BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9715
(92 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RFH0|ATP5L_PONAB ATP synthase subunit g, mitochondrial OS=Pongo abelii GN=ATP5L PE=3
SV=1
Length = 103
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%)
Query: 4 LVSGVVAASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAW 63
LV+ V SKP LA F +Y KVEL+PP P+E G+ +V+ A++G +K LTVKEA
Sbjct: 15 LVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQGLKKIVNSAQTGSFKQLTVKEAV 74
Query: 64 LNSLIAAEITFWFYVGEVIGKRSLIGYEV 92
LN L+A E+ WFYVGE+IGKR +IGY+V
Sbjct: 75 LNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>sp|Q28852|ATP5L_BOVIN ATP synthase subunit g, mitochondrial OS=Bos taurus GN=ATP5L PE=1
SV=3
Length = 103
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%)
Query: 4 LVSGVVAASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAW 63
LV+ V SKP LA F +Y KVEL+PP P+E + +++ AK+G +K LTVKEA
Sbjct: 15 LVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPTAIQSLKKIINSAKTGSFKQLTVKEAL 74
Query: 64 LNSLIAAEITFWFYVGEVIGKRSLIGYEV 92
LN L+A E+ WFYVGE+IGKR +IGY+V
Sbjct: 75 LNGLVATEVWMWFYVGEIIGKRGIIGYDV 103
>sp|O75964|ATP5L_HUMAN ATP synthase subunit g, mitochondrial OS=Homo sapiens GN=ATP5L PE=1
SV=3
Length = 103
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/89 (52%), Positives = 62/89 (69%)
Query: 4 LVSGVVAASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAW 63
LV+ V SKP LA F +Y KVEL+PP P+E + +V+ A++G +K LTVKEA
Sbjct: 15 LVNAAVTYSKPRLATFWYYAKVELVPPTPAEIPRAIQSLKKIVNSAQTGSFKQLTVKEAV 74
Query: 64 LNSLIAAEITFWFYVGEVIGKRSLIGYEV 92
LN L+A E+ WFYVGE+IGKR +IGY+V
Sbjct: 75 LNGLVATEVLMWFYVGEIIGKRGIIGYDV 103
>sp|Q9CPQ8|ATP5L_MOUSE ATP synthase subunit g, mitochondrial OS=Mus musculus GN=Atp5l PE=1
SV=1
Length = 103
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%)
Query: 4 LVSGVVAASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAW 63
+V+ V SKP LA F HY KVEL+PP P+E + ++ AK+G +K+LTVKEA
Sbjct: 15 MVAAAVTYSKPRLATFWHYAKVELVPPTPAEIPTAIQSVKKIIQSAKTGSFKHLTVKEAV 74
Query: 64 LNSLIAAEITFWFYVGEVIGKRSLIGYEV 92
LN L+A E+ WFY+GE+IGKR ++GY+V
Sbjct: 75 LNGLVATEVWMWFYIGEIIGKRGIVGYDV 103
>sp|Q6PDU7|ATP5L_RAT ATP synthase subunit g, mitochondrial OS=Rattus norvegicus GN=Atp5l
PE=1 SV=2
Length = 103
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 61/89 (68%)
Query: 4 LVSGVVAASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAW 63
+V+ V SKP LA F HY +VEL+PP E + ++H A++G +K+LTVKEA
Sbjct: 15 MVAAAVTYSKPRLATFWHYARVELVPPTLGEIPTAIQSMKSIIHSAQTGNFKHLTVKEAV 74
Query: 64 LNSLIAAEITFWFYVGEVIGKRSLIGYEV 92
LN L+A E+ WFY+GE+IGKR ++GY+V
Sbjct: 75 LNGLVATEVWMWFYIGEIIGKRGIVGYDV 103
>sp|Q7Z4Y8|AT5L2_HUMAN ATP synthase subunit g 2, mitochondrial OS=Homo sapiens GN=ATP5L2
PE=5 SV=1
Length = 100
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 55/86 (63%)
Query: 4 LVSGVVAASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAW 63
