BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy9717
(127 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBG4|HES1_BOVIN Transcription factor HES-1 OS=Bos taurus GN=HES1 PE=2 SV=1
Length = 280
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + +TDP VL K
Sbjct: 50 INESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGFSEC EV RF
Sbjct: 110 YRAGFSECMNEVTRF 124
>sp|Q14469|HES1_HUMAN Transcription factor HES-1 OS=Homo sapiens GN=HES1 PE=1 SV=1
Length = 280
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + +TDP VL K
Sbjct: 50 INESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGFSEC EV RF
Sbjct: 110 YRAGFSECMNEVTRF 124
>sp|Q04666|HES1_RAT Transcription factor HES-1 OS=Rattus norvegicus GN=Hes1 PE=1 SV=1
Length = 281
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + +TDP VL K
Sbjct: 50 INESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGFSEC EV RF
Sbjct: 110 YRAGFSECMNEVTRF 124
>sp|P35428|HES1_MOUSE Transcription factor HES-1 OS=Mus musculus GN=Hes1 PE=1 SV=1
Length = 282
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + +TDP VL K
Sbjct: 50 INESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALSTDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGFSEC EV RF
Sbjct: 110 YRAGFSECMNEVTRF 124
>sp|Q6IRB2|HES1A_XENLA Transcription factor HES-1-A OS=Xenopus laevis GN=hes1-a PE=1 SV=1
Length = 267
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q++ + +TDP VL K
Sbjct: 50 INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMSAALSTDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGFSEC EV RF
Sbjct: 110 YRAGFSECMNEVTRF 124
>sp|Q8AVU4|HES1B_XENLA Transcription factor HES-1-B OS=Xenopus laevis GN=hes1-b PE=2 SV=1
Length = 267
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + +TDP VL K
Sbjct: 50 INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSTDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGFSEC EV RF
Sbjct: 110 YRAGFSECMNEVTRF 124
>sp|Q5PPM5|HES1_XENTR Transcription factor HES-1 OS=Xenopus tropicalis GN=hes1 PE=2 SV=1
Length = 267
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + +TDP VL K
Sbjct: 50 INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSTDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGFSEC EV RF
Sbjct: 110 YRAGFSECMNEVTRF 124
>sp|Q26263|DPN_DROME Protein deadpan OS=Drosophila melanogaster GN=dpn PE=1 SV=2
Length = 435
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 37/56 (66%), Positives = 47/56 (83%)
Query: 57 PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNKFRAGFSECAGEVGRF 112
PARH+KLEKADILEMTVKHL+++QRQQL ++ +DP V+ KF+ GF ECA EV R+
Sbjct: 75 PARHTKLEKADILEMTVKHLQSVQRQQLNMAIQSDPSVVQKFKTGFVECAEEVNRY 130
>sp|O57337|HES1_CHICK Transcription factor HES-1 OS=Gallus gallus GN=HES1 PE=2 SV=1
Length = 290
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 51/68 (75%)
Query: 45 VQLLCLLFLLLQPARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNKFRAGFSE 104
+++L L L +RHSKLEKADILEMTVKHL N+QR Q+A + + DP VL K+RAGF+E
Sbjct: 58 LKMLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMAAALSADPSVLGKYRAGFNE 117
Query: 105 CAGEVGRF 112
C EV RF
Sbjct: 118 CMNEVTRF 125
>sp|Q90Z12|HES4A_XENLA Transcription factor HES-4-A OS=Xenopus laevis GN=hes4-a PE=1 SV=2
Length = 281
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + +DP VL K
Sbjct: 50 INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALTSDPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGF+EC EV RF
Sbjct: 110 YRAGFNECTNEVTRF 124
>sp|Q90VV1|HES4B_XENLA Transcription factor HES-4-B OS=Xenopus laevis GN=hes4-b PE=1 SV=1
Length = 277
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + DP VL K
Sbjct: 50 INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALTADPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGF+EC EV RF
Sbjct: 110 YRAGFNECMNEVTRF 124
>sp|Q6PBD4|HES4_XENTR Transcription factor HES-4 OS=Xenopus tropicalis GN=hes4 PE=2 SV=1
Length = 281
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 40 LKRHLVQLLCLLFLLLQ--PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK 97
+ L QL L+ L+ +RHSKLEKADILEMTVKHL N+QR Q+ + DP VL K
Sbjct: 50 INESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALTADPSVLGK 109
Query: 98 FRAGFSECAGEVGRF 112
+RAGF+EC EV RF
Sbjct: 110 YRAGFNECMNEVTRF 124
>sp|P29303|HAIR_DROVI Protein hairy OS=Drosophila virilis GN=h PE=2 SV=1
Length = 378
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/59 (71%), Positives = 50/59 (84%)
Query: 57 PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNKFRAGFSECAGEVGRFPGL 115
PARHSKLEKADILE TVKHL+ +QRQQ A+ A DP ++NKF+AGF++CA EV RFPGL
Sbjct: 72 PARHSKLEKADILEKTVKHLQELQRQQAAMQQAADPKIINKFKAGFADCANEVSRFPGL 130
>sp|P14003|HAIR_DROME Protein hairy OS=Drosophila melanogaster GN=h PE=1 SV=2
Length = 337
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 49/60 (81%)
Query: 57 PARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNKFRAGFSECAGEVGRFPGLH 116
PARHSKLEKADILE TVKHL+ +QRQQ A+ A DP ++NKF+AGF++C EV RFPG+
Sbjct: 66 PARHSKLEKADILEKTVKHLQELQRQQAAMQQAADPKIVNKFKAGFADCVNEVSRFPGIE 125
>sp|Q9HCC6|HES4_HUMAN Transcription factor HES-4 OS=Homo sapiens GN=HES4 PE=1 SV=1
Length = 221
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 2/107 (1%)
Query: 6 CASTAPDDLMFHIGHVIEIQQVFCKMQIICSSKTLKRHLVQLLCLLFLLLQPARHSKLEK 65
AS PD H + V K + +++L + ++ L L L + +RHSKLEK
Sbjct: 20 SASRTPDKPRSAAEHRKSSKPVMEKRRRARINESLAQ--LKTLILDALRKESSRHSKLEK 77
Query: 66 ADILEMTVKHLENMQRQQLALSAATDPHVLNKFRAGFSECAGEVGRF 112
ADILEMTV+HL +++R Q+ + + DP VL K+RAGF EC EV RF
Sbjct: 78 ADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRF 124
>sp|Q01071|ESMD_DROME Enhancer of split mdelta protein OS=Drosophila melanogaster
GN=HLHmdelta PE=1 SV=1
Length = 173
