Query psy9724
Match_columns 140
No_of_seqs 110 out of 1048
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 17:59:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9724.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9724hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1uqt_A Alpha, alpha-trehalose- 100.0 1.5E-31 5.1E-36 229.0 13.6 128 1-130 255-392 (482)
2 3t5t_A Putative glycosyltransf 100.0 5.5E-31 1.9E-35 227.2 13.8 125 1-131 281-411 (496)
3 3oy2_A Glycosyltransferase B73 99.6 1.1E-15 3.7E-20 123.9 10.7 121 1-130 184-309 (413)
4 2bfw_A GLGA glycogen synthase; 99.5 1.3E-14 4.5E-19 106.9 8.1 108 2-131 37-152 (200)
5 3qhp_A Type 1 capsular polysac 99.5 2.1E-14 7.2E-19 103.1 8.4 104 1-130 2-112 (166)
6 3c48_A Predicted glycosyltrans 99.5 7.5E-14 2.6E-18 113.6 12.0 115 1-131 243-362 (438)
7 3fro_A GLGA glycogen synthase; 99.5 3.4E-14 1.2E-18 114.5 9.8 108 2-131 252-367 (439)
8 2x6q_A Trehalose-synthase TRET 99.5 9.1E-14 3.1E-18 112.9 11.6 113 2-130 232-351 (416)
9 3vue_A GBSS-I, granule-bound s 99.5 2.2E-14 7.4E-19 123.7 8.0 106 2-131 328-438 (536)
10 1rzu_A Glycogen synthase 1; gl 99.5 1.4E-13 4.9E-18 113.9 10.8 106 2-131 292-402 (485)
11 2qzs_A Glycogen synthase; glyc 99.5 1.5E-13 5E-18 113.9 10.5 105 2-130 293-402 (485)
12 2r60_A Glycosyl transferase, g 99.5 6.8E-14 2.3E-18 116.7 8.5 118 2-131 263-395 (499)
13 3okp_A GDP-mannose-dependent a 99.5 2.7E-13 9.2E-18 108.0 10.1 106 2-131 199-316 (394)
14 3s28_A Sucrose synthase 1; gly 99.5 1.2E-13 4E-18 125.1 8.3 118 1-131 572-701 (816)
15 2iuy_A Avigt4, glycosyltransfe 99.4 5E-13 1.7E-17 105.8 9.2 101 2-131 163-278 (342)
16 2f9f_A First mannosyl transfer 99.4 1.2E-12 4.1E-17 96.0 8.2 107 1-131 23-134 (177)
17 2vsy_A XCC0866; transferase, g 99.4 9.3E-13 3.2E-17 111.2 8.5 102 3-127 378-492 (568)
18 2gek_A Phosphatidylinositol ma 99.4 1.1E-12 3.9E-17 105.0 8.2 104 2-130 209-319 (406)
19 2x0d_A WSAF; GT4 family, trans 99.3 6.7E-12 2.3E-16 104.5 9.0 102 2-130 242-349 (413)
20 2iw1_A Lipopolysaccharide core 99.3 3.1E-12 1E-16 101.4 5.6 106 1-131 196-307 (374)
21 2jjm_A Glycosyl transferase, g 99.3 3.7E-12 1.3E-16 102.7 5.8 105 2-131 212-321 (394)
22 2hy7_A Glucuronosyltransferase 99.1 2.2E-10 7.5E-15 94.5 7.2 88 2-126 223-323 (406)
23 3nb0_A Glycogen [starch] synth 99.0 3.6E-10 1.2E-14 101.0 6.4 50 79-130 494-554 (725)
24 1vgv_A UDP-N-acetylglucosamine 99.0 1.5E-09 5.3E-14 86.6 8.9 103 2-130 207-314 (384)
25 1v4v_A UDP-N-acetylglucosamine 98.8 5.4E-09 1.8E-13 83.5 7.4 103 2-130 200-306 (376)
26 3beo_A UDP-N-acetylglucosamine 98.8 8.3E-09 2.8E-13 81.9 7.5 102 3-130 208-314 (375)
27 2xci_A KDO-transferase, 3-deox 98.6 6.5E-08 2.2E-12 79.1 7.9 109 3-130 198-315 (374)
28 1f0k_A MURG, UDP-N-acetylgluco 98.5 2E-07 6.9E-12 73.7 6.5 99 3-131 186-287 (364)
29 3dzc_A UDP-N-acetylglucosamine 98.2 6.8E-06 2.3E-10 67.7 9.7 101 3-130 233-339 (396)
30 3ot5_A UDP-N-acetylglucosamine 97.7 6.5E-05 2.2E-09 62.0 6.2 103 3-130 227-333 (403)
31 3q3e_A HMW1C-like glycosyltran 97.4 0.00086 2.9E-08 59.3 9.9 105 3-130 443-553 (631)
32 2c4m_A Glycogen phosphorylase; 97.1 0.018 6E-07 52.3 15.0 121 2-127 517-649 (796)
33 3rhz_A GTF3, nucleotide sugar 97.1 0.00078 2.7E-08 54.8 5.8 84 2-131 179-277 (339)
34 1l5w_A Maltodextrin phosphoryl 96.9 0.035 1.2E-06 50.4 15.2 121 2-127 527-659 (796)
35 2gj4_A Glycogen phosphorylase, 96.7 0.054 1.9E-06 49.3 15.4 121 2-127 551-683 (824)
36 4hwg_A UDP-N-acetylglucosamine 95.8 0.028 9.6E-07 46.1 7.7 99 2-127 205-310 (385)
37 2o6l_A UDP-glucuronosyltransfe 93.7 0.053 1.8E-06 38.3 3.6 42 81-128 71-116 (170)
38 3otg_A CALG1; calicheamicin, T 93.4 0.25 8.6E-06 39.0 7.3 41 79-128 294-338 (412)
39 2p6p_A Glycosyl transferase; X 91.8 0.32 1.1E-05 38.3 6.0 87 2-128 212-309 (384)
40 4gyw_A UDP-N-acetylglucosamine 91.0 0.57 2E-05 41.5 7.3 94 14-125 534-629 (723)
41 2iyf_A OLED, oleandomycin glyc 90.9 0.1 3.4E-06 41.9 2.2 41 79-128 285-329 (430)
42 3tsa_A SPNG, NDP-rhamnosyltran 89.2 0.073 2.5E-06 42.1 0.0 92 2-128 220-316 (391)
43 3s2u_A UDP-N-acetylglucosamine 86.1 1.5 5.1E-05 35.0 6.0 32 89-125 244-279 (365)
44 1psw_A ADP-heptose LPS heptosy 81.6 2.4 8.2E-05 32.8 5.4 45 78-125 242-287 (348)
45 3idf_A USP-like protein; unive 79.4 11 0.00037 24.8 9.5 100 1-107 2-111 (138)
46 3s3t_A Nucleotide-binding prot 77.8 13 0.00043 24.6 7.9 99 1-107 6-118 (146)
47 2yjn_A ERYCIII, glycosyltransf 77.7 1.7 5.7E-05 35.1 3.4 42 81-128 322-365 (441)
48 4fzr_A SSFS6; structural genom 77.0 0.42 1.4E-05 37.9 -0.4 39 82-128 288-330 (398)
49 3fdx_A Putative filament prote 74.8 15 0.00052 24.1 12.1 102 1-110 2-119 (143)
50 3hbm_A UDP-sugar hydrolase; PS 72.3 2.4 8.3E-05 33.3 3.0 31 89-125 217-251 (282)
51 4egs_A Ribose 5-phosphate isom 72.3 5.5 0.00019 29.2 4.8 47 21-67 122-176 (180)
52 3oti_A CALG3; calicheamicin, T 70.5 2.6 9E-05 33.2 2.8 39 79-126 285-327 (398)
53 3rsc_A CALG2; TDP, enediyne, s 63.2 12 0.0004 29.4 5.3 41 79-126 299-341 (415)
54 3hgm_A Universal stress protei 62.6 28 0.00096 22.8 6.5 25 82-107 94-120 (147)
55 2cwd_A Low molecular weight ph 55.9 14 0.00047 26.3 4.1 46 22-67 94-146 (161)
56 4etn_A LMPTP, low molecular we 55.3 12 0.00043 27.5 3.9 47 21-67 120-175 (184)
57 3ia7_A CALG4; glycosysltransfe 53.8 28 0.00094 26.8 5.9 39 82-126 285-325 (402)
58 2wja_A Putative acid phosphata 53.3 18 0.00061 26.2 4.4 48 22-69 110-164 (168)
59 3l4e_A Uncharacterized peptida 51.9 7.6 0.00026 29.0 2.2 66 55-128 44-123 (206)
60 2wmy_A WZB, putative acid phos 50.6 14 0.0005 25.9 3.5 46 22-67 92-144 (150)
61 3cis_A Uncharacterized protein 50.6 77 0.0026 23.8 9.0 100 1-108 172-278 (309)
62 3u02_A Putative transcription- 50.3 87 0.003 24.3 9.2 97 1-99 1-114 (252)
63 2dum_A Hypothetical protein PH 50.0 56 0.0019 22.0 8.6 98 1-107 6-127 (170)
64 2fek_A Low molecular weight pr 47.8 17 0.00057 26.3 3.5 46 22-67 106-158 (167)
65 3tov_A Glycosyl transferase fa 47.4 58 0.002 25.5 6.9 44 79-125 243-287 (349)
66 1mjh_A Protein (ATP-binding do 44.8 67 0.0023 21.4 8.9 97 1-107 6-130 (162)
67 1o7j_A L-asparaginase; atomic 44.0 39 0.0013 27.0 5.4 69 23-97 36-107 (327)
68 3nze_A Putative transcriptiona 43.4 18 0.00061 27.9 3.2 70 34-104 80-157 (267)
69 1p8a_A Protein tyrosine phosph 43.1 17 0.00058 25.3 2.8 45 22-67 90-139 (146)
70 3dlo_A Universal stress protei 42.9 75 0.0026 21.4 8.9 99 1-107 25-127 (155)
71 1tq8_A Hypothetical protein RV 41.4 57 0.002 22.3 5.4 25 83-108 104-130 (163)
72 2wlt_A L-asparaginase; hydrola 40.1 40 0.0014 27.0 4.9 69 23-97 36-107 (332)
73 1wsa_A Asparaginase, asparagin 39.7 34 0.0012 27.4 4.5 69 23-97 34-105 (330)
74 3tnj_A Universal stress protei 39.7 77 0.0026 20.7 8.4 99 1-107 7-119 (150)
75 3fg9_A Protein of universal st 39.7 80 0.0028 20.9 6.6 27 85-111 104-134 (156)
76 1nu0_A Hypothetical protein YQ 37.6 23 0.0008 24.8 2.8 61 18-88 40-100 (138)
77 1ygp_A Yeast glycogen phosphor 37.1 2.1E+02 0.0074 26.2 9.6 115 3-128 602-733 (879)
78 3jvi_A Protein tyrosine phosph 36.2 36 0.0012 24.1 3.7 45 22-66 94-149 (161)
79 4amg_A Snogd; transferase, pol 34.6 33 0.0011 26.5 3.5 40 81-128 291-334 (400)
80 2jqt_A H-NS/STPA-binding prote 33.5 20 0.00069 22.8 1.7 27 58-99 17-44 (71)
81 1u2p_A Ptpase, low molecular w 31.8 56 0.0019 23.0 4.1 44 22-66 93-148 (163)
82 3bij_A Uncharacterized protein 31.1 1.8E+02 0.006 22.2 7.5 56 3-67 7-71 (285)
83 1t5i_A C_terminal domain of A 30.2 1.3E+02 0.0046 20.6 10.7 77 17-113 16-98 (172)
84 3h4t_A Glycosyltransferase GTF 30.2 66 0.0023 25.3 4.7 43 81-129 271-315 (404)
85 3kh6_A Poly [ADP-ribose] polym 29.4 40 0.0014 25.1 3.1 50 7-62 141-191 (199)
86 3nxk_A Cytoplasmic L-asparagin 29.4 39 0.0013 27.2 3.2 68 23-97 40-110 (334)
87 2hjv_A ATP-dependent RNA helic 29.0 1.4E+02 0.0046 20.2 9.4 77 17-113 20-102 (163)
88 3efb_A Probable SOR-operon reg 28.2 94 0.0032 23.6 5.1 68 35-104 86-162 (266)
89 3o7i_A OHCU decarboxylase; lya 28.2 20 0.00069 26.7 1.2 69 24-96 84-157 (189)
90 1jw9_B Molybdopterin biosynthe 28.1 39 0.0013 25.5 2.8 54 78-131 102-159 (249)
91 3cgx_A Putative nucleotide-dip 28.0 1.8E+02 0.0061 21.7 6.7 48 76-123 103-158 (242)
92 1agx_A Glutaminase-asparaginas 27.4 33 0.0011 27.4 2.4 70 23-97 33-104 (331)
93 1iv0_A Hypothetical protein; r 27.3 48 0.0016 21.8 2.9 62 15-87 35-96 (98)
94 1jw2_A Hemolysin expression mo 26.5 27 0.00092 22.3 1.4 28 57-99 21-48 (72)
95 1wls_A L-asparaginase; structu 26.4 1.2E+02 0.0042 24.0 5.7 65 23-96 27-94 (328)
96 3hhl_A RPA0582; alpha-beta-bar 25.6 1.7E+02 0.0059 20.3 8.1 74 21-97 11-107 (143)
97 2rb4_A ATP-dependent RNA helic 25.2 1.7E+02 0.0056 20.0 11.0 80 14-113 16-101 (175)
98 1spv_A Putative polyprotein/ph 25.2 58 0.002 23.6 3.2 46 8-60 126-171 (184)
99 1iir_A Glycosyltransferase GTF 25.0 40 0.0014 26.6 2.5 40 81-128 288-331 (415)
100 4pga_A Glutaminase-asparaginas 24.6 77 0.0026 25.4 4.2 68 23-97 41-112 (337)
101 3eaq_A Heat resistant RNA depe 24.3 2E+02 0.0067 20.5 9.3 78 16-113 15-98 (212)
102 4abl_A Poly [ADP-ribose] polym 23.5 66 0.0022 23.5 3.3 48 9-62 132-180 (183)
103 3dmq_A RNA polymerase-associat 23.1 2.5E+02 0.0087 25.4 7.7 81 16-115 487-575 (968)
104 1zq1_A Glutamyl-tRNA(Gln) amid 22.5 92 0.0031 26.0 4.3 66 23-96 120-189 (438)
105 1fy2_A Aspartyl dipeptidase; s 22.4 84 0.0029 23.3 3.8 92 16-127 17-122 (229)
106 2z08_A Universal stress protei 21.9 1.6E+02 0.0056 18.7 6.2 26 81-107 82-109 (137)
107 3n8i_A Low molecular weight ph 21.6 1.1E+02 0.0036 21.6 4.0 45 23-67 96-152 (157)
108 1jf8_A Arsenate reductase; ptp 21.5 1.9E+02 0.0065 19.4 5.3 40 28-67 87-128 (131)
109 1yir_A Naprtase 2, nicotinate 21.5 3E+02 0.01 22.5 7.2 45 79-124 315-375 (408)
110 1nns_A L-asparaginase II; amid 21.5 1.3E+02 0.0045 23.8 4.9 67 23-97 32-101 (326)
111 3b1j_C CP12; alpha/beta fold, 21.4 39 0.0013 17.2 1.2 15 21-35 5-19 (26)
112 2amj_A Modulator of drug activ 21.3 2.3E+02 0.0079 20.3 7.7 60 38-104 15-77 (204)
113 4emt_A Transmembrane protein 1 20.9 71 0.0024 23.9 3.0 28 21-48 140-167 (188)
114 1q77_A Hypothetical protein AQ 20.8 1.7E+02 0.0059 18.6 9.1 98 1-107 5-119 (138)
115 3acd_A Hypoxanthine-guanine ph 20.4 93 0.0032 22.5 3.5 37 53-89 16-52 (181)
116 4ef4_A Transmembrane protein 1 20.1 2.7E+02 0.0092 21.8 6.2 27 21-47 179-205 (265)
No 1
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.97 E-value=1.5e-31 Score=229.01 Aligned_cols=128 Identities=38% Similarity=0.654 Sum_probs=122.3
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
+++|++|||+|+.||++.+|+||++|++++|+|+++++|+|+|.|++++.++|+++++++++++++||.+||+.+|.||+
T Consensus 255 ~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~ 334 (482)
T 1uqt_A 255 VQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLY 334 (482)
T ss_dssp CEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEE
T ss_pred CEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEE
Confidence 57999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCc-----eeeecCCCCcc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGN-----FRIKSAPSGNR 130 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~-----~~v~~~~gg~~ 130 (140)
|+.+.++++++.++|++|||+++||++|||||| || |+ |+|.|+.||..
T Consensus 335 ~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~--g~~~~~gpvV~S~~~G~~ 392 (482)
T 1uqt_A 335 YLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAA--QDPANPGVLVLSQFAGAA 392 (482)
T ss_dssp EECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHH--SCTTSCCEEEEETTBGGG
T ss_pred EeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHh--CCCCCCCCEEEECCCCCH
Confidence 999999999999999999999999999999998 89 75 89999987754
No 2
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.97 E-value=5.5e-31 Score=227.17 Aligned_cols=125 Identities=19% Similarity=0.184 Sum_probs=115.2
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
+++|++|||+|+.||++.+|+|| +||++||+|+ +++|+|+|.|++++.++|+++++++++++++||.+||+. ||+
T Consensus 281 ~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~-~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~---~V~ 355 (496)
T 3t5t_A 281 HRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLE-KTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSD---TVR 355 (496)
T ss_dssp SEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCT-TEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTT---SEE
T ss_pred ceEEEEcccCccccCHHHHHHHH-HHHHhCcccc-eEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCc---CEE
Confidence 58999999999999999999999 9999999999 999999999999999999999999999999999999986 888
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eec-CCceeeecCCCCccc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSR-SGNFRIKSAPSGNRT 131 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~-~G~~~v~~~~gg~~~ 131 (140)
|. +.++.+|+.+||++|||+++||++|||||| ||. .+.|+|.|..+|...
T Consensus 356 f~-g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~ 411 (496)
T 3t5t_A 356 ID-NDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAE 411 (496)
T ss_dssp EE-ECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHH
T ss_pred Ee-CCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHH
Confidence 75 678999999999999999999999999998 782 237888888888643
No 3
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=99.64 E-value=1.1e-15 Score=123.91 Aligned_cols=121 Identities=15% Similarity=0.086 Sum_probs=94.8
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
+.+|++++|+++.||++..++|++++.+++|+++ |+.+|........ ++.+.+++++.+.|-.-.-.-+..++
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~----l~ivG~g~~~~~~---~l~~~~~~~~~~~~l~~~v~~l~~vv 256 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAK----VRFLCNSHHESKF---DLHSIALRELVASGVDNVFTHLNKIM 256 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCC----EEEEEECCTTCSC---CHHHHHHHHHHHHTCSCHHHHHTTEE
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcE----EEEEeCCcccchh---hHHHHHHHHHHHcCccccccccccee
Confidence 3689999999999999999999999999999874 7777765432211 35566777777654210000001156
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCcc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNR 130 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~ 130 (140)
++.+.++.+++..+|+.||++++||..|||+++ || |+|||+|++||.+
T Consensus 257 ~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~--G~PvI~s~~~g~~ 309 (413)
T 3oy2_A 257 INRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVL--GKPLIISAVGGAD 309 (413)
T ss_dssp EECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTT--TCCEEEECCHHHH
T ss_pred eccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHc--CCCEEEcCCCChH
Confidence 779999999999999999999999999999998 88 9999999999964
No 4
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.54 E-value=1.3e-14 Score=106.91 Aligned_cols=108 Identities=20% Similarity=0.264 Sum_probs=89.8
Q ss_pred EEEEEecCcc-ccCCHHHHHHHHHHHH--HhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy9724 2 SLVLSVDRLD-YTKGLVHRLKAFETLL--EKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 78 (140)
Q Consensus 2 ~iil~VdRld-~~KGi~~kl~A~~~~L--~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~p 78 (140)
++|++++|++ +.||++..++|++.+. +++|++ .|+.+|... + ++.+++.+++.+.+ .
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~----~l~i~G~~~----~---~~~~~l~~~~~~~~---------~ 96 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM----RFIIIGKGD----P---ELEGWARSLEEKHG---------N 96 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE----EEEEECCBC----H---HHHHHHHHHHHHCT---------T
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCe----EEEEECCCC----h---HHHHHHHHHHHhcC---------C
Confidence 5899999999 9999999999999998 777764 577776531 1 24566677777643 4
Q ss_pred EEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 79 IRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
|+++.+.++.+++..+|+.||++++||..|||+++ || |+|+|+|..||.+.
T Consensus 97 v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~--G~PvI~~~~~~~~e 152 (200)
T 2bfw_A 97 VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL--GAIPIASAVGGLRD 152 (200)
T ss_dssp EEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHT--TCEEEEESCHHHHH
T ss_pred EEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHC--CCCEEEeCCCChHH
Confidence 66658999999999999999999999999999997 88 99999999998753
No 5
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.54 E-value=2.1e-14 Score=103.14 Aligned_cols=104 Identities=15% Similarity=0.110 Sum_probs=82.8
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
+.+|++++|+++.||++..++|++++ +++| ++.|+.+|... ..+++.+++.+.+. .+
T Consensus 2 ~~~i~~~G~~~~~Kg~~~li~a~~~l-~~~~----~~~l~i~G~g~---------~~~~~~~~~~~~~~--------~v- 58 (166)
T 3qhp_A 2 PFKIAMVGRYSNEKNQSVLIKAVALS-KYKQ----DIVLLLKGKGP---------DEKKIKLLAQKLGV--------KA- 58 (166)
T ss_dssp CEEEEEESCCSTTTTHHHHHHHHHTC-TTGG----GEEEEEECCST---------THHHHHHHHHHHTC--------EE-
T ss_pred ceEEEEEeccchhcCHHHHHHHHHHh-ccCC----CeEEEEEeCCc---------cHHHHHHHHHHcCC--------eE-
Confidence 45799999999999999999999986 4445 45688777531 13455666666432 24
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCc-eeee-cCCCCcc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGN-FRIK-SAPSGNR 130 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~-~~v~-~~~gg~~ 130 (140)
.+ +.++.+++..+|+.||+++.||..|||+++ || |+ |||+ +..||.+
T Consensus 59 ~~-g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~--G~vPvi~~~~~~~~~ 112 (166)
T 3qhp_A 59 EF-GFVNSNELLEILKTCTLYVHAANVESEAIACLEAISV--GIVPVIANSPLSATR 112 (166)
T ss_dssp EC-CCCCHHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHT--TCCEEEECCTTCGGG
T ss_pred EE-eecCHHHHHHHHHhCCEEEECCcccCccHHHHHHHhc--CCCcEEeeCCCCchh
Confidence 44 899999999999999999999999999997 88 98 9999 5677765
No 6
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.53 E-value=7.5e-14 Score=113.63 Aligned_cols=115 Identities=19% Similarity=0.257 Sum_probs=91.0
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
+.+|++++|+++.||++..++|++.+.+++|+. ++.|+.+|.+.... .+.+++++++.+.+ ..+-+
T Consensus 243 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~--~~~l~i~G~~~~~g-----~~~~~l~~~~~~~~-------l~~~v 308 (438)
T 3c48_A 243 TKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDR--NLRVIICGGPSGPN-----ATPDTYRHMAEELG-------VEKRI 308 (438)
T ss_dssp SEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTC--SEEEEEECCBC-----------CHHHHHHHHTT-------CTTTE
T ss_pred CcEEEEEeeecccCCHHHHHHHHHHHHhhCCCc--ceEEEEEeCCCCCC-----cHHHHHHHHHHHcC-------CCCcE
Confidence 368999999999999999999999999999853 46788888643211 23456667777643 22323
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
.+.+.++.+++..+|+.||+++.||..|||+++ || |.|||+|..||.+.
