Query psy9726
Match_columns 381
No_of_seqs 231 out of 1367
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 18:01:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy9726.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/9726hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1x0l_A Homoisocitrate dehydrog 100.0 9E-109 3E-113 810.7 29.2 305 72-380 1-307 (333)
2 3blx_B Isocitrate dehydrogenas 100.0 6E-108 2E-112 809.8 27.5 310 66-380 15-329 (354)
3 3blx_A Isocitrate dehydrogenas 100.0 2E-107 5E-112 805.6 28.1 309 67-381 12-323 (349)
4 1w0d_A 3-isopropylmalate dehyd 100.0 2E-107 8E-112 802.2 28.4 306 73-380 2-319 (337)
5 3flk_A Tartrate dehydrogenase/ 100.0 3E-107 1E-111 808.2 26.7 309 71-381 4-338 (364)
6 3ty4_A Probable homoisocitrate 100.0 8E-107 3E-111 804.5 28.8 307 70-380 8-340 (366)
7 3dms_A Isocitrate dehydrogenas 100.0 5E-107 2E-111 820.9 27.5 332 32-381 9-398 (427)
8 3u1h_A 3-isopropylmalate dehyd 100.0 2E-106 6E-111 805.5 28.8 306 72-380 23-349 (390)
9 2iv0_A Isocitrate dehydrogenas 100.0 4E-106 1E-110 811.3 29.6 327 37-381 6-382 (412)
10 2e0c_A 409AA long hypothetical 100.0 7E-106 2E-110 809.7 29.7 324 40-381 6-379 (409)
11 3vmk_A 3-isopropylmalate dehyd 100.0 1E-105 3E-110 798.7 28.9 310 69-381 10-343 (375)
12 3udu_A 3-isopropylmalate dehyd 100.0 7E-106 2E-110 796.5 27.4 305 72-380 6-330 (361)
13 2d1c_A Isocitrate dehydrogenas 100.0 4E-105 1E-109 813.5 33.0 306 72-381 19-329 (496)
14 2d4v_A Isocitrate dehydrogenas 100.0 4E-105 1E-109 807.2 30.9 327 37-381 5-401 (429)
15 1vlc_A 3-isopropylmalate dehyd 100.0 1E-105 4E-110 795.8 26.5 306 71-380 11-335 (366)
16 2y3z_A 3-isopropylmalate dehyd 100.0 4E-105 1E-109 791.2 28.3 305 72-380 3-325 (359)
17 1cnz_A IPMDH, IMDH, protein (3 100.0 5E-105 2E-109 792.5 27.9 307 71-380 3-333 (363)
18 3r8w_A 3-isopropylmalate dehyd 100.0 6E-105 2E-109 798.6 26.8 307 71-380 41-370 (405)
19 1wpw_A 3-isopropylmalate dehyd 100.0 1E-104 4E-109 782.6 28.1 298 73-381 2-312 (336)
20 1tyo_A Isocitrate dehydrogenas 100.0 1E-104 5E-109 804.0 29.6 326 37-381 14-393 (435)
21 1a05_A IPMDH, IMDH, 3-isopropy 100.0 2E-104 8E-109 787.0 27.5 305 73-380 2-327 (358)
22 1hqs_A Isocitrate dehydrogenas 100.0 2E-104 8E-109 800.8 27.4 320 43-380 4-393 (423)
23 3us8_A Isocitrate dehydrogenas 100.0 2.2E-97 8E-102 750.7 24.4 305 72-381 30-392 (427)
24 2uxq_A Isocitrate dehydrogenas 100.0 2E-96 7E-101 741.0 23.3 305 72-380 6-366 (402)
25 1lwd_A Isocitrate dehydrogenas 100.0 9.4E-95 3.2E-99 731.0 22.7 306 72-381 8-371 (413)
26 1zor_A Isocitrate dehydrogenas 100.0 8.6E-94 2.9E-98 721.6 22.6 306 72-381 7-365 (399)
27 4aoy_A Isocitrate dehydrogenas 100.0 4.5E-93 1.5E-97 714.5 23.4 306 72-381 7-368 (402)
28 2qfy_A Isocitrate dehydrogenas 100.0 1.3E-91 4.3E-96 710.3 19.6 305 72-380 22-387 (427)
29 3blx_A Isocitrate dehydrogenas 97.3 5.8E-05 2E-09 74.5 1.5 62 37-98 11-73 (349)
30 3blx_B Isocitrate dehydrogenas 96.7 0.00012 4.3E-09 72.2 -2.2 61 37-98 15-80 (354)
31 3lxy_A 4-hydroxythreonine-4-ph 96.7 0.0096 3.3E-07 58.3 11.0 136 211-358 178-327 (334)
32 1wpw_A 3-isopropylmalate dehyd 96.4 0.00074 2.5E-08 66.3 1.4 55 43-97 1-64 (336)
33 3ty4_A Probable homoisocitrate 96.4 0.00031 1E-08 69.7 -1.4 56 42-97 9-73 (366)
34 1x0l_A Homoisocitrate dehydrog 96.4 0.00083 2.8E-08 65.8 1.6 55 43-97 1-60 (333)
35 2d1c_A Isocitrate dehydrogenas 96.3 0.0015 5E-08 67.0 2.6 57 41-97 17-79 (496)
36 2y3z_A 3-isopropylmalate dehyd 96.3 0.0012 3.9E-08 65.4 1.6 55 43-98 3-67 (359)
37 3vmk_A 3-isopropylmalate dehyd 96.2 0.00086 2.9E-08 66.7 0.5 30 41-70 11-40 (375)
38 1w0d_A 3-isopropylmalate dehyd 96.1 0.00081 2.8E-08 66.0 -0.6 36 44-81 2-37 (337)
39 3u1h_A 3-isopropylmalate dehyd 96.0 0.001 3.4E-08 66.5 -0.2 56 43-98 23-87 (390)
40 3r8w_A 3-isopropylmalate dehyd 95.9 0.0016 5.4E-08 65.4 0.7 56 42-98 41-106 (405)
41 3udu_A 3-isopropylmalate dehyd 95.9 0.0007 2.4E-08 67.0 -2.1 39 43-81 6-46 (361)
42 1cnz_A IPMDH, IMDH, protein (3 95.9 0.0017 5.8E-08 64.4 0.6 54 43-97 4-67 (363)
43 1a05_A IPMDH, IMDH, 3-isopropy 95.7 0.002 6.8E-08 63.7 0.4 54 44-98 2-65 (358)
44 3flk_A Tartrate dehydrogenase/ 95.7 0.00098 3.4E-08 66.1 -2.0 28 43-70 5-32 (364)
45 2iv0_A Isocitrate dehydrogenas 95.6 0.0035 1.2E-07 63.1 1.6 29 42-70 26-54 (412)
46 3dms_A Isocitrate dehydrogenas 95.5 0.0045 1.5E-07 62.6 1.9 28 42-69 35-62 (427)
47 1itw_A Isocitrate dehydrogenas 95.4 0.29 9.9E-06 50.7 14.7 177 199-381 447-645 (741)
48 2b0t_A NADP isocitrate dehydro 95.4 0.29 9.9E-06 50.7 14.7 177 199-381 443-641 (738)
49 1vlc_A 3-isopropylmalate dehyd 95.0 0.0041 1.4E-07 61.6 0.0 55 43-98 12-76 (366)
50 2hi1_A 4-hydroxythreonine-4-ph 95.0 0.025 8.7E-07 55.2 5.5 136 211-358 180-328 (330)
51 2e0c_A 409AA long hypothetical 95.0 0.003 1E-07 63.6 -1.1 56 42-98 23-91 (409)
52 1tyo_A Isocitrate dehydrogenas 94.9 0.0031 1.1E-07 63.8 -1.1 56 42-98 34-102 (435)
53 2d4v_A Isocitrate dehydrogenas 94.9 0.0033 1.1E-07 63.5 -1.1 28 42-69 25-52 (429)
54 3us8_A Isocitrate dehydrogenas 94.8 0.0051 1.7E-07 62.2 0.0 56 43-98 30-90 (427)
55 1hqs_A Isocitrate dehydrogenas 94.4 0.0049 1.7E-07 62.2 -1.1 56 42-98 18-86 (423)
56 2uxq_A Isocitrate dehydrogenas 93.5 0.011 3.8E-07 59.3 -0.5 56 43-98 6-66 (402)
57 4aty_A Terephthalate 1,2-CIS-d 93.2 0.047 1.6E-06 53.6 3.4 133 211-358 195-340 (349)
58 1yxo_A 4-hydroxythreonine-4-ph 93.0 0.05 1.7E-06 53.1 3.2 136 211-358 173-322 (328)
59 1zor_A Isocitrate dehydrogenas 92.4 0.021 7.2E-07 57.2 -0.4 55 44-98 8-67 (399)
60 1lwd_A Isocitrate dehydrogenas 92.0 0.024 8.1E-07 57.1 -0.6 55 44-98 9-68 (413)
61 3tsn_A 4-hydroxythreonine-4-ph 91.5 0.11 3.7E-06 51.4 3.5 79 271-358 281-362 (367)
62 4aoy_A Isocitrate dehydrogenas 89.2 0.064 2.2E-06 53.7 -0.4 55 44-98 8-67 (402)
63 1vi1_A Fatty acid/phospholipid 83.0 7.3 0.00025 37.8 10.6 146 213-373 148-328 (345)
64 2qfy_A Isocitrate dehydrogenas 80.0 0.26 9E-06 49.7 -0.9 56 43-98 22-82 (427)
65 2af4_C Phosphate acetyltransfe 73.3 12 0.00039 36.1 8.7 99 212-310 177-290 (333)
66 1r5j_A Putative phosphotransac 72.0 29 0.001 33.2 11.3 100 212-311 182-295 (337)
67 1vmi_A Putative phosphate acet 70.8 9.9 0.00034 37.0 7.6 97 213-310 185-297 (355)
68 1td9_A Phosphate acetyltransfe 67.5 19 0.00064 34.5 8.7 100 212-311 178-291 (329)
69 1yco_A Branched-chain phosphot 64.0 55 0.0019 30.6 11.1 95 214-311 126-237 (279)
70 1u7n_A Fatty acid/phospholipid 63.5 37 0.0013 32.6 10.0 145 214-373 151-331 (336)
71 1e2b_A Enzyme IIB-cellobiose; 63.3 25 0.00087 27.9 7.4 69 72-161 3-72 (106)
72 3l49_A ABC sugar (ribose) tran 60.2 19 0.00064 32.2 6.9 73 223-296 112-200 (291)
73 3cis_A Uncharacterized protein 52.2 1.4E+02 0.0047 27.1 18.9 94 121-242 114-207 (309)
74 3ksm_A ABC-type sugar transpor 51.2 31 0.0011 30.3 6.7 81 215-296 108-196 (276)
75 3uf6_A LMO1369 protein; struct 50.6 95 0.0032 29.2 10.2 202 72-310 18-252 (291)
76 3nbm_A PTS system, lactose-spe 46.7 41 0.0014 27.0 6.1 58 70-138 4-62 (108)
77 2rjo_A Twin-arginine transloca 44.8 79 0.0027 28.9 8.7 73 223-296 123-206 (332)
78 4aty_A Terephthalate 1,2-CIS-d 43.9 13 0.00044 36.2 3.0 22 71-92 7-30 (349)
79 2fn9_A Ribose ABC transporter, 41.8 91 0.0031 27.6 8.4 80 214-295 107-199 (290)
80 1tvm_A PTS system, galactitol- 38.6 1.4E+02 0.0049 23.5 8.2 60 68-138 17-78 (113)
81 3l6u_A ABC-type sugar transpor 38.4 71 0.0024 28.3 7.0 82 214-296 112-204 (293)
82 3o74_A Fructose transport syst 37.7 98 0.0034 26.9 7.8 73 221-295 107-188 (272)
83 3miz_A Putative transcriptiona 36.7 1.1E+02 0.0039 27.2 8.3 75 221-296 118-206 (301)
84 3kuu_A Phosphoribosylaminoimid 35.6 1.3E+02 0.0043 26.4 7.8 69 65-140 5-78 (174)
85 3lxy_A 4-hydroxythreonine-4-ph 34.1 23 0.00079 34.3 3.1 21 71-91 7-29 (334)
86 4azs_A Methyltransferase WBDD; 34.1 97 0.0033 31.5 8.0 65 225-298 81-145 (569)
87 2zqe_A MUTS2 protein; alpha/be 33.6 1.3E+02 0.0045 22.6 6.8 56 208-268 7-62 (83)
88 3k01_A Acarbose/maltose bindin 33.5 63 0.0022 30.5 6.1 60 234-295 27-92 (412)
89 2x7x_A Sensor protein; transfe 33.3 1.3E+02 0.0046 27.2 8.2 64 233-297 127-198 (325)
90 4e4r_A Phosphate acetyltransfe 33.0 1.5E+02 0.0051 28.3 8.7 98 214-311 177-292 (331)
91 3quf_A Extracellular solute-bi 32.2 1.2E+02 0.004 28.6 7.8 58 234-296 29-92 (414)
92 2fhp_A Methylase, putative; al 31.6 1.9E+02 0.0066 23.4 8.3 60 232-298 65-127 (187)
93 2q62_A ARSH; alpha/beta, flavo 31.2 2.1E+02 0.007 25.9 9.0 82 72-163 34-124 (247)
94 1tjy_A Sugar transport protein 30.7 2.5E+02 0.0084 25.3 9.6 64 232-296 126-198 (316)
95 3dlo_A Universal stress protei 30.4 55 0.0019 26.8 4.5 27 215-242 35-61 (155)
96 2hi1_A 4-hydroxythreonine-4-ph 30.4 30 0.001 33.5 3.2 17 75-91 9-27 (330)
97 3d8u_A PURR transcriptional re 29.8 2.1E+02 0.0073 24.7 8.7 73 222-295 108-189 (275)
98 1gud_A ALBP, D-allose-binding 28.8 1.3E+02 0.0046 26.6 7.3 60 234-295 133-201 (288)
99 4hc4_A Protein arginine N-meth 28.0 52 0.0018 32.1 4.5 52 230-294 102-156 (376)
100 3tsn_A 4-hydroxythreonine-4-ph 27.9 34 0.0012 33.6 3.1 19 73-91 5-25 (367)
101 1yxo_A 4-hydroxythreonine-4-ph 27.9 29 0.00098 33.6 2.5 18 74-91 4-23 (328)
102 2ioy_A Periplasmic sugar-bindi 27.7 1.9E+02 0.0064 25.5 8.0 70 224-295 111-191 (283)
103 3i3v_A Probable secreted solut 26.7 1.5E+02 0.0053 27.6 7.6 61 234-294 7-71 (405)
104 3jy6_A Transcriptional regulat 26.7 77 0.0026 28.0 5.1 75 221-296 110-190 (276)
105 2h3h_A Sugar ABC transporter, 26.6 2.5E+02 0.0084 25.1 8.7 62 233-296 122-191 (313)
106 3tb6_A Arabinose metabolism tr 26.4 1.3E+02 0.0046 26.3 6.7 62 73-140 16-82 (298)
107 2l2q_A PTS system, cellobiose- 25.9 1.4E+02 0.0048 23.3 6.0 55 72-137 4-59 (109)
108 3egc_A Putative ribose operon 25.2 2.6E+02 0.009 24.5 8.5 75 221-296 112-195 (291)
109 3u7r_A NADPH-dependent FMN red 24.1 1.6E+02 0.0054 25.6 6.6 79 73-162 3-92 (190)
110 3d02_A Putative LACI-type tran 24.1 1.7E+02 0.0057 25.9 7.0 73 222-295 113-197 (303)
111 3idf_A USP-like protein; unive 23.4 2.5E+02 0.0086 21.5 7.4 28 216-244 12-40 (138)
112 3bvr_A NOTI restriction endonu 23.4 18 0.0006 34.7 0.1 29 283-311 71-101 (383)
113 3c9h_A ABC transporter, substr 23.3 1E+02 0.0035 28.5 5.5 56 235-295 34-95 (355)
114 3gbv_A Putative LACI-family tr 23.3 3.3E+02 0.011 23.7 8.8 67 70-139 6-79 (304)
115 3rpe_A MDAB, modulator of drug 22.9 1.5E+02 0.0051 26.5 6.3 60 70-136 23-90 (218)
116 3brq_A HTH-type transcriptiona 22.7 2E+02 0.0067 25.2 7.1 72 222-295 127-208 (296)
117 3cfx_A UPF0100 protein MA_0280 22.5 1.7E+02 0.0059 26.3 6.8 47 251-297 17-65 (296)
118 3brs_A Periplasmic binding pro 22.4 2.2E+02 0.0076 24.8 7.4 74 222-296 117-199 (289)
119 3qd7_X Uncharacterized protein 22.1 2.7E+02 0.0093 23.0 7.3 63 207-269 49-112 (137)
120 3cs3_A Sugar-binding transcrip 21.5 4E+02 0.014 23.1 8.9 71 223-295 107-185 (277)
121 3cij_A UPF0100 protein AF_0094 21.4 1.9E+02 0.0066 26.0 6.9 46 251-296 17-64 (295)
122 2fzv_A Putative arsenical resi 21.3 3.3E+02 0.011 25.2 8.5 82 71-162 57-148 (279)
123 3k4h_A Putative transcriptiona 21.2 3.6E+02 0.012 23.4 8.6 74 222-296 119-201 (292)
124 3uor_A ABC transporter sugar b 21.1 1.4E+02 0.0047 28.8 6.1 58 234-295 29-91 (458)
125 3m9w_A D-xylose-binding peripl 20.8 4.4E+02 0.015 23.3 9.7 62 72-139 2-68 (313)
126 3k1y_A Oxidoreductase; structu 20.6 2.1E+02 0.0072 24.7 6.7 83 72-162 11-110 (191)
127 3czc_A RMPB; alpha/beta sandwi 20.3 2.9E+02 0.0098 21.5 6.8 55 72-137 18-75 (110)
128 3g1w_A Sugar ABC transporter; 20.2 2.3E+02 0.0077 25.1 7.0 73 223-297 114-197 (305)
129 3gv0_A Transcriptional regulat 20.2 2.1E+02 0.0073 25.2 6.8 73 221-295 114-196 (288)
130 3lp6_A Phosphoribosylaminoimid 20.1 2.7E+02 0.0092 24.3 7.0 62 72-140 7-73 (174)
No 1
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=100.00 E-value=8.7e-109 Score=810.75 Aligned_cols=305 Identities=35% Similarity=0.520 Sum_probs=294.1
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCCCccc
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSHTGEL 149 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~~~~~ 149 (381)
.++|++|||||||||||+++++||++++++|+|+++++|.+++++++. |++++++|+++|++||||+++|.++. ..+
T Consensus 1 ~~~I~vipGDGIGpEv~~~a~~vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~~-~~~ 79 (333)
T 1x0l_A 1 AYRICLIEGDGIGHEVIPAARRVLEATGLPLEFVEAEAGWETFERRGTSVPEETVEKILSCHATLFGAATSPTRKV-PGF 79 (333)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHTTTCCEEEEEECCSHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCCSSCC-TTC
T ss_pred CcEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecchHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCCCC-cCc
Confidence 379999999999999999999999999999999999999999887753 69999999999999999999998643 467
Q ss_pred chhhHHHHHhhcceeecEEeeecCCCCCCCCCccEEEeccCCCceeecccceeeCCeEeeeeeecHHHHHHHHHHHHHHH
Q psy9726 150 QTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAKFAFDYA 229 (381)
Q Consensus 150 ~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~Tr~~~eRiar~AFe~A 229 (381)
+|+|++|||+||||||+||||++| +++|++++|||||||||||+|+|.+++ .+++++++++||++++|||+|+||+||
T Consensus 80 ~s~~l~lR~~ldlyan~RP~~~~p-~~s~~~~vD~vivREnteg~Y~g~~~~-~~~~a~~~~~~T~~~~eRiar~AF~~A 157 (333)
T 1x0l_A 80 FGAIRYLRRRLDLYANVRPAKSRP-VPGSRPGVDLVIVRENTEGLYVEQERR-YLDVAIADAVISKKASERIGRAALRIA 157 (333)
T ss_dssp CCHHHHHHHHTTCCEEEEEEECCS-STTCCSSCEEEEEEECGGGTCCCCEEE-ETTEEEEEEEEEHHHHHHHHHHHHHHH
T ss_pred cChhHHHHHHcCCEEEEEEEeecc-CCCCCCCCCEEEEecCccceecccccc-CCCeEEEEEEecHHHHHHHHHHHHHHH
Confidence 899999999999999999999999 999999999999999999999999877 578999999999999999999999999
Q ss_pred HhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhc
Q psy9726 230 TKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLV 309 (381)
Q Consensus 230 ~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~ 309 (381)
++|+||+||++||+|||+.|||||+++|+|++++||||+++|++||+|+||||++|++||||||+|||||||||++|+++
T Consensus 158 ~~r~rkkvt~v~KaNvlk~t~glf~~~~~eva~eyp~I~~~~~~vD~~~m~lv~~P~~FDVivt~NlfGDIlSD~aa~l~ 237 (333)
T 1x0l_A 158 EGRPRKTLHIAHKANVLPLTQGLFLDTVKEVAKDFPLVNVQDIIVDNCAMQLVMRPERFDVIVTTNLLGDILSDLAAGLV 237 (333)
T ss_dssp HTSTTCEEEEEECTTTCTTHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHT
T ss_pred HhcCCCeEEEEecCccchhhhHHHHHHHHHHHHHCCCceEEEEEHHHHHHHHhhCcccceEEEEcCccchhHhHHHHhhc
Confidence 99988999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHcC
Q psy9726 310 GGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAG 380 (381)
Q Consensus 310 GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av~~~l~~G 380 (381)
||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++||.++|++|
T Consensus 238 GslGl~psanig~~~a~fEp~H-GSAPdiaGk~iANP~A~IlS~ammL~~lg~~~~A~~Ie~Av~~~l~~g 307 (333)
T 1x0l_A 238 GGLGLAPSGNIGDTTAVFEPVH-GSAPDIAGKGIANPTAAILSAAMMLDYLGEKEAAKRVEKAVDLVLERG 307 (333)
T ss_dssp TCSTTCEEEEECSSCEEEEESS-CCCGGGTTSSCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHS
T ss_pred CCcccceeeEECCCceEEeCCC-CChhhhcCCCCcCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999 999999999999999999999999999999999999999999999987
No 2
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=100.00 E-value=6.2e-108 Score=809.84 Aligned_cols=310 Identities=41% Similarity=0.683 Sum_probs=296.6
Q ss_pred ccCCCCceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCC
Q psy9726 66 QSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDY 143 (381)
Q Consensus 66 fsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~ 143 (381)
.+.++++++|++|||||||||||+++++||++++++|+|+++++|.++ ++++. |++++++|+++|++||||+++|.+
T Consensus 15 ~~~~~~~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~~~-~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~ 93 (354)
T 3blx_B 15 PNPSTGKYTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPIF-VNGLTTIPDPAVQSITKNLVALKGPLATPIG 93 (354)
T ss_dssp CCTTTSCEECBCCCCSTTHHHHHHHHHHHHHTTTCSEECCCCCCCCEE-ETTEEECCHHHHHHHHHHSEEEECCCCCC--
T ss_pred chhcCCceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEEechhh-hhhCCCCCHHHHHHHHHCCEEEECCccCCCC
Confidence 345778899999999999999999999999999999999999999998 88753 699999999999999999999975
Q ss_pred CCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCCCccEEEeccCCCceeecccceeeCCeEeeeeeecHHHHHHHHH
Q psy9726 144 SHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAK 223 (381)
Q Consensus 144 ~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~Tr~~~eRiar 223 (381)
.+++|+|++|||+||||+|+|||+++||+++|++++|||||||||||+|+|.+++..+++++++++||++++|||+|
T Consensus 94 ---~~~~s~~l~lR~~ldlyan~RP~~~~pg~~s~~~~vD~vivREnteg~Y~g~e~~~~~~~a~~~~~~T~~~~eRiar 170 (354)
T 3blx_B 94 ---KGHRSLNLTLRKTFGLFANVRPAKSIEGFKTTYENVDLVLIRENTEGEYSGIEHIVCPGVVQSIKLITRDASERVIR 170 (354)
T ss_dssp -----CCCHHHHHHHHHTEEEEEEEEECCTTCCCSSCSCEEEEEEECSSEEEEEEEEECSTTEEEEEEEEEHHHHHHHHH
T ss_pred ---ccccCchHHHHHHcCCEEEEEEecccCCCCCCCCCccEEEEecCcCCcccCCcccccCCEEEEEEEEcHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999998877778999999999999999999
Q ss_pred HHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCcc--EEEcCCcchhHH
Q psy9726 224 FAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFD--VMVMPNLYGNIV 301 (381)
Q Consensus 224 ~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fd--Vivt~Nl~GDIL 301 (381)
+||+||++|+||+||++||+|||+.|||||+++|+|++++||||+++|++||+|+||||++|++|| ||||+|||||||
T Consensus 171 ~AFe~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva~eypdI~~~~~~vD~~~m~lv~~P~~FD~~Vivt~NlfGDIl 250 (354)
T 3blx_B 171 YAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKELSKEYPDLTLETELIDNSVLKVVTNPSAYTDAVSVCPNLYGDIL 250 (354)
T ss_dssp HHHHHHHHTTCSEEEEEESCTTTCHHHHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGGTTEEEEECHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEECCcchHhHHHHHHHHHHHHHHHCCCceEEEEEHHHHHHHHhhChhhCCceEEEecCcccchh
Confidence 999999999889999999999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHhhhhh-cCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHcC
Q psy9726 302 DNLASGL-VGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAG 380 (381)
Q Consensus 302 SDlaa~l-~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av~~~l~~G 380 (381)
||++|++ +||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++||.++|++|
T Consensus 251 SD~aa~l~~GslGl~pSanig~~~a~fEp~H-GSAPdiAGk~iANP~A~IlS~ammL~~lg~~~~A~~Ie~Av~~~l~~g 329 (354)
T 3blx_B 251 SDLNSGLSAGSLGLTPSANIGHKISIFEAVH-GSAPDIAGQDKANPTALLLSSVMMLNHMGLTNHADQIQNAVLSTIASG 329 (354)
T ss_dssp HHHHHHHHTSSGGGCEEEEEESSCEEEEECS-CCCGGGTTTTCCCTHHHHHHHHHHHHHHTCHHHHHHHHHTHHHHHTSS
T ss_pred HHHHHhhccCCccccceeEECCCceEEecCC-CChhhhcCCCccCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcC
Confidence 9999999 99999999999999999999999 999999999999999999999999999999999999999999999988
No 3
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=100.00 E-value=1.6e-107 Score=805.62 Aligned_cols=309 Identities=52% Similarity=0.832 Sum_probs=293.0
Q ss_pred cCCCCceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCC
Q psy9726 67 SVPEGRTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYS 144 (381)
Q Consensus 67 sa~~~~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~ 144 (381)
+.++++++|++|||||||||||+++++||++++++|+|+++++|. +++. |++++++|+++|++||||+++|..
T Consensus 12 ~~~~~~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~----~~g~~lp~~tl~~~~~~da~l~Gav~~P~~- 86 (349)
T 3blx_A 12 KKYGGRFTVTLIPGDGVGKEITDSVRTIFEAENIPIDWETINIKQ----TDHKEGVYEAVESLKRNKIGLKGLWHTPAD- 86 (349)
T ss_dssp -CCCCCEEEEEEEESHHHHHHHHHHHHHHHHTTCSEEEEECCCSS----TTCHHHHHHHHHHHHHHSEEEEEECCSHHH-
T ss_pred cccCCceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecCc----ccCCcCcHHHHHHHHHCCEEEECCccCCCC-
Confidence 467888999999999999999999999999999999999999998 3443 699999999999999999999842
Q ss_pred CCcccchhhHHHHHhhcceeecEEeeecCCCCCCCCCccEEEeccCCCceeecccceeeCCeEeeeeeecHHHHHHHHHH
Q psy9726 145 HTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAKF 224 (381)
Q Consensus 145 ~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~Tr~~~eRiar~ 224 (381)
.++++|+|++|||+||||+|+|||+++||+++|++++|||||||||||+|+|.+++..+++++++++||++++|||+|+
T Consensus 87 -~~~~~s~~l~lR~~ldlyan~RP~~~~pg~~~~~~~vD~vivREnteg~Y~g~e~~~~~gva~~~~~~T~~~~eRiar~ 165 (349)
T 3blx_A 87 -QTGHGSLNVALRKQLDIYANVALFKSLKGVKTRIPDIDLIVIRENTEGEFSGLEHESVPGVVESLKVMTRPKTERIARF 165 (349)
T ss_dssp -HHTCHHHHHHHHHTSCEEEEEEEEECCTTCCCSSCSCEEEEEEECSSGGGGCEEEECSTTEEEEEEEEEHHHHHHHHHH
T ss_pred -CCCccCchHHHHHHcCCEEEEEEEeccCCCCCCCCCcCEEEEecCCCCcEeCCceeccCCeEEEEEEeCHHHHHHHHHH
Confidence 1356899999999999999999999999999999999999999999999999988777889999999999999999999
Q ss_pred HHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHH-hhCCCeEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHH
Q psy9726 225 AFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMA-KLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDN 303 (381)
Q Consensus 225 AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva-~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSD 303 (381)
||+||++|+||+||++||+|||+.|||||+++|+|++ ++||||+++|++||+|+||||++|++||||||+|||||||||
T Consensus 166 AF~~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva~~eyp~i~~~~~~vD~~~~qlv~~P~~FDVivt~NlfGDIlSD 245 (349)
T 3blx_A 166 AFDFAKKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEYPDIDVSSIIVDNASMQAVAKPHQFDVLVTPSMYGTILGN 245 (349)
T ss_dssp HHHHHHHTTCCEEEEEECTTTSTTHHHHHHHHHHHHHHHHCTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHH
T ss_pred HHHHHHhcCCCcEEEEeCCccchhhHHHHHHHHHHHHHhhCCCeeEEEeeHHHHHHHHhhCcccccEEEECCcchHHHHH
Confidence 9999999988999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHcCC
Q psy9726 304 LASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 304 laa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av~~~l~~G~ 381 (381)
++|+++||+||+||+|+|++.+||||+|+||||||||||+|||+|+|||++|||+|||+.++|++|++||.++|++|+
T Consensus 246 ~aa~l~GslGl~pSanig~~~a~fEpvH~GSAPdiAGk~iANP~A~IlS~ammL~~lg~~~~A~~Ie~Av~~~l~~G~ 323 (349)
T 3blx_A 246 IGAALIGGPGLVAGANFGRDYAVFEPGSRHVGLDIKGQNVANPTAMILSSTLMLNHLGLNEYATRISKAVHETIAEGK 323 (349)
T ss_dssp HHHHHHTCGGGCEEEEEESSCEEECCTTTTSCC--CCTTCSCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHSSS
T ss_pred HHHhhcCCcccceEEEECCCceeEcCCCCCchhhhcCCCCCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999989999999999999999999999999999999999999999999999983
No 4
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=100.00 E-value=2.4e-107 Score=802.23 Aligned_cols=306 Identities=28% Similarity=0.461 Sum_probs=289.7
Q ss_pred eEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCCCcccc
Q psy9726 73 TKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSHTGELQ 150 (381)
Q Consensus 73 ~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~~~~~~ 150 (381)
++|++|||||||||||+++++||++++.+|+|+++++|.+++++++. |++|+++|+++|++||||+++|..+....++
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~~P~~~~~~~~~ 81 (337)
T 1w0d_A 2 SKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPSGVLER 81 (337)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHSTTCEEEECCCSHHHHHHHSCSSCHHHHHHHTTSSEEEEEECCCTTSCTTHHHH
T ss_pred cEEEEeCCCCcCHHHHHHHHHHHHHhcCCcEEEEEecchHHHhhhCCcCCHHHHHHHHHCCEEEECCccCCCCCCccccc
Confidence 68999999999999999999999999778999999999999988754 6999999999999999999999642212357
Q ss_pred hhhHHHHHhhcceeecEEeeecCCCCCCCCC---ccEEEeccCCCceeecccceee----CCeEeeeeeecHHHHHHHHH
Q psy9726 151 TLNMKLRKALDLYANVVHVKSLPGVKVRHSN---VDCVIIREQTEGEYSALEHECV----PGVVECLKIVTAEKSRRIAK 223 (381)
Q Consensus 151 s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~---iDivIvREnteG~Y~g~e~~~~----~~va~~~~~~Tr~~~eRiar 223 (381)
|+|++|||+||||||+||||++||+++|+++ +|||||||||||+|+|.+++.. +++++++++||++++|||+|
T Consensus 82 s~~l~lR~~ldlyan~RP~~~~pg~~s~l~~~~~~DivivREnteg~Y~g~e~~~~~g~~~~~a~~~~~~T~~~~eRiar 161 (337)
T 1w0d_A 82 GLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIRVGTPNEVATEVSVNTAFGVRRVVA 161 (337)
T ss_dssp HTHHHHHHHTTCCEEEEEEECCTTCCCSBTTCCCCEEEEEEECSCSGGGCCEEEESTTSTTCEEEEEEEEEHHHHHHHHH
T ss_pred chHHHHHHHcCCEEEEEEeecCCCCCCcccCCCCCcEEEEecCCCCeecCCcceecCCCCCCeEEEEEEEcHHHHHHHHH
Confidence 8999999999999999999999999999876 9999999999999999987752 35899999999999999999
Q ss_pred HHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHH
Q psy9726 224 FAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDN 303 (381)
Q Consensus 224 ~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSD 303 (381)
+||+||++| ||+||+|||+|||+.|||||+++|+|++++||||+++|++||+|+||||++|++||||||+|||||||||
T Consensus 162 ~AFe~A~~r-rkkVt~v~KaNvlk~s~glf~~~~~eva~eyp~i~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDIlSD 240 (337)
T 1w0d_A 162 DAFERARRR-RKHLTLVHKTNVLTFAGGLWLRTVDEVGECYPDVEVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITD 240 (337)
T ss_dssp HHHHHHHHT-TSEEEEEECTTTSHHHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHH
T ss_pred HHHHHHHHc-CCeEEEEECCccchhhhHHHHHHHHHHHHHCCceEEEEEEHHHHHHHHhhCcccccEEEECcchhHHHHH
Confidence 999999998 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcCCcccccccccCC---CccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHcC
Q psy9726 304 LASGLVGGAGVVAGASWSP---ECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAG 380 (381)
Q Consensus 304 laa~l~GslGl~psanig~---~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av~~~l~~G 380 (381)
++|+++||+||+||+|+|+ +++||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++||.++|++|
T Consensus 241 ~aa~l~GslGl~psanig~~~~~~a~fEp~H-GSAPdiAGk~iANP~A~IlS~ammL~~lg~~~~A~~Ie~Av~~~l~~g 319 (337)
T 1w0d_A 241 LAAAVCGGIGLAASGNIDATRANPSMFEPVH-GSAPDIAGQGIADPTAAIMSVALLLSHLGEHDAAARVDRAVEAHLATR 319 (337)
T ss_dssp HHHHHTTCGGGCEEEEECTTCSSCEEEEESS-CCCGGGTTSSCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHhhhcCCcccCceeEeCCCCCCceEEecCC-CChhhhCCCCCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999998 568999999 999999999999999999999999999999999999999999999876
No 5
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=100.00 E-value=3e-107 Score=808.17 Aligned_cols=309 Identities=31% Similarity=0.489 Sum_probs=291.0
Q ss_pred CceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEeccc-ccCCCCCC--hHHHHHHHHhcCcEEEecccCCCC
Q psy9726 71 GRTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSE-VNPTMSAP--LETVADSIARNGICLKGVLSTPDY 143 (381)
Q Consensus 71 ~~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~-~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~ 143 (381)
.+|+|++|||||||||||+++++||+++ +++|+|+++++|. +++++++. |++++++|+++|++||||+++|.|
T Consensus 4 ~~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~ 83 (364)
T 3flk_A 4 HSFRIAAIPGDGIGLEVLPEGIRVLEAAALKHGLALEFDTFEWASCDYYLQHGKMMPDDWAEQLKQYDAIYFGAVGWPDK 83 (364)
T ss_dssp -CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHSSSSCTTHHHHHTTSSEEEEEECCBTTT
T ss_pred CceEEEEECCCcccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCcHHHHhccCCcCCHHHHHHHHHCCEEEECCccCccc
Confidence 3689999999999999999999999985 7899999999999 78887643 699999999999999999999985
Q ss_pred CCCcc--cchhhHHHHHhhcceeecEEeeecCCCCCCC-----CCccEEEeccCCCceeecccceee----CCeEeeeee
Q psy9726 144 SHTGE--LQTLNMKLRKALDLYANVVHVKSLPGVKVRH-----SNVDCVIIREQTEGEYSALEHECV----PGVVECLKI 212 (381)
Q Consensus 144 ~~~~~--~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~-----~~iDivIvREnteG~Y~g~e~~~~----~~va~~~~~ 212 (381)
.+.. ++|+|++|||+||||||+||||++||+++|+ +++|||||||||||+|+|.+++.. +++++++++
T Consensus 84 -~~~~~~~~s~~l~LR~~ldlyanvRP~~~~pg~~splk~~~~~~vD~vivREnteG~Y~g~~~~~~~~~~~~~a~~~~~ 162 (364)
T 3flk_A 84 -VPDHISLWGSLLKFRREFDQYVNIRPVRLFPGVPCALANRKVGDIDFVVVRENTEGEYSSLGGIMFENTENEIVIQESI 162 (364)
T ss_dssp -BCHHHHHHTTHHHHHHHTTCCEEEEEEECCTTCCCSBTTCCTTSSEEEEEEECSSBTCCCCEEEESTTSTTCEEEEEEE
T ss_pred -CCCCcCcccchHHHHHHhCCeEEEEEEeccCCcccccccccCCCCCEEEEeeCCCceecCcCceeccCCCCCEEEEEEE
Confidence 1122 3789999999999999999999999999987 579999999999999999987653 679999999
Q ss_pred ecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEE
Q psy9726 213 VTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 213 ~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdViv 292 (381)
|||+++|||+|+||+||++|++|+||+|||+|||+.|+|||+++|+||+++||||+++|++||+|+||||++|++|||||
T Consensus 163 ~T~~~~eRIar~AFe~A~~r~~kkVt~v~KaNvlk~s~glf~~~~~eva~eypdv~~~~~~vD~~am~lv~~P~~FDViv 242 (364)
T 3flk_A 163 FTRRGVDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAMAAHYPHVSWDKQHIDILCARFVLQPERFDVVV 242 (364)
T ss_dssp EEHHHHHHHHHHHHHHHHHSSSCEEEEEECTTTSTTHHHHHHHHHHHHHTTCTTCEEEEEEHHHHHHHHHHCGGGCSEEE
T ss_pred ECHHHHHHHHHHHHHHHHhcCCCeEEEEECcchhhhHHHHHHHHHHHHHHHCCCceEEeeEHHHHHHHHHhCcccCcEEE
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHHhhhhhcCCcccccccccCCCc---cccccCCcCccccccCCCccChhHHHHHHHHHHhhcC-----chH
Q psy9726 293 MPNLYGNIVDNLASGLVGGAGVVAGASWSPEC---VVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVN-----LQY 364 (381)
Q Consensus 293 t~Nl~GDILSDlaa~l~GslGl~psanig~~~---a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg-----~~~ 364 (381)
|+|||||||||++|+++||+||+||+|+|++. +||||+| ||||||||||+|||+|+|||++|||+||| +.+
T Consensus 243 t~NlfGDILSD~aa~l~GslGl~pSanig~~~~~~a~fEp~H-GSAPdiAGk~iANP~A~IlS~ammL~~lg~~~~~~~~ 321 (364)
T 3flk_A 243 ASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSLFEPVH-GSAPDIFGKNIANPIAMIWSGALMLEFLGQGDERYQR 321 (364)
T ss_dssp ECHHHHHHHHHHHHHHTTCSTTCEEEEECTTCSSCEEEEESS-CCCTTTTTSSCCCCHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ecccchHHHHHHHHHhcCCcccccccccCCCCCcceEEecCC-CCchhhcCCCccCcHHHHHHHHHHHHHhCcccchhHH
Confidence 99999999999999999999999999999865 9999999 99999999999999999999999999999 999
Q ss_pred HHHHHHHHHHHHHHcCC
Q psy9726 365 YGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 365 ~A~~i~~Av~~~l~~G~ 381 (381)
+|++|++||.++|++|+
T Consensus 322 ~A~~Ie~Av~~~l~~G~ 338 (364)
T 3flk_A 322 AHDDMLNAIERVIADGS 338 (364)
T ss_dssp HHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999999874
No 6
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=100.00 E-value=7.6e-107 Score=804.49 Aligned_cols=307 Identities=32% Similarity=0.480 Sum_probs=290.2
Q ss_pred CCceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHh-cCcEEEecccCCC
Q psy9726 70 EGRTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIAR-NGICLKGVLSTPD 142 (381)
Q Consensus 70 ~~~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~-~daiL~G~v~~p~ 142 (381)
.++++|++|||||||||||+++++||+++ +++|+|+++++|.+++++++. |++++++|++ +|++||||+++|.