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN--KFRAGFSECAGEVGRF----PG 114
SKLEKADILE+TV +L+ Q+Q++A + P +N KFRAG+++ A EV PG
Sbjct: 54 SKLEKADILELTVNYLKAQQQQRVANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPG 113
Query: 115 LHFFF 119
L F
Sbjct: 114 LDLKF 118
>sp|Q7KM13|HEY_DROME Hairy/enhancer-of-split related with YRPW motif protein
OS=Drosophila melanogaster GN=Hey PE=2 SV=1
Length = 425
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPH--VLNKFRAGFSECAGEVGRF 112
+KLEKA+IL++TV+HL+++Q + L S + DP ++ GF ECA EV R+
Sbjct: 137 AKLEKAEILQLTVEHLKSLQSKTLD-SLSYDPQRVAMDYHIIGFRECAAEVARY 189
>sp|O54792|HES2_MOUSE Transcription factor HES-2 OS=Mus musculus GN=Hes2 PE=2 SV=2
Length = 157
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 43 HLVQLLCLLFLLL--QPARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNKFRA 100
L QL L+ LL + +R SKLEKADILEMTV+ L Q Q L ++ P LN +
Sbjct: 32 SLSQLKGLVLPLLGAETSRSSKLEKADILEMTVRFL---QEQPATLYSSAAPGPLNSYLE 88
Query: 101 GFSECAGEVGRF 112
G+ C + R
Sbjct: 89 GYRACLARLARV 100
>sp|Q01069|ESMB_DROME Enhancer of split mbeta protein OS=Drosophila melanogaster
GN=HLHmbeta PE=2 SV=2
Length = 195
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 15/79 (18%)
Query: 54 LLQPARH-SKLEKADILEMTVKHLENMQRQ-QLALSAAT-------DPH--VLNKFRAGF 102
L Q H ++LEKADILE+TV+H++ ++ Q QL LS+ T DP + FRAG+
Sbjct: 44 LTQEGEHITRLEKADILELTVEHMKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAGY 103
Query: 103 SECAGEVGR----FPGLHF 117
A EV + PG+
Sbjct: 104 VHAANEVSKTLAAVPGVSV 122
>sp|Q01070|ESMC_DROME Enhancer of split mgamma protein OS=Drosophila melanogaster
GN=HLHmgamma PE=2 SV=1
Length = 205
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVL--NKFRAGFSECAGEVGR----FPG 114
++LEKADILE+TV HL+ M++Q+ A+ D + FR+G+ EV R PG
Sbjct: 54 TRLEKADILELTVTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLSQLPG 113
Query: 115 LHFFF 119
++
Sbjct: 114 MNVSL 118
>sp|P35429|HES2_RAT Transcription factor HES-2 OS=Rattus norvegicus GN=Hes2 PE=2 SV=1
Length = 157
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 18 IGHVIEIQQVFCKMQIICSSKTLKRHLVQLLCLLFLLL--QPARHSKLEKADILEMTVKH 75
+G E+++ + + L QL L+ LL + +R+SKLEKADILEMTV+
Sbjct: 7 VGDAAELRKSLKPLLEKRRRARINESLSQLKGLVLPLLGAETSRYSKLEKADILEMTVRF 66
Query: 76 LENMQRQQLALSAATD-PHVLNKFRAGFSECAGEVGRF 112
L R+Q A +T+ P L+ + G+ C + R
Sbjct: 67 L----REQPASVCSTEAPGSLDSYLEGYRACLARLARV 100
>sp|Q9Y543|HES2_HUMAN Transcription factor HES-2 OS=Homo sapiens GN=HES2 PE=2 SV=1
Length = 173
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Query: 14 LMFHIGHVIEIQQVFCKMQIICSSKTLKRHLVQLLCLLFLLL--QPARHSKLEKADILEM 71
L G E+++ + + + L QL L+ LL + + SKLEKAD+LEM
Sbjct: 3 LPRRAGDAAELRKSLKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEM 62
Query: 72 TVKHLENMQRQQLALSAATDPHVLNKFRAGFSECAGEVGRF 112
TV+ L+ + +A P + +R G+S C + R
Sbjct: 63 TVRFLQELPASSWPTAA---PLPCDSYREGYSACVARLARV 100
