RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy9711
(198 letters)
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle
structural genomics center for infectious disease, S
coccidioides, valley fever; 2.35A {Coccidioides immitis}
Length = 318
Score = 183 bits (467), Expect = 8e-58
Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 10/194 (5%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T EE+ ++I+T R+ I+AG STR ++ A+ AGAN L+L P YF K
Sbjct: 62 TREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYFGKA 121
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTF---VTNIDISVDTLVKLAH-HENIRGVKDT-- 119
T +I F V+ SP+PV+IYN F ID+ D + +A + N+ GVK T
Sbjct: 122 TTPPVIKSFFDDVSCQSPLPVVIYN--FPGVCNGIDLDSDMITTIARKNPNVVGVKLTCA 179
Query: 120 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAG 179
K+ +A FSVF G + +L+ GL VG AG I A + V + ++Y+L KAG
Sbjct: 180 SVGKITRLAATLPPAAFSVFGGQSDFLIGGLSVGSAGCIAAFANVFPKTVSKIYELYKAG 239
Query: 180 KWEEAMKLQHRLVK 193
K ++AM+L +
Sbjct: 240 KVDQAMELHRKAAL 253
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis,
pyruvate, TIM barrel, NYSGXRC, PSI2., structural
genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris}
Length = 300
Score = 160 bits (406), Expect = 7e-49
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 7/188 (3%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
++ ++ + ++ + +AG S + + K GA+ L + YF
Sbjct: 55 GTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAILEAYF--P 112
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKD-TDNI-K 123
+ + I +F ++AD IPV+IY N D+++D + +LA H IR +KD + N +
Sbjct: 113 LKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDASTNTGR 172
Query: 124 LANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEE 183
L ++ N+ D VF+ SA + +L+G G + + + LY+L KA +W+E
Sbjct: 173 LLSIINRCGD-ALQVFSASAHIPAAVMLIGGVGWMAGPACIAPRQSVALYELCKAQRWDE 231
Query: 184 AMKLQHRL 191
A+ LQ +L
Sbjct: 232 ALMLQRKL 239
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel,
schiff base, hydroxyproline metabolis; HET: KPI; 1.97A
{Homo sapiens} PDB: 3s5n_A
Length = 307
Score = 158 bits (402), Expect = 3e-48
Identities = 78/194 (40%), Positives = 129/194 (66%), Gaps = 10/194 (5%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T E+L+++S +RQ K ++AG+ CEST+AT+++T A+ GA+AA+++ P Y++ +
Sbjct: 65 TSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYYRGR 124
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKDT--D 120
M+ + H+ VAD SPIPV++Y+ V T +D+ VD +V L+ H NI G+ D+ D
Sbjct: 125 MSSAALIHHYTKVADLSPIPVVLYS---VPANTGLDLPVDAVVTLSQHPNIVGMXDSGGD 181
Query: 121 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
++ + ++T+ +F V AGSAG+L++ +G GG+ AL+ VLG +C+L L G+
Sbjct: 182 VTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQ 241
Query: 181 WEEAMKLQHRLVKP 194
WE+A KLQHRL++P
Sbjct: 242 WEDAQKLQHRLIEP 255
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM
barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639}
PDB: 2nux_A 2nuy_A
Length = 288
Score = 153 bits (388), Expect = 2e-46
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 11/187 (5%)
Query: 8 TEEEKLKIISTLRQETKKTIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKKMT 67
+++EK + ++ L T K +I + ++L + + + PYYF ++
Sbjct: 50 SKDEKRQNLNALYDVTHK-LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYF-PRLP 107
Query: 68 EDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKD-TDNI-KLA 125
E + +++ +A S + IYN T DI L L ++G+KD ++
Sbjct: 108 EKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSLP----VKGIKDTNQDLAHSL 163
Query: 126 NMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAM 185
V+ GS + L+ G + + + + I + DL K GK ++A+
Sbjct: 164 EYKLNLPG--VKVYNGSNTLIYY-SLLSLDGVVASFTNFIPEVIVKQRDLIKQGKLDDAL 220
Query: 186 KLQHRLV 192
+LQ +
Sbjct: 221 RLQELIN 227
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus
influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A*
1f74_A* 1f7b_A*
Length = 293
Score = 152 bits (386), Expect = 6e-46
Identities = 41/188 (21%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
+ EEK +I + E K +IA + + ++L + A + G + + P+Y K
Sbjct: 55 STEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFY--YK 112
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKD-TDNI-K 123
+ I ++ ++ + +I+Y+ F+T +++ ++ +L + + GVK +
Sbjct: 113 FSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVKFTAGDFYL 172
Query: 124 LANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEE 183
L + + ++AG +L +G G I + V G ++++L KAGK +E
Sbjct: 173 LERLKKAYPN--HLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKE 230
Query: 184 AMKLQHRL 191
A+++QH
Sbjct: 231 ALEIQHVT 238
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase,
NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli}
PDB: 2v8z_A 3nev_A* 3n2x_A*
Length = 343
Score = 149 bits (378), Expect = 3e-44
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
EE+ I + + + GT + R TI+L+Q A +AGA+ +++ PYY K
Sbjct: 82 GAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYY--WK 139
