Query psy9715
Match_columns 92
No_of_seqs 105 out of 206
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 17:46:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9715.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9715hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nrw_A Phage integrase/site-sp 50.9 21 0.00072 21.6 3.9 47 16-65 13-62 (117)
2 1bh9_B TAFII28; histone fold, 38.3 55 0.0019 20.5 4.4 18 65-82 37-54 (89)
3 4b3n_A Maltose-binding peripla 36.3 75 0.0026 25.1 5.9 54 11-67 326-379 (602)
4 3dm0_A Maltose-binding peripla 31.0 1.6E+02 0.0053 22.8 6.7 58 11-71 312-369 (694)
5 4exk_A Maltose-binding peripla 30.5 1.6E+02 0.0054 22.6 6.7 55 11-68 316-370 (487)
6 4h1g_A Maltose binding protein 29.4 1.1E+02 0.0037 25.0 5.9 54 11-67 313-366 (715)
7 3u9z_C Ciboulot, isoform A; co 26.1 35 0.0012 20.3 1.8 27 29-55 5-31 (58)
8 3oai_A Maltose-binding peripla 25.9 1.6E+02 0.0056 21.6 5.9 54 11-67 312-365 (507)
9 3py7_A Maltose-binding peripla 24.6 2.3E+02 0.008 21.5 6.7 54 11-67 313-366 (523)
10 3o3u_N Maltose-binding peripla 24.4 2.2E+02 0.0077 21.2 6.6 58 11-71 312-369 (581)
11 3ob4_A Conglutin, maltose ABC 23.8 2.1E+02 0.007 21.8 6.2 54 11-67 312-365 (500)
12 3n94_A Fusion protein of malto 23.5 2.3E+02 0.0078 21.0 6.7 54 11-67 314-367 (475)
13 2o6n_A RH4B designed peptide; 21.1 87 0.003 16.5 2.5 28 10-41 5-32 (35)
14 2og0_A Excisionase; protein-DN 20.7 74 0.0025 18.0 2.4 24 5-28 5-30 (52)
15 1v4p_A Alanyl-tRNA synthetase; 20.5 84 0.0029 20.4 3.0 37 28-64 48-84 (157)
16 1vig_A Vigilin; RNA-binding pr 20.3 31 0.0011 20.0 0.7 10 77-86 15-24 (71)
No 1
>3nrw_A Phage integrase/site-specific recombinase; alpha-helical domain, structural genomics, PSI-2, protein ST initiative; 1.70A {Haloarcula marismortui}
Probab=50.93 E-value=21 Score=21.62 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=25.0
Q ss_pred HHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhh-C--CCccccHHHHHHH
Q psy9715 16 LANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKS-G--GWKNLTVKEAWLN 65 (92)
Q Consensus 16 ~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~-~--~~k~lt~~ea~~~ 65 (92)
+..|+.|.+.++.|-| +..-..++..++..... + .+.++|..+.-.+
T Consensus 13 ~~~fl~~l~~~~s~~T---i~~Y~~~l~~f~~~l~~~~~~~l~~it~~~i~~y 62 (117)
T 3nrw_A 13 RDRYLAHRQTDAADAS---IKSFRYRLKHFVEWAEERDITAMRELTGWKLDEY 62 (117)
T ss_dssp HHHHHHHHTTTSCHHH---HHHHHHHHHHHHHHHHHTTCCSGGGCCHHHHHHH
T ss_pred HHHHHHHHHcCCCHHH---HHHHHHHHHHHHHHHHHcCCCChHHCCHHHHHHH
Confidence 5667777775564444 33444444444444432 2 4566776665443
No 2
>1bh9_B TAFII28; histone fold, tata binding protein, transcription regulation complex; HET: PMB; 2.60A {Homo sapiens} SCOP: a.22.1.3 PDB: 1bh8_B*
Probab=38.30 E-value=55 Score=20.52 Aligned_cols=18 Identities=39% Similarity=0.453 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhhhhhc
Q psy9715 65 NSLIAAEITFWFYVGEVI 82 (92)
Q Consensus 65 ~~l~~~Ev~gwF~VGEiI 82 (92)
+.+.++--++.-||||+|
T Consensus 37 ~v~i~v~glaKvfVgelV 54 (89)
T 1bh9_B 37 NVVIAMSGISKVFVGEVV 54 (89)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 456778888999999997
No 3
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=36.30 E-value=75 Score=25.07 Aligned_cols=54 Identities=26% Similarity=0.270 Sum_probs=37.8
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSL 67 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l 67 (92)
...|.++.|...++..-..|+..++.++.+.+...++.+-+| +.|++||+..+-
T Consensus 326 ~~dp~~~~~~e~~~~a~~~P~~p~~~~i~~~l~~~l~~vl~G---~~tpeeAl~~aq 379 (602)
T 4b3n_A 326 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDEALKDAQ 379 (602)
T ss_dssp TTSHHHHHHHHHHHHSEECCCSTTHHHHHHHHHHHHHHHHTT---SSCHHHHHHHHH