>sp|P70120|HES5_MOUSE Transcription factor HES-5 OS=Mus musculus GN=Hes5 PE=2 SV=1
Length = 167
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 58 ARH---SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK-FRAGFSECAGEVGRFP 113
ARH SKLEKADILEM V +L++ + A +AA P L++ + G+S C E +F
Sbjct: 48 ARHQPNSKLEKADILEMAVSYLKHSK----AFAAAAGPKSLHQDYSEGYSWCLQEAVQFL 103
Query: 114 GLH 116
LH
Sbjct: 104 TLH 106
>sp|Q5TA89|HES5_HUMAN Transcription factor HES-5 OS=Homo sapiens GN=HES5 PE=2 SV=1
Length = 166
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
Query: 58 ARH---SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK-FRAGFSECAGEVGRFP 113
ARH SKLEKADILEM V +L++ + A AA P L++ + G+S C E +F
Sbjct: 48 ARHQPNSKLEKADILEMAVSYLKHSK----AFVAAAGPKSLHQDYSEGYSWCLQEAVQFL 103
Query: 114 GLH 116
LH
Sbjct: 104 TLH 106
>sp|Q03062|HES5_RAT Transcription factor HES-5 OS=Rattus norvegicus GN=Hes5 PE=2 SV=1
Length = 166
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 58 ARH---SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK-FRAGFSECAGEVGRFP 113
ARH SKLEKADILEM V +L++ + A +AA P L++ + G+S C E +F
Sbjct: 48 ARHQPNSKLEKADILEMAVSYLKHSK----AFAAAAGPKSLHQDYSEGYSWCLQEAVQFL 103
Query: 114 GLH 116
LH
Sbjct: 104 TLH 106
>sp|P13097|ESM7_DROME Enhancer of split m7 protein OS=Drosophila melanogaster GN=HLHm7
PE=2 SV=1
Length = 186
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNKFRAGFSECAGEVGR 111
+K EKADILE+TV+HL ++ + + A + FRAG+ A EV R
Sbjct: 50 AKFEKADILEVTVQHLRKLKESKKHVPANPE----QSFRAGYIRAANEVSR 96
>sp|Q00P32|HES2_XENLA Transcription factor HES-2 OS=Xenopus laevis GN=hes2 PE=1 SV=2
Length = 191
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 44 LVQLLCLLFLLL--QPARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNKFRAG 101
L QL L+ L+ +R+SKLEKADILEMTV+ L ++ Q A ++++ G
Sbjct: 48 LNQLKTLILPLIGKDNSRYSKLEKADILEMTVRFLRDIPPVQAQNQA-------DRYKEG 100
Query: 102 FSEC 105
+ C
Sbjct: 101 YRAC 104
>sp|Q9WV93|HEY1_MOUSE Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Mus
musculus GN=Hey1 PE=1 SV=1
Length = 299
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 21/108 (19%)
Query: 24 IQQVFCKMQIICSSKTLKRH-----------------LVQLLCLLFLLLQPARHSKLEKA 66
+ C M SS+ L R L +L L+ + +KLEKA
Sbjct: 32 LSSALCSMSPTTSSQVLARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGSAKLEKA 91
Query: 67 DILEMTVKHLENMQRQQLALSAATDPHVLN-KFRA-GFSECAGEVGRF 112
+IL+MTV HL+ + D H L +R+ GF EC EV R+
Sbjct: 92 EILQMTVDHLKML--HTAGGKGYFDAHALAMDYRSLGFRECLAEVARY 137
>sp|Q9QUS4|HEY2_MOUSE Hairy/enhancer-of-split related with YRPW motif protein 2 OS=Mus
musculus GN=Hey2 PE=1 SV=1
Length = 339
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 40 LKRHLVQLLCLLFLLLQPARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLNK-- 97
+ L +L L+ + +KLEKA+IL+MTV HL+ + Q D H L