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAH-HENIRGVKD-TD 120
++E + +F VAD+ +PV++YN T D++ + LA NI G+KD D
Sbjct: 140 VSEANLIRYFEQVADSVTLPVMLYN---FPALTGQDLTPALVKTLADSRSNIIGIKDTID 196
Query: 121 NI-KLANMANQTKDL--NFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAK 177
++ L +M + K +F+V G +L + LL+G G I+A L +
Sbjct: 197 SVAHLRSMIHTVKGAHPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWR 256
Query: 178 AGKWEEAMKLQHRL 191
G +A L
Sbjct: 257 DGDVAKAAGYHQTL 270
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism,
pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1
PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Length = 293
Score = 146 bits (372), Expect = 8e-44
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 8 TEEEKLKIISTLRQETKKTIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKKMT 67
+ EEKL+ + + T K II + I L + + PYY+ +M+
Sbjct: 50 SPEEKLENLKAVYDVTNK-IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAPYYYP-RMS 107
Query: 68 EDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKD-TDNI-KLA 125
E + ++F ++ + SP PV +YN T DI ++ GVKD +NI
Sbjct: 108 EKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKEIG---CFTGVKDTIENIIHTL 164
Query: 126 NMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAM 185
+ + V++GS + + G G + A S L + LA K +EA+
Sbjct: 165 DYKRLNPN--MLVYSGSDMLIATVASTGLDGNVAAGSNYLPEVTVTIKKLAMERKIDEAL 222
Query: 186 KLQHRL 191
KLQ
Sbjct: 223 KLQFLH 228
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel,
thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB:
2r94_A
Length = 286
Score = 144 bits (366), Expect = 5e-43
Identities = 44/189 (23%), Positives = 73/189 (38%), Gaps = 15/189 (7%)
Query: 8 TEEEKLKIISTLRQETKKTIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKKMT 67
+ +EK+++ ++ +I + I L + A GA A L PYYF + +
Sbjct: 49 SLQEKMELTDAATSAARR-VIVQVASLNADEAIALAKYAESRGAEAVASLPPYYFPRL-S 106
Query: 68 EDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDNI- 122
E I ++F + IPV +YN D+ +L IRGVKD +++
Sbjct: 107 ERQIAKYFRDLCSAVSIPVFLYN---YPAAVGRDVDARAAKELG---CIRGVKDTNESLA 160
Query: 123 KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWE 182
V+ GS + + V G + + + L + + D AG E
Sbjct: 161 HTLAYKRYLPQ--ARVYNGSDSLVFASFAVRLDGVVASSANYLPELLAGIRDAVAAGDIE 218
Query: 183 EAMKLQHRL 191
A LQ L
Sbjct: 219 RARSLQFLL 227
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium
tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A
{Agrobacterium tumefaciens str}
Length = 332
Score = 143 bits (363), Expect = 3e-42
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T EE+ + I + +AG T + L + A AGA+A L+ Y
Sbjct: 85 TREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAPVSY--TP 142
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDTDNIK-- 123
+T++ Y HF +VA + +P+ IYNN T S + LV+LA+ NIR +K
Sbjct: 143 LTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPLPADAD 202
Query: 124 ----LANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAG 179
LA + + D +F++ L G + ++ +L P +L A+AG
Sbjct: 203 YAGELARLRPKLSD-DFAIGYSGDWGCTDATLAGGDTWYSVVAGLLPVPALQLMRAAQAG 261
Query: 180 KWEEAMKLQHRL 191
EEA +L
Sbjct: 262 NAEEAKRLDATF 273
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A
{Pseudomonas aeruginosa}
Length = 315
Score = 142 bits (360), Expect = 7e-42
Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 6/188 (3%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
++ E +++ + + I +T T+ Q A GA A ++L Y K
Sbjct: 75 SDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISY--WK 132
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-HHENIRGVKD-TDNIK 123
+ E +++H+ +V + +PV++YNN + ID+SV+ ++++ +N+ VK+ T +I+
Sbjct: 133 LNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKESTGDIQ 192
Query: 124 LANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEE 183
+ + + G L + G G +A ++ +LY G E+
Sbjct: 193 RMHKLRLLGEGRVPFYNGCNPLALEAFVAGAKGWCSAAPNLIPTLNGQLYQAVLDGDLEK 252
Query: 184 AMKLQHRL 191
A L +R
Sbjct: 253 ARALFYRQ 260
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine
biosynthesis;spine, lyase; 1.94A {Bacillus anthracis}
SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Length = 301
Score = 141 bits (358), Expect = 1e-41
Identities = 65/191 (34%), Positives = 116/191 (60%), Gaps = 13/191 (6%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T EEK+ + + K +IAGT +T A+IDLT+KA + G +A +++ PYY K
Sbjct: 63 TSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYY--NK 120
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
+++ +Y+HF ++A+++P+PV++YN V + + ISVDT+V+L+ ENI +KD +
Sbjct: 121 PSQEGMYQHFKAIAESTPLPVMLYN---VPGRSIVQISVDTVVRLSEIENIVAIKDAGGD 177
Query: 122 I-KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
+ + + +T D +F+V++G G L + VG G ++ S V+G + E+ +AG+
Sbjct: 178 VLTMTEIIEKTAD-DFAVYSGDDGLTLPAMAVGAKGIVSVASHVIGNEMQEMIAAFQAGE 236
Query: 181 WEEAMKLQHRL 191
+++A KL L
Sbjct: 237 FKKAQKLHQLL 247
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI
biosynthesis, schiff base, cytoplasm, diaminopimelate
biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Length = 311
