Consensus 80 ~---~~~~~~~Id~IGsHGQT 97 (371)
T 3qbx_A 80 Q---QQMSPDEVRAIGSHGQT 97 (371)
T ss_dssp H---TTCCGGGCCEEEECCEE
T ss_pred H---cCCCcccccEEEeCCcc
Confidence 6 89999999999887763
No 181
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=57.50 E-value=27 Score=31.73 Aligned_cols=62 Identities=15% Similarity=0.171 Sum_probs=39.6
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEc
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGIT 233 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs 233 (500)
.+|+||.-+..+-+++++ + |+++..... .. ....+. +...+++++++ .+++..+|.+|+++
T Consensus 2 ~iL~idTs~~~~sval~~-~-~~~~~~~~~-~~---------~~h~~~----l~~~i~~~L~~---a~~~~~did~Iav~ 62 (231)
T 2gel_A 2 RILAIDTATEACSVALWN-N-GTINAHFEL-CP---------REHTQR----ILPMVQEILAA---SGASLNEIDALAFG 62 (231)
T ss_dssp EEEEEECSSSEEEEEEEE-T-TEEEEEEEE-CC---------SCCHHH----HHHHHHHHHHH---TTCCGGGCSEEEEE
T ss_pred eEEEEECCCcCeEEEEEE-C-CEEEEEEhh-hh---------HHHHHH----HHHHHHHHHHH---cCCCHHHCCEEEEE
Confidence 589999888888899998 3 776642111 10 122333 34444555543 57888899999986
Q ss_pred C
Q psy9709 234 N 234 (500)
Q Consensus 234 ~ 234 (500)
.
T Consensus 63 ~ 63 (231)
T 2gel_A 63 R 63 (231)
T ss_dssp C
T ss_pred c
Confidence 4
No 182
>1ufy_A Chorismate mutase; shikimate pathway, mutant, riken structur genomics/proteomics initiative, RSGI, structural genomics,; HET: MES; 0.96A {Thermus thermophilus} SCOP: d.79.1.2 PDB: 1ode_A* 1ui9_A*
Probab=57.12 E-value=11 Score=30.59 Aligned_cols=38 Identities=21% Similarity=0.376 Sum_probs=33.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHhCCCCC-CCeeEEEEcCCc
Q psy9709 67 EQDPMEILQAVQTTMDRAIEKLSAHGLSR-DDIVTLGITNQR 107 (500)
Q Consensus 67 e~d~~~~~~~~~~~i~~~~~~~~~~~~~~-~~i~~Igis~~~ 107 (500)
+-+++++++++.+.+++++++ .++++ ++|..|-+|.+.
T Consensus 13 ~n~~e~I~~at~eLl~~i~~~---N~l~~~~divSv~FT~T~ 51 (122)
T 1ufy_A 13 EDTPEAIHQATRELLLKMLEA---NGIQSYEELAAVIFTVTE 51 (122)
T ss_dssp SSSHHHHHHHHHHHHHHHHHH---HTCCCGGGEEEEEEEECT
T ss_pred CCCHHHHHHHHHHHHHHHHHh---cCCCChHhEEEEEEEeCC
Confidence 346899999999999999998 88999 999999999765
No 183
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=55.96 E-value=25 Score=36.37 Aligned_cols=67 Identities=19% Similarity=0.233 Sum_probs=38.7
Q ss_pred cEEEEEecCCCcceEEEEeCC-CC--cEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 24 PLIGVIDEGTRTVRFAIISAL-TQ--EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 100 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~-~g--~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~ 100 (500)
.+|.|||||-+++-+++-+.. +| +.+.+...++.-.. | ..++..-+ ..++++++++ .+.+.+++.-
T Consensus 2 ~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~ttg~k---g-t~~n~~g~----~~~l~~~~~~---~~~~~~~~~l 70 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITHSALAETTGIK---G-TLRNVFGI----QEALALVARG---AGIAVSDISL 70 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECCSST---T-STTHHHHH----HHHHHHHHHH---HTCCGGGEEE
T ss_pred cEEEEEecCCcchheeeeeecCCCceEEeeccccccCCcc---C-cHHHHHHH----HHHHHHHHHH---cCCChhhcee
Confidence 478889999888887764431 35 55666666654332 2 23344444 4455555555 5666666554
Q ss_pred E
Q psy9709 101 L 101 (500)
Q Consensus 101 I 101 (500)
|
T Consensus 71 i 71 (610)
T 2d0o_A 71 I 71 (610)
T ss_dssp E
T ss_pred e
Confidence 3
No 184
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=54.15 E-value=14 Score=37.07 Aligned_cols=31 Identities=10% Similarity=0.173 Sum_probs=25.0
Q ss_pred cEEEEEecCCCcceEEEEeCCCCcEEEEEEe
Q psy9709 24 PLIGVIDEGTRTVRFAIISALTQEEVVSHSM 54 (500)
Q Consensus 24 ~~i~giDiGtt~~k~~v~d~~~g~~l~~~~~ 54 (500)
..|++|..|+||+|..|||..+.+++++...
T Consensus 6 ~~ILviNaGSSSlKf~L~~~~~~~~l~~G~v 36 (438)
T 4h0p_A 6 EYLLAINCGSSSIKGKLFAIPSFELLANLAV 36 (438)
T ss_dssp EEEEEEEECSSCEEEEEEEETTTEEEEEEEE
T ss_pred CEEEEEECCcccceeEEEEcCCCCeeeEEEE
Confidence 4688899999999999999646677776543
No 185
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=53.76 E-value=14 Score=36.75 Aligned_cols=31 Identities=13% Similarity=0.341 Sum_probs=24.6
Q ss_pred EEEEecCCCcceEEEEeCCCCcEEEEEEeee
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEVVSHSMDI 56 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l~~~~~~~ 56 (500)
|++|..|+||+|..|||..+.+++++...+.
T Consensus 3 ILviN~GSSS~K~~lf~~~~~~~l~~g~ie~ 33 (408)
T 1g99_A 3 VLVINAGSSSLKYQLIDMTNESALAVGLCER 33 (408)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEES
T ss_pred EEEEECCchhheeEEEEcCCCcEEEEEEEEe
Confidence 6779999999999999963457777665544
No 186
>3bzc_A TEX; helix-turn-helix, helix-hairpin-helix, S1 domain, YQGF domain, transcription, RNA binding protein; 2.27A {Pseudomonas aeruginosa} SCOP: a.60.2.6 a.60.2.6 a.294.1.1 b.40.4.5 c.55.3.13 PDB: 3bzk_A 2oce_A
Probab=53.63 E-value=19 Score=39.22 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=26.4
Q ss_pred cCCEEEEEecc-CCCceEEEEeCCCCeEEEEeee
Q psy9709 151 QVPLIGVIDEG-TRTVRFAIISALTQEEVVSHSM 183 (500)
Q Consensus 151 ~~~~~lgIDiG-Tts~k~~l~d~~~G~vi~~~~~ 183 (500)
..+.++|+|-| .+.+|++++|. +|+++.....