Sbjct: 64 INNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKML--QATGGKGYFDAHALATDF 121
Query: 98 FRAGFSECAGEVGRF 112
GF EC EV R+
Sbjct: 122 MSIGFRECLTEVARY 136
>sp|Q9UBP5|HEY2_HUMAN Hairy/enhancer-of-split related with YRPW motif protein 2 OS=Homo
sapiens GN=HEY2 PE=1 SV=1
Length = 337
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 40 LKRHLVQLLCLLFLLLQPARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVL--NK 97
+ L +L L+ + +KLEKA+IL+MTV HL+ + Q D H L +
Sbjct: 64 INNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKML--QATGGKGYFDAHALAMDF 121
Query: 98 FRAGFSECAGEVGRF 112
GF EC EV R+
Sbjct: 122 MSIGFRECLTEVARY 136
>sp|Q8AXV5|HEYL_DANRE Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Danio rerio GN=heyl PE=2 SV=2
Length = 310
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN-KFRA-GFSECAGEVGRF 112
SKLEKA+IL+MTV HL+ + + D L +R GF EC GEV R+
Sbjct: 80 SKLEKAEILQMTVDHLKLL--HAMGGKGYFDARALAVDYRTLGFRECVGEVVRY 131
>sp|Q9I9L0|HEY2_DANRE Hairy/enhancer-of-split related with YRPW motif protein 2 OS=Danio
rerio GN=hey2 PE=2 SV=2
Length = 324
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 40 LKRHLVQLLCLLFLLLQPARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVL--NK 97
+ L +L L+ + +KLEKA+IL+MTV HL+ + Q D H L +
Sbjct: 64 INNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKML--QATGGKGYFDAHSLAMDF 121
Query: 98 FRAGFSECAGEVGRF 112
GF EC EV R+
Sbjct: 122 LSIGFRECLTEVARY 136
>sp|Q9I8A3|HEY1_XENLA Hairy/enhancer-of-split related with YRPW motif protein 1
OS=Xenopus laevis GN=hey1 PE=1 SV=1
Length = 294
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN-KFRA-GFSECAGEVGRF 112
+KLEKA+IL+MTV HL+ + D H L +R+ GF EC EV R+
Sbjct: 81 AKLEKAEILQMTVDHLKML--HTAGGKGYFDAHALAMDYRSLGFRECLAEVARY 132
>sp|Q66KK8|HEY1_XENTR Hairy/enhancer-of-split related with YRPW motif protein 1
OS=Xenopus tropicalis GN=hey1 PE=2 SV=1
Length = 300
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN-KFRA-GFSECAGEVGRF 112
+KLEKA+IL+MTV HL+ + D H L +R+ GF EC EV R+
Sbjct: 85 AKLEKAEILQMTVDHLKML--HTAGGKGYFDAHALAMDYRSLGFRECLAEVARY 136
>sp|Q2KIN4|HEY1_BOVIN Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Bos
taurus GN=HEY1 PE=2 SV=1
Length = 304
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN-KFRA-GFSECAGEVGRF 112
+KLEKA+IL+MTV HL+ + D H L +R+ GF EC EV R+
Sbjct: 86 AKLEKAEILQMTVDHLKML--HTAGGKGYFDAHALAMDYRSLGFRECLAEVARY 137
>sp|Q9Y5J3|HEY1_HUMAN Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Homo
sapiens GN=HEY1 PE=1 SV=1
Length = 304
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN-KFRA-GFSECAGEVGRF 112
+KLEKA+IL+MTV HL+ + D H L +R+ GF EC EV R+
Sbjct: 86 AKLEKAEILQMTVDHLKML--HTAGGKGYFDAHALAMDYRSLGFRECLAEVARY 137
>sp|Q9TSZ2|HEY1_CANFA Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Canis
familiaris GN=HEY1 PE=2 SV=1
Length = 304
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN-KFRA-GFSECAGEVGRF 112