Score = 140 bits (356), Expect = 3e-41
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 13/191 (6%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAK-AGANAALILCPYYFQK 64
T +E+L++ + +++ +IAG TR +I+ ++ A+ G A L + PYY
Sbjct: 58 THDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYY--N 115
Query: 65 KMTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TD 120
K +++ +Y+HF ++AD S +P+IIYN + ++++ +T+++LA H NI GVK+ T
Sbjct: 116 KPSQEGMYQHFKAIADASDLPIIIYN---IPGRVVVELTPETMLRLADHPNIIGVKECTS 172
Query: 121 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
+A + + F ++ G G + +G G I+ S G + E++
Sbjct: 173 LANMAYLIEHKPE-EFLIYTGEDGDAFHAMNLGADGVISVASHTNGDEMHEMFTAIAESD 231
Query: 181 WEEAMKLQHRL 191
++A +Q +
Sbjct: 232 MKKAAAIQRKF 242
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase;
HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A
1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A*
3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A
3den_A* 2a6l_A 2a6n_A 3g0s_A
Length = 292
Score = 140 bits (354), Expect = 4e-41
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
+E ++ I IAGT +T I LTQ+ +G L + PYY +
Sbjct: 52 NHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY--NR 109
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
+++ +Y+HF ++A+++ +P I+YN V T D+ +T+ +LA +NI G+ + T N
Sbjct: 110 PSQEGLYQHFKAIAEHTDLPQILYN---VPSRTGCDLLPETVGRLAKVKNIIGIXEATGN 166
Query: 122 IKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKW 181
+ N + +F + +G L + G G I+ + V + ++ LA G +
Sbjct: 167 LTRVNQIKELVSDDFVLLSGDDASALDFMQYGGHGVISVTANVAARDMAQMCKLAAEGHF 226
Query: 182 EEAMKLQHRL 191
EA + RL
Sbjct: 227 AEARVINERL 236
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel,
amino-acid biosynthesis, diaminopimelate biosynthesis;
2.00A {Neisseria meningitidis serogroup B}
Length = 297
Score = 137 bits (348), Expect = 3e-40
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 11/190 (5%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
+ EE +I + + K + IAGT +T I L+Q A KAGA+ L + PYY K
Sbjct: 58 SVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYY--NK 115
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
+++ IY+HF ++A+ + IP+IIYN V T + ++ DT+++LA NI GVK+ + N
Sbjct: 116 PSQEGIYQHFKTIAEATSIPMIIYN---VPGRTVVSMTNDTILRLAEIPNIVGVKEASGN 172
Query: 122 IKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKW 181
I F V +G L +L G G I + ++ A G
Sbjct: 173 IGSNIELINRAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMCRAALQGDI 232
Query: 182 EEAMKLQHRL 191
A +L RL
Sbjct: 233 ALARELNDRL 242
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis,
diaminopimelate biosyn lyase, lysine biosynthesis,
schiff base; 1.50A {Hahella chejuensis}
Length = 297
Score = 137 bits (347), Expect = 4e-40
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 11/190 (5%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
TEEE ++++ + ++ + + IAG + + Q A +AGA+A L + YY +
Sbjct: 51 TEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYY--NR 108
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
+++ +Y+HF V D IP+I+YN + +DI +T+ +LA I GVKD T +
Sbjct: 109 PSQEGLYQHFKMVHDAIDIPIIVYN---IPPRAVVDIKPETMARLAALPRIVGVKDATTD 165
Query: 122 IKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKW 181
+ + + FS +G ++ G G I+ + + ++ G +
Sbjct: 166 LARISRERMLINKPFSFLSGDDMTAIAYNASGGQGCISVSANIAPALYGQMQTATLQGDF 225
Query: 182 EEAMKLQHRL 191
EA+++ L
Sbjct: 226 REALRIHDLL 235
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine
biosynthesis, amino-acid biosynthesis, diaminopimelate
biosynthesis; HET: KPI CME; 2.10A {Mycobacterium
tuberculosis} PDB: 1xxx_A
Length = 304
Score = 136 bits (345), Expect = 9e-40
Identities = 50/190 (26%), Positives = 89/190 (46%), Gaps = 11/190 (5%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T+ EK++++ + + +IAG T +I L + A GA+ L++ PYY K
Sbjct: 66 TDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYY--SK 123
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKDTDNI 122
+ + HF +VAD + +P+++Y+ + + + I DT+ LA H NI GV D
Sbjct: 124 PPQRGLQAHFTAVADATELPMLLYD---IPGRSAVPIEPDTIRALASHPNIVGVXDAKA- 179
Query: 123 KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWE 182
L + A D + ++G L L +G G I+ ++ + G + EL +G
Sbjct: 180 DLHSGAQIMADTGLAYYSGDDALNLPWLRMGATGFISVIAHLAAGQLRELLSAFGSGDIA 239
Query: 183 EAMKLQHRLV 192
A K+ +
Sbjct: 240 TARKINIAVA 249
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A
C-terminal alpha-helical segment, amino-acid
biosynthesis, cytoplasm; HET: MCL; 2.20A
{Corynebacterium glutamicum}
Length = 304
Score = 136 bits (344), Expect = 1e-39
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 11/190 (5%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T EKL+++ +R+E +IAG +TR +++L + AA AGA+ L++ PYY K
Sbjct: 67 TAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY--SK 124
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKDTDNI 122
+++ + HF ++A + +P+ +Y+ + + I I DT+ +L+ I V D
Sbjct: 125 PSQEGLLAHFGAIAAATEVPICLYD---IPGRSGIPIESDTMRRLSELPTILAVXDAKG- 180