T Consensus 327 ~~~~vlg~dpg~r~g~k~a~vd~-~G~~l~~~~i 359 (785)
T 3bzc_A 327 GPRATLGLDPGLRTGVKVAVVDA-TGKLLDTATV 359 (785)
T ss_dssp CSCCEEEEECCSSSCEEEEEECT-TSCEEEEEEE
T ss_pred CCCeEEEECCCCcCceEEEEECC-CCCEEEEEEE
Confidence 35568999999 68999999998 4999986643
No 187
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=52.13 E-value=17 Score=41.50 Aligned_cols=30 Identities=10% Similarity=0.134 Sum_probs=24.9
Q ss_pred cEEEEEecCC-----CcceEEEEeCCCCcEEEEEEe
Q psy9709 24 PLIGVIDEGT-----RTVRFAIISALTQEEVVSHSM 54 (500)
Q Consensus 24 ~~i~giDiGt-----t~~k~~v~d~~~g~~l~~~~~ 54 (500)
+.|+|+|-|- |++|++++|. +|+++.....
T Consensus 516 ~~VlaldpG~r~~g~~g~k~a~vD~-~G~vl~~~~i 550 (1219)
T 3psi_A 516 PKILSLTCGQGRFGADAIIAVYVNR-KGDFIRDYKI 550 (1219)
T ss_dssp CCEEEEECTTCCTTTTCEEEEEECT-TSCEEEEEEE
T ss_pred CeEEEecCCCCCCCCCceEEEEECC-CCCEEEEEEE
Confidence 4577799984 3899999998 9999987665
No 188
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=50.97 E-value=6.2 Score=38.91 Aligned_cols=19 Identities=26% Similarity=0.183 Sum_probs=17.2
Q ss_pred CEEEEEeccCCCceEEEEe
Q psy9709 153 PLIGVIDEGTRTVRFAIIS 171 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d 171 (500)
..++|||+|||++++++++
T Consensus 18 ~~viGID~GTt~s~va~~~ 36 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMK 36 (394)
T ss_dssp CSCEEEEECSSEEEEEEEC
T ss_pred CCEEEEEeCcCcEEEEEEE
Confidence 4679999999999999987
No 189
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=50.42 E-value=6.7 Score=42.10 Aligned_cols=25 Identities=12% Similarity=0.262 Sum_probs=20.2
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCe
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQE 176 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~ 176 (500)
...++.+|+|+..+-+.++....|.
T Consensus 196 ~~~vlV~DlGGGT~Dvsv~~~~~g~ 220 (675)
T 3d2f_A 196 PRIVAFVDIGHSSYTCSIMAFKKGQ 220 (675)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTE
T ss_pred CcEEEEEEcCCCcEEEEEEEecCCe
Confidence 4568999999999999999864454
No 190
>4h0p_A Acetate kinase; askha (acetate and sugar kinas actin) superfamily, ribonuclease H-like fold, transferase; 1.89A {Cryptococcus neoformans}
Probab=50.19 E-value=18 Score=36.26 Aligned_cols=30 Identities=10% Similarity=0.150 Sum_probs=24.8
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEe
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSH 181 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~ 181 (500)
++.+|+|..|+||+|..|||.++.+++...
T Consensus 5 ~~~ILviNaGSSSlKf~L~~~~~~~~l~~G 34 (438)
T 4h0p_A 5 AEYLLAINCGSSSIKGKLFAIPSFELLANL 34 (438)
T ss_dssp CEEEEEEEECSSCEEEEEEEETTTEEEEEE
T ss_pred CCEEEEEECCcccceeEEEEcCCCCeeeEE
Confidence 457899999999999999998767777543
No 191
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=49.54 E-value=34 Score=35.42 Aligned_cols=74 Identities=9% Similarity=0.199 Sum_probs=45.4
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeE-EEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWA-EQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~-~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
.++||||..+..+-+++++.+ ++++........ .+..|.. +.....-.+.+...+++++++ ++.++|.+|+
T Consensus 6 m~iL~i~ts~~~~~~al~~~~-~~~~~~~~~~~~--~~~gg~~p~~a~~~h~~~l~~~i~~~l~~-----~~~~~id~ia 77 (540)
T 3en9_A 6 MICLGLEGTAEKTGVGIVTSD-GEVLFNKTIMYK--PPKQGINPREAADHHAETFPKLIKEAFEV-----VDKNEIDLIA 77 (540)
T ss_dssp CEEEEEECSSSEEEEEEEETT-SCEEEEEEEECC--CCCSSSSCCCHHHHHHHHHHHHHHHHHHH-----SCGGGCCEEE
T ss_pred ceEEEEEcCccceEEEEEECC-CeEEEEEEEeec--CCCCCCChHHHHHHHHHHHHHHHHHHHHh-----CCHhHCcEEE
Confidence 479999998888999999953 578866544332 1112221 322334445555566666553 3456788888
Q ss_pred EcC
Q psy9709 232 ITN 234 (500)
Q Consensus 232 vs~ 234 (500)
++.
T Consensus 78 ~~~ 80 (540)
T 3en9_A 78 FSQ 80 (540)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 192
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=49.16 E-value=23 Score=34.85 Aligned_cols=28 Identities=32% Similarity=0.514 Sum_probs=23.7
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEe
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSH 181 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~ 181 (500)
.+|+|..|+||+|..|||.++++++...