T Consensus 309 ~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~--G~PvI~~~~~~~~e 362 (438)
T 3c48_A 309 RFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQAS--GTPVIAARVGGLPI 362 (438)
T ss_dssp EEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHT--TCCEEEESCTTHHH
T ss_pred EEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHc--CCCEEecCCCChhH
Confidence 457899999999999999999999999999997 88 99999999999763
No 7
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.53 E-value=3.4e-14 Score=114.50 Aligned_cols=108 Identities=21% Similarity=0.278 Sum_probs=91.4
Q ss_pred EEEEEecCcc-ccCCHHHHHHHHHHHHHhC--CCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy9724 2 SLVLSVDRLD-YTKGLVHRLKAFETLLEKH--PEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 78 (140)
Q Consensus 2 ~iil~VdRld-~~KGi~~kl~A~~~~L~~~--P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~p 78 (140)
.+|++++|++ +.||++..++|++++.+++ |+ +.|+.+|... . .+.+++++++.+.+ .
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~----~~l~i~G~g~----~---~~~~~l~~~~~~~~---------~ 311 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQE----MRFIIIGKGD----P---ELEGWARSLEEKHG---------N 311 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGG----EEEEEECCCC----H---HHHHHHHHHHHHCT---------T
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCC----eEEEEEcCCC----h---hHHHHHHHHHhhcC---------C
Confidence 5799999999 9999999999999998866 65 4688777542 2 44577777887642 3
Q ss_pred EEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 79 IRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
++++.+.++.+++..+|+.||+++.||..|||+++ || |+|||+|+.||.+.
T Consensus 312 ~~~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~--G~Pvi~s~~~~~~e 367 (439)
T 3fro_A 312 VKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCL--GAIPIASAVGGLRD 367 (439)
T ss_dssp EEEECSCCCHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHT--TCEEEEESSTHHHH
T ss_pred EEEEcCCCCHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHC--CCCeEEcCCCCcce
Confidence 66778889999999999999999999999999997 88 99999999999763
No 8
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.52 E-value=9.1e-14 Score=112.85 Aligned_cols=113 Identities=20% Similarity=0.307 Sum_probs=90.4
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
.+|++++|+++.||++..++|++.+.+++|++ .|+.+|.....+ + +..+.+++++.+.+. -..|.+
T Consensus 232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g~~~~-~---~~~~~l~~~~~~~~~------~~~V~~ 297 (416)
T 2x6q_A 232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGV----QLLLVGVMAHDD-P---EGWIYFEKTLRKIGE------DYDVKV 297 (416)
T ss_dssp CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTC----EEEEEECCCTTC-H---HHHHHHHHHHHHHTT------CTTEEE
T ss_pred cEEEEEeccccccCHHHHHHHHHHHHHhCCCe----EEEEEecCcccc-h---hHHHHHHHHHHHhCC------CCcEEE
Confidence 57999999999999999999999999999976 588777653221 2 234556667776543 124655
Q ss_pred Ee--CCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCcc
Q psy9724 82 IY--GCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNR 130 (140)
Q Consensus 82 ~~--~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~ 130 (140)
.- ...+.+++..+|+.||+++.||..|||+++ || |+|||+|+.||++
T Consensus 298 ~G~~~~~~~~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~--G~PvI~~~~~g~~ 351 (416)
T 2x6q_A 298 LTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWK--GKPVIGRAVGGIK 351 (416)
T ss_dssp EEGGGTCCHHHHHHHHHHCSEEEECCSSCSSCHHHHHHHHT--TCCEEEESCHHHH
T ss_pred ecccCCCCHHHHHHHHHhCCEEEECCCcCCCccHHHHHHHc--CCCEEEccCCCCh
Confidence 32 356789999999999999999999999998 88 9999999999876
No 9
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.51 E-value=2.2e-14 Score=123.70 Aligned_cols=106 Identities=14% Similarity=0.115 Sum_probs=82.8
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
.+|++|+|+++.||++..++|+++++++++ .|+.+|... . .....+..+..+.+. -+.
T Consensus 328 p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~------~l~l~G~G~----~---~~~~~~~~~~~~~~~--------~v~- 385 (536)
T 3vue_A 328 PLIAFIGRLEEQKGPDVMAAAIPELMQEDV------QIVLLGTGK----K---KFEKLLKSMEEKYPG--------KVR- 385 (536)
T ss_dssp CEEEEECCBSGGGCHHHHHHHHHHHTTSSC------EEEEECCBC----H---HHHHHHHHHHHHSTT--------TEE-
T ss_pred cEEEEEeeccccCChHHHHHHHHHhHhhCC------eEEEEeccC----c---hHHHHHHHHHhhcCC--------ceE-
Confidence 589999999999999999999999987554 355555431 2 233444445544321 243
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
+....+.+++..+|+.||++++||.+|||+++ || |+|||+|++||++-
T Consensus 386 ~~~~~~~~~~~~~~~~aD~~v~PS~~E~fgl~~lEAma~--G~PvI~s~~gG~~e 438 (536)
T 3vue_A 386 AVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRY--GTPCACASTGGLVD 438 (536)
T ss_dssp EECSCCHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHT--TCCEEECSCTHHHH
T ss_pred EEEeccHHHHHHHHHhhheeecccccCCCCHHHHHHHHc--CCCEEEcCCCCchh
Confidence 36678999999999999999999999999998 88 99999999999873
No 10
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=99.49 E-value=1.4e-13 Score=113.94 Aligned_cols=106 Identities=11% Similarity=0.136 Sum_probs=87.7
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
++|++++|+++.||++..++|++++.+ + ++.|+.+|... + .+.+++++++.+.+ ..|++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g~----~---~~~~~l~~~~~~~~--------~~v~~ 350 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVS--L----GGRLVVLGAGD----V---ALEGALLAAASRHH--------GRVGV 350 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHH--T----TCEEEEEECBC----H---HHHHHHHHHHHHTT--------TTEEE
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHh--c----CceEEEEeCCc----h---HHHHHHHHHHHhCC--------CcEEE
Confidence 489999999999999999999999976 2 45788888542 1 35677777887642 24666
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
+.+. +.+++..+|+.||++++||..|||+++ || |+|||+|++||++.
T Consensus 351 ~~g~-~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~--G~PvI~s~~gg~~e 402 (485)
T 1rzu_A 351 AIGY-NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRY--GCIPVVARTGGLAD 402 (485)
T ss_dssp EESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH--TCEEEEESSHHHHH
T ss_pred ecCC-CHHHHHHHHhcCCEEEECcccCCCCHHHHHHHHC--CCCEEEeCCCChhh
Confidence 6766 889889999999999999999999997 89 99999999999763
No 11
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=99.48 E-value=1.5e-13 Score=113.91 Aligned_cols=105 Identities=21% Similarity=0.166 Sum_probs=87.4
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
.+|++++|+++.||++..++|++++.+ + ++.|+.+|... . .+.+++++++.+.+ ..|.+
T Consensus 293 ~~i~~vGrl~~~Kg~~~li~a~~~l~~--~----~~~l~ivG~g~----~---~~~~~l~~~~~~~~--------~~v~~ 351 (485)
T 2qzs_A 293 PLFAVVSRLTSQKGLDLVLEALPGLLE--Q----GGQLALLGAGD----P---VLQEGFLAAAAEYP--------GQVGV 351 (485)
T ss_dssp CEEEEEEEESGGGCHHHHHHHHHHHHH--T----TCEEEEEEEEC----H---HHHHHHHHHHHHST--------TTEEE
T ss_pred eEEEEeccCccccCHHHHHHHHHHHhh--C----CcEEEEEeCCc----h---HHHHHHHHHHHhCC--------CcEEE
Confidence 589999999999999999999999976 2 45688887542 1 35667777777642 24666
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCcc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNR 130 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~ 130 (140)
+.+. +.+++..+|+.||++++||..|||+++ || |+|||+|++||++
T Consensus 352 ~~g~-~~~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~--G~PvI~s~~gg~~ 402 (485)
T 2qzs_A 352 QIGY-HEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKY--GTLPLVRRTGGLA 402 (485)
T ss_dssp EESC-CHHHHHHHHHHCSEEEECCSCCSSCSHHHHHHHH--TCEEEEESSHHHH
T ss_pred eCCC-CHHHHHHHHHhCCEEEECCccCCCcHHHHHHHHC--CCCEEECCCCCcc
Confidence 6776 889999999999999999999999998 89 9999999999976
No 12
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.48 E-value=6.8e-14 Score=116.69 Aligned_cols=118 Identities=17% Similarity=0.177 Sum_probs=92.6
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC-----Ch-hHHHHHHHHHHHHHHHHhcCCCCCC
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT-----DV-KEYQDLKEEMDQLVGRINGRFTTPN 75 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~-----~~-~~y~~~~~~l~~lv~~IN~~~g~~~ 75 (140)
++|++++|+++.||++..++|++.+.+++|+. +.|+.+|..... .. ....++.+++++++.+.+
T Consensus 263 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~---~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~~~~~~~------- 332 (499)
T 2r60_A 263 PAIIASSRLDQKKNHYGLVEAYVQNKELQDKA---NLVLTLRGIENPFEDYSRAGQEEKEILGKIIELIDNND------- 332 (499)
T ss_dssp CEEEECSCCCGGGCHHHHHHHHHTCHHHHHHC---EEEEEESSCSBTTTBCTTSCHHHHHHHHHHHHHHHHTT-------
T ss_pred cEEEEeecCccccCHHHHHHHHHHHHHhCCCc---eEEEEECCCCCcccccccccccchHHHHHHHHHHHhcC-------
Confidence 57999999999999999999999998877753 356666652111 00 222355788888888753
Q ss_pred cccEEEEeCCCCHHHHHHHHHHc----CEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 76 WSPIRYIYGCISQDELASFYRDA----AVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 76 ~~pv~~~~~~~~~~el~aly~~A----Dv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
..+-+.+.+.++.+++..+|+.| |++++||..|||+++ || |.|||+|++||++.
T Consensus 333 l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~--G~PvI~s~~~g~~e 395 (499)
T 2r60_A 333 CRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMAS--GLPAVVTRNGGPAE 395 (499)
T ss_dssp CBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHT--TCCEEEESSBHHHH
T ss_pred CCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHc--CCCEEEecCCCHHH
Confidence 23323447899999999999999 999999999999997 88 99999999999763
No 13
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.46 E-value=2.7e-13 Score=108.03 Aligned_cols=106 Identities=14% Similarity=0.228 Sum_probs=86.5
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
.+|++++|+++.||++..++|++++.+++|++ .|+.+|... ..+++++++..++ ..|.
T Consensus 199 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~g~---------~~~~l~~~~~~~~--------~~v~- 256 (394)
T 3okp_A 199 PVIACNSRLVPRKGQDSLIKAMPQVIAARPDA----QLLIVGSGR---------YESTLRRLATDVS--------QNVK- 256 (394)
T ss_dssp CEEEEESCSCGGGCHHHHHHHHHHHHHHSTTC----EEEEECCCT---------THHHHHHHTGGGG--------GGEE-
T ss_pred eEEEEEeccccccCHHHHHHHHHHHHhhCCCe----EEEEEcCch---------HHHHHHHHHhccc--------CeEE-
Confidence 68999999999999999999999999999876 577777431 1334444553221 2354
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCC-------CCCcee-----eecCCceeeecCCCCccc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLR-------DEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~r-------dGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
+.+.++.+++..+|+.||+++.||.. |||+++ || |.|+|+|..||.+.
T Consensus 257 ~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~--G~PvI~~~~~~~~e 316 (394)
T 3okp_A 257 FLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQAC--GVPVIAGTSGGAPE 316 (394)
T ss_dssp EEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHT--TCCEEECSSTTGGG
T ss_pred EcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHc--CCCEEEeCCCChHH
Confidence 47889999999999999999999999 999997 78 99999999999874
No 14
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=99.45 E-value=1.2e-13 Score=125.06 Aligned_cols=118 Identities=13% Similarity=0.151 Sum_probs=94.1
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC--CCChhHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS--RTDVKEYQDLKEEMDQLVGRINGRFTTPNWSP 78 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~ps--r~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~p 78 (140)
+.+|++++|+++.||++..++|++++.+.+|++ .|+.+|... .....+..+..+++.+++++.+- ..-
T Consensus 572 ~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v----~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL------~~~ 641 (816)
T 3s28_A 572 KPILFTMARLDRVKNLSGLVEWYGKNTRLRELA----NLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKL------NGQ 641 (816)
T ss_dssp SCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHC----EEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTC------BBB
T ss_pred CeEEEEEccCcccCCHHHHHHHHHHHHhhCCCe----EEEEEeCCCcccccchhhHHHHHHHHHHHHHcCC------CCc
Confidence 358999999999999999999999998887765 588888754 22233444667888888887542 123
Q ss_pred EEEEeC----CCCHHHHHHHHH-HcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 79 IRYIYG----CISQDELASFYR-DAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 79 v~~~~~----~~~~~el~aly~-~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
|.| .+ .++.+|+..+|+ +||++++||..|||+++ || |+|||+|++||++.
T Consensus 642 V~f-lG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~--G~PVIasd~GG~~E 701 (816)
T 3s28_A 642 FRW-ISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTC--GLPTFATCKGGPAE 701 (816)
T ss_dssp EEE-ECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHT--TCCEEEESSBTHHH
T ss_pred EEE-ccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHc--CCCEEEeCCCChHH
Confidence 544 55 456799999999 68999999999999998 89 99999999999763
No 15
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.42 E-value=5e-13 Score=105.84 Aligned_cols=101 Identities=14% Similarity=0.133 Sum_probs=82.2
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
++|++++|+++.||++..++|++++ ++.|+.+|... . .+++++++.+.+ ..|+|
T Consensus 163 ~~i~~vG~~~~~Kg~~~li~a~~~~---------~~~l~i~G~g~--~-------~~~l~~~~~~~~--------~~v~~ 216 (342)
T 2iuy_A 163 DFLLFMGRVSPHKGALEAAAFAHAC---------GRRLVLAGPAW--E-------PEYFDEITRRYG--------STVEP 216 (342)
T ss_dssp SCEEEESCCCGGGTHHHHHHHHHHH---------TCCEEEESCCC--C-------HHHHHHHHHHHT--------TTEEE
T ss_pred CEEEEEeccccccCHHHHHHHHHhc---------CcEEEEEeCcc--c-------HHHHHHHHHHhC--------CCEEE
Confidence 4689999999999999999999986 34577777542 1 334455666543 23554
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCC----------CCCCcee-----eecCCceeeecCCCCccc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPL----------RDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~----------rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
.+.++.+|+..+|+.||+++.||. .|||+++ || |+|+|+|+.||.+.
T Consensus 217 -~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~--G~PvI~s~~~~~~e 278 (342)
T 2iuy_A 217 -IGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVS--GTPVVGTGNGCLAE 278 (342)
T ss_dssp -CCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHT--TCCEEECCTTTHHH
T ss_pred -eccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhc--CCCEEEcCCCChHH
Confidence 899999999999999999999999 8999997 88 99999999999763
No 16
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.38 E-value=1.2e-12 Score=96.04 Aligned_cols=107 Identities=21% Similarity=0.319 Sum_probs=80.8
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
+++|++++|+++.||++..++|++++ |++ .|+.+|..... +++.+++.+++.... ..|.
T Consensus 23 ~~~i~~~G~~~~~Kg~~~li~a~~~l----~~~----~l~i~G~~~~~---------~~l~~~~~~~~~~l~----~~v~ 81 (177)
T 2f9f_A 23 GDFWLSVNRIYPEKRIELQLEVFKKL----QDE----KLYIVGWFSKG---------DHAERYARKIMKIAP----DNVK 81 (177)
T ss_dssp CSCEEEECCSSGGGTHHHHHHHHHHC----TTS----CEEEEBCCCTT---------STHHHHHHHHHHHSC----TTEE
T ss_pred CCEEEEEeccccccCHHHHHHHHHhC----CCc----EEEEEecCccH---------HHHHHHHHhhhcccC----CcEE
Confidence 35799999999999999999999887 544 57777754321 123334442111011 1354
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
+ .+.++.+|+..+|+.||++++||..||++++ || |.|+|+|..||.+.
T Consensus 82 ~-~g~~~~~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~--G~PvI~~~~~~~~e 134 (177)
T 2f9f_A 82 F-LGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMAS--GKPVIAVNEGGFKE 134 (177)
T ss_dssp E-EESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHT--TCCEEEESSHHHHH
T ss_pred E-eCCCCHHHHHHHHHhCCEEEeCCCcCCCChHHHHHHHc--CCcEEEeCCCCHHH
Confidence 4 6899999999999999999999999999986 88 99999999998753
No 17
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.38 E-value=9.3e-13 Score=111.23 Aligned_cols=102 Identities=14% Similarity=0.144 Sum_probs=83.9
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcc-cEEE
Q psy9724 3 LVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS-PIRY 81 (140)
Q Consensus 3 iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~-pv~~ 81 (140)
++++++|+.+ ||++..++||.++++++|++ .|+.+|.. + ..++++++++.+.+ .. +-+.
T Consensus 378 ~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~----~l~i~G~~--g------~~~~~l~~~~~~~~-------l~~~~v~ 437 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQSMARMLAVLREVPDS----VLWLLSGP--G------EADARLRAFAHAQG-------VDAQRLV 437 (568)
T ss_dssp CEEEECCCGG-GCCHHHHHHHHHHHHHCTTC----EEEEECCS--T------THHHHHHHHHHHTT-------CCGGGEE
T ss_pred EEEEeCCccc-cCCHHHHHHHHHHHHhCCCc----EEEEecCC--H------HHHHHHHHHHHHcC-------CChhHEE
Confidence 5779999999 99999999999999999986 57777731 1 23456667776642 22 2234
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeee-------cCCC
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIK-------SAPS 127 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~-------~~~g 127 (140)
+.+.++.+++..+|+.|||++.||.+ ||+++ || |+|||+ |++|
T Consensus 438 ~~g~~~~~~~~~~~~~adv~v~ps~~-~~g~~~lEAma~--G~Pvv~~~g~~~~s~~~ 492 (568)
T 2vsy_A 438 FMPKLPHPQYLARYRHADLFLDTHPY-NAHTTASDALWT--GCPVLTTPGETFAARVA 492 (568)
T ss_dssp EECCCCHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHT--TCCEEBCCCSSGGGSHH
T ss_pred eeCCCCHHHHHHHHhcCCEEeeCCCC-CCcHHHHHHHhC--CCCEEeccCCCchHHHH
Confidence 58899999999999999999999999 99998 88 999999 9999
No 18
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.37 E-value=1.1e-12 Score=104.98 Aligned_cols=104 Identities=23% Similarity=0.322 Sum_probs=84.8
Q ss_pred EEEEEecCc-cccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 2 SLVLSVDRL-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 2 ~iil~VdRl-d~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
++|++++|+ ++.||++..++|++++.+++|++ .|+.+|... . +++.+++.+. ...|.
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~----~l~i~G~~~-----~-----~~l~~~~~~~--------~~~v~ 266 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDV----EILIVGRGD-----E-----DELREQAGDL--------AGHLR 266 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTC----EEEEESCSC-----H-----HHHHHHTGGG--------GGGEE
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCe----EEEEEcCCc-----H-----HHHHHHHHhc--------cCcEE
Confidence 589999999 99999999999999999998865 577776532 1 3334444432 12354
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCC-CCCCcee-----eecCCceeeecCCCCcc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPL-RDEWSNS-----FSRSGNFRIKSAPSGNR 130 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~-rdGmnLv-----A~~~G~~~v~~~~gg~~ 130 (140)
+.+.++.+|+..+|+.||+++.||. .|||+++ || |.|+|+|..||.+
T Consensus 267 -~~g~~~~~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~--G~PvI~~~~~~~~ 319 (406)
T 2gek_A 267 -FLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAA--GTAVVASDLDAFR 319 (406)
T ss_dssp -ECCSCCHHHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHH--TCEEEECCCHHHH
T ss_pred -EEecCCHHHHHHHHHHCCEEEecCCCCCCCchHHHHHHHc--CCCEEEecCCcHH
Confidence 4889999999999999999999996 9999987 88 9999999999876
No 19
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.30 E-value=6.7e-12 Score=104.47 Aligned_cols=102 Identities=10% Similarity=0.142 Sum_probs=79.3
Q ss_pred EEEEEecCc-cccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 2 SLVLSVDRL-DYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 2 ~iil~VdRl-d~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
+.|++++|+ .+.||++..++||+.+.+++|+. .++.|+.+|..... .+.+- ...|+
T Consensus 242 ~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~-~~~~l~ivG~~~~~--------------------~~l~~--~~~v~ 298 (413)
T 2x0d_A 242 KIILVYGRPSVKRNAFTLIVEALKIFVQKYDRS-NEWKIISVGEKHKD--------------------IALGK--GIHLN 298 (413)
T ss_dssp SEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTG-GGCEEEEEESCCCC--------------------EEEET--TEEEE
T ss_pred CEEEEEecCchhccCHHHHHHHHHHHHHhCCCC-CceEEEEEcCCchh--------------------hhcCC--cCcEE
Confidence 468899996 68999999999999999999861 12468877754211 01111 12354
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCcc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNR 130 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~ 130 (140)
+.+.++.+|+..+|+.||++++||..|||+++ || |+|||++ .||.+
T Consensus 299 -f~G~~~~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~--G~PVV~~-~~g~~ 349 (413)
T 2x0d_A 299 -SLGKLTLEDYADLLKRSSIGISLMISPHPSYPPLEMAHF--GLRVITN-KYENK 349 (413)
T ss_dssp -EEESCCHHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHT--TCEEEEE-CBTTB
T ss_pred -EcCCCCHHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhC--CCcEEEe-CCCcc
Confidence 47899999999999999999999999999997 99 9999995 56654
No 20
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.28 E-value=3.1e-12 Score=101.43 Aligned_cols=106 Identities=15% Similarity=0.227 Sum_probs=82.0
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccE
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPI 79 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~-~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv 79 (140)
+.+|++++|+++.||++..++|++++.++ +|+ +.|+.+|... . +++++++.+.+- -..|
T Consensus 196 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~----~~l~i~G~g~--~--------~~~~~~~~~~~~------~~~v 255 (374)
T 2iw1_A 196 QNLLLQVGSDFGRKGVDRSIEALASLPESLRHN----TLLFVVGQDK--P--------RKFEALAEKLGV------RSNV 255 (374)
T ss_dssp CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHT----EEEEEESSSC--C--------HHHHHHHHHHTC------GGGE
T ss_pred CeEEEEeccchhhcCHHHHHHHHHHhHhccCCc----eEEEEEcCCC--H--------HHHHHHHHHcCC------CCcE
Confidence 36899999999999999999999998776 454 4677777642 1 233445555421 1236
Q ss_pred EEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 80 RYIYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 80 ~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
.+ .+. .+++..+|+.||+++.||..|||+++ || |+|+|+|+.||.+.