T Consensus 8 ~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~~da~L~Gavg~P~ 87 (366)
T 3ty4_A 8 TRRIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPT 87 (366)
T ss_dssp -CEEEEEEEEESTTHHHHHHHHHHHHHTCCGGGCCEEEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCSEEEEEECCCCS
T ss_pred CCceEEEEECCCccCHHHHHHHHHHHHHHHHhcCCceEEEEecchHHHHHhhCCCCCHHHHHHHHHhCCEEEECCccCCC
Confidence 45799999999999999999999999986 678999999999999887753 6999999999 5999999999998
Q ss_pred CCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCCCccEEEeccCCCceeeccccee----eCCeEeeeeeecHHHH
Q psy9726 143 YSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHEC----VPGVVECLKIVTAEKS 218 (381)
Q Consensus 143 ~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~iDivIvREnteG~Y~g~e~~~----~~~va~~~~~~Tr~~~ 218 (381)
++. .+++|+|++|||+||||||+||||++||+. ..++|||||||||||+|+|.+++. .+++++++++|||+++
T Consensus 88 ~~~-~~~~s~~l~LRk~ldlyaNvRP~~~~~g~~--~~~vD~vivREnTeG~Y~g~e~~~~~~~~~~~a~~~~~~Tr~~~ 164 (366)
T 3ty4_A 88 HKV-AGYSSPIVALRKKMGLYANVRPVKSLDGAK--GKPVDLVIVRENTECLYVKEERMVQNTPGKRVAEAIRRISEEAS 164 (366)
T ss_dssp SCC-TTCCCHHHHHHHHTTCCEEEEEEECCTTCS--SSCCEEEEEEECSCBGGGCCEEEEECCTTCCEEEEEEEEEHHHH
T ss_pred CCC-cccccchHHHHHHhCCeEEEEEEeccCCCC--CCCCcEEEEeeCCCCEeecCcceeccCCCCceEEEEEEecHHHH
Confidence 743 367899999999999999999999999984 247999999999999999999875 3579999999999999
Q ss_pred HHHHHHHHHHHHhC------------CCCcEEEEEcCCccccccHHHHHHHHHH---HhhCCCeEEeEEeHHHHHHHHHh
Q psy9726 219 RRIAKFAFDYATKN------------NRKKVTAVHKANIMKLGDGLFLNSCKEM---AKLYPKIQFEQMIVDNCTMQIVS 283 (381)
Q Consensus 219 eRiar~AFe~A~~r------------~~k~Vt~v~KaNv~~~tdglf~~~~~ev---a~eypdI~~~~~~vD~~~~~lv~ 283 (381)
|||+|+||+||++| +||+||+|||+|||+.|+|||+++|+|| +++||||+++|++||+|+||||+
T Consensus 165 eRIar~AFe~A~~r~~~~~~~~~~~~~rkkVt~v~KaNVl~~s~glf~~~~~ev~~~a~eypdV~~~~~~VD~~am~lv~ 244 (366)
T 3ty4_A 165 TKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESCRHAQSLDPSYASINVDEQIVDSMVYRLFR 244 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCSSCEEEEEECTTTCTTHHHHHHHHHHHHGGGCGGGTTSEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccccccccCCCCeEEEEECCcchHhHHHHHHHHHHHHHHhHhhCCCceEEeeeHHHHHHHHHh
Confidence 99999999999998 6899999999999999999999999999 89999999999999999999999
Q ss_pred CCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCch
Q psy9726 284 NPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQ 363 (381)
Q Consensus 284 ~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~ 363 (381)
+|++||||||+|||||||||++|+++||+||+||+|+|++++||||+| ||||||||||+|||+|+|||++|||+|||+.
T Consensus 245 ~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~a~fEpvH-GSAPdIaGk~iANP~A~IlS~amML~~lg~~ 323 (366)
T 3ty4_A 245 EPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDNFVMSEPVH-GSAPDIAGRGIANPVATFRSVALMLEFMGHQ 323 (366)
T ss_dssp CGGGCSEEEECHHHHHHHHHHHHGGGSCGGGCCCEEECSSCEEECCSS-CCCTTTTTSSCCCCHHHHHHHHHHHHHTTCH
T ss_pred CcccCcEEEECccchHHHHHHHHHhcCchhhhcceeeCCCceEEecCC-CChhhcCCCCccCcHHHHHHHHHHHHHCCCH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcC
Q psy9726 364 YYGDMIRNAVNRVLKAG 380 (381)
Q Consensus 364 ~~A~~i~~Av~~~l~~G 380 (381)
++|++|++||.++|++|
T Consensus 324 ~~A~~Ie~Av~~~l~~G 340 (366)
T 3ty4_A 324 DAAADIYTAVDKVLTEG 340 (366)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999999998
No 7
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=100.00 E-value=5.4e-107 Score=820.87 Aligned_cols=332 Identities=29% Similarity=0.420 Sum_probs=305.0
Q ss_pred ccccccccCCCceEEEe-eCCCCCCcceeeeccccccCCCCceEEEEecCCCchhHHHHHHHHHHHHc-------CCCcc
Q psy9726 32 TAVIHQSVPEGRTKCTL-IPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAA-------NVPVD 103 (381)
Q Consensus 32 ~~~~~~~~~~~~~~vt~-~pg~gigpe~~~~~~~vfsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~-------~~~i~ 103 (381)
-+.+|.+.|....++|+ -.|.-+.|+ +++|++|||||||||||+++++||+++ +++|+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~vp~--------------~~~I~vipGDGIGpEV~~~a~~Vl~aa~~~~~~~~~~i~ 74 (427)
T 3dms_A 9 MPYQHIKVPEGGDKITVNKDFSLNVSD--------------QPIIPYIEGDGTGFDITPVMIKVVDAAVEKAYGGKKKIH 74 (427)
T ss_dssp --CCSCCCCTTSBCCEECTTSCEECCS--------------SBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCE
T ss_pred CcccccCCCCCCCeEEEcCCCcEeCCC--------------CCEEEEECCCcccHHHHHHHHHHHHHHHHHhcCCCCceE
Confidence 34566777787789998 567778887 899999999999999999999999985 27999
Q ss_pred eEEEecccccCCCC-C--C-hHHHHHHHHhcCcEEEecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCC
Q psy9726 104 FEPFFFSEVNPTMS-A--P-LETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRH 179 (381)
Q Consensus 104 ~~~~~~g~~~~~~~-~--~-~~etl~~i~~~daiL~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~ 179 (381)
|+++++|.++++++ . . |++|+++|+++|++||||+++|.+ .+++|+|++|||+||||||+||||++||++||+
T Consensus 75 ~~~~~~G~~a~~~~G~~~~lp~etl~~~k~~da~l~G~~~tP~~---~~~~s~~l~LRk~LdLyaNlRPv~~~pg~~spl 151 (427)
T 3dms_A 75 WMEIYAGEKATKVYGPDVWLPEETLQVLKEYVVSIKGPLTTPVG---GGIRSLNVALRQELDLYVCLRPIQYFKGVPSPV 151 (427)
T ss_dssp EEEECCTHHHHHHHCTTCSSCHHHHHHHHHTCEEEECCCCCCC-------CCHHHHHHHHTTCCEEEEEECCCTTCCCSS
T ss_pred EEEEeCCHHHHHhcCCCCCCCHHHHHHHHhcCEEEECCCCCCCC---cccCChhHHHHHHhCCeEEEEEeecCCCCCCCC
Confidence 99999999998775 3 3 699999999999999999999975 467899999999999999999999999999987
Q ss_pred ---CCccEEEeccCCCceeecccceee-----------------------CCeEeeeeeecHHHHHHHHHHHHHHHHhCC
Q psy9726 180 ---SNVDCVIIREQTEGEYSALEHECV-----------------------PGVVECLKIVTAEKSRRIAKFAFDYATKNN 233 (381)
Q Consensus 180 ---~~iDivIvREnteG~Y~g~e~~~~-----------------------~~va~~~~~~Tr~~~eRiar~AFe~A~~r~ 233 (381)
+++|||||||||||+|+|.|++.. +++++++++|||+++|||+|+||+||++|+
T Consensus 152 k~~~~vDivIvREnTeG~Y~G~e~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~Tr~~~eRIar~AFe~A~~r~ 231 (427)
T 3dms_A 152 REPEKTNMVIFRENSEDIYAGIEWAAESEQAKKVIKFLQEEMGVKKIRFPQTSGIGIKPVSKEGTERLVRKAIQYAIDND 231 (427)
T ss_dssp SCGGGCCEEEEEECSSGGGGCCEECTTCHHHHHHHHHHHHTSCCCCCSCGGGCCEECCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCceEEEEEECCCCEecCcccccCCcccccccccccccccccccccCCcceEEEEEecHHHHHHHHHHHHHHHHhcC
Confidence 479999999999999999986431 246889999999999999999999999998
Q ss_pred CCcEEEEEcCCccccccHHHHHHHHHHHh-hCCC-------------------eEEeEEeHHHHHHHHHhCCCCccEEEc
Q psy9726 234 RKKVTAVHKANIMKLGDGLFLNSCKEMAK-LYPK-------------------IQFEQMIVDNCTMQIVSNPHQFDVMVM 293 (381)
Q Consensus 234 ~k~Vt~v~KaNv~~~tdglf~~~~~eva~-eypd-------------------I~~~~~~vD~~~~~lv~~P~~fdVivt 293 (381)
||+||+|||+|||+.|||||+++|+||++ +||+ |+++|++||+||||||++|++||||||
T Consensus 232 rkkVT~V~KaNVlk~tdglfr~~~~eva~~eypdv~~~~~~~~~~~~~~~~~~V~~~~~~VD~~amqlv~~P~~FDViVt 311 (427)
T 3dms_A 232 RKSVTLVHKGNIMKFTEGAFRDAGYALAQKEFGAELIDGGPWMKFKNPKTGNEIVVKDSIADAFLQQILLRPAEYDVIAT 311 (427)
T ss_dssp CSEEEEEECTTTSTTTHHHHHHHHHHHHHHHHCCEESTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEE
T ss_pred CCeEEEEECCccchhhhHHHHHHHHHHHHHhCCccccccccccccccccccCceEEEEeeHHHHHHHHhhCcccceEEEE
Confidence 89999999999999999999999999996 7985 889999999999999999999999999
Q ss_pred CCcchhHHHHhhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHH
Q psy9726 294 PNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAV 373 (381)
Q Consensus 294 ~Nl~GDILSDlaa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av 373 (381)
+|||||||||++|+++||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++||
T Consensus 312 ~NlfGDILSD~aA~l~GslGl~pSanig~~~a~fEpvH-GSAPdIAGk~iANP~A~IlS~amML~~lg~~~~A~~Ie~AV 390 (427)
T 3dms_A 312 LNLNGDYISDALAAQVGGIGIAPGANLSDSVAMFEATH-GTAPKYAGKDYVNPGSEILSAEMMLRHLGWTEAADVIISAM 390 (427)
T ss_dssp CHHHHHHHHHHHHHHTTCTTTCEEEEECSSCEEEEECS-CCCGGGTTSSCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHhcCCccccceeeeCCCcceEEecc-CChhhhcCCCcCCcHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHcCC
Q psy9726 374 NRVLKAGK 381 (381)
Q Consensus 374 ~~~l~~G~ 381 (381)
.++|++|+
T Consensus 391 ~~vl~~G~ 398 (427)
T 3dms_A 391 EKSIKQKR 398 (427)
T ss_dssp HHHHHHTE
T ss_pred HHHHHcCC
Confidence 99999873
No 8
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=100.00 E-value=1.7e-106 Score=805.47 Aligned_cols=306 Identities=33% Similarity=0.493 Sum_probs=283.5
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~ 145 (381)
+++|++|||||||||||+++++||+++ +++|+|+++++|++++++++. |++++++|+++|++||||+++|.|+.
T Consensus 23 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~daiL~Gavg~P~~~~ 102 (390)
T 3u1h_A 23 KKKIAVLPGDGIGPEVMEAAIEVLKAVAERFGHEFEFEYGLIGGAAIDEAGTPLPEETLDVCRGSDAILLGAVGGPKWDQ 102 (390)
T ss_dssp -CEEEEEEESTTHHHHHHHHHHHHHHHHHHHSCCCEEEECCCTHHHHHSSSSSSCHHHHHHHHTSSEEEEEECCCSTTTS
T ss_pred cceEEEECCCccCHHHHHHHHHHHHHHHHhcCCCeEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCcCC
Confidence 489999999999999999999999997 899999999999999988754 69999999999999999999998743
Q ss_pred -C--cccchhhHHHHHhhcceeecEEeeecCCCC--CCC-----CCccEEEeccCCCceeecccceee---CCeEeeeee
Q psy9726 146 -T--GELQTLNMKLRKALDLYANVVHVKSLPGVK--VRH-----SNVDCVIIREQTEGEYSALEHECV---PGVVECLKI 212 (381)
Q Consensus 146 -~--~~~~s~~~~LR~~ldlyanvRPv~~~pg~~--~~~-----~~iDivIvREnteG~Y~g~e~~~~---~~va~~~~~ 212 (381)
+ ..++|.|++|||+||||||+||||++||++ ||+ +++|||||||||||+|+|.+++.. .++++++++
T Consensus 103 ~~~~~~~~~~ll~LRk~ldLyANvRP~k~~pg~~~~splk~~~~~~vD~vIVREnTeG~Y~g~~~~~~~~g~~~a~~~~~ 182 (390)
T 3u1h_A 103 NPSELRPEKGLLGIRKGLDLFANLRPVKVYDSLADASPLKKEVIEGVDLVIVRELTGGLYFGEPSERYEEGEEAAVDTLL 182 (390)
T ss_dssp SCCSSSSSCCHHHHHHHTTEEEEEEEEECCGGGTTSSSBCHHHHSSCEEEEEEECSSBSCC-------CTTCSEEEEEEE
T ss_pred CCcccCccchHHHHHHHhCCeEEEEEeeccCCccccCCcccccccCCcEEEEeeCCCCeecCccccccCCCCceEEEEEE
Confidence 1 234588999999999999999999999998 776 689999999999999999987752 357999999
Q ss_pred ecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEE
Q psy9726 213 VTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 213 ~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdViv 292 (381)
|||+++|||+|+||+||++| ||+||+|||+||| .||+||+++|+||+++||||+++|++||+||||||++|++|||||
T Consensus 183 ~Tr~~~eRIar~AFe~A~~r-rkkVT~v~KaNVl-~t~glfr~~~~eva~eYPdV~~~~~~VD~~amqLV~~P~~FDViV 260 (390)
T 3u1h_A 183 YTREEIERIIRKAFELALTR-KKKVTSVDKANVL-ESSRLWREVAEEVAKEYPDVELEHMLVDNAAMQLIRNPRQFDVIV 260 (390)
T ss_dssp EEHHHHHHHHHHHHHHHHTT-TSEEEEEECTTTC-HHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEE
T ss_pred ecHHHHhHHHHHHHHHHHHc-CCceEEEECCccc-ccchHHHHHHHHHHhHCCCCeEEeeeHHHHHHHHHhCcccCcEEE
Confidence 99999999999999999998 7899999999999 689999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHHhhhhhcCCcccccccccCCC-ccccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchHHHHHHH
Q psy9726 293 MPNLYGNIVDNLASGLVGGAGVVAGASWSPE-CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYYGDMIR 370 (381)
Q Consensus 293 t~Nl~GDILSDlaa~l~GslGl~psanig~~-~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~~A~~i~ 370 (381)
|+|||||||||++|+++||+||+||+|+|++ ++||||+| ||||||||||+|||+|+|||++|||+| ||+.++|++|+
T Consensus 261 t~NlfGDILSD~aA~l~GslGl~pSanig~~~~a~fEpvH-GSAPDIAGk~iANP~A~IlS~amML~~~lg~~~~A~~Ie 339 (390)
T 3u1h_A 261 TENMFGDILSDEASMITGSLGMLPSASLSTDGLGLYEPVH-GSAPDIAGKGIANPLATILSAAMMLRYSFGLEEEAKAIE 339 (390)
T ss_dssp ECHHHHHHHHHHHHHHHSCTTTCEEEEEETTSCEEEEESS-CCCTTTTTSSCSCTHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred ecccchHHHHHHHHHhcCchhhcceeeecCCCCeeEecCC-CChhhhcCCCcCCcHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 9999999999999999999999999999984 89999999 999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHcC
Q psy9726 371 NAVNRVLKAG 380 (381)
Q Consensus 371 ~Av~~~l~~G 380 (381)
+||.++|++|
T Consensus 340 ~AV~~vl~~G 349 (390)
T 3u1h_A 340 KAVEKVLAEG 349 (390)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHcC
Confidence 9999999987
No 9
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=100.00 E-value=4.1e-106 Score=811.26 Aligned_cols=327 Identities=32% Similarity=0.466 Sum_probs=306.8
Q ss_pred cccCCCceEEEeeCCCCCCcceeeeccccccCCCCceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccc
Q psy9726 37 QSVPEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEV 112 (381)
Q Consensus 37 ~~~~~~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~ 112 (381)
.+.|....++|+..|.-++|+ +++|++|||||||||||+++++||+++ +++|+|+++++|.+
T Consensus 6 ~~~~~~~~~i~~~~~~~~vp~--------------~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~ 71 (412)
T 2iv0_A 6 VKPPENGEKIRYENGKLIVPD--------------NPIIPYFEGDGIGKDVVPAAIRVLDAAADKIGKEVVWFQVYAGED 71 (412)
T ss_dssp CCCCSSCBCCEEETTEEECCS--------------SBEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSHH
T ss_pred ccCCCCCCeEEecCCeEeCCC--------------CCEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHH
Confidence 334555678888877777886 789999999999999999999999998 89999999999999
Q ss_pred cCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCC---CccEEEe
Q psy9726 113 NPTMSAP--LETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS---NVDCVII 187 (381)
Q Consensus 113 ~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~---~iDivIv 187 (381)
++++++. |++|+++|+++|++||||+++|.+ ++++|+|++|||+||||||+|||+++||+++|++ ++|||||
T Consensus 72 ~~~~~G~~lp~etl~~~k~~da~LkGav~tP~~---~~~~s~~l~LR~~Ldlyan~RPv~~~~g~~splk~~~~vDivIv 148 (412)
T 2iv0_A 72 AYKLYGNYLPDDTLNAIKEFRVALKGPLTTPVG---GGYRSLNVTIRQVLDLYANVRPVYYLKGVPSPIKHPEKVNFVIF 148 (412)
T ss_dssp HHHHHSCSSCHHHHHHHHHHCEEEECCCCCCSS---SSSSHHHHHHHHHTTCCEEEEEEECCTTSCCSBSCGGGCEEEEE
T ss_pred HHHhhCCcCCHHHHHHHHHCCEEEECCccCCCC---ccccChhHHHHHHcCCeEEEEEEEecCCCCCCCCCcCCCCEEEE
Confidence 9988754 699999999999999999999964 4678999999999999999999999999999885 6999999
Q ss_pred ccCCCceeeccccee--------------------eCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccc
Q psy9726 188 REQTEGEYSALEHEC--------------------VPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMK 247 (381)
Q Consensus 188 REnteG~Y~g~e~~~--------------------~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~ 247 (381)
||||||+|+|.++.. .+++++++++||++++|||+|+||+||++|+||+||+|||+|||+
T Consensus 149 REnTeg~Y~G~e~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk 228 (412)
T 2iv0_A 149 RENTEDVYAGIEWPRGSEEALKLIRFLKNEFGVTIREDSGIGIKPISEFATKRLVRMAIRYAIENNRKSVTLVHKGNIMK 228 (412)
T ss_dssp EECSSSGGGCCEECTTCHHHHHHHHHHHHHHCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCT
T ss_pred ecCCCCEeCCcccccCCccccchhhcccccccccCCCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchh
Confidence 999999999998653 236899999999999999999999999999888999999999999
Q ss_pred cccHHHHHHHHHHHh-hCCC--------------------eEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhh
Q psy9726 248 LGDGLFLNSCKEMAK-LYPK--------------------IQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLAS 306 (381)
Q Consensus 248 ~tdglf~~~~~eva~-eypd--------------------I~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa 306 (381)
.|||||+++|+|+++ +||+ |+++|++||+|+||||++|++||||||+|||||||||++|
T Consensus 229 ~t~Glf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA 308 (412)
T 2iv0_A 229 YTEGAFRDWGYEVAKQEFGEYCITEDELWDKYGGKQPEGKIVVKDRIADNMFQQILTRTDEYDVIALPNLNGDYLSDAAA 308 (412)
T ss_dssp TTHHHHHHHHHHHHHHHSTTTEECHHHHHHHHTTCCCTTCEEEEEEEGGGHHHHHHHSGGGCCEEEECHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCCCccccccchhhhccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHH
Confidence 999999999999997 9999 9999999999999999999999999999999999999999
Q ss_pred hhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHcCC
Q psy9726 307 GLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 307 ~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av~~~l~~G~ 381 (381)
+++||+||+||+|+|++++||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++||.++|++|+
T Consensus 309 ~l~GslGlapsanig~~~a~fEp~H-GSAPdiAGk~iANP~A~IlS~amML~~lg~~~~A~~Ie~Av~~~l~~g~ 382 (412)
T 2iv0_A 309 ALIGGLGIAPGSNIGDGIGVFEPVH-GSAPKYAGQNKVNPTAEILTGALMFEYIGWKDASEMIKKAVEMTISSGI 382 (412)
T ss_dssp HHTTCGGGCEEEEEETTEEEEEESS-CCCSTTTTSSCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTE
T ss_pred HhcCCccccceEEECCCceEEeCCC-CChhhcCCCcccCcHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999 9999999999999999999999999999999999999999999999873
No 10
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=100.00 E-value=6.8e-106 Score=809.69 Aligned_cols=324 Identities=30% Similarity=0.481 Sum_probs=299.4
Q ss_pred CCCceEEEeeCCCCCCcceeeeccccccCCCCceEEEEecCCCchhHHHHHHHHHHHHc-------CCCcceEEEecccc
Q psy9726 40 PEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAA-------NVPVDFEPFFFSEV 112 (381)
Q Consensus 40 ~~~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~-------~~~i~~~~~~~g~~ 112 (381)
|....++|+..|.-+.|+ +++|++|||||||||||+++++||+++ +++|+|+++++|.+
T Consensus 6 ~~~~~~~~~~~~~~~vp~--------------~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~ 71 (409)
T 2e0c_A 6 PEDGEKIKFDKGKWIVPN--------------KPVILYIEGDGIGPEITNAAIKVINKAVERAYGSSREIKWLEVYAGEK 71 (409)
T ss_dssp CTTCBCCEESSSCEECCS--------------SBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHH
T ss_pred CCCCceEEecCCeEecCC--------------CceEeeCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEechHH
Confidence 445678888888777887 789999999999999999999999987 38999999999999
Q ss_pred cCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCC---CccEEEe
Q psy9726 113 NPTMSAP--LETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS---NVDCVII 187 (381)
Q Consensus 113 ~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~---~iDivIv 187 (381)
++++++. |++|+++|+++|++||||+++|.. ++++|+|++|||+||||||+|||+++||+++|++ ++|||||
T Consensus 72 ~~~~~g~~lp~etl~~~k~~da~LkGav~tP~~---~~~~s~~l~LR~~LdlyanvRPv~~~~g~~splk~~~~vDivIv 148 (409)
T 2e0c_A 72 AEKLVNDRFPKETQEMLLKYRVVLKGPLETPIG---KGWKSVNVAIRLMLDLYANIRPVKYIEGLESPLKHPEKVDMIIF 148 (409)
T ss_dssp HHHHHSCSSCHHHHHHHHHHCEEEECCCC-----------CHHHHHHHHTTCCEEEEEEECCTTCCCSBSCCTTCEEEEE
T ss_pred HHHhhCCcCCHHHHHHHHHCCEEEECCccCCCc---ccccChhHHHHHHcCCEEEEEEEeccCCCCCCCCCccCCcEEEE
Confidence 9988754 699999999999999999999964 4578999999999999999999999999999875 6999999
Q ss_pred ccCCCceeeccccee--------------------eCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccc
Q psy9726 188 REQTEGEYSALEHEC--------------------VPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMK 247 (381)
Q Consensus 188 REnteG~Y~g~e~~~--------------------~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~ 247 (381)
||||||+|+|.+++. .+++++++++||++++|||+|+||+||++|+||+||+|||+|||+
T Consensus 149 REnteg~Y~g~e~~~~~~~~~~v~~f~~~~~~~~~~~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk 228 (409)
T 2e0c_A 149 RENTDDLYRGIEYPFNSEEAKKIRDFLRKELKVEIEDDTGIGIKVMSKYKTQRITRLAIQYAIEHKRKKVTIMHKGNVMK 228 (409)
T ss_dssp EECSSGGGGCCEECTTSHHHHHHHHHHHHHSCCCCCSSEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTST
T ss_pred EcCCCCEeCCcccccCCCcccchhhccchhccccCCCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchh
Confidence 999999999998743 236899999999999999999999999999888999999999999
Q ss_pred cccHHHHHHHHHHHh-hCCC-----------------eEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhc
Q psy9726 248 LGDGLFLNSCKEMAK-LYPK-----------------IQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLV 309 (381)
Q Consensus 248 ~tdglf~~~~~eva~-eypd-----------------I~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~ 309 (381)
.|||||+++|+|+++ +||| |+++|++||+|+||||++|++||||||+|||||||||++|+++
T Consensus 229 ~sdglf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~ 308 (409)
T 2e0c_A 229 YTEGAFREWAYEVALKEYRDFIVTEEEINQGKPDQGKIILNDRIADNMFQQIIIRPEEYDIILAPNVNGDYISDAAGALI 308 (409)
T ss_dssp TTHHHHHHHHHHHHHHHSTTTEEEHHHHTTTCCCTTSEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHHHhCCCccccccccccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhc
Confidence 999999999999997 9999 9999999999999999999999999999999999999999999
Q ss_pred CCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHcCC
Q psy9726 310 GGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 310 GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av~~~l~~G~ 381 (381)
||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++||.++|++|+
T Consensus 309 GslGl~pSanig~~~a~fEp~H-GSAPdiAGk~iANP~A~IlS~ammL~~lg~~~~A~~Ie~Av~~~l~~g~ 379 (409)
T 2e0c_A 309 GNIGMLGGANIGDEGGMFEAIH-GTAPKYAGKNVANPTGIIKAGELMLRWMGWNEAADLIEKAINMAIRDKK 379 (409)
T ss_dssp SCGGGCEEEEEETTEEEEEESS-CCCGGGTTTTCSCTHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCcccCceEEECCCceEEecCC-CChhhhcCCcccCcHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999 9999999999999999999999999999999999999999999999884
No 11
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=100.00 E-value=9.9e-106 Score=798.71 Aligned_cols=310 Identities=28% Similarity=0.448 Sum_probs=288.2
Q ss_pred CCCceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCC
Q psy9726 69 PEGRTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPD 142 (381)
Q Consensus 69 ~~~~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~ 142 (381)
-+..|+|++|||||||||||+++++||+++ +++|+|+++++|.+++++++. |++|+++|+++|++||||+++|.
T Consensus 10 ~~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~etl~~~~~~da~L~Gavg~P~ 89 (375)
T 3vmk_A 10 HGSSYQIAVLAGDGIGPEVMAEARKVLAAVEKRFDLSIEYSEYDVGGAAIDNHGCPLPEATLKGCEAADAVLFGSVGGPK 89 (375)
T ss_dssp TTSCEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGG
T ss_pred CCCcceEEEECCCcccHHHHHHHHHHHHHHHHhcCCCEEEEEEECCHHHHHhhCCcCCHHHHHHHHHCCeEEECCcCCCC
Confidence 455799999999999999999999999986 689999999999999887653 69999999999999999999998
Q ss_pred CCCC-cc---cchhhHHHHHhhcceeecEEeeecCCCC--CCC------CCccEEEeccCCCceeeccccee----eCCe
Q psy9726 143 YSHT-GE---LQTLNMKLRKALDLYANVVHVKSLPGVK--VRH------SNVDCVIIREQTEGEYSALEHEC----VPGV 206 (381)
Q Consensus 143 ~~~~-~~---~~s~~~~LR~~ldlyanvRPv~~~pg~~--~~~------~~iDivIvREnteG~Y~g~e~~~----~~~v 206 (381)
|+.. .. ++++|++|||+||||||+||||++||++ +|+ +++|||||||||||+|+|.++.. .+++
T Consensus 90 ~~~~~~~~~~~~~~~l~LRk~ldLyaNvRP~~~~pg~~~~splk~~~~~~~vD~vIvREnTeG~Y~g~~~~~~~~~~~~~ 169 (375)
T 3vmk_A 90 WEHLPPNDQPERGALLPLRGHFELFCNMRPAKLHPGLEHMSPLRSDISEKGFDILCVRELTGGIYFGKPKGRQGEGENEE 169 (375)
T ss_dssp GTTSCSTTSHHHHHHHHHHHHTTCCEEEEEEECCTTCGGGSSBCHHHHTTCCEEEEEEECSSBTTTCSSCEEECCGGGCE
T ss_pred ccCCCccccccccchHHHHHHcCCeEEEEEEeccCCCcccCCCCcccccCCCCEEEEeeCCCCEecCCccccccCCCCce
Confidence 7431 12 2355899999999999999999999996 663 68999999999999999987754 2468
Q ss_pred EeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCC
Q psy9726 207 VECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPH 286 (381)
Q Consensus 207 a~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~ 286 (381)
++++++|||+++|||+|+||+||++| ||+||+|||+|||+. ++||+++|+||+++||||+++|++||+||||||++|+
T Consensus 170 a~~~~~~Tr~~~eRIar~AFe~A~~r-rkkVT~v~KaNvl~~-~glf~~~~~eva~eypdV~~~~~~VD~~am~lv~~P~ 247 (375)
T 3vmk_A 170 AFDTMRYSRKEIRRIAKIAFESAQGR-RKKVTSVDKANVLAC-SVLWREVVEEVAKDYPDVELEHIYIDNATMQLLRRPN 247 (375)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHHHHTT-TSEEEEEECTTTCHH-HHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGG
T ss_pred EEEEEEEcHHHHHHHHHHHHHHHHHc-CCcEEEEECchhhhh-hhHHHHHHHHHHHHCCCceEeeeeHHHHHHHHHhCcc
Confidence 99999999999999999999999998 789999999999995 5999999999999999999999999999999999999
Q ss_pred CccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCc-cccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchH
Q psy9726 287 QFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPEC-VVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQY 364 (381)
Q Consensus 287 ~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~-a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~ 364 (381)
+||||||+|||||||||++|+++||+||+||+|+|++. +||||+| ||||||||||+|||+|+|||++|||+| ||+.+
T Consensus 248 ~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~~a~fEpvH-GSAPdIAGk~iANP~A~IlS~amML~~~lg~~~ 326 (375)
T 3vmk_A 248 EFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQGFGMYEPAG-GSAPDIAGQGIANPVAQILSAALLLRHSLKLED 326 (375)
T ss_dssp GCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTSCEEEEESS-CCCTTTTTSSCSCCHHHHHHHHHHHHHTTCCHH
T ss_pred cCcEEEECchhHHHHHHHHHHhcCCccccceeeeCCCCceEEecCC-CCchhccCCCccCcHHHHHHHHHHHHHHCCCHH
Confidence 99999999999999999999999999999999999884 9999999 999999999999999999999999999 99999
Q ss_pred HHHHHHHHHHHHHHcCC
Q psy9726 365 YGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 365 ~A~~i~~Av~~~l~~G~ 381 (381)
+|++|++||.++|++|+
T Consensus 327 ~A~~Ie~AV~~~l~~G~ 343 (375)
T 3vmk_A 327 AALAIEAAVSKALSDGY 343 (375)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999999874
No 12
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=100.00 E-value=6.5e-106 Score=796.55 Aligned_cols=305 Identities=27% Similarity=0.396 Sum_probs=285.9
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~ 145 (381)
+|+|++|||||||||||+++++||+++ +++|+|+++++|++++++++. |++++++|+++|++||||+++|.|+.