T Consensus 3 ~iLviN~GSSSlK~~l~~~~~~~~l~~G 30 (384)
T 3khy_A 3 EILVLNCGSSSVKFALINPHTSQSLVTG 30 (384)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEEECCchhheEEEEecCCCceEEEE
Confidence 6899999999999999998767777544
No 193
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=48.62 E-value=34 Score=33.50 Aligned_cols=81 Identities=15% Similarity=0.198 Sum_probs=51.0
Q ss_pred ccCCEEEEEeccCC--CceEEEEeCCCC---eEEEEeeeecccccC-------CCCeEEEChHHHH-------HHHHHHH
Q psy9709 150 TQVPLIGVIDEGTR--TVRFAIISALTQ---EEVVSHSMDISTISP-------QEGWAEQDPMEIL-------QAVQTTM 210 (500)
Q Consensus 150 ~~~~~~lgIDiGTt--s~k~~l~d~~~G---~vi~~~~~~~~~~~~-------~~g~~~~d~~~~~-------~~i~~~l 210 (500)
|++.++||+=.||| .+-+++++.+ | +++...+.+|+.... +++ ..+.+++- +...+++
T Consensus 2 ~~~~~~iGlMSGTSlDGiD~alv~~~-~~~~~~~~~~~~pyp~~lr~~l~~~~~~~--~~~~~~~~~l~~~lg~~~a~av 78 (370)
T 3cqy_A 2 MNKAYYIGLMSGTSMDGVDAVLVDFA-GEQPQLIGTHTETIPTHLLKGLQRLCLPG--TDEINRLGRLDRSVGKLFALAV 78 (370)
T ss_dssp TTCCEEEEEEECTTCCCEEEEEEECS-SSSCEEEEEEEECCCHHHHHHHHGGGCTT--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecccchhhHeEEEEEEe-CCeEEEEeeeeecCCHHHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 34467899999999 7888999975 5 467777888774311 111 01111221 1223455
Q ss_pred HHHHHHHHhCCCCCCCeeEEEEcCCC
Q psy9709 211 DRAIEKLSAHGLSRDDIVTLGITNQR 236 (500)
Q Consensus 211 ~~~~~~~~~~~~~~~~I~~I~vs~~~ 236 (500)
++++++ .++++++|.+||..+|.
T Consensus 79 ~~~l~~---~~~~~~~i~~IGsHGQT 101 (370)
T 3cqy_A 79 NNLLAK---TKIAKDEIIAIGSHGQT 101 (370)
T ss_dssp HHHHHH---HCCCGGGEEEEEEEEEE
T ss_pred HHHHHH---cCCCcccccEEEeCCcc
Confidence 555554 57888999999988773
No 194
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=45.62 E-value=32 Score=26.70 Aligned_cols=21 Identities=19% Similarity=0.371 Sum_probs=18.1
Q ss_pred EEEEecCCCcceEEEEeCCCCc
Q psy9709 26 IGVIDEGTRTVRFAIISALTQE 47 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~ 47 (500)
++|||+|+..|=+++-|. .+.
T Consensus 3 iLglD~G~kriGvAvsd~-~~~ 23 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE-GVP 23 (98)
T ss_dssp EEEEEESSSEEEEEEECS-CCS
T ss_pred EEEEEeCCCEEEEEEEeC-CCC
Confidence 567999999999999997 553
No 195
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=45.40 E-value=5.3 Score=36.53 Aligned_cols=22 Identities=18% Similarity=0.080 Sum_probs=11.0
Q ss_pred EEecCCCcc--------eEEEEeCCCCcEEE
Q psy9709 28 VIDEGTRTV--------RFAIISALTQEEVV 50 (500)
Q Consensus 28 giDiGtt~~--------k~~v~d~~~g~~l~ 50 (500)
|+|+||.|+ |+++||- +|.++.
T Consensus 10 ~~~~~~~~~~~~~~~MIKaViFDl-DGTLvD 39 (250)
T 4gib_A 10 GVDLGTENLYFQSNAMIEAFIFDL-DGVITD 39 (250)
T ss_dssp --------------CCCCEEEECT-BTTTBC
T ss_pred cccCCCCCcccCccchhheeeecC-CCcccC
Confidence 599999986 8999998 997763
No 196
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=45.09 E-value=12 Score=35.81 Aligned_cols=23 Identities=13% Similarity=0.278 Sum_probs=18.0
Q ss_pred EEEEecCCCcceEEEEeCCCCcEE
Q psy9709 26 IGVIDEGTRTVRFAIISALTQEEV 49 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~~~g~~l 49 (500)
++|||+|++++|++..+. +|++.
T Consensus 2 ~igiD~G~sntK~~~~~~-~g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQES-DGTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECS-SSCEE
T ss_pred eEEEecCCccceEEEecC-CCEEE
Confidence 456999999999988665 67643
No 197
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=45.04 E-value=8.2 Score=37.94 Aligned_cols=18 Identities=39% Similarity=0.340 Sum_probs=15.5
Q ss_pred EEEEecCCCcceEEEEeC
Q psy9709 26 IGVIDEGTRTVRFAIISA 43 (500)
Q Consensus 26 i~giDiGtt~~k~~v~d~ 43 (500)
++|||+|||++++++++.
T Consensus 4 ~vGIDlGTt~s~va~~~~ 21 (383)
T 1dkg_D 4 IIGIDLGTTNSCVAIMDG 21 (383)
T ss_dssp CCEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCCEEEEEEEC
Confidence 456999999999999974
No 198
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=44.81 E-value=8.7 Score=40.16 Aligned_cols=19 Identities=21% Similarity=0.074 Sum_probs=16.7
Q ss_pred EEEEEeccCCCceEEEEeC
Q psy9709 154 LIGVIDEGTRTVRFAIISA 172 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~ 172 (500)
.++|||+|||++.+++++.
T Consensus 5 ~~iGIDlGTt~s~va~~~~ 23 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQH 23 (554)
T ss_dssp CCEEEEECSSEEEEEEECS
T ss_pred CEEEEEeCcccEEEEEEEC
Confidence 4789999999999999863
No 199
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=43.85 E-value=10 Score=36.67 Aligned_cols=25 Identities=32% Similarity=0.216 Sum_probs=20.1
Q ss_pred CEEEEEeccCCCceEEEEeCCCCeEEE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQEEVV 179 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~vi~ 179 (500)
..++.+|+|...+-+.++.. |.++.
T Consensus 147 ~~~lVvDiGggttdvsv~~~--~~~~~ 171 (344)
T 1jce_A 147 SGNMVVDIGGGTTEVAVISL--GSIVT 171 (344)
T ss_dssp SCEEEEEECSSCEEEEEEET--TEEEE
T ss_pred ceEEEEEeCCCeEEEEEEEc--CCEEe
Confidence 45788999999999999985 55553
No 200
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=43.40 E-value=11 Score=37.19 Aligned_cols=22 Identities=18% Similarity=0.021 Sum_probs=18.4
Q ss_pred EEEEEeccCCCceEEEEeCCCCeE
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEE 177 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~v 177 (500)
.++|||+|||++++++++. |++
T Consensus 24 ~viGID~GTt~s~va~~~~--g~~ 45 (404)
T 3i33_A 24 PAIGIDLGTTYSCVGVFQH--GKV 45 (404)
T ss_dssp CCEEEEECSSEEEEEEEET--TEE
T ss_pred CEEEEEcCCccEEEEEEEC--Cee
Confidence 4789999999999999873 643
No 201
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=43.25 E-value=27 Score=34.72 Aligned_cols=32 Identities=19% Similarity=0.469 Sum_probs=24.9
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeee
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSM 183 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~ 183 (500)
.+.+|+|..|+||+|..|||.++.+++.....