T Consensus 256 ~~-~g~--~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~--G~Pvi~~~~~~~~e 307 (374)
T 2iw1_A 256 HF-FSG--RNDVSELMAAADLLLHPAYQEAAGIVLLEAITA--GLPVLTTAVCGYAH 307 (374)
T ss_dssp EE-ESC--CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHH--TCCEEEETTSTTTH
T ss_pred EE-CCC--cccHHHHHHhcCEEEeccccCCcccHHHHHHHC--CCCEEEecCCCchh
Confidence 55 444 46799999999999999999999997 88 99999999999763
No 21
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.27 E-value=3.7e-12 Score=102.65 Aligned_cols=105 Identities=16% Similarity=0.221 Sum_probs=81.0
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
.+|++++|+++.||++..++|++.+.++ ++ +.|+.+|... + .+++++++.+.+- -..|.+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~----~~l~i~G~g~-----~----~~~l~~~~~~~~l------~~~v~~ 271 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTE-VD----AKLLLVGDGP-----E----FCTILQLVKNLHI------EDRVLF 271 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHS-SC----CEEEEECCCT-----T----HHHHHHHHHTTTC------GGGBCC
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhh-CC----CEEEEECCch-----H----HHHHHHHHHHcCC------CCeEEE
Confidence 4799999999999999999999999876 33 4677777431 1 3445666665321 022444
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCccc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~~ 131 (140)
.+. .+++..+|+.||+++.||..|||+++ || |+|+|+|+.||.+.
T Consensus 272 -~g~--~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~--G~PvI~~~~~~~~e 321 (394)
T 2jjm_A 272 -LGK--QDNVAELLAMSDLMLLLSEKESFGLVLLEAMAC--GVPCIGTRVGGIPE 321 (394)
T ss_dssp -CBS--CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHT--TCCEEEECCTTSTT
T ss_pred -eCc--hhhHHHHHHhCCEEEeccccCCCchHHHHHHhc--CCCEEEecCCChHH
Confidence 443 57789999999999999999999997 88 99999999999864
No 22
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.07 E-value=2.2e-10 Score=94.51 Aligned_cols=88 Identities=13% Similarity=0.213 Sum_probs=70.1
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcc-cEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS-PIR 80 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~-pv~ 80 (140)
++|++++|+.+.||+ ++.+.+.+|++ .|+.+|... +.+ .+.. -|.
T Consensus 223 ~~i~~vGrl~~~Kg~------~~~l~~~~~~~----~l~ivG~g~-----------------~~~-------~~l~~~V~ 268 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF------FVVASKAFPQV----TFHVIGSGM-----------------GRH-------PGYGDNVI 268 (406)
T ss_dssp EEEEEECCTTBCHHH------HHHHHHHCTTE----EEEEESCSS-----------------CCC-------TTCCTTEE
T ss_pred cEEEEEeccccccCH------HHHHHHhCCCe----EEEEEeCch-----------------HHh-------cCCCCCEE
Confidence 689999999999999 56666778764 577777432 111 1222 354
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee------------eecCCceeeecCC
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS------------FSRSGNFRIKSAP 126 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv------------A~~~G~~~v~~~~ 126 (140)
+.+.++.+++..+|+.||++++||..|||+++ || |+|||+|++
T Consensus 269 -f~G~~~~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~--G~PVIas~~ 323 (406)
T 2hy7_A 269 -VYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFF--GLPAVCPNA 323 (406)
T ss_dssp -EECCCCHHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHH--TCCEEEEGG
T ss_pred -EcCCCCHHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhC--CCcEEEehh
Confidence 47999999999999999999999999999985 78 999999986
No 23
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=99.00 E-value=3.6e-10 Score=100.98 Aligned_cols=50 Identities=14% Similarity=0.296 Sum_probs=44.1
Q ss_pred EEEEeCCCCHH------HHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCcc
Q psy9724 79 IRYIYGCISQD------ELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNR 130 (140)
Q Consensus 79 v~~~~~~~~~~------el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~ 130 (140)
|+|+.+.++.. ++..+|+.||++++||.+|||+++ || |+|||+|++||.+
T Consensus 494 VIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~--G~PvI~s~~gG~~ 554 (725)
T 3nb0_A 494 MIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVM--GVPSITTNVSGFG 554 (725)
T ss_dssp EEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHHHT--TCCEEEETTBHHH
T ss_pred EEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHHHc--CCCEEEeCCCChh
Confidence 56666667765 588999999999999999999998 88 9999999999975
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.99 E-value=1.5e-09 Score=86.59 Aligned_cols=103 Identities=9% Similarity=0.104 Sum_probs=76.2
Q ss_pred EEEEEecCcccc-CCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 2 SLVLSVDRLDYT-KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 2 ~iil~VdRld~~-KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
.++++++|++.. ||+...++|++++.+++|++ .|+.++.+. + .++++++++++. ...|.
T Consensus 207 ~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~----~l~i~~g~~----~---~~~~~l~~~~~~---------~~~v~ 266 (384)
T 1vgv_A 207 MILVTGHRRESFGRGFEEICHALADIATTHQDI----QIVYPVHLN----P---NVREPVNRILGH---------VKNVI 266 (384)
T ss_dssp EEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTE----EEEEECCBC----H---HHHHHHHHHHTT---------CTTEE
T ss_pred EEEEEeCCccccchHHHHHHHHHHHHHhhCCCe----EEEEEcCCC----H---HHHHHHHHHhhc---------CCCEE
Confidence 367899999987 99999999999999999865 354433321 1 234555555421 12465
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee---eecCCceeeecCC-CCcc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS---FSRSGNFRIKSAP-SGNR 130 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv---A~~~G~~~v~~~~-gg~~ 130 (140)
+ .+.++.+++..+|+.||+++.+| .|+ +. || |+|+|+|.. ||.+
T Consensus 267 ~-~g~~~~~~~~~~~~~ad~~v~~S--g~~-~lEA~a~--G~PvI~~~~~~~~~ 314 (384)
T 1vgv_A 267 L-IDPQEYLPFVWLMNHAWLILTDS--GGI-QEEAPSL--GKPVLVMRDTTERP 314 (384)
T ss_dssp E-ECCCCHHHHHHHHHHCSEEEESS--STG-GGTGGGG--TCCEEEESSCCSCH
T ss_pred E-eCCCCHHHHHHHHHhCcEEEECC--cch-HHHHHHc--CCCEEEccCCCCcc
Confidence 4 67788899999999999999999 444 43 78 999999986 8865
No 25
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.85 E-value=5.4e-09 Score=83.54 Aligned_cols=103 Identities=10% Similarity=0.064 Sum_probs=76.5
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
.++++++|++..||+...++|++++.+++|++ .++.++.+. . .++++++++++. ...|.+
T Consensus 200 ~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~----~lv~~~g~~----~---~~~~~l~~~~~~---------~~~v~~ 259 (376)
T 1v4v_A 200 YVTVTMHRRENWPLLSDLAQALKRVAEAFPHL----TFVYPVHLN----P---VVREAVFPVLKG---------VRNFVL 259 (376)
T ss_dssp EEEECCCCGGGGGGHHHHHHHHHHHHHHCTTS----EEEEECCSC----H---HHHHHHHHHHTT---------CTTEEE
T ss_pred EEEEEeCcccchHHHHHHHHHHHHHHhhCCCe----EEEEECCCC----H---HHHHHHHHHhcc---------CCCEEE
Confidence 46778999999999999999999999999976 344433321 1 234555555421 124544
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee---eecCCceeeec-CCCCcc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS---FSRSGNFRIKS-APSGNR 130 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv---A~~~G~~~v~~-~~gg~~ 130 (140)
.+.++..++..+|+.||+++.+| +|+ +. || |.|+|++ .+||.+
T Consensus 260 -~g~~g~~~~~~~~~~ad~~v~~S--~g~-~lEA~a~--G~PvI~~~~~~~~~ 306 (376)
T 1v4v_A 260 -LDPLEYGSMAALMRASLLLVTDS--GGL-QEEGAAL--GVPVVVLRNVTERP 306 (376)
T ss_dssp -ECCCCHHHHHHHHHTEEEEEESC--HHH-HHHHHHT--TCCEEECSSSCSCH
T ss_pred -ECCCCHHHHHHHHHhCcEEEECC--cCH-HHHHHHc--CCCEEeccCCCcch
Confidence 67788889999999999999999 788 52 88 9999987 578865
No 26
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.82 E-value=8.3e-09 Score=81.92 Aligned_cols=102 Identities=10% Similarity=0.162 Sum_probs=73.9
Q ss_pred EEEEecCcccc-CCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 3 LVLSVDRLDYT-KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 3 iil~VdRld~~-KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
++++++|++.. ||+...++|++++.+++|+++ ++....| + . +++++++++++. ...|++
T Consensus 208 vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~----~i~~~g~---~-~---~~~~~~~~~~~~---------~~~v~~ 267 (375)
T 3beo_A 208 VLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQ----VVYPVHM---N-P---VVRETANDILGD---------YGRIHL 267 (375)
T ss_dssp EEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEE----EEEECCS---C-H---HHHHHHHHHHTT---------CTTEEE
T ss_pred EEEEecccccchhHHHHHHHHHHHHHhhCCCeE----EEEeCCC---C-H---HHHHHHHHHhhc---------cCCEEE
Confidence 67799999986 999999999999999998753 3322222 1 1 344555555321 123544
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee---eecCCceeeecC-CCCcc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS---FSRSGNFRIKSA-PSGNR 130 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv---A~~~G~~~v~~~-~gg~~ 130 (140)
.+.++.+++..+|+.||+++.+| .|+ +. || |+|||+|. +||.+
T Consensus 268 -~g~~~~~~~~~~~~~ad~~v~~s--g~~-~lEA~a~--G~Pvi~~~~~~~~~ 314 (375)
T 3beo_A 268 -IEPLDVIDFHNVAARSYLMLTDS--GGV-QEEAPSL--GVPVLVLRDTTERP 314 (375)
T ss_dssp -ECCCCHHHHHHHHHTCSEEEECC--HHH-HHHHHHH--TCCEEECSSCCSCH
T ss_pred -eCCCCHHHHHHHHHhCcEEEECC--CCh-HHHHHhc--CCCEEEecCCCCCc
Confidence 67889999999999999999999 333 32 88 99999996 48864
No 27
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.65 E-value=6.5e-08 Score=79.06 Aligned_cols=109 Identities=12% Similarity=0.021 Sum_probs=71.2
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCC--CCcccEE
Q psy9724 3 LVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTT--PNWSPIR 80 (140)
Q Consensus 3 iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~--~~~~pv~ 80 (140)
+++++.+ .-||++..++||+++.+++|++ .|+.+|.. ++ ..+++++++.+.+-.+.. .+...|
T Consensus 198 vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~----~lvivG~g-----~~---~~~~l~~~~~~~gl~~~~~~~~~~~v- 262 (374)
T 2xci_A 198 FIVAGSI--HTGEVEIILKAFKEIKKTYSSL----KLILVPRH-----IE---NAKIFEKKARDFGFKTSFFENLEGDV- 262 (374)
T ss_dssp EEEEEEE--CGGGHHHHHHHHHHHHTTCTTC----EEEEEESS-----GG---GHHHHHHHHHHTTCCEEETTCCCSSE-
T ss_pred EEEEEeC--CCchHHHHHHHHHHHHhhCCCc----EEEEECCC-----HH---HHHHHHHHHHHCCCceEEecCCCCcE-
Confidence 5666665 3589999999999999999987 47777632 11 113456666654432110 000234
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECC-CCCC--Ccee---eecCCceeeec-CCCCcc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTP-LRDE--WSNS---FSRSGNFRIKS-APSGNR 130 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts-~rdG--mnLv---A~~~G~~~v~~-~~gg~~ 130 (140)
++.+. .+|+..+|+.||+++++| +.++ +|+. || |.|||++ .+||.+
T Consensus 263 ~~~~~--~~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~--G~PVI~~~~~~~~~ 315 (374)
T 2xci_A 263 ILVDR--FGILKELYPVGKIAIVGGTFVNIGGHNLLEPTCW--GIPVIYGPYTHKVN 315 (374)
T ss_dssp EECCS--SSCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTT--TCCEEECSCCTTSH
T ss_pred EEECC--HHHHHHHHHhCCEEEECCcccCCCCcCHHHHHHh--CCCEEECCCccChH
Confidence 44443 468999999999988876 4454 4443 88 9999975 777754
No 28
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=98.49 E-value=2e-07 Score=73.69 Aligned_cols=99 Identities=12% Similarity=0.005 Sum_probs=68.6
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEE
Q psy9724 3 LVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYI 82 (140)
Q Consensus 3 iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~ 82 (140)
+++..+|+.+.||.+..++|++++.+ ++.++.++++.. + +++.+++.+.+ ...|.+
T Consensus 186 il~~~g~~~~~k~~~~li~a~~~l~~-------~~~~l~i~G~~~-----~----~~l~~~~~~~~-------~~~v~~- 241 (364)
T 1f0k_A 186 VLVVGGSQGARILNQTMPQVAAKLGD-------SVTIWHQSGKGS-----Q----QSVEQAYAEAG-------QPQHKV- 241 (364)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHHGG-------GEEEEEECCTTC-----H----HHHHHHHHHTT-------CTTSEE-
T ss_pred EEEEcCchHhHHHHHHHHHHHHHhcC-------CcEEEEEcCCch-----H----HHHHHHHhhcC-------CCceEE-
Confidence 55667899999999999999998843 345444433321 1 34455555532 123554
Q ss_pred eCCCCHHHHHHHHHHcCEEEECCCCCCCcee---eecCCceeeecCCCCccc
Q psy9724 83 YGCISQDELASFYRDAAVALVTPLRDEWSNS---FSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 83 ~~~~~~~el~aly~~ADv~vvts~rdGmnLv---A~~~G~~~v~~~~gg~~~ 131 (140)
.+.+ +++..+|+.||+++.+|- |+-+. || |+|+|++..||.+.
T Consensus 242 ~g~~--~~~~~~~~~ad~~v~~sg--~~~~~EAma~--G~Pvi~~~~~g~~~ 287 (364)
T 1f0k_A 242 TEFI--DDMAAAYAWADVVVCRSG--ALTVSEIAAA--GLPALFVPFQHKDR 287 (364)
T ss_dssp ESCC--SCHHHHHHHCSEEEECCC--HHHHHHHHHH--TCCEEECCCCCTTC
T ss_pred ecch--hhHHHHHHhCCEEEECCc--hHHHHHHHHh--CCCEEEeeCCCCch
Confidence 5666 678999999999999992 33333 88 99999999998754
No 29
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.21 E-value=6.8e-06 Score=67.68 Aligned_cols=101 Identities=16% Similarity=0.158 Sum_probs=69.9
Q ss_pred EEEEecCccc-cCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 3 LVLSVDRLDY-TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 3 iil~VdRld~-~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
+++...|... -|++...++|++++.+++|++ .++..+.+. + ++++.++++. + . ...|.
T Consensus 233 vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~----~~v~~~g~~----~---~~~~~l~~~~---~----~--~~~v~- 291 (396)
T 3dzc_A 233 ILVTGHRRESFGGGFERICQALITTAEQHPEC----QILYPVHLN----P---NVREPVNKLL---K----G--VSNIV- 291 (396)
T ss_dssp EEEECSCBCCCTTHHHHHHHHHHHHHHHCTTE----EEEEECCBC----H---HHHHHHHHHT---T----T--CTTEE-
T ss_pred EEEEECCcccchhHHHHHHHHHHHHHHhCCCc----eEEEEeCCC----h---HHHHHHHHHH---c----C--CCCEE-
Confidence 4556667543 378999999999999999975 344433332 1 2344444432 1 1 23454
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeec-CCCCcc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKS-APSGNR 130 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~-~~gg~~ 130 (140)
+.+++...++..+|+.||+++.+| | |+. || |.|+|.+ +.|+.+
T Consensus 292 ~~~~lg~~~~~~l~~~ad~vv~~S---G-g~~~EA~a~--G~PvV~~~~~~~~~ 339 (396)
T 3dzc_A 292 LIEPQQYLPFVYLMDRAHIILTDS---G-GIQEEAPSL--GKPVLVMRETTERP 339 (396)
T ss_dssp EECCCCHHHHHHHHHHCSEEEESC---S-GGGTTGGGG--TCCEEECCSSCSCH
T ss_pred EeCCCCHHHHHHHHHhcCEEEECC---c-cHHHHHHHc--CCCEEEccCCCcch
Confidence 467889999999999999999998 5 654 77 9999998 677753
No 30
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.66 E-value=6.5e-05 Score=62.05 Aligned_cols=103 Identities=10% Similarity=0.163 Sum_probs=70.6
Q ss_pred EEEEecCcccc-CCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 3 LVLSVDRLDYT-KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 3 iil~VdRld~~-KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
+++.++|.+.. |++...++|++++.+++|++ .++..+.|. + ..++.+++..+ .+..|.
T Consensus 227 vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~----~~v~~~~~~----~---~~~~~l~~~~~---------~~~~v~- 285 (403)
T 3ot5_A 227 ILMTAHRRENLGEPMQGMFEAVREIVESREDT----ELVYPMHLN----P---AVREKAMAILG---------GHERIH- 285 (403)
T ss_dssp EEECCCCHHHHTTHHHHHHHHHHHHHHHCTTE----EEEEECCSC----H---HHHHHHHHHHT---------TCTTEE-
T ss_pred EEEEeCcccccCcHHHHHHHHHHHHHHhCCCc----eEEEecCCC----H---HHHHHHHHHhC---------CCCCEE-
Confidence 55677886543 78999999999999999975 344443332 1 23344443321 123454
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee--eecCCceeeec-CCCCcc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS--FSRSGNFRIKS-APSGNR 130 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv--A~~~G~~~v~~-~~gg~~ 130 (140)
+.+.++..++..+|+.||+++..| .|..+= +| |.|+|.+ ++|+.+
T Consensus 286 l~~~l~~~~~~~l~~~ad~vv~~S--Gg~~~EA~a~--g~PvV~~~~~~~~~ 333 (403)
T 3ot5_A 286 LIEPLDAIDFHNFLRKSYLVFTDS--GGVQEEAPGM--GVPVLVLRDTTERP 333 (403)
T ss_dssp EECCCCHHHHHHHHHHEEEEEECC--HHHHHHGGGT--TCCEEECCSSCSCH
T ss_pred EeCCCCHHHHHHHHHhcCEEEECC--ccHHHHHHHh--CCCEEEecCCCcch
Confidence 477889999999999999998888 555432 66 9999998 666643
No 31
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.39 E-value=0.00086 Score=59.34 Aligned_cols=105 Identities=7% Similarity=-0.008 Sum_probs=69.3
Q ss_pred EEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEE-EecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE
Q psy9724 3 LVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQ-IAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY 81 (140)
Q Consensus 3 iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvq-i~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~ 81 (140)
++.+..|. .|..+..++++.++|++.|+. +.++. ++... ... ..+.+++.+ ..|. .-+.
T Consensus 443 ~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s---~L~l~~~g~~~--g~~--~~~~~~~~~--~GI~--------~Rv~- 502 (631)
T 3q3e_A 443 NIGIASTT--MKLNPYFLEALKAIRDRAKVK---VHFHFALGQSN--GIT--HPYVERFIK--SYLG--------DSAT- 502 (631)
T ss_dssp EEEEEECS--TTCCHHHHHHHHHHHHHCSSE---EEEEEEESSCC--GGG--HHHHHHHHH--HHHG--------GGEE-
T ss_pred EEEECCcc--ccCCHHHHHHHHHHHHhCCCc---EEEEEecCCCc--hhh--HHHHHHHHH--cCCC--------ccEE-
Confidence 45566664 689999999999999999973 22222 33211 111 122222211 1121 1244
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-----eecCCceeeecCCCCcc
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS-----FSRSGNFRIKSAPSGNR 130 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-----A~~~G~~~v~~~~gg~~ 130 (140)
+.+.++.++..++|+.|||++.|+-+.| +++ +| |.|||+..-++.+
T Consensus 503 F~g~~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwm--GVPVVTl~G~~~a 553 (631)
T 3q3e_A 503 AHPHSPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTL--GLVGVCKTGAEVH 553 (631)
T ss_dssp EECCCCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHT--TCCEEEECCSSHH
T ss_pred EcCCCCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHc--CCCEEeccCCcHH
Confidence 5788999999999999999999999888 555 77 9999985544433
No 32
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=97.07 E-value=0.018 Score=52.26 Aligned_cols=121 Identities=12% Similarity=0.140 Sum_probs=87.6
Q ss_pred EEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy9724 2 SLVLSVDRLDYTKGLVH-RLKAFETLLE--KHPEHL-EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 77 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~-kl~A~~~~L~--~~P~~~-~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~ 77 (140)
.+++.|-|+..-||.++ .+..++++++ ++|+.. ..+++|..|.+.... ...+.+.+.+..+++-||.. +...
T Consensus 517 l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~d---p~~~ 592 (796)
T 2c4m_A 517 IFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGY-VRAKAIIKLINSIADLVNND---PEVS 592 (796)
T ss_dssp EEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHTC---TTTT
T ss_pred cEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhH-HHHHHHHHHHHHHHHHhccc---cccC
Confidence 46889999999999999 8999999875 677632 257777766654333 33457778889999989972 3333
Q ss_pred c---EEEEeCCCCHHHHHHHHHHcCEEEECCC--CCCCcee---eecCCceeeecCCC
Q psy9724 78 P---IRYIYGCISQDELASFYRDAAVALVTPL--RDEWSNS---FSRSGNFRIKSAPS 127 (140)
Q Consensus 78 p---v~~~~~~~~~~el~aly~~ADv~vvts~--rdGmnLv---A~~~G~~~v~~~~g 127 (140)
. |+|+. ..+.+----+|.+||+.+.+|. .|.-|+- |..-|++.|++--|
T Consensus 593 ~~lKVvFl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 649 (796)
T 2c4m_A 593 PLLKVVFVE-NYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDG 649 (796)
T ss_dssp TTEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESST
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCC
Confidence 3 66654 3344444568999999999999 8888774 66678888866544
No 33
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.07 E-value=0.00078 Score=54.80 Aligned_cols=84 Identities=11% Similarity=0.043 Sum_probs=60.0
Q ss_pred EEEEEecCccccCCHHHHHHHHHHHHHh-CCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 2 SLVLSVDRLDYTKGLVHRLKAFETLLEK-HPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~kl~A~~~~L~~-~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
++|+++|++.... +|+. +|+ +.|+.+|..... + .+ .|+
T Consensus 179 ~~i~yaG~l~k~~-----------~L~~l~~~----~~f~ivG~G~~~-----------------~-------l~--nV~ 217 (339)
T 3rhz_A 179 REIHFPGNPERFS-----------FVKEWKYD----IPLKVYTWQNVE-----------------L-------PQ--NVH 217 (339)
T ss_dssp EEEEECSCTTTCG-----------GGGGCCCS----SCEEEEESCCCC-----------------C-------CT--TEE
T ss_pred cEEEEeCCcchhh-----------HHHhCCCC----CeEEEEeCCccc-----------------C-------cC--CEE
Confidence 5789999998422 2222 344 468888865321 0 11 476
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCC-Cce-------------eeecCCceeeecCCCCccc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDE-WSN-------------SFSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdG-mnL-------------vA~~~G~~~v~~~~gg~~~ 131 (140)
| .+.++.+|++.+|+.||++++. .+| ++. .|| |.|||++..|+++.