+KLEKA+IL+MTV HL+ + D H L +R+ GF EC EV R+
Sbjct: 86 AKLEKAEILQMTVDHLKML--HTAGGKGYFDAHALAMDYRSLGFRECLAEVARY 137
>sp|Q01068|ESM3_DROME Enhancer of split m3 protein OS=Drosophila melanogaster GN=HLHm3
PE=1 SV=1
Length = 224
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 14/69 (20%)
Query: 54 LLQPARH-SKLEKADILEMTVKHLENM-QRQQLAL-----------SAATDPHVLNKFRA 100
L Q H ++LEKADILE+TV H+ + QR L+L ++ + HV FR+
Sbjct: 42 LQQEGEHVTRLEKADILELTVDHMRKLKQRGGLSLQGVVAGVGSPPTSTSTAHV-ESFRS 100
Query: 101 GFSECAGEV 109
G+ A ++
Sbjct: 101 GYVHAADQI 109
>sp|Q04667|HES3_RAT Transcription factor HES-3 OS=Rattus norvegicus GN=Hes3 PE=2 SV=1
Length = 175
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 59 RHSKLEKADILEMTVKHLENMQ 80
R KLEKADILE++VK++ ++Q
Sbjct: 29 RKRKLEKADILELSVKYVRSLQ 50
>sp|Q9DBX7|HEYL_MOUSE Hairy/enhancer-of-split related with YRPW motif-like protein OS=Mus
musculus GN=Heyl PE=1 SV=2
Length = 326
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAAT---DPHVLN-KFRA-GFSECAGEVGRF 112
SKLEKA++L+MTV HL + L S T D L FR+ GF EC EV R+
Sbjct: 80 SKLEKAEVLQMTVDHL-----KMLHASGGTGFFDARALAVDFRSIGFRECLTEVIRY 131
>sp|Q5TGS1|HES3_HUMAN Transcription factor HES-3 OS=Homo sapiens GN=HES3 PE=2 SV=1
Length = 186
Score = 33.1 bits (74), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 59 RHSKLEKADILEMTVKHLENMQ 80
R KLEKADILE++VK++ ++Q
Sbjct: 29 RKRKLEKADILELSVKYMRSLQ 50
>sp|Q8AXV6|HEY1_DANRE Hairy/enhancer-of-split related with YRPW motif protein 1 OS=Danio
rerio GN=hey1 PE=2 SV=1
Length = 317
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 40 LKRHLVQLLCLLFLLLQPARHSKLEKADILEMTVKHLENMQRQQLALSAATDPHVLN-KF 98
+ L +L L+ + +KLEKA+IL+MTV HL+ + D H L +
Sbjct: 64 INNSLSELRRLVPSAFEKQGSAKLEKAEILQMTVDHLKML--HAAGGKGYFDAHALAMDY 121
Query: 99 RA-GFSECAGEVGRF 112
R GF EC E R+
Sbjct: 122 RGLGFRECLAETARY 136
>sp|Q61657|HES3_MOUSE Transcription factor HES-3 OS=Mus musculus GN=Hes3 PE=2 SV=2
Length = 175
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 59 RHSKLEKADILEMTVKHLENMQ 80
R KLEKADILE++VK++ ++Q
Sbjct: 29 RKRKLEKADILELSVKYMRSLQ 50
>sp|Q9CIV8|DHAK_LACLA PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding
subunit DhaK OS=Lactococcus lactis subsp. lactis (strain
IL1403) GN=dhaK PE=1 SV=2
Length = 332
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 22 IEIQQVFCKMQIICSSK--TLKRHLVQLLCLLFLLLQPARHSKLEKADILEMTVKHLENM 79
I+++Q+ I + T R V L+ +L A H + +I ++ K ++N+
Sbjct: 127 IKVEQIIVDDDIAVENSLYTQGRRGVAGTVLVHKILGAAAHQEASLDEIKDLADKVVKNI 186
Query: 80 QRQQLALSAATDPHVLNKFRAGFSECAGEVGRFPGLH 116
+ LALSAAT P V + GF E+ G+H
Sbjct: 187 KTIGLALSAATVPEV---GKPGFVLDDNEIEYGVGIH 220
>sp|A6NFD8|HELT_HUMAN Hairy and enhancer of split-related protein HELT OS=Homo sapiens
GN=HELT PE=2 SV=1
Length = 327
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 13/61 (21%)
Query: 52 FLLLQPARHSKLEKADILEMTVKHLENMQ-------RQQLALSAATDPHVLNKFRAGFSE 104