T Consensus 17 ~~~ILviN~GSSS~K~~lf~~~~~~~l~~g~i 48 (415)
T 2e1z_A 17 FPVVLVINCGSSSIKFSVLDVATCDVLMAGIA 48 (415)
T ss_dssp CCEEEEEEECSSEEEEEEEETTTCCEEEEEEE
T ss_pred CCeEEEEECCchhheEEEEECCCCCEEEEEEE
Confidence 34589999999999999999755566655433
No 202
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=43.07 E-value=8 Score=38.02 Aligned_cols=21 Identities=33% Similarity=0.257 Sum_probs=17.6
Q ss_pred EEEEEeccCCCceEEEEeCCCCe
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQE 176 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~ 176 (500)
.++|||+|||++++++++. |+
T Consensus 3 ~~vGIDlGTt~s~va~~~~--g~ 23 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDG--TT 23 (383)
T ss_dssp CCCEEECCSSEEEEEEEET--TE
T ss_pred cEEEEEcCCCCEEEEEEEC--Ce
Confidence 3689999999999999973 64
No 203
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=42.95 E-value=14 Score=36.04 Aligned_cols=21 Identities=38% Similarity=0.422 Sum_probs=18.3
Q ss_pred CEEEEEeccCCCceEEEEeCC
Q psy9709 153 PLIGVIDEGTRTVRFAIISAL 173 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~ 173 (500)
.++++||+||+++|..|++..
T Consensus 3 ~~~avID~GSns~Rl~I~~~~ 23 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIYSYD 23 (353)
T ss_dssp EEEEEEEECSSCEEEEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEEEEc
Confidence 468899999999999999853
No 204
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=42.75 E-value=77 Score=27.15 Aligned_cols=22 Identities=14% Similarity=0.363 Sum_probs=19.3
Q ss_pred EEEEEeccCCCceEEEEeCCCCe
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQE 176 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~ 176 (500)
.+||||-|++.+=.+++|.+ |+
T Consensus 2 rILGIDPGl~~tG~gvi~~~-g~ 23 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAVE-GK 23 (166)
T ss_dssp EEEEEECCSSEEEEEEEEEC-SS
T ss_pred EEEEEccccCceEEEEEEec-CC
Confidence 37999999999999999986 64
No 205
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=42.51 E-value=15 Score=38.89 Aligned_cols=22 Identities=27% Similarity=0.231 Sum_probs=18.4
Q ss_pred CCEEEEEeccCCCceEEEEeCC
Q psy9709 152 VPLIGVIDEGTRTVRFAIISAL 173 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~ 173 (500)
...++.+|+|+..+-+.++...
T Consensus 187 ~~~vlV~DlGGGT~Dvsi~~~~ 208 (605)
T 4b9q_A 187 NRTIAVYDLGGGAFDISIIEID 208 (605)
T ss_dssp SEEEEEEEECSSCEEEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEEEEe
Confidence 4578899999999999998853
No 206
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=41.92 E-value=54 Score=29.50 Aligned_cols=65 Identities=8% Similarity=0.107 Sum_probs=40.1
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLG 231 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~ 231 (500)
...+|+||.-|..+-+++++ + ++++ ....... .+..+. +...+++++++ .+++..+|.+|+
T Consensus 11 ~~~iLaidTS~~~~sval~~-~-~~~l-~~~~~~~---------r~Hse~----L~p~i~~~L~~---a~~~~~dld~Ia 71 (218)
T 2a6a_A 11 HHMNVLALDTSQRIRIGLRK-G-EDLF-EISYTGE---------KKHAEI----LPVVVKKLLDE---LDLKVKDLDVVG 71 (218)
T ss_dssp --CEEEEEECSSSEEEEEEE-T-TEEE-EEEEESC---------GGGGGH----HHHHHHHHHHH---HTCCGGGCSEEE
T ss_pred cceEEEEEcCCcCeEEEEEE-C-CEEE-EEEecch---------HHHHHH----HHHHHHHHHHH---cCCCHHHCCEEE
Confidence 34589999999999999998 3 7777 3221111 122233 33444555543 367788899999
Q ss_pred EcCC
Q psy9709 232 ITNQ 235 (500)
Q Consensus 232 vs~~ 235 (500)
++..
T Consensus 72 v~~G 75 (218)
T 2a6a_A 72 VGIG 75 (218)
T ss_dssp EECC
T ss_pred EEcC
Confidence 8643
No 207
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=41.72 E-value=29 Score=34.47 Aligned_cols=30 Identities=13% Similarity=0.326 Sum_probs=23.7
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEEEEeee
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEVVSHSM 183 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi~~~~~ 183 (500)
.+|+|..|+||+|..|||.++.+++.....
T Consensus 2 ~ILviN~GSSS~K~~lf~~~~~~~l~~g~i 31 (408)
T 1g99_A 2 KVLVINAGSSSLKYQLIDMTNESALAVGLC 31 (408)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEE
T ss_pred eEEEEECCchhheeEEEEcCCCcEEEEEEE
Confidence 378999999999999999765666654433
No 208
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=41.54 E-value=15 Score=38.85 Aligned_cols=18 Identities=39% Similarity=0.292 Sum_probs=16.5
Q ss_pred EEEEEeccCCCceEEEEe
Q psy9709 154 LIGVIDEGTRTVRFAIIS 171 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d 171 (500)
.++|||+|||++.+++++
T Consensus 3 ~viGIDlGTT~S~Va~~~ 20 (605)
T 4b9q_A 3 KIIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CEEEEECCSSEEEEEEEE
T ss_pred cEEEEEcCCCcEEEEEEE
Confidence 479999999999999987
No 209
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=39.76 E-value=23 Score=34.79 Aligned_cols=78 Identities=14% Similarity=0.175 Sum_probs=48.2
Q ss_pred CEEEEEeccCC--CceEEEEeCCCC--eEEEEeeeecccccC-------CCCeEEEChHHHHH---H----HHHHHHHHH
Q psy9709 153 PLIGVIDEGTR--TVRFAIISALTQ--EEVVSHSMDISTISP-------QEGWAEQDPMEILQ---A----VQTTMDRAI 214 (500)
Q Consensus 153 ~~~lgIDiGTt--s~k~~l~d~~~G--~vi~~~~~~~~~~~~-------~~g~~~~d~~~~~~---~----i~~~l~~~~ 214 (500)
.++||+=.||| .+-+++++.+ | +++.....+|+.... +++ ..+++++-+ . ..+++++++
T Consensus 2 ~~~IGlMSGTSlDGID~alv~~~-~~~~l~~~~~~py~~~lr~~l~~~~~~~--~~~~~~~~~l~~~lg~~~a~av~~~l 78 (371)
T 3qbx_A 2 PRYLGLMSGTSLDGMDIVLIEQG-DRTTLLASHYLPMPAGLREDILALCVPG--PDEIARAAEVEQRWVALAAQGVRELL 78 (371)
T ss_dssp CEEEEEECCSSCSEEEEEEEEES-SSEEEEEEEEEECCHHHHHHHHHTTSCC--BTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEEecccChhhhhEEEEEec-CCceecceeeecCCHHHHHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999998 6778888875 5 566777778774210 111 012222211 1 234445554
Q ss_pred HHHHhCCCCCCCeeEEEEcCCC
Q psy9709 215 EKLSAHGLSRDDIVTLGITNQR 236 (500)
Q Consensus 215 ~~~~~~~~~~~~I~~I~vs~~~ 236 (500)
+ +.++++++|.+||..+|.