T Consensus 218 f-~G~~~~~el~~~l~~~~~~lv~--~~~~~~~y~~~~~P~Kl~eymA~--G~PVI~~~~~~~~~ 277 (339)
T 3rhz_A 218 K-INYRPDEQLLMEMSQGGFGLVW--MDDKDKEYQSLYCSYKLGSFLAA--GIPVIVQEGIANQE 277 (339)
T ss_dssp E-EECCCHHHHHHHHHTEEEEECC--CCGGGHHHHTTCCCHHHHHHHHH--TCCEEEETTCTTTH
T ss_pred E-eCCCCHHHHHHHHHhCCEEEEE--CCCchhHHHHhcChHHHHHHHHc--CCCEEEccChhHHH
Confidence 6 7899999999999999999998 444 331 499 99999999998763
No 34
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=96.88 E-value=0.035 Score=50.36 Aligned_cols=121 Identities=11% Similarity=0.093 Sum_probs=87.1
Q ss_pred EEEEEecCccccCCHHH-HHHHHHHHHH--hCCCCC-CCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy9724 2 SLVLSVDRLDYTKGLVH-RLKAFETLLE--KHPEHL-EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 77 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~-kl~A~~~~L~--~~P~~~-~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~ 77 (140)
.+++.|-|+..-||.++ .+..++++++ ++|+.. ..+++|..|.+.... ...+.+.+.+.++++-||. ++...
T Consensus 527 l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIk~i~~va~~in~---Dp~~~ 602 (796)
T 1l5w_A 527 IFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVADVINN---DPLVG 602 (796)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHHT---CTTTG
T ss_pred ceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhH-HHHHHHHHHHHHHHHHhcc---ccccC
Confidence 46889999999999999 8999998865 466532 257777776654333 3345777888999998987 33344
Q ss_pred c---EEEEeCCCCHHHHHHHHHHcCEEEECCC--CCCCcee---eecCCceeeecCCC
Q psy9724 78 P---IRYIYGCISQDELASFYRDAAVALVTPL--RDEWSNS---FSRSGNFRIKSAPS 127 (140)
Q Consensus 78 p---v~~~~~~~~~~el~aly~~ADv~vvts~--rdGmnLv---A~~~G~~~v~~~~g 127 (140)
. |+|+. ..+.+----+|.+||+.+.+|. .|.-|+- |..-|++.|++--|
T Consensus 603 ~~lKVvfl~-nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDG 659 (796)
T 1l5w_A 603 DKLKVVFLP-DYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDG 659 (796)
T ss_dssp GGEEEEECS-SCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCT
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCC
Confidence 4 65544 3344444568999999999999 8888774 66678888866544
No 35
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=96.74 E-value=0.054 Score=49.27 Aligned_cols=121 Identities=11% Similarity=0.084 Sum_probs=88.0
Q ss_pred EEEEEecCccccCCHHHH-HHHHHHHH--HhCCCCCC-CeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcc
Q psy9724 2 SLVLSVDRLDYTKGLVHR-LKAFETLL--EKHPEHLE-KVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWS 77 (140)
Q Consensus 2 ~iil~VdRld~~KGi~~k-l~A~~~~L--~~~P~~~~-kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~ 77 (140)
.+++.|-|+..-||..+. +..+++++ .++|+.-- .+++|..|.+...+ ...+.+.+.+.++++.+|. ++...
T Consensus 551 l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y-~~aK~iIkli~~va~~in~---Dp~v~ 626 (824)
T 2gj4_A 551 LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGY-HMAKMIIKLITAIGDVVNH---DPVVG 626 (824)
T ss_dssp EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTT---CTTTG
T ss_pred ceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhH-HHHHHHHHHHHHHHHHhcc---CcccC
Confidence 478899999999999998 89999886 36776421 46777766654343 3345777888999999986 34444
Q ss_pred c---EEEEeCCCCHHHHHHHHHHcCEEEECCC--CCCCcee---eecCCceeeecCCC
Q psy9724 78 P---IRYIYGCISQDELASFYRDAAVALVTPL--RDEWSNS---FSRSGNFRIKSAPS 127 (140)
Q Consensus 78 p---v~~~~~~~~~~el~aly~~ADv~vvts~--rdGmnLv---A~~~G~~~v~~~~g 127 (140)
. |+|+. ..+.+----+|.+||+.+.||. .|.-|+- |..-|++.|++-=|
T Consensus 627 ~~lKVvFl~-nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDG 683 (824)
T 2gj4_A 627 DRLRVIFLE-NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDG 683 (824)
T ss_dssp GGEEEEEET-TCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCT
T ss_pred CceEEEEEC-CCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecC
Confidence 4 66654 3344444568999999999999 8888774 66678888887655
No 36
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=95.82 E-value=0.028 Score=46.08 Aligned_cols=99 Identities=12% Similarity=0.095 Sum_probs=61.5
Q ss_pred EEEEEecCcc---ccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHH-hcCCCCCCcc
Q psy9724 2 SLVLSVDRLD---YTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI-NGRFTTPNWS 77 (140)
Q Consensus 2 ~iil~VdRld---~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~I-N~~~g~~~~~ 77 (140)
.+++..+|.+ ..|++...++|++++.+++ ++ .++....| ..+ +.+++. +- .+ ...
T Consensus 205 ~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~-~~----~vv~p~~p---------~~~----~~l~~~~~~-~~--~~~ 263 (385)
T 4hwg_A 205 YFLISSHREENVDVKNNLKELLNSLQMLIKEY-NF----LIIFSTHP---------RTK----KRLEDLEGF-KE--LGD 263 (385)
T ss_dssp EEEEEECCC-----CHHHHHHHHHHHHHHHHH-CC----EEEEEECH---------HHH----HHHHTSGGG-GG--TGG
T ss_pred EEEEEeCCchhcCcHHHHHHHHHHHHHHHhcC-Ce----EEEEECCh---------HHH----HHHHHHHHH-hc--CCC
Confidence 3566677754 3478899999999998766 44 23222211 222 233332 10 11 123
Q ss_pred cEEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee---eecCCceeeecCCC
Q psy9724 78 PIRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS---FSRSGNFRIKSAPS 127 (140)
Q Consensus 78 pv~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv---A~~~G~~~v~~~~g 127 (140)
.|. +.++++..++..+|+.||+++..| |-+.. ++ |+|+|.....
T Consensus 264 ~v~-l~~~lg~~~~~~l~~~adlvvt~S---Ggv~~EA~al--G~Pvv~~~~~ 310 (385)
T 4hwg_A 264 KIR-FLPAFSFTDYVKLQMNAFCILSDS---GTITEEASIL--NLPALNIREA 310 (385)
T ss_dssp GEE-ECCCCCHHHHHHHHHHCSEEEECC---TTHHHHHHHT--TCCEEECSSS
T ss_pred CEE-EEcCCCHHHHHHHHHhCcEEEECC---ccHHHHHHHc--CCCEEEcCCC
Confidence 454 577889999999999999999777 44332 67 9999987553
No 37
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=93.74 E-value=0.053 Score=38.29 Aligned_cols=42 Identities=12% Similarity=0.136 Sum_probs=32.3
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
.+.+.+++++++++ +.||+++. +.|.|.+ ++ |.|+|.....+
T Consensus 71 ~~~~~~~~~~~l~~-~~ad~~I~---~~G~~t~~Ea~~~--G~P~i~~p~~~ 116 (170)
T 2o6l_A 71 RLYKWIPQNDLLGH-PKTRAFIT---HGGANGIYEAIYH--GIPMVGIPLFA 116 (170)
T ss_dssp EEESSCCHHHHHTS-TTEEEEEE---CCCHHHHHHHHHH--TCCEEECCCST
T ss_pred EEecCCCHHHHhcC-CCcCEEEE---cCCccHHHHHHHc--CCCEEeccchh
Confidence 34678888877654 99999997 4577766 77 99999998753
No 38
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=93.36 E-value=0.25 Score=39.05 Aligned_cols=41 Identities=10% Similarity=0.087 Sum_probs=30.5
Q ss_pred EEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 79 IRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
|.+ .+.++ +..+|+.||+++..| |.|.+ || |.|+|....++
T Consensus 294 v~~-~~~~~---~~~~l~~ad~~v~~~---g~~t~~Ea~a~--G~P~v~~p~~~ 338 (412)
T 3otg_A 294 VRL-ESWVP---QAALLPHVDLVVHHG---GSGTTLGALGA--GVPQLSFPWAG 338 (412)
T ss_dssp EEE-ESCCC---HHHHGGGCSEEEESC---CHHHHHHHHHH--TCCEEECCCST
T ss_pred EEE-eCCCC---HHHHHhcCcEEEECC---chHHHHHHHHh--CCCEEecCCch
Confidence 443 56664 567899999999776 55654 78 99999987764
No 39
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=91.80 E-value=0.32 Score=38.30 Aligned_cols=87 Identities=11% Similarity=0.022 Sum_probs=53.0
Q ss_pred EEEEEecCcccc-------CCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCC
Q psy9724 2 SLVLSVDRLDYT-------KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTP 74 (140)
Q Consensus 2 ~iil~VdRld~~-------KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~ 74 (140)
.|+++.|++... +.+...++|+++. + +.++.++.+ .+ .+++.. +.
T Consensus 212 ~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~----~~~~~~~g~-----~~----~~~l~~----~~------ 263 (384)
T 2p6p_A 212 RVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----D----VELIVAAPD-----TV----AEALRA----EV------ 263 (384)
T ss_dssp EEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----T----CEEEEECCH-----HH----HHHHHH----HC------
T ss_pred EEEEECCCCCccccccccHHHHHHHHHHHhcC-----C----cEEEEEeCC-----CC----HHhhCC----CC------
Confidence 478999999875 5666677776542 2 234433321 11 122221 11
Q ss_pred CcccEEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 75 NWSPIRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 75 ~~~pv~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
..|.+ +.+++.+ +|+.||+++.. -|.|.+ +| |.|+|....++
T Consensus 264 --~~v~~--~~~~~~~---~l~~~d~~v~~---~G~~t~~Ea~~~--G~P~v~~p~~~ 309 (384)
T 2p6p_A 264 --PQARV--GWTPLDV---VAPTCDLLVHH---AGGVSTLTGLSA--GVPQLLIPKGS 309 (384)
T ss_dssp --TTSEE--ECCCHHH---HGGGCSEEEEC---SCTTHHHHHHHT--TCCEEECCCSH
T ss_pred --CceEE--cCCCHHH---HHhhCCEEEeC---CcHHHHHHHHHh--CCCEEEccCcc
Confidence 12433 5667654 57999999985 477776 66 99999987754
No 40
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=90.99 E-value=0.57 Score=41.46 Aligned_cols=94 Identities=17% Similarity=0.181 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHH
Q psy9724 14 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELAS 93 (140)
Q Consensus 14 KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~a 93 (140)
|=-+.-+..+.+.|++-|+- +|+.+..+.. .++.+.+.+.+. |- +-.-|+| .+..+.++..+
T Consensus 534 Ki~p~~~~~W~~IL~~vP~S----~L~Ll~~~~~--------~~~~l~~~~~~~----gi-~~~r~~f-~~~~~~~~~l~ 595 (723)
T 4gyw_A 534 KIDPSTLQMWANILKRVPNS----VLWLLRFPAV--------GEPNIQQYAQNM----GL-PQNRIIF-SPVAPKEEHVR 595 (723)
T ss_dssp GCCHHHHHHHHHHHHHCSSE----EEEEEETTGG--------GHHHHHHHHHHT----TC-CGGGEEE-EECCCHHHHHH
T ss_pred cCCHHHHHHHHHHHHhCCCC----eEEEEeCcHH--------HHHHHHHHHHhc----CC-CcCeEEE-CCCCCHHHHHH
Confidence 34467889999999999985 4655554421 123344444432 21 1123555 56779999999
Q ss_pred HHHHcCEEEECCCCCCCcee--eecCCceeeecC
Q psy9724 94 FYRDAAVALVTPLRDEWSNS--FSRSGNFRIKSA 125 (140)
Q Consensus 94 ly~~ADv~vvts~rdGmnLv--A~~~G~~~v~~~ 125 (140)
.|+.+||++.|.-+-|-+.. |---|.|||.=.
T Consensus 596 ~~~~~Di~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 596 RGQLADVCLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp HGGGCSEEECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred HhCCCeEEeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 99999999999999998776 333499998744
No 41
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=90.92 E-value=0.1 Score=41.94 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=31.0
Q ss_pred EEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 79 IRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
|. +.+.+++. .+|+.||+++.. .|.|.+ +| |.|+|....+|
T Consensus 285 v~-~~~~~~~~---~~l~~ad~~v~~---~G~~t~~Ea~~~--G~P~i~~p~~~ 329 (430)
T 2iyf_A 285 VE-VHDWVPQL---AILRQADLFVTH---AGAGGSQEGLAT--ATPMIAVPQAV 329 (430)
T ss_dssp EE-EESSCCHH---HHHTTCSEEEEC---CCHHHHHHHHHT--TCCEEECCCSH
T ss_pred eE-EEecCCHH---HHhhccCEEEEC---CCccHHHHHHHh--CCCEEECCCcc
Confidence 54 46677776 579999998875 477765 77 99999998765
No 42
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=89.20 E-value=0.073 Score=42.12 Aligned_cols=92 Identities=11% Similarity=0.072 Sum_probs=56.7
Q ss_pred EEEEEecCccccCCH-HHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEE
Q psy9724 2 SLVLSVDRLDYTKGL-VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIR 80 (140)
Q Consensus 2 ~iil~VdRld~~KGi-~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~ 80 (140)
.|+++.+++...|+. ...+.++.+. +++|++ .++..+.+. +...+ . .+ -..+.
T Consensus 220 ~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~----~~v~~~~~~-----~~~~l----~----~~--------~~~v~ 273 (391)
T 3tsa_A 220 RVCICMGRMVLNATGPAPLLRAVAAA-TELPGV----EAVIAVPPE-----HRALL----T----DL--------PDNAR 273 (391)
T ss_dssp EEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTE----EEEEECCGG-----GGGGC----T----TC--------CTTEE
T ss_pred EEEEEcCCCCCcccchHHHHHHHHHh-ccCCCe----EEEEEECCc-----chhhc----c----cC--------CCCEE
Confidence 467778888776555 7778888777 778764 355444331 11011 1 00 01243
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
+.+.++..++ ++.||+++.. -|.|.+ +| |+|+|....++
T Consensus 274 -~~~~~~~~~l---l~~ad~~v~~---~G~~t~~Ea~~~--G~P~v~~p~~~ 316 (391)
T 3tsa_A 274 -IAESVPLNLF---LRTCELVICA---GGSGTAFTATRL--GIPQLVLPQYF 316 (391)
T ss_dssp -ECCSCCGGGT---GGGCSEEEEC---CCHHHHHHHHHT--TCCEEECCCST
T ss_pred -EeccCCHHHH---HhhCCEEEeC---CCHHHHHHHHHh--CCCEEecCCcc
Confidence 3566776654 5999999964 466665 66 99999975543
No 43
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=86.10 E-value=1.5 Score=34.99 Aligned_cols=32 Identities=13% Similarity=0.051 Sum_probs=24.4
Q ss_pred HHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecC
Q psy9724 89 DELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSA 125 (140)
Q Consensus 89 ~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~ 125 (140)
+++..+|+.||+++.. -|.|.+ |+ |.|+|...
T Consensus 244 ~dm~~~l~~aDlvI~r---aG~~Tv~E~~a~--G~P~Ilip 279 (365)
T 3s2u_A 244 SDMAAAYAWADLVICR---AGALTVSELTAA--GLPAFLVP 279 (365)
T ss_dssp SCHHHHHHHCSEEEEC---CCHHHHHHHHHH--TCCEEECC
T ss_pred hhhhhhhccceEEEec---CCcchHHHHHHh--CCCeEEec
Confidence 3577899999999864 476665 77 99988654
No 44
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=81.62 E-value=2.4 Score=32.82 Aligned_cols=45 Identities=7% Similarity=-0.088 Sum_probs=33.7
Q ss_pred cEEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-eecCCceeeecC
Q psy9724 78 PIRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS-FSRSGNFRIKSA 125 (140)
Q Consensus 78 pv~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-A~~~G~~~v~~~ 125 (140)
++..+.+..+..|+.++++.||+++.+. .-+|.|- |. |+|+|+=.
T Consensus 242 ~~~~l~g~~sl~e~~ali~~a~l~I~~D-sg~~HlAaa~--g~P~v~lf 287 (348)
T 1psw_A 242 WCRNLAGETQLDQAVILIAACKAIVTND-SGLMHVAAAL--NRPLVALY 287 (348)
T ss_dssp TEEECTTTSCHHHHHHHHHTSSEEEEES-SHHHHHHHHT--TCCEEEEE
T ss_pred ceEeccCcCCHHHHHHHHHhCCEEEecC-CHHHHHHHHc--CCCEEEEE
Confidence 3555578899999999999999999875 2334443 55 99988743
No 45
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=79.38 E-value=11 Score=24.76 Aligned_cols=100 Identities=14% Similarity=0.140 Sum_probs=49.9
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCCh-------hHHHHHH-HHHHHHHHHHhcCC
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKH-PEHLEKVTLLQIAVPSRTDV-------KEYQDLK-EEMDQLVGRINGRF 71 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~-P~~~~kv~Lvqi~~psr~~~-------~~y~~~~-~~l~~lv~~IN~~~ 71 (140)
|+|++.+|-=+. -..|++..++.- -....++.++.+..+..... +..++++ ++.++..+++-..+
T Consensus 2 ~~ILv~~D~s~~------s~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 75 (138)
T 3idf_A 2 KKLLFAIDDTEA------CERAAQYILDMFGKDADCTLTLIHVKPEFMLYGEAVLAAYDEIEMKEEEKAKLLTQKFSTFF 75 (138)
T ss_dssp EEEEEECCSSHH------HHHHHHHHHHHHTTCTTEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCHH------HHHHHHHHHHHhccCCCCEEEEEEEecCCCcccccccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888875332 233444333322 22334777887776544321 1111222 22223333332222
Q ss_pred CCCCccc-EEEEeCCCCHHHHHHHHHHcCEEEECCCC
Q psy9724 72 TTPNWSP-IRYIYGCISQDELASFYRDAAVALVTPLR 107 (140)
Q Consensus 72 g~~~~~p-v~~~~~~~~~~el~aly~~ADv~vvts~r 107 (140)
...+... .....+ -+.+++..+-+.+|.+++-+..
T Consensus 76 ~~~g~~~~~~v~~g-~~~~~I~~~a~~~dliV~G~~~ 111 (138)
T 3idf_A 76 TEKGINPFVVIKEG-EPVEMVLEEAKDYNLLIIGSSE 111 (138)
T ss_dssp HTTTCCCEEEEEES-CHHHHHHHHHTTCSEEEEECCT
T ss_pred HHCCCCeEEEEecC-ChHHHHHHHHhcCCEEEEeCCC
Confidence 2222222 223345 4778888888899999987763
No 46
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=77.81 E-value=13 Score=24.63 Aligned_cols=99 Identities=11% Similarity=0.137 Sum_probs=47.6
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCh--------hHHHHHHHHHHHHHHHHhcCCC
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDV--------KEYQDLKEEMDQLVGRINGRFT 72 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~--------~~y~~~~~~l~~lv~~IN~~~g 72 (140)
|+|++.+|-=+... ..++--..+.+. +..++.++.+..+..... ...+..+++.++..+++-..+.
T Consensus 6 ~~ILv~~D~s~~s~---~al~~A~~la~~---~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 79 (146)
T 3s3t_A 6 TNILVPVDSSDAAQ---AAFTEAVNIAQR---HQANLTALYVVDDSAYHTPALDPVLSELLDAEAAHAKDAMRQRQQFVA 79 (146)
T ss_dssp CEEEEECCSSHHHH---HHHHHHHHHHHH---HTCEEEEEEEEECCCCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEcCCCHHHH---HHHHHHHHHHHh---cCCEEEEEEEecCccccccccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68899988544432 222222223322 234677777765433211 1112233333333333333333
Q ss_pred CCCc---ccEEEEeCCCCHHHHHH-HH--HHcCEEEECCCC
Q psy9724 73 TPNW---SPIRYIYGCISQDELAS-FY--RDAAVALVTPLR 107 (140)
Q Consensus 73 ~~~~---~pv~~~~~~~~~~el~a-ly--~~ADv~vvts~r 107 (140)
..+. ... ...+ -+.+++.. +- ..+|.+++.+..