FLLLQ KLEKA+ILEMTV++L + R++ L A N F G+ E
Sbjct: 125 FLLLQ--SSGKLEKAEILEMTVQYLRALHSADFPRGREKAELLA----EFANYFHYGYHE 178
Query: 105 C 105
C
Sbjct: 179 C 179
>sp|Q9NQ87|HEYL_HUMAN Hairy/enhancer-of-split related with YRPW motif-like protein
OS=Homo sapiens GN=HEYL PE=2 SV=2
Length = 328
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAAT---DPHVLN-KFRA-GFSECAGEVGRF 112
SKLEKA++L+MTV HL + L + T D L FR+ GF EC EV R+
Sbjct: 80 SKLEKAEVLQMTVDHL-----KMLHATGGTGFFDARALAVDFRSIGFRECLTEVIRY 131
>sp|Q2NL18|HEYL_BOVIN Hairy/enhancer-of-split related with YRPW motif-like protein OS=Bos
taurus GN=HEYL PE=2 SV=3
Length = 328
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 10/57 (17%)
Query: 61 SKLEKADILEMTVKHLENMQRQQLALSAAT---DPHVLN-KFRA-GFSECAGEVGRF 112
SKLEKA++L+MTV HL + L + T D L FR+ GF EC EV R+
Sbjct: 80 SKLEKAEVLQMTVDHL-----KMLHATGGTGFFDARALAVDFRSIGFRECLTEVIRY 131
>sp|Q96HZ4|HES6_HUMAN Transcription cofactor HES-6 OS=Homo sapiens GN=HES6 PE=1 SV=1
Length = 224
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 13/79 (16%)
Query: 38 KTLKRHLVQLLCLLFLLLQPAR-HSKLEKADILEMTVKHLENM------QRQQLALSAAT 90
K + + + L L LLL A +KLE A++LE+TV+ ++ + +R+QL A+
Sbjct: 35 KKRRARINESLQELRLLLAGAEVQAKLENAEVLELTVRRVQGVLRGRAREREQLQAEAS- 93
Query: 91 DPHVLNKFRAGFSECAGEV 109
+F AG+ +C EV
Sbjct: 94 -----ERFAAGYIQCMHEV 107
>sp|Q99PV5|BHE41_MOUSE Class E basic helix-loop-helix protein 41 OS=Mus musculus
GN=Bhlhe41 PE=2 SV=1
Length = 410
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 44 LVQLLCLLFLLLQPARHSKLEKADILEMTVKHLENM-----QRQQLALSAATDPHV---- 94
+ QL LL L+ LEKA +LE+T+KHL+ + Q+ Q ++
Sbjct: 64 IAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSLKSP 123
Query: 95 ----LNKFRAGFSECAGEVGRF 112
L+ F +GF CA EV ++
Sbjct: 124 VQADLDAFHSGFQTCAKEVLQY 145
>sp|O35779|BHE41_RAT Class E basic helix-loop-helix protein 41 OS=Rattus norvegicus
GN=Bhlhb3 PE=2 SV=2
Length = 410
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 13/82 (15%)
Query: 44 LVQLLCLLFLLLQPARHSKLEKADILEMTVKHLENM-----QRQQLALSAATDPHV---- 94
+ QL LL L+ LEKA +LE+T+KHL+ + Q+ Q ++
Sbjct: 64 IAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSLKSP 123
Query: 95 ----LNKFRAGFSECAGEVGRF 112
L+ F +GF CA EV ++
Sbjct: 124 VQADLDAFHSGFQTCAKEVLQY 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.141 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,866,677
Number of Sequences: 539616
Number of extensions: 1421253
Number of successful extensions: 4001
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 3943
Number of HSP's gapped (non-prelim): 72
length of query: 127
length of database: 191,569,459
effective HSP length: 93
effective length of query: 34
effective length of database: 141,385,171
effective search space: 4807095814
effective search space used: 4807095814
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)