Query: 123 KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWE 182
L + K+ + ++G L L +G +G I+ + + ELY + G
Sbjct: 181 DLVAATSLIKETGLAWYSGDDPLNLVWLALGGSGFISVIGHAAPTALRELYTSFEEGDLV 240
Query: 183 EAMKLQHRLV 192
A ++ +L
Sbjct: 241 RAREINAKLS 250
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine
biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter
baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A*
3tdf_A 3u8g_A 3uqn_A 4dxv_A
Length = 291
Score = 136 bits (344), Expect = 1e-39
Identities = 59/191 (30%), Positives = 105/191 (54%), Gaps = 13/191 (6%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
+ EE ++I + + K I IAGT STR I+LT+ A GA+AAL++ PYY K
Sbjct: 52 SMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYY--NK 109
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
T++ +Y+H+ ++A+ +P+I+YN V T +D+S DT V+LA NI G+KD T +
Sbjct: 110 PTQEGLYQHYKAIAEAVELPLILYN---VPGRTGVDLSNDTAVRLAEIPNIVGIKDATGD 166
Query: 122 I-KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
+ + + + +V++G +L+G G I+ + + + E+ +A A
Sbjct: 167 VPRGKALIDALNG-KMAVYSGDDETAWELMLLGADGNISVTANIAPKAMSEVCAVAIAKD 225
Query: 181 WEEAMKLQHRL 191
++A L +++
Sbjct: 226 EQQAKTLNNKI 236
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel,
cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A*
3noe_A 3ps7_A* 3s8h_A
Length = 314
Score = 136 bits (345), Expect = 1e-39
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
EE +++I + + K I IAGT STR + LT+ A GA+A L++ PYY K
Sbjct: 74 DVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYY--NK 131
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
T++ +Y+HF +A+ IP I+YN V T+ D+ +T+ +L+ NI G+K+ T +
Sbjct: 132 PTQEGMYQHFRHIAEAVAIPQILYN---VPGRTSCDMLPETVERLSKVPNIIGIKEATGD 188
Query: 122 IK-LANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
++ + + +F V++G + +L+G G I+ + V + +L A G
Sbjct: 189 LQRAKEVIERVGK-DFLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGD 247
Query: 181 WEEAMKLQHRL 191
A + RL
Sbjct: 248 AAAARAINDRL 258
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel
fold, structural genomics, NPPSFA; 2.20A
{Methanocaldococcus jannaschii DSM2661}
Length = 289
Score = 135 bits (342), Expect = 2e-39
Identities = 51/191 (26%), Positives = 96/191 (50%), Gaps = 14/191 (7%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
+ EE K+I + + IAG T I+L+ A GA+A L + PYY K
Sbjct: 51 SHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY--NK 108
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAH-HENIRGVKD-TD 120
T++ + +HF VA++ +P+++YN V T +++ T+ LA + NI VK+
Sbjct: 109 PTQEGLRKHFGKVAESINLPIVLYN---VPSRTAVNLEPKTVKLLAEEYSNISAVKEANP 165
Query: 121 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
N L+ ++ D +V +G+ L + +G G I+ ++ ++ E+ + A G
Sbjct: 166 N--LSQVSELIHDAKITVLSGNDELTLPIIALGGKGVISVVANIVPKEFVEMVNYALEGD 223
Query: 181 WEEAMKLQHRL 191
+E+A ++ ++L
Sbjct: 224 FEKAREIHYKL 234
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid
biosynthesis, cytoplasm, diaminopimelate biosynthesis,
lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB:
3bi8_A* 3ird_A*
Length = 291
Score = 134 bits (340), Expect = 3e-39
Identities = 55/191 (28%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
TE E+ + I + + K I IAGT +T A+I +++ A G + L++ PYY K
Sbjct: 52 TETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY--NK 109
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
T+ + +HF +V+D P+IIYN V T ++I+ TL +L +NI V + + N
Sbjct: 110 TTQKGLVKHFKAVSDAVSTPIIIYN---VPGRTGLNITPGTLKELCEDKNIVAVXEASGN 166
Query: 122 IKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKW 181
I +++G+ ++ L +G G I+ L+ V+ + + +L GK
Sbjct: 167 ISQIAQIKALCGDKLDIYSGNDDQIIPILALGGIGVISVLANVIPEDVHNMCELYLNGKV 226
Query: 182 EEAMKLQHRLV 192
EA+K+Q +
Sbjct: 227 NEALKIQLDSL 237
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; 1.90A {Aquifex aeolicus}
Length = 294
Score = 134 bits (341), Expect = 3e-39
Identities = 65/191 (34%), Positives = 97/191 (50%), Gaps = 12/191 (6%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T EE K+I + I IAGT +T + LT A + GA+ AL++ PYY K
Sbjct: 51 TFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY--NK 108
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLA-HHENIRGVKD-TD 120
T+ +YEHF +VA IP+IIYN + T ++ISVDT+ KLA ENI K+ T
Sbjct: 109 PTQRGLYEHFKTVAQEVDIPIIIYN---IPSRTCVEISVDTMFKLASECENIVASKESTP 165
Query: 121 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
N+ + + +FSV +G L + +G G I+ + V+ + EL A G
Sbjct: 166 NMDRISEIVKRLGESFSVLSGDDSLTLPMMALGAKGVISVANNVMPREVKELIRAALEGD 225
Query: 181 WEEAMKLQHRL 191
+ A ++ + L
Sbjct: 226 FRRAREIHYYL 236
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis,
dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus
thermophilus}
Length = 283
Score = 133 bits (337), Expect = 9e-39
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 8 TEEEKLKIISTLRQETKKTIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKKMT 67
T EE+ + + LR +K + G E+ +A AGA A L P Y+ +
Sbjct: 48 TPEERARGLRALRP--RKPFLVGLMEETLPQAEGALLEAKAAGAMALLATPPRYYHGSLG 105