T Consensus 80 ~~g~~~~~~~-~~~g-~~~~~I~~~~a~~~~~dliV~G~~~ 118 (146)
T 3s3t_A 80 TTSAPNLKTE-ISYG-IPKHTIEDYAKQHPEIDLIVLGATG 118 (146)
T ss_dssp TSSCCCCEEE-EEEE-CHHHHHHHHHHHSTTCCEEEEESCC
T ss_pred hcCCcceEEE-EecC-ChHHHHHHHHHhhcCCCEEEECCCC
Confidence 2233 222 2344 36677776 44 589999998764
No 47
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=77.74 E-value=1.7 Score=35.12 Aligned_cols=42 Identities=7% Similarity=-0.031 Sum_probs=31.0
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee--eecCCceeeecCCCC
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS--FSRSGNFRIKSAPSG 128 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv--A~~~G~~~v~~~~gg 128 (140)
.+.+.+++.+ +|..||+++. +.|.|.+ |+.-|.|+|....++
T Consensus 322 ~~~~~~~~~~---ll~~ad~~V~---~~G~~t~~Ea~~~G~P~i~~p~~~ 365 (441)
T 2yjn_A 322 RTVGFVPMHA---LLPTCAATVH---HGGPGSWHTAAIHGVPQVILPDGW 365 (441)
T ss_dssp EECCSCCHHH---HGGGCSEEEE---CCCHHHHHHHHHTTCCEEECCCSH
T ss_pred EEecCCCHHH---HHhhCCEEEE---CCCHHHHHHHHHhCCCEEEeCCcc
Confidence 3467788754 4799999997 5788776 333399999987754
No 48
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=77.05 E-value=0.42 Score=37.90 Aligned_cols=39 Identities=8% Similarity=0.055 Sum_probs=27.7
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
+.+.++.. .++..||+++. ..|.|.+ +| |.|+|....++
T Consensus 288 ~~~~~~~~---~ll~~ad~~v~---~gG~~t~~Ea~~~--G~P~v~~p~~~ 330 (398)
T 4fzr_A 288 AAGQFPLS---AIMPACDVVVH---HGGHGTTLTCLSE--GVPQVSVPVIA 330 (398)
T ss_dssp EESCCCHH---HHGGGCSEEEE---CCCHHHHHHHHHT--TCCEEECCCSG
T ss_pred EeCcCCHH---HHHhhCCEEEe---cCCHHHHHHHHHh--CCCEEecCCch
Confidence 45667755 56677999995 4566765 67 99999976643
No 49
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=74.84 E-value=15 Score=24.10 Aligned_cols=102 Identities=14% Similarity=0.275 Sum_probs=58.7
Q ss_pred CEEEEEecCccc--cCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC----------hhHHHHHHHHHHHHHHHHh
Q psy9724 1 MSLVLSVDRLDY--TKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD----------VKEYQDLKEEMDQLVGRIN 68 (140)
Q Consensus 1 k~iil~VdRld~--~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~----------~~~y~~~~~~l~~lv~~IN 68 (140)
|+|++.+|-=+. ..........+.+.. ..++.++.+..+.... .+..++..++..+...++-
T Consensus 2 k~ILv~vD~s~~~~s~~al~~a~~la~~~------~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 75 (143)
T 3fdx_A 2 NAILVPIDISDKEFTERIISHVESEARID------DAEVHFLTVIPSLPYYASLGMAYTAELPGMDELREGSETQLKEIA 75 (143)
T ss_dssp CEEEEECCTTCSSCCTTHHHHHHHHHHHH------TCEEEEEEEECC----------------CHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCChHhhHHHHHHHHHHHHHhc------CCeEEEEEEecCCcccccccccccchhhhHHHHHHHHHHHHHHHH
Confidence 689999998777 666655544444332 1356777776542210 0112344455555556666
Q ss_pred cCCCCCCcccEE--EEeCCCCHHHHHHHHH--HcCEEEECCCCCCC
Q psy9724 69 GRFTTPNWSPIR--YIYGCISQDELASFYR--DAAVALVTPLRDEW 110 (140)
Q Consensus 69 ~~~g~~~~~pv~--~~~~~~~~~el~aly~--~ADv~vvts~rdGm 110 (140)
.++|..+ ..+. ...+ -+.+++..+-+ .+|..++-+.+.|+
T Consensus 76 ~~~~~~~-~~v~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~~~~ 119 (143)
T 3fdx_A 76 KKFSIPE-DRMHFHVAEG-SPKDKILALAKSLPADLVIIASHRPDI 119 (143)
T ss_dssp TTSCCCG-GGEEEEEEES-CHHHHHHHHHHHTTCSEEEEESSCTTC
T ss_pred HHcCCCC-CceEEEEEec-ChHHHHHHHHHHhCCCEEEEeCCCCCC
Confidence 6666432 2222 3344 46777887766 69999999886554
No 50
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=72.26 E-value=2.4 Score=33.27 Aligned_cols=31 Identities=6% Similarity=0.043 Sum_probs=22.6
Q ss_pred HHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecC
Q psy9724 89 DELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSA 125 (140)
Q Consensus 89 ~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~ 125 (140)
+++..+|+.||+++. +-| +.+ ++ |.|.|.=.
T Consensus 217 ~~m~~~m~~aDlvI~---~gG-~T~~E~~~~--g~P~i~ip 251 (282)
T 3hbm_A 217 ENIAKLMNESNKLII---SAS-SLVNEALLL--KANFKAIC 251 (282)
T ss_dssp SCHHHHHHTEEEEEE---ESS-HHHHHHHHT--TCCEEEEC
T ss_pred HHHHHHHHHCCEEEE---CCc-HHHHHHHHc--CCCEEEEe
Confidence 457789999999988 357 343 56 99987643
No 51
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=72.25 E-value=5.5 Score=29.20 Aligned_cols=47 Identities=19% Similarity=0.393 Sum_probs=33.9
Q ss_pred HHHHHHHHhCCCCCCCeEEE--------EEecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 21 KAFETLLEKHPEHLEKVTLL--------QIAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 21 ~A~~~~L~~~P~~~~kv~Lv--------qi~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
...+.+...+|+..+|+.++ -|-.|.....+.|++..++|++.+..+
T Consensus 122 ~~~~~l~~~~p~~~~kv~~l~~~~~~~~dI~DPy~~~~e~f~~v~~~I~~~i~~l 176 (180)
T 4egs_A 122 SHKRSLVSQYPEYADKIFTIKEFVGLEGDVEDPYGMPLEVYKKTAEELSGLIDKL 176 (180)
T ss_dssp HHHHHHHHHSTTSGGGEEETTTTTTCCSCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccccceeehhhccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 45667788899998888764 244566566677888888888877764
No 52
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=70.53 E-value=2.6 Score=33.23 Aligned_cols=39 Identities=10% Similarity=0.114 Sum_probs=27.4
Q ss_pred EEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCC
Q psy9724 79 IRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAP 126 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~ 126 (140)
|. +.+.++.++ +++.||+++. .-|.|.+ ++ |.|+|....
T Consensus 285 v~-~~~~~~~~~---ll~~ad~~v~---~~G~~t~~Eal~~--G~P~v~~p~ 327 (398)
T 3oti_A 285 VR-AVGWTPLHT---LLRTCTAVVH---HGGGGTVMTAIDA--GIPQLLAPD 327 (398)
T ss_dssp EE-EESSCCHHH---HHTTCSEEEE---CCCHHHHHHHHHH--TCCEEECCC
T ss_pred EE-EEccCCHHH---HHhhCCEEEE---CCCHHHHHHHHHh--CCCEEEcCC
Confidence 44 356777665 5677999985 4567766 66 999999544
No 53
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=63.15 E-value=12 Score=29.35 Aligned_cols=41 Identities=7% Similarity=-0.029 Sum_probs=28.4
Q ss_pred EEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee--eecCCceeeecCC
Q psy9724 79 IRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS--FSRSGNFRIKSAP 126 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv--A~~~G~~~v~~~~ 126 (140)
+.+ .+.+++. .+++.||+++..+ |.|.+ |+.-|.|+|.-..
T Consensus 299 v~~-~~~~~~~---~ll~~ad~~v~~~---G~~t~~Ea~~~G~P~v~~p~ 341 (415)
T 3rsc_A 299 VEA-HRWVPHV---KVLEQATVCVTHG---GMGTLMEALYWGRPLVVVPQ 341 (415)
T ss_dssp EEE-ESCCCHH---HHHHHEEEEEESC---CHHHHHHHHHTTCCEEECCC
T ss_pred EEE-EecCCHH---HHHhhCCEEEECC---cHHHHHHHHHhCCCEEEeCC
Confidence 433 5677766 6788899988764 77765 3333999998544
No 54
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=62.62 E-value=28 Score=22.77 Aligned_cols=25 Identities=12% Similarity=0.226 Sum_probs=18.5
Q ss_pred EeCCCCHHHHHHHHH--HcCEEEECCCC
Q psy9724 82 IYGCISQDELASFYR--DAAVALVTPLR 107 (140)
Q Consensus 82 ~~~~~~~~el~aly~--~ADv~vvts~r 107 (140)
..+ -+.+++..+-+ .+|.+++.+..
T Consensus 94 ~~g-~~~~~I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 94 KGG-RPSRTIVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp EES-CHHHHHHHHHHHTTCSEEEECSSC
T ss_pred ecC-CHHHHHHHHHHHhCCCEEEEeCCC
Confidence 344 46777888777 79999998764
No 55
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=55.94 E-value=14 Score=26.34 Aligned_cols=46 Identities=20% Similarity=0.424 Sum_probs=32.0
Q ss_pred HHHHHHHhCCCCCCCeEEE-------EEecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 22 AFETLLEKHPEHLEKVTLL-------QIAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 22 A~~~~L~~~P~~~~kv~Lv-------qi~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
..+.+.+..|.+.+|+.++ -|..|...+.+.|++..++|++.+..+
T Consensus 94 ~~~~l~~~~p~~~~kv~~l~~~~~~~~i~DP~~~~~~~f~~~~~~I~~~v~~l 146 (161)
T 2cwd_A 94 NLEEVLRRFPEARGKVRLVLEELGGGEVQDPYYGDLEDFREVYWTLEAALQAF 146 (161)
T ss_dssp HHHHHHHHCGGGTTTEEEGGGGGTCCCCCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCccCcEEeehhhcCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4456677789888888776 566787776667776666666665554
No 56
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=55.35 E-value=12 Score=27.48 Aligned_cols=47 Identities=15% Similarity=0.314 Sum_probs=31.6
Q ss_pred HHHHHHHHhCCCCCCCeEEE---------EEecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 21 KAFETLLEKHPEHLEKVTLL---------QIAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 21 ~A~~~~L~~~P~~~~kv~Lv---------qi~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
...+.+.+.+|++.+|+.++ -|..|.....+.|+...++|++.+..+
T Consensus 120 ~~~~~l~~~~P~~~~Kv~lL~~~~~~~~~dVpDPy~g~~~~F~~v~d~I~~~i~~l 175 (184)
T 4etn_A 120 QHKQIIASQFGRYRDKVFTLKEYVTGSHGDVLDPFGGSIDIYKQTRDELEELLRQL 175 (184)
T ss_dssp HHHHHHHHHCGGGGGGEEEHHHHHHSSCCCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCccceEEEhhhhccCCCCccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 34566677788887787654 355677776677777767666666554
No 57
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=53.82 E-value=28 Score=26.79 Aligned_cols=39 Identities=13% Similarity=-0.063 Sum_probs=27.2
Q ss_pred EeCCCCHHHHHHHHHHcCEEEECCCCCCCcee--eecCCceeeecCC
Q psy9724 82 IYGCISQDELASFYRDAAVALVTPLRDEWSNS--FSRSGNFRIKSAP 126 (140)
Q Consensus 82 ~~~~~~~~el~aly~~ADv~vvts~rdGmnLv--A~~~G~~~v~~~~ 126 (140)
+.+.++.. .+++.||+++..+ |.|.+ |+.-|.|+|.-..
T Consensus 285 ~~~~~~~~---~ll~~ad~~v~~~---G~~t~~Ea~~~G~P~v~~p~ 325 (402)
T 3ia7_A 285 AHQWIPFH---SVLAHARACLTHG---TTGAVLEAFAAGVPLVLVPH 325 (402)
T ss_dssp EESCCCHH---HHHTTEEEEEECC---CHHHHHHHHHTTCCEEECGG
T ss_pred EecCCCHH---HHHhhCCEEEECC---CHHHHHHHHHhCCCEEEeCC
Confidence 35677776 7888999988765 66665 3333999996543
No 58
>2wja_A Putative acid phosphatase WZB; hydrolase; 2.50A {Escherichia coli}
Probab=53.35 E-value=18 Score=26.15 Aligned_cols=48 Identities=21% Similarity=0.297 Sum_probs=35.1
Q ss_pred HHHHHHHhCCCCCCCeEEE-------EEecCCCCChhHHHHHHHHHHHHHHHHhc
Q psy9724 22 AFETLLEKHPEHLEKVTLL-------QIAVPSRTDVKEYQDLKEEMDQLVGRING 69 (140)
Q Consensus 22 A~~~~L~~~P~~~~kv~Lv-------qi~~psr~~~~~y~~~~~~l~~lv~~IN~ 69 (140)
..+.+....|...+|+.++ .|..|.....+.|++..++|++.+..+-.
T Consensus 110 ~~~~l~~~~p~~~~kv~~l~~w~~~~~I~DP~~~~~~~f~~v~~~I~~~v~~ll~ 164 (168)
T 2wja_A 110 HLEQISRIAPEARGKTMLFGHWLDSKEIPDPYRMSDEAFDSVYQLLEQASKRWAE 164 (168)
T ss_dssp HHHHHHHHCTTTGGGEEETTCC---CCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcccceEEeeHhhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4556677789887787665 56678777777888888888877776533
No 59
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=51.86 E-value=7.6 Score=28.98 Aligned_cols=66 Identities=12% Similarity=0.019 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee--------------eecCCce
Q psy9724 55 DLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS--------------FSRSGNF 120 (140)
Q Consensus 55 ~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv--------------A~~~G~~ 120 (140)
++.+.+.+..+++ |+..........+.++..+..+.||.++++- -+-+.++ +.++|.|
T Consensus 44 ~~~~s~~~a~~~l-------G~~v~~~~i~~~~~~~~~~~l~~ad~I~l~G-G~~~~l~~~L~~~gl~~~l~~~~~~G~p 115 (206)
T 3l4e_A 44 FYVEAGKKALESL-------GLLVEELDIATESLGEITTKLRKNDFIYVTG-GNTFFLLQELKRTGADKLILEEIAAGKL 115 (206)
T ss_dssp HHHHHHHHHHHHT-------TCEEEECCTTTSCHHHHHHHHHHSSEEEECC-SCHHHHHHHHHHHTHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHc-------CCeEEEEEecCCChHHHHHHHHhCCEEEECC-CCHHHHHHHHHHCChHHHHHHHHHcCCe
Confidence 3455556666664 3333322112246777778899999999987 5555553 4456889
Q ss_pred eeecCCCC
Q psy9724 121 RIKSAPSG 128 (140)
Q Consensus 121 ~v~~~~gg 128 (140)
.+++-+|-
T Consensus 116 ~~G~sAGa 123 (206)
T 3l4e_A 116 YIGESAGA 123 (206)
T ss_dssp EEEETHHH
T ss_pred EEEECHHH
Confidence 88876664
No 60
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=50.64 E-value=14 Score=25.91 Aligned_cols=46 Identities=22% Similarity=0.317 Sum_probs=33.4
Q ss_pred HHHHHHHhCCCCCCCeEEE-------EEecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 22 AFETLLEKHPEHLEKVTLL-------QIAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 22 A~~~~L~~~P~~~~kv~Lv-------qi~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
+.+.+....|...+|+.++ .|-.|.....+.|+...++|++.+..+
T Consensus 92 ~~~~l~~~~p~~~~kv~~l~~~~~~~~i~DP~~~~~~~f~~~~~~i~~~i~~l 144 (150)
T 2wmy_A 92 HLEQISRIAPEARGKTMLFGHWLDSKEIPDPYRMSDEAFDSVYQLLEQASKRW 144 (150)
T ss_dssp HHHHHHHHCGGGGGGEEETTTTSSSCCCCCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCccceEeehHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 4455677788877787665 667788777778888777777777665
No 61
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=50.64 E-value=77 Score=23.77 Aligned_cols=100 Identities=8% Similarity=0.007 Sum_probs=51.7
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC------ChhH-HHHHHHHHHHHHHHHhcCCCC
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT------DVKE-YQDLKEEMDQLVGRINGRFTT 73 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~------~~~~-y~~~~~~l~~lv~~IN~~~g~ 73 (140)
++|++.+|--+.. ...++....+.+. +..++.++.+..+... +..+ .++.++.+++..+++..+|..
T Consensus 172 ~~Ilv~~D~s~~s---~~al~~a~~la~~---~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 245 (309)
T 3cis_A 172 APVLVGVDGSSAS---ELATAIAFDEASR---RNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPN 245 (309)
T ss_dssp CCEEEECCSSHHH---HHHHHHHHHHHHH---TTCCEEEEEESCSSCCTTCSSCCHHHHHHHHHHHHHHHHTTHHHHCTT
T ss_pred CeEEEEeCCChHH---HHHHHHHHHHHHh---cCCEEEEEEEeecccccCCCcccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 4678888754332 2222222233332 2346778877654321 1111 123344455555555544433
Q ss_pred CCcccEEEEeCCCCHHHHHHHHHHcCEEEECCCCC
Q psy9724 74 PNWSPIRYIYGCISQDELASFYRDAAVALVTPLRD 108 (140)
Q Consensus 74 ~~~~pv~~~~~~~~~~el~aly~~ADv~vvts~rd 108 (140)
..... ....+ -+.+++..+-+.||.+++-+...
T Consensus 246 ~~~~~-~~~~g-~~~~~I~~~a~~adliV~G~~~~ 278 (309)
T 3cis_A 246 VAITR-VVVRD-QPARQLVQRSEEAQLVVVGSRGR 278 (309)
T ss_dssp SCEEE-EEESS-CHHHHHHHHHTTCSEEEEESSCS
T ss_pred CcEEE-EEEcC-CHHHHHHHhhCCCCEEEECCCCC
Confidence 32222 23344 46777888888899999987743
No 62
>3u02_A Putative transcription-associated protein TFIIS; structural genomics, PSI-biology; HET: TPO MSE CIT MES; 2.40A {Pyrococcus furiosus dsm 3638}
Probab=50.30 E-value=87 Score=24.31 Aligned_cols=97 Identities=21% Similarity=0.282 Sum_probs=50.7
Q ss_pred CEEEEEecCccccCC--HHHHHHHHHHHHHhCCCCCCCeEEEEEec--CCCC--C----------hhHHHHHHHHHHHHH
Q psy9724 1 MSLVLSVDRLDYTKG--LVHRLKAFETLLEKHPEHLEKVTLLQIAV--PSRT--D----------VKEYQDLKEEMDQLV 64 (140)
Q Consensus 1 k~iil~VdRld~~KG--i~~kl~A~~~~L~~~P~~~~kv~Lvqi~~--psr~--~----------~~~y~~~~~~l~~lv 64 (140)
+.+++|+|-.|-..| .-..-..+.+.|++.-.+.+.-.|+|+-. |..+ . ..+..++.+.+.+++
T Consensus 1 m~~~IGIDDTDs~~ggcTt~la~~i~~~L~~~g~~v~~h~LvrLnP~iP~KTrgN~a~~l~~~v~~~~~~~l~~~a~~~v 80 (252)
T 3u02_A 1 MLIHIGIDDTDSPNGMCTTYIGAILYREISKIAEPLDFPRLIRLNPNVPYKTRGNGAVAMSFKIDEEKIKEVKTLVIRYV 80 (252)
T ss_dssp CEEEEEEECCSSSSCCCHHHHHHHHHHHHTTTSEESSSCEEEESCTTC-----CCEEEEEEEECCGGGHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCCCCCCHHHHHHHHHHHHHhcCCccCceeEEEeCCCCCccCCCCcEEEEEEEcCCCCHHHHHHHHHHHH
Confidence 357899999998887 34444444455554322334455666532 3322 1 133456666677777
Q ss_pred HHHhcCCCCCCccc-EEEEeCCCCHHHHHHHHHHcC
Q psy9724 65 GRINGRFTTPNWSP-IRYIYGCISQDELASFYRDAA 99 (140)
Q Consensus 65 ~~IN~~~g~~~~~p-v~~~~~~~~~~el~aly~~AD 99 (140)
++. ++++..+-.| +.+..+. ..+++..|++.|=
T Consensus 81 ~~~-s~~~~~~t~PGi~v~~~~-~~~~L~~f~~~A~ 114 (252)
T 3u02_A 81 REL-ADIDHENTNPGIVFLIGE-VPKELEEFSLRAL 114 (252)
T ss_dssp HHH-HTCC-----CCEEEEESS-BCHHHHHHHHHHH
T ss_pred HHH-hcccCCCCCCEEEEEeCC-CCHHHHHHHHHHH
Confidence 665 4454433344 5555555 3466777776653
No 63
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=50.05 E-value=56 Score=22.04 Aligned_cols=98 Identities=11% Similarity=0.202 Sum_probs=51.3
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC----------------ChhH-----HHHHHHH
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT----------------DVKE-----YQDLKEE 59 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~----------------~~~~-----y~~~~~~ 59 (140)
|+|++.+|-=+. -..|++...+--.....++.++.+..+... +..+ .+..++.
T Consensus 6 ~~ILv~vD~s~~------s~~al~~A~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (170)
T 2dum_A 6 RKVLFPTDFSEG------AYRAVEVFEKRNKMEVGEVILLHVIDEGTLEELMDGYSFFYDNAEIELKDIKEKLKEEASRK 79 (170)
T ss_dssp SEEEEECCSSHH------HHHHHHHHHHHCCSCCSEEEEEEEEETTGGGCCC------------CCTTSHHHHHHHHHHH
T ss_pred ceEEEEecCCHH------HHHHHHHHHHHHHhcCCEEEEEEEecCccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 578888886433 334555555444444557888876543211 0001 1123334
Q ss_pred HHHHHHHHhcCCCCCCccc-EEEEeCCCCHHHHHHHHH--HcCEEEECCCC
Q psy9724 60 MDQLVGRINGRFTTPNWSP-IRYIYGCISQDELASFYR--DAAVALVTPLR 107 (140)
Q Consensus 60 l~~lv~~IN~~~g~~~~~p-v~~~~~~~~~~el~aly~--~ADv~vvts~r 107 (140)
++++.+.+... | ..+.. +....+ -+.+++..+-+ .+|.+++.+..
T Consensus 80 l~~~~~~~~~~-g-~~~~~~~~~~~g-~~~~~I~~~a~~~~~DlIV~G~~g 127 (170)
T 2dum_A 80 LQEKAEEVKRA-F-RAKNVRTIIRFG-IPWDEIVKVAEEENVSLIILPSRG 127 (170)
T ss_dssp HHHHHHHHHHH-T-TCSEEEEEEEEE-CHHHHHHHHHHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHc-C-CceeeeeEEecC-ChHHHHHHHHHHcCCCEEEECCCC
Confidence 44444444321 2 11222 122344 36777888777 89999998874
No 64
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=47.78 E-value=17 Score=26.30 Aligned_cols=46 Identities=24% Similarity=0.325 Sum_probs=31.6
Q ss_pred HHHHHHHhCCCCCCCeEEE-------EEecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 22 AFETLLEKHPEHLEKVTLL-------QIAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 22 A~~~~L~~~P~~~~kv~Lv-------qi~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
..+.+....|...+|+.++ .|..|.....++|++..++|++.+..+
T Consensus 106 ~~~~l~~~~p~~~~kv~~l~~w~~~~~I~DP~~~~~~~f~~v~~~I~~~v~~l 158 (167)
T 2fek_A 106 HIERLCEMAPEMRGKVMLFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQW 158 (167)
T ss_dssp HHHHHHHHCGGGGGGEEEGGGGTTTCCCCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcccceEEehHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3455677788877787666 677788777777777666666665554
No 65
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=47.43 E-value=58 Score=25.51 Aligned_cols=44 Identities=9% Similarity=-0.050 Sum_probs=30.8
Q ss_pred EEEEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee-eecCCceeeecC
Q psy9724 79 IRYIYGCISQDELASFYRDAAVALVTPLRDEWSNS-FSRSGNFRIKSA 125 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv-A~~~G~~~v~~~ 125 (140)
+.-+.+..+..|+.++++.||+++.+- --.|-|- |. |+|+|+=.