T Consensus 6 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~Gavg~P~~~~ 85 (361)
T 3udu_A 6 TYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFELNEAKIGGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDN 85 (361)
T ss_dssp EEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTT
T ss_pred ceeEEEECCCccCHHHHHHHHHHHHHHHHhcCCCEEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCcEEECCcCCCCcCC
Confidence 589999999999999999999999986 789999999999999887643 69999999999999999999998753
Q ss_pred -Ccccc--hh-hHHHHHhhcceeecEEeeecCCCC--CC------CCCccEEEeccCCCceeecccceeeCCeEeeeeee
Q psy9726 146 -TGELQ--TL-NMKLRKALDLYANVVHVKSLPGVK--VR------HSNVDCVIIREQTEGEYSALEHECVPGVVECLKIV 213 (381)
Q Consensus 146 -~~~~~--s~-~~~LR~~ldlyanvRPv~~~pg~~--~~------~~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~ 213 (381)
+.+.+ +. |++|||+||||||+||||++||++ +| ++++|||||||||||+|+|.++.. +++++++++|
T Consensus 86 ~~~~~~~~~~~~l~LRk~ldLyaNvRP~~~~pg~~~~splk~~~~~~~vD~vivREnTeG~Y~g~~~~~-~~~a~~~~~~ 164 (361)
T 3udu_A 86 LPIDQRPERASLLPLRKHFNLFANLRPCKIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLG-KESAYDTEIY 164 (361)
T ss_dssp SCGGGSHHHHHHHHHHHHHTCCEEEEEEECCGGGGGGSSBCHHHHTTCCEEEEEEECSSGGGTSCEEEC-SSEEEEEEEE
T ss_pred CCCCcCccccchHHHHHHcCCEEEEEEeeccCCccccCCCccccccCCCcEEEEcccCCCeecCccCCc-CceEEEEEec
Confidence 22222 34 899999999999999999999996 66 468999999999999999987654 6789999999
Q ss_pred cHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEEc
Q psy9726 214 TAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVM 293 (381)
Q Consensus 214 Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt 293 (381)
||+++|||+|+||+||++| ||+||+|||+|||+ +++||+++|+||+++||||+++|++||+||||||++|++||||||
T Consensus 165 Tr~~~eRIar~AFe~A~~r-rkkVT~v~KaNvl~-t~glf~~~~~eva~eypdV~~~~~~VD~~am~lv~~P~~FDViVt 242 (361)
T 3udu_A 165 TKKEIERIARIAFESARIR-KKKVHLIDKANVLA-SSILWREVVANVAKDYQDINLEYMYVDNAAMQIVKNPSIFDVMLC 242 (361)
T ss_dssp EHHHHHHHHHHHHHHHHHT-TSEEEEEECTTTCH-HHHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCSEEEE
T ss_pred cHHHHHHHHHHHHHHHHHc-CCcEEEEECchhhc-cchHHHHHHHHHHHHCCCCeEEeeeHHHHHHHHHhCcccCcEEEe
Confidence 9999999999999999998 78999999999996 789999999999999999999999999999999999999999999
Q ss_pred CCcchhHHHHhhhhhcCCcccccccccCCC-ccccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchHHHHHHHH
Q psy9726 294 PNLYGNIVDNLASGLVGGAGVVAGASWSPE-CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYYGDMIRN 371 (381)
Q Consensus 294 ~Nl~GDILSDlaa~l~GslGl~psanig~~-~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~~A~~i~~ 371 (381)
+|||||||||++|+++||+||+||+|+|++ ++||||+| ||||||||||+|||+|+|||++|||+| ||+.++|++|++
T Consensus 243 ~NlfGDILSD~aa~l~GslGl~pSanig~~~~a~fEpvH-GSAPdIAGk~iANP~A~IlS~amML~~~lg~~~~A~~Ie~ 321 (361)
T 3udu_A 243 SNLFGDILSDELAAINGSLGLLSSASLNDKGFGLYEPAG-GSAPDIAHLNIANPIAQILSAALMLKYSFKEEQAAQDIEN 321 (361)
T ss_dssp CHHHHHHHHHHHHHHHCCGGGCEEEEECTTSCEEEEESS-CCCGGGTTSSCCCCHHHHHHHHHHHHHTSCCHHHHHHHHH
T ss_pred cchhHHHHHHHHHHhcCchhhcceeeeCCCCCeeeecCC-CChhhhcCCCccCCHHHHHHHHHHHHHhCCCHHHHHHHHH
Confidence 999999999999999999999999999986 69999999 999999999999999999999999999 999999999999
Q ss_pred HHHHHHHcC
Q psy9726 372 AVNRVLKAG 380 (381)
Q Consensus 372 Av~~~l~~G 380 (381)
||.++|++|
T Consensus 322 Av~~~l~~g 330 (361)
T 3udu_A 322 AISLALAQG 330 (361)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999987
No 13
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=3.6e-105 Score=813.51 Aligned_cols=306 Identities=36% Similarity=0.564 Sum_probs=297.0
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCC-C--hHHHHHHHHhcCcEEEecccCCCCCCCcc
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSA-P--LETVADSIARNGICLKGVLSTPDYSHTGE 148 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~-~--~~etl~~i~~~daiL~G~v~~p~~~~~~~ 148 (381)
+++|++|||||||||||+++++||++++++|+|+++++|.+++++++ . |++++++|+++|++||||+++|.+ .+
T Consensus 19 ~~~IavipGDGIGpEV~~~a~~VL~a~~~~ie~~~~~~G~~~~~~~G~~~lp~etle~ik~~daiLkGavgtP~~---~~ 95 (496)
T 2d1c_A 19 RKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVG---YG 95 (496)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCSHHHHTTTCTTSCCHHHHHHHHHHCEEEECCCCCCSS---SS
T ss_pred CEEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHhccCCCcCcHHHHHHHHHCCEEEECCccCCCc---cc
Confidence 68999999999999999999999999999999999999999998887 5 699999999999999999999975 45
Q ss_pred cchhhHHHHHhhcceeecEEeeecCCCCCCC--CCccEEEeccCCCceeecccceeeCCeEeeeeeecHHHHHHHHHHHH
Q psy9726 149 LQTLNMKLRKALDLYANVVHVKSLPGVKVRH--SNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAKFAF 226 (381)
Q Consensus 149 ~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~--~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~Tr~~~eRiar~AF 226 (381)
++|+|++||++||||||+||||++||+++|+ +++|||||||||||+|+|.+++..+++++++++||++++|||+|+||
T Consensus 96 ~~s~~l~LRk~LdLyaNlRP~k~~pgl~splk~~~vD~vIVREnTEG~Y~G~e~~~~~~va~~~~v~Tr~~ieRIar~AF 175 (496)
T 2d1c_A 96 EKSANVTLRKLFETYANVRPVREFPNVPTPYAGRGIDLVVVRENVEDLYAGIEHMQTPSVAQTLKLISWKGSEKIVRFAF 175 (496)
T ss_dssp SCCHHHHHHHHTTCCEEEEEEECBTTBCCTTTTSCCEEEEEEECSSBGGGCCEEEEETTEEEEEEEEEHHHHHHHHHHHH
T ss_pred ccChHHHHHHHhCCEEEEEEEeecCCCCccccCCCccEEEEeeCcCceEeceeEecCCCeEEEEEEecHHHHHHHHHHHH
Confidence 7899999999999999999999999999998 78999999999999999999887889999999999999999999999
Q ss_pred HHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhh
Q psy9726 227 DYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLAS 306 (381)
Q Consensus 227 e~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa 306 (381)
+||++|+||+||+|||+|||+.|||||+++|+|++++||||+++|++||+|+||||++|++||||||+|||||||||++|
T Consensus 176 e~A~~r~rkkVT~V~KaNVlk~sdGlfr~v~~eVa~eYPdI~~e~~~VD~~amqLV~~P~~FDVIVt~NLfGDILSDlaA 255 (496)
T 2d1c_A 176 ELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQVAQEYPDIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTS 255 (496)
T ss_dssp HHHHHTTCCEEEEEECTTTCTTHHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHH
T ss_pred HHHHhcCCCcEEEEECCCchhhHHHHHHHHHHHHHHHCCCceEEEEeHHHHHHHHhhCcCcceEEEECCcchHHHHHHHH
Confidence 99999988999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHcCC
Q psy9726 307 GLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 307 ~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av~~~l~~G~ 381 (381)
+++||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++||.++|++|+
T Consensus 256 ~l~GslGlapSanig~~~a~FEpvH-GSAPDIAGk~iANP~A~IlSaamML~hlG~~~~A~~Ie~AV~~vl~~G~ 329 (496)
T 2d1c_A 256 GLIGGLGFAPSANIGNEVAIFEAVH-GSAPKYAGKNVINPTAVLLSAVMMLRYLEEFATADLIENALLYTLEEGR 329 (496)
T ss_dssp TTTTCGGGCEEEEECSSCEEEEESS-CCCTTTTTSSCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTS
T ss_pred HhcCCcccCcEEEECCCCceeeCCC-CchhhhcCCCccCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999 9999999999999999999999999999999999999999999999983
No 14
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=100.00 E-value=3.7e-105 Score=807.23 Aligned_cols=327 Identities=28% Similarity=0.436 Sum_probs=305.6
Q ss_pred cccCCCceEEEeeCCCCCCcceeeeccccccCCCCceEEEEecCCCchhHHHHHHHHHHHHc-------CCCcceEEEec
Q psy9726 37 QSVPEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAA-------NVPVDFEPFFF 109 (381)
Q Consensus 37 ~~~~~~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~-------~~~i~~~~~~~ 109 (381)
.+.|....++|+..|.-+.|+ +++|++|||||||||||+++++||+++ +++|+|+++++
T Consensus 5 ~~~~~~~~~i~~~~~~~~vp~--------------~~~I~vipGDGIGpEV~~aa~~Vl~a~~~~~~~~~~~i~~~~~~~ 70 (429)
T 2d4v_A 5 IQKPATGSPLTLLNGVLQVPD--------------QPIIPFIEGDGIGCDVTPAMRSVVDAAVAKVYGGQRQIAWMELFA 70 (429)
T ss_dssp CCCCSSCBCCEEETTEEECCS--------------SBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECC
T ss_pred ccCCCCCCeEEecCCeEEcCC--------------CcEEEEECCCCCCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEee
Confidence 344555678888888777887 789999999999999999999999987 38999999999
Q ss_pred ccccCCCCC---C-hHHHHHHHHhcCcEEEecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCC---Cc
Q psy9726 110 SEVNPTMSA---P-LETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS---NV 182 (381)
Q Consensus 110 g~~~~~~~~---~-~~etl~~i~~~daiL~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~---~i 182 (381)
|.+++++++ . |++++++|+++|++||||+++|.. ++++|+|++|||+||||||+||||++||+++|++ ++
T Consensus 71 G~~~~~~~G~~~~lp~etl~~~k~~da~lkGav~tP~~---~~~~s~~l~LRk~LdLyanvRPv~~~~gv~splk~~~~v 147 (429)
T 2d4v_A 71 GQKAVQLYGEGQYLPDETMAAIREYKVAIKGPLETPVG---GGIRSLNVAMRQDLDLYVCLRPVRYFEGTPSPMRHPEKV 147 (429)
T ss_dssp THHHHHHHCTTCSSCHHHHHHHHHHCEEEECCCCCCSS---SSSCCHHHHHHHHTTCCEEEEEEECCTTCCCSBSCGGGC
T ss_pred ehhhhhccCCCCCCcHHHHHHHHHCCEEEECCccCCCc---ccccChhHHHHHHcCCEEEEEEEEecCCCCCCCCCcCCC
Confidence 999988763 3 699999999999999999999964 4678999999999999999999999999999875 69
Q ss_pred cEEEeccCCCceeeccccee-----------------------eCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEE
Q psy9726 183 DCVIIREQTEGEYSALEHEC-----------------------VPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTA 239 (381)
Q Consensus 183 DivIvREnteG~Y~g~e~~~-----------------------~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~ 239 (381)
|||||||||||+|+|.|++. .+++++++++||++++|||+|+||+||++|+||+||+
T Consensus 148 DivIvREnTeg~Y~G~e~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~ 227 (429)
T 2d4v_A 148 DMVIFRENSEDIYAGIEWPAGSPEAEKIIRFLREEMGVTKIRFPDSSAIGIKPVSTEGSERLIRRTIQYALEHGKPSVSL 227 (429)
T ss_dssp EEEEEEECSCGGGGCCEECTTCHHHHHHHHHHHHTSCCCCCSCGGGEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEEeCCCCeecCcccccCCcccccceeccccccccccccCCCceEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 99999999999999998653 2358899999999999999999999999998889999
Q ss_pred EEcCCccccccHHHHHHHHHHHh-hCCC--------------------------------eEEeEEeHHHHHHHHHhCCC
Q psy9726 240 VHKANIMKLGDGLFLNSCKEMAK-LYPK--------------------------------IQFEQMIVDNCTMQIVSNPH 286 (381)
Q Consensus 240 v~KaNv~~~tdglf~~~~~eva~-eypd--------------------------------I~~~~~~vD~~~~~lv~~P~ 286 (381)
|||+|||+.|||||+++|+|+++ +||+ |+++|++||+|+||||++|+
T Consensus 228 v~KaNVlk~tdGlf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~ 307 (429)
T 2d4v_A 228 VHKGNIMKFTEGGFRDWGYALAEREFAGRVFTWRQKAAISKAEGKAAGQKAEQQAIADGKLIIKDVIADNFLQQILLRPE 307 (429)
T ss_dssp EECTTTSTTTHHHHHHHHHHHHHHHSTTTEEEHHHHHHHHHHHCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGG
T ss_pred EECCccchhhhHHHHHHHHHHHHHhCCCccccccccccccccccccccchhccccccCCeeEEEEeeHHHHHHHHhhCcc
Confidence 99999999999999999999997 9999 99999999999999999999
Q ss_pred CccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHH
Q psy9726 287 QFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYG 366 (381)
Q Consensus 287 ~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A 366 (381)
+||||||+|||||||||++|+++||+||+||+|+|++++||||+| ||||||||||+|||+|+|||++|||+|||+.++|
T Consensus 308 ~fDVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~a~fEpvH-GSAPdiAGk~iANP~A~IlS~amML~hlg~~~~A 386 (429)
T 2d4v_A 308 DYSVVATLNLNGDYVSDALAAEVGGIGMAPGANLSDTHAIFEATH-GTAPDIAGQGKANPSSLILSAVMMLEHLGWGEAA 386 (429)
T ss_dssp GCCEEEECHHHHHHHHHHHHHHTTCGGGCCCEEECSSCEEEECSC-CCCTTTTTTTCCCCHHHHHHHHHHHHHTTCHHHH
T ss_pred cCcEEEECCcccHHHHHHHHHhcCCHhhcCeeEECCCceEEecCC-CChhHhcCCCCcCcHHHHHHHHHHHHHcCCHHHH
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCC
Q psy9726 367 DMIRNAVNRVLKAGK 381 (381)
Q Consensus 367 ~~i~~Av~~~l~~G~ 381 (381)
++|++||.++|++|+
T Consensus 387 ~~Ie~Av~~~l~~g~ 401 (429)
T 2d4v_A 387 QAIVAAMNATIAAGE 401 (429)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999999874
No 15
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=100.00 E-value=1.2e-105 Score=795.81 Aligned_cols=306 Identities=29% Similarity=0.429 Sum_probs=289.2
Q ss_pred CceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCC
Q psy9726 71 GRTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYS 144 (381)
Q Consensus 71 ~~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~ 144 (381)
...+|++|||||||||||+++++||+++ +++|+|+++++|.+++++++. |++|+++|+++|++||||+++|.++
T Consensus 11 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~~ 90 (366)
T 1vlc_A 11 HHMKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSVGGPKWD 90 (366)
T ss_dssp SEEEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGGT
T ss_pred cceEEEEeCCCCccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCccc
Confidence 4579999999999999999999999998 899999999999999988754 6999999999999999999999764
Q ss_pred C-Ccc--cchh-hHHHHHhhcceeecEEeeecCCCC--CCC------CCccEEEeccCCCceeecccceeeCCeEeeeee
Q psy9726 145 H-TGE--LQTL-NMKLRKALDLYANVVHVKSLPGVK--VRH------SNVDCVIIREQTEGEYSALEHECVPGVVECLKI 212 (381)
Q Consensus 145 ~-~~~--~~s~-~~~LR~~ldlyanvRPv~~~pg~~--~~~------~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~ 212 (381)
. +.. ..++ |++|||+||||||+||||++||++ ||+ +++|||||||||||+|+|.+++..+++++++++
T Consensus 91 ~~~~~~r~~~~~~l~LRk~ldlyaN~RP~~~~pgl~~~splk~~~~~~~vDivIvREnteG~Y~g~~~~~~~~~a~~~~~ 170 (366)
T 1vlc_A 91 DLPPEKRPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGLDEEKGFDTMI 170 (366)
T ss_dssp TSCSTTSHHHHTHHHHHHHTTCCEEEEEEECCGGGGGGSSSCHHHHTTCCEEEEEEECSSGGGTEEEEEECSSCEEEECC
T ss_pred cCCcccCcccchhHHHHHHhCCEEEEEEccccCCCCCcCCCcccccCCCceEEEEEeCCCCeecCCccccCCCeEEEEEE
Confidence 2 211 2355 999999999999999999999997 676 579999999999999999998777789999999
Q ss_pred ecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEE
Q psy9726 213 VTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 213 ~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdViv 292 (381)
|||+++|||+|+||+||++| ||+||+|||+|||+ |++||+++|+|++++||||+++|++||+|+||||++|++|||||
T Consensus 171 ~Tr~~~eRIar~AFe~A~~r-rkkVt~v~KaNvlk-t~glf~~~~~eva~eypdV~~~~~~VD~~~mqlv~~P~~FDViv 248 (366)
T 1vlc_A 171 YDRKTVERIARTAFEIAKNR-RKKVTSVDKANVLY-SSMLWRKVVNEVAREYPDVELTHIYVDNAAMQLILKPSQFDVIL 248 (366)
T ss_dssp CCHHHHHHHHHHHHHHHHTT-TSEEEEEECTTTCH-HHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEE
T ss_pred EcHHHHHHHHHHHHHHHHHc-CCeEEEEECCcccc-cchHHHHHHHHHHHHCCCceEEeeeHHHHHHHHhhCcccceEEE
Confidence 99999999999999999998 88999999999999 89999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHHhhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchHHHHHHHH
Q psy9726 293 MPNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYYGDMIRN 371 (381)
Q Consensus 293 t~Nl~GDILSDlaa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~~A~~i~~ 371 (381)
|+|||||||||++|+++||+||+||+|+| +.+||||+| ||||||||||+|||+|+|||++|||+| ||+.++|++|++
T Consensus 249 t~NlfGDILSD~aa~l~GslGl~pSanig-~~alfEpvH-GSAPdIAGk~iANP~A~IlS~ammL~~slg~~~~A~~Ie~ 326 (366)
T 1vlc_A 249 TTNMFGDILSDESAALPGSLGLLPSASFG-DKNLYEPAG-GSAPDIAGKNIANPIAQILSLAMMLEHSFGMVEEARKIER 326 (366)
T ss_dssp ECHHHHHHHHHHHTTSSSCGGGCEEEEES-SSEEEEESS-CCCTTTTTTTCSCCHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred EcchhHHHHHHHHHHhcCccccccEeeeC-CceeeecCC-CchhhcCCCCccCcHHHHHHHHHHHHHHcCChhHHHHHHH
Confidence 99999999999999999999999999999 889999999 999999999999999999999999999 999999999999
Q ss_pred HHHHHHHcC
Q psy9726 372 AVNRVLKAG 380 (381)
Q Consensus 372 Av~~~l~~G 380 (381)
||.++|++|
T Consensus 327 Av~~~l~~g 335 (366)
T 1vlc_A 327 AVELVIEEG 335 (366)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999987
No 16
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=100.00 E-value=3.8e-105 Score=791.25 Aligned_cols=305 Identities=30% Similarity=0.479 Sum_probs=286.9
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~ 145 (381)
+++|++|||||||||||+++++||+++ +++|+|+++++|.+++++++. |++++++|+++|++||||+++|.|+.
T Consensus 3 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~P~~~~ 82 (359)
T 2y3z_A 3 SMKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDG 82 (359)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEECCCCCGGGTT
T ss_pred ccEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCcccc
Confidence 489999999999999999999999997 789999999999999988754 69999999999999999999998643
Q ss_pred -C---cccchhhHHHHHhhcceeecEEeeecCCCC--CCC-----CCccEEEeccCCCceeecccceeeCCeEeeeeeec
Q psy9726 146 -T---GELQTLNMKLRKALDLYANVVHVKSLPGVK--VRH-----SNVDCVIIREQTEGEYSALEHECVPGVVECLKIVT 214 (381)
Q Consensus 146 -~---~~~~s~~~~LR~~ldlyanvRPv~~~pg~~--~~~-----~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~T 214 (381)
+ ..+++ |++|||+||||||+||||++||+. +|+ +++|||||||||||+|+|.++...+++++++++||
T Consensus 83 ~~~~~~~~~~-~l~LR~~ldlyanvRP~~~~pgl~~~splk~~~~~~iD~vivREnteg~Y~g~e~~~~~~~a~~~~~~T 161 (359)
T 2y3z_A 83 LPRKIRPETG-LLSLRKSQDLFANLRPAKVFPGLERLSPLKEEIARGVDVLIVRELTGGIYFGEPRGMSEAEAWNTERYS 161 (359)
T ss_dssp SCGGGCHHHH-HHHHHHHTTEEEEEEEEECCTTCGGGSSSCHHHHTTCEEEEEEECSCSTTTCSSCEECSSCEECCCCCC
T ss_pred CCcccccchh-HHHHHHHhCCEEEEEEeeccCCCCCCCCcccccCCCceEEEEecCccceEecCCCcCCCceEEEEEEEc
Confidence 1 12245 999999999999999999999984 665 47999999999999999998765567899999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEEcC
Q psy9726 215 AEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMP 294 (381)
Q Consensus 215 r~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt~ 294 (381)
|+++|||+|+||+||++| ||+||+|||+|||+ +++||+++|+||+++||||+++|++||+|+||||++|++||||||+
T Consensus 162 ~~~~eRIar~AFe~A~~r-rkkVt~v~KaNvlk-~~~lf~~~~~eva~eypdI~~~~~~VD~~~mqlv~~P~~FDVivt~ 239 (359)
T 2y3z_A 162 KPEVERVARVAFEAARKR-RKHVVSVDKANVLE-VGEFWRKTVEEVGRGYPDVALEHQYVDAMAMHLVRSPARFDVVVTG 239 (359)
T ss_dssp HHHHHHHHHHHHHHHHTT-TSEEEEEECTTTCH-HHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHHHHHc-CCeEEEEECCcccc-ccHHHHHHHHHHHHHCCcEEEEeeEHHHHHHHHhhCcccccEEEEc
Confidence 999999999999999998 78999999999999 7899999999999999999999999999999999999999999999
Q ss_pred CcchhHHHHhhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchHHHHHHHHHH
Q psy9726 295 NLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYYGDMIRNAV 373 (381)
Q Consensus 295 Nl~GDILSDlaa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~~A~~i~~Av 373 (381)
|||||||||++|+++||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+| ||+.++|++|++||
T Consensus 240 NlfGDILSD~aa~l~GslGl~pSanig~~~~~fEpvH-GSAPdiAGk~iANP~A~IlS~ammL~~slg~~~~A~~Ie~Av 318 (359)
T 2y3z_A 240 NIFGDILSDLASVLPGSLGLLPSASLGRGTPVFEPVH-GSAPDIAGKGIANPTAAILSAAMMLEHAFGLVELARKVEDAV 318 (359)
T ss_dssp HHHHHHHHHHHHTTTSCGGGCEEEEEESSCCEEEESS-CCCGGGTTSSCSCTHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHhcCcccccceeEeCCCCceeecCC-CChhhhCCCCCcCCHHHHHHHHHHHHHhcCChHHHHHHHHHH
Confidence 9999999999999999999999999999888999999 999999999999999999999999999 99999999999999
Q ss_pred HHHHHcC
Q psy9726 374 NRVLKAG 380 (381)
Q Consensus 374 ~~~l~~G 380 (381)
.++|++|
T Consensus 319 ~~~l~~g 325 (359)
T 2y3z_A 319 AKALLET 325 (359)
T ss_dssp HHHHHHS
T ss_pred HHHHHcC
Confidence 9999876
No 17
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=100.00 E-value=5.2e-105 Score=792.47 Aligned_cols=307 Identities=26% Similarity=0.448 Sum_probs=286.4
Q ss_pred CceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCC
Q psy9726 71 GRTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYS 144 (381)
Q Consensus 71 ~~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~ 144 (381)
.+++|++|||||||||||+++++||+++ +++|+|+++++|.+++++++. |++++++|+++|++||||+++|+|+
T Consensus 3 ~~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~p~~~ 82 (363)
T 1cnz_A 3 KNYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWE 82 (363)
T ss_dssp CCEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGT
T ss_pred CccEEEEeCCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCChHHHhhcCCcCcHHHHHHHHHCCEEEEccccCCccc
Confidence 4689999999999999999999999997 789999999999999988754 6999999999999999999999864
Q ss_pred C-Cc---ccchhhHHHHHhhcceeecEEeeecCCCC--CCC------CCccEEEeccCCCceeeccccee----eCCeEe
Q psy9726 145 H-TG---ELQTLNMKLRKALDLYANVVHVKSLPGVK--VRH------SNVDCVIIREQTEGEYSALEHEC----VPGVVE 208 (381)
Q Consensus 145 ~-~~---~~~s~~~~LR~~ldlyanvRPv~~~pg~~--~~~------~~iDivIvREnteG~Y~g~e~~~----~~~va~ 208 (381)
. +. ..+++|++|||+||||+|+||||++||+. ||+ +++|||||||||||+|+|.++.. .+++++
T Consensus 83 ~~~~~~~~e~~~~l~LR~~ldlyanvRP~~~~pgl~~~splk~~~~~~~vDivivREnteg~Y~g~~~~~~~~~~~~~a~ 162 (363)
T 1cnz_A 83 NLPPESQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEKAF 162 (363)
T ss_dssp TSCGGGSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEECCGGGCEEE
T ss_pred cCCcccCcccchHHHHHHHcCCEEEEEEEEecCCccCCCCCcccccCCCCCEEEEecccCCeecCCcCccccCCCCceEE
Confidence 3 11 23467999999999999999999999984 675 56999999999999999986432 235889
Q ss_pred eeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCc
Q psy9726 209 CLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQF 288 (381)
Q Consensus 209 ~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~f 288 (381)
++++||++++|||+|+||+||++| ||+||+|||+|||+ +++||+++|+|++++||||+++|++||+|+||||++|++|
T Consensus 163 ~~~~~T~~~~eRiar~AFe~A~~r-rkkVt~v~KaNvlk-~~~lf~~~~~eva~eypdI~~~~~~vD~~~m~lv~~P~~F 240 (363)
T 1cnz_A 163 DTEVYHRFEIERIARIAFESARKR-RRKVTSIDKANVLQ-SSILWREIVNDVAKTYPDVELAHMYIDNATMQLIKDPSQF 240 (363)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHTT-TSEEEEEECTTTCH-HHHHHHHHHHHHHTTCTTSEEEEEEHHHHHHHHHHCGGGC
T ss_pred EEEEEcHHHHHHHHHHHHHHHHhc-CCeEEEEECCcccc-cchhHHHHHHHHHHHCCCceEeeeeHHHHHHHHhhCcccc
Confidence 999999999999999999999998 78999999999999 7899999999999999999999999999999999999999
Q ss_pred cEEEcCCcchhHHHHhhhhhcCCcccccccccCCCc-cccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchHHH
Q psy9726 289 DVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPEC-VVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYYG 366 (381)
Q Consensus 289 dVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~-a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~~A 366 (381)
|||||+|||||||||++|+++||+||+||+|+|++. +||||+| ||||||||||+|||+|+|||++|||+| ||+.++|
T Consensus 241 DVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~~a~fEpvH-GSAPdiAGk~iANP~A~IlS~ammL~~~lg~~~~A 319 (363)
T 1cnz_A 241 DVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQGFGLYEPAG-GSAPDIAGKNIANPIAQILSLALLLRYSLDANDAA 319 (363)
T ss_dssp SEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTSCEEEEESS-CCCGGGTTTTCSCCHHHHHHHHHHHHHHSSCHHHH
T ss_pred eEEEECCcchHHHHHHHHHhcCCCcccccceeCCCCCeEEEcCC-CChhhhcCCCccCcHHHHHHHHHHHHHHCCCHHHH
Confidence 999999999999999999999999999999999875 8999999 999999999999999999999999999 9999999
Q ss_pred HHHHHHHHHHHHcC
Q psy9726 367 DMIRNAVNRVLKAG 380 (381)
Q Consensus 367 ~~i~~Av~~~l~~G 380 (381)
++|++||.++|++|
T Consensus 320 ~~Ie~Av~~~l~~g 333 (363)
T 1cnz_A 320 TAIEQAINRALEEG 333 (363)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999987
No 18
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=100.00 E-value=5.7e-105 Score=798.57 Aligned_cols=307 Identities=29% Similarity=0.436 Sum_probs=286.6
Q ss_pred CceEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCC
Q psy9726 71 GRTKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYS 144 (381)
Q Consensus 71 ~~~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~ 144 (381)
.+|+|++|||||||||||+++++||+++ +++|+|+++++|++++++++. |++++++|+++|++||||+++|.|+
T Consensus 41 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~k~~daiL~Gavg~P~~~ 120 (405)
T 3r8w_A 41 KRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDLVGVPLPEETISAAKESDAVLLGAIGGYKWD 120 (405)
T ss_dssp CEEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGGT
T ss_pred CCeEEEEECCCcccHHHHHHHHHHHHHHHHhcCCceEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCCcc
Confidence 3689999999999999999999999997 689999999999999887643 6999999999999999999999874
Q ss_pred CC---cccchhhHHHHHhhcceeecEEeeecCCC--CCCC-----CCccEEEeccCCCceeecccceee-----CCeEee
Q psy9726 145 HT---GELQTLNMKLRKALDLYANVVHVKSLPGV--KVRH-----SNVDCVIIREQTEGEYSALEHECV-----PGVVEC 209 (381)
Q Consensus 145 ~~---~~~~s~~~~LR~~ldlyanvRPv~~~pg~--~~~~-----~~iDivIvREnteG~Y~g~e~~~~-----~~va~~ 209 (381)
.. ..++++|++|||+||||||+||||++||+ ++|+ +++|||||||||||+|+|.++... ++++++
T Consensus 121 ~~~~~~~p~~~ll~LRk~ldLyaNlRP~k~~~gl~~~splk~~~~~~vD~vIvREnTeG~Y~G~e~~~~~~~~~~~~a~~ 200 (405)
T 3r8w_A 121 NNEKHLRPEKGLLQIRAALKVFANLRPATVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFN 200 (405)
T ss_dssp TSCGGGSHHHHHHHHHHHHTCCEEEEEEECCGGGGGGSSBCHHHHTTCEEEEEEECSCSTTTCSSCEEEECSSSCEEEEE
T ss_pred CCccccCcccchHHHHHHhCCeEEEEEeeccCCccccCccccccCCCceEEEEeeCCCCeecCCccccccCCCCceEEEE
Confidence 32 23456799999999999999999999999 4665 579999999999999999987642 347899
Q ss_pred eeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCcc
Q psy9726 210 LKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFD 289 (381)
Q Consensus 210 ~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fd 289 (381)
+++|||+++|||+|+||+||++| ||+||+|||+|||+.+ +||+++|+||+++||||+++|++||+|+||||++|++||
T Consensus 201 ~~~~Tr~~~eRIar~AFe~A~~r-rkkVT~v~KaNVlk~s-glf~~~~~eva~eYPdV~~~~~~VD~~amqLV~~P~~FD 278 (405)
T 3r8w_A 201 TEVYAAHEIDRIARVAFETARKR-RGKLCSVDKANVLEAS-ILWRKRVTALASEYPDVELSHMYVDNAAMQLVRDPKQFD 278 (405)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHTT-TSEEEEEECTTTCHHH-HHHHHHHHHHGGGSTTSEEEEEEHHHHHHHHHHCGGGCS
T ss_pred EEEecHHHHHHHHHHHHHHHHHc-CCeEEEEECchhhccc-cHHHHHHHHHHhHCCCCeEEeeeHHHHHHHHHhChhhCc
Confidence 99999999999999999999976 7899999999999976 999999999999999999999999999999999999999
Q ss_pred EEEcCCcchhHHHHhhhhhcCCcccccccccCCC-ccccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchHHHH
Q psy9726 290 VMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPE-CVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYYGD 367 (381)
Q Consensus 290 Vivt~Nl~GDILSDlaa~l~GslGl~psanig~~-~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~~A~ 367 (381)
||||+|||||||||++|+++||+||+||+|+|++ ++||||+| ||||||||||+|||+|+|||++|||+| ||+.++|+
T Consensus 279 ViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~~a~fEpvH-GSAPDIAGk~iANP~A~IlS~amML~~slg~~~~A~ 357 (405)
T 3r8w_A 279 TIVTNNIFGDILSDEASMITGSIGMLPSASLSDSGPGLFEPIH-GSAPDIAGQDKANPLATILSAAMLLKYGLGEEKAAK 357 (405)
T ss_dssp EEEECHHHHHHHHHHHHHHHSCGGGCEEEEECSSSCCEEEESS-CCCGGGTTTTCCCCHHHHHHHHHHHHHTTCCTTHHH
T ss_pred EEeecchhhHHHHHHHHHhcCcccccceeeecCCCCeEEecCC-CChhhhCCCCCCCcHHHHHHHHHHHHhhCccHHHHH
Confidence 9999999999999999999999999999999976 69999999 999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHcC
Q psy9726 368 MIRNAVNRVLKAG 380 (381)
Q Consensus 368 ~i~~Av~~~l~~G 380 (381)
+|++||.++|++|
T Consensus 358 ~Ie~AV~~~l~~G 370 (405)
T 3r8w_A 358 RIEDAVLVALNNG 370 (405)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 9999999999987
No 19
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=100.00 E-value=1.1e-104 Score=782.60 Aligned_cols=298 Identities=35% Similarity=0.564 Sum_probs=288.3
Q ss_pred eEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCCC
Q psy9726 73 TKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSHT 146 (381)
Q Consensus 73 ~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~~ 146 (381)
|+|++|||||||||||+++++||+++ +++|+|+++++|.+++++++. |++++++|+++|++||||+++|.+
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~tP~~--- 78 (336)
T 1wpw_A 2 FTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGPVGESAA--- 78 (336)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEECCSHHHHHHSSSSSCHHHHHHHHTCSEEEECCCCTTHH---
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhhCCCeEEEEEecchHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCc---
Confidence 79999999999999999999999998 899999999999999988754 699999999999999999999964
Q ss_pred cccchhhHHHHHhhcceeecEEeeecCCCCCCCCCccEEEeccCCCceeecccceeeCCeEeeeeeecHHHHHHHHHHHH
Q psy9726 147 GELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVTAEKSRRIAKFAF 226 (381)
Q Consensus 147 ~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~Tr~~~eRiar~AF 226 (381)
.+|++|||+||||+|+||||++||+++|++++|||||||||||+|+|.+++..+++++++++||++++|||+|+||
T Consensus 79 ----~~~l~lR~~ldlyan~RP~~~~pg~~~~~~~~D~vivREnteg~Y~g~~~~~~~~va~~~~~~T~~~~eRiar~AF 154 (336)
T 1wpw_A 79 ----DVVVKLRQIYDMYANIRPAKSIPGIDTKYGNVDILIVRENTEDLYKGFEHIVSDGVAVGMKIITRFASERIAKVGL 154 (336)
T ss_dssp ----HHHHHHHHTTTCCEEEEEEECCTTTCCSCSCCEEEEEEECSSBTTTCCEEEEETTEEEEEEEEEHHHHHHHHHHHH
T ss_pred ----chHHHHHHHhCCEEEEEEEeccCCCCCCCCCCcEEEEecCccCeEcCCccccCCCeEEEEEEecHHHHHHHHHHHH
Confidence 2899999999999999999999999999999999999999999999999877789999999999999999999999
Q ss_pred HHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhh
Q psy9726 227 DYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLAS 306 (381)
Q Consensus 227 e~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa 306 (381)
+||++| ||+||++||+|||+.|||||+++|+|++++ ||+++|++||+|+||||++|++||||||+|||||||||++|
T Consensus 155 ~~A~~r-rkkvt~v~KaNvlk~t~glf~~~~~eva~~--~I~~~~~~vD~~~~~lv~~P~~FDVivt~NlfGDIlSD~aa 231 (336)
T 1wpw_A 155 NFALRR-RKKVTCVHKANVMRITDGLFAEACRSVLKG--KVEYSEMYVDAAAANLVRNPQMFDVIVTENVYGDILSDEAS 231 (336)
T ss_dssp HHHHTT-TSEEEEEECTTTCTTHHHHHHHHHHHHHTT--TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHH
T ss_pred HHHHHh-CCeEEEEECCcchhhhhHHHHHHHHHHHHh--CceeEEEeHHHHHHHHhhCcccceEEEEcCcchHHHHHHHH
Confidence 999998 889999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred hhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCc-------hHHHHHHHHHHHHHHHc
Q psy9726 307 GLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNL-------QYYGDMIRNAVNRVLKA 379 (381)
Q Consensus 307 ~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~-------~~~A~~i~~Av~~~l~~ 379 (381)
+++||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+|||+ .++|++|++||.++|++
T Consensus 232 ~l~GslGl~pSanig~~~a~fEp~H-GSApdiaGk~iANP~A~IlS~ammL~~lg~~d~~~~~~~~A~~Ie~Av~~~l~~ 310 (336)
T 1wpw_A 232 QIAGSLGIAPSANIGDKKALFEPVH-GAAFDIAGKNIGNPTAFLLSVSMMYERMYELSNDDRYIKASRALENAIYLVYKE 310 (336)
T ss_dssp HHHTCGGGCEEEEECSSCEEEEESS-CCCTTTTTSSCCCTHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCccccceEEECCCCceEeCCC-CCchhhCCCCCcCcHHHHHHHHHHHHHcCccccccchHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999 999999999999999999999999999999 99999999999999999
Q ss_pred CC
Q psy9726 380 GK 381 (381)
Q Consensus 380 G~ 381 (381)
|+
T Consensus 311 g~ 312 (336)
T 1wpw_A 311 RK 312 (336)
T ss_dssp CS
T ss_pred CC
Confidence 83
No 20
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=100.00 E-value=1.5e-104 Score=804.02 Aligned_cols=326 Identities=31% Similarity=0.460 Sum_probs=306.1
Q ss_pred cccCCCceEEEeeCCCCCCcceeeeccccccCCCCceEEEEecCCCchhHHHHHHHHHHHHc-------CCCcceEEEec
Q psy9726 37 QSVPEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAA-------NVPVDFEPFFF 109 (381)
Q Consensus 37 ~~~~~~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~-------~~~i~~~~~~~ 109 (381)
.+.|....++|+..|.-+.|+ +++|++|||||||||||+++++||+++ +++|+|+++++
T Consensus 14 ~~~~~~~~~i~~~~~~~~vp~--------------~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~ 79 (435)
T 1tyo_A 14 LSPPPGGSLVEYSGGSLRVPD--------------NPVVAFIRGDGVGPEVVESALKVVDAAVKKVYGGSRRIVWWELLA 79 (435)
T ss_dssp CCCCTTCBCCEEETTEEECCS--------------SBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred ecCCCCCCeEEecCCeecCCC--------------CCEEEEECCCCcCHHHHHHHHHHHHHHHHhhcCCCcceEEEEEec
Confidence 344556778888888878887 899999999999999999999999987 38999999999
Q ss_pred ccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCC---CccE
Q psy9726 110 SEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS---NVDC 184 (381)
Q Consensus 110 g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~---~iDi 184 (381)
|.+++++++. |++|+++|+++|++||||+++|.+ ++++|+|++|||+||||||+|||+++ |+++|++ ++||
T Consensus 80 G~~~~~~~G~~lp~etl~~~k~~da~LkGav~tP~~---~~~~s~~l~LRk~LdlyanlRPv~~~-gv~splk~~~~vDi 155 (435)
T 1tyo_A 80 GHLAREKCGELLPKATLEGIRLARVALKGPLETPVG---TGYRSLNVAIRQALDLYANIRPVRYY-GQPAPHKYADRVDM 155 (435)
T ss_dssp SHHHHHHHSSSSCHHHHHHHHHHSEEEECCCCCCTT---SCTTHHHHHHHHHHTCCEEEEEEECC-SCCCSBTTGGGCEE
T ss_pred hHHHHHhhCCcCCHHHHHHHHhCCeEEECCccCCCc---ccccChhHHHHHHcCCEEEeEEEEec-CCCCCCCCcCCCcE
Confidence 9999988754 699999999999999999999964 46789999999999999999999999 9999885 5999
Q ss_pred EEeccCCCceeeccccee--------------------eCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCC
Q psy9726 185 VIIREQTEGEYSALEHEC--------------------VPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKAN 244 (381)
Q Consensus 185 vIvREnteG~Y~g~e~~~--------------------~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaN 244 (381)
|||||||||+|+|.+++. .+++++++++||++++|||+|+||+||++|+||+||+|||+|
T Consensus 156 vIvREnTeg~Y~G~e~~~~~~~~~~v~~~~~~~~~~~~~~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaN 235 (435)
T 1tyo_A 156 VIFRENTEDVYAGIEWPHDSPEAARIRRFLAEEFGISIREDAGIGVKPISRFATRRLMERALEWALRNGNTVVTIMHKGN 235 (435)
T ss_dssp EEEEECSSSGGGCCEECTTSHHHHHHHHHHHHHHCCCCCTTEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEEECTT
T ss_pred EEEecCCCCeecccccccCCccccceeccchhhccccCCCCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence 999999999999998743 246899999999999999999999999998889999999999
Q ss_pred ccccccHHHHHHHHHHHh-hCCC--------------------eEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHH
Q psy9726 245 IMKLGDGLFLNSCKEMAK-LYPK--------------------IQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDN 303 (381)
Q Consensus 245 v~~~tdglf~~~~~eva~-eypd--------------------I~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSD 303 (381)
||+.|||||+++|+||++ +||+ |+++|++||+|+||||++|++||||||+|||||||||
T Consensus 236 Vlk~tdGlf~~~~~eva~~eypd~~~~e~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD 315 (435)
T 1tyo_A 236 IMKYTEGAFMRWAYEVALEKFREHVVTEQEVQEKYGGVRPEGKILVNDRIADNMLQQIITRPWDYQVIVAPNLNGDYISD 315 (435)
T ss_dssp TSTTTHHHHHHHHHHHHHHHSGGGEEEHHHHHHHSTTCCCTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHHhCCCcccccccccccccccccCCeEEEEeeeHHHHHHHHhhCCCCceEEEEcccchHHHHH
Confidence 999999999999999997 9999 9999999999999999999999999999999999999
Q ss_pred hhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHH-hhcCchHHHHHHHHHHHHHHHcCC
Q psy9726 304 LASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKML-SHVNLQYYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 304 laa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL-~hlg~~~~A~~i~~Av~~~l~~G~ 381 (381)
++|+++||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++||| +|||+.++|++|++||.++|++|+
T Consensus 316 ~aA~l~GslGlapSanig~~~a~fEpvH-GSAPdiAGk~iANP~A~IlS~amML~~hlg~~~~A~~Ie~Av~~~l~~g~ 393 (435)
T 1tyo_A 316 AASALVGGIGMAAGMNMGDGIAVAEPVH-GTAPKYAGKDLINPSAEILSASLLIGEFMGWREVKSIVEYAIRKAVQSKK 393 (435)
T ss_dssp HHHHHTTCGGGCEEEEECSSCEEEEESS-CCCGGGTTSSCSCCHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhhcCCcccCceeeECCCceeeecCC-CChHHhcCCCCcCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999 9999999999999999999999999 999999999999999999999874
No 21
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=100.00 E-value=2.4e-104 Score=787.00 Aligned_cols=305 Identities=28% Similarity=0.452 Sum_probs=283.9
Q ss_pred eEEEEecCCCchhHHHHHHHHHHHHc----CCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC-
Q psy9726 73 TKCTLIPGDGVGPELVYSVQEVFKAA----NVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH- 145 (381)
Q Consensus 73 ~~IavipGDGIGpEV~~aa~~VL~a~----~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~- 145 (381)
++|++|||||||||||+++++||+++ +++|+|+++++|.+++++++. |++++++|+++|++||||+++|+|+.