T Consensus 79 ~---~~~~~~~~Id~IGsHGQT 97 (371)
T 3qbx_A 79 L---QQQMSPDEVRAIGSHGQT 97 (371)
T ss_dssp H---HTTCCGGGCCEEEECCEE
T ss_pred H---HcCCCcccccEEEeCCcc
Confidence 4 468888899999987773
No 210
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=39.60 E-value=6.4 Score=35.96 Aligned_cols=22 Identities=18% Similarity=0.069 Sum_probs=10.5
Q ss_pred EEEeccCCCc--------eEEEEeCCCCeEE
Q psy9709 156 GVIDEGTRTV--------RFAIISALTQEEV 178 (500)
Q Consensus 156 lgIDiGTts~--------k~~l~d~~~G~vi 178 (500)
-|+|.||.++ |+++||.+ |+++
T Consensus 9 ~~~~~~~~~~~~~~~~MIKaViFDlD-GTLv 38 (250)
T 4gib_A 9 SGVDLGTENLYFQSNAMIEAFIFDLD-GVIT 38 (250)
T ss_dssp ---------------CCCCEEEECTB-TTTB
T ss_pred ccccCCCCCcccCccchhheeeecCC-Cccc
Confidence 4799999987 89999996 9876
No 211
>3psf_A Transcription elongation factor SPT6; nucleus; 2.59A {Saccharomyces cerevisiae}
Probab=39.44 E-value=39 Score=37.87 Aligned_cols=31 Identities=10% Similarity=0.163 Sum_probs=25.1
Q ss_pred CCEEEEEeccC-----CCceEEEEeCCCCeEEEEeee
Q psy9709 152 VPLIGVIDEGT-----RTVRFAIISALTQEEVVSHSM 183 (500)
Q Consensus 152 ~~~~lgIDiGT-----ts~k~~l~d~~~G~vi~~~~~ 183 (500)
.+-++|||-|- +.+|++++|. +|+++.....
T Consensus 518 ~~~VlaldpG~~~~~~~g~k~a~vd~-~G~~l~~~~i 553 (1030)
T 3psf_A 518 IPKILSLTCGQGRFGADAIIAVYVNR-KGDFIRDYKI 553 (1030)
T ss_dssp CCCEEEEECTTCCTTTSCEEEEEECT-TSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCCeEEEEECC-CCCEEEEEEE
Confidence 34689999984 3899999997 4999987655
No 212
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=39.05 E-value=80 Score=32.69 Aligned_cols=66 Identities=18% Similarity=0.203 Sum_probs=35.8
Q ss_pred CEEEEEeccCCCceEEEEeCCC-C--eEEEEeeeecccccCCCCeEEEChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeE
Q psy9709 153 PLIGVIDEGTRTVRFAIISALT-Q--EEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVT 229 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~-G--~vi~~~~~~~~~~~~~~g~~~~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~ 229 (500)
+++.|||||.+++-+++-+.++ | +.+...-.++.=+ .| ..++...+. .++++++++ .+.+.+++.-
T Consensus 2 ~~i~gvdign~tte~~la~~~~~~~~~f~~s~~~~ttg~---kg-t~~n~~g~~----~~l~~~~~~---~~~~~~~~~l 70 (610)
T 2d0o_A 2 RYIAGIDIGNSSTEVALATLDEAGALTITHSALAETTGI---KG-TLRNVFGIQ----EALALVARG---AGIAVSDISL 70 (610)
T ss_dssp EEEEEEEECSSEEEEEEEEECTTCCEEEEEEEEEECCSS---TT-STTHHHHHH----HHHHHHHHH---HTCCGGGEEE
T ss_pred cEEEEEecCCcchheeeeeecCCCceEEeeccccccCCc---cC-cHHHHHHHH----HHHHHHHHH---cCCChhhcee
Confidence 6899999999888888765442 5 3444443333211 11 134444444 444445544 2445555544
No 213
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=36.13 E-value=15 Score=39.28 Aligned_cols=18 Identities=17% Similarity=0.089 Sum_probs=16.3
Q ss_pred EEEEeccCCCceEEEEeC
Q psy9709 155 IGVIDEGTRTVRFAIISA 172 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~ 172 (500)
++|||+|||++.+++++.
T Consensus 4 ~iGIDlGTtns~va~~~~ 21 (675)
T 3d2f_A 4 PFGLDLGNNNSVLAVARN 21 (675)
T ss_dssp CEEEECCSSEEEEEEEET
T ss_pred EEEEEcCCCcEEEEEEEC
Confidence 689999999999999873
No 214
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=36.08 E-value=18 Score=37.15 Aligned_cols=24 Identities=25% Similarity=0.116 Sum_probs=19.6
Q ss_pred CCEEEEEeccCCCceEEEEeCCCC
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQ 175 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G 175 (500)
...++.+|+|+..+-+.++...+|
T Consensus 160 ~~~vlV~D~GgGT~Dvsv~~~~~g 183 (509)
T 2v7y_A 160 DQTILVYDLGGGTFDVSILELGDG 183 (509)
T ss_dssp SEEEEEEEECSSCEEEEEEEEETT
T ss_pred CCEEEEEECCCCeEEEEEEEEcCC
Confidence 456889999999999999886435
No 215
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=35.95 E-value=28 Score=33.17 Aligned_cols=23 Identities=13% Similarity=0.221 Sum_probs=18.4
Q ss_pred EEEEeccCCCceEEEEeCCCCeEE
Q psy9709 155 IGVIDEGTRTVRFAIISALTQEEV 178 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~~~G~vi 178 (500)
.+|||+||+++|++..+.+ |++.