T Consensus 243 ~~~l~g~~sl~e~~ali~~a~~~i~~D-sG~~HlAaa~--g~P~v~lf 287 (349)
T 3tov_A 243 PIVATGKFQLGPLAAAMNRCNLLITND-SGPMHVGISQ--GVPIVALY 287 (349)
T ss_dssp CEECTTCCCHHHHHHHHHTCSEEEEES-SHHHHHHHTT--TCCEEEEC
T ss_pred cEEeeCCCCHHHHHHHHHhCCEEEECC-CCHHHHHHhc--CCCEEEEE
Confidence 344567899999999999999988751 1223332 45 88888754
No 66
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=44.79 E-value=67 Score=21.39 Aligned_cols=97 Identities=13% Similarity=0.195 Sum_probs=51.0
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----C--C----C--h-h-------HH-H----
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPS-----R--T----D--V-K-------EY-Q---- 54 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~ps-----r--~----~--~-~-------~y-~---- 54 (140)
|+|++.+|-=+ .-..|++...+.-.....++.++.+..+. . . . . . ++ +
T Consensus 6 ~~ILv~vD~s~------~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (162)
T 1mjh_A 6 KKILYPTDFSE------TAEIALKHVKAFKTLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTE 79 (162)
T ss_dssp CEEEEECCSCH------HHHHHHHHHHHTCCSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCH------HHHHHHHHHHHHHhhcCCeEEEEEEecCccccccccccccccccccccchhhhHHHHHHHHHH
Confidence 57888888533 34456766666555555678888776542 1 0 0 1 1 11 1
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHH--HcCEEEECCCC
Q psy9724 55 DLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR--DAAVALVTPLR 107 (140)
Q Consensus 55 ~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~--~ADv~vvts~r 107 (140)
..++.++++.+.+.. .| ..+.. ....+ -+.+++..+-+ .+|.+++.+..
T Consensus 80 ~~~~~l~~~~~~~~~-~g-~~~~~-~v~~G-~~~~~I~~~a~~~~~dlIV~G~~g 130 (162)
T 1mjh_A 80 EAKNKMENIKKELED-VG-FKVKD-IIVVG-IPHEEIVKIAEDEGVDIIIMGSHG 130 (162)
T ss_dssp HHHHHHHHHHHHHHH-TT-CEEEE-EEEEE-CHHHHHHHHHHHTTCSEEEEESCC
T ss_pred HHHHHHHHHHHHHHH-cC-CceEE-EEcCC-CHHHHHHHHHHHcCCCEEEEcCCC
Confidence 122333444443322 12 11122 23344 46777877777 79999998874
No 67
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=43.99 E-value=39 Score=26.96 Aligned_cols=69 Identities=20% Similarity=0.211 Sum_probs=40.8
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ 97 (140)
++.+++.-|++.+ ++...|+.. +|. +.. .+...+++++|+..|...++.-++..+|.-+.+|-.+++..
T Consensus 36 ~~~ll~~~p~l~~~~~i~~~~~~~idS~-~mt-----~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~ 107 (327)
T 1o7j_A 36 VDTLINAVPEVKKLANVKGEQFSNMASE-NMT-----GDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAYFLHL 107 (327)
T ss_dssp HHHHHHHCGGGGGTCEEEEEEEEEECGG-GCC-----HHHHHHHHHHHHHHHTSTTCCEEEEECCSTTHHHHHHHHHH
T ss_pred HHHHHHhCccccccceEEEEEeccCCcc-cCC-----HHHHHHHHHHHHHHhccCCCCEEEEecCchhHHHHHHHHHH
Confidence 4455666666644 466677764 332 111 12334566666666654445667777888888887776654
No 68
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens} SCOP: c.124.1.0
Probab=43.36 E-value=18 Score=27.91 Aligned_cols=70 Identities=9% Similarity=0.098 Sum_probs=40.4
Q ss_pred CCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEE--------EeCCCCHHHHHHHHHHcCEEEEC
Q psy9724 34 LEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRY--------IYGCISQDELASFYRDAAVALVT 104 (140)
Q Consensus 34 ~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~--------~~~~~~~~el~aly~~ADv~vvt 104 (140)
..++.+||+-+........+.....-+.++++++|.++-.. ..|... +...-..++...+++.+|+.++.
T Consensus 80 ~~~~~vV~l~Gg~~~~~~~~~~~n~i~~~lA~~~~~~~~~l-~~P~~~~s~~~~~~l~~~~~i~~~l~~~~~~Diai~G 157 (267)
T 3nze_A 80 THDSIVVQLNGAGNMQTTGITYASDIMRRFGSAYGARVEQF-PVPAFFDHASTKTAMWNERSVQRILDLQARMSIAIFG 157 (267)
T ss_dssp CSSCEEEECSCCCCTTSCSHHHHHHHHHHHHHHHTCEEECC-CSCSSCSSHHHHHHHTTCHHHHHHHHHHHTCSEEEEC
T ss_pred CCCCEEEECCCCCCCCccccccHHHHHHHHHHHhCCeEEEe-eCCEEcCCHHHHHHHHhChHHHHHHHHHhcCCEEEEe
Confidence 34788899855332211211112245677888888776543 233322 12233456777899999999983
No 69
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=43.13 E-value=17 Score=25.33 Aligned_cols=45 Identities=11% Similarity=0.234 Sum_probs=31.0
Q ss_pred HHHHHHHhCCCC-CCCeEEE----EEecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 22 AFETLLEKHPEH-LEKVTLL----QIAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 22 A~~~~L~~~P~~-~~kv~Lv----qi~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
..+.+.+..|.+ .+++.++ .|-.|...+ +.|++..++|++.+..+
T Consensus 90 ~~~~l~~~~p~~~~~kv~~l~~~~~i~DP~~~~-~~f~~~~~~I~~~v~~l 139 (146)
T 1p8a_A 90 ILSDINSMKPSNCRAKVVLFNPPNGVDDPYYSS-DGFPTMFASISKEMKPF 139 (146)
T ss_dssp HHHHHHHHCCSSCSCEEEECSCTTSSCCCSSSS-SSHHHHHHHHHHTTHHH
T ss_pred HHHHHHHHCCcccCCeEEEeCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHH
Confidence 455667789995 8888776 567787765 66777766666655543
No 70
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=42.91 E-value=75 Score=21.43 Aligned_cols=99 Identities=16% Similarity=0.146 Sum_probs=50.2
Q ss_pred CEEEEEecC-ccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC-hhHHHHHHHHHHHHHHHHhcCCCCCCccc
Q psy9724 1 MSLVLSVDR-LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTD-VKEYQDLKEEMDQLVGRINGRFTTPNWSP 78 (140)
Q Consensus 1 k~iil~VdR-ld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~-~~~y~~~~~~l~~lv~~IN~~~g~~~~~p 78 (140)
|+|++.+|- -+... ..++.-..+.+. ...++.++.+..+.... ....++.++.++++.+.+... |. ....
T Consensus 25 ~~ILv~vD~~s~~s~---~al~~A~~la~~---~~a~l~llhV~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-g~-~~~~ 96 (155)
T 3dlo_A 25 MPIVVAVDKKSDRAE---RVLRFAAEEARL---RGVPVYVVHSLPGGGRTKDEDIIEAKETLSWAVSIIRKE-GA-EGEE 96 (155)
T ss_dssp CCEEEECCSSSHHHH---HHHHHHHHHHHH---HTCCEEEEEEECCSTTSCHHHHHHHHHHHHHHHHHHHHT-TC-CEEE
T ss_pred CeEEEEECCCCHHHH---HHHHHHHHHHHh---cCCEEEEEEEEcCCCcccHHHHHHHHHHHHHHHHHHHhc-CC-CceE
Confidence 578888876 33332 222222222222 22467788776543321 122223444555555544432 21 1222
Q ss_pred EEEEeCCCCHHHHHHHHH--HcCEEEECCCC
Q psy9724 79 IRYIYGCISQDELASFYR--DAAVALVTPLR 107 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~--~ADv~vvts~r 107 (140)
.......-+.+++..+-+ .+|.+++-+..
T Consensus 97 ~~~v~~G~~~~~I~~~a~~~~~DLIV~G~~g 127 (155)
T 3dlo_A 97 HLLVRGKEPPDDIVDFADEVDAIAIVIGIRK 127 (155)
T ss_dssp EEEESSSCHHHHHHHHHHHTTCSEEEEECCE
T ss_pred EEEecCCCHHHHHHHHHHHcCCCEEEECCCC
Confidence 122333456788888777 79999997764
No 71
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=41.42 E-value=57 Score=22.26 Aligned_cols=25 Identities=20% Similarity=0.224 Sum_probs=17.0
Q ss_pred eCCCCHHHHHHHH--HHcCEEEECCCCC
Q psy9724 83 YGCISQDELASFY--RDAAVALVTPLRD 108 (140)
Q Consensus 83 ~~~~~~~el~aly--~~ADv~vvts~rd 108 (140)
.+ -+.+++..+- ..+|.+++-+...
T Consensus 104 ~G-~~~~~I~~~a~~~~~DLIV~G~~g~ 130 (163)
T 1tq8_A 104 VG-APVDALVNLADEEKADLLVVGNVGL 130 (163)
T ss_dssp CS-SHHHHHHHHHHHTTCSEEEEECCCC
T ss_pred cC-CHHHHHHHHHHhcCCCEEEECCCCC
Confidence 44 3567777655 4689999988743
No 72
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=40.14 E-value=40 Score=26.99 Aligned_cols=69 Identities=19% Similarity=0.169 Sum_probs=42.0
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ 97 (140)
++.+++.-|++.+ ++...|+.. +|. +.. .+...+++++|+..|...++.-++..+|.-+.+|-.+++..
T Consensus 36 ~~~ll~~vp~l~~~~~i~~~~~~~idS~-~mt-----~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~ 107 (332)
T 2wlt_A 36 VKELLKAIPSLNKIARIQGEQVSNIGSQ-DMN-----EEIWFKLAQRAQELLDDSRIQGVVITHGTDTLEESAYFLNL 107 (332)
T ss_dssp TTHHHHTCCSGGGTCEEEEEEEEEECGG-GCC-----HHHHHHHHHHHHHHHTSTTCCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHhCccccccceEEEEEeccCCcc-cCC-----HHHHHHHHHHHHHHhccCCCCEEEEecCchhHHHHHHHHHH
Confidence 4566777787754 566677764 332 111 12334566666666644445667777888888887776654
No 73
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=39.74 E-value=34 Score=27.36 Aligned_cols=69 Identities=19% Similarity=0.181 Sum_probs=40.4
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ 97 (140)
++.+++.-|++.+ ++...|+.. +|. +.. .+...+++++|+..|...++.-++..+|.-+.+|-.+++..
T Consensus 34 ~~~ll~~~p~l~~~~~i~~~~~~~idS~-~mt-----~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~ 105 (330)
T 1wsa_A 34 VDKLLAAVPAINDLATIKGEQISSIGSQ-EMT-----GKVWLKLAKRVNELLAQKETEAVIITHGTDTMEETAFFLNL 105 (330)
T ss_dssp HHHHHHHCGGGGGTCEEEEEECCCCCGG-GCC-----HHHHHHHHHHHHHHHHSTTCCCEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHhCccccccceEEEEEeccCCCc-cCC-----HHHHHHHHHHHHHHhccCCCCEEEEEcCcchHHHHHHHHHH
Confidence 5667777887754 566677654 222 111 12234455555555533345556677888888887776654
No 74
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=39.68 E-value=77 Score=20.67 Aligned_cols=99 Identities=12% Similarity=0.166 Sum_probs=50.3
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC-----------C-hhHHHHHHHHHHHHHHHHh
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRT-----------D-VKEYQDLKEEMDQLVGRIN 68 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~-----------~-~~~y~~~~~~l~~lv~~IN 68 (140)
|+|++.+|-=+. -...++.-.++.+. +..++.++.+..+... . .+..++..++.++..+++-
T Consensus 7 ~~ILv~vD~s~~---s~~al~~a~~la~~---~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 80 (150)
T 3tnj_A 7 HHILLAVDFSSE---DSQVVQKVRNLASQ---IGARLSLIHVLDNIPMPDTPYGTAIPLDTETTYDAMLDVEKQKLSQIG 80 (150)
T ss_dssp SEEEEECCCSTT---HHHHHHHHHHHHHH---HTCEEEEEEEEC--------CTTCCCSSSCCCHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCHH---HHHHHHHHHHHHhh---cCCEEEEEEEEcCccccccccccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 578888886444 33333333333333 2346777777654211 0 0112233444444444444
Q ss_pred cCCCCCCcccEEEEeCCCCHHHHHHHHH--HcCEEEECCCC
Q psy9724 69 GRFTTPNWSPIRYIYGCISQDELASFYR--DAAVALVTPLR 107 (140)
Q Consensus 69 ~~~g~~~~~pv~~~~~~~~~~el~aly~--~ADv~vvts~r 107 (140)
.++|-... ......+ -+.+++..+-+ .+|.+++.+..
T Consensus 81 ~~~~~~~~-~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~ 119 (150)
T 3tnj_A 81 NTLGIDPA-HRWLVWG-EPREEIIRIAEQENVDLIVVGSHG 119 (150)
T ss_dssp HHHTCCGG-GEEEEES-CHHHHHHHHHHHTTCSEEEEEEC-
T ss_pred HHcCCCcc-eEEEecC-CHHHHHHHHHHHcCCCEEEEecCC
Confidence 44443222 2334455 46678888777 79999998763
No 75
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=39.66 E-value=80 Score=20.86 Aligned_cols=27 Identities=7% Similarity=-0.161 Sum_probs=18.3
Q ss_pred CCCHHHHHHHH---HHcCEEEECCC-CCCCc
Q psy9724 85 CISQDELASFY---RDAAVALVTPL-RDEWS 111 (140)
Q Consensus 85 ~~~~~el~aly---~~ADv~vvts~-rdGmn 111 (140)
.-+.+++..+. ..+|.+++-+. +.++.
T Consensus 104 g~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~ 134 (156)
T 3fg9_A 104 GDVDDVILEQVIPEFKPDLLVTGADTEFPHS 134 (156)
T ss_dssp SCHHHHHHHTHHHHHCCSEEEEETTCCCTTS
T ss_pred CCHHHHHHHHHHHhcCCCEEEECCCCCCccc
Confidence 34667777763 78899999876 34443
No 76
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=37.55 E-value=23 Score=24.84 Aligned_cols=61 Identities=23% Similarity=0.347 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCH
Q psy9724 18 HRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQ 88 (140)
Q Consensus 18 ~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~ 88 (140)
..+..++++++++ ++..+.+|.|-..+..+ ....+.+.+.++++..+|+ -||.+.....|-
T Consensus 40 ~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~-~~~~~~~~~f~~~L~~~~~----lpV~~~DERlTT 100 (138)
T 1nu0_A 40 PDWNIIERLLKEW-----QPDEIIVGLPLNMDGTE-QPLTARARKFANRIHGRFG----VEVKLHDERLST 100 (138)
T ss_dssp ECHHHHHHHHHHH-----CCSEEEEEEEECTTSCB-CHHHHHHHHHHHHHHHHHC----CCEEEEEEECCC
T ss_pred hHHHHHHHHHHHc-----CCCEEEEecccCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCH
Confidence 3467778888775 35578899885432211 1445666777777777664 478887655443
No 77
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=37.08 E-value=2.1e+02 Score=26.21 Aligned_cols=115 Identities=10% Similarity=0.063 Sum_probs=71.5
Q ss_pred EEEEecCccccCCHHH-HHHHHHHHH--HhC------CCCC----CCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhc
Q psy9724 3 LVLSVDRLDYTKGLVH-RLKAFETLL--EKH------PEHL----EKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRING 69 (140)
Q Consensus 3 iil~VdRld~~KGi~~-kl~A~~~~L--~~~------P~~~----~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~ 69 (140)
+++.+=|+..=|=-.+ .|.-++++. ..+ |+.. ..+++|--|-+.-.+ ..-+.+.+.+..+++-||.
T Consensus 602 fdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~iN~ 680 (879)
T 1ygp_A 602 FDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGY-YMAKLIIKLINCVADIVNN 680 (879)
T ss_dssp EEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTC-HHHHHHHHHHHHHHHHHTT
T ss_pred eeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHhcc
Confidence 5677888888887666 566666553 233 5411 245565555443333 3335778888889998887
Q ss_pred CCCCCCcc---cEEEEeC-CCCHHHHHHHHHHcCEEEECCCCCCCceeeecCCceeeecCCCC
Q psy9724 70 RFTTPNWS---PIRYIYG-CISQDELASFYRDAAVALVTPLRDEWSNSFSRSGNFRIKSAPSG 128 (140)
Q Consensus 70 ~~g~~~~~---pv~~~~~-~~~~~el~aly~~ADv~vvts~rdGmnLvA~~~G~~~v~~~~gg 128 (140)
. +... -|+|+.+ .++.+| -++.+|||-.-+|.+ +.=|| ||-=|+-+.-|
T Consensus 681 D---p~v~~~LKVVFlenY~VslAe--~iipaaDvseqista---g~EAS--GTsnMKfalNG 733 (879)
T 1ygp_A 681 D---ESIEHLLKVVFVADYNVSKAE--IIIPASDLSEHISTA---GTEAS--GTSNMKFVMNG 733 (879)
T ss_dssp C---GGGTTSEEEEEETTCCHHHHH--HHGGGCSEEEECCCT---TCCSC--CHHHHHHHTTT
T ss_pred C---hhhCCceEEEEeCCCCHHHHH--HhhhhhhhhhhCCCC---Ccccc--CchhhHHHHcC
Confidence 3 3333 3777664 355554 589999999999987 34455 55544444433
No 78
>3jvi_A Protein tyrosine phosphatase; niaid, ssgcid, seattle structural genomics center for infect disease, parasitic protozoan, dysentery; 1.80A {Entamoeba histolytica} PDB: 3js5_A* 3ily_A 3ido_A*
Probab=36.24 E-value=36 Score=24.13 Aligned_cols=45 Identities=13% Similarity=0.310 Sum_probs=25.3
Q ss_pred HHHHHHHhCC-CCCCCeEEE----------EEecCCCCChhHHHHHHHHHHHHHHH
Q psy9724 22 AFETLLEKHP-EHLEKVTLL----------QIAVPSRTDVKEYQDLKEEMDQLVGR 66 (140)
Q Consensus 22 A~~~~L~~~P-~~~~kv~Lv----------qi~~psr~~~~~y~~~~~~l~~lv~~ 66 (140)
..+.+.+.+| +..+|+.++ .|..|.....+.|+...++|++.+..
T Consensus 94 ~~~~l~~~~p~~~~~kv~ll~~~~~~~~~~~I~DPy~~~~~~f~~~~~~I~~~~~~ 149 (161)
T 3jvi_A 94 NYYELLDRCPEQYKQKIFKMVDFCTTIKTTEVPDPYYGGEKGFHRVIDILEDACEN 149 (161)
T ss_dssp HHHHHHHHSCGGGGGGEEEGGGGCSSCCCSSCCCCC--CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCccccceEEehhhhcCCcCCCCCcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 4566677788 666777654 24456555555666555555554443
No 79
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=34.60 E-value=33 Score=26.47 Aligned_cols=40 Identities=5% Similarity=-0.033 Sum_probs=28.6
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
.+.+.+++.+ ++..+|+++. +-|+|.+ ++ |.|+|.-..+|
T Consensus 291 ~~~~~~p~~~---lL~~~~~~v~---h~G~~s~~Eal~~--GvP~v~~P~~~ 334 (400)
T 4amg_A 291 RVVEWIPLGA---LLETCDAIIH---HGGSGTLLTALAA--GVPQCVIPHGS 334 (400)
T ss_dssp EEECCCCHHH---HHTTCSEEEE---CCCHHHHHHHHHH--TCCEEECCC--
T ss_pred EEEeecCHHH---Hhhhhhheec---cCCccHHHHHHHh--CCCEEEecCcc
Confidence 4466778775 4678998774 5699987 66 99999866554
No 80
>2jqt_A H-NS/STPA-binding protein 2; CNU, YDGT, replication origin associated, ORIC, protein binding; NMR {Escherichia coli}
Probab=33.47 E-value=20 Score=22.78 Aligned_cols=27 Identities=33% Similarity=0.618 Sum_probs=19.0
Q ss_pred HHHHHHHHHHhcCCCCCCcccEEEEeCCCCHH-HHHHHHHHcC
Q psy9724 58 EEMDQLVGRINGRFTTPNWSPIRYIYGCISQD-ELASFYRDAA 99 (140)
Q Consensus 58 ~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~-el~aly~~AD 99 (140)
+.++++++++|- .++.+ |+.++|++||
T Consensus 17 eTLEkv~e~~~y---------------~L~~~~e~~~f~~AaD 44 (71)
T 2jqt_A 17 ESLEKLYDHLNY---------------TLTDDQELINMYRAAD 44 (71)
T ss_dssp HHHHHHHHHHHH---------------HTCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhc---------------cCCCHHHHHHHHHHHH
Confidence 566777777653 23445 8999999987
No 81
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=31.84 E-value=56 Score=23.02 Aligned_cols=44 Identities=14% Similarity=0.218 Sum_probs=27.4
Q ss_pred HHHHHHHhCCCCCCCeEEE------------EEecCCCCChhHHHHHHHHHHHHHHH
Q psy9724 22 AFETLLEKHPEHLEKVTLL------------QIAVPSRTDVKEYQDLKEEMDQLVGR 66 (140)
Q Consensus 22 A~~~~L~~~P~~~~kv~Lv------------qi~~psr~~~~~y~~~~~~l~~lv~~ 66 (140)
..+.+.+..|.. +|+.++ -|..|...+.+.|++..++|++.+..
T Consensus 93 ~~~~l~~~~p~~-~kv~~l~~~~~~~~~~~w~I~DP~~~~~~~f~~~~~~I~~~~~~ 148 (163)
T 1u2p_A 93 HARLLRQLGVEA-ARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPG 148 (163)
T ss_dssp HHHHHHHTTCCG-GGEEEGGGGSTTCCSSCCCCCCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCc-ceEEehhhhcccccCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 346667778887 777664 34557666555666665555555544
No 82
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca}
Probab=31.08 E-value=1.8e+02 Score=22.23 Aligned_cols=56 Identities=9% Similarity=0.117 Sum_probs=37.9
Q ss_pred EEEEecC---------ccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 3 LVLSVDR---------LDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 3 iil~VdR---------ld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
+++|++. ...++|-..=.+++.++|+++ .+. +.++ ... ....+.+.+.++.++.+.
T Consensus 7 LlIGi~~Y~~~~Y~~~~~~L~~~~nDa~~~~~~L~~~-Gf~--v~~l--~~~----~~t~~~i~~al~~l~~~~ 71 (285)
T 3bij_A 7 LALGLNAVDPKHYGGWAGKLNACEADAEDMAAIAAER-GFA--VTTL--MTK----AATRAKVIDAIGKAAKAL 71 (285)
T ss_dssp EEEECSCCCTTTTTTCCCCCSSHHHHHHHHHHHHHHT-TCE--EEEE--EGG----GCCHHHHHHHHHHHHHHC
T ss_pred EEEEeCCccccccCCCcccCCCCHHHHHHHHHHHHHc-CCc--eEEe--cCC----ccCHHHHHHHHHHHHHhC
Confidence 7888886 457899999999999999875 342 2222 111 112346777888888765
No 83
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=30.20 E-value=1.3e+02 Score=20.61 Aligned_cols=77 Identities=18% Similarity=0.146 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHH
Q psy9724 17 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 96 (140)
Q Consensus 17 ~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~ 96 (140)
..|+.++..+++..+.-+ + +.. +++ .+.++.++..++.. ++ ++.++++.++.+++...+.