T ss_pred hhChHHHHHHHHHhhCeecCCCCCHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHH
Confidence 345888888887776655666667777777777666666554 578888877653
No 4
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=30.95 E-value=1.6e+02 Score=22.79 Aligned_cols=58 Identities=24% Similarity=0.231 Sum_probs=41.8
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSLIAAE 71 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l~~~E 71 (92)
...|.++.|...+...-..|+..++..+...+.+.++.+-+| +.+++||+..+.-.++
T Consensus 312 ~~~p~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~G---~~~~~~al~~a~~~~~ 369 (694)
T 3dm0_A 312 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDAALAAAQTNAA 369 (694)
T ss_dssp TTSHHHHHHHHHHHHSEECCCSTHHHHHHHHHHHHHHHHHHT---SSCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHhccCccCCCchhHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHHHhhh
Confidence 356888999888877766677778888877777777666554 3688888877654443
No 5
>4exk_A Maltose-binding periplasmic protein, uncharacteri protein chimera; MCSG, pcsep, MBP-fused target, structural genomics; HET: MTT; 1.28A {Escherichia coli} PDB: 3g7v_A* 3g7w_A* 3sev_A* 3ser_A* 3sew_A* 3set_A* 3ses_A* 3seu_A* 3sex_A* 3sey_A* 3q27_A* 3q28_A* 3q26_A* 3q25_A* 3q29_A* 1nmu_A* 2ok2_A* 3pgf_A* 1t0k_A* 3rum_A* ...
Probab=30.51 E-value=1.6e+02 Score=22.61 Aligned_cols=55 Identities=24% Similarity=0.230 Sum_probs=39.2
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSLI 68 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l~ 68 (92)
..-|.++.|...++..-..|+..++..+.+.+...++.+-+| +.|++||+..+--
T Consensus 316 ~~dp~~~~~~e~~~~a~~~P~~p~~~~v~~~l~~al~~vl~G---~~tpeeAL~~aq~ 370 (487)
T 4exk_A 316 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDAALAAAQT 370 (487)
T ss_dssp TTSHHHHHHHHHHHHSEECCCSTTHHHHHHHHHHHHHHHHTT---SSCHHHHHHHHHH
T ss_pred hhChHHHHHHHHHhcCccCCCCcCHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHHH
Confidence 345888888877766655677667888777777777766555 4688888876543
No 6
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=29.42 E-value=1.1e+02 Score=25.01 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=38.0
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSL 67 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l 67 (92)
..-|.++.|...++..-..|...++.++.+.+...++.+-+| +.|++||+..+-
T Consensus 313 ~~dp~~~~~~e~~~~a~~~P~~p~~~~v~~~l~~al~~vl~G---~~tpeeAL~~Aq 366 (715)
T 4h1g_A 313 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDAALAAAQ 366 (715)
T ss_dssp TTCHHHHHHHHHHHHSEECCCSTTHHHHHHHHHHHHHHHHTT---SSCHHHHHHHHH
T ss_pred hhChHHHHHHHHHhcCeeCCCCCchHHHHHHHHHHHHHHHcC---CCCHHHHHHHHH
Confidence 345888888887776655566667777777777666666554 578888887654
No 7
>3u9z_C Ciboulot, isoform A; contractIle protein, protein binding; HET: ADP; 2.09A {Drosophila melanogaster} PDB: 1sqk_B*
Probab=26.08 E-value=35 Score=20.32 Aligned_cols=27 Identities=7% Similarity=0.197 Sum_probs=21.3
Q ss_pred CCChhhHHHHHHHHHHHHHHhhhCCCc
Q psy9715 29 PPKPSEFGAIKDGIAHVVHQAKSGGWK 55 (92)
Q Consensus 29 PPs~ae~~~i~~~~~~~~~~~~~~~~k 55 (92)
-|++.|.|.+-.++...+.+....+++
T Consensus 5 ~~~lkdlpkv~~~l~~eie~Fdk~kLK 31 (58)
T 3u9z_C 5 APALKDLPKVAENLKSQLEGFDKSKLK 31 (58)
T ss_pred ccchhhhhhhHHHHHHHHHhcChhhcc
Confidence 477889999999998888777765554
No 8
>3oai_A Maltose-binding periplasmic protein, myelin prote; schwann cell membrane protein, immunoglobulin-folding, inter adhesion, tetramer; HET: MAL; 2.10A {Escherichia coli}
Probab=25.89 E-value=1.6e+02 Score=21.64 Aligned_cols=54 Identities=26% Similarity=0.270 Sum_probs=35.9
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSL 67 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l 67 (92)
...|.++.|...++.....|...++..+.+.+...++.+-+| +.+.+||+....