T Consensus 2 ~igiD~G~sntK~~~~~~~-g~~~ 24 (320)
T 2zgy_A 2 LVFIDDGSTNIKLQWQESD-GTIK 24 (320)
T ss_dssp EEEEEECSSEEEEEEECSS-SCEE
T ss_pred eEEEecCCccceEEEecCC-CEEE
Confidence 5899999999999876653 7654
No 216
>1dw0_A Cytochrome C; asparagine ligation, oxygen binding, disulfide bridge, oxygen storage/transport complex; HET: HEM; 1.82A {Rhodobacter sphaeroides} SCOP: a.3.1.1 PDB: 1dw1_A* 1dw2_A* 1dw3_A*
Probab=35.88 E-value=13 Score=29.86 Aligned_cols=33 Identities=27% Similarity=0.512 Sum_probs=26.1
Q ss_pred HHHH-HHHHhhChHHHHHhhcccccccchhHHHHHhhc
Q psy9709 294 ALKL-SWLIQNVSSVRRAIKENRCLFGTVDTWLVWNLT 330 (500)
Q Consensus 294 ~~kl-~Wl~~~~pe~~~~~~~~~~~~~~~~dyi~~~LT 330 (500)
..|+ .||++|..+++.+ .|.-..-.|||.|++|
T Consensus 78 ~akvekwf~rnc~~v~gr----~cta~EK~d~l~~l~~ 111 (112)
T 1dw0_A 78 SARVEKWLGRNCNSVIGR----DCTPGEKADLLAWLAA 111 (112)
T ss_dssp HHHHHHHHHHHHHHHHSS----CCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhHHHcc----cCCHHHHHHHHHHHHh
Confidence 4554 5999999999974 3567777899999987
No 217
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=35.77 E-value=22 Score=30.04 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=20.6
Q ss_pred EEEEEeccCCCceEEEEeCCCCeEE
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQEEV 178 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~vi 178 (500)
-+||||.|+..+.+++.|.. |.+.
T Consensus 4 riLGiDpG~~riGvAv~d~~-g~~a 27 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEM-GWTA 27 (150)
T ss_dssp EEEEEEECSSEEEEEEECTT-SSSE
T ss_pred EEEEEEccCCEEEEEEEECC-CCEE
Confidence 37999999999999999975 7654
No 218
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=35.08 E-value=16 Score=35.24 Aligned_cols=17 Identities=24% Similarity=-0.052 Sum_probs=14.6
Q ss_pred EEEEEeccCCCceEEEE
Q psy9709 154 LIGVIDEGTRTVRFAII 170 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~ 170 (500)
..+|||+||+++|+++.
T Consensus 4 ~~igIDlGT~~s~v~~~ 20 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR 20 (344)
T ss_dssp CEEEEEECSSEEEEEET
T ss_pred ceEEEEcCcCcEEEEEC
Confidence 36899999999999864
No 219
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=34.96 E-value=19 Score=38.05 Aligned_cols=21 Identities=33% Similarity=0.335 Sum_probs=18.1
Q ss_pred CCEEEEEeccCCCceEEEEeC
Q psy9709 152 VPLIGVIDEGTRTVRFAIISA 172 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~ 172 (500)
...++.+|+|+..+-+.++..
T Consensus 187 ~~~vlV~DlGGGT~Dvsi~~~ 207 (605)
T 2kho_A 187 NRTIAVYDLGGGTFDISIIEI 207 (605)
T ss_dssp EEEEEEEEECSSCEEEEEEEE
T ss_pred CCEEEEEECCCCeEEEEEEEE
Confidence 456889999999999999885
No 220
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=33.58 E-value=21 Score=36.76 Aligned_cols=19 Identities=32% Similarity=0.270 Sum_probs=16.7
Q ss_pred EEEEEeccCCCceEEEEeC
Q psy9709 154 LIGVIDEGTRTVRFAIISA 172 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~ 172 (500)
.++|||+|||++++++++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~ 21 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEG 21 (509)
T ss_dssp CEEEEEECSSEEEEEEEET
T ss_pred CEEEEEcCCceEEEEEEEC
Confidence 3789999999999999873
No 221
>3psi_A Transcription elongation factor SPT6; nucleus; 3.30A {Saccharomyces cerevisiae}
Probab=32.55 E-value=95 Score=35.51 Aligned_cols=31 Identities=10% Similarity=0.163 Sum_probs=25.2
Q ss_pred CCEEEEEeccC-----CCceEEEEeCCCCeEEEEeee
Q psy9709 152 VPLIGVIDEGT-----RTVRFAIISALTQEEVVSHSM 183 (500)
Q Consensus 152 ~~~~lgIDiGT-----ts~k~~l~d~~~G~vi~~~~~ 183 (500)
.+-++|||-|- +.+|++++|. +|+++.....
T Consensus 515 ~~~VlaldpG~r~~g~~g~k~a~vD~-~G~vl~~~~i 550 (1219)
T 3psi_A 515 IPKILSLTCGQGRFGADAIIAVYVNR-KGDFIRDYKI 550 (1219)
T ss_dssp CCCEEEEECTTCCTTTTCEEEEEECT-TSCEEEEEEE
T ss_pred CCeEEEecCCCCCCCCCceEEEEECC-CCCEEEEEEE
Confidence 35689999985 3899999997 4999987655
No 222
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=31.43 E-value=23 Score=37.40 Aligned_cols=17 Identities=41% Similarity=0.350 Sum_probs=15.8
Q ss_pred EEEEeccCCCceEEEEe
Q psy9709 155 IGVIDEGTRTVRFAIIS 171 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d 171 (500)
++|||+|||++.+++++
T Consensus 4 viGIDlGTt~s~va~~~ 20 (605)
T 2kho_A 4 IIGIDLGTTNSCVAIMD 20 (605)
T ss_dssp CEEEECCSSEEEEEEEE
T ss_pred EEEEEcCCcCEEEEEEE
Confidence 68999999999999987
No 223
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=30.89 E-value=19 Score=34.86 Aligned_cols=24 Identities=33% Similarity=0.324 Sum_probs=19.0
Q ss_pred CEEEEEeccCCCceEEEEeCCCCe
Q psy9709 153 PLIGVIDEGTRTVRFAIISALTQE 176 (500)
Q Consensus 153 ~~~lgIDiGTts~k~~l~d~~~G~ 176 (500)
..++.||+|+..+-++++....|.
T Consensus 190 ~~vlVvDIGgGTtDv~vi~~~~g~ 213 (346)
T 2fsj_A 190 GYGVVIDVGSRTTDVLTINLMDME 213 (346)
T ss_dssp SEEEEEEECSSCEEEEEEETTTTE
T ss_pred CcEEEEECCCCcEEEEEEEecCCE
Confidence 456889999999999999864343
No 224
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=29.29 E-value=47 Score=27.54 Aligned_cols=22 Identities=18% Similarity=0.223 Sum_probs=18.8
Q ss_pred EEEEEecCCCcceEEEEeCCCCc
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQE 47 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~ 47 (500)
.++|||+|+..|=+++-|. .+.