T Consensus 16 ~~K~~~L~~ll~~~~~~~---~-lVF-~~~----------~~~~~~l~~~L~~~----~~-~~~~~hg~~~~~~r~~~~~ 75 (172)
T 1t5i_A 16 NEKNRKLFDLLDVLEFNQ---V-VIF-VKS----------VQRCIALAQLLVEQ----NF-PAIAIHRGMPQEERLSRYQ 75 (172)
T ss_dssp GGHHHHHHHHHHHSCCSS---E-EEE-CSS----------HHHHHHHHHHHHHT----TC-CEEEECTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCc---E-EEE-ECC----------HHHHHHHHHHHHhc----CC-CEEEEECCCCHHHHHHHHH
Confidence 468899999999886432 2 222 232 22333444444332 22 4667789999888766554
Q ss_pred -----HcCEEEECCC-CCCCcee
Q psy9724 97 -----DAAVALVTPL-RDEWSNS 113 (140)
Q Consensus 97 -----~ADv~vvts~-rdGmnLv 113 (140)
..+|++.|+. ..|+|+-
T Consensus 76 ~f~~g~~~vLvaT~~~~~Gldi~ 98 (172)
T 1t5i_A 76 QFKDFQRRILVATNLFGRGMDIE 98 (172)
T ss_dssp HHHTTSCSEEEESSCCSTTCCGG
T ss_pred HHHCCCCcEEEECCchhcCcchh
Confidence 3578888875 6788874
No 84
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=30.15 E-value=66 Score=25.30 Aligned_cols=43 Identities=9% Similarity=0.226 Sum_probs=29.7
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee--eecCCceeeecCCCCc
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS--FSRSGNFRIKSAPSGN 129 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv--A~~~G~~~v~~~~gg~ 129 (140)
.+.+.+++++ ++..||+++..+ |.|.+ |+..|.|+|.-..+|-
T Consensus 271 ~~~~~~~~~~---ll~~~d~~v~~g---G~~t~~Eal~~GvP~v~~p~~~d 315 (404)
T 3h4t_A 271 LVVGEVNHQV---LFGRVAAVVHHG---GAGTTTAVTRAGAPQVVVPQKAD 315 (404)
T ss_dssp EEESSCCHHH---HGGGSSEEEECC---CHHHHHHHHHHTCCEEECCCSTT
T ss_pred EEecCCCHHH---HHhhCcEEEECC---cHHHHHHHHHcCCCEEEcCCccc
Confidence 3456788765 457899999654 77766 3334999998766553
No 85
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=29.42 E-value=40 Score=25.12 Aligned_cols=50 Identities=10% Similarity=0.077 Sum_probs=30.7
Q ss_pred ecCccccCCHHHHHHHHHHHHHhCCC-CCCCeEEEEEecCCCCChhHHHHHHHHHHH
Q psy9724 7 VDRLDYTKGLVHRLKAFETLLEKHPE-HLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 62 (140)
Q Consensus 7 VdRld~~KGi~~kl~A~~~~L~~~P~-~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~ 62 (140)
+..+.+-+.-...++++.+||+++|. ...+|.|+.. . .++|+.+++++.+
T Consensus 141 ~~G~p~~~aa~i~~~~v~~fl~~~~~~~l~~V~fv~f---~---~~~~~~f~~~l~~ 191 (199)
T 3kh6_A 141 NAGKNPITVADNIIDAIVDFSSQHSTPSLKTVKVVIF---Q---PELLNIFYDSMKK 191 (199)
T ss_dssp TTCCCHHHHHHHHHHHHHHHHHHCSSCSCCEEEEEES---S---THHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEEC---C---HHHHHHHHHHHHh
Confidence 44556666667788999999999863 3334544432 1 2556666555543
No 86
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=29.35 E-value=39 Score=27.22 Aligned_cols=68 Identities=21% Similarity=0.225 Sum_probs=40.6
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ 97 (140)
++++++.-|++.+ ++...|+.. +|. +.. .+...+++++|+..|. .++.-++..++.-+.+|-..++..
T Consensus 40 ~~~ll~~vp~l~~~~~i~~~~~~~idS~-~m~-----~~~~~~la~~i~~~~~-~~~dGvVItHGTDTm~~TA~~L~~ 110 (334)
T 3nxk_A 40 IDVLIKAVPQIRDLADISWEQIANIDSS-NMC-----DEIWLRLAKKIAKLFA-EGIDGVVITHGTDTMEETAYFLNL 110 (334)
T ss_dssp HHHHTTTCTTHHHHSEEEEEEEEEECGG-GCC-----HHHHHHHHHHHHHHHH-TTCCEEEEECCSTTHHHHHHHHHH
T ss_pred HHHHHHhCccccccceEEEEEecccCcc-cCC-----HHHHHHHHHHHHHHhh-cCCCeEEEECCCchHHHHHHHHHH
Confidence 5677777777654 566667654 322 111 1222445555555553 245667777899999998877764
No 87
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=29.00 E-value=1.4e+02 Score=20.25 Aligned_cols=77 Identities=13% Similarity=0.193 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHH
Q psy9724 17 VHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 96 (140)
Q Consensus 17 ~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~ 96 (140)
..|+.++..+++..+.- + ++ .. +++ .+.++.++..++.. + .++.++++.++.+++...+.
T Consensus 20 ~~K~~~L~~ll~~~~~~--~-~l-VF-~~~----------~~~~~~l~~~L~~~----~-~~~~~~hg~~~~~~r~~~~~ 79 (163)
T 2hjv_A 20 ENKFSLLKDVLMTENPD--S-CI-IF-CRT----------KEHVNQLTDELDDL----G-YPCDKIHGGMIQEDRFDVMN 79 (163)
T ss_dssp GGHHHHHHHHHHHHCCS--S-EE-EE-CSS----------HHHHHHHHHHHHHT----T-CCEEEECTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCC--c-EE-EE-ECC----------HHHHHHHHHHHHHc----C-CcEEEEeCCCCHHHHHHHHH
Confidence 56889999999876543 2 22 22 232 22233344444332 2 24667799999888776554
Q ss_pred H-----cCEEEECCC-CCCCcee
Q psy9724 97 D-----AAVALVTPL-RDEWSNS 113 (140)
Q Consensus 97 ~-----ADv~vvts~-rdGmnLv 113 (140)
. .+|++.|.. ..|+|+-
T Consensus 80 ~f~~g~~~vlv~T~~~~~Gld~~ 102 (163)
T 2hjv_A 80 EFKRGEYRYLVATDVAARGIDIE 102 (163)
T ss_dssp HHHTTSCSEEEECGGGTTTCCCS
T ss_pred HHHcCCCeEEEECChhhcCCchh
Confidence 3 468888865 6788874
No 88
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=28.21 E-value=94 Score=23.61 Aligned_cols=68 Identities=12% Similarity=0.116 Sum_probs=38.6
Q ss_pred CCeEEEEEecC-CCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEe--------CCCCHHHHHHHHHHcCEEEEC
Q psy9724 35 EKVTLLQIAVP-SRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIY--------GCISQDELASFYRDAAVALVT 104 (140)
Q Consensus 35 ~kv~Lvqi~~p-sr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~--------~~~~~~el~aly~~ADv~vvt 104 (140)
+.+.+||+-+. .......| ....-+.++++++|.++-.+ ..|...-. ..-..++...+++.||+.++.
T Consensus 86 ~~~~~V~l~Gg~~~~~~~~~-~~n~i~~~lA~~~~~~~~~l-~aP~~~~~~~~~~~l~~~~~i~~vl~~~~~aDiai~G 162 (266)
T 3efb_A 86 RQLICVPIIGGPSGKLESRY-HVNTLTYSAAAKLKGESHLA-DFPALLDNPLIRNGIMQSQHFKTISAYWDNLDIALVG 162 (266)
T ss_dssp CCCEEEESBCBCTTSSCGGG-CHHHHHHHHHHHTTCEECCC-CSBSBCSSHHHHHHHHTSHHHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEEcCCCCCCCCcccc-CHHHHHHHHHHHhCCeEEEE-eCCeecCCHHHHHHHHhChHHHHHHHHHhcCCEEEEe
Confidence 36888997543 33222233 12234567788877776554 33432211 122335666789999999984
No 89
>3o7i_A OHCU decarboxylase; lyase; 1.50A {Klebsiella pneumoniae subsp} PDB: 3o7h_A 3o7j_A* 3o7k_A
Probab=28.16 E-value=20 Score=26.71 Aligned_cols=69 Identities=25% Similarity=0.205 Sum_probs=32.7
Q ss_pred HHHHHhCCCCCCCeEEE-EEecCCCCChh----HHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHH
Q psy9724 24 ETLLEKHPEHLEKVTLL-QIAVPSRTDVK----EYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 96 (140)
Q Consensus 24 ~~~L~~~P~~~~kv~Lv-qi~~psr~~~~----~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~ 96 (140)
..+|.-||++-++...- ..+.-|..+.. .-.+...++.++-.+-..||| +.-|++..+. +.+++++-++
T Consensus 84 ~~~l~aHP~Lg~~~~~~~~lt~~S~~EQa~~~~~~~~e~~~L~~LN~~Ye~kFG---fpFVi~v~G~-s~~~IL~~l~ 157 (189)
T 3o7i_A 84 NAALSAHPRIGEKPTGSQAHAALSRQEQSSVDSENERLAQALREGNARYEARFG---RVFLIRAKGR-SGEEILQALT 157 (189)
T ss_dssp HHHHTTCCCTTSSCC----------------CCHHHHHHHHHHHHHHHHHHHHS---SCCCCCCTTC-CHHHHHHHHH
T ss_pred HHHHHhCCccccccccccchhhhhHHHHhhhcCCCHHHHHHHHHHHHHHHHHCC---CceEEecCCC-CHHHHHHHHH
Confidence 34688899998765321 11111221110 011233444444444445554 5556665555 8888776543
No 90
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=28.05 E-value=39 Score=25.46 Aligned_cols=54 Identities=11% Similarity=0.024 Sum_probs=35.9
Q ss_pred cEEEEeCCCCHHHHHHHHHHcCEEEECCCCCC----CceeeecCCceeeecCCCCccc
Q psy9724 78 PIRYIYGCISQDELASFYRDAAVALVTPLRDE----WSNSFSRSGNFRIKSAPSGNRT 131 (140)
Q Consensus 78 pv~~~~~~~~~~el~aly~~ADv~vvts~rdG----mnLvA~~~G~~~v~~~~gg~~~ 131 (140)
.+..+...++.+.+..++..+|+++.+.-... +|-.+.+.|.|.|...+.|...
T Consensus 102 ~v~~~~~~~~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~~p~i~~~~~g~~g 159 (249)
T 1jw9_B 102 AITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEG 159 (249)
T ss_dssp EEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCEEEEEEEBTEE
T ss_pred EEEEEeccCCHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcCCCEEEeeeccceE
Confidence 35556777887778888999999998762211 1222445688888876665443
No 91
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=28.02 E-value=1.8e+02 Score=21.71 Aligned_cols=48 Identities=6% Similarity=-0.110 Sum_probs=35.7
Q ss_pred cccEEEEeC---CCCHHHHHHHHH---HcCEEEECCCCCCCceeeec--CCceeee
Q psy9724 76 WSPIRYIYG---CISQDELASFYR---DAAVALVTPLRDEWSNSFSR--SGNFRIK 123 (140)
Q Consensus 76 ~~pv~~~~~---~~~~~el~aly~---~ADv~vvts~rdGmnLvA~~--~G~~~v~ 123 (140)
..+|..+.. .++.+++..++. ..|+++.|+.-.|.||++.+ .|.|++=
T Consensus 103 ~~~vliigaD~P~L~~~~l~~a~~~l~~~d~VigPa~dGG~~llg~~~~~~~P~lF 158 (242)
T 3cgx_A 103 YDRVVLMGSDIPDYPCELVQKALNDLQHYDAAIGPAFDGGYYLIGFRKDSFCPDVF 158 (242)
T ss_dssp CSEEEEECSSCTTCCHHHHHHHHHHTTTCSEEEEEBTTSSEEEEEEEGGGCCGGGG
T ss_pred CCeEEEEcCCCCCCCHHHHHHHHHHhccCCeEEEEcCCCCEEEEecccCCCChhhh
Confidence 456766654 377888877765 45899999988889999887 6777753
No 92
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=27.40 E-value=33 Score=27.45 Aligned_cols=70 Identities=17% Similarity=0.241 Sum_probs=39.5
Q ss_pred HHHHHHhCCCCCC--CeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ 97 (140)
++.+++.-|++.+ ++...|+..-..++.. .+...+++++|+..|...++.-++..+|.-+.+|-.+++..
T Consensus 33 ~~~ll~~~p~l~~~~~i~~~~~~~idS~~mt-----~~~w~~la~~I~~~~~~~~~dG~VItHGTDTmeeTA~~Ls~ 104 (331)
T 1agx_A 33 VDALIKAVPQVNDLANITGIQALQVASESIT-----DKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNL 104 (331)
T ss_dssp HHHHHTTSTTHHHHSEEEEECCCCBCGGGCC-----HHHHHHHHHHHHHHHTSTTCCEEEEECCGGGHHHHHHHHHH
T ss_pred HHHHHHhCccccccceEEEEEeccCCcccCC-----HHHHHHHHHHHHHHhccCCCCEEEEecCcchHHHHHHHHHH
Confidence 4555666666543 4556665531111111 23335566666666654445667777888888887776654
No 93
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=27.29 E-value=48 Score=21.77 Aligned_cols=62 Identities=19% Similarity=0.272 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCC
Q psy9724 15 GLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCIS 87 (140)
Q Consensus 15 Gi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~ 87 (140)
.....+..++++.+++ ++..+.+|.|-..+..+ ....+.+++.++++..+ + -||.+....+|
T Consensus 35 ~~~~~~~~l~~li~e~-----~v~~iVvGlP~~mdGt~-~~~~~~~~~f~~~L~~~-~----lpV~~~DERlT 96 (98)
T 1iv0_A 35 TLEEDVEALLDFVRRE-----GLGKLVVGLPLRTDLKE-SAQAGKVLPLVEALRAR-G----VEVELWDERFT 96 (98)
T ss_dssp CHHHHHHHHHHHHHHH-----TCCEEEEECCCCCCSSS-CCCSSTTHHHHHHHHHT-T----CEEEEECCSCC
T ss_pred CcHHHHHHHHHHHHHc-----CCCEEEEeeccCCCCCc-CHHHHHHHHHHHHHhcC-C----CCEEEECCCCC
Confidence 4567788888888876 35678999885432211 12223344455555543 2 48888776654
No 94
>1jw2_A Hemolysin expression modulating protein HHA; structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Escherichia coli} SCOP: a.23.5.1 PDB: 2jvp_A 2k5s_A
Probab=26.46 E-value=27 Score=22.27 Aligned_cols=28 Identities=25% Similarity=0.463 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHHcC
Q psy9724 57 KEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRDAA 99 (140)
Q Consensus 57 ~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~AD 99 (140)
.+.+++.+++.|- .++.+|+.++|++||
T Consensus 21 ~eTLEkv~e~~~y---------------~Lt~~el~~f~~AaD 48 (72)
T 1jw2_A 21 IDTLERVIEKNKY---------------ELSDNELAVFYSAAD 48 (72)
T ss_dssp HHHHHHHHHHHHH---------------HSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc---------------cCCHHHHHHHHHHHH
Confidence 3566777776542 457789999999998
No 95
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=26.44 E-value=1.2e+02 Score=24.05 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=41.3
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 96 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~ 96 (140)
++.+++ -|++.+ ++...|+.. +|. +.. .+...+++++|+..|. ++.-++..+|.-+.+|-.+++.
T Consensus 27 ~~~ll~-vp~l~~~~~i~~~~~~~idS~-~mt-----~~~w~~la~~I~~~~~--~~dG~VItHGTDTmeeTA~~Ls 94 (328)
T 1wls_A 27 VSKILK-LAGISSEAKIEARDLMNVDST-LIQ-----PSDWERLAKEIEKEVW--EYDGIVITHGTDTMAYSASMLS 94 (328)
T ss_dssp HHHHHH-TTTTTSCSBCCEEEEEEECGG-GCC-----HHHHHHHHHHHHHHTT--TCSEEEEECCGGGHHHHHHHHH
T ss_pred HHHHHh-CccccCCceEEEEEecCCCCC-CCC-----HHHHHHHHHHHHHHhc--cCCeEEEEcCCchHHHHHHHHH
Confidence 567788 888866 466667664 332 111 1233556666666664 3556777788889998887776
No 96
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=25.61 E-value=1.7e+02 Score=20.35 Aligned_cols=74 Identities=18% Similarity=0.400 Sum_probs=46.4
Q ss_pred HHHHHHHHhCCCCCCCeEEEEEec-------CCC---CChhHHHHHHHHHHHHHHHHhcCC-----------CCCC--cc
Q psy9724 21 KAFETLLEKHPEHLEKVTLLQIAV-------PSR---TDVKEYQDLKEEMDQLVGRINGRF-----------TTPN--WS 77 (140)
Q Consensus 21 ~A~~~~L~~~P~~~~kv~Lvqi~~-------psr---~~~~~y~~~~~~l~~lv~~IN~~~-----------g~~~--~~ 77 (140)
.+++.|++..++ +.|+++-+-- |.. ++.+.|.+|.+....++++.+++| |... |.
T Consensus 11 ~~~~~~~~~~~~--~pv~MlNLlrf~~~a~y~dg~~vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~~~~lEG~~~e~~~ 88 (143)
T 3hhl_A 11 EVFAQFRANDRE--GPIHMLNLVRLRPRAAYPDGRETTGAEAYAAYGRDSGPVSERLGGXVVWQGQFELMLIGPQDEHWD 88 (143)
T ss_dssp HHHHHHHHCCCS--SCEEEEEEEEECSBCCCTTCCCCBHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEEEESCTTCCCS
T ss_pred HHHHHHHhCCCC--CCEEEEehhcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEeecCCceeEECCCCCCCC
Confidence 567777764433 5677664432 211 345779999999999999988887 2222 44
Q ss_pred cEEEEeCCCCHHHHHHHHHH
Q psy9724 78 PIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 78 pv~~~~~~~~~~el~aly~~ 97 (140)
-+ .+...-|.+...++|..
T Consensus 89 ~~-viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 89 HV-FIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp EE-EEEEESCHHHHHHHHHC
T ss_pred eE-EEEECCCHHHHHHHHcC
Confidence 33 33445578877777753
No 97
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=25.22 E-value=1.7e+02 Score=20.00 Aligned_cols=80 Identities=9% Similarity=0.096 Sum_probs=49.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHH
Q psy9724 14 KGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELAS 93 (140)
Q Consensus 14 KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~a 93 (140)
+.-..|+.++..+++..+.- ..+.. +++ ++.++.++..++.. ++ ++.++++.++.+++..
T Consensus 16 ~~~~~K~~~L~~ll~~~~~~----~~lVF-~~~----------~~~~~~l~~~L~~~----~~-~~~~~~g~~~~~~R~~ 75 (175)
T 2rb4_A 16 EHRKDKYQALCNIYGSITIG----QAIIF-CQT----------RRNAKWLTVEMIQD----GH-QVSLLSGELTVEQRAS 75 (175)
T ss_dssp SSHHHHHHHHHHHHTTSCCS----EEEEE-CSC----------HHHHHHHHHHHHTT----TC-CEEEECSSCCHHHHHH
T ss_pred CChHhHHHHHHHHHHhCCCC----CEEEE-ECC----------HHHHHHHHHHHHHc----CC-cEEEEeCCCCHHHHHH
Confidence 34456999999999877532 12222 232 23334444444432 22 4667799999888776
Q ss_pred HHH-----HcCEEEECCC-CCCCcee
Q psy9724 94 FYR-----DAAVALVTPL-RDEWSNS 113 (140)
Q Consensus 94 ly~-----~ADv~vvts~-rdGmnLv 113 (140)
... ..+|++.|+. ..|+|+-
T Consensus 76 ~~~~f~~g~~~vLvaT~~~~~Gid~~ 101 (175)
T 2rb4_A 76 IIQRFRDGKEKVLITTNVCARGIDVK 101 (175)
T ss_dssp HHHHHHTTSCSEEEECCSCCTTTCCT
T ss_pred HHHHHHcCCCeEEEEecchhcCCCcc
Confidence 554 3578888875 6788874
No 98
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=25.18 E-value=58 Score=23.61 Aligned_cols=46 Identities=9% Similarity=0.049 Sum_probs=28.1
Q ss_pred cCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHH
Q psy9724 8 DRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEM 60 (140)
Q Consensus 8 dRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l 60 (140)
..+.+.......++++.+||+++|.+. +|.|+.. +.++|+.+++.+
T Consensus 126 ~g~p~~~aa~i~~~~v~~~l~~~~~~~-~V~~v~~------~~~~~~~~~~~l 171 (184)
T 1spv_A 126 YGYPRAAAAEIAVKTVSEFITRHALPE-QVYFVCY------DEENAHLYERLL 171 (184)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHCCSSS-EEEEEES------SHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHhCCCCC-EEEEEEC------CHHHHHHHHHHH
Confidence 344455556667889999999998653 5555433 234555554433
No 99
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=24.97 E-value=40 Score=26.57 Aligned_cols=40 Identities=13% Similarity=0.188 Sum_probs=31.2
Q ss_pred EEeCCCCHHHHHHHHHHcCEEEECCCCCCCcee----eecCCceeeecCCCC
Q psy9724 81 YIYGCISQDELASFYRDAAVALVTPLRDEWSNS----FSRSGNFRIKSAPSG 128 (140)
Q Consensus 81 ~~~~~~~~~el~aly~~ADv~vvts~rdGmnLv----A~~~G~~~v~~~~gg 128 (140)
.+.+.+++.++ +..||+++. +-|.|.+ ++ |.|+|.-..++
T Consensus 288 ~~~~~~~~~~~---l~~~d~~v~---~~G~~t~~Ea~~~--G~P~i~~p~~~ 331 (415)
T 1iir_A 288 FAIGEVNHQVL---FGRVAAVIH---HGGAGTTHVAARA--GAPQILLPQMA 331 (415)
T ss_dssp EECSSCCHHHH---GGGSSEEEE---CCCHHHHHHHHHH--TCCEEECCCST
T ss_pred EEeCcCChHHH---HhhCCEEEe---CCChhHHHHHHHc--CCCEEECCCCC
Confidence 44678888764 699999997 4688887 66 99999887655
No 100
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=24.63 E-value=77 Score=25.43 Aligned_cols=68 Identities=19% Similarity=0.154 Sum_probs=37.2
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCCC-ChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSRT-DVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr~-~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ 97 (140)
++++++.-|++.+ ++...|+.. +|.. ..++. .+++++|+..+...++.-++..++.-+.+|-.+++..