LV+ V KP LA F +Y VEL+PP P+E + +V A++G +K LTVKEA
Sbjct: 15 LVNAAVTYLKPRLAAFWYYTTVELVPPTPAEIPRAIQSLKKIVSSAQTGSFKQLTVKEAL 74
Query: 64 LNSLIAAEITFWFYVGEVIGKRSLIG 89
LN L+A E++ WFYV E+ GKR +IG
Sbjct: 75 LNGLVATEVSTWFYVREITGKRGIIG 100
>sp|Q18803|ATPL2_CAEEL Probable ATP synthase subunit g 2, mitochondrial OS=Caenorhabditis
elegans GN=asg-2 PE=3 SV=1
Length = 131
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 23 GKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSLIAAEITFWFYVGEVI 82
GK EL PP+ +++ AIK A V ++GG+KNL+++E + + + E+ FWF+VGE+I
Sbjct: 38 GKHELAPPRQADWPAIKADWAKVQSFIQTGGYKNLSIREGLVYTAVTLEVVFWFFVGEMI 97
Query: 83 GKRSLIGYEV 92
G+R + GY V
Sbjct: 98 GRRYIFGYLV 107
>sp|P90921|ATPL1_CAEEL Probable ATP synthase subunit g 1, mitochondrial OS=Caenorhabditis
elegans GN=asg-1 PE=3 SV=1
Length = 131
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 23 GKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSLIAAEITFWFYVGEVI 82
GK EL PP+ ++ AIK A + ++ + NL++KE+ + S +A E+ FWF+VGE+I
Sbjct: 38 GKHELAPPRSADIPAIKADWAKLQKFIETKQYVNLSIKESLVYSAVALEVVFWFFVGEMI 97
Query: 83 GKRSLIGY 90
G+R + GY
Sbjct: 98 GRRYIFGY 105
>sp|B1M0N0|SYA_METRJ Alanine--tRNA ligase OS=Methylobacterium radiotolerans (strain ATCC
27329 / DSM 1819 / JCM 2831) GN=alaS PE=3 SV=1
Length = 892
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
Query: 31 KPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSLIAAEITFWFYVGEVIGKRSLIGY 90
K G D A + + K +EAW S AA T WF + E +G +GY
Sbjct: 407 KARGIGVDTDAFAAAMQRQKQAA------REAWKGSGEAATETVWFGLRERVGATEFLGY 460
Query: 91 E 91
E
Sbjct: 461 E 461
>sp|Q12233|ATPN_YEAST ATP synthase subunit g, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ATP20 PE=1 SV=1
Length = 115
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 18/105 (17%)
Query: 5 VSGVVAASKPILANFLHYGKVE------------LIPPKPSEFGAI-----KDGIAHVVH 47
SG+V+ + + + L+YGKV L PP ++F ++ K + +
Sbjct: 9 TSGLVSKANLLSSKALYYGKVGAEISKQIYLKEGLQPPTVAQFKSVYSNLYKQSLNFALK 68
Query: 48 QAKS-GGWKNLTVKEAWLNSLIAAEITFWFYVGEVIGKRSLIGYE 91
+ KN+ E ++ ++ VGE+IG+R L+GY+
Sbjct: 69 PTEVLSCLKNIQKNELLKYGAYGIQLIGFYSVGEIIGRRKLVGYK 113
>sp|Q9Y666|S12A7_HUMAN Solute carrier family 12 member 7 OS=Homo sapiens GN=SLC12A7 PE=1
SV=3
Length = 1083
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 19/27 (70%)
Query: 37 AIKDGIAHVVHQAKSGGWKNLTVKEAW 63
+++DG++H++ A GG K+ TV AW
Sbjct: 769 SLRDGMSHLIQSAGLGGLKHNTVLMAW 795
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,168,064
Number of Sequences: 539616
Number of extensions: 1252237
Number of successful extensions: 2686
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2675
Number of HSP's gapped (non-prelim): 14
length of query: 92
length of database: 191,569,459
effective HSP length: 62
effective length of query: 30
effective length of database: 158,113,267
effective search space: 4743398010
effective search space used: 4743398010
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)