T Consensus 4 ~iLglD~G~kriGvAvsd~-~~~ 25 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQR-ITG 25 (138)
T ss_dssp EEEEEECCSSEEEEEEEET-TTT
T ss_pred eEEEEEeCCCEEEEEEEcC-CCC
Confidence 3677999999999999998 654
No 225
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=27.58 E-value=67 Score=26.78 Aligned_cols=36 Identities=31% Similarity=0.443 Sum_probs=30.4
Q ss_pred EChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcCC
Q psy9709 197 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQ 235 (500)
Q Consensus 197 ~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs~~ 235 (500)
.++++|+++..+.+++++++ .++++++|..|-||..
T Consensus 44 Nt~e~I~~At~ELl~eii~~---N~l~~eDIvSv~FTvT 79 (148)
T 1xho_A 44 NTADEIVAETQKLLKEMAEK---NGLEEDDIISIIFTVT 79 (148)
T ss_dssp SSHHHHHHHHHHHHHHHHHH---TTCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHH---cCCCHHHEEEEEEEeC
Confidence 46789999999999999876 5788999999988755
No 226
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=27.42 E-value=2.3e+02 Score=23.80 Aligned_cols=21 Identities=29% Similarity=0.474 Sum_probs=18.5
Q ss_pred EEEEeccCCCceEEEEeCCCCe
Q psy9709 155 IGVIDEGTRTVRFAIISALTQE 176 (500)
Q Consensus 155 ~lgIDiGTts~k~~l~d~~~G~ 176 (500)
+||||-|++++=.++++.+ |+
T Consensus 3 ILGIDPGl~~tG~gvi~~~-g~ 23 (158)
T 1hjr_A 3 ILGIDPGSRVTGYGVIRQV-GR 23 (158)
T ss_dssp EEEEECCSSEEEEEEEEEE-TT
T ss_pred EEEEccCCCCeeEEEEEec-CC
Confidence 7999999999999999975 64
No 227
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=26.65 E-value=27 Score=34.70 Aligned_cols=17 Identities=24% Similarity=0.319 Sum_probs=14.0
Q ss_pred EEEecCCCcceEEEEeC
Q psy9709 27 GVIDEGTRTVRFAIISA 43 (500)
Q Consensus 27 ~giDiGtt~~k~~v~d~ 43 (500)
++||+||+++|++....
T Consensus 8 ivID~Gs~~~k~G~~~~ 24 (418)
T 1k8k_A 8 CVVDCGTGYTKLGYAGN 24 (418)
T ss_dssp EEEEECSSEEEEEETTC
T ss_pred EEEECCCCeEEEeeCCC
Confidence 45999999999986654
No 228
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=25.49 E-value=31 Score=33.16 Aligned_cols=21 Identities=10% Similarity=0.140 Sum_probs=17.6
Q ss_pred cccCCEEEEEeccCCCceEEE
Q psy9709 149 QTQVPLIGVIDEGTRTVRFAI 169 (500)
Q Consensus 149 ~~~~~~~lgIDiGTts~k~~l 169 (500)
+|++++++|||+|.+++|++.
T Consensus 3 ~~~~~~iigiD~G~~~~K~~~ 23 (329)
T 4apw_A 3 NITNEYVMTLDAGKYETKLIG 23 (329)
T ss_dssp --CCEEEEEEEECSSEEEEEE
T ss_pred CccCceEEEEecCCceEEEEe
Confidence 467788999999999999986
No 229
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=24.82 E-value=32 Score=33.03 Aligned_cols=25 Identities=20% Similarity=0.158 Sum_probs=20.1
Q ss_pred CCEEEEEeccCCCceEEEEeCCCCeEE
Q psy9709 152 VPLIGVIDEGTRTVRFAIISALTQEEV 178 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d~~~G~vi 178 (500)
..-++.||||...+-.++++. |.++
T Consensus 171 ~~~v~vvDiGggTtd~~v~~~--g~~~ 195 (329)
T 4apw_A 171 NKNVAVIDFGGLNMGFSLYRN--CVVN 195 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEET--TEEC
T ss_pred cCCEEEEEeCCCcEEEEEEEC--CEEe
Confidence 456788999999999999983 7664
No 230
>1mzp_A 50S ribosomal protein L1P; ribosome, RNA-protein complex; 2.65A {Sulfolobus acidocaldarius} SCOP: e.24.1.1 PDB: 1pnu_5 1pny_5 1vor_7 1vou_7 1vow_7 1voy_7 1vp0_7 3e1b_Z 3e1d_Z
Probab=24.79 E-value=1.1e+02 Score=27.48 Aligned_cols=48 Identities=8% Similarity=0.154 Sum_probs=38.5
Q ss_pred CccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcCCcceeEEeeC
Q psy9709 64 GWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVWDL 115 (500)
Q Consensus 64 g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~~~~~~v~~d~ 115 (500)
|....+++++.+.+..+++.+.+.+ .- ...|..|-|++.|.--+.+|+
T Consensus 170 G~~~~~~e~L~eNi~a~i~~l~~~~---p~-~~~ik~v~lksTmgp~i~i~~ 217 (217)
T 1mzp_A 170 GTEDMKPEDLAENAIAVLNAIENKA---KV-ETNLRNIYVKTTMGKAVKVKR 217 (217)
T ss_dssp EETTSCHHHHHHHHHHHHHHHHHHC---CC-TTTEEEEEEEETTSCCEECCC
T ss_pred eCCCCCHHHHHHHHHHHHHHHHHhC---cc-chheEEEEEECCCCCCeeCCC
Confidence 4466899999999999999998773 22 378999999998877777764
No 231
>4h0o_A Acetate kinase; askha (acetate and S kinase, HSC70, actin) superfamily, ribonuclease H-like fold transferase; 2.40A {Entamoeba histolytica}
Probab=24.51 E-value=78 Score=31.24 Aligned_cols=27 Identities=11% Similarity=0.304 Sum_probs=21.4
Q ss_pred EEEEEecCCCcceEEEEeCCCCcEEEEEE
Q psy9709 25 LIGVIDEGTRTVRFAIISALTQEEVVSHS 53 (500)
Q Consensus 25 ~i~giDiGtt~~k~~v~d~~~g~~l~~~~ 53 (500)
.|++|..|+||+|..|||. .+++++..
T Consensus 15 ~iLviN~GSSSlKf~l~~~--~~~l~~G~ 41 (404)
T 4h0o_A 15 NVLIFNVGSSSLTYKVFCS--DNIVCSGK 41 (404)
T ss_dssp EEEEEEECSSCEEEEEEET--TEEEEEEE
T ss_pred eEEEEECCchhheeeEeec--chhhhcce
Confidence 4777999999999999995 45665543
No 232
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=22.17 E-value=83 Score=25.99 Aligned_cols=22 Identities=18% Similarity=0.274 Sum_probs=18.8
Q ss_pred EEEEEeccCCCceEEEEeCCCCe
Q psy9709 154 LIGVIDEGTRTVRFAIISALTQE 176 (500)
Q Consensus 154 ~~lgIDiGTts~k~~l~d~~~G~ 176 (500)
-++|||+|+..|=+++-|.. +.