T Consensus 312 ~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g---~~~~~~al~~~~ 365 (507)
T 3oai_A 312 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDEALKDAQ 365 (507)
T ss_dssp TTCHHHHHHHHHHHHSEECCCSTTHHHHHHHHHHHHHHHHTT---SSCHHHHHHHHH
T ss_pred hhChHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHH
Confidence 356888888877776666666666677666666666666554 357777766543
No 9
>3py7_A Maltose-binding periplasmic protein,paxillin LD1, chimera; viral protein; HET: MLR; 2.29A {Escherichia coli}
Probab=24.61 E-value=2.3e+02 Score=21.52 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=38.1
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSL 67 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l 67 (92)
...|.++.|...+...-..|...++..+.+.+.+.++.+-+| +.|++||+....
T Consensus 313 ~~~p~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~~~~~G---~~t~eeal~~~~ 366 (523)
T 3py7_A 313 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDAALAAAQ 366 (523)
T ss_dssp TTSHHHHHHHHHHHTSEECCCSTTHHHHHHHHHHHHHHHHHT---SSCHHHHHHHHH
T ss_pred hhChHHHHHHHHHhcCccCCCCccHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHH
Confidence 356888888888776666666667777777777777766665 467788776653
No 10
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=24.36 E-value=2.2e+02 Score=21.24 Aligned_cols=58 Identities=24% Similarity=0.231 Sum_probs=39.4
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSLIAAE 71 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l~~~E 71 (92)
...|.++.|...++.....|...++..+.+.+...++.+-+| +.+.+||+....--++
T Consensus 312 ~~~p~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g---~~~~~~al~~~~~~~~ 369 (581)
T 3o3u_N 312 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDAALAAAQTNAA 369 (581)
T ss_dssp TTCHHHHHHHHHHTTSEECCCSTTHHHHHHHHHHHHHHHHHT---SSCHHHHHHHHHHHHH
T ss_pred hcChHHHHHHHHhhcCccCCCCccHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHHHHHH
Confidence 356888888887776655666666777767776667666565 4688888876554443
No 11
>3ob4_A Conglutin, maltose ABC transporter periplasmic protein, ARAH; alpha-amylase inhibitors (AAI), lipid transfer (LT) and SEED (SS) protein family; HET: MLR; 2.71A {Escherichia coli}
Probab=23.79 E-value=2.1e+02 Score=21.79 Aligned_cols=54 Identities=24% Similarity=0.238 Sum_probs=37.6
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSL 67 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l 67 (92)
...|.++.|...++.....|...++..+.+.+...++.+-+| +.|.+||+....
T Consensus 312 ~~~p~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~i~~vl~G---~~t~eeAl~~~~ 365 (500)
T 3ob4_A 312 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDAALAAAQ 365 (500)
T ss_dssp TTSHHHHHHHHHHHHSEECCCSTHHHHHHHHHHHHHHHHHHT---SSCHHHHHHHHH
T ss_pred hhChhHHHHHHHHhcCccCCCCCcHHHHHHHHHHHHHHHHcC---CCCHHHHHHHHH
Confidence 356888888888877666676666777777777667666555 457777776554
No 12
>3n94_A Fusion protein of maltose-binding periplasmic Pro pituitary adenylate cyclase 1 receptor-short...; G-protein coupled receptor; HET: MAL; 1.80A {Escherichia coli} PDB: 3ehs_A* 3ehu_A* 3eht_A* 3n93_A* 3n95_A* 3n96_A*
Probab=23.49 E-value=2.3e+02 Score=21.04 Aligned_cols=54 Identities=26% Similarity=0.270 Sum_probs=36.8
Q ss_pred hccchHHHHHHHhhhccCCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHHHHH
Q psy9715 11 ASKPILANFLHYGKVELIPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWLNSL 67 (92)
Q Consensus 11 ~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~~~l 67 (92)
...|.++.|...++.....|...++..+.+.+...++.+-+| +.+.+||+....