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~p~~~~~ 81 (358)
T 1a05_A 2 KKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDAY 81 (358)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTTS
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCcHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCcccC
Confidence 79999999999999999999999997 789999999999999988754 69999999999999999999998643
Q ss_pred Ccc--cchhhHHHHHhhcceeecEEeeecCCCC--CCC-----CCccEEEeccCCCceeeccccee--e--CCeEeeeee
Q psy9726 146 TGE--LQTLNMKLRKALDLYANVVHVKSLPGVK--VRH-----SNVDCVIIREQTEGEYSALEHEC--V--PGVVECLKI 212 (381)
Q Consensus 146 ~~~--~~s~~~~LR~~ldlyanvRPv~~~pg~~--~~~-----~~iDivIvREnteG~Y~g~e~~~--~--~~va~~~~~ 212 (381)
+.. .++.|++|||+||||||+|||+++||+. +|+ +++|||||||||||+|+|.++.. . +++++++++
T Consensus 82 ~~~~~~e~~ll~lRk~ldlyanvRP~~~~pgl~~~splk~~~~~~vDivIvREnteg~Y~g~~~~~~~~~~~~~a~~~~~ 161 (358)
T 1a05_A 82 PPAKRPEQGLLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLEVIDGKRRGFNTMV 161 (358)
T ss_dssp CGGGSHHHHHHHHHHHHTCCEEEEEEECCTTSGGGCSBCHHHHTTCEEEEEEECSSSTTTCSSCEEEEETTEEEEEEEEE
T ss_pred CccccchhhHHHHHHHcCCEEEEEEEEecCCccCCCCCccccCCCceEEEEEecCCCcccCCcCccccCCCCceEEEEEE
Confidence 111 2233999999999999999999999984 665 47999999999999999986432 1 257889999
Q ss_pred ecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEE
Q psy9726 213 VTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 213 ~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdViv 292 (381)
||++++|||+|+||+||++| ||+||+|||+|||+ +++||+++|+|++++||+|+++|++||+|+||||++|++|||||
T Consensus 162 ~T~~~~eRiar~AFe~A~~r-rkkVt~v~KaNvlk-~~~lf~~~~~eva~eypdI~~~~~~vD~~~mqlv~~P~~FDViv 239 (358)
T 1a05_A 162 YDEDEIRRIAHVAFRAAQGR-RKQLCSVDKANVLE-TTRLWREVVTEVARDYPDVRLSHMYVDNAAMQLIRAPAQFDVLL 239 (358)
T ss_dssp EEHHHHHHHHHHHHHHHHTT-TSEEEEEECTTTCH-HHHHHHHHHHHHGGGCTTSEEEEEEHHHHHHHHHHCGGGCSEEE
T ss_pred EcHHHHHHHHHHHHHHHHhc-CCeEEEEECCcccc-cchhHHHHHHHHHHHCCCceEEeeeHHHHHHHHHhCCCcccEEE
Confidence 99999999999999999998 78999999999999 78999999999999999999999999999999999999999999
Q ss_pred cCCcchhHHHHhhhhhcCCcccccccccCCCccccccCCcCccccccCCCccChhHHHHHHHHHHhh-cCchHHHHHHHH
Q psy9726 293 MPNLYGNIVDNLASGLVGGAGVVAGASWSPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSH-VNLQYYGDMIRN 371 (381)
Q Consensus 293 t~Nl~GDILSDlaa~l~GslGl~psanig~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~h-lg~~~~A~~i~~ 371 (381)
|+|||||||||++|+++||+||+||+|+|++.+||||+| ||||||||||+|||+|+|||++|||+| ||+.++|++|++
T Consensus 240 t~NlfGDIlSD~aa~l~GslGl~pSanig~~~~~fEpvH-GSAPdiAGk~iANP~A~IlS~ammL~~~lg~~~~A~~Ie~ 318 (358)
T 1a05_A 240 TGNMFGDILSDEASQLTGSIGMLPSASLGEGRAMYEPIH-GSAPDIAGQDKANPLATILSVAMMLRHSLNAEPWAQRVEA 318 (358)
T ss_dssp ECHHHHHHHHHHHHHTTSCGGGCEEEEECSSCEEEEESS-CCCGGGTTTTCSCCHHHHHHHHHHHHHTSSCHHHHHHHHH
T ss_pred ecCcccHhHHHHHHhhcCCccccceeeeCCCceeeecCC-CChhHhcCCCccCcHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 999999999999999999999999999998889999999 999999999999999999999999999 999999999999
Q ss_pred HHHHHHHcC
Q psy9726 372 AVNRVLKAG 380 (381)
Q Consensus 372 Av~~~l~~G 380 (381)
||.++|++|
T Consensus 319 Av~~~l~~g 327 (358)
T 1a05_A 319 AVQRVLDQG 327 (358)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999999987
No 22
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=100.00 E-value=2.3e-104 Score=800.85 Aligned_cols=320 Identities=30% Similarity=0.450 Sum_probs=301.1
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCceEEEEecCCCchhHHHHHHHHHHHHc-----C--CCcceEEEecccccCC
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAA-----N--VPVDFEPFFFSEVNPT 115 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~-----~--~~i~~~~~~~g~~~~~ 115 (381)
..++|+..|.-+.|+ +++|++|||||||||||+++++||+++ + ++|+|+++++|.++++
T Consensus 4 ~~~~~~~~~~~~vp~--------------~~~I~vipGDGIGpEI~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~ 69 (423)
T 1hqs_A 4 GEKITVSNGVLNVPN--------------NPIIPFIEGDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVYAGEKAYN 69 (423)
T ss_dssp SBCCEEETTEEECCS--------------SBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHHHHH
T ss_pred CceEEecCCeEeCCC--------------CCEEEEECCCCcCHHHHHHHHHHHHHHHhhhcCCCCceEEEEEecCHHHHH
Confidence 457777777777887 789999999999999999999999987 2 8999999999999998
Q ss_pred CCCC--hHHHHHHHHhcCcEEEecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCC---CccEEEeccC
Q psy9726 116 MSAP--LETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS---NVDCVIIREQ 190 (381)
Q Consensus 116 ~~~~--~~etl~~i~~~daiL~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~---~iDivIvREn 190 (381)
+++. |++|+++|+++|++||||+++|.. ++++|+|++|||+||||||+|||+++||+++|++ ++||||||||
T Consensus 70 ~~g~~lp~etl~~~k~~da~lkGav~tP~~---~~~~s~nl~LRk~LdlyanvRPv~~~pg~~splk~~~~vDivIvREn 146 (423)
T 1hqs_A 70 KTGEWLPAETLDVIREYFIAIKGPLTTPVG---GGIRSLNVALRQELDLFVCLRPVRYFTGVPSPVKRPEDTDMVIFREN 146 (423)
T ss_dssp HHSCSSCHHHHHHHHHHCEEEECCCCCCSS---SSSCCHHHHHHHHTTCCEEEEEEECCTTCCCSBSCGGGCEEEEEEEC
T ss_pred hhCCcCcHHHHHHHHHCCEEEECCccCCCC---cCcCChhHHHHHHcCCEEEEEEEeccCCCCCCCCCCCCCcEEEEecC
Confidence 8754 699999999999999999999964 4678999999999999999999999999999875 6999999999
Q ss_pred CCceeeccccee-----------------------eCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccc
Q psy9726 191 TEGEYSALEHEC-----------------------VPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMK 247 (381)
Q Consensus 191 teG~Y~g~e~~~-----------------------~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~ 247 (381)
|||+|+|.++.. .+++++++++||++++|||+|+||+||++|+||+||+|||+|||+
T Consensus 147 teg~Y~G~e~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~a~~~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk 226 (423)
T 1hqs_A 147 TEDIYAGIEYAKGSEEVQKLISFLQNELNVNKIRFPETSGIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMK 226 (423)
T ss_dssp SCGGGGCCEECTTCHHHHHHHHHHHHHSCCCCCSCGGGEEEEEEEEEHHHHHHHHHHHHHHHHHHTCSEEEEEECTTTST
T ss_pred CCCeecccccccCCccccceeccccccccccccccCCceEEEEEEEcHHHHHHHHHHHHHHHHHcCCCcEEEEECCccch
Confidence 999999998652 236889999999999999999999999998889999999999999
Q ss_pred cccHHHHHHHHHHHh-hCCC--------------------------------eEEeEEeHHHHHHHHHhCCCCccEEEcC
Q psy9726 248 LGDGLFLNSCKEMAK-LYPK--------------------------------IQFEQMIVDNCTMQIVSNPHQFDVMVMP 294 (381)
Q Consensus 248 ~tdglf~~~~~eva~-eypd--------------------------------I~~~~~~vD~~~~~lv~~P~~fdVivt~ 294 (381)
.|||||+++|+|+++ +||+ |+++|++||+|+||||++|++||||||+
T Consensus 227 ~t~Glf~~~~~eva~~eypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~ 306 (423)
T 1hqs_A 227 FTEGAFKNWGYELAEKEYGDKVFTWAQYDRIAEEQGKDAANKAQSEAEAAGKIIIKDSIADIFLQQILTRPNEFDVVATM 306 (423)
T ss_dssp TTHHHHHHHHHHHHHHHHGGGEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCSEEEEC
T ss_pred hhhHHHHHHHHHHHHHhCCCcccchhhhccccccccccccccccccccccCeEEEEEeeHHHHHHHHhhCCCCccEEEEC
Confidence 999999999999997 9999 8999999999999999999999999999
Q ss_pred CcchhHHHHhhhhhcCCcccccccccC--CCccccccCCcCccccccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHH
Q psy9726 295 NLYGNIVDNLASGLVGGAGVVAGASWS--PECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNA 372 (381)
Q Consensus 295 Nl~GDILSDlaa~l~GslGl~psanig--~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~A 372 (381)
|||||||||++|+++||+||+||+|+| ++++||||+| ||||||||||+|||+|+|||++|||+|||+.++|++|++|
T Consensus 307 NlfGDILSD~aA~l~GslGl~pSanigp~~~~alfEp~H-GSAPdiAGk~iANP~A~IlS~amML~hlg~~~~A~~Ie~A 385 (423)
T 1hqs_A 307 NLNGDYISDALAAQVGGIGIAPGANINYETGHAIFEATH-GTAPKYAGLDKVNPSSVILSGVLLLEHLGWNEAADLVIKS 385 (423)
T ss_dssp HHHHHHHHHHHHHHTTCTTTCEEEEECTTTCCEEEEESC-CCCGGGTTTTCSCCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CcchHHHHHHHHhhcCCcccCccceecCCCCceEEecCC-CChhhhCCCCCcCcHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999999999999999999999999 7889999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHcC
Q psy9726 373 VNRVLKAG 380 (381)
Q Consensus 373 v~~~l~~G 380 (381)
|.++|++|
T Consensus 386 v~~~l~~g 393 (423)
T 1hqs_A 386 MEKTIASK 393 (423)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999987
No 23
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.2e-97 Score=750.72 Aligned_cols=305 Identities=17% Similarity=0.224 Sum_probs=282.2
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCC-----
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYS----- 144 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~----- 144 (381)
+++|++|||||||||||+++++||++.+++|+|+++++|.+++++++. |++++++|+++|++||||+++|.++
T Consensus 30 ~~~I~vipGDGIGpEI~~~~~~vL~~~~~~i~~~~~~~G~~~~~~tg~~lp~etl~aik~~da~LkGav~tP~~~~~~e~ 109 (427)
T 3us8_A 30 ANPVVELDGDEMTRIIWQFIKDKLIHPYLDLDLEYYDLGVENRDATDDQVTIDAANAIKKHGVGVKCATITPDEGRVEEF 109 (427)
T ss_dssp CSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHH
T ss_pred cceEEEEcCCcccHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCccccccc
Confidence 578999999999999999999999999999999999999999988865 6999999999999999999999862
Q ss_pred -CCcccchhhHHHHHhhcceeecEEeeecCCCCCCCC--CccEEEeccCCCceeecccceee------------------
Q psy9726 145 -HTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS--NVDCVIIREQTEGEYSALEHECV------------------ 203 (381)
Q Consensus 145 -~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~--~iDivIvREnteG~Y~g~e~~~~------------------ 203 (381)
.+++++|+|++|||+||||+|+||| ++++++++.+ ++|||||||||||+|+|.|+...
T Consensus 110 ~l~~~~~s~n~~LRk~LdlyanvRPv-~~~~ip~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~l~~~~~~G~~~~ 188 (427)
T 3us8_A 110 KLKKMWKSPNGTIRNILGGVIFREPI-ICKNVPRLVPGWTKPIIVGRHAFGDQYRATDFKFPGKGKLSIKFVGEDGQTIE 188 (427)
T ss_dssp TCSSCCCCHHHHHHHHHCSEEEEEEC-CCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETTSCEEE
T ss_pred cccccccCchHHHHHHhCCeEEecce-eccCCCCCCCCCCCCEEEEEeCCCCccCCceeEEecCCcceeeeecccccccc
Confidence 2356889999999999999999999 7777776643 49999999999999999987542
Q ss_pred --------CCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHh-hCC------CeE
Q psy9726 204 --------PGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAK-LYP------KIQ 268 (381)
Q Consensus 204 --------~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~-eyp------dI~ 268 (381)
++++ ...++|++++|||+|+||+||++| +++||+|||+|||+.|||||+++|+||++ +|| +|+
T Consensus 189 ~~~~~~~~~~va-~~~~~T~~~~eRiar~AFe~A~~r-~kkVt~v~KaNIlk~tdglfr~~~~eva~~eYp~~~~~~~I~ 266 (427)
T 3us8_A 189 HDVYDAPGAGVA-LAMYNLDESITEFARASFNYGLQR-KVPVYLSTKNTILKAYDGRFKDIFQKVFDEEFAAQFKAEKLW 266 (427)
T ss_dssp EEEEEESSCEEE-EEEEEEHHHHHHHHHHHHHHHHHH-TCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHTTCC
T ss_pred ccccccCCCcEE-EEEeeCHHHHHHHHHHHHHHHHHc-CCcEEEEECcccchhhhhHHHHHHHHHHHHhCccccCCCCeE
Confidence 2355 557889999999999999999998 57899999999999999999999999998 996 999
Q ss_pred EeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCc--cccccCCcCcccc-----ccCC
Q psy9726 269 FEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPEC--VVFEPGARHTYSE-----AVGK 341 (381)
Q Consensus 269 ~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~--a~FEp~H~GsApd-----iaGk 341 (381)
++|++||+|+||||++|++| ||||+|||||||||++|+++||+||+||+|+|++. +||||+| ||||| ||||
T Consensus 267 ~~~~~VD~~~mqlv~~P~~F-Vivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~a~fEp~H-GSAPd~~~~~iAGk 344 (427)
T 3us8_A 267 YEHRLIDDMVASALKWSGGY-VWACKNYDGDVQSDIVAQGFGSLGLMTSVLMTPDGKTVEAEAAH-GTVTRHYRQHQKGE 344 (427)
T ss_dssp EEEEEHHHHHHHHHHSCCCE-EEEECHHHHHHHHHHHHHHHSCTTSEEEEEECTTSCCEEEECCS-CCCHHHHHHHHTTC
T ss_pred EEEEEHHHHHHHHhhCCCCc-EEEeCCcCCcHHHHHHHHhcCChhhCceeEECCCCCeEEEeCCC-CCcCCccchhcCCC
Confidence 99999999999999999999 99999999999999999999999999999999864 9999999 99999 9999
Q ss_pred Cc-cChhHHHHHHHHHHhhcCc-------hHHHHHHHHHHHHHHHcCC
Q psy9726 342 NV-ANPTAMLLCSTKMLSHVNL-------QYYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 342 ~~-ANP~a~Ils~ammL~hlg~-------~~~A~~i~~Av~~~l~~G~ 381 (381)
|+ |||+|+|||++|||+|||+ .++|++|++||.++|++|+
T Consensus 345 ~i~ANP~A~IlS~ammL~hlG~~~~~~~l~~~A~~Ie~Av~~~l~~g~ 392 (427)
T 3us8_A 345 ETSTNSIASIFAWTRGLAHRAKLDGNAELAKFSETLERVCVDTVESGF 392 (427)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceeCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCC
Confidence 98 9999999999999999997 7899999999999999874
No 24
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=100.00 E-value=2e-96 Score=740.96 Aligned_cols=305 Identities=16% Similarity=0.183 Sum_probs=280.6
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC----
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH---- 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~---- 145 (381)
+++|++|||||||||||++++++|++++++|+|+++++|.+++++++. |++++++|+++|++||||+++|.+++
T Consensus 6 ~~~i~~i~GDgig~ei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~LkGav~tP~~~~~~~~ 85 (402)
T 2uxq_A 6 KTPLVELDGDEMTRVLWPLIKDKLLLPFIDLQTEYYDLGIEERDRTNDQITIDAAEAIKKYGVGVKNATITPNQDRVEEY 85 (402)
T ss_dssp SSCEEEEECCHHHHHHHHHHHHHHTTTTBCCCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHH
T ss_pred ecceEEecCCCccHHHHHHHHHHHHhCCCCeEEEEEecCHHHHHhhCCcCCHHHHHHHHhCCEEEECCccCCCcccCccc
Confidence 478999999999999999999999999999999999999999988865 69999999999999999999997421
Q ss_pred --CcccchhhHHHHHhhcceeecEEeeecCCCCCCCC--CccEEEeccCCCceeecccceee------------------
Q psy9726 146 --TGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS--NVDCVIIREQTEGEYSALEHECV------------------ 203 (381)
Q Consensus 146 --~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~--~iDivIvREnteG~Y~g~e~~~~------------------ 203 (381)
.++++|+|++||++||||+|+|||+ +|+++++.+ ++||||+||||||+|+|.++...
T Consensus 86 ~~~~~~~s~~l~LR~~ldlyan~RPv~-~~~~~~~~~~~~~divIvRE~teg~Y~g~e~~~~~~g~~~~~~~~~~g~~~~ 164 (402)
T 2uxq_A 86 GLKEQWKSPNATVRAMLDGTVFRKPIM-VKNIKPSVRSWQKPIVVGRHAYGDFYKNAEIFAEAGGKLEIVVTDKNGKETR 164 (402)
T ss_dssp TCSSCCCCHHHHHHHHHCCEEEEEECC-CTTCCCSBTTCCSCCEEEEECSCGGGGCEEEEETTCEEEEEEEECTTSCEEE
T ss_pred cccccccCchHHHHHHhCCeEEEEEEE-cCCCCCCCCCCCCCeEEEeccCCCcccCcceeeccCCcceeeeeccCCcccc
Confidence 1256899999999999999999998 799987753 59999999999999998765530
Q ss_pred -------CCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHH-hhCCC------eEE
Q psy9726 204 -------PGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMA-KLYPK------IQF 269 (381)
Q Consensus 204 -------~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva-~eypd------I~~ 269 (381)
.+.+....++|++++|||+|+||+||++| +++||+|||+|||+.|||||+++|+||+ ++||+ |++
T Consensus 165 ~~~~~~~~~~~~~~~~~T~~~~eRiar~AFe~A~~r-~~kVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~~~~~I~~ 243 (402)
T 2uxq_A 165 QTIMEVDEPAIVQGIHNTVASIGHFARACFEYSLDQ-KIDCWFATKDTISKQYDQRFKIIFEEIFAQEYKEKFAAAGIEY 243 (402)
T ss_dssp EEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHH-TCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHHTCCE
T ss_pred ccccccCCCceEEEEEECHHHHHHHHHHHHHHHHHc-CCcEEEEECCCcchhhHHHHHHHHHHHHHHhCCCcccCCeEEE
Confidence 12344455799999999999999999998 6789999999999999999999999999 79999 999
Q ss_pred eEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCc-cccccCCcCccccc-----cCCCc
Q psy9726 270 EQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPEC-VVFEPGARHTYSEA-----VGKNV 343 (381)
Q Consensus 270 ~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~-a~FEp~H~GsApdi-----aGk~~ 343 (381)
+|++||+||||||++|++| ||||+|||||||||++|+++||+||+||+|+|++. +||||+| |||||| ||||+
T Consensus 244 ~~~~vD~~~mqlv~~P~~f-Vivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~lfEpvH-GSAPdi~~~~~aGk~~ 321 (402)
T 2uxq_A 244 FYTLIDDVVARMMKTEGGM-LWACKNYDGDVMSDMVASAFGSLAMMSSVLVSPYGYFEYEAAH-GTVQRHYYQHLKGERT 321 (402)
T ss_dssp EEEEHHHHHHHHTTCCCCS-EEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSCEEEECCS-CCCHHHHHHHHTTCCC
T ss_pred EEEEHHHHHHHHccCCCce-EEEEcccchHHHHHHHHHhcCCccccccceecCCCCeEEeCCC-CChhhhhhhhhcCCCc
Confidence 9999999999999999999 99999999999999999999999999999999876 8999999 999998 99995
Q ss_pred -cChhHHHHHHHHHHhhcCchH-------HHHHHHHHHHHHHHcC
Q psy9726 344 -ANPTAMLLCSTKMLSHVNLQY-------YGDMIRNAVNRVLKAG 380 (381)
Q Consensus 344 -ANP~a~Ils~ammL~hlg~~~-------~A~~i~~Av~~~l~~G 380 (381)
|||+|+|||++|||+|||+.+ +|++|++||.+||++|
T Consensus 322 ~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G 366 (402)
T 2uxq_A 322 STNPVALIYAWTGALRKRGELDGTPDLCAFCDSLEAITIECIESG 366 (402)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccCcHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999866 7999999999999987
No 25
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00 E-value=9.4e-95 Score=731.01 Aligned_cols=306 Identities=19% Similarity=0.219 Sum_probs=278.7
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC----
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH---- 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~---- 145 (381)
+++|++|||||||||||++++++|.+.+++|+|+++++|.+++++++. |++++++|+++|++||||+++|.+++
T Consensus 8 ~~~i~~l~GDgiGpei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~LkGav~tP~~~~~~~~ 87 (413)
T 1lwd_A 8 AKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPDEARVEEF 87 (413)
T ss_dssp SSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHH
T ss_pred cccEEEecCCChhHHHHHHHHHHHHhCCCCeEEEEEecCHHHHhccCCcCcHHHHHHHHHCCEEEECCccCCCcccCccc
Confidence 367999999999999999999999988999999999999999998865 69999999999999999999997421
Q ss_pred --CcccchhhHHHHHhhcceeecEEeeecCCCCCCCC--CccEEEeccCCCceeecccceee------------------
Q psy9726 146 --TGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS--NVDCVIIREQTEGEYSALEHECV------------------ 203 (381)
Q Consensus 146 --~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~--~iDivIvREnteG~Y~g~e~~~~------------------ 203 (381)
.+.++|+|++||++||||+|+|||+. ++++++.+ .+|++|+||||||+|+|.++...
T Consensus 88 ~~~~~~~s~~l~LR~~ldlyan~RPv~~-~~~~~~~~~~~~divIvRe~t~g~Y~g~d~~~~~e~~~~~~~~~~~g~~~~ 166 (413)
T 1lwd_A 88 KLKKMWKSPNGTIRNILGGTVFREPIIC-KNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPKDGSSAK 166 (413)
T ss_dssp TCSSCCCCHHHHHHHHHCSEEEEEECCC-TTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEETTCCCCE
T ss_pred cccccccCccHHHHHhcCCEEEEeeeec-cCCCCCCCCCCCceEEEecccCCccCCceeEeccCCcceeeEeccCCcccc
Confidence 12467999999999999999999975 77766543 59999999999999998654320
Q ss_pred --------CCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHH-hhCCC------eE
Q psy9726 204 --------PGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMA-KLYPK------IQ 268 (381)
Q Consensus 204 --------~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva-~eypd------I~ 268 (381)
.+.+....+||++++|||+|+||+||++| +++||+|||+|||+.|||||+++|+||+ ++||+ |+
T Consensus 167 ~~~~~~~~~~~~~~~~~~T~~~~eRiar~AFe~A~~r-~~kVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~~~~~I~ 245 (413)
T 1lwd_A 167 QWEVYNFPAGGVGMGMYNTDESISGFAHSCFQYAIQK-KWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDFDKYKIW 245 (413)
T ss_dssp EEEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHH-TCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHTTCC
T ss_pred cccccccCCCcEEEEEEEcHHHHHHHHHHHHHHHHHh-CCceEEEECCcchhhHHHHHHHHHHHHHHHhCCCcccCCeEE
Confidence 12455566999999999999999999998 6789999999999999999999999999 79999 99
Q ss_pred EeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCc--cccccCCcCccccc-----cCC
Q psy9726 269 FEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPEC--VVFEPGARHTYSEA-----VGK 341 (381)
Q Consensus 269 ~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~--a~FEp~H~GsApdi-----aGk 341 (381)
++|++||+||||||++|++| ||||+|||||||||++|+++||+||+||+|+|++. +||||+| |||||| |||
T Consensus 246 ~~~~~VD~~~mqlv~~P~~F-Vivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvH-GSAPdi~~~~~aGk 323 (413)
T 1lwd_A 246 YEHRLIDDMVAQVLKSSGGF-VWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAH-GTVTRHYREHQKGR 323 (413)
T ss_dssp EEEEEHHHHHHHHHHSCCCE-EEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCS-CCCHHHHHHHHTTC
T ss_pred EEEEEHHHHHHHHhcCCCce-EEEecccccchHHHHHHhhcCCccccccceeCCCCCceEEeCCC-CChhhhhhhhhcCC
Confidence 99999999999999999999 99999999999999999999999999999999865 8999999 999998 999
Q ss_pred Cc-cChhHHHHHHHHHHhhcCchH-------HHHHHHHHHHHHHHcCC
Q psy9726 342 NV-ANPTAMLLCSTKMLSHVNLQY-------YGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 342 ~~-ANP~a~Ils~ammL~hlg~~~-------~A~~i~~Av~~~l~~G~ 381 (381)
++ |||+|+|||++|||+|||+.+ +|++|++||.++|++|.
T Consensus 324 ~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~ 371 (413)
T 1lwd_A 324 PTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGA 371 (413)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCccChHHHHHHHHHHHHHcCCccccchhHHHHHHHHHHHHHHHHcCC
Confidence 96 999999999999999999875 89999999999999873
No 26
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=100.00 E-value=8.6e-94 Score=721.62 Aligned_cols=306 Identities=18% Similarity=0.220 Sum_probs=278.4
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC----
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH---- 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~---- 145 (381)
+++|++||||||||||+++++++|++++++|+|+++++|.+++++++. |++++++|+++|++||||+++|.+++
T Consensus 7 ~~~I~~l~GDgiG~ei~~~v~~~l~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~lkGav~tP~~~~~~~~ 86 (399)
T 1zor_A 7 KNPIVELDGDEMARVMWKMIKEKLILPYLDIQLVYFDLGIKKRDETDDQITIEAAKAIKKYGVGVKCATITPDAERVKEY 86 (399)
T ss_dssp CSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHH
T ss_pred cccEEEecCCcccHHHHHHHHHHHHhCCCCeEEEEEeCCHHHHhccCCcCcHHHHHHHHHCCEEEEcCccCCCcccCccc
Confidence 457999999999999999999999999999999999999999988865 69999999999999999999997421
Q ss_pred --CcccchhhHHHHHhhcceeecEEeeecCCCCCCCC--CccEEEeccCCCceeeccccee----------e--------
Q psy9726 146 --TGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS--NVDCVIIREQTEGEYSALEHEC----------V-------- 203 (381)
Q Consensus 146 --~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~--~iDivIvREnteG~Y~g~e~~~----------~-------- 203 (381)
.++++|+|++|||+||||+|+|||+ +++++++.+ .+|++|+||||||.|+|.++.. .
T Consensus 87 ~~~~~~~s~~l~LR~~ldlyan~RPv~-~~~~~~~~~~~~~divi~Re~t~g~Y~g~d~~~~~e~t~~~~y~~e~~~~~~ 165 (399)
T 1zor_A 87 NLKKAWKSPNATIRAYLDGTVFRKPIM-VKNVPPLVKRWKKPIIIGRHAYGDIYNAVEAKVEGPAEVELVVRNKENKTLL 165 (399)
T ss_dssp TCSSCCCCHHHHHHHHHTCEEEEEECC-BTTBCCSBTTCCSCCEEEECCSSGGGGCEEEEECSSEEEEEEEESSSCEEEE
T ss_pred cccccccCchHHHHHHhCCEEEEEEee-cCCCCCcccCcCccceeeecccCCCcCCceeEecCCCcceeeEeccccccce
Confidence 0256899999999999999999999 999987653 4999999999999999876421 0
Q ss_pred -----CCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHh----hCCC--eEEeEE
Q psy9726 204 -----PGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAK----LYPK--IQFEQM 272 (381)
Q Consensus 204 -----~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~----eypd--I~~~~~ 272 (381)
.+.+....++|++++|||+|+||+||++| +++||+|||+|||+.|||||+++|+||++ +||+ |+++|+
T Consensus 166 ~~~~~~~~~~~~~~~T~~~~eRiar~AFe~A~~r-~~kVt~v~KaNvlk~sdglf~~~~~eva~~~~~~yp~~~I~~~~~ 244 (399)
T 1zor_A 166 VHKFEGNGVVMAMHNLEKSIRSFAQSCINYAISE-KVDIWFATKDTISKVYHAYFKDIFQEEVDKRKEELEKAGVNYRYM 244 (399)
T ss_dssp EEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHH-TCCEEEEECTTTCTTHHHHHHHHHHHHHHHTHHHHHHTTCCEEEE
T ss_pred eeccCCceEEEEEEecHHHHHHHHHHHHHHHHHh-CCeEEEEECcccHHHHHHHHHHHHHHHHHhhcccCCCCcEEEEEE
Confidence 12344455899999999999999999998 56899999999999999999999999987 9995 999999
Q ss_pred eHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCc-cccccCCcCcccc-----ccCCCc-cC
Q psy9726 273 IVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPEC-VVFEPGARHTYSE-----AVGKNV-AN 345 (381)
Q Consensus 273 ~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~-a~FEp~H~GsApd-----iaGk~~-AN 345 (381)
+||+||||||++|++| ||||+|||||||||++|+++||+||+||+|+|++. +||||+| ||||| |||||+ ||
T Consensus 245 ~vD~~~mqlv~~P~~f-Vivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~~fEpvH-GSAPdi~~~~iaGk~~~AN 322 (399)
T 1zor_A 245 LIDDAAAQILRSEGGM-LWACMNYEGDIMSDMIASGFGSLGLMTSVLVSPDGVYEFEAAH-GTVRRHYYRYLKGEKTSTN 322 (399)
T ss_dssp EHHHHHHHHHHSCCCS-EEEECHHHHHHHHHHHHHHHCCGGGEEEEEECTTCCEEEEESS-CCCHHHHHHHTTTCCCCCC
T ss_pred EHHHHHHHhccCCCce-EEEEccchHHHHHHHHHHhcCCccccceeEecCCCCeEEeCCC-CcccccchhhhcCCCCccC
Confidence 9999999999999999 99999999999999999999999999999999876 7999999 99999 799995 99
Q ss_pred hhHHHHHHHHHHhhcCch-------HHHHHHHHHHHHHHHcCC
Q psy9726 346 PTAMLLCSTKMLSHVNLQ-------YYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 346 P~a~Ils~ammL~hlg~~-------~~A~~i~~Av~~~l~~G~ 381 (381)
|+|+|||++|||+|||+. ++|++|++||.++|++|.
T Consensus 323 P~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~g~ 365 (399)
T 1zor_A 323 PTASIFAWTGAIRKRGELDGTPEVCEFADKLEKAVINTIESGV 365 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999965 579999999999999873
No 27
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=100.00 E-value=4.5e-93 Score=714.54 Aligned_cols=306 Identities=18% Similarity=0.195 Sum_probs=264.1
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC----
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH---- 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~---- 145 (381)
+++|++|||||||||+++..++++++.+++|+|+++++|.+++++++. |++++++|+++|++||||++||.++.