T Consensus 4 ~iLglD~G~kriGvAvsd~~-~~ 25 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI-TG 25 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT-TT
T ss_pred eEEEEEeCCCEEEEEEEcCC-CC
Confidence 48999999999999999974 53
No 233
>1dbf_A Protein (chorismate mutase); shikimate pathway, isomerase; 1.30A {Bacillus subtilis} SCOP: d.79.1.2 PDB: 1com_A 2chs_A 2cht_A* 1fnj_A 1fnk_A
Probab=22.07 E-value=78 Score=25.74 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=30.2
Q ss_pred EChHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcCC
Q psy9709 197 QDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQ 235 (500)
Q Consensus 197 ~d~~~~~~~i~~~l~~~~~~~~~~~~~~~~I~~I~vs~~ 235 (500)
.++++++++..+.+.+++++ .++++++|.+|-||..
T Consensus 15 Nt~e~I~~at~eLl~~i~~~---N~l~~~dIvSv~FT~T 50 (127)
T 1dbf_A 15 DTEEEILQKTKQLLEKIIEE---NHTKPEDVVQMLLSAT 50 (127)
T ss_dssp CCHHHHHHHHHHHHHHHHHH---HCCCGGGEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHH---cCCCHHHEEEEEEEeC
Confidence 46789999999999999886 4788999999988755
No 234
>2ov7_A 50S ribosomal protein L1; 2.30A {Thermus thermophilus} PDB: 2oum_A 2vpl_A
Probab=22.05 E-value=1.9e+02 Score=23.82 Aligned_cols=80 Identities=11% Similarity=0.091 Sum_probs=53.2
Q ss_pred CcceEEEEeCCCCcEEEEEEeeeeeecCCCCccccCHHHHHHHHHHHHHHHHHHHHhCCCCCCCeeEEEEcCCcceeEEe
Q psy9709 34 RTVRFAIISALTQEEVVSHSMDISTISPQEGWAEQDPMEILQAVQTTMDRAIEKLSAHGLSRDDIVTLGITNQRETTVVW 113 (500)
Q Consensus 34 t~~k~~v~d~~~g~~l~~~~~~~~~~~~~~g~~e~d~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~Igis~~~~~~v~~ 113 (500)
..+|..|.=. .|..+.-........+-.-|....+++++.+.+...+..+.+. +..+.....|..|-|++.|.--+.+
T Consensus 56 q~vrgtV~LP-~gg~v~fr~dk~~~ih~~VGk~sf~~e~L~eNi~a~i~~l~~~-kp~~~kg~~ik~v~issTMGp~i~i 133 (137)
T 2ov7_A 56 QNVRGTVSLP-HGGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAH-KPEGAKGTFLRSVYVTTTMGPSVRI 133 (137)
T ss_dssp CCCEEEEECT-TSCEEEEECCTTSEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-SCSSCCSCSEEEEEEEETTSCCEEB
T ss_pred ceeeEEEEcC-CCCeEEEEECCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHh-CcccccCceEEEEEEECCCCCCEEe
Confidence 5678777777 5522221111122233334678899999999999999888754 2233333579999999998877778
Q ss_pred eC
Q psy9709 114 DL 115 (500)
Q Consensus 114 d~ 115 (500)
|.
T Consensus 134 d~ 135 (137)
T 2ov7_A 134 NP 135 (137)
T ss_dssp CT
T ss_pred cC
Confidence 76
No 235
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=20.98 E-value=37 Score=33.63 Aligned_cols=20 Identities=20% Similarity=0.154 Sum_probs=16.1
Q ss_pred CCEEEEEeccCCCceEEEEe
Q psy9709 152 VPLIGVIDEGTRTVRFAIIS 171 (500)
Q Consensus 152 ~~~~lgIDiGTts~k~~l~d 171 (500)
..-.++||+||+++|++...
T Consensus 4 ~~~~ivID~Gs~~~k~G~~~ 23 (418)
T 1k8k_A 4 RLPACVVDCGTGYTKLGYAG 23 (418)
T ss_dssp CSCCEEEEECSSEEEEEETT
T ss_pred CCCeEEEECCCCeEEEeeCC
Confidence 33467899999999998754
No 236
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=20.02 E-value=1.3e+02 Score=29.24 Aligned_cols=93 Identities=19% Similarity=0.078 Sum_probs=53.7
Q ss_pred ceeeechhhhchhHHHHHHHHHcCCCCCHHHHHHHHHhcCC-CCCeEEeccCCCCCCC--CCCCCCcEEEEcCC------
Q psy9709 403 PIYALEGSIAVAGAAVKWLRDNLNLMDNVRETESLAEKVMT-TGDVYFVPAFGGLYAP--YWRKDARGVICGMT------ 473 (500)
Q Consensus 403 ~~~~~~g~~~~~G~~~~w~~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~P~~~G~r~P--~~~~~~~g~f~Gl~------ 473 (500)
+.|...+.+..||..|-=+...+....+++++-++|.+-.. .-++ .+-.+.|..-+ ....+.-++-||=.
T Consensus 195 ~~f~rvgG~siGGGTflGL~~lLtg~~~~dEl~~lA~~Gd~~~vDl-lV~DIYg~~y~~~gL~~~~~ASsFGk~~~~~~~ 273 (360)
T 2i7n_A 195 DNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVDK-LVKDIYGGDYERFGLQGSAVASSFGNMMSKEKR 273 (360)
T ss_dssp TEEEEEEEESCSHHHHHHHHHHHHCCCSHHHHHHHHHHCCGGGTSE-EHHHHHSSCBGGGTBCTTSEEETTTTTTSHHHH
T ss_pred CCEEEeccccCccHhHHHHHHHHhCCCCHHHHHHHHHcCCCCcccc-eeeecccCcccccCCCccceeehhhhHhhHhhh
Confidence 46765555555544444444455334689999999865331 2222 23333332211 12234445544444
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q psy9709 474 QFTTKGHIIRAALEAICFQTRDI 496 (500)
Q Consensus 474 ~~~~~~~l~rAv~Egia~~~~~~ 496 (500)
.+.+++|++++++..|+..+.++
T Consensus 274 ~~~~~eDIa~gll~sVa~~I~~l 296 (360)
T 2i7n_A 274 DSISKEDLARATLVTITNNIGSI 296 (360)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHH
Confidence 25689999999999999987655
Done!