Query: 68 EDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDNI- 122
L ++ ++A+ +P+ +Y+ V T +D+ ++ + LA H N+ G+KD + ++
Sbjct: 106 AGL-LRYYEALAEK--MPLFLYH---VPQNTKVDLPLEAVEALAPHPNVLGIKDSSGDLS 159
Query: 123 KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWE 182
++A + ++ F V+ G A L L +G GGI A + + L D + G+
Sbjct: 160 RIAFYQARLQE--FRVYTGHAPTFLGALALGAEGGILAAANLAPRAYRALLDHFREGRLA 217
Query: 183 EAMKLQHRL 191
EA +LQ +L
Sbjct: 218 EAQELQKKL 226
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target
9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16}
Length = 316
Score = 134 bits (339), Expect = 9e-39
Identities = 38/192 (19%), Positives = 77/192 (40%), Gaps = 15/192 (7%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGT-YCESTRATIDLTQKAAKAGANAALILCPYYFQK 64
+ EE + + + +AG Y +T I+L A AGA+A +I P +
Sbjct: 63 SLEEAKEEVRRTVEYVHGRALVVAGIGY--ATSTAIELGNAAKAAGADAVMIHMPIH--P 118
Query: 65 KMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKD-TDNIK 123
+T +Y +F + + P ++Y + +IS LV LA +N+ GVK +++
Sbjct: 119 YVTAGGVYAYFRDIIEALDFPSLVYF----KDPEISDRVLVDLAPLQNLVGVKYAINDLP 174
Query: 124 LAN--MANQTKDLNFSVFAGSAGYLLSGLL-VGCAGGINALSAVLGGPICELYDLAKAGK 180
+ + ++ + G+A G G + L +L E+ + +
Sbjct: 175 RFAKVVRSIPEEHQIAWICGTAEKWAPFFWHAGAKGFTSGLVNLLPQKAVEMLEALRNND 234
Query: 181 WEEAMKLQHRLV 192
+ ++ +V
Sbjct: 235 NDAVWRIWEDIV 246
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid
mimetics, aldolase, S base, carbohydrate metabolism,
N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A
{Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A*
2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A
3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A
3lcw_A
Length = 303
Score = 134 bits (338), Expect = 1e-38
Identities = 41/194 (21%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
+ E+ +++ + +E K +IA C ST + L A + G +A + P+Y
Sbjct: 62 SLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFY--YP 119
Query: 66 MTEDLIYEHFISVADN-SPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKDT-- 119
+ + +H+ ++ D+ +P+++YN + + + +++D + L + + T
Sbjct: 120 FSFEEHCDHYRAIIDSADGLPMVVYN---IPALSGVKLTLDQINTLVTLPGVGALXQTSG 176
Query: 120 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAG 179
D ++ + + D ++ G SGLL G GGI + ++G + K G
Sbjct: 177 DLYQMEQIRREHPD--LVLYNGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEG 234
Query: 180 KWEEAMKLQHRLVK 193
+ A KLQ K
Sbjct: 235 DIQTAQKLQTECNK 248
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base,
lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Length = 292
Score = 132 bits (334), Expect = 3e-38
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 12/191 (6%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
++ E +++ + + IAG ST I + A AGA+ LI+ PYY K
Sbjct: 51 SKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYY--NK 108
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLA-HHENIRGVKD-TD 120
T++ IY+HF ++ S IP+I+YN + + I+I V+TL ++ N++GV D T
Sbjct: 109 PTQEGIYQHFKAIDAASTIPIIVYN---IPGRSAIEIHVETLARIFEDCPNVKGVXDATG 165
Query: 121 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
N+ ++ +F++ G G L + G G I+ + V + G
Sbjct: 166 NLLRPSLERMACGEDFNLLTGEDGTALGYMAHGGHGCISVTANVAPALCADFQQACLNGD 225
Query: 181 WEEAMKLQHRL 191
+ A+KLQ RL
Sbjct: 226 FAAALKLQDRL 236
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Length = 315
Score = 132 bits (334), Expect = 6e-38
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 12/191 (6%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T EE +II ++ K + +AG ST ++L + A KAGA+A L++ PYY +
Sbjct: 73 THEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYY--NR 130
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLA-HHENIRGVKD-TD 120
+ +Y HF S+A IP+IIYN + + ID++V+T+ L +NI GVKD T
Sbjct: 131 PNQRGLYTHFSSIAKAISIPIIIYN---IPSRSVIDMAVETMRDLCRDFKNIIGVKDATG 187
Query: 121 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
I+ A+ + +F +G L G G I+ S V +L+
Sbjct: 188 KIERASEQREKCGKDFVQLSGDDCTALGFNAHGGVGCISVSSNVAPKLCAQLHAACLCSD 247
Query: 181 WEEAMKLQHRL 191
++ A+KL L
Sbjct: 248 YKTALKLNDLL 258
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI
biosynthesis, diaminopimelate biosynthesis, lyase,
schiff B; 1.45A {Staphylococcus aureus} PDB: 3di1_A
3di0_A
Length = 292
Score = 131 bits (332), Expect = 7e-38
Identities = 50/191 (26%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T +EK I+ T+ K + IAGT T +I + +A GA+A +++ PYY K
Sbjct: 53 TTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYY--NK 110
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
+ + +HF ++AD +PV++YN V TN+ I +T+ L+ H I +KD T++
Sbjct: 111 TNQRGLVKHFEAIADAVKLPVVLYN---VPSRTNMTIEPETVEILSQHPYIVALKDATND 167
Query: 122 I-KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
L + + +F++++G+ ++ G G I+ ++ V+ LYD ++G
Sbjct: 168 FEYLEEVKKRIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGL 227
Query: 181 WEEAMKLQHRL 191
+ +
Sbjct: 228 --DIQDQFKPI 236
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM
barrel, NYSGXRC, PSI-2, structural genomics; 1.90A
{Oceanobacillus iheyensis HTE831}
Length = 314
Score = 131 bits (332), Expect = 1e-37
Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 17/193 (8%)
Query: 8 TEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
T EE ++ + + + T++AG S I+L + A +GA+ +I P +
Sbjct: 63 TIEEAKQVATRVTELVNGRATVVAGI-GYSVDTAIELGKSAIDSGADCVMIHQPVH--PY 119
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNID--ISVDTLVKLAHHENIRGVKD-TDNI 122
+T+ E++ ++ + P IIY D +S D + +LA + + G+K ++I
Sbjct: 120 ITDAGAVEYYRNIIEALDAPSIIY------FKDAHLSDDVIKELAPLDKLVGIKYAINDI 173
Query: 123 KLAN--MANQTKDLNFSVFAGSAGYLLSGLL-VGCAGGINALSAVLGGPICELYDLAKAG 179
+ M K N + G+A G G + L V L + + G
Sbjct: 174 QRVTQVMRAVPKSSNVAFICGTAEKWAPFFYHAGAVGFTSGLVNVFPQKSFALLEALEEG 233
Query: 180 KWEEAMKLQHRLV 192
E+ + +V
Sbjct: 234 NQEKIWDVWEDVV 246
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid
biosynthesis, diaminopimelate biosynthesis, lyase,
lysine biosynthesis; HET: MSE; 1.80A {Campylobacter
jejuni} PDB: 3ler_A*
Length = 301
Score = 130 bits (329), Expect = 2e-37
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 16/193 (8%)
Query: 8 TEEEKLKIISTLRQETKKT---IIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQK 64
T EE I + K T ++AG +T + L + A + GA+ L + PYY
Sbjct: 58 THEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYY--N 115
Query: 65 KMTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLA-HHENIRGVKD-T 119
K T+ +YEH+ ++A + IPV++YN V T +IS DT++KL ENI GVK+ +
Sbjct: 116 KPTQQGLYEHYKAIAQSVDIPVLLYN---VPGRTGCEISTDTIIKLFRDCENIYGVKEAS 172
Query: 120 DNI-KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKA 178
NI K ++ + +G L G G I+ S +L I L A
Sbjct: 173 GNIDKCVDLLAHEPR--MMLISGEDAINYPILSNGGKGVISVTSNLLPDMISALTHFALD 230
Query: 179 GKWEEAMKLQHRL 191
++EA K+ L
Sbjct: 231 ENYKEAKKINDEL 243
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM
barrel, NYSGXRC, PSI2, structural genomics; 1.87A
{Rhodopseudomonas palustris}
Length = 313
Score = 130 bits (329), Expect = 2e-37
Identities = 29/198 (14%), Positives = 64/198 (32%), Gaps = 14/198 (7%)
Query: 4 SFKSTEEEKLKIISTLRQETKK-TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYF 62
+ K E + + + K +I G A L + + AGA +I P
Sbjct: 55 APKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPS- 113
Query: 63 QKKMTEDLIYEHFISVAD--NSPIPVIIYNNTFVTNIDISVDTLVKLAH-HENIRGVK-- 117
T++ I +F + +P ++ + ++ ++ + ++ + +K
Sbjct: 114 --LRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASCVMLKHE 171
Query: 118 DTDNI----KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELY 173
D + L S+ G+ G L + + ++
Sbjct: 172 DWPGLEKITTLRGFQKDGSLRPLSILCGNGGLFLDFEMER-GADGAMTGYCFPDMLVDVV 230
Query: 174 DLAKAGKWEEAMKLQHRL 191
L+KAG+ + A L
Sbjct: 231 KLSKAGQRDLAHNLFDAH 248
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J
protein structure initiative, joint center for
structural G lyase; HET: MCL; 1.80A {Thermotoga
maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Length = 306
Score = 128 bits (324), Expect = 1e-36
Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
E+E+ K++S + I I G ST T+ L ++A K GAN L++ PYY K
Sbjct: 63 NEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY--NK 120
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKL-AHHENIRGVKDT-- 119
T++ +Y+H+ +++ + + +++YN V T +++ +T ++ A +N+ G+ +
Sbjct: 121 PTQEGLYQHYKYISERTDLGIVVYN---VPGRTGVNVLPETAARIAADLKNVVGIXEANP 177
Query: 120 --DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAK 177
D I + +F V++G+ L G G I+ +S V + EL
Sbjct: 178 DIDQIDRTVSLTKQARSDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYF 237
Query: 178 AGKWEEAMKLQHRLV 192
+G E++ ++ +L
Sbjct: 238 SGNLEKSREVHRKLR 252
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex,
pyruvate, lyase; HET: KPI; 1.80A {Azospirillum
brasilense} PDB: 3fkk_A
Length = 309
Score = 124 bits (312), Expect = 7e-35
Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 7/195 (3%)
Query: 4 SFKSTEEEKLKIISTLRQETKK--TIIAGTYCESTRATIDLTQKAAKAGANAALILCPYY 61
F T++E+ + T+ + +I T ST+ + +A + GA + + PY+
Sbjct: 55 QFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH 114
Query: 62 FQKKM-TEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGV--KD 118
E I+E + V+D IP+++ + + E + +
Sbjct: 115 GATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIEQVAYFXIET 174
Query: 119 TDNI-KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAK 177
KL + D + G L L I + + +
Sbjct: 175 PGAANKLRELIRLGGDAIEGPWDGEEAITLLADLHA-GATGAMTGGGFPDGIRPILEAWR 233
Query: 178 AGKWEEAMKLQHRLV 192
G+ ++A +
Sbjct: 234 EGRHDDAYARYQAWL 248
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid
biosynthesis, (S)-lysine biosynthesis VIA DAP PAT
(beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB:
4dpq_A*
Length = 360
Score = 121 bits (306), Expect = 1e-33
Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 24/191 (12%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
+ +E + +I +I I T STR I T++ G +AAL + PYY K
Sbjct: 110 SWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHINPYY--GK 167