T Consensus 41 ~~~ll~~vp~l~~~~~i~~~~~~~idS~~mt~~~w-------~~la~~i~~~l~~~~~dGvVItHGTDTm~~TA~~L~~ 112 (337)
T 4pga_A 41 VDKLIAGVPELADLANVRGEQVMQIASESITNDDL-------LKLGKRVAELADSNDVDGIVITHGTDTLEETAYFLNL 112 (337)
T ss_dssp HHHHHHTCTTHHHHCEEEEEEEEEECGGGCCHHHH-------HHHHHHHHHHHHCTTCSEEEEECCSTTHHHHHHHHHH
T ss_pred HHHHHHhCccccccceEEEEEeccCCCCcCCHHHH-------HHHHHHHHHHhhccCCCeEEEECCCccHHHHHHHHHH
Confidence 4556666666543 455666653 3321 22333 3344444442111245567777899999998887764
No 101
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=24.29 E-value=2e+02 Score=20.53 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHH
Q psy9724 16 LVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFY 95 (140)
Q Consensus 16 i~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly 95 (140)
...|+.++.++++.++.-+ + +. -+++ ++.++.++..++.. + .++.++++.++.+++...+
T Consensus 15 ~~~k~~~l~~ll~~~~~~~---~-lV-F~~~----------~~~~~~l~~~L~~~----~-~~~~~lhg~~~~~~r~~~~ 74 (212)
T 3eaq_A 15 VRGRLEVLSDLLYVASPDR---A-MV-FTRT----------KAETEEIAQGLLRL----G-HPAQALHGDLSQGERERVL 74 (212)
T ss_dssp TTSHHHHHHHHHHHHCCSC---E-EE-ECSS----------HHHHHHHHHHHHHH----T-CCEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCe---E-EE-EeCC----------HHHHHHHHHHHHHc----C-CCEEEEECCCCHHHHHHHH
Confidence 3568999999998877432 2 22 2332 12223333333321 2 2466779999988877655
Q ss_pred H-----HcCEEEECCC-CCCCcee
Q psy9724 96 R-----DAAVALVTPL-RDEWSNS 113 (140)
Q Consensus 96 ~-----~ADv~vvts~-rdGmnLv 113 (140)
. ..+|++.|.. ..|+|+-
T Consensus 75 ~~f~~g~~~vlvaT~~~~~Gidi~ 98 (212)
T 3eaq_A 75 GAFRQGEVRVLVATDVAARGLDIP 98 (212)
T ss_dssp HHHHSSSCCEEEECTTTTCSSSCC
T ss_pred HHHHCCCCeEEEecChhhcCCCCc
Confidence 4 3568888876 5687774
No 102
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=23.47 E-value=66 Score=23.48 Aligned_cols=48 Identities=15% Similarity=0.180 Sum_probs=29.0
Q ss_pred CccccCCHHHHHHHHHHHHHhCC-CCCCCeEEEEEecCCCCChhHHHHHHHHHHH
Q psy9724 9 RLDYTKGLVHRLKAFETLLEKHP-EHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQ 62 (140)
Q Consensus 9 Rld~~KGi~~kl~A~~~~L~~~P-~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~ 62 (140)
.+.+-......++++.+||+++| ....+|.|+... .++|+.+++++.+
T Consensus 132 g~p~~~aa~i~~~~v~~fl~~~~~~~l~~V~fv~f~------~~~~~~f~~~l~k 180 (183)
T 4abl_A 132 KQHPDKVAEAIIDAIEDFVQKGSAQSVKKVKVVIFL------PQVLDVFYANMKK 180 (183)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCCSSCCEEEEEESC------HHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECC------HHHHHHHHHHHHh
Confidence 34444555677889999999986 333444444321 2556666665544
No 103
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription factor, RNA polymerase recycling, activator, ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Probab=23.06 E-value=2.5e+02 Score=25.35 Aligned_cols=81 Identities=17% Similarity=0.155 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHH--
Q psy9724 16 LVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELAS-- 93 (140)
Q Consensus 16 i~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~a-- 93 (140)
...|+.++.++++.++.-+ .+..+ .+ .+.+..+...++.++| + ++..+++.++.+++..
T Consensus 487 ~~~K~~~L~~ll~~~~~~k----~iVF~-~~----------~~~~~~l~~~L~~~~g---~-~~~~lhG~~~~~~R~~~l 547 (968)
T 3dmq_A 487 FDPRVEWLMGYLTSHRSQK----VLVIC-AK----------AATALQLEQVLREREG---I-RAAVFHEGMSIIERDRAA 547 (968)
T ss_dssp TSHHHHHHHHHHHHTSSSC----CCEEC-SS----------THHHHHHHHHHHTTTC---C-CEEEECTTSCTTHHHHHH
T ss_pred ccHHHHHHHHHHHhCCCCC----EEEEe-Cc----------HHHHHHHHHHHHHHcC---C-cEEEEeCCCCHHHHHHHH
Confidence 4568999999998865432 12222 21 2233445555655444 2 4667788887655544
Q ss_pred -HHHH----cCEEEECCC-CCCCceeee
Q psy9724 94 -FYRD----AAVALVTPL-RDEWSNSFS 115 (140)
Q Consensus 94 -ly~~----ADv~vvts~-rdGmnLvA~ 115 (140)
-++. .+|++.|.. .+|+|+-.+
T Consensus 548 ~~F~~g~~~~~vLvaT~v~~~GlDl~~~ 575 (968)
T 3dmq_A 548 AWFAEEDTGAQVLLCSEIGSEGRNFQFA 575 (968)
T ss_dssp HHHHSTTSSCEEEECSCCTTCSSCCTTC
T ss_pred HHHhCCCCcccEEEecchhhcCCCcccC
Confidence 4444 668877755 689988644
No 104
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=22.48 E-value=92 Score=26.05 Aligned_cols=66 Identities=15% Similarity=0.069 Sum_probs=33.4
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCC-CChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSR-TDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYR 96 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr-~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~ 96 (140)
++.+++.-|++.+ ++...|+.. +|. -..++..+ ++++|+..|.+ ++.-++..+|.-+.+|-++++.
T Consensus 120 ~~~ll~~vP~l~~~a~i~~~~~~~idSs~mtp~~w~~-------La~~I~~~~~~-~~DG~VItHGTDTMeeTA~~Ls 189 (438)
T 1zq1_A 120 AEELAKALPEIFEVANVKPKLLFNIFSEDMKPKHWVK-------IAHEVAKALNS-GDYGVVVAHGTDTMGYTAAALS 189 (438)
T ss_dssp HHHHHHHCGGGGGTSEEEEEECCCCCGGGCCHHHHHH-------HHHHHHHHHHT-TCSEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHhCcccccCceEEEEEeccCCcccCCHHHHHH-------HHHHHHHHhcc-CCCeEEEecCchhHHHHHHHHH
Confidence 4556666777754 466667664 222 12233333 44444443332 2344555566666666555544
No 105
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=22.40 E-value=84 Score=23.32 Aligned_cols=92 Identities=9% Similarity=0.154 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHH
Q psy9724 16 LVHRLKAFETLLEKHPEHLEKVTLLQIAVPSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFY 95 (140)
Q Consensus 16 i~~kl~A~~~~L~~~P~~~~kv~Lvqi~~psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly 95 (140)
+.....++.+|+... .++++| -+.+. ..++..+...+.+..+++ |+.++.. ... ++..+..
T Consensus 17 l~~~~~~l~~~~~~~----~~i~iI--~~a~~--~~~~~~~~~~~~~al~~l-------G~~~~~v-~~~---~d~~~~l 77 (229)
T 1fy2_A 17 LEHALPLIANQLNGR----RSAVFI--PFAGV--TQTWDEYTDKTAEVLAPL-------GVNVTGI-HRV---ADPLAAI 77 (229)
T ss_dssp TTTTHHHHHHHHTTC----CEEEEE--CTTCC--SSCHHHHHHHHHHHHGGG-------TCEEEET-TSS---SCHHHHH
T ss_pred HHHHHHHHHHHhcCC----CeEEEE--ECCCC--CCCHHHHHHHHHHHHHHC-------CCEEEEE-ecc---ccHHHHH
Confidence 445567788888632 244443 33321 122334455555555554 3333322 111 1233557
Q ss_pred HHcCEEEECCCCCCCcee--------------eecCCceeeecCCC
Q psy9724 96 RDAAVALVTPLRDEWSNS--------------FSRSGNFRIKSAPS 127 (140)
Q Consensus 96 ~~ADv~vvts~rdGmnLv--------------A~~~G~~~v~~~~g 127 (140)
+.||.+++|- -+-..+. +.++|.|++.+-+|
T Consensus 78 ~~ad~I~lpG-G~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG 122 (229)
T 1fy2_A 78 EKAEIIIVGG-GNTFQLLKESRERGLLAPMADRVKRGALYIGWSAG 122 (229)
T ss_dssp HHCSEEEECC-SCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHH
T ss_pred hcCCEEEECC-CcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHH
Confidence 7899999997 6655443 33568888776555
No 106
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=21.91 E-value=1.6e+02 Score=18.74 Aligned_cols=26 Identities=12% Similarity=0.187 Sum_probs=19.0
Q ss_pred EEeCCCCHHHHHHHHH--HcCEEEECCCC
Q psy9724 81 YIYGCISQDELASFYR--DAAVALVTPLR 107 (140)
Q Consensus 81 ~~~~~~~~~el~aly~--~ADv~vvts~r 107 (140)
...+. +.+++..+-+ .+|..++.+..
T Consensus 82 ~~~g~-~~~~I~~~a~~~~~dliV~G~~~ 109 (137)
T 2z08_A 82 LLEGV-PAEAILQAARAEKADLIVMGTRG 109 (137)
T ss_dssp EEESS-HHHHHHHHHHHTTCSEEEEESSC
T ss_pred EEecC-HHHHHHHHHHHcCCCEEEECCCC
Confidence 33554 6777888777 79999998774
No 107
>3n8i_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, hydrolase, protein-ligand complex; HET: NLA; 1.50A {Homo sapiens} SCOP: c.44.1.1 PDB: 5pnt_A* 1xww_A 1bvh_A 1dg9_A* 1phr_A 1pnt_A 1z12_A 1z13_A 1c0e_A 2p4u_A
Probab=21.56 E-value=1.1e+02 Score=21.58 Aligned_cols=45 Identities=16% Similarity=0.203 Sum_probs=29.2
Q ss_pred HHHHHHhCC---CCCCCeEEEE---------EecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 23 FETLLEKHP---EHLEKVTLLQ---------IAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 23 ~~~~L~~~P---~~~~kv~Lvq---------i~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
.+.+.+..| +..+|+.++. |..|..+...+|+...++|++.+..+
T Consensus 96 ~~~l~~~~p~~~~~~~kv~ll~~~~~~~~~dVpDPy~~~~~~F~~v~~~I~~~~~~l 152 (157)
T 3n8i_A 96 LRDLNRKSNQVKTCKAKIELLGSYDPQKQLIIEDPYYGNDSDFETVYQQCVRCCRAF 152 (157)
T ss_dssp HHHHHHHHTTSSCCCCEEEEGGGGCTTCCCCCCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCccCccceEEEHHHhCcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 445566667 5677887662 44566656666877777777777654
No 108
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=21.54 E-value=1.9e+02 Score=19.38 Aligned_cols=40 Identities=15% Similarity=0.294 Sum_probs=28.6
Q ss_pred HhCCCCCCCeEEEE--EecCCCCChhHHHHHHHHHHHHHHHH
Q psy9724 28 EKHPEHLEKVTLLQ--IAVPSRTDVKEYQDLKEEMDQLVGRI 67 (140)
Q Consensus 28 ~~~P~~~~kv~Lvq--i~~psr~~~~~y~~~~~~l~~lv~~I 67 (140)
+..|.+.+++.++. |..|.....+.|++..++|++.+..+
T Consensus 87 ~~~p~~~~~~~~~~~~i~DP~g~~~~~f~~~~~~i~~~~~~l 128 (131)
T 1jf8_A 87 NNCPILPPNVKKEHWGFDDPAGKEWSEFQRVRDEIKLAIEKF 128 (131)
T ss_dssp HHSCCCCTTSEEEECCCCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred hhCcCCCCCcEEEEecCCCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 44677778876664 44577666678888888888887765
No 109
>1yir_A Naprtase 2, nicotinate phosphoribosyltransferase 2; structural genomics, protein structure initiative, hypothetical protein, NYSGXRC, PSI; 2.10A {Pseudomonas aeruginosa} SCOP: c.1.17.2 d.41.2.2
Probab=21.46 E-value=3e+02 Score=22.52 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=31.8
Q ss_pred EEEEeCCCCHHHHHHHHHH---cCEE-------EECCC--CCCCcee----eecCCceeeec
Q psy9724 79 IRYIYGCISQDELASFYRD---AAVA-------LVTPL--RDEWSNS----FSRSGNFRIKS 124 (140)
Q Consensus 79 v~~~~~~~~~~el~aly~~---ADv~-------vvts~--rdGmnLv----A~~~G~~~v~~ 124 (140)
.+.+.+.++.+.+.+|++. +.+. ++++. ++.+|.| +| +|.|+++-
T Consensus 315 ~Iv~SdgLde~~i~~l~~~~~~~~~d~FGVGT~L~~~~~~~~~l~~V~Klv~~-nG~pv~K~ 375 (408)
T 1yir_A 315 TLVFSDGLDLPRALKIYRALQGRINVSFGIGTHFTCDLPGVEPMNIVVKMSAC-NGHPVAKI 375 (408)
T ss_dssp EEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCCCCCEEEEEEEE-TTEECCCC
T ss_pred EEEECCCCCHHHHHHHHHHhcCCCceEEEeChhhccCCCCCCccceEEEEEEE-CCeeeEec
Confidence 4566788999999999882 2222 23665 6888866 66 89988863
No 110
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=21.45 E-value=1.3e+02 Score=23.83 Aligned_cols=67 Identities=21% Similarity=0.190 Sum_probs=37.4
Q ss_pred HHHHHHhCCCCCC--CeEEEEEec-CCCCChhHHHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHHHHHHHHHH
Q psy9724 23 FETLLEKHPEHLE--KVTLLQIAV-PSRTDVKEYQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQDELASFYRD 97 (140)
Q Consensus 23 ~~~~L~~~P~~~~--kv~Lvqi~~-psr~~~~~y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~el~aly~~ 97 (140)
.+.+++.-|++.+ ++...|+.. +|. +.. .+...+++++|+..|... .-++..+|.-+.+|-.+++..
T Consensus 32 ~~~ll~~vp~l~~~~~i~~~~~~~idS~-~mt-----~~~w~~la~~I~~~~~~~--dG~VItHGTDTmeeTA~~Ls~ 101 (326)
T 1nns_A 32 VENLVNAVPQLKDIANVKGEQVVNIGSQ-DMN-----DNVWLTLAKKINTDCDKT--DGFVITHGTDTMEETAYFLDL 101 (326)
T ss_dssp HHHHHHTCGGGGGTCEEEEEEEEEECGG-GCC-----HHHHHHHHHHHHHHGGGC--SEEEEECCSSSHHHHHHHHHH
T ss_pred hHHHHHhCccccccceEEEEEeccCCcc-cCC-----HHHHHHHHHHHHHHhhcC--CcEEEEcCchhHHHHHHHHHH
Confidence 4556677777654 566667654 332 111 122344555555554332 346666888888887776654
No 111
>3b1j_C CP12; alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_C*
Probab=21.41 E-value=39 Score=17.17 Aligned_cols=15 Identities=20% Similarity=0.363 Sum_probs=12.2
Q ss_pred HHHHHHHHhCCCCCC
Q psy9724 21 KAFETLLEKHPEHLE 35 (140)
Q Consensus 21 ~A~~~~L~~~P~~~~ 35 (140)
.||+.|.+.+|+.-.
T Consensus 5 t~lE~yC~enPea~E 19 (26)
T 3b1j_C 5 PFFGDYCSENPDAAE 19 (26)
T ss_dssp TTHHHHHHHCTTSTT
T ss_pred cHHHHHHHHCCCcHH
Confidence 378999999998654
No 112
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=21.33 E-value=2.3e+02 Score=20.25 Aligned_cols=60 Identities=12% Similarity=-0.022 Sum_probs=30.7
Q ss_pred EEEEEecCCCCCh--hHHHHHHHHHHHHHHHHhcCCCCCCcc-cEEEEeCCCCHHHHHHHHHHcCEEEEC
Q psy9724 38 TLLQIAVPSRTDV--KEYQDLKEEMDQLVGRINGRFTTPNWS-PIRYIYGCISQDELASFYRDAAVALVT 104 (140)
Q Consensus 38 ~Lvqi~~psr~~~--~~y~~~~~~l~~lv~~IN~~~g~~~~~-pv~~~~~~~~~~el~aly~~ADv~vvt 104 (140)
+|+..|.|..... ..-+.+.+.+.+.+.+- | .+ .+..+....+.+++...+..||.+++-
T Consensus 15 iLii~gsP~~~~s~~s~~~~l~~~~~~~~~~~----g---~~v~~~dL~~~~d~~~~~~~l~~AD~iV~~ 77 (204)
T 2amj_A 15 ILIINGAKKFAHSNGQLNDTLTEVADGTLRDL----G---HDVRIVRADSDYDVKAEVQNFLWADVVIWQ 77 (204)
T ss_dssp EEEEECCC------CHHHHHHHHHHHHHHHHT----T---CEEEEEESSSCCCHHHHHHHHHHCSEEEEE
T ss_pred EEEEEcCCCcccCcCcHHHHHHHHHHHHHHHc----C---CEEEEEeCCccccHHHHHHHHHhCCEEEEE
Confidence 4566677753221 22234444444444432 1 12 122334456788888999999987653
No 113
>4emt_A Transmembrane protein 173; alpha/beta fold, innate immune sensor, C-DI-GMP, C-DI-AMP, M protein; HET: C2E; 1.50A {Homo sapiens} PDB: 4emu_A
Probab=20.87 E-value=71 Score=23.90 Aligned_cols=28 Identities=21% Similarity=0.459 Sum_probs=24.5
Q ss_pred HHHHHHHHhCCCCCCCeEEEEEecCCCC
Q psy9724 21 KAFETLLEKHPEHLEKVTLLQIAVPSRT 48 (140)
Q Consensus 21 ~A~~~~L~~~P~~~~kv~Lvqi~~psr~ 48 (140)
+.++.+|++.||.+++..||..-.|..+
T Consensus 140 r~L~~iL~~~pe~r~~~~LI~Y~~~~~g 167 (188)
T 4emt_A 140 RTLEDILADAPESQNNCRLIAYQEPADD 167 (188)
T ss_dssp HHHHHHHHHCHHHHTTEEEEEECCCTTC
T ss_pred HHHHHHHhcCHHHhCceEEEecCCcccC
Confidence 5778999999999999999999887544
No 114
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=20.75 E-value=1.7e+02 Score=18.59 Aligned_cols=98 Identities=9% Similarity=0.061 Sum_probs=47.1
Q ss_pred CEEEEEecCccccCCHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c--CC--------CC-ChhHHHHHHHHHHHHHHHHh
Q psy9724 1 MSLVLSVDRLDYTKGLVHRLKAFETLLEKHPEHLEKVTLLQIA-V--PS--------RT-DVKEYQDLKEEMDQLVGRIN 68 (140)
Q Consensus 1 k~iil~VdRld~~KGi~~kl~A~~~~L~~~P~~~~kv~Lvqi~-~--ps--------r~-~~~~y~~~~~~l~~lv~~IN 68 (140)
|+|++.+|-=+... ..++.-..+.+ .+..++.++.+. . |. .. .....+.+.++.++..+++
T Consensus 5 ~~ILv~~D~s~~s~---~al~~a~~la~---~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 77 (138)
T 1q77_A 5 KVLLVLTDAYSDCE---KAITYAVNFSE---KLGAELDILAVLEDVYNLERANVTFGLPFPPEIKEESKKRIERRLREV- 77 (138)
T ss_dssp EEEEEEESTTCCCH---HHHHHHHHHHT---TTCCEEEEEEECHHHHHHHHHHHHHCCCCCTHHHHHHHHHHHHHHHHH-
T ss_pred cEEEEEccCCHhHH---HHHHHHHHHHH---HcCCeEEEEEEecccccccccccccCCCCChHHHHHHHHHHHHHHHHH-
Confidence 57889988655433 22322223332 233467777765 3 10 01 1111223333333333333
Q ss_pred cC--CCCCC-cccEEEEeCCCCHHHHHHHHH--HcCEEEECCCC
Q psy9724 69 GR--FTTPN-WSPIRYIYGCISQDELASFYR--DAAVALVTPLR 107 (140)
Q Consensus 69 ~~--~g~~~-~~pv~~~~~~~~~~el~aly~--~ADv~vvts~r 107 (140)
.+ .+..+ +... ...+ -+.+++..+-+ .+|..++.+..
T Consensus 78 ~~~~~~~~~~~~~~-~~~g-~~~~~I~~~a~~~~~dliV~G~~g 119 (138)
T 1q77_A 78 WEKLTGSTEIPGVE-YRIG-PLSEEVKKFVEGKGYELVVWACYP 119 (138)
T ss_dssp HHHHHSCCCCCCEE-EECS-CHHHHHHHHHTTSCCSEEEECSCC
T ss_pred HHHhhccCCcceEE-EEcC-CHHHHHHHHHHhcCCCEEEEeCCC
Confidence 22 22222 2222 2344 46677777666 68999988763
No 115
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=20.45 E-value=93 Score=22.47 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcccEEEEeCCCCHH
Q psy9724 53 YQDLKEEMDQLVGRINGRFTTPNWSPIRYIYGCISQD 89 (140)
Q Consensus 53 y~~~~~~l~~lv~~IN~~~g~~~~~pv~~~~~~~~~~ 89 (140)
.++.++.+.+++.+|+..|+.....-|-...+.+...
T Consensus 16 ~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa 52 (181)
T 3acd_A 16 AEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFM 52 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHH
Confidence 3589999999999999999763211122234555444
No 116
>4ef4_A Transmembrane protein 173; sting/MITA/ERIS/MPYS/TMEM173, innate immune system, type I interferon, dimerization, C-DI-GMP; HET: C2E; 2.15A {Homo sapiens} PDB: 4ef5_A 4f9e_A 4f9g_A* 4f5e_A* 4f5d_A* 4f5w_A 4f5y_A*
Probab=20.11 E-value=2.7e+02 Score=21.85 Aligned_cols=27 Identities=22% Similarity=0.476 Sum_probs=23.1
Q ss_pred HHHHHHHHhCCCCCCCeEEEEEecCCC
Q psy9724 21 KAFETLLEKHPEHLEKVTLLQIAVPSR 47 (140)
Q Consensus 21 ~A~~~~L~~~P~~~~kv~Lvqi~~psr 47 (140)
+.++.+|++.||.+++..||..-.|..
T Consensus 179 rtL~~ILe~~pEcrn~~eLI~Y~d~~~ 205 (265)
T 4ef4_A 179 RTLEDILADAPESQNNCRLIAYQEPAD 205 (265)
T ss_dssp HHHHHHHHHCTTCSSCEEEEEECCC--
T ss_pred HHHHHHHhcCHHHhCceEEEecCCccc
Confidence 578899999999999999999988754
Done!