T Consensus 7 ~~~i~~i~GDei~~e~~~~i~~v~~~~~~~i~~~~~d~G~~~~~~tg~~lp~etl~aik~~~v~lkGa~~tP~~~~~~~~ 86 (402)
T 4aoy_A 7 KVPLVEMDGDEMTRIIWRLIKENLLEPYIELNTEYYDLGLENRDKTEDQVTIDAARAIQKYGVGVKCATITPNAQRVEEY 86 (402)
T ss_dssp SSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHHTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHT
T ss_pred cCcEEEECCCchHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECcccCCCccccccc
Confidence 478999999999999999999999999999999999999999988765 69999999999999999999998521
Q ss_pred --CcccchhhHHHHHhhcceeecEEeeecCCCCCCCC--CccEEEeccCCCceeecccceee------------C-----
Q psy9726 146 --TGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHS--NVDCVIIREQTEGEYSALEHECV------------P----- 204 (381)
Q Consensus 146 --~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~--~iDivIvREnteG~Y~g~e~~~~------------~----- 204 (381)
+++++|+|++|||.||||+|+||| ++||++++++ ++|||||||||||+|+|.|++.. +
T Consensus 87 ~l~~~~~s~n~~LR~~Ldlyan~rPv-~~~~i~~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~~~~~~~~g~~~~ 165 (402)
T 4aoy_A 87 NLKKMWKSPNGTIRAILDGTVFRAPI-VVNSIKPFVKGWKKPISIARHAYGDVYKNVEYYVPSAGKAELVFTSENGEVSR 165 (402)
T ss_dssp TCSSCCCCHHHHHHHHHTCEEEEEEC-CCTTSCCSBTTCCBCCEEEEC------CCEEEEECSCEEEEEEEEETTSCEEE
T ss_pred cccccccChHHHHHHHhCCeEEeeeE-eccCCCCcCCCCCCCEEEEEeccCCeecCceeeccCccceeeeeeccCCcccc
Confidence 246889999999999999999999 8999998876 69999999999999999987652 1
Q ss_pred --------CeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHh-hCC------CeEE
Q psy9726 205 --------GVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAK-LYP------KIQF 269 (381)
Q Consensus 205 --------~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~-eyp------dI~~ 269 (381)
..+....++|++++|||+|+||+||++|+ ++||+|||+|||+.|||+|+++|+|+++ +|| +|++
T Consensus 166 ~~~~~~~~~gv~~~~~~t~~~~eRiar~AF~~A~~~~-~~vt~v~KaNilk~tdglf~~~~~eva~~eyp~~~~~~~i~~ 244 (402)
T 4aoy_A 166 QTIHEFDGPGVIMGMHNTDKSIRSFARACFNYALDMN-QDLWFSTKDTISKTYDHRFKDIFQEIYENEYKEKFEAKNLQY 244 (402)
T ss_dssp EEEEEESSCEEEEEEEEEHHHHHHHHHHHHHHHHHHT-CCEEEEECTTTSHHHHHHHHHHHHHHHHHHTHHHHHHTTCCE
T ss_pred cccccccCCeeEEEEEecHHHHHHHHHHHHHHHHHcC-CcEEEEECCccchhhhhHHHHHHHHHHHHhCcccccCCCeEE
Confidence 12344577889999999999999999984 7899999999999999999999999987 998 9999
Q ss_pred eEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCC-ccccccCCcCcccc-----ccCCCc
Q psy9726 270 EQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPE-CVVFEPGARHTYSE-----AVGKNV 343 (381)
Q Consensus 270 ~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~-~a~FEp~H~GsApd-----iaGk~~ 343 (381)
+|++||+|+||||++|++| ||||+|||||||||++|+++||+||+||+|+|++ .+||||+| ||||| ||||++
T Consensus 245 ~~~~vD~~~~~lv~~P~~f-Vivt~Nl~GDIlSD~~A~l~GslGl~psanig~~~~~~fEp~H-GSApd~~~~~iaGk~~ 322 (402)
T 4aoy_A 245 FYTLIDDAVARIIRSEGGM-VWACKNYDGDVMSDMVASAFGSLAMMTSVLVSPDGKYEFEAAH-GTVTRHYYKHLKGEET 322 (402)
T ss_dssp EEEEHHHHHHHHHTSCBCS-EEECCC-CHHHHHHHHHHHHSCTTSEEEEEECTTCCEEEEC------------------C
T ss_pred EEEEHHHHHHHHhhCCCCc-EEEECCcchHHHHHHHHHhcCchhhccccccCCCCceEEeecc-CCccccchhhccCCCc
Confidence 9999999999999999999 9999999999999999999999999999999975 69999999 99999 899997
Q ss_pred -cChhHHHHHHHHHHhhcCc-------hHHHHHHHHHHHHHHHcCC
Q psy9726 344 -ANPTAMLLCSTKMLSHVNL-------QYYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 344 -ANP~a~Ils~ammL~hlg~-------~~~A~~i~~Av~~~l~~G~ 381 (381)
|||+|+|||++|||+|+|+ .++|++|++||.++|++|+
T Consensus 323 ~aNP~A~Ils~a~mL~~~g~~~~~~~l~~~A~~ie~Av~~~l~~g~ 368 (402)
T 4aoy_A 323 STNSMATIFAWTGALKKRGELDGIKELVDFATKLEQASVQTIENGV 368 (402)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTE
T ss_pred CcCcHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999986 5899999999999999873
No 28
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=100.00 E-value=1.3e-91 Score=710.34 Aligned_cols=305 Identities=17% Similarity=0.233 Sum_probs=274.0
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCC--hHHHHHHHHhcCcEEEecccCCCCCC----
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAP--LETVADSIARNGICLKGVLSTPDYSH---- 145 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~--~~etl~~i~~~daiL~G~v~~p~~~~---- 145 (381)
+++|++||||||||||++++.+.+...+++|+|+++++|.+++++++. |++++++|+++|++||||+++|.++.
T Consensus 22 ~~~I~~l~GDgig~evl~~~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~et~~ai~~~da~lkGav~tP~~~~~~e~ 101 (427)
T 2qfy_A 22 KQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDEARVKEF 101 (427)
T ss_dssp SSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHHHHHT
T ss_pred eeeEEEecCCCHHHHHHHHHHHHhccCCCceEEEEEecChHHHhccCCcCcHHHHHHHHHCCEEEECCcCCCCCcccchh
Confidence 468999999999999999998877666889999999999999998865 69999999999999999999997421
Q ss_pred --CcccchhhHHHHHhhcceeecEEeee--cCCC----CCCC-----------CCccEEEeccCCCceee------ccc-
Q psy9726 146 --TGELQTLNMKLRKALDLYANVVHVKS--LPGV----KVRH-----------SNVDCVIIREQTEGEYS------ALE- 199 (381)
Q Consensus 146 --~~~~~s~~~~LR~~ldlyanvRPv~~--~pg~----~~~~-----------~~iDivIvREnteG~Y~------g~e- 199 (381)
.+.++|+|++||+.||||+|+||++. +|++ ++|+ +++|++||||||||+|+ |.+
T Consensus 102 ~l~~~~~s~~~~lR~~ldlyan~RP~~~~~~~~l~~g~~~pl~i~R~~~g~~y~~~D~vivREnteg~Y~~~e~teG~~~ 181 (427)
T 2qfy_A 102 NLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSDPTTAQP 181 (427)
T ss_dssp TCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCEEEEEEEECSSGGGGCEEEEECSSEEEEEEEEESCTTTSCC
T ss_pred hhcccccchHHHHHHhcCCEEEecccccccchhhccCCCCCeeEeecccCCccCCeeEEEeccCccceeeeccccCCccc
Confidence 12478999999999999999999876 7544 4542 57999999999999999 522
Q ss_pred --cee----eCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHH-hhCCC------
Q psy9726 200 --HEC----VPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMA-KLYPK------ 266 (381)
Q Consensus 200 --~~~----~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva-~eypd------ 266 (381)
+.. ..++++. .++|++++|||+|+||+||++| +++||+|||+|||+.|||||+++|+||+ ++|||
T Consensus 182 ~~~~~~~~~~~~v~~~-~~~T~~~ieRIar~AFe~A~~r-~~kVt~v~KaNVlk~s~glfr~v~~eva~~eYpd~~~~~~ 259 (427)
T 2qfy_A 182 QTLKVYDYKGSGVAMA-MYNTDESIEGFAHSSFKLAIDK-KLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSKFEQLG 259 (427)
T ss_dssp EEEEEEEESSCEEEEE-EEEEHHHHHHHHHHHHHHHHHH-TCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHHT
T ss_pred cccccccCCCceEEEE-EEEcHHHHHHHHHHHHHHHHHh-CCceEEEECCccchhhhHHHHHHHHHHHHHhCCCcccCCe
Confidence 111 1345544 5899999999999999999998 5789999999999999999999999998 89999
Q ss_pred eEEeEEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCCc--cccccCCcCccc-----ccc
Q psy9726 267 IQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPEC--VVFEPGARHTYS-----EAV 339 (381)
Q Consensus 267 I~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~~--a~FEp~H~GsAp-----dia 339 (381)
|+++|++||+|+||||++|++| ||||+|||||||||++|+++||+||+||+|+|++. +||||+| |||| |||
T Consensus 260 I~~e~~~VD~~amqlV~~P~~F-Vivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvH-GSAPdi~~~diA 337 (427)
T 2qfy_A 260 IHYEHRLIDDMVAQMIKSKGGF-IMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAH-GTVTRHYRKYQK 337 (427)
T ss_dssp CCEEEEEHHHHHHHHHHSCEEE-EEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSCCEEEECCS-CCCHHHHHHHHT
T ss_pred EEEEEEEHHHHHHHHHhCCCce-EEEECccchHHHHHHHHHhcCcccccceeEeCCCCceeEecCCC-CCcccccchhhc
Confidence 9999999999999999999999 99999999999999999999999999999999876 8999999 9999 789
Q ss_pred CCCc-cChhHHHHHHHHHHhhcCch-------HHHHHHHHHHHHHHH-cC
Q psy9726 340 GKNV-ANPTAMLLCSTKMLSHVNLQ-------YYGDMIRNAVNRVLK-AG 380 (381)
Q Consensus 340 Gk~~-ANP~a~Ils~ammL~hlg~~-------~~A~~i~~Av~~~l~-~G 380 (381)
|||+ |||+|+|||++|||+|||+. ++|++|++||.++|+ +|
T Consensus 338 Gk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~~G 387 (427)
T 2qfy_A 338 GEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLNTVQQDG 387 (427)
T ss_dssp TCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCccCcHHHHHHHHHHHHHhCcccCcchhHHHHHHHHHHHHHHHHhCC
Confidence 9995 99999999999999999976 899999999999999 77
No 29
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=97.29 E-value=5.8e-05 Score=74.45 Aligned_cols=62 Identities=32% Similarity=0.318 Sum_probs=48.4
Q ss_pred cccCCCceEEEeeCCCCCCcceeeeccccccCCCCceEEEEe-cCCCchhHHHHHHHHHHHHc
Q psy9726 37 QSVPEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLI-PGDGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 37 ~~~~~~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavi-pGDGIGpEV~~aa~~VL~a~ 98 (381)
+.+++++++|+++||||||||++.++++++++.+.+...-.. -|.-.|..+.+++++.++..
T Consensus 11 ~~~~~~~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~~~g~~lp~~tl~~~~~~ 73 (349)
T 3blx_A 11 PKKYGGRFTVTLIPGDGVGKEITDSVRTIFEAENIPIDWETINIKQTDHKEGVYEAVESLKRN 73 (349)
T ss_dssp --CCCCCEEEEEEEESHHHHHHHHHHHHHHHHTTCSEEEEECCCSSTTCHHHHHHHHHHHHHH
T ss_pred ccccCCceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecCcccCCcCcHHHHHHHHHC
Confidence 456888999999999999999999999999999765443322 24356777888888888864
No 30
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=96.70 E-value=0.00012 Score=72.21 Aligned_cols=61 Identities=20% Similarity=0.237 Sum_probs=44.3
Q ss_pred cccCCCceEEEeeCCCCCCcceeeeccccccCCCCceE-----EEEecCCCchhHHHHHHHHHHHHc
Q psy9726 37 QSVPEGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTK-----CTLIPGDGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 37 ~~~~~~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~-----IavipGDGIGpEV~~aa~~VL~a~ 98 (381)
.++++++++|+++||||||||++.++++++++.+-... ++.-. |--|.-+.+++++.++..
T Consensus 15 ~~~~~~~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~~~-~~~g~~lp~~tl~~~~~~ 80 (354)
T 3blx_B 15 PNPSTGKYTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPIF-VNGLTTIPDPAVQSITKN 80 (354)
T ss_dssp CCTTTSCEECBCCCCSTTHHHHHHHHHHHHHTTTCSEECCCCCCCCEE-ETTEEECCHHHHHHHHHH
T ss_pred chhcCCceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEEechhh-hhhCCCCCHHHHHHHHHC
Confidence 34577889999999999999999999999999864322 22222 444555666777777653
No 31
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=96.69 E-value=0.0096 Score=58.30 Aligned_cols=136 Identities=7% Similarity=-0.006 Sum_probs=86.4
Q ss_pred eeecHHHHHHHHHHHHHHHHh-CC--CCcEEEEEcCCccccccHHH--------HHHHHHHHhhCCCeEE-eEEeHHHHH
Q psy9726 211 KIVTAEKSRRIAKFAFDYATK-NN--RKKVTAVHKANIMKLGDGLF--------LNSCKEMAKLYPKIQF-EQMIVDNCT 278 (381)
Q Consensus 211 ~~~Tr~~~eRiar~AFe~A~~-r~--~k~Vt~v~KaNv~~~tdglf--------~~~~~eva~eypdI~~-~~~~vD~~~ 278 (381)
..+|.+.+.+.++.+.+.-++ -| +-||-+.- -|==.--.|+| +-..++..++ ++.+ -.+-.|++-
T Consensus 178 ~~it~e~i~~~i~~~~~~l~~~fGi~~PrIAV~g-LNPHAGE~G~~G~EE~~iI~PAi~~lr~~--Gi~~~GP~paDt~F 254 (334)
T 3lxy_A 178 GAITQASLHEVITILDNDLKTKFGITQPQIYVCG-LNPHAGEGGHMGHEEIDTIIPALNTLRQQ--GINLIGPLPADTLF 254 (334)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTSCCSSCCEEEEC-SSGGGGGGGTTCSHHHHTHHHHHHHHHHT--TCCEEEEECHHHHT
T ss_pred hhCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe-cCCCCCCCCCCCchhHHHHHHHHHHHHHC--CCceeCCCChHHhc
Confidence 456899999999988876665 23 23565542 11111012333 3334444444 6654 566689887
Q ss_pred HHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCC--CccccccCCcCccccccCCCccChhHHHHHHHHH
Q psy9726 279 MQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSP--ECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKM 356 (381)
Q Consensus 279 ~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~--~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~amm 356 (381)
.+-.+ +.||++|+.+.+ .+---.--+++--+.|+-- ..---.|-| |||.||||||+|||.+++-|.-+.
T Consensus 255 ~~~~~--~~~D~vlaMYHD------QGlip~K~l~F~~gVNvTlGLP~iRTS~DH-GTAfDIAGkG~A~~~S~~~Ai~~A 325 (334)
T 3lxy_A 255 QPKYL--QHADAVLAMYHD------QGLPVLKYQGFGRAVNITLGLPFIRTSVDH-GTALELAATGTADVGSFITALNLA 325 (334)
T ss_dssp SHHHH--TTCSEEEESSHH------HHHHHHHHHHTTCCEEEEESSSSCEEEESS-CCCGGGTTTTCSCCHHHHHHHHHH
T ss_pred Chhhh--ccCCEEEEcccc------hhhHhHHhcccCccEEEecCCCeeeecCCC-CcchhhccCCCCChHHHHHHHHHH
Confidence 66655 799999998774 4444444455555666532 222346789 999999999999999998887665
Q ss_pred Hh
Q psy9726 357 LS 358 (381)
Q Consensus 357 L~ 358 (381)
.+
T Consensus 326 ~~ 327 (334)
T 3lxy_A 326 IK 327 (334)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 32
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=96.45 E-value=0.00074 Score=66.28 Aligned_cols=55 Identities=20% Similarity=0.272 Sum_probs=36.9
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCC----CCceEEEEecCC-----CchhHHHHHHHHHHHH
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVP----EGRTKCTLIPGD-----GVGPELVYSVQEVFKA 97 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~----~~~~~IavipGD-----GIGpEV~~aa~~VL~a 97 (381)
+++|+++||||||||++.++++++++. +-+......+=- --|..+.+++++.++.
T Consensus 1 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~ 64 (336)
T 1wpw_A 1 GFTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDK 64 (336)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEECCSHHHHHHSSSSSCHHHHHHHHT
T ss_pred CcEEEEECCCCcCHHHHHHHHHHHHHHHHhhCCCeEEEEEecchHHHHhhCCcCCHHHHHHHHH
Confidence 479999999999999999999999988 444444333310 1133344555555554
No 33
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=96.44 E-value=0.00031 Score=69.70 Aligned_cols=56 Identities=29% Similarity=0.347 Sum_probs=39.7
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCCCCc--eEEEEecCCC-------chhHHHHHHHHHHHH
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVPEGR--TKCTLIPGDG-------VGPELVYSVQEVFKA 97 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~--~~IavipGDG-------IGpEV~~aa~~VL~a 97 (381)
.+++|++|||||||||++.++++|+.+...+ ..+-...-|- -|.-+.+++++.++.
T Consensus 9 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~ 73 (366)
T 3ty4_A 9 RRIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKT 73 (366)
T ss_dssp CEEEEEEEEESTTHHHHHHHHHHHHHTCCGGGCCEEEEEECCCSHHHHHHHSCSSCHHHHHHHHH
T ss_pred CceEEEEECCCccCHHHHHHHHHHHHHHHHhcCCceEEEEecchHHHHHhhCCCCCHHHHHHHHH
Confidence 5789999999999999999999999987543 3455555441 222344556666655
No 34
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=96.43 E-value=0.00083 Score=65.85 Aligned_cols=55 Identities=16% Similarity=0.161 Sum_probs=38.5
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCceEEEEecCCC-----chhHHHHHHHHHHHH
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGDG-----VGPELVYSVQEVFKA 97 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~IavipGDG-----IGpEV~~aa~~VL~a 97 (381)
.++|++|||||||||++.++++++++.+-+...-..+=-+ -|.-+.+++++.++.
T Consensus 1 ~~~I~vipGDGIGpEv~~~a~~vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~ 60 (333)
T 1x0l_A 1 AYRICLIEGDGIGHEVIPAARRVLEATGLPLEFVEAEAGWETFERRGTSVPEETVEKILS 60 (333)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHTTTCCEEEEEECCSHHHHHHHSSSSCHHHHHHHHT
T ss_pred CcEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecchHHHHhhCCcCcHHHHHHHHH
Confidence 3799999999999999999999999997655544443211 233344556565654
No 35
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=96.30 E-value=0.0015 Score=67.04 Aligned_cols=57 Identities=25% Similarity=0.349 Sum_probs=39.7
Q ss_pred CCceEEEeeCCCCCCcceeeeccccccCCCCceEEEEec-C----CCch-hHHHHHHHHHHHH
Q psy9726 41 EGRTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIP-G----DGVG-PELVYSVQEVFKA 97 (381)
Q Consensus 41 ~~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavip-G----DGIG-pEV~~aa~~VL~a 97 (381)
.|+++|+++||||||||++.++.+++++.+-....-..+ | |--| .-+.+++++.++.
T Consensus 17 ~g~~~IavipGDGIGpEV~~~a~~VL~a~~~~ie~~~~~~G~~~~~~~G~~~lp~etle~ik~ 79 (496)
T 2d1c_A 17 DGRKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASGVPQETIESIRK 79 (496)
T ss_dssp TSCEEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCSHHHHTTTCTTSCCHHHHHHHHH
T ss_pred CCCEEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHhccCCCcCcHHHHHHHHH
Confidence 358999999999999999999999999986544443333 1 1223 3344556555555
No 36
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=96.26 E-value=0.0012 Score=65.44 Aligned_cols=55 Identities=18% Similarity=0.251 Sum_probs=38.5
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCc--eEEEEecCCCchh--------HHHHHHHHHHHHc
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGR--TKCTLIPGDGVGP--------ELVYSVQEVFKAA 98 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~--~~IavipGDGIGp--------EV~~aa~~VL~a~ 98 (381)
+++|++|||||||||++.++++|+.+...+ ..|-.-..| +|- -+.+++++.++..
T Consensus 3 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~-~G~~~~~~~g~~lp~~tl~~~~~~ 67 (359)
T 2y3z_A 3 SMKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFP-FGGAAIDAFGEPFPEPTRKGVEEA 67 (359)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCEEEEECC-CTHHHHHHHSSSSCHHHHHHHHHS
T ss_pred ccEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEe-ccHHHHHhhCCcCCHHHHHHHHHC
Confidence 379999999999999999999999988532 244444444 333 3345566666653
No 37
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=96.23 E-value=0.00086 Score=66.70 Aligned_cols=30 Identities=23% Similarity=0.510 Sum_probs=27.4
Q ss_pred CCceEEEeeCCCCCCcceeeeccccccCCC
Q psy9726 41 EGRTKCTLIPGDGVGPELVYSVQEHQSVPE 70 (381)
Q Consensus 41 ~~~~~vt~~pg~gigpe~~~~~~~vfsa~~ 70 (381)
+..|+|++|||||||||++.++++|+++..
T Consensus 11 ~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~ 40 (375)
T 3vmk_A 11 GSSYQIAVLAGDGIGPEVMAEARKVLAAVE 40 (375)
T ss_dssp TSCEEEEEEEESTTHHHHHHHHHHHHHHHH
T ss_pred CCcceEEEECCCcccHHHHHHHHHHHHHHH
Confidence 467999999999999999999999998864
No 38
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=96.07 E-value=0.00081 Score=66.04 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=29.8
Q ss_pred eEEEeeCCCCCCcceeeeccccccCCCCceEEEEecCC
Q psy9726 44 TKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIPGD 81 (381)
Q Consensus 44 ~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~IavipGD 81 (381)
++|++|||||||||++.++++|+++.+.. +-.-..|
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~--~~~~~~~ 37 (337)
T 1w0d_A 2 SKLAIIAGDGIGPEVTAEAVKVLDAVVPG--VQKTSYD 37 (337)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHSTT--CEEEECC
T ss_pred cEEEEeCCCCcCHHHHHHHHHHHHHhcCC--cEEEEEe
Confidence 68999999999999999999999988764 4444444
No 39
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=96.03 E-value=0.001 Score=66.46 Aligned_cols=56 Identities=25% Similarity=0.411 Sum_probs=37.1
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCC----CCceEEEEec-C----CCchhHHHHHHHHHHHHc
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVP----EGRTKCTLIP-G----DGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~----~~~~~Iavip-G----DGIGpEV~~aa~~VL~a~ 98 (381)
.++|++|||||||||++.++++|+.+. +.+......+ | |--|.-+-+++++.++..
T Consensus 23 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~ 87 (390)
T 3u1h_A 23 KKKIAVLPGDGIGPEVMEAAIEVLKAVAERFGHEFEFEYGLIGGAAIDEAGTPLPEETLDVCRGS 87 (390)
T ss_dssp -CEEEEEEESTTHHHHHHHHHHHHHHHHHHHSCCCEEEECCCTHHHHHSSSSSSCHHHHHHHHTS
T ss_pred cceEEEECCCccCHHHHHHHHHHHHHHHHhcCCCeEEEEEEcCHHHHHhhCCcCCHHHHHHHHHC
Confidence 489999999999999999999999887 3333333322 1 112333445666666653
No 40
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=95.93 E-value=0.0016 Score=65.35 Aligned_cols=56 Identities=25% Similarity=0.342 Sum_probs=39.3
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCCCCc--eEEEEecCCCchhH--------HHHHHHHHHHHc
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVPEGR--TKCTLIPGDGVGPE--------LVYSVQEVFKAA 98 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~~~~--~~IavipGDGIGpE--------V~~aa~~VL~a~ 98 (381)
.+++|++|||||||||++.++++|+.+...+ ..+-...-| +|-+ +-+++++.++..
T Consensus 41 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~-~G~~~~~~~G~~lp~~tl~~~k~~ 106 (405)
T 3r8w_A 41 KRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMP-IGGAALDLVGVPLPEETISAAKES 106 (405)
T ss_dssp CEEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCEEEEEECC-CHHHHHHHHSSSSCHHHHHHHHHS
T ss_pred CCeEEEEECCCcccHHHHHHHHHHHHHHHHhcCCceEEEEEE-cCHHHHHhhCCcCCHHHHHHHHHC
Confidence 5789999999999999999999999887532 455555443 3322 334555555543
No 41
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=95.87 E-value=0.0007 Score=67.03 Aligned_cols=39 Identities=18% Similarity=0.308 Sum_probs=30.5
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCc--eEEEEecCC
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGR--TKCTLIPGD 81 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~--~~IavipGD 81 (381)
.++|++|||||||||++.++++|+++...+ ..+-.-..|
T Consensus 6 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~ 46 (361)
T 3udu_A 6 TYKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFELNEAK 46 (361)
T ss_dssp EEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred ceeEEEECCCccCHHHHHHHHHHHHHHHHhcCCCEEEEEEe
Confidence 479999999999999999999999886422 345444443
No 42
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=95.86 E-value=0.0017 Score=64.37 Aligned_cols=54 Identities=26% Similarity=0.358 Sum_probs=38.3
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCc--eEEEEecCCCchhH--------HHHHHHHHHHH
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGR--TKCTLIPGDGVGPE--------LVYSVQEVFKA 97 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~--~~IavipGDGIGpE--------V~~aa~~VL~a 97 (381)
+++|++|||||||||++.++++|+.+...+ ..|-.-..| +|-+ +.+++++.++.
T Consensus 4 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~-~G~~~~~~~g~~lp~~tl~~~~~ 67 (363)
T 1cnz_A 4 NYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYD-VGGIAIDNHGHPLPKATVEGCEQ 67 (363)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECC-CTHHHHHHHSSSSCHHHHHHHHT
T ss_pred ccEEEEeCCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEe-CChHHHhhcCCcCcHHHHHHHHH
Confidence 589999999999999999999999988532 345555544 3433 34555555554
No 43
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=95.70 E-value=0.002 Score=63.75 Aligned_cols=54 Identities=26% Similarity=0.358 Sum_probs=37.5
Q ss_pred eEEEeeCCCCCCcceeeeccccccCCCCc--eEEEEecCCCchhH--------HHHHHHHHHHHc
Q psy9726 44 TKCTLIPGDGVGPELVYSVQEHQSVPEGR--TKCTLIPGDGVGPE--------LVYSVQEVFKAA 98 (381)
Q Consensus 44 ~~vt~~pg~gigpe~~~~~~~vfsa~~~~--~~IavipGDGIGpE--------V~~aa~~VL~a~ 98 (381)
++|++|||||||||++.++++|+++...+ ..+-.-..| +|-+ +.+++++.++..
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~-~G~~~~~~~g~~lp~~tl~~~~~~ 65 (358)
T 1a05_A 2 KKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGL-VGGAALDASDDPLPAASLQLAMAA 65 (358)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECC-CHHHHHHHHSSSSCHHHHHHHHHC
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEe-CCcHHHHhhCCcCCHHHHHHHHHC
Confidence 69999999999999999999999988532 234444443 3433 345566666653
No 44
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=95.66 E-value=0.00098 Score=66.07 Aligned_cols=28 Identities=25% Similarity=0.382 Sum_probs=25.6
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCC
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPE 70 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~ 70 (381)
.++|++|||||||||++.++++|+++..
T Consensus 5 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~ 32 (364)
T 3flk_A 5 SFRIAAIPGDGIGLEVLPEGIRVLEAAA 32 (364)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHHHH
T ss_pred ceEEEEECCCcccHHHHHHHHHHHHHHH
Confidence 5899999999999999999999997754
No 45
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=95.58 E-value=0.0035 Score=63.09 Aligned_cols=29 Identities=17% Similarity=0.308 Sum_probs=26.4
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCCC
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVPE 70 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~~ 70 (381)
..++|++|||||||||++.++++|+.+..
T Consensus 26 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~ 54 (412)
T 2iv0_A 26 DNPIIPYFEGDGIGKDVVPAAIRVLDAAA 54 (412)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcCHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999883
No 46
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=95.46 E-value=0.0045 Score=62.58 Aligned_cols=28 Identities=18% Similarity=0.270 Sum_probs=25.8
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCC
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVP 69 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~ 69 (381)
..++|++|||||||||++.++++|+.++
T Consensus 35 ~~~~I~vipGDGIGpEV~~~a~~Vl~aa 62 (427)
T 3dms_A 35 DQPIIPYIEGDGTGFDITPVMIKVVDAA 62 (427)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHHHH
Confidence 4689999999999999999999999874
No 47
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=95.36 E-value=0.29 Score=50.75 Aligned_cols=177 Identities=18% Similarity=0.173 Sum_probs=119.7
Q ss_pred cceeeCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCC--CeEEeEEe-HH
Q psy9726 199 EHECVPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYP--KIQFEQMI-VD 275 (381)
Q Consensus 199 e~~~~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eyp--dI~~~~~~-vD 275 (381)
+|.+..|-....+-.-...++-.++.|.+.||..|-.-|.-.|+.-. -|.-..+-+++.-++|- +.+++-|- ++
T Consensus 447 eh~Ve~GDIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~Ra---HDa~lI~kV~~yL~~hdt~GLdi~Im~p~~ 523 (741)
T 1itw_A 447 EQSVEAGDIWRMCQAKDAPIQDWVKLAVNRARATNTPAVFWLDPARA---HDAQVIAKVERYLKDYDTSGLDIRILSPVE 523 (741)
T ss_dssp EEEECTTCEEEEEEECHHHHHHHHHHHHHHHHHHTCCEEEECCTTSH---HHHHHHHHHHHHHTTSCCTTCCEEEECHHH
T ss_pred EccccCCcchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCCCc---cHHHHHHHHHHHHHhcCCCCCceEeeCHHH
Confidence 45555565566666677889999999999999876555555554322 24333334444445553 55566555 57
Q ss_pred HHHHHHHhCCCCcc-EEEcCCcchhHHHHhhhhh--cCCccc---ccccccCCCccccccCCcCcccccc------CCCc
Q psy9726 276 NCTMQIVSNPHQFD-VMVMPNLYGNIVDNLASGL--VGGAGV---VAGASWSPECVVFEPGARHTYSEAV------GKNV 343 (381)
Q Consensus 276 ~~~~~lv~~P~~fd-Vivt~Nl~GDILSDlaa~l--~GslGl---~psanig~~~a~FEp~H~GsApdia------Gk~~ 343 (381)
++-..|-+=-.+-| +=||.|..-|+|+||.--| --|-=| .|=-| +-+|||...-||||... |.=.
T Consensus 524 A~~~sleRir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~---GGGLfETGAGGSAPKHVqQ~~eEnhLR 600 (741)
T 1itw_A 524 ATRFSLARIREGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMS---GGGLFETGAGGSAPKHVQQFLEEGYLR 600 (741)
T ss_dssp HHHHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSSEEEEEBTT---SCEEEESCSSCCCHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhccccc---CCccccCCCCcCchHHHHHHHHcCccc
Confidence 77666655445556 7799999999999998743 222222 23222 34899996548999854 2236
Q ss_pred cChhHHHHHHHHHHhhcCch-------HHHHHHHHHHHHHHHcCC
Q psy9726 344 ANPTAMLLCSTKMLSHVNLQ-------YYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 344 ANP~a~Ils~ammL~hlg~~-------~~A~~i~~Av~~~l~~G~ 381 (381)
=+-+|-+|+.+-=|+||+.. --|+.|.+|..+.|++.|
T Consensus 601 WDSLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~K 645 (741)
T 1itw_A 601 WDSLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNNK 645 (741)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCCC
Confidence 67899999999999999752 337889999999888765
No 48
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=95.36 E-value=0.29 Score=50.71 Aligned_cols=177 Identities=15% Similarity=0.095 Sum_probs=119.8
Q ss_pred cceeeCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCC--CeEEeEEe-HH
Q psy9726 199 EHECVPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYP--KIQFEQMI-VD 275 (381)
Q Consensus 199 e~~~~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eyp--dI~~~~~~-vD 275 (381)
+|.+..|-....+-.-...++-.++.|.+.||..|-.-|.-.|+.-. -|.-..+-+++.-++|- +.+++-|- ++
T Consensus 443 eh~Ve~GDIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~Ra---HDa~lI~kV~~yL~~hdt~GLdi~Im~p~~ 519 (738)
T 2b0t_A 443 EHDVEANDIWRACQVKDAPIQDWVKLAVTRSRLSGMPAVFWLDPERA---HDRNLASLVEKYLADHDTEGLDIQILSPVE 519 (738)
T ss_dssp EEEECTTCEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEECCTTCH---HHHHHHHHHHHHHTTSCCTTCCEEEECHHH
T ss_pred eccccCCcchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCCCc---cHHHHHHHHHHHHHhcCCCCCceEeeCHHH
Confidence 45555565566666677889999999999999876555555554322 24333334444445553 55566555 57
Q ss_pred HHHHHHHhCCCCcc-EEEcCCcchhHHHHhhhhh--cCCccc---ccccccCCCccccccCCcCcccccc------CCCc
Q psy9726 276 NCTMQIVSNPHQFD-VMVMPNLYGNIVDNLASGL--VGGAGV---VAGASWSPECVVFEPGARHTYSEAV------GKNV 343 (381)
Q Consensus 276 ~~~~~lv~~P~~fd-Vivt~Nl~GDILSDlaa~l--~GslGl---~psanig~~~a~FEp~H~GsApdia------Gk~~ 343 (381)
++-..|-+=-.+-| +=||.|..-|+|+||.--| --|-=| .|=-| +-+|||...-||||... |.=.
T Consensus 520 A~~~slerir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~---GGGLfETGAGGSAPKHVqQ~~eEnhLR 596 (738)
T 2b0t_A 520 ATQLSIDRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMA---GGGLFETGAGGSAPKHVQQVQEENHLR 596 (738)
T ss_dssp HHHHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSCEEEEEBTT---SCEEEECCSSCCCHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhccccc---CCccccCCCCcCchHHHHHHHHcCccc
Confidence 77666655445556 7799999999999998743 222222 23222 34899996548999854 2236
Q ss_pred cChhHHHHHHHHHHhhcCch-------HHHHHHHHHHHHHHHcCC
Q psy9726 344 ANPTAMLLCSTKMLSHVNLQ-------YYGDMIRNAVNRVLKAGK 381 (381)
Q Consensus 344 ANP~a~Ils~ammL~hlg~~-------~~A~~i~~Av~~~l~~G~ 381 (381)
=+-+|-+|+.+-=|+||+.. --|+.|.+|..+.|++.|
T Consensus 597 WDSLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~K 641 (738)
T 2b0t_A 597 WDSLGEFLALAESFRHELNNNGNTKAGVLADALDKATEKLLNEEK 641 (738)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCCC
Confidence 67899999999999999753 337889999999988765
No 49
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=95.01 E-value=0.0041 Score=61.62 Aligned_cols=55 Identities=27% Similarity=0.484 Sum_probs=39.2
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCc--eEEEEecCCCchhH--------HHHHHHHHHHHc
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGR--TKCTLIPGDGVGPE--------LVYSVQEVFKAA 98 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~--~~IavipGDGIGpE--------V~~aa~~VL~a~ 98 (381)
-.+|++|||||||||++.++++|+++...+ ..|-.-..| +|-+ +.+++++.++..
T Consensus 12 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~-~G~~~~~~~g~~lp~~tl~~~~~~ 76 (366)
T 1vlc_A 12 HMKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGH-IGGDAIDRFGEPLPEETKKICLEA 76 (366)
T ss_dssp EEEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECC-CTHHHHHHHSSSSCHHHHHHHHHS
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHHHHHHhcCCCeEEEEEe-CCHHHHHhhCCcCCHHHHHHHHHC
Confidence 358999999999999999999999988432 345555554 4443 335666666653
No 50
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=94.99 E-value=0.025 Score=55.19 Aligned_cols=136 Identities=12% Similarity=0.149 Sum_probs=87.3
Q ss_pred eeecHHHHHHHHHHHHHHHHhCC--CCcEEEEEcCCccccccHHH-HH-------HHHHHHhhCCCeEE-eEEeHHHHHH
Q psy9726 211 KIVTAEKSRRIAKFAFDYATKNN--RKKVTAVHKANIMKLGDGLF-LN-------SCKEMAKLYPKIQF-EQMIVDNCTM 279 (381)
Q Consensus 211 ~~~Tr~~~eRiar~AFe~A~~r~--~k~Vt~v~KaNv~~~tdglf-~~-------~~~eva~eypdI~~-~~~~vD~~~~ 279 (381)
+.+|++.+.+.+|...++-++-| +-|+-+. =-|==.--+|+| +| ..++..++ +|.+ -..-.|++-.
T Consensus 180 ~~it~e~i~~~i~~~~~L~~~fgi~~PrIaV~-GLNPHAGE~G~~G~EE~~iI~PAi~~~r~~--Gi~~~GP~paDT~F~ 256 (330)
T 2hi1_A 180 DTLSTARVETVIGIADTFLKRVGYVKPRIAVA-GVNPHAGENGLFGDEETRILTPAITDARAK--GMDVYGPCPPDTVFL 256 (330)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTTCSSCEEEEE-CSSGGGSSTTSCCHHHHHTHHHHHHHHHTT--TCEEEEEECHHHHHH
T ss_pred HhcCHHHHHHHHHHHHHHHHHcCCCCCCEEEE-ecCCCCCCCCCCCHhHHHHHHHHHHHHHHC--CCceeCCCCchhhcc
Confidence 45799999999999888333233 2234332 223221113444 22 22333333 6665 5666898887
Q ss_pred HHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCC--CccccccCCcCccccccCCCccChhHHHHHHHHHH
Q psy9726 280 QIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSP--ECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKML 357 (381)
Q Consensus 280 ~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~--~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL 357 (381)
+-.+ ++||++|+ || -|++---.--+|+--+.|+-- .+---.|-| |||.||||||+|||.+++-|.-+..