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFV---TNIDISVDTLVKLAHHENIRGVKD-TDN 121
+ + + HF SV P IIYN V T DI + KL+ + N+ GVK+ N
Sbjct: 168 TSIEGLIAHFQSVLHMGPT--IIYN---VPGRTGQDIPPRAIFKLSQNPNLAGVKECVGN 222
Query: 122 IKLANMANQTKDLNFSVFAGS-AGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGK 180
++ V++G+ S G G I+ S ++ G + +L +
Sbjct: 223 KRVEEYTEN----GVVVWSGNDDECHDSRWDYGATGVISVTSNLVPGLMRKLMFEGRNS- 277
Query: 181 WEEAMKLQHRL 191
L +L
Sbjct: 278 -----SLNSKL 283
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC
protein structure initiative, midwest center for
structural genomics; 1.20A {Agrobacterium tumefaciens
str}
Length = 294
Score = 118 bits (297), Expect = 8e-33
Identities = 39/187 (20%), Positives = 75/187 (40%), Gaps = 12/187 (6%)
Query: 8 TEEEKLKIISTLRQETKKTI--IAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKK 65
E+ I+S+ + G +S D + +A AGA L+ P YF K
Sbjct: 54 GSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAPPSYF-KN 112
Query: 66 MTEDLIYEHFISVAD---NSPIPVIIYNNTFVTNIDISVDTLVKLA--HHENIRGVKD-T 119
+++D ++ F +V +++YN VT + +SV+ + +L + GVKD +
Sbjct: 113 VSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGVKDSS 172
Query: 120 DNI-KLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKA 178
N + + D ++ G L G+ +G G I+ ++ L + + K
Sbjct: 173 GNWSHTERLLKEHGD--LAILIGDERDLARGVRLGGQGAISGVANFLTQEVRAMAVDGKD 230
Query: 179 GKWEEAM 185
+
Sbjct: 231 DPRIVDL 237
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM
barrel), structural genomics, PSI-2, structure
initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens
str}
Length = 344
Score = 109 bits (275), Expect = 3e-29
Identities = 37/199 (18%), Positives = 77/199 (38%), Gaps = 10/199 (5%)
Query: 8 TEEEKLKIISTLRQETKKTIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKKMT 67
T+E++++ + L + +I GT +T + + A K GA +++ +
Sbjct: 77 TDEQRMEGVERLV-KAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRVL-SRGSV 134
Query: 68 EDLIYEHFISVADNSP-IPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKD---TDNIK 123
HF ++ +P IP +IYN+ + + A H+N+ G K+ +++
Sbjct: 135 IAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEHKNLVGFKEFGGPADMR 194
Query: 124 LANMANQTKDLNFSVFAGSAGYLLSGLL-VGCAGGINALSAV---LGGPICELYDLAKAG 179
A ++D ++ G ++ G + G G I + V +C+L A G
Sbjct: 195 YAAENITSRDDEVTLMIGVDTAVVHGFVNCGATGAITGIGNVLPKEVIHLCKLSQAAAKG 254
Query: 180 KWEEAMKLQHRLVKPDVTL 198
+ + V
Sbjct: 255 DADARARALELEQALAVLS 273
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 48.9 bits (116), Expect = 3e-07
Identities = 39/234 (16%), Positives = 67/234 (28%), Gaps = 91/234 (38%)
Query: 12 KLKIISTLRQETKKTIIAGTY--CESTRATIDLTQ-----KAAKAGANAALILC------ 58
KL + K +I + D +A G NA L+
Sbjct: 107 KLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEG-NAQLVAIFGGQGN 165
Query: 59 -PYYFQKKMTEDL--IYEHFISVADNSPIPVIIYNNTFVTN-IDISVDTLVKLAHHE--- 111
YF E+L +Y+ Y+ V + I S +TL +L
Sbjct: 166 TDDYF-----EELRDLYQ--------------TYH-VLVGDLIKFSAETLSELIRTTLDA 205
Query: 112 --------NIRG-VKDTDN----------------IKLANMANQTKDLNFSVFAGSAGY- 145
NI +++ N I + +A+ + V A G+
Sbjct: 206 EKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAH------YVVTAKLLGFT 259
Query: 146 ------LLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVK 193
L G G + G+ ++AV +A+ WE + +
Sbjct: 260 PGELRSYLKGAT-GHSQGL--VTAVA---------IAETDSWESFFVSVRKAIT 301
Score = 33.5 bits (76), Expect = 0.049
Identities = 15/125 (12%), Positives = 38/125 (30%), Gaps = 43/125 (34%)
Query: 28 IAGTYCESTRATIDL-------TQKAAKAG----ANAALILC-PYYFQKKMTEDLIYE-- 73
+A S + +++ Q A +N +I P +++ +
Sbjct: 1773 LADVM--SIESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVV 1830
Query: 74 --------HFISVA-DNSPIPVIIYNNTFVTNIDIS-----VDTLVKLAHHENIRGVKDT 119
+ + N N +V + +DT+ + + ++ +
Sbjct: 1831 ERVGKRTGWLVEIVNYNVE------NQQYV----AAGDLRALDTVTNVLNFIKLQKI--- 1877
Query: 120 DNIKL 124
D I+L
Sbjct: 1878 DIIEL 1882
Score = 31.9 bits (72), Expect = 0.15
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 35/119 (29%)
Query: 99 ISVDTLVKLAHHENIRGV-------KDTDNIKLANMA--NQTK--------DLNFSV--F 139
+S+++LV++ + RG+ +D M N + L + V
Sbjct: 1777 MSIESLVEVVFY---RGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERV 1833
Query: 140 AGSAGYLLS-------GLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRL 191
G+L+ AG + AL V + + K K + ++LQ L
Sbjct: 1834 GKRTGWLVEIVNYNVENQQYVAAGDLRALDTV-----TNVLNFIKLQK-IDIIELQKSL 1886
Score = 31.6 bits (71), Expect = 0.21
Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 22/104 (21%)
Query: 89 YNNTFVTNIDI-SVDTLVKLAHHENIRGVKDTDNIKLANMANQTKDLNFSVFAGSAGYLL 147
+ N ++ DI ++ KL + VK + IK A F + SA
Sbjct: 91 FENCYLEGNDIHAL--AAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSA---- 144
Query: 148 SGLLVGCAGGINALSAVLGG--PICELYDLAKAGKWEEAMKLQH 189
L G L A+ GG + Y +EE L+
Sbjct: 145 --LFRAVGEGNAQLVAIFGGQGNT-DDY-------FEE---LRD 175
Score = 28.9 bits (64), Expect = 1.3
Identities = 19/86 (22%), Positives = 24/86 (27%), Gaps = 26/86 (30%)
Query: 112 NIRGVKDTDNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSA-VLGGPIC 170