T Consensus 314 ~~~p~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~~~G---~~t~eeal~~~~ 367 (475)
T 3n94_A 314 AKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASG---RQTVDEALKDAQ 367 (475)
T ss_dssp TTCHHHHHHHHHHHHSEECCCSTTHHHHHHHHHHHHHHHHHT---SSCHHHHHHHHH
T ss_pred hhChHHHHHHHHHhcCccCCCCccHHHHHHHHHHHHHHHHhC---CCCHHHHHHHHH
Confidence 356888888888776666666666777766676666666555 357777776544
No 13
>2o6n_A RH4B designed peptide; right-handed, tetramer, de novo protein; HET: CGU; 1.10A {Synthetic} SCOP: k.17.1.1 PDB: 1tgg_A*
Probab=21.09 E-value=87 Score=16.52 Aligned_cols=28 Identities=21% Similarity=0.235 Sum_probs=14.1
Q ss_pred HhccchHHHHHHHhhhccCCCChhhHHHHHHH
Q psy9715 10 AASKPILANFLHYGKVELIPPKPSEFGAIKDG 41 (92)
Q Consensus 10 ~~~~P~~~~f~~Y~k~eL~PPs~ae~~~i~~~ 41 (92)
.+++-..+-..+-+|||. +.|+..+.+.
T Consensus 5 eqakkeiaylikkakeei----leeikkakqe 32 (35)
T 2o6n_A 5 EQAKKEIAYLIKKAKEEI----LEEIKKAKQE 32 (35)
T ss_dssp HHHHHHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 344444444555556655 5555544443
No 14
>2og0_A Excisionase; protein-DNA complex, DNA architectural protein, 'winged'HELI protein, phage excision; 1.90A {Enterobacteria phage lambda} SCOP: a.6.1.7 PDB: 1lx8_A 1rh6_A 2ief_A
Probab=20.68 E-value=74 Score=17.97 Aligned_cols=24 Identities=13% Similarity=0.026 Sum_probs=18.1
Q ss_pred HHhHHHhc--cchHHHHHHHhhhccC
Q psy9715 5 VSGVVAAS--KPILANFLHYGKVELI 28 (92)
Q Consensus 5 ~~~~~~~~--~P~~~~f~~Y~k~eL~ 28 (92)
+...+++- +|...|..+|++++..
T Consensus 5 l~EwA~~~~~~~s~~Tl~r~ar~G~I 30 (52)
T 2og0_A 5 LQEWNARQRRPRSLETVRRWVRESRI 30 (52)
T ss_dssp HHHHHHTSSSCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCCHHHHHHHHHCCCC
Confidence 34455555 7888999999998887
No 15
>1v4p_A Alanyl-tRNA synthetase; alanine-tRNA ligase, riken structural genomics/proteomics initiative RSGI, structural genomics; 1.45A {Pyrococcus horikoshii} SCOP: d.67.1.2 PDB: 1wxo_A 1v7o_A 1wnu_A 3rhu_A 3rfn_A
Probab=20.51 E-value=84 Score=20.38 Aligned_cols=37 Identities=19% Similarity=0.053 Sum_probs=27.4
Q ss_pred CCCChhhHHHHHHHHHHHHHHhhhCCCccccHHHHHH
Q psy9715 28 IPPKPSEFGAIKDGIAHVVHQAKSGGWKNLTVKEAWL 64 (92)
Q Consensus 28 ~PPs~ae~~~i~~~~~~~~~~~~~~~~k~lt~~ea~~ 64 (92)
.|+|.+|++.+.+..+++++.-..=....++.+||..
T Consensus 48 ~~~t~e~l~~IE~~~n~~I~~~~pi~~~~~~~~eA~~ 84 (157)
T 1v4p_A 48 RKPSDEEIREIERLANEKVKENAPIKIYELPREEAEK 84 (157)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTCBCEEEEEEHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCEEEEEeCHHHHHH
Confidence 4788899999988888877654333456788888876
No 16
>1vig_A Vigilin; RNA-binding protein, ribonucleoprotein; NMR {Homo sapiens} SCOP: d.51.1.1 PDB: 1vih_A
Probab=20.26 E-value=31 Score=20.03 Aligned_cols=10 Identities=30% Similarity=0.610 Sum_probs=8.0
Q ss_pred hhhhhcccCc
Q psy9715 77 YVGEVIGKRS 86 (92)
Q Consensus 77 ~VGEiIGRr~ 86 (92)
++|.+|||+.
T Consensus 15 ~ig~iIG~gG 24 (71)
T 1vig_A 15 FHRHLIGKSG 24 (71)
T ss_dssp HHHHHTCSSC
T ss_pred HhhhhcCCCC
Confidence 4789999973
Done!