T Consensus 257 ~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDH-GTAfDIAGkG~A~~~Sl~~Ai~~A~ 327 (330)
T 2hi1_A 257 QAYE--GQYDMVVA--MY----HDQGHIPLKLLGFYDGVNITAGLPFIRTSADH-GTAFDIAWTGKAKSESMAVSIKLAM 327 (330)
T ss_dssp HHHT--TSCSEEEE--SS----HHHHHHHHHHCC-CCSEEEEETSSSEEEEESC-CCCTTTTTTTCCCCHHHHHHHHHHH
T ss_pred cccc--ccCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCC-CccccccCCCCCChHHHHHHHHHHH
Confidence 6554 69999997 44 477766667777777788732 233456789 9999999999999999998876654
Q ss_pred h
Q psy9726 358 S 358 (381)
Q Consensus 358 ~ 358 (381)
+
T Consensus 328 ~ 328 (330)
T 2hi1_A 328 Q 328 (330)
T ss_dssp H
T ss_pred H
Confidence 3
No 51
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=94.98 E-value=0.003 Score=63.56 Aligned_cols=56 Identities=18% Similarity=0.256 Sum_probs=39.0
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCCC-----CceEEEEecCCCchh--------HHHHHHHHHHHHc
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVPE-----GRTKCTLIPGDGVGP--------ELVYSVQEVFKAA 98 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~~-----~~~~IavipGDGIGp--------EV~~aa~~VL~a~ 98 (381)
..++|++|||||||||++.++++|+.+.. +...|-...-| +|- -+.+++++.++..
T Consensus 23 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~-~G~~~~~~~g~~lp~etl~~~k~~ 91 (409)
T 2e0c_A 23 NKPVILYIEGDGIGPEITNAAIKVINKAVERAYGSSREIKWLEVY-AGEKAEKLVNDRFPKETQEMLLKY 91 (409)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECC-CTHHHHHHHSCSSCHHHHHHHHHH
T ss_pred CCceEeeCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEe-chHHHHHhhCCcCCHHHHHHHHHC
Confidence 45799999999999999999999998763 23455555444 232 3445566666653
No 52
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=94.94 E-value=0.0031 Score=63.85 Aligned_cols=56 Identities=25% Similarity=0.242 Sum_probs=39.2
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCCCC-----ceEEEEecCCCch--------hHHHHHHHHHHHHc
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVPEG-----RTKCTLIPGDGVG--------PELVYSVQEVFKAA 98 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~~~-----~~~IavipGDGIG--------pEV~~aa~~VL~a~ 98 (381)
..++|++|||||||||++.++++|+.+... ...|-...-| +| .-+.+++++.++..
T Consensus 34 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~-~G~~~~~~~G~~lp~etl~~~k~~ 102 (435)
T 1tyo_A 34 DNPVVAFIRGDGVGPEVVESALKVVDAAVKKVYGGSRRIVWWELL-AGHLAREKCGELLPKATLEGIRLA 102 (435)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECC-CSHHHHHHHSSSSCHHHHHHHHHH
T ss_pred CCCEEEEECCCCcCHHHHHHHHHHHHHHHHhhcCCCcceEEEEEe-chHHHHHhhCCcCCHHHHHHHHhC
Confidence 457999999999999999999999987632 2455554443 22 23445666666653
No 53
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=94.86 E-value=0.0033 Score=63.52 Aligned_cols=28 Identities=18% Similarity=0.380 Sum_probs=25.8
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCC
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVP 69 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~ 69 (381)
..++|++|||||||||++.++++|+.+.
T Consensus 25 ~~~~I~vipGDGIGpEV~~aa~~Vl~a~ 52 (429)
T 2d4v_A 25 DQPIIPFIEGDGIGCDVTPAMRSVVDAA 52 (429)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 4579999999999999999999999876
No 54
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=94.78 E-value=0.0051 Score=62.15 Aligned_cols=56 Identities=11% Similarity=0.115 Sum_probs=40.9
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCceEEEEec-C----CCchhHHHHHHHHHHHHc
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIP-G----DGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavip-G----DGIGpEV~~aa~~VL~a~ 98 (381)
.++|++|||||||||++.++++++.+++-....-..+ | |--|..+.+++++.++..
T Consensus 30 ~~~I~vipGDGIGpEI~~~~~~vL~~~~~~i~~~~~~~G~~~~~~tg~~lp~etl~aik~~ 90 (427)
T 3us8_A 30 ANPVVELDGDEMTRIIWQFIKDKLIHPYLDLDLEYYDLGVENRDATDDQVTIDAANAIKKH 90 (427)
T ss_dssp CSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHH
T ss_pred cceEEEEcCCcccHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHC
Confidence 5789999999999999999999999876543333222 2 223556777888877764
No 55
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=94.43 E-value=0.0049 Score=62.22 Aligned_cols=56 Identities=21% Similarity=0.287 Sum_probs=38.9
Q ss_pred CceEEEeeCCCCCCcceeeeccccccCC-----CCceEEEEecCCCch--------hHHHHHHHHHHHHc
Q psy9726 42 GRTKCTLIPGDGVGPELVYSVQEHQSVP-----EGRTKCTLIPGDGVG--------PELVYSVQEVFKAA 98 (381)
Q Consensus 42 ~~~~vt~~pg~gigpe~~~~~~~vfsa~-----~~~~~IavipGDGIG--------pEV~~aa~~VL~a~ 98 (381)
..++|++|||||||||++.++++|+.+. ++...|-...-| +| .-+.+++++.++..
T Consensus 18 ~~~~I~vipGDGIGpEI~~~a~~Vl~a~~~~~~~~~~~i~~~~~~-~G~~~~~~~g~~lp~etl~~~k~~ 86 (423)
T 1hqs_A 18 NNPIIPFIEGDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVY-AGEKAYNKTGEWLPAETLDVIREY 86 (423)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECC-CTHHHHHHHSCSSCHHHHHHHHHH
T ss_pred CCCEEEEECCCCcCHHHHHHHHHHHHHHHhhhcCCCCceEEEEEe-cCHHHHHhhCCcCcHHHHHHHHHC
Confidence 4579999999999999999999999876 323455554433 23 23445666666653
No 56
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=93.54 E-value=0.011 Score=59.28 Aligned_cols=56 Identities=16% Similarity=0.177 Sum_probs=42.0
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCceEEEEec-C----CCchhHHHHHHHHHHHHc
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIP-G----DGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavip-G----DGIGpEV~~aa~~VL~a~ 98 (381)
.++|+++||||||||++.++++++.+++-....-..+ | |--|--+.+++++.++..
T Consensus 6 ~~~i~~i~GDgig~ei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~~k~~ 66 (402)
T 2uxq_A 6 KTPLVELDGDEMTRVLWPLIKDKLLLPFIDLQTEYYDLGIEERDRTNDQITIDAAEAIKKY 66 (402)
T ss_dssp SSCEEEEECCHHHHHHHHHHHHHHTTTTBCCCEEEEECSHHHHHHTTTHHHHHHHHHHHHH
T ss_pred ecceEEecCCCccHHHHHHHHHHHHhCCCCeEEEEEecCHHHHHhhCCcCCHHHHHHHHhC
Confidence 3689999999999999999999999997654443333 2 123556777887777764
No 57
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=93.23 E-value=0.047 Score=53.64 Aligned_cols=133 Identities=15% Similarity=0.095 Sum_probs=78.4
Q ss_pred eeecHHHHHHHHHHHHHHHHhCCCC--cEEEEEcCCccccccHHH-HH-------HHHHHHhhCCCeEE-eEEeHHHHHH
Q psy9726 211 KIVTAEKSRRIAKFAFDYATKNNRK--KVTAVHKANIMKLGDGLF-LN-------SCKEMAKLYPKIQF-EQMIVDNCTM 279 (381)
Q Consensus 211 ~~~Tr~~~eRiar~AFe~A~~r~~k--~Vt~v~KaNv~~~tdglf-~~-------~~~eva~eypdI~~-~~~~vD~~~~ 279 (381)
+.+|.+.+.+.++...+.-++.+.+ |+-+. ==|==.--+|+| +| +.++..++ ++.+ -..-.|++-
T Consensus 195 ~~It~~~I~~~i~~~~~~l~~fgi~~PrIaV~-GLNPHaGE~G~~G~EE~~iI~Pai~~l~~~--gi~v~GP~paDt~F- 270 (349)
T 4aty_A 195 ARLDQRHVERAARAAVQALQLMGIAHPVVGLM-GINPHAGEGGLFGRDDIDITEPVARKLRDD--GMTVIGPQGADLLL- 270 (349)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTC-CCCCEEEE-CSSGGGGTTTTTCSHHHHTHHHHHHHHHHC---CCEEEEECHHHHT-
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCCCceEEE-ecCCCCCccccccchHHHHHHHHHHHHHHC--CCeEeCCCchhhhh-
Confidence 4568888887777766655554322 33332 112211123444 11 23333333 4433 456678775
Q ss_pred HHHhCCCCccEEEcCCcchhHHHHhhhhhcCCccccccccc--CCCccccccCCcCccccccCCCccChhHHHHHHHHHH
Q psy9726 280 QIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASW--SPECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKML 357 (381)
Q Consensus 280 ~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psani--g~~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~ammL 357 (381)
.+..||++|+ || -|++---.-.++.--+.|+ |=.+---.|-| |||-||||||+|||.+++-|.-+..
T Consensus 271 ----~~~~~D~vla--MY----HDQgl~p~K~l~f~~~vnitlGLp~iRtS~dH-Gta~diagkg~a~~~s~~~Ai~~a~ 339 (349)
T 4aty_A 271 ----TNPDIDVFVA--MY----HDQGHIPVKLRAGRHSAALSIGAGVLFSSVGH-GSGFDIAGTLLADPAPLLGAIRLVT 339 (349)
T ss_dssp ----TCTTCSEEEE--SS----HHHHHHHHHHHHTTSEEEEEESSSSEEEECCS-CCCTTSTTTTCCCCHHHHHHHHHHH
T ss_pred ----ccCCCCEEEE--cc----cccchHHHHhcccCCcEEEecCCCeeEeCCCC-ChhhhhccCCCCChHHHHHHHHHHH
Confidence 3468999988 54 4555444444555555665 32222346789 9999999999999999998887765
Q ss_pred h
Q psy9726 358 S 358 (381)
Q Consensus 358 ~ 358 (381)
.
T Consensus 340 ~ 340 (349)
T 4aty_A 340 T 340 (349)
T ss_dssp H
T ss_pred H
Confidence 4
No 58
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=93.00 E-value=0.05 Score=53.07 Aligned_cols=136 Identities=9% Similarity=0.077 Sum_probs=87.4
Q ss_pred eeecHHHHHHHHHHHHHHHHh-CC--CCcEEEEEcCCccccccHHH--------HHHHHHHHhhCCCeEE-eEEeHHHHH
Q psy9726 211 KIVTAEKSRRIAKFAFDYATK-NN--RKKVTAVHKANIMKLGDGLF--------LNSCKEMAKLYPKIQF-EQMIVDNCT 278 (381)
Q Consensus 211 ~~~Tr~~~eRiar~AFe~A~~-r~--~k~Vt~v~KaNv~~~tdglf--------~~~~~eva~eypdI~~-~~~~vD~~~ 278 (381)
+.+|.+.+.+.++...+--++ -| +-|+-+. =-|==.--+|+| .-..++..++ ++.+ -..-.|++-
T Consensus 173 ~~it~e~i~~~i~~~~~~L~~~fgi~~PrIaV~-GLNPHAGE~G~~G~EE~~iI~Pai~~~r~~--Gi~~~GP~paDT~F 249 (328)
T 1yxo_A 173 DAISDERLTRVARILHADLRDKFGIAHPRILVC-GLNPHAGEGGHLGREEIEVIEPCLERLRGE--GLDLIGPLPADTLF 249 (328)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTTCCSSCEEEEE-CSSGGGGTTTTTCSHHHHTHHHHHHHHHTT--TCEEEEEECHHHHT
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCCCEEEE-ecCCCCCCCCCCCHhHHHHHHHHHHHHHHC--CCceeCCCCchhhc
Confidence 457899999888888875544 23 2234332 223222113444 1123333333 6665 566679887
Q ss_pred HHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCC--CccccccCCcCccccccCCCccChhHHHHHHHHH
Q psy9726 279 MQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSP--ECVVFEPGARHTYSEAVGKNVANPTAMLLCSTKM 356 (381)
Q Consensus 279 ~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~--~~a~FEp~H~GsApdiaGk~~ANP~a~Ils~amm 356 (381)
.+-.+ ++||++|+ || -|++---.--+|+--+.|+-- .+---.|-| |||.||||||+|||.+++-|.-+.
T Consensus 250 ~~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDH-GTAfDIAGkG~A~~~Sl~~Ai~~A 320 (328)
T 1yxo_A 250 TPKHL--EHCDAVLA--MY----HDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDH-GTALDLAGSGRIDSGSLQVALETA 320 (328)
T ss_dssp SHHHH--TTCSEEEE--SS----HHHHHHHHHHHHTTSCEEEEESSSSCEEEECS-CCCGGGTTTCCCCCHHHHHHHHHH
T ss_pred ccccc--cCCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCC-CccccccCCCCCChHHHHHHHHHH
Confidence 66555 69999997 44 467666666777777777632 233456789 999999999999999999887665
Q ss_pred Hh
Q psy9726 357 LS 358 (381)
Q Consensus 357 L~ 358 (381)
.+
T Consensus 321 ~~ 322 (328)
T 1yxo_A 321 YQ 322 (328)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 59
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=92.42 E-value=0.021 Score=57.19 Aligned_cols=55 Identities=13% Similarity=0.174 Sum_probs=40.5
Q ss_pred eEEEeeCCCCCCcceeeeccccccCCCCceEEEEec-C----CCchhHHHHHHHHHHHHc
Q psy9726 44 TKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIP-G----DGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 44 ~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavip-G----DGIGpEV~~aa~~VL~a~ 98 (381)
++|+++||||||||++.++++++.++.-.......+ | |--|--+.+++++.++..
T Consensus 8 ~~I~~l~GDgiG~ei~~~v~~~l~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~ 67 (399)
T 1zor_A 8 NPIVELDGDEMARVMWKMIKEKLILPYLDIQLVYFDLGIKKRDETDDQITIEAAKAIKKY 67 (399)
T ss_dssp SCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHH
T ss_pred ccEEEecCCcccHHHHHHHHHHHHhCCCCeEEEEEeCCHHHHhccCCcCcHHHHHHHHHC
Confidence 579999999999999999999999887654443333 2 123445677777777764
No 60
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=91.97 E-value=0.024 Score=57.07 Aligned_cols=55 Identities=11% Similarity=0.122 Sum_probs=39.5
Q ss_pred eEEEeeCCCCCCcceeeeccccccCCCCceEEEEec-C----CCchhHHHHHHHHHHHHc
Q psy9726 44 TKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIP-G----DGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 44 ~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavip-G----DGIGpEV~~aa~~VL~a~ 98 (381)
++|+++|||||||||+.++++++..+.-.......+ | |--|--+.+++++.++..
T Consensus 9 ~~i~~l~GDgiGpei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~ 68 (413)
T 1lwd_A 9 KPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKY 68 (413)
T ss_dssp SCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHH
T ss_pred ccEEEecCCChhHHHHHHHHHHHHhCCCCeEEEEEecCHHHHhccCCcCcHHHHHHHHHC
Confidence 579999999999999999999998765443333222 2 123556777888777764
No 61
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=91.52 E-value=0.11 Score=51.38 Aligned_cols=79 Identities=13% Similarity=0.086 Sum_probs=54.6
Q ss_pred EEeHHHHHHHHHhCCCCccEEEcCCcchhHHHHhhhhhcCCcccccccccCCC--ccccccCCcCccccccCCC-ccChh
Q psy9726 271 QMIVDNCTMQIVSNPHQFDVMVMPNLYGNIVDNLASGLVGGAGVVAGASWSPE--CVVFEPGARHTYSEAVGKN-VANPT 347 (381)
Q Consensus 271 ~~~vD~~~~~lv~~P~~fdVivt~Nl~GDILSDlaa~l~GslGl~psanig~~--~a~FEp~H~GsApdiaGk~-~ANP~ 347 (381)
..-.|++-.+-.+ ++||.+|+ || -|++---.--+|+--+.|+--+ .---.|-| |||.|||||| +|||.
T Consensus 281 P~paDT~F~~~~~--~~~D~vlA--MY----HDQGliplK~l~F~~gVNvTlGLP~IRTSvDH-GTAfDIAGkG~~Ad~~ 351 (367)
T 3tsn_A 281 PLVADTAFTKTGL--KNCNRLVA--MY----HDLALAPLKALYFDKSINVSLNLPIIRVSVDH-GTAFDKAYKNAKINTK 351 (367)
T ss_dssp CBCHHHHTSHHHH--HHCCEEEE--SS----HHHHHHHHHHHCTTTCEEEEESSSSCEEECCC-CSCTTSCSSCCCCCCH
T ss_pred CcCchhhhccchh--cCCCEEEE--cc----ccCcchhhhhcccCccEEEecCCCeeeecCCC-CcchhhcCCCCcCChH
Confidence 3445766544333 68999888 44 4666555566666667776322 22346789 9999999999 99999
Q ss_pred HHHHHHHHHHh
Q psy9726 348 AMLLCSTKMLS 358 (381)
Q Consensus 348 a~Ils~ammL~ 358 (381)
+++-|.-+..+
T Consensus 352 Sl~~Ai~~A~~ 362 (367)
T 3tsn_A 352 SYFEAAKFAIN 362 (367)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988876544
No 62
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=89.23 E-value=0.064 Score=53.74 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=41.6
Q ss_pred eEEEeeCCCCCCcceeeeccccccCCCCceEEEEec-C----CCchhHHHHHHHHHHHHc
Q psy9726 44 TKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIP-G----DGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 44 ~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavip-G----DGIGpEV~~aa~~VL~a~ 98 (381)
++||++||||||||++..+++++.+++-....-... | |-.|..+.+++++.++..
T Consensus 8 ~~i~~i~GDei~~e~~~~i~~v~~~~~~~i~~~~~d~G~~~~~~tg~~lp~etl~aik~~ 67 (402)
T 4aoy_A 8 VPLVEMDGDEMTRIIWRLIKENLLEPYIELNTEYYDLGLENRDKTEDQVTIDAARAIQKY 67 (402)
T ss_dssp SCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHHTTHHHHHHHHHHHHH
T ss_pred CcEEEECCCchHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHC
Confidence 689999999999999999999999988764433332 2 224556778887777764
No 63
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4
Probab=82.99 E-value=7.3 Score=37.83 Aligned_cols=146 Identities=16% Similarity=0.142 Sum_probs=82.5
Q ss_pred ecHHHHHHHHHHHHHHHHh-CCC--CcEEEEEcCCccc---cccHHHHHHHHHHHhhCCCeEEe-EEeHHHHHHHHHhCC
Q psy9726 213 VTAEKSRRIAKFAFDYATK-NNR--KKVTAVHKANIMK---LGDGLFLNSCKEMAKLYPKIQFE-QMIVDNCTMQIVSNP 285 (381)
Q Consensus 213 ~Tr~~~eRiar~AFe~A~~-r~~--k~Vt~v~KaNv~~---~tdglf~~~~~eva~eypdI~~~-~~~vD~~~~~lv~~P 285 (381)
.|.+...++++.+-++|++ -|. -||-+. |+-. .....-++.++...++ |++.++ .+--|+...
T Consensus 148 ~~~e~L~~~a~~~~~~a~~~~Gi~~PrValL---N~Ge~~~~g~e~i~~A~~ll~~~-~~i~~~G~ve~d~~~~------ 217 (345)
T 1vi1_A 148 AKPEHLVQYAIMGSVYSQQVRGVTSPRVGLL---NVGTEDKKGNELTKQTFQILKET-ANINFIGNVEARDLLD------ 217 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSCCSSCEEEEE---ESSSSTTCSCHHHHHHHHHHHSC-TTSEEEEEEEGGGGGG------
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCCCeEEEE---eCCCCCCCCCHHHHHHHHHHhcC-CCCeEEeccCCCcccc------
Confidence 4788899999999999988 443 357776 4321 1223444444444434 777764 455665543
Q ss_pred CCccEEEcCCcc-hhHHHHhh----------------hhhcCCcccc---cccccCCCcccccc-CCcCccc-------c
Q psy9726 286 HQFDVMVMPNLY-GNIVDNLA----------------SGLVGGAGVV---AGASWSPECVVFEP-GARHTYS-------E 337 (381)
Q Consensus 286 ~~fdVivt~Nl~-GDILSDla----------------a~l~GslGl~---psanig~~~a~FEp-~H~GsAp-------d 337 (381)
+.+||+|| ++| |+|.-=.. .++.+.+|+. |... .-..-+.+ .| |+|+ +
T Consensus 218 G~aDVvV~-d~~~GNI~lK~~eg~~~~~~~~~k~~f~~~~~~~lg~~l~~P~l~--~~~~~~d~~~~-gga~llG~~~pv 293 (345)
T 1vi1_A 218 DVADVVVT-DGFTGNVTLKTLEGSALSIFKMMRDVMTSTLTSKLAAAVLKPKLK--EMKMKMEYSNY-GGASLFGLKAPV 293 (345)
T ss_dssp TSCSEEEC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-------CCHHHHH--HHHHHHCGGGS-CCEEEETBSSCE
T ss_pred CCCCEEEe-CchhhhHHHHHHHhhhhhhHHHHHHHhhcchhhhhhhhhccchHH--HHHhcCCcccc-ccceeecCCccE
Confidence 89999998 666 88855444 1122222221 1110 00001112 26 7777 7
Q ss_pred ccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHH
Q psy9726 338 AVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAV 373 (381)
Q Consensus 338 iaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av 373 (381)
+++++.+|+-+++.|.++...... ...-+.|++++
T Consensus 294 i~~~g~a~~~~i~~ai~~A~~~a~-~~~~~~i~~~~ 328 (345)
T 1vi1_A 294 IKAHGSSDSNAVFRAIRQAREMVS-QNVAALIQEEV 328 (345)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHH-TTHHHHHHHHT
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHH-cCHHHHHHHHH
Confidence 999999999999888876654432 22344444444
No 64
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=80.02 E-value=0.26 Score=49.68 Aligned_cols=56 Identities=11% Similarity=0.135 Sum_probs=37.6
Q ss_pred ceEEEeeCCCCCCcceeeeccccccCCCCceEEEEec-C----CCchhHHHHHHHHHHHHc
Q psy9726 43 RTKCTLIPGDGVGPELVYSVQEHQSVPEGRTKCTLIP-G----DGVGPELVYSVQEVFKAA 98 (381)
Q Consensus 43 ~~~vt~~pg~gigpe~~~~~~~vfsa~~~~~~Iavip-G----DGIGpEV~~aa~~VL~a~ 98 (381)
.++|+++||||||||+..++++.+...+-....-..+ | |--|--+.+++++.++..
T Consensus 22 ~~~I~~l~GDgig~evl~~~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~et~~ai~~~ 82 (427)
T 2qfy_A 22 KQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKY 82 (427)
T ss_dssp SSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHH
T ss_pred eeeEEEecCCCHHHHHHHHHHHHhccCCCceEEEEEecChHHHhccCCcCcHHHHHHHHHC
Confidence 4689999999999999999998664444333322222 2 123556777777777764
No 65
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C*
Probab=73.29 E-value=12 Score=36.09 Aligned_cols=99 Identities=23% Similarity=0.274 Sum_probs=65.3
Q ss_pred eecHHHHHHHHHHHHHHHHh-CC-CCcEEEEEcCCcc--c-cccHHHHHHHHHHHhhCCCeEEe-EEeHHHHHHHHHh--
Q psy9726 212 IVTAEKSRRIAKFAFDYATK-NN-RKKVTAVHKANIM--K-LGDGLFLNSCKEMAKLYPKIQFE-QMIVDNCTMQIVS-- 283 (381)
Q Consensus 212 ~~Tr~~~eRiar~AFe~A~~-r~-~k~Vt~v~KaNv~--~-~tdglf~~~~~eva~eypdI~~~-~~~vD~~~~~lv~-- 283 (381)
-.|.+...++++.+-++|++ -| .-||-+..=.+-- + .....-++.++.+.+++|++.++ ++-.|++...=+.
T Consensus 177 ~pt~e~l~~ia~~~~~~~~~~~Gi~PrVAlLs~ge~g~~~~~~~~~v~~A~~ll~~~~~~~~v~Gpl~~D~a~~~~~~~~ 256 (333)
T 2af4_C 177 MPSVEDVANIAVISAKTFELLVQDVPKVAMLSYSTKGSAKSKLTEATIASTKLAQELAPDIAIDGELQVDAAIVPKVAAS 256 (333)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCSCCEEEEECSCSTTSCCSHHHHHHHHHHHHHHHHCTTSEEEEEECHHHHHCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCCCCCCCcHHHHHHHHHHhccCCCcEEEecCcHHHhcCHHHHHh
Confidence 34788888999999999987 33 2356665421111 1 01123445555455678998775 5668988766555
Q ss_pred ----CC--CCccEEEcCCcc-hhHHHHhhhhhcC
Q psy9726 284 ----NP--HQFDVMVMPNLY-GNIVDNLASGLVG 310 (381)
Q Consensus 284 ----~P--~~fdVivt~Nl~-GDILSDlaa~l~G 310 (381)
++ +.+||+|++|+| |+|.-=+..-+.|
T Consensus 257 k~~~s~~~G~aDvlV~pd~d~GNI~~K~l~~~~~ 290 (333)
T 2af4_C 257 KAPGSPVAGKANVFIFPDLNCGNIAYKIAQRLAK 290 (333)
T ss_dssp HSTTCSSTTSCCEEECSSHHHHHHHHHHHHHTSC
T ss_pred cCCCCccCCcCCEEEECCchHHHHHHHHHHHccC
Confidence 55 789999999999 9998777654443
No 66
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=72.03 E-value=29 Score=33.17 Aligned_cols=100 Identities=18% Similarity=0.126 Sum_probs=66.2
Q ss_pred eecHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCCccccccHH---HHHHHHHHHhhCCCeEEe-EEeHHHHHHHHHh---
Q psy9726 212 IVTAEKSRRIAKFAFDYATKNN-RKKVTAVHKANIMKLGDGL---FLNSCKEMAKLYPKIQFE-QMIVDNCTMQIVS--- 283 (381)
Q Consensus 212 ~~Tr~~~eRiar~AFe~A~~r~-~k~Vt~v~KaNv~~~tdgl---f~~~~~eva~eypdI~~~-~~~vD~~~~~lv~--- 283 (381)
-.|.+...++++.+-+++++-| .-||-+..=.+.-.....- -++.++.+.+++|++.++ .+-.|++...-+.
T Consensus 182 ~~t~e~l~~ia~~~~~~~~~~Gi~PrVAlLs~~~~G~e~~~~~~~i~~A~~llk~~~~~~~v~Gpl~~D~a~~~~~~~~k 261 (337)
T 1r5j_A 182 DPTAQELAEIAVNTAETAKIFDIDPKIAMLSFSTKGSGKAPQVDKVREATEIATGLNPDLALDGELQFDAAFVPETAAIK 261 (337)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCCEEEECSCSTTSSCSHHHHHHHHHHHHHHHHCTTSCEEEEECHHHHHCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCccCCCCCCCcHHHHHHHHHHhccCCCcEEEecCcHHHhcCHHHHHhh
Confidence 3488889999999999998744 2356665322222111112 455555556788988765 4558888644443
Q ss_pred ---CC--CCccEEEcCCcc-hhHHHHhhhhhcCC
Q psy9726 284 ---NP--HQFDVMVMPNLY-GNIVDNLASGLVGG 311 (381)
Q Consensus 284 ---~P--~~fdVivt~Nl~-GDILSDlaa~l~Gs 311 (381)
+| +.+||+|++|++ |+|.-=+..-+.|.
T Consensus 262 ~~~s~~~G~aDvlv~p~~d~GnI~~K~l~~~~~~ 295 (337)
T 1r5j_A 262 APDSAVAGQANTFVFPDLQSGNIGYKIAQRLGMF 295 (337)
T ss_dssp SCSCSSTTCCCEEECSSHHHHHHHHHHHHHTTCC
T ss_pred CCCCccCCCCCEEEECChHHHHHHHHHHHHhcCC
Confidence 22 789999999999 99988777765544
No 67
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structura genomics, JCSG, protein structure initiative, PSI, joint CE structural genomics; 2.32A {Escherichia coli} SCOP: c.77.1.5
Probab=70.80 E-value=9.9 Score=37.01 Aligned_cols=97 Identities=22% Similarity=0.223 Sum_probs=64.3
Q ss_pred ecHHHHHHHHHHHHHHHHhC-C-CCcEEEEEcCC---c-cccccHHHHHHHHHHHhhCCCeEEe-EEeHHHHHHHHHh--
Q psy9726 213 VTAEKSRRIAKFAFDYATKN-N-RKKVTAVHKAN---I-MKLGDGLFLNSCKEMAKLYPKIQFE-QMIVDNCTMQIVS-- 283 (381)
Q Consensus 213 ~Tr~~~eRiar~AFe~A~~r-~-~k~Vt~v~KaN---v-~~~tdglf~~~~~eva~eypdI~~~-~~~vD~~~~~lv~-- 283 (381)
.|.+....|++.+-++|++- | .-||-+..=.+ . ++. ...-++.++...+++|++.++ ++-.|++...=+.
T Consensus 185 pt~e~l~~ia~~a~~~a~~~~Gi~PrVAlLs~ge~Gs~~~~~-~~~i~~A~~llk~~~~~~~v~Gpl~~D~A~~~~~~~~ 263 (355)
T 1vmi_A 185 PTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPC-VANVQQATEIVRERAPKLVVDGELQFDAAFVPEVAAQ 263 (355)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHSSCCEEEEECSCSTTSSCSHH-HHHHHHHHHHHHHHCTTSEEEEEECHHHHHCHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCCCCCCCcc-HHHHHHHHHHHhccCCCCEEEeCCChHHhhCHHHHhh
Confidence 37888889999999999874 4 23566664222 1 111 123344555445678988765 5558887755554
Q ss_pred ----CC--CCccEEEcCCcc-hhHHHHhhhhhcC
Q psy9726 284 ----NP--HQFDVMVMPNLY-GNIVDNLASGLVG 310 (381)
Q Consensus 284 ----~P--~~fdVivt~Nl~-GDILSDlaa~l~G 310 (381)
++ +.+||+|++|+| |+|.-=+...+.|
T Consensus 264 k~~~s~~~G~aDvlV~Pd~d~GNI~~K~l~~~~~ 297 (355)
T 1vmi_A 264 KAPASPLQGKANVMVFPSLEAGNIGYKIAQRLGG 297 (355)
T ss_dssp HCTTCTTTTCCSEEECSSHHHHHHHHHHHHHHHC
T ss_pred cCCCCccCCCCCEEEECChhHHhHHHHHHHHccC
Confidence 44 689999999999 9998777655443
No 68
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=67.47 E-value=19 Score=34.53 Aligned_cols=100 Identities=18% Similarity=0.154 Sum_probs=66.1
Q ss_pred eecHHHHHHHHHHHHHHHHhCC-CCcEEEEEcCC-cc-c-cccHHHHHHHHHHHhhCCCeEEe-EEeHHHHHHHHHh---
Q psy9726 212 IVTAEKSRRIAKFAFDYATKNN-RKKVTAVHKAN-IM-K-LGDGLFLNSCKEMAKLYPKIQFE-QMIVDNCTMQIVS--- 283 (381)
Q Consensus 212 ~~Tr~~~eRiar~AFe~A~~r~-~k~Vt~v~KaN-v~-~-~tdglf~~~~~eva~eypdI~~~-~~~vD~~~~~lv~--- 283 (381)
-.|.+...++++.+-+++++-| .-||-+..=.+ .. . .....-++.++.+.+++|++.++ .+-.|++...=+.
T Consensus 178 ~pt~e~l~~ia~~~~~~~~~~Gi~PrVAlLs~ge~G~~~~~~~~~i~~A~~ll~~~~~~~~v~Gpl~~D~a~~~~~~~~k 257 (329)
T 1td9_A 178 APDSQDLAEIAIESANTAKMFDIEPRVAMLSFSTKGSAKSDETEKVADAVKIAKEKAPELTLDGEFQFDAAFVPSVAEKK 257 (329)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTTCCCCEEEECSSSTTSSCSHHHHHHHHHHHHHHHHCTTSCEEEEECHHHHHCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHcCCCCeEEEEeCccCCCCCCCchHHHHHHHHHHHhhCCCCEEEeCCcHHHHcCHHHHHhh
Confidence 4478889999999999998744 23566664111 11 1 01113455555555678988775 5668988766554
Q ss_pred ---CC--CCccEEEcCCcc-hhHHHHhhhhhcCC
Q psy9726 284 ---NP--HQFDVMVMPNLY-GNIVDNLASGLVGG 311 (381)
Q Consensus 284 ---~P--~~fdVivt~Nl~-GDILSDlaa~l~Gs 311 (381)
++ +.+||+|++|+| |+|.-=+..-+.|.