+I + N N V +S LV N V+ GP
Sbjct: 340 SISNLTQEQVQDYVNKTNSHLPAGKQVE-------IS--LV------NGAKNLVVSGPPQ 384
Query: 171 ELYDL------AKAGKWEEAMKLQHR 190
LY L AKA + Q R
Sbjct: 385 SLYGLNLTLRKAKAPSGLD----QSR 406
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein
structure initiati YORK structural genomics research
consortium; 2.50A {Sinorhizobium meliloti}
Length = 396
Score = 39.6 bits (92), Expect = 3e-04
Identities = 14/94 (14%), Positives = 26/94 (27%), Gaps = 13/94 (13%)
Query: 37 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYN--NTFV 94
A + G L+ + + V PVII+ F
Sbjct: 137 AAYESQIEAIEAEGGRIILMASRALAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLGEMFD 196
Query: 95 ---------TNIDISVDTLVKL--AHHENIRGVK 117
+ ++ T + + AH + G+K
Sbjct: 197 PALEGYWGNADHMAAMKTCLDVLEAHAAKVDGIK 230
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 29.4 bits (65), Expect = 0.82
Identities = 20/122 (16%), Positives = 34/122 (27%), Gaps = 47/122 (38%)
Query: 8 TEEEKLKI--------ISTLRQETKKT------IIAGTYCESTR---ATIDLTQKAAKAG 50
T +E + L +E T IIA ES R AT D +
Sbjct: 299 TPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA----ESIRDGLATWDNWKHVNCDK 354
Query: 51 ANAAL-----ILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLV 105
+ +L P ++K +++ + F + I L
Sbjct: 355 LTTIIESSLNVLEPAEYRK------MFDRL----------SV-----FPPSAHIPTILLS 393
Query: 106 KL 107
+
Sbjct: 394 LI 395
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase,
[4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM
MD0; 1.50A {Methanosarcina barkeri}
Length = 350
Score = 28.0 bits (63), Expect = 1.9
Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 5/76 (6%)
Query: 8 TEEEKLKIISTLRQETKKTIIAGTYCESTRATIDLTQKAAKAGANAALILCPYYFQKKMT 67
+ +LKIIS LR K +I + ID AGAN + ++
Sbjct: 254 SNLSELKIISVLRLMFPKRLIPAS---LDLEGIDGMVLRLNAGANI--VTSILPPDSQLE 308
Query: 68 EDLIYEHFISVADNSP 83
Y+ + D
Sbjct: 309 GVANYDRDLEERDRDI 324
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein;
2.60A {Homo sapiens} PDB: 3e73_A*
Length = 411
Score = 27.1 bits (59), Expect = 4.2
Identities = 16/89 (17%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 107 LAHHENIRGVKDTDNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLG 166
L H N + +L ++ + G GY+ + L V G+ +
Sbjct: 132 LYHKMNNEKQAEDCITRLIHLNKIDPHAPNEMLYGRIGYIYALLFVNKNFGVEKIPQSHI 191
Query: 167 GPICEL-----YDLAKAGKWEEAMKLQHR 190
ICE +LA+ + L +
Sbjct: 192 QQICETILTSGENLARKRNFTAKSPLMYE 220
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding
protein; HET: PLM; 2.50A {Bacillus subtilis}
Length = 315
Score = 26.9 bits (60), Expect = 5.3
Identities = 6/41 (14%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVK 106
+ +++ +H I + P+ V+ T+ I++ + +
Sbjct: 47 IPKEMREQHQIHMI---PLQVVFREETYREEIELDWKSFYE 84
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding
protein, lipid binding protein, PSI, structural
genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Length = 282
Score = 26.4 bits (59), Expect = 7.0
Identities = 8/41 (19%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVK 106
+ +LI I+V P+ V+I + + N +
Sbjct: 17 IEPELIKALDITVV---PLSVMIDSKLYSDNDLKEEGHFLS 54
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty
acid synthase, acyl-carrier-protein, beta-ketoacyl RED
beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces
cerevisiae}
Length = 1688
Score = 26.4 bits (58), Expect = 7.8
Identities = 11/51 (21%), Positives = 16/51 (31%), Gaps = 10/51 (19%)
Query: 125 ANMANQTKDLN--FSVFAGSAGYLLS--------GLLVGCAGGINALSAVL 165
AN N++ +N S G + G G AG A+
Sbjct: 1349 ANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQ 1399
>2dt8_A DEGV family protein; fatty acid binding, structural genomics,
NPPSFA, natio project on protein structural and
functional analyses; HET: PLM; 1.48A {Thermus
thermophilus}
Length = 280
Score = 26.0 bits (58), Expect = 8.2
Identities = 6/41 (14%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVK 106
+ +DL + V P+ V + + +I+ + +
Sbjct: 13 LPQDLRGRLGVRVV---PLYVNLSGAIYRDWEEITPTEIFQ 50
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid
binding, protei structure initiative; HET: ELA; 2.65A
{Streptococcus agalactiae}
Length = 285
Score = 26.0 bits (58), Expect = 8.9
Identities = 8/41 (19%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 66 MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVK 106
+ E + + V IP+II T++ ++++D
Sbjct: 16 LPEAIENHEDVYVL---DIPIIIDGKTYIEGQNLTLDQYYD 53
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.133 0.378
Gapped
Lambda K H
0.267 0.0742 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,931,548
Number of extensions: 169660
Number of successful extensions: 588
Number of sequences better than 10.0: 1
Number of HSP's gapped: 472
Number of HSP's successfully gapped: 60
Length of query: 198
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 109
Effective length of database: 4,216,824
Effective search space: 459633816
Effective search space used: 459633816
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (24.9 bits)