T Consensus 258 ~~~s~~~G~aDvlV~pd~d~GNI~~K~l~~~~~~ 291 (329)
T 1td9_A 258 APDSEIKGDANVFVFPSLEAGNIGYKIAQRLGNF 291 (329)
T ss_dssp CTTSSCSSCCSEEECSSHHHHHHHHHHHHHTTTC
T ss_pred CCCCccCCCCCEEEECChhHHHHHHHHHHHhcCC
Confidence 33 689999999999 99988776555443
No 69
>1yco_A Branched-chain phosphotransacylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.40A {Enterococcus faecalis}
Probab=63.98 E-value=55 Score=30.64 Aligned_cols=95 Identities=16% Similarity=0.060 Sum_probs=61.3
Q ss_pred cHHHHHHHHHHHHHHHHhCCC--CcEEEEE---cCCccccccHHHHHHHHHH--HhhCCCeEEe-EEeHHHHHHHHHh--
Q psy9726 214 TAEKSRRIAKFAFDYATKNNR--KKVTAVH---KANIMKLGDGLFLNSCKEM--AKLYPKIQFE-QMIVDNCTMQIVS-- 283 (381)
Q Consensus 214 Tr~~~eRiar~AFe~A~~r~~--k~Vt~v~---KaNv~~~tdglf~~~~~ev--a~eypdI~~~-~~~vD~~~~~lv~-- 283 (381)
|.+....|+..|-++|+.-|- -||-+.. |.|- ....-++..+-+ .++.|++.++ ++..|++.-.=++
T Consensus 126 ~~e~l~~ia~~a~~~a~~lGi~~PkVAlLs~~~~g~~---~~~~~~~a~~l~k~l~~~~~~~~dG~i~~D~A~~~~~~~~ 202 (279)
T 1yco_A 126 TQATLIEIVENAKEVAQKLGLHHPKIALLSAAENFNP---KMPSSVLAKEVTAHFNDQQEATVFGPLSLDLATSEEAVAH 202 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSSCEEEEECSCSSCCT---TCHHHHHHHHHHHHHSSCSSCEEEEEECHHHHHCHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCeEEEEeccccCCC---CChHHHHHHHHHHHHHhCCCCEEEeeCcHHhhcCHHHHHh
Confidence 467778889999999988654 3566553 4442 112333333221 2234887764 5557877644444
Q ss_pred ----CC--CCccEEEcCCcc-hhHHHHhhhhhcCC
Q psy9726 284 ----NP--HQFDVMVMPNLY-GNIVDNLASGLVGG 311 (381)
Q Consensus 284 ----~P--~~fdVivt~Nl~-GDILSDlaa~l~Gs 311 (381)
++ +.-||+|+||+| |+|+-=+.-.+.|+
T Consensus 203 k~~~s~~~G~adVlV~Pd~~aGNi~~K~~~~~~~~ 237 (279)
T 1yco_A 203 KRYSGPIMGDADILVVPTIDVGNCLYKSLTLFGHA 237 (279)
T ss_dssp TTCCSSCSSCCSEEECSSHHHHHHHHHHHHHHSCC
T ss_pred cCCCCccCCCCCEEEECCchHHHHHHHHHHHhCCC
Confidence 54 578999999998 99988888766655
No 70
>1u7n_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, enterococcus faecalis V583, PSI, protein structure initiative; HET: MSE; 2.26A {Enterococcus faecalis} SCOP: c.77.1.4
Probab=63.51 E-value=37 Score=32.61 Aligned_cols=145 Identities=16% Similarity=0.085 Sum_probs=79.1
Q ss_pred cHHHHHHHHHHHHHHHHh-CCC--CcEEEEEcCCcccc---ccHHHHHHHHHHHhhCCCeEEe-EEeHHHHHHHHHhCCC
Q psy9726 214 TAEKSRRIAKFAFDYATK-NNR--KKVTAVHKANIMKL---GDGLFLNSCKEMAKLYPKIQFE-QMIVDNCTMQIVSNPH 286 (381)
Q Consensus 214 Tr~~~eRiar~AFe~A~~-r~~--k~Vt~v~KaNv~~~---tdglf~~~~~eva~eypdI~~~-~~~vD~~~~~lv~~P~ 286 (381)
|.+...++++.+-++|++ -|. -||-+. |+-.. ....-++.++...++ |++.++ .+--|+... +
T Consensus 151 ~~e~L~~~a~~~~~~a~~~~Gi~~PrValL---N~Ge~~~~g~e~v~~A~~ll~~~-~~i~~~G~ve~d~~~~------g 220 (336)
T 1u7n_A 151 KPEHLVQYAVLGSFYAEKVRNVQNPRVGLL---NNGTEETKGSELTKKAFELLAAD-ETINFVGNVEARELLN------G 220 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCSSCCEEEE---CSCC----CCHHHHHHHHHHHHC-TTSCEEEEECGGGGGG------C
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCCCeEEEE---eCcCCCCCCCHHHHHHHHHHhcC-CCCeEEeccCCCcccc------C
Confidence 667777777777799988 442 357776 54211 122334444433344 777664 444564443 7
Q ss_pred CccEEEcCCcc-hhHHHHhhh------------hh-----cCCcccc---cccccCCCcccccc-CCcCccc-------c
Q psy9726 287 QFDVMVMPNLY-GNIVDNLAS------------GL-----VGGAGVV---AGASWSPECVVFEP-GARHTYS-------E 337 (381)
Q Consensus 287 ~fdVivt~Nl~-GDILSDlaa------------~l-----~GslGl~---psanig~~~a~FEp-~H~GsAp-------d 337 (381)
.+||+|| ++| |+|.-=..- .+ .+.+|+. |+-. .-..-+.| .| |+|+ +
T Consensus 221 ~~DvvV~-d~~~GNi~lK~~eg~~~~~~~~~k~~f~~~~~~~~lg~~li~~~l~--~l~~~~d~~~~-gga~llG~~~pv 296 (336)
T 1u7n_A 221 VADVVVT-DGFTGNAVLKSIEGTAMNMMSLLKTAILSEGVKGKMGALLLKNALH--GMKDEMDYSKH-GGAVLFGLKAPV 296 (336)
T ss_dssp SCSEEEC-CHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHH--HHHHHTCGGGG-CCEEEETBSSCE
T ss_pred CCCEEEe-CcchhhHHHHHHHhhHHHHHHHHHHHhccCCchhhhhhhhhhhhHH--HHHhccCcccc-ccceeecCcCcE
Confidence 8999998 555 888654441 11 1122210 1000 00000111 46 7777 7
Q ss_pred ccCCCccChhHHHHHHHHHHhhcCchHHHHHHHHHH
Q psy9726 338 AVGKNVANPTAMLLCSTKMLSHVNLQYYGDMIRNAV 373 (381)
Q Consensus 338 iaGk~~ANP~a~Ils~ammL~hlg~~~~A~~i~~Av 373 (381)
+++++.+|+-+++.|..+..+... ..--+.|++++
T Consensus 297 i~~~g~a~~~~i~~ai~~A~~~a~-~~~~~~i~~~~ 331 (336)
T 1u7n_A 297 IKTHGATGPDAVRYTIRQIHTMLE-TQVVPQLVEYY 331 (336)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHHH-TTHHHHHHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 999999999999888876654421 22244444444
No 71
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=63.32 E-value=25 Score=27.92 Aligned_cols=69 Identities=16% Similarity=0.204 Sum_probs=46.4
Q ss_pred ceEEEEecCCCchhHHH-HHHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHHHhcCcEEEecccCCCCCCCcccc
Q psy9726 72 RTKCTLIPGDGVGPELV-YSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGVLSTPDYSHTGELQ 150 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~-~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i~~~daiL~G~v~~p~~~~~~~~~ 150 (381)
..+|.+..|.|++-.++ ....++++.-|.+++.+...++... +.+.++|++|.||-. +
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~-----------~~~~~~Dvil~~pqv----------~ 61 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAG-----------EKGQNADVVLLGPQI----------A 61 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEECSSSTT-----------HHHHHCSEEEECTTS----------G
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEecHHHHH-----------hhccCCCEEEEccch----------h
Confidence 35899999999988754 4445666667888887776665531 235679999987732 2
Q ss_pred hhhHHHHHhhc
Q psy9726 151 TLNMKLRKALD 161 (381)
Q Consensus 151 s~~~~LR~~ld 161 (381)
...-.+++.++
T Consensus 62 ~~~~~~~~~~~ 72 (106)
T 1e2b_A 62 YMLPEIQRLLP 72 (106)
T ss_dssp GGHHHHHHHSS
T ss_pred hhHHHHHHHhc
Confidence 33456666664
No 72
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=60.22 E-value=19 Score=32.22 Aligned_cols=73 Identities=7% Similarity=0.026 Sum_probs=41.5
Q ss_pred HHHHHHHHh--CCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeE-EeEEeH-------H---HHHHHHHh-CCC--
Q psy9726 223 KFAFDYATK--NNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQ-FEQMIV-------D---NCTMQIVS-NPH-- 286 (381)
Q Consensus 223 r~AFe~A~~--r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~-~~~~~v-------D---~~~~~lv~-~P~-- 286 (381)
+.|.++..+ +|.++|-++.-..-.. +.....+-+++..+++|+++ ++..++ + .++.++++ +|.
T Consensus 112 ~~~~~~l~~~~~g~~~i~~i~~~~~~~-~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 190 (291)
T 3l49_A 112 AELALQMVADLGGKGNVLVFNGFYSVP-VCKIRYDQMKYVLEAFPDVKIIEPELRDVIPNTIQSAYSNVTDMLTKYPNEG 190 (291)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSCTTSH-HHHHHHHHHHHHHHTCTTEEECSSCBCCCSSSHHHHHHHHHHHHHHHCCSTT
T ss_pred HHHHHHHHHHcCCCceEEEEeCCCCCc-hHHHHHHHHHHHHHHCCCCEEEeeeccCCCCCCHHHHHHHHHHHHHhCCCcC
Confidence 344444444 5677888885332221 22344556677778888887 343321 1 23455555 453
Q ss_pred CccEEEcCCc
Q psy9726 287 QFDVMVMPNL 296 (381)
Q Consensus 287 ~fdVivt~Nl 296 (381)
.+|.|+|.|-
T Consensus 191 ~~~ai~~~~d 200 (291)
T 3l49_A 191 DVGAIWACWD 200 (291)
T ss_dssp SCCEEEESSH
T ss_pred CcCEEEECCC
Confidence 8999999873
No 73
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=52.17 E-value=1.4e+02 Score=27.10 Aligned_cols=94 Identities=20% Similarity=0.241 Sum_probs=49.9
Q ss_pred HHHHHHHHhcCcEEEecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCCCccEEEeccCCCceeecccc
Q psy9726 121 ETVADSIARNGICLKGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEH 200 (381)
Q Consensus 121 ~etl~~i~~~daiL~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~iDivIvREnteG~Y~g~e~ 200 (381)
++.++.++++|.++.|.-+...... .-..|.-..+=+. -+.+++|++...... .+
T Consensus 114 ~~I~~~a~~~DliV~G~~g~~~~~~-~~~Gs~~~~vl~~--------------------~~~PVlvv~~~~~~~----~~ 168 (309)
T 3cis_A 114 PTLVDMSKDAVLMVVGCLGSGRWPG-RLLGSVSSGLLRH--------------------AHCPVVIIHDEDSVM----PH 168 (309)
T ss_dssp HHHHHHGGGEEEEEEESSCTTCCTT-CCSCHHHHHHHHH--------------------CSSCEEEECTTCCCS----CS
T ss_pred HHHHHHhcCCCEEEECCCCCccccc-cccCcHHHHHHHh--------------------CCCCEEEEcCCcccC----CC
Confidence 5566777899999999876432110 0011211111111 135566666554310 00
Q ss_pred eeeCCeEeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEc
Q psy9726 201 ECVPGVVECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHK 242 (381)
Q Consensus 201 ~~~~~va~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~K 242 (381)
.....+...+.- ...+++.+++|+++|+..+ .+|+++|=
T Consensus 169 ~~~~~Ilv~~D~--s~~s~~al~~a~~la~~~~-a~l~ll~v 207 (309)
T 3cis_A 169 PQQAPVLVGVDG--SSASELATAIAFDEASRRN-VDLVALHA 207 (309)
T ss_dssp SCCCCEEEECCS--SHHHHHHHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCCCeEEEEeCC--ChHHHHHHHHHHHHHHhcC-CEEEEEEE
Confidence 011123332221 3457899999999998863 57888873
No 74
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=51.18 E-value=31 Score=30.31 Aligned_cols=81 Identities=7% Similarity=0.037 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH--------HHHHHHHHhCCC
Q psy9726 215 AEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV--------DNCTMQIVSNPH 286 (381)
Q Consensus 215 r~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v--------D~~~~~lv~~P~ 286 (381)
+.+.+..+++..+...++|.++|-++.-..-.. +.....+-+++..+++|++++..... -.++.++++...
T Consensus 108 ~~~g~~~~~~l~~~~~~~G~~~i~~i~~~~~~~-~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 186 (276)
T 3ksm_A 108 YAAGQLAARALLATLDLSKERNIALLRLRAGNA-STDQREQGFLDVLRKHDKIRIIAAPYAGDDRGAARSEMLRLLKETP 186 (276)
T ss_dssp HHHHHHHHHHHHHHSCTTSCEEEEECBCCTTCH-HHHHHHHHHHHHHTTCTTEEEEECCBCCSSHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhcCcCCCceEEEEEcCCCch-hHHHHHHHHHHHHHhCCCcEEEEEecCCCcHHHHHHHHHHHHHhCC
Confidence 334444444443332111677888775332221 22345556777678889888654321 134456666556
Q ss_pred CccEEEcCCc
Q psy9726 287 QFDVMVMPNL 296 (381)
Q Consensus 287 ~fdVivt~Nl 296 (381)
.+|.|+|.|=
T Consensus 187 ~~~ai~~~~d 196 (276)
T 3ksm_A 187 TIDGLFTPNE 196 (276)
T ss_dssp CCCEEECCSH
T ss_pred CceEEEECCc
Confidence 7899999874
No 75
>3uf6_A LMO1369 protein; structural genomics, the center for structural genomics of I diseases, csgid, unknown function, transferase; HET: COD; 1.80A {Listeria monocytogenes} PDB: 3tng_A* 3u9e_A*
Probab=50.60 E-value=95 Score=29.20 Aligned_cols=202 Identities=12% Similarity=0.150 Sum_probs=107.1
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccC------CC-----CCC-hHH---HHHHHH--hcCcEE
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNP------TM-----SAP-LET---VADSIA--RNGICL 134 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~------~~-----~~~-~~e---tl~~i~--~~daiL 134 (381)
+.||++-.|+ -+++.+++.++++. +. .+.+.+|.... .. ... ++. ....++ ++|+.+
T Consensus 18 ~kriv~~e~~--d~~vl~Aa~~a~~e-g~---~~~ILvG~~~~I~~~~~~~~eIid~~~~~~aar~a~~mV~~G~ADa~v 91 (291)
T 3uf6_A 18 SFVFAVAGAD--DEVVLETIRLALKQ-KL---GKFLLFGKKEDKTLTANESVTWIQTDTAEAAAQGAILAVKNKEADILV 91 (291)
T ss_dssp CCEEEEETCC--SHHHHHHHHHHHHT-TC---CEEEEEESSCCHHHHTSTTEEEEECCSHHHHHHHHHHHHHTTSCSEEE
T ss_pred CCeEEEeCCC--CHHHHHHHHHHHHc-CC---ceEEEEcCHHHHhhhccCCCEEECCCChHHHHHHHHHHHHCCCCCEEE
Confidence 4678777664 57888888888875 21 22344443221 00 011 221 233333 589999
Q ss_pred EecccCCCCCCCcccchhhHHHHHhhcceeecEEeeecCCCCCCCCCccEEEeccCCCceeecccceeeCCeEeeeeeec
Q psy9726 135 KGVLSTPDYSHTGELQTLNMKLRKALDLYANVVHVKSLPGVKVRHSNVDCVIIREQTEGEYSALEHECVPGVVECLKIVT 214 (381)
Q Consensus 135 ~G~v~~p~~~~~~~~~s~~~~LR~~ldlyanvRPv~~~pg~~~~~~~iDivIvREnteG~Y~g~e~~~~~~va~~~~~~T 214 (381)
+|.++| -..||..|+--..+||.+.+ ..+-++++ ...++.++= -+.+.... -|
T Consensus 92 sG~~~t------------~~~lr~~l~~~~G~r~~~~v-------s~~~~~~~-p~~~~~~~~------~D~gvN~~-P~ 144 (291)
T 3uf6_A 92 KGFIPT------------ATLMHHVLKKENGLRTDQLL-------SQIAIFDI-PTYHKPLLI------TDCAMNVA-PK 144 (291)
T ss_dssp ECSSCH------------HHHHHHHTCGGGSCCCSSCC-------EEEEEEEC-TTSSSCEEE------ECSSSCSS-CC
T ss_pred ECCCCh------------HHHHHHHhccccCCCCCcee-------eEEEEEEE-cCCCCcEEE------eeceeecC-CC
Confidence 987643 12455555433334543211 01122222 211222210 01111222 25
Q ss_pred HHHHHHHHHHHHHHHHhCCC--CcEEEE---EcCCccccccHHHHHHHHHHHhhC-CCeEEeE-EeHHHHHHHHH-----
Q psy9726 215 AEKSRRIAKFAFDYATKNNR--KKVTAV---HKANIMKLGDGLFLNSCKEMAKLY-PKIQFEQ-MIVDNCTMQIV----- 282 (381)
Q Consensus 215 r~~~eRiar~AFe~A~~r~~--k~Vt~v---~KaNv~~~tdglf~~~~~eva~ey-pdI~~~~-~~vD~~~~~lv----- 282 (381)
-+....|+..|-++|+.-|- -||-+. +|.|-. ...-++. .++.+++ |++.++- +..|++...=+
T Consensus 145 ~e~la~ia~~aa~~ar~~Gie~PkVAlLS~s~~gs~~---~~~~~~A-~~llk~~~~~~~vdGel~~D~Al~~~~~~~k~ 220 (291)
T 3uf6_A 145 TKEKIAITENALAVAHQIGITNPKIALLSAVEEVTAK---MPSTLEA-QEVVQHFGNQISVSGPLALDVAISKEAALHKG 220 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCSCCEEEECSCSSCCTT---SHHHHHH-HHHHHHHTTTSCEEEEECHHHHHCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCccCCcC---chHHHHH-HHHHHhhCCCCEEEecchHHHhcCHHHHHhhC
Confidence 67778888889999987543 256554 344421 1122233 3445554 9988775 45888754332
Q ss_pred -hCC--CCccEEEcCCcc-hhHHHHhhhhhcC
Q psy9726 283 -SNP--HQFDVMVMPNLY-GNIVDNLASGLVG 310 (381)
Q Consensus 283 -~~P--~~fdVivt~Nl~-GDILSDlaa~l~G 310 (381)
.+| ++.||+|.||+. |+|+--+...+.|
T Consensus 221 p~s~vaG~Anvli~P~l~agNi~yK~l~~~~~ 252 (291)
T 3uf6_A 221 ITDSSAGEADILIAPNIETGNALYKSLVYFAG 252 (291)
T ss_dssp CCCTTTTCCSEEECSSHHHHHHHHHHHHHHSC
T ss_pred CCCccCCCCCEEEECChHHHHHHHHHHHHhcC
Confidence 233 588999999995 9999988876654
No 76
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=46.68 E-value=41 Score=26.95 Aligned_cols=58 Identities=9% Similarity=-0.007 Sum_probs=37.3
Q ss_pred CCceEEEEecCCCchhHHHH-HHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHHHhcCcEEEecc
Q psy9726 70 EGRTKCTLIPGDGVGPELVY-SVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGVL 138 (381)
Q Consensus 70 ~~~~~IavipGDGIGpEV~~-aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i~~~daiL~G~v 138 (381)
..+.+|.++.+.|....++- ...+..+.-+++++..-...+... +.+.++|++|.||=
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~-----------~~~~~~DvvLLgPQ 62 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHY-----------DIMGVYDLIILAPQ 62 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCT-----------TTGGGCSEEEECGG
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEEcchHHHH-----------hhccCCCEEEEChH
Confidence 34679999999998887653 333444445777666554444311 12356899999884
No 77
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=44.83 E-value=79 Score=28.86 Aligned_cols=73 Identities=12% Similarity=-0.036 Sum_probs=42.2
Q ss_pred HHHHHHHHh--CCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH-----H---HHHHHHHhC-CCCccEE
Q psy9726 223 KFAFDYATK--NNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV-----D---NCTMQIVSN-PHQFDVM 291 (381)
Q Consensus 223 r~AFe~A~~--r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v-----D---~~~~~lv~~-P~~fdVi 291 (381)
+.|.++..+ +|.++|-++.-..-.. +.....+-|.+..+++|++++..... + .++.+++.. ...+|.|
T Consensus 123 ~~a~~~L~~~~~G~~~I~~i~g~~~~~-~~~~R~~Gf~~al~~~pgi~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~aI 201 (332)
T 2rjo_A 123 EETATQLFKSMGGKGGVVALGGIFSNV-PAIERKAGLDAALKKFPGIQLLDFQVADWNSQKAFPIMQAWMTRFNSKIKGV 201 (332)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECCTTCH-HHHHHHHHHHHHHHTCTTEEEEEEEECTTCHHHHHHHHHHHHHHHGGGEEEE
T ss_pred HHHHHHHHHHcCCCCeEEEEECCCCCc-cHHHHHHHHHHHHHhCCCcEEEeeccCCCCHHHHHHHHHHHHHhcCCCeeEE
Confidence 344444444 5677887775331111 12344455666667889887654321 1 244566665 5678999
Q ss_pred EcCCc
Q psy9726 292 VMPNL 296 (381)
Q Consensus 292 vt~Nl 296 (381)
+|.|=
T Consensus 202 ~~~nd 206 (332)
T 2rjo_A 202 WAAND 206 (332)
T ss_dssp EESSH
T ss_pred EECCC
Confidence 99873
No 78
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=43.93 E-value=13 Score=36.19 Aligned_cols=22 Identities=32% Similarity=0.602 Sum_probs=17.6
Q ss_pred CceEEEEecCC--CchhHHHHHHH
Q psy9726 71 GRTKCTLIPGD--GVGPELVYSVQ 92 (381)
Q Consensus 71 ~~~~IavipGD--GIGpEV~~aa~ 92 (381)
++.+|++-.|| ||||||+-.++
T Consensus 7 ~~~kIaIT~GDPaGIGpEIilKa~ 30 (349)
T 4aty_A 7 RAMTVALAIGDPNGIGPEIAVKAA 30 (349)
T ss_dssp CCCCEEEECCCTTSSHHHHHHHHH
T ss_pred CCCeEEEECCCcchhHHHHHHHHH
Confidence 35689999997 89999986553
No 79
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=41.79 E-value=91 Score=27.56 Aligned_cols=80 Identities=13% Similarity=0.097 Sum_probs=44.1
Q ss_pred cHHHHHHHHHHHHHHHH-h-CCCCc--EEEEE-cCCccccccHHHHHHHHHHHhhCCCeEEeEEe-----HH---HHHHH
Q psy9726 214 TAEKSRRIAKFAFDYAT-K-NNRKK--VTAVH-KANIMKLGDGLFLNSCKEMAKLYPKIQFEQMI-----VD---NCTMQ 280 (381)
Q Consensus 214 Tr~~~eRiar~AFe~A~-~-r~~k~--Vt~v~-KaNv~~~tdglf~~~~~eva~eypdI~~~~~~-----vD---~~~~~ 280 (381)
...+.+..+++..+... . +|.++ |.++. ..+.. +.....+-|.+..+++|++++...+ .+ .++.+
T Consensus 107 ~~~~~~~~~~~L~~~~g~~~~G~r~i~i~~l~g~~~~~--~~~~R~~gf~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 184 (290)
T 2fn9_A 107 NYYGGVLAGEYFVKFLKEKYPDAKEIPYAELLGILSAQ--PTWDRSNGFHSVVDQYPEFKMVAQQSAEFDRDTAYKVTEQ 184 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSCSCEEEEEEECCTTCH--HHHHHHHHHHHHHTTSTTEEEEEEEECTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCcccceeEEEEEcCCCCc--hHHHHHHHHHHHHHhCCCCEEEEeccCCCCHHHHHHHHHH
Confidence 34555666666655422 1 14566 55554 22221 1234445666666778888764332 12 24556
Q ss_pred HHhCCCCccEEEcCC
Q psy9726 281 IVSNPHQFDVMVMPN 295 (381)
Q Consensus 281 lv~~P~~fdVivt~N 295 (381)
+++....+|.|+|.|
T Consensus 185 ll~~~~~~~ai~~~~ 199 (290)
T 2fn9_A 185 ILQAHPEIKAIWCGN 199 (290)
T ss_dssp HHHHCTTCCEEEESS
T ss_pred HHHhCCCCcEEEECC
Confidence 666555699999987
No 80
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=38.57 E-value=1.4e+02 Score=23.54 Aligned_cols=60 Identities=13% Similarity=0.209 Sum_probs=40.6
Q ss_pred CCCCceEEEEecCCCchhHH--HHHHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHHHhcCcEEEecc
Q psy9726 68 VPEGRTKCTLIPGDGVGPEL--VYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGVL 138 (381)
Q Consensus 68 a~~~~~~IavipGDGIGpEV--~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i~~~daiL~G~v 138 (381)
.....++|.++.|-|+|--. .....+.++..+++++.....+..... .+.++|++|.++-
T Consensus 17 ~~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~-----------~~~~~DlIist~~ 78 (113)
T 1tvm_A 17 FQGSKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIET-----------YMDGVHLICTTAR 78 (113)
T ss_dssp CSCSSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTT-----------STTSCSEEEESSC
T ss_pred hcccccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhh-----------ccCCCCEEEECCc
Confidence 33456799999999999866 466667888778776666555544211 1235888887663
No 81
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=38.39 E-value=71 Score=28.30 Aligned_cols=82 Identities=7% Similarity=0.077 Sum_probs=47.5
Q ss_pred cHHHHHHHHHHHHHH--HHh-CCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH--------HHHHHHHH
Q psy9726 214 TAEKSRRIAKFAFDY--ATK-NNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV--------DNCTMQIV 282 (381)
Q Consensus 214 Tr~~~eRiar~AFe~--A~~-r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v--------D~~~~~lv 282 (381)
...+.+..+++..+. -.+ +.+++|-++.-..-.. +.....+-+.+..+++|++++..... -.++.+++
T Consensus 112 ~~~~g~~~~~~l~~~~~g~~~~~~~~i~~i~g~~~~~-~~~~R~~gf~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~l 190 (293)
T 3l6u_A 112 NQMIGEQLASYIKNELIKQTGRSTGRIVEITGTANVY-TTNERHRGFLKGIENEPTLSIVDSVSGNYDPVTSERVMRQVI 190 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCSCEEEEEEECSTTCH-HHHHHHHHHHHHHTTCTTEEEEEEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCceEEEEECCCCCc-hHHHHHHHHHHHHHhCCCcEEeeeccCCCCHHHHHHHHHHHH
Confidence 355556666666653 222 1113777775221111 22344556777778889988765332 13456677
Q ss_pred hCCCCccEEEcCCc
Q psy9726 283 SNPHQFDVMVMPNL 296 (381)
Q Consensus 283 ~~P~~fdVivt~Nl 296 (381)
.....+|.|+|.|=
T Consensus 191 ~~~~~~~ai~~~~d 204 (293)
T 3l6u_A 191 DSGIPFDAVYCHND 204 (293)
T ss_dssp HTTCCCSEEEESSH
T ss_pred HhCCCCCEEEECCc
Confidence 77678999999874
No 82
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=37.68 E-value=98 Score=26.91 Aligned_cols=73 Identities=7% Similarity=0.013 Sum_probs=41.9
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH-----H---HHHHHHHhCCC-CccEE
Q psy9726 221 IAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV-----D---NCTMQIVSNPH-QFDVM 291 (381)
Q Consensus 221 iar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v-----D---~~~~~lv~~P~-~fdVi 291 (381)
..+.|.++-.++|.+++-++.-..-.. +.....+-|.+..++++ ++...... + .++.++++... .+|.|
T Consensus 107 ~~~~a~~~L~~~G~~~i~~i~~~~~~~-~~~~R~~gf~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai 184 (272)
T 3o74_A 107 ASRQLAASLLSSAPRSIALIGARPELS-VSQARAGGFDEALQGYT-GEVRRYQGEAFSRECGQRLMQQLIDDLGGLPDAL 184 (272)
T ss_dssp HHHHHHHHHHTTCCSEEEEEEECTTSH-HHHHHHHHHHHHTTTCC-SEEEEEEESSSSHHHHHHHHHHHHHHHTSCCSEE
T ss_pred HHHHHHHHHHHCCCcEEEEEecCCCCc-cHHHHHHHHHHHHHHcC-CChheeecCCCCHHHHHHHHHHHHhcCCCCCcEE
Confidence 345566777777888888775432222 22344455666666664 44433221 1 34455665544 89999
Q ss_pred EcCC
Q psy9726 292 VMPN 295 (381)
Q Consensus 292 vt~N 295 (381)
+|.|
T Consensus 185 ~~~~ 188 (272)
T 3o74_A 185 VTTS 188 (272)
T ss_dssp EESS
T ss_pred EEeC
Confidence 9987
No 83
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=36.67 E-value=1.1e+02 Score=27.17 Aligned_cols=75 Identities=11% Similarity=0.140 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhC----CCeEEeEE----------eHHHHHHHHHhCCC
Q psy9726 221 IAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLY----PKIQFEQM----------IVDNCTMQIVSNPH 286 (381)
Q Consensus 221 iar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~ey----pdI~~~~~----------~vD~~~~~lv~~P~ 286 (381)
..+.|.++-.++|.++|-++.-..-.. +.....+-+.+..+++ ....+..- ++..++.++++...
T Consensus 118 ~g~~a~~~L~~~G~~~I~~i~~~~~~~-~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 196 (301)
T 3miz_A 118 GARDLTRYLLERGHRRIGYIRLNPILL-GAELRLDAFRRTTSEFGLTENDLSISLGMDGPVGAENNYVFAAATEMLKQDD 196 (301)
T ss_dssp HHHHHHHHHHTTTCCSEEEEECCTTSH-HHHHHHHHHHHHHHHHTCCGGGEEEEECEESSTTSCEECHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHcCCCeEEEEecCccch-hHHHHHHHHHHHHHHcCCCCCcceEEEcCCCCcCccccHHHHHHHHHHcCCC
Confidence 345566666667888888876432221 1223333444433332 11111111 11166777888777
Q ss_pred CccEEEcCCc
Q psy9726 287 QFDVMVMPNL 296 (381)
Q Consensus 287 ~fdVivt~Nl 296 (381)
.+|.|+|.|=
T Consensus 197 ~~~ai~~~~d 206 (301)
T 3miz_A 197 RPTAIMSGND 206 (301)
T ss_dssp CCSEEEESSH
T ss_pred CCcEEEECCH
Confidence 8999999873
No 84
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=35.56 E-value=1.3e+02 Score=26.44 Aligned_cols=69 Identities=14% Similarity=0.121 Sum_probs=47.7
Q ss_pred cccCCCCceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHHH-----hcCcEEEeccc
Q psy9726 65 HQSVPEGRTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIA-----RNGICLKGVLS 139 (381)
Q Consensus 65 vfsa~~~~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i~-----~~daiL~G~v~ 139 (381)
.+++|.-+.+|++|-|---=-++++++.++|+.+++++|.. -... |-.|++..+-++ .+++++-++=+
T Consensus 5 ~~~~~~m~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~-----V~Sa--HR~p~~~~~~~~~a~~~g~~ViIa~AG~ 77 (174)
T 3kuu_A 5 LNSAYAAGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVE-----VVSA--HRTPDRLFSFAEQAEANGLHVIIAGNGG 77 (174)
T ss_dssp -CCSSCCCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEE-----ECCT--TTCHHHHHHHHHHTTTTTCSEEEEEEES
T ss_pred ccccccCCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEE-----EEcc--cCCHHHHHHHHHHHHhCCCcEEEEECCh
Confidence 45677778899999998877899999999999998774432 2211 223555544443 36888887755
Q ss_pred C
Q psy9726 140 T 140 (381)
Q Consensus 140 ~ 140 (381)
.
T Consensus 78 a 78 (174)
T 3kuu_A 78 A 78 (174)
T ss_dssp S
T ss_pred h
Confidence 4
No 85
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=34.11 E-value=23 Score=34.33 Aligned_cols=21 Identities=33% Similarity=0.846 Sum_probs=16.0
Q ss_pred CceEEEEecCC--CchhHHHHHH
Q psy9726 71 GRTKCTLIPGD--GVGPELVYSV 91 (381)
Q Consensus 71 ~~~~IavipGD--GIGpEV~~aa 91 (381)
.+.+|++-.|| ||||||+-.+
T Consensus 7 ~~~~iaiT~GDpaGIGpEiilka 29 (334)
T 3lxy_A 7 HNNRLVITPGEPAGVGPDLAITL 29 (334)
T ss_dssp CCSEEEEECCCTTSSHHHHHHHH
T ss_pred CCCEEEEeCCCCccchHHHHHHh
Confidence 35688888888 6999987544
No 86
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=34.07 E-value=97 Score=31.54 Aligned_cols=65 Identities=14% Similarity=0.244 Sum_probs=41.4
Q ss_pred HHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHHHHHHHHHhCCCCccEEEcCCcch
Q psy9726 225 AFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYG 298 (381)
Q Consensus 225 AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~G 298 (381)
+..+|+. | -.||-+| + + .--.++++.-+++.+.+.+++...|.-...--..+++||||+|..++=
T Consensus 81 ~~~la~~-g-a~V~giD----~--~-~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~e 145 (569)
T 4azs_A 81 SLSLASK-G-ATIVGID----F--Q-QENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFH 145 (569)
T ss_dssp HHHHHHT-T-CEEEEEE----S--C-HHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHH
T ss_pred HHHHHhC-C-CEEEEEC----C--C-HHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchh
Confidence 4445654 4 4799998 2 2 344567777777777666666665543221123678999999988774
No 87
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=33.62 E-value=1.3e+02 Score=22.62 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=44.7
Q ss_pred eeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeE
Q psy9726 208 ECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQ 268 (381)
Q Consensus 208 ~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~ 268 (381)
.|+.=.|.+++.+.....++-|..++.+.|.++|= + ..|.-++.+.+.-+++|.|.
T Consensus 7 lDLhG~~~~eA~~~l~~fl~~a~~~g~~~v~IIHG----k-G~GvLr~~V~~~L~~~~~V~ 62 (83)
T 2zqe_A 7 VDLRGLTVAEALLEVDQALEEARALGLSTLRLLHG----K-GTGALRQAIREALRRDKRVE 62 (83)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECC----S-TTSHHHHHHHHHHHHCTTEE
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC----C-CchHHHHHHHHHHhcCCcee
Confidence 46666788999999999999999888889999982 2 23677877888777788765
No 88
>3k01_A Acarbose/maltose binding protein GACH; ABC transporter, acarbose-binding protein, transport protein; 1.35A {Streptomyces glaucescens} PDB: 3jzj_A* 3k00_A* 3k02_A*
Probab=33.46 E-value=63 Score=30.54 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=41.9
Q ss_pred CCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH--HHHHHHH---HhCCC-CccEEEcCC
Q psy9726 234 RKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV--DNCTMQI---VSNPH-QFDVMVMPN 295 (381)
Q Consensus 234 ~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v--D~~~~~l---v~~P~-~fdVivt~N 295 (381)
..+||+-+-.+ ......|.+++++..++||+|+++...+ |....+| +.... .+||+...+
T Consensus 27 ~~~l~~w~~~~--~~~~~~~~~~~~~f~~~~pgi~V~~~~~~~~~~~~kl~~~~~sg~~~pDv~~~~~ 92 (412)
T 3k01_A 27 SGTVTFWDTSN--EAEKATYQALAEGFEKEHPKVDVKYVNVPFGEANAKFKNAAGGNSGAPDVMRTEV 92 (412)
T ss_dssp CEEEEEEECCC--TTTHHHHHHHHHTHHHHCTTEEEEEEECCHHHHHHHHHHHHHTTSSCCSEEEEEH
T ss_pred CcEEEEecCCC--CcchHHHHHHHHHHHHHCcCeEEEEEecChHHHHHHHHHHHhcCCCCCCEEEecC
Confidence 45788887665 2234688889998889999999998876 3343343 33555 699988743
No 89
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=33.32 E-value=1.3e+02 Score=27.24 Aligned_cols=64 Identities=6% Similarity=-0.017 Sum_probs=36.0
Q ss_pred CCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEe-H----H---HHHHHHHhCCCCccEEEcCCcc
Q psy9726 233 NRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMI-V----D---NCTMQIVSNPHQFDVMVMPNLY 297 (381)
Q Consensus 233 ~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~-v----D---~~~~~lv~~P~~fdVivt~Nl~ 297 (381)
|.++|-++.-..-.. +.....+-+.+..+++|++++.... - + .++.+++.....+|.|+|.|-.
T Consensus 127 G~~~I~~i~~~~~~~-~~~~R~~Gf~~al~~~pg~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~aI~~~nd~ 198 (325)
T 2x7x_A 127 GKGNIVELTGLSGST-PAMERHQGFMAAISKFPDIKLIDKADAAWERGPAEIEMDSMLRRHPKIDAVYAHNDR 198 (325)
T ss_dssp TEEEEEEEESCTTSH-HHHHHHHHHHHHHHTCTEEEEEEEEECTTSHHHHHHHHHHHHHHCSCCCEEEESSTT
T ss_pred CCceEEEEECCCCCc-cHHHHHHHHHHHHHhCCCCEEEeeecCCCCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 667787775321111 1223345566666778888765422 1 1 2345666544568999988753
No 90
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp}
Probab=32.95 E-value=1.5e+02 Score=28.32 Aligned_cols=98 Identities=19% Similarity=0.110 Sum_probs=61.6
Q ss_pred cHHHHHHHHHHHHHHHHhCCC-CcEEEEEcCCcc-cccc--HHHHHHHHHHHhhCC----CeEEeE-EeHHHHHHHHH--
Q psy9726 214 TAEKSRRIAKFAFDYATKNNR-KKVTAVHKANIM-KLGD--GLFLNSCKEMAKLYP----KIQFEQ-MIVDNCTMQIV-- 282 (381)
Q Consensus 214 Tr~~~eRiar~AFe~A~~r~~-k~Vt~v~KaNv~-~~td--glf~~~~~eva~eyp----dI~~~~-~~vD~~~~~lv-- 282 (381)
|.+....|+..|-++|+.-|- -||-+..=+|.- .... ..-++.++-+.+.+| ++.++= +..|++.-.=+
T Consensus 177 ~~e~l~~ia~~a~~~a~~~Gi~PkVAlLs~s~~Gs~~~~~~~~~~~A~~llk~~~~~~~~~~~vdGpl~~D~A~~~~~~~ 256 (331)
T 4e4r_A 177 DSQGLAEIAVESAKSALSFGMDPKVAMLSFSTKGSAKSDDVTKVQEAVKLAQQKAEEEKLEAIIDGEFQFDAAIVPGVAE 256 (331)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCCEEEEECSSSTTSSCSHHHHHHHHHHHHHHHHHHHTTCSCEEEEEECHHHHHCHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCcHHHHHHHHHHHhhCcCCCCCeEEEccCcHHHHcCHHHHH
Confidence 677788899999999987653 356665422211 1111 123343333334456 777754 55888763332
Q ss_pred ----hCC--CCccEEEcCCcc-hhHHHHhhhhhcCC
Q psy9726 283 ----SNP--HQFDVMVMPNLY-GNIVDNLASGLVGG 311 (381)
Q Consensus 283 ----~~P--~~fdVivt~Nl~-GDILSDlaa~l~Gs 311 (381)
.+| +++||+|++|+. |+|+--+..-+.|+
T Consensus 257 ~k~~~s~vaG~advli~P~l~aGNi~~K~l~~~~~a 292 (331)
T 4e4r_A 257 KKAPGAKLQGDANVFVFPSLEAGNIGYKIAQRLGGY 292 (331)
T ss_dssp HHSTTCSCSSCCCEEECSSHHHHHHHHHHHHHTTCC
T ss_pred hhCCCCccCCcCCEEEeCChhHHHHHHHHHHHhcCC
Confidence 333 689999999998 99999888766655
No 91
>3quf_A Extracellular solute-binding protein, family 1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Bifidobacterium longum subsp}
Probab=32.22 E-value=1.2e+02 Score=28.55 Aligned_cols=58 Identities=10% Similarity=0.081 Sum_probs=40.0
Q ss_pred CCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH---HHHHHHH---HhCCCCccEEEcCCc
Q psy9726 234 RKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV---DNCTMQI---VSNPHQFDVMVMPNL 296 (381)
Q Consensus 234 ~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v---D~~~~~l---v~~P~~fdVivt~Nl 296 (381)
+..||+.+=. .+..+.+++++..++||+|+++...+ |....+| +..-..+||+...+-
T Consensus 29 ~~~l~~~~~~-----~~~~~~~~~~~f~~~~p~i~V~~~~~~~~~~~~~kl~~~~~sg~~pDv~~~~~~ 92 (414)
T 3quf_A 29 KTKISFYSYF-----KDNQIGEVVKGFEKKNPDITLDVQYGQDPAQYISTLQTRLAGGKPPTIFNLTMD 92 (414)
T ss_dssp CEEEEEEESS-----CHHHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHHSSSCCSEEEECTT
T ss_pred CEEEEEEecC-----CchHHHHHHHHHHHHCcCeEEEEEeCCChHHHHHHHHHHHhCCCCCCEEEECCc
Confidence 4456665522 23578888988889999999998875 5544444 344568999987653
No 92
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=31.58 E-value=1.9e+02 Score=23.43 Aligned_cols=60 Identities=20% Similarity=0.235 Sum_probs=33.4
Q ss_pred CCCCcEEEEEcCCccccccHHHHHHHHHHHhhC---CCeEEeEEeHHHHHHHHHhCCCCccEEEcCCcch
Q psy9726 232 NNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLY---PKIQFEQMIVDNCTMQIVSNPHQFDVMVMPNLYG 298 (381)
Q Consensus 232 r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~ey---pdI~~~~~~vD~~~~~lv~~P~~fdVivt~Nl~G 298 (381)
++..+|+.+|.. .-..+.+++-.+++ +.+++...-+......+-..++.||+|++...|.
T Consensus 65 ~~~~~v~~vD~~-------~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~ 127 (187)
T 2fhp_A 65 RGMDKSICIEKN-------FAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA 127 (187)
T ss_dssp TTCSEEEEEESC-------HHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG
T ss_pred cCCCEEEEEECC-------HHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 345689999843 22333444433322 2455554444333333444578999999887765
No 93
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=31.19 E-value=2.1e+02 Score=25.92 Aligned_cols=82 Identities=9% Similarity=0.083 Sum_probs=52.4
Q ss_pred ceEEEEecCC----CchhHHHHHHHHHHHHcCCCcceEEEecccccCCCC---CC--hHHHHHHHHhcCcEEEecccCCC
Q psy9726 72 RTKCTLIPGD----GVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMS---AP--LETVADSIARNGICLKGVLSTPD 142 (381)
Q Consensus 72 ~~~IavipGD----GIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~---~~--~~etl~~i~~~daiL~G~v~~p~ 142 (381)
..+|.+|-|- |....+++++.+.++..+. +++.+++........ .. ..+..+.++++|+++++ +|.
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~--eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~~---sP~ 108 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGA--EVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSEGQVWV---SPE 108 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTC--EEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCSEEEEE---EEC
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCC--EEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCCEEEEE---eCC
Confidence 4577787775 6777888888888877664 455555554321111 11 36678899999999985 466
Q ss_pred CCCCcccchhhHHHHHhhcce
Q psy9726 143 YSHTGELQTLNMKLRKALDLY 163 (381)
Q Consensus 143 ~~~~~~~~s~~~~LR~~ldly 163 (381)
| +.+.-..|..-+|..
T Consensus 109 Y-----n~sipa~LKn~iD~l 124 (247)
T 2q62_A 109 R-----HGAMTGIMKAQIDWI 124 (247)
T ss_dssp S-----SSSCCHHHHHHHHTS
T ss_pred C-----CCCccHHHHHHHHHh
Confidence 4 223445677777743
No 94
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=30.75 E-value=2.5e+02 Score=25.35 Aligned_cols=64 Identities=11% Similarity=0.196 Sum_probs=35.4
Q ss_pred CCCCcEEEEEcCCccccccHHHHHHHHHHH-hhCCCeEEeEEe-----HH---HHHHHHHhCCCCccEEEcCCc
Q psy9726 232 NNRKKVTAVHKANIMKLGDGLFLNSCKEMA-KLYPKIQFEQMI-----VD---NCTMQIVSNPHQFDVMVMPNL 296 (381)
Q Consensus 232 r~~k~Vt~v~KaNv~~~tdglf~~~~~eva-~eypdI~~~~~~-----vD---~~~~~lv~~P~~fdVivt~Nl 296 (381)
++.+++-++.=..-.. ....|.+-+.+.. +.+|++++.... .+ ..+.+|++....+|.|+|.|=
T Consensus 126 ~g~~~i~~i~g~~~~~-~~~~r~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~aI~~~nD 198 (316)
T 1tjy_A 126 KEKAKVAFFYSSPTVT-DQNQWVKEAKAKISQEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDA 198 (316)
T ss_dssp SSSEEEEEEESCSSCH-HHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHHHHHHHHHHHCSSCCEEEECST
T ss_pred CCCCEEEEEEcCCCCh-hHHHHHHHHHHHHHhhCCCcEEEEeccCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 3566777775221111 2245666666654 468888754432 12 223445554347999999883
No 95
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=30.43 E-value=55 Score=26.79 Aligned_cols=27 Identities=26% Similarity=0.421 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEc
Q psy9726 215 AEKSRRIAKFAFDYATKNNRKKVTAVHK 242 (381)
Q Consensus 215 r~~~eRiar~AFe~A~~r~~k~Vt~v~K 242 (381)
...+++.+++|.++|+..+ .+|+++|=
T Consensus 35 s~~s~~al~~A~~la~~~~-a~l~llhV 61 (155)
T 3dlo_A 35 SDRAERVLRFAAEEARLRG-VPVYVVHS 61 (155)
T ss_dssp SHHHHHHHHHHHHHHHHHT-CCEEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcC-CEEEEEEE
Confidence 3568899999999998864 46887763
No 96
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=30.36 E-value=30 Score=33.47 Aligned_cols=17 Identities=35% Similarity=0.866 Sum_probs=10.4
Q ss_pred EEEecCC--CchhHHHHHH
Q psy9726 75 CTLIPGD--GVGPELVYSV 91 (381)
Q Consensus 75 IavipGD--GIGpEV~~aa 91 (381)
|++-.|| ||||||+-.+
T Consensus 9 iaIT~GDpaGIGpEii~ka 27 (330)
T 2hi1_A 9 VAITMGDPAGIGPEIIVKA 27 (330)
T ss_dssp EEEECCCTTTTHHHHHHHH
T ss_pred EEEcCCCCcchhHHHHHHH
Confidence 6666666 5666665543
No 97
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=29.80 E-value=2.1e+02 Score=24.72 Aligned_cols=73 Identities=7% Similarity=-0.081 Sum_probs=36.7
Q ss_pred HHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCC-CeEEe-----EEeHH---HHHHHHHhCCCCccEEE
Q psy9726 222 AKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYP-KIQFE-----QMIVD---NCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 222 ar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eyp-dI~~~-----~~~vD---~~~~~lv~~P~~fdViv 292 (381)
.+.|.++..++|.++|-++.-..-... .....+-|.+..+++. .+... ....+ .++.++++....+|.|+
T Consensus 108 ~~~a~~~L~~~G~~~i~~i~~~~~~~~-~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~ 186 (275)
T 3d8u_A 108 GKACTRHLIEQGFKNVGFIGARGNHST-LQRQLHGWQSAMIENYLTPDHFLTTHEAPSSQLGAEGLAKLLLRDSSLNALV 186 (275)
T ss_dssp HHHHHHHHHTTTCCCEEEEECSCSSHH-HHHHHHHHHHHHHHTTCCCCCEEECSSCCCHHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHHHCCCCeEEEEcCCCCCch-HHHHHHHHHHHHHHcCCCCCccEEEeCCCChhHHHHHHHHHHhCCCCCCEEE
Confidence 444555555667778877753211111 1223334444444432 11111 11122 24566777767899999
Q ss_pred cCC
Q psy9726 293 MPN 295 (381)
Q Consensus 293 t~N 295 (381)
|.|
T Consensus 187 ~~~ 189 (275)
T 3d8u_A 187 CSH 189 (275)
T ss_dssp ESS
T ss_pred EcC
Confidence 987
No 98
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=28.80 E-value=1.3e+02 Score=26.61 Aligned_cols=60 Identities=13% Similarity=0.097 Sum_probs=33.3
Q ss_pred CCcEEEEE-cCCccccccHHHHHHHHHHHhhCCCeEEeEEe-----HH---HHHHHHHhCCCCccEEEcCC
Q psy9726 234 RKKVTAVH-KANIMKLGDGLFLNSCKEMAKLYPKIQFEQMI-----VD---NCTMQIVSNPHQFDVMVMPN 295 (381)
Q Consensus 234 ~k~Vt~v~-KaNv~~~tdglf~~~~~eva~eypdI~~~~~~-----vD---~~~~~lv~~P~~fdVivt~N 295 (381)
.++|-++. ..+.. +...-.+-+++..+++|++++.... .+ .++.+|+..+..+|.|+|.|
T Consensus 133 ~~~I~~i~g~~~~~--~~~~R~~Gf~~al~~~~g~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ai~~~n 201 (288)
T 1gud_A 133 GGEVAIIEGKAGNA--SGEARRNGATEAFKKASQIKLVASQPADWDRIKALDVATNVLQRNPNIKAIYCAN 201 (288)
T ss_dssp CEEEEEEECSTTCH--HHHHHHHHHHHHHHTCTTEEEEEEEECTTCHHHHHHHHHHHHHHCTTCCEEEESS
T ss_pred CCEEEEEeCCCCCc--hHhHHHHHHHHHHHhCCCcEEEEeecCCccHHHHHHHHHHHHHhCCCceEEEECC
Confidence 56776665 22221 1122234455655678887654322 12 23456666555799999987
No 99
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=27.96 E-value=52 Score=32.09 Aligned_cols=52 Identities=21% Similarity=0.309 Sum_probs=31.9
Q ss_pred HhCCCCcEEEEEcCCccccccHHHHHHHHHHHh--hCCC-eEEeEEeHHHHHHHHHhCCCCccEEEcC
Q psy9726 230 TKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAK--LYPK-IQFEQMIVDNCTMQIVSNPHQFDVMVMP 294 (381)
Q Consensus 230 ~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~--eypd-I~~~~~~vD~~~~~lv~~P~~fdVivt~ 294 (381)
.+.|.++|+.|+++++. +.++++.+ .+.+ |++-+--+.. +.-|++|||||++
T Consensus 102 a~aGA~~V~ave~s~~~--------~~a~~~~~~n~~~~~i~~i~~~~~~-----~~lpe~~DvivsE 156 (376)
T 4hc4_A 102 AQAGARRVYAVEASAIW--------QQAREVVRFNGLEDRVHVLPGPVET-----VELPEQVDAIVSE 156 (376)
T ss_dssp HHTTCSEEEEEECSTTH--------HHHHHHHHHTTCTTTEEEEESCTTT-----CCCSSCEEEEECC
T ss_pred HHhCCCEEEEEeChHHH--------HHHHHHHHHcCCCceEEEEeeeeee-----ecCCccccEEEee
Confidence 34577899999976532 23444432 3433 6655544432 2468999999985
No 100
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=27.88 E-value=34 Score=33.59 Aligned_cols=19 Identities=26% Similarity=0.454 Sum_probs=13.6
Q ss_pred eEEEEecCC--CchhHHHHHH
Q psy9726 73 TKCTLIPGD--GVGPELVYSV 91 (381)
Q Consensus 73 ~~IavipGD--GIGpEV~~aa 91 (381)
.+|++-.|| ||||||+-.+
T Consensus 5 ~~iaIT~GDpaGIGpEI~~ka 25 (367)
T 3tsn_A 5 KKLAISIGDINSIGLEILVRS 25 (367)
T ss_dssp CEEEEECCCTTTTHHHHHHHH
T ss_pred CEEEEeCCCCccchHHHHHHh
Confidence 467777777 7888886544
No 101
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=27.87 E-value=29 Score=33.60 Aligned_cols=18 Identities=39% Similarity=0.982 Sum_probs=14.8
Q ss_pred EEEEecCC--CchhHHHHHH
Q psy9726 74 KCTLIPGD--GVGPELVYSV 91 (381)
Q Consensus 74 ~IavipGD--GIGpEV~~aa 91 (381)
+|++-.|| ||||||+-.+
T Consensus 4 ~iaIT~GDpaGIGpEii~ka 23 (328)
T 1yxo_A 4 RFALTPGEPAGIGPDLCLLL 23 (328)
T ss_dssp CEEEECCSTTSSHHHHHHHH
T ss_pred EEEEcCCCCcchhHHHHHHH
Confidence 58888888 8999988755
No 102
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=27.71 E-value=1.9e+02 Score=25.49 Aligned_cols=70 Identities=14% Similarity=0.175 Sum_probs=37.6
Q ss_pred HHHHHHHhC-C-CCcEEEEE-cCCccccccHHHHHHHHHHHhhCCCeEEeEEe-----HH---HHHHHHHhCCCCccEEE
Q psy9726 224 FAFDYATKN-N-RKKVTAVH-KANIMKLGDGLFLNSCKEMAKLYPKIQFEQMI-----VD---NCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 224 ~AFe~A~~r-~-~k~Vt~v~-KaNv~~~tdglf~~~~~eva~eypdI~~~~~~-----vD---~~~~~lv~~P~~fdViv 292 (381)
.|-++-.++ | .+++-++. ..+.. +.....+-+++..+++|++++.... .+ .++.+|+..+..+|.|+
T Consensus 111 ~a~~~L~~~~gg~~~I~~i~g~~~~~--~~~~R~~Gf~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~ai~ 188 (283)
T 2ioy_A 111 MAAEFIAKALKGKGNVVELEGIPGAS--AARDRGKGFDEAIAKYPDIKIVAKQAADFDRSKGLSVMENILQAQPKIDAVF 188 (283)
T ss_dssp HHHHHHHHHTTTCEEEEEEECCTTCH--HHHHHHHHHHHHHTTCTTEEEEEEEECTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred HHHHHHHHHcCCCceEEEEECCCCCc--cHHHHHHHHHHHHHhCCCCEEEeeccCCCCHHHHHHHHHHHHHhCCCccEEE
Confidence 344444333 3 56777765 22221 1122334566666788888654321 12 23455665555789999
Q ss_pred cCC
Q psy9726 293 MPN 295 (381)
Q Consensus 293 t~N 295 (381)
|.|
T Consensus 189 ~~n 191 (283)
T 2ioy_A 189 AQN 191 (283)
T ss_dssp ESS
T ss_pred ECC
Confidence 998
No 103
>3i3v_A Probable secreted solute-binding lipoprotein; transporter, PSI-II, structural genomics, protein structure initiative; 2.30A {Streptomyces coelicolor}
Probab=26.71 E-value=1.5e+02 Score=27.60 Aligned_cols=61 Identities=10% Similarity=0.183 Sum_probs=39.1
Q ss_pred CCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH--H--HHHHHHHhCCCCccEEEcC
Q psy9726 234 RKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV--D--NCTMQIVSNPHQFDVMVMP 294 (381)
Q Consensus 234 ~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v--D--~~~~~lv~~P~~fdVivt~ 294 (381)
+..||+.+-..--......|.+++++..++||+|+++...+ | .-....+..-..+||+...
T Consensus 7 ~~tl~~~~~~~~~~~~~~~~~~~~~~f~~~~p~i~V~~~~~~~~~~~kl~~~~~sg~~pDv~~~~ 71 (405)
T 3i3v_A 7 PDTLVVHTQLGTTAPGSPTYLAAVDRFREENPGVKIKNLVNGDDLAQVYETSRLARKEADVVMVN 71 (405)
T ss_dssp CCSEEEEESCSSSSTTHHHHHHHHHHHHHHSTTCCEEEEECSTTHHHHHHHHHHTTCCCSEEEEC
T ss_pred CcEEEEEeecCCCchhhHHHHHHHHHHHHHCCCcEEEEEECcHHHHHHHHHHHHCCCCCcEEEec
Confidence 45688876322211124678888988889999999888776 2 2222334444578998884
No 104
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=26.65 E-value=77 Score=27.95 Aligned_cols=75 Identities=11% Similarity=-0.036 Sum_probs=42.7
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCc-cccccHHHHHHHHHHHhhCCCeEEeEE--eHH---HHHHHHHhCCCCccEEEcC
Q psy9726 221 IAKFAFDYATKNNRKKVTAVHKANI-MKLGDGLFLNSCKEMAKLYPKIQFEQM--IVD---NCTMQIVSNPHQFDVMVMP 294 (381)
Q Consensus 221 iar~AFe~A~~r~~k~Vt~v~KaNv-~~~tdglf~~~~~eva~eypdI~~~~~--~vD---~~~~~lv~~P~~fdVivt~ 294 (381)
..+.|.++-.++|.+++-++.-..- .. +.....+-|++..+++|.+.++.. .-+ ..+.+++.....+|.|+|.
T Consensus 110 ~g~~a~~~L~~~G~~~I~~i~~~~~~~~-~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~ 188 (276)
T 3jy6_A 110 AAKAATTAFRQQGYQHVVVLTSELELSR-TRQERYRGILAAAQDVDVLEVSESSYNHSEVHQRLTQLITQNDQKTVAFAL 188 (276)
T ss_dssp HHHHHHHHHHTTTCCEEEEEEECSTTCH-HHHHHHHHHHTTCSEEEEEEECSSSCCHHHHHHHHHHHHHSSSSCEEEEES
T ss_pred HHHHHHHHHHHcCCCeEEEEecCCCCCc-hHHHHHHHHHHHHHhCCcEEEeccccCCcHHHHHHHHHHhcCCCCcEEEEe
Confidence 3455666666778888877764332 21 223444556666566665333321 111 2234445677789999997
Q ss_pred Cc
Q psy9726 295 NL 296 (381)
Q Consensus 295 Nl 296 (381)
|-
T Consensus 189 ~d 190 (276)
T 3jy6_A 189 KE 190 (276)
T ss_dssp SH
T ss_pred Cc
Confidence 74
No 105
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=26.55 E-value=2.5e+02 Score=25.09 Aligned_cols=62 Identities=10% Similarity=0.027 Sum_probs=34.3
Q ss_pred CCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEe-----HH---HHHHHHHhCCCCccEEEcCCc
Q psy9726 233 NRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMI-----VD---NCTMQIVSNPHQFDVMVMPNL 296 (381)
Q Consensus 233 ~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~-----vD---~~~~~lv~~P~~fdVivt~Nl 296 (381)
|.++|-++.-..-.. +.....+-|++..++ +++++.... .+ ..+.+++.....+|.|+|.|-
T Consensus 122 G~~~I~~i~~~~~~~-~~~~R~~gf~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d 191 (313)
T 2h3h_A 122 GKGKVVIGTGSLTAM-NSLQRIQGFKDAIKD-SEIEIVDILNDEEDGARAVSLAEAALNAHPDLDAFFGVYA 191 (313)
T ss_dssp SCSEEEEEESCSSCH-HHHHHHHHHHHHHTT-SSCEEEEEEECSSCHHHHHHHHHHHHHHCTTCCEEEECST
T ss_pred CCCEEEEEECCCCCc-cHHHHHHHHHHHhcC-CCCEEEEeecCCCCHHHHHHHHHHHHHHCcCceEEEEcCC
Confidence 567787776431111 122344556665555 677654332 11 234566654457899999874
No 106
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=26.36 E-value=1.3e+02 Score=26.34 Aligned_cols=62 Identities=2% Similarity=-0.039 Sum_probs=32.9
Q ss_pred eEEEEecCCCc---hhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHH--HhcCcEEEecccC
Q psy9726 73 TKCTLIPGDGV---GPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSI--ARNGICLKGVLST 140 (381)
Q Consensus 73 ~~IavipGDGI---GpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i--~~~daiL~G~v~~ 140 (381)
++|+++--+-- -.++.....+.++..|..+.+.. .... .....+.++.+ ++.|+++.-|...
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~~----~~~~~~~~~~l~~~~vdgiIi~~~~~ 82 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTS--TNNN----PDNERRGLENLLSQHIDGLIVEPTKS 82 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEE--CTTC----HHHHHHHHHHHHHTCCSEEEECCSST
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEe--CCCC----hHHHHHHHHHHHHCCCCEEEEecccc
Confidence 67777765533 34666666666666665544432 1110 00012344444 4688888877643
No 107
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=25.88 E-value=1.4e+02 Score=23.33 Aligned_cols=55 Identities=15% Similarity=0.236 Sum_probs=35.4
Q ss_pred ceEEEEecCCCchhHHHHHH-HHHHHHcCCCcceEEEecccccCCCCCChHHHHHHHHhcCcEEEec
Q psy9726 72 RTKCTLIPGDGVGPELVYSV-QEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGV 137 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa-~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i~~~daiL~G~ 137 (381)
..+|.+..|.|+|-.++..- .+.++..+.+++.+...++.. ++ .+.++|++|.+|
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~~--------~~---~~~~~D~Ii~t~ 59 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETRL--------SE---VVDRFDVVLLAP 59 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTTH--------HH---HTTTCSEEEECS
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHHHH--------Hh---hcCCCCEEEECC
Confidence 36799999999998855443 244555577766655444331 21 245789888766
No 108
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=25.18 E-value=2.6e+02 Score=24.48 Aligned_cols=75 Identities=8% Similarity=0.074 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCC-C-----eE---EeEEeHHHHHHHHHhCCCCccEE
Q psy9726 221 IAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYP-K-----IQ---FEQMIVDNCTMQIVSNPHQFDVM 291 (381)
Q Consensus 221 iar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eyp-d-----I~---~~~~~vD~~~~~lv~~P~~fdVi 291 (381)
..+.|.++..++|.++|-++.-..-.. +.....+-|.+..+++. . +. .+..-.-.++.++++....+|.|
T Consensus 112 ~g~~a~~~L~~~G~~~i~~i~~~~~~~-~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai 190 (291)
T 3egc_A 112 GARTAVEYLIARGHTRIGAIVGSAGLM-TSRERLKGFRAAMSAAGLPVRQEWIAAGGVRADNGRDGAIKVLTGADRPTAL 190 (291)
T ss_dssp HHHHHHHHHHHTTCCSEEEECSCTTSH-HHHHHHHHHHHHHHHTTCCCCGGGEEC------CCHHHHHHHHTC-CCCSEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCCCCc-CHHHHHHHHHHHHHHcCCCCCHHHeEeCCCChhHHHHHHHHHHhCCCCCcEE
Confidence 345555665666778888875432221 22334445555544431 1 11 11112235667788777789999
Q ss_pred EcCCc
Q psy9726 292 VMPNL 296 (381)
Q Consensus 292 vt~Nl 296 (381)
+|.|-
T Consensus 191 ~~~~d 195 (291)
T 3egc_A 191 LTSSH 195 (291)
T ss_dssp EESSH
T ss_pred EECCc
Confidence 99873
No 109
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=24.14 E-value=1.6e+02 Score=25.59 Aligned_cols=79 Identities=15% Similarity=0.283 Sum_probs=46.8
Q ss_pred eEEEEecCC----CchhHHHHHHHHHHHHcCCCcceEEEeccccc-CCC--C-CCh---HHHHHHHHhcCcEEEecccCC
Q psy9726 73 TKCTLIPGD----GVGPELVYSVQEVFKAANVPVDFEPFFFSEVN-PTM--S-APL---ETVADSIARNGICLKGVLSTP 141 (381)
Q Consensus 73 ~~IavipGD----GIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~-~~~--~-~~~---~etl~~i~~~daiL~G~v~~p 141 (381)
++|++|-|- ..+..+.+.+.+.++ ..++++.+++..-. ++. . +.| .+..+.++++|++++ .+|
T Consensus 3 k~I~vi~GS~R~~S~~~~la~~~~~~~~---~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii---~tP 76 (190)
T 3u7r_A 3 KTVAVMVGSLRKDSLNHKLMKVLQKLAE---GRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLA---ITP 76 (190)
T ss_dssp EEEEEEESCCSTTCHHHHHHHHHHHHHT---TTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEE---ECC
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhcc---CCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEE---ech
Confidence 478888884 366667766655443 34566666665311 111 1 123 445688999999997 467
Q ss_pred CCCCCcccchhhHHHHHhhcc
Q psy9726 142 DYSHTGELQTLNMKLRKALDL 162 (381)
Q Consensus 142 ~~~~~~~~~s~~~~LR~~ldl 162 (381)
.+. .|.-..|...+|.
T Consensus 77 eYn-----~s~pg~LKn~iDw 92 (190)
T 3u7r_A 77 EYN-----RSYPGMIKNAIDW 92 (190)
T ss_dssp CBT-----TBCCHHHHHHHHH
T ss_pred hhc-----ccCCHHHHHHHHH
Confidence 652 2334566777774
No 110
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=24.11 E-value=1.7e+02 Score=25.90 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=35.7
Q ss_pred HHHHHHHHHh-CCCC-cEEEEEcCCccccccHHHHHHHHHHH-hhCCCeEEeEEe------HH---HHHHHHHhCCCCcc
Q psy9726 222 AKFAFDYATK-NNRK-KVTAVHKANIMKLGDGLFLNSCKEMA-KLYPKIQFEQMI------VD---NCTMQIVSNPHQFD 289 (381)
Q Consensus 222 ar~AFe~A~~-r~~k-~Vt~v~KaNv~~~tdglf~~~~~eva-~eypdI~~~~~~------vD---~~~~~lv~~P~~fd 289 (381)
.+.|.++..+ .|.+ ++.++.-..-... .....+-|++.. +.+|++++.... .+ ..+.+++.....+|
T Consensus 113 g~~a~~~l~~~~g~~~~i~~i~g~~~~~~-~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 191 (303)
T 3d02_A 113 AAEYVEHMAKRMGGKGGYVIYVGSLTVPQ-HNLWADLLVKYQKEHYPDMHEVTRRMPVAESVDDSRRTTLDLMKTYPDLK 191 (303)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECSCSSCHH-HHHHHHHHHHHHHHHCTTEEESSSCBSCTTCHHHHHHHHHHHHHHCTTEE
T ss_pred HHHHHHHHHHHhCcCceEEEEecCCCCcc-HHHHHHHHHHHHHhhCCCCEEEEeecCCCCCHHHHHHHHHHHHHhCCCCC
Confidence 3445555544 4544 6766642211111 123334455543 357877653211 12 23445555434699
Q ss_pred EEEcCC
Q psy9726 290 VMVMPN 295 (381)
Q Consensus 290 Vivt~N 295 (381)
.|+|.|
T Consensus 192 ai~~~~ 197 (303)
T 3d02_A 192 AVVSFG 197 (303)
T ss_dssp EEEESS
T ss_pred EEEEeC
Confidence 999988
No 111
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=23.43 E-value=2.5e+02 Score=21.51 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHH-HhCCCCcEEEEEcCC
Q psy9726 216 EKSRRIAKFAFDYA-TKNNRKKVTAVHKAN 244 (381)
Q Consensus 216 ~~~eRiar~AFe~A-~~r~~k~Vt~v~KaN 244 (381)
..+++.+++|.++| +.. ..+|+++|=..
T Consensus 12 ~~s~~al~~a~~la~~~~-~a~l~ll~v~~ 40 (138)
T 3idf_A 12 EACERAAQYILDMFGKDA-DCTLTLIHVKP 40 (138)
T ss_dssp HHHHHHHHHHHHHHTTCT-TEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHhccCC-CCEEEEEEEec
Confidence 45789999999999 665 46788877443
No 112
>3bvr_A NOTI restriction endonuclease; protein-DNA complex; HET: DNA; 2.50A {Nocardia otitidiscaviarum} PDB: 3bvq_A* 3c25_A*
Probab=23.38 E-value=18 Score=34.75 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=24.5
Q ss_pred hCCCCccEEEcCCcc--hhHHHHhhhhhcCC
Q psy9726 283 SNPHQFDVMVMPNLY--GNIVDNLASGLVGG 311 (381)
Q Consensus 283 ~~P~~fdVivt~Nl~--GDILSDlaa~l~Gs 311 (381)
.+++.||||+|+|.+ +.||+|.+.-..|-
T Consensus 71 ~d~ePydvIiCPiRL~dy~il~~~s~~~Fg~ 101 (383)
T 3bvr_A 71 VDNERYDWLVCPNRALDPLFMSAASRKLFGY 101 (383)
T ss_dssp ETTEEEEEECCGGGGCCHHHHHHHHHHHHTC
T ss_pred CCCCCceEEEcccccccHHHHHHHHHHhcCC
Confidence 477889999999987 56899999888873
No 113
>3c9h_A ABC transporter, substrate binding protein; structural genom MCSG, PSI-2, protein structure initiative; HET: CIT; 1.90A {Agrobacterium tumefaciens str}
Probab=23.32 E-value=1e+02 Score=28.47 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=37.3
Q ss_pred CcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeH--HHHHHHHHhC----CCCccEEEcCC
Q psy9726 235 KKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIV--DNCTMQIVSN----PHQFDVMVMPN 295 (381)
Q Consensus 235 k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~v--D~~~~~lv~~----P~~fdVivt~N 295 (381)
.+||+.+=. ....+.+++++..++||+|+++.... +....+|... -..+||+...+
T Consensus 34 ~~L~v~~~~-----~~~~~~~~~~~Fe~~~Pgi~V~~~~~~~~~~~~kl~~~~~ag~~~~DV~~~~~ 95 (355)
T 3c9h_A 34 QTLVVYSSL-----DEPLATPMIEGFQKANPDIAVHYEDMLTGEIYDRIVKETDAGKKTADFAFSSA 95 (355)
T ss_dssp CEEEEEECS-----CHHHHHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHHHHTTCCBCSEEEESC
T ss_pred CEEEEEeCC-----CHHHHHHHHHHHHHHCcCeEEEEEeCChHHHHHHHHHHHhcCCCCCCEEEecc
Confidence 467776421 22467788888888999998888776 3345566432 24689988776
No 114
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=23.25 E-value=3.3e+02 Score=23.72 Aligned_cols=67 Identities=1% Similarity=0.011 Sum_probs=36.2
Q ss_pred CCceEEEEecCC----CchhHHHHHHHHHHHHc-CCCcceEEEecccccCCCCCChHHHHHHH--HhcCcEEEeccc
Q psy9726 70 EGRTKCTLIPGD----GVGPELVYSVQEVFKAA-NVPVDFEPFFFSEVNPTMSAPLETVADSI--ARNGICLKGVLS 139 (381)
Q Consensus 70 ~~~~~IavipGD----GIGpEV~~aa~~VL~a~-~~~i~~~~~~~g~~~~~~~~~~~etl~~i--~~~daiL~G~v~ 139 (381)
+++++|+++--+ .--.++...+.+.++.. +..+.+.......... ....+.++.+ ++.|+++..|..
T Consensus 6 ~~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~---~~~~~~i~~l~~~~vdgiii~~~~ 79 (304)
T 3gbv_A 6 NKKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDY---NSFVATSQAVIEEQPDGVMFAPTV 79 (304)
T ss_dssp -CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCH---HHHHHHHHHHHTTCCSEEEECCSS
T ss_pred CCcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCH---HHHHHHHHHHHhcCCCEEEECCCC
Confidence 346778766433 34567777777777776 6666655433221100 0012345554 457888887654
No 115
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=22.87 E-value=1.5e+02 Score=26.51 Aligned_cols=60 Identities=7% Similarity=0.103 Sum_probs=40.8
Q ss_pred CCceEEEEecCC--------CchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHHHhcCcEEEe
Q psy9726 70 EGRTKCTLIPGD--------GVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSIARNGICLKG 136 (381)
Q Consensus 70 ~~~~~IavipGD--------GIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i~~~daiL~G 136 (381)
....+|.+|-|. +.-..+.+++.+.++..+.+++.. ++.. ..+.++..+.++++|+++++
T Consensus 23 ~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~--dL~~-----~~Dv~~~~~~l~~aD~iv~~ 90 (218)
T 3rpe_A 23 NAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKIT--TVDQ-----GYDIESEIENYLWADTIIYQ 90 (218)
T ss_dssp -CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEE--EGGG-----CCCHHHHHHHHHHCSEEEEE
T ss_pred ccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEEEE--ECCC-----ccCHHHHHHHHHhCCEEEEE
Confidence 334577777765 244677788888888777666654 4432 12367788999999999986
No 116
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=22.67 E-value=2e+02 Score=25.19 Aligned_cols=72 Identities=10% Similarity=0.024 Sum_probs=35.3
Q ss_pred HHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeE-------EeHH---HHHHHHHhCCCCccEE
Q psy9726 222 AKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQ-------MIVD---NCTMQIVSNPHQFDVM 291 (381)
Q Consensus 222 ar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~-------~~vD---~~~~~lv~~P~~fdVi 291 (381)
.+.|.++..++|.++|-++.-..-... .....+-|.+..+++ +++++. ...+ .++.+++.....+|.|
T Consensus 127 ~~~a~~~l~~~G~~~I~~i~~~~~~~~-~~~R~~gf~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai 204 (296)
T 3brq_A 127 SFNAVAELINAGHQEIAFLTGSMDSPT-SIERLAGYKDALAQH-GIALNEKLIANGKWTPASGAEGVEMLLERGAKFSAL 204 (296)
T ss_dssp HHHHHHHHHHTTCCSEEEECCCTTCHH-HHHHHHHHHHHHHTT-TCCCCGGGEECCCSSHHHHHHHHHHHHTC--CCSEE
T ss_pred HHHHHHHHHHCCCceEEEEcCCCCCcc-HHHHHHHHHHHHHHc-CCCCChhhEEeCCCChhHHHHHHHHHHhCCCCCCEE
Confidence 344555555567778877753321111 122333445444443 222111 1122 3455677766779999
Q ss_pred EcCC
Q psy9726 292 VMPN 295 (381)
Q Consensus 292 vt~N 295 (381)
+|.|
T Consensus 205 ~~~~ 208 (296)
T 3brq_A 205 VASN 208 (296)
T ss_dssp EESS
T ss_pred EECC
Confidence 9987
No 117
>3cfx_A UPF0100 protein MA_0280; ABC transporter, binding protein, molybdate, tungstate, LIGA unknown function, transport protein; 1.60A {Methanosarcina acetivorans}
Probab=22.47 E-value=1.7e+02 Score=26.34 Aligned_cols=47 Identities=13% Similarity=0.106 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhhCCCeEEeEEe--HHHHHHHHHhCCCCccEEEcCCcc
Q psy9726 251 GLFLNSCKEMAKLYPKIQFEQMI--VDNCTMQIVSNPHQFDVMVMPNLY 297 (381)
Q Consensus 251 glf~~~~~eva~eypdI~~~~~~--vD~~~~~lv~~P~~fdVivt~Nl~ 297 (381)
..+.++.++..++||+|+++... -..+..+|...-..+||+++.+..
T Consensus 17 ~~~~~l~~~F~~~~~gi~V~~~~~~s~~l~~~i~~~g~~~Dv~~~a~~~ 65 (296)
T 3cfx_A 17 VPFEELEAEFEAQHPGVDVQREAAGSAQSVRKITELGKKADVLASADYA 65 (296)
T ss_dssp HHHHHHHHHHHHHSTTCEEEEEECCHHHHHHHHHTSCCCCSEEEESSTT
T ss_pred HHHHHHHHHHHHHCCCceEEEEeCchHHHHHHHHhCCCCCcEEEECChh
Confidence 46777887777889998888766 345667776523469999887653
No 118
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=22.38 E-value=2.2e+02 Score=24.81 Aligned_cols=74 Identities=12% Similarity=-0.102 Sum_probs=37.6
Q ss_pred HHHHHHHHHhC-C-CCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEe----HH---HHHHHHHhCCCCccEEE
Q psy9726 222 AKFAFDYATKN-N-RKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMI----VD---NCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 222 ar~AFe~A~~r-~-~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~----vD---~~~~~lv~~P~~fdViv 292 (381)
.+.|.++..++ | .++|-++.-..-.. +.....+-+.+..++++....+... .+ .++.++++....+|.|+
T Consensus 117 g~~~~~~L~~~~G~~~~i~~i~~~~~~~-~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~ 195 (289)
T 3brs_A 117 GIRIGAVTKNLVRKSGKIGVISFVKNSK-TAMDREEGLKIGLSDDSNKIEAIYYCDSNYDKAYDGTVELLTKYPDISVMV 195 (289)
T ss_dssp HHHHHHHHHHHTSSSCEEEEEESCTTSH-HHHHHHHHHHHHHGGGGGGEEEEEECTTCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHHHcCCCceEEEEECCCCCc-cHHHHHHHHHHHHHhCCCcEEeeecCCCCHHHHHHHHHHHHHhCCCceEEE
Confidence 34444544443 4 67787775321111 1223445566666666643112121 12 23455666555799999
Q ss_pred cCCc
Q psy9726 293 MPNL 296 (381)
Q Consensus 293 t~Nl 296 (381)
|.|=
T Consensus 196 ~~~d 199 (289)
T 3brs_A 196 GLNQ 199 (289)
T ss_dssp ESSH
T ss_pred ECCC
Confidence 9873
No 119
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=22.09 E-value=2.7e+02 Score=23.05 Aligned_cols=63 Identities=14% Similarity=0.079 Sum_probs=46.6
Q ss_pred EeeeeeecHHHHHHHHHHHHHHHHhCCCCcEEEEE-cCCccccccHHHHHHHHHHHhhCCCeEE
Q psy9726 207 VECLKIVTAEKSRRIAKFAFDYATKNNRKKVTAVH-KANIMKLGDGLFLNSCKEMAKLYPKIQF 269 (381)
Q Consensus 207 a~~~~~~Tr~~~eRiar~AFe~A~~r~~k~Vt~v~-KaNv~~~tdglf~~~~~eva~eypdI~~ 269 (381)
-+++.=.|.+++.+.+...++.|..++.+.|.++| |.+-.+...+.-++.+.++-++.|.|..
T Consensus 49 ~LDLHG~~~~EA~~~L~~fL~~a~~~g~r~V~IIHGKG~gs~~~~~vLk~~V~~wL~~~~~V~~ 112 (137)
T 3qd7_X 49 SLNLLRQPVEECRKMVFSFIQQALADGLRNVLIIHGKGRDDKSHANIVRSYVARWLTEFDDVQA 112 (137)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHHTTCSEEEEECCCCSSTTSHHHHHHHHHHHHHHTSTTEEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCchHHHHHHHHHHHhcCCceeE
Confidence 46777889999999999999999988888899998 3432221123677777777777887753
No 120
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=21.46 E-value=4e+02 Score=23.07 Aligned_cols=71 Identities=14% Similarity=0.016 Sum_probs=36.4
Q ss_pred HHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEE----eHH---HHHHHHHhC-CCCccEEEcC
Q psy9726 223 KFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQM----IVD---NCTMQIVSN-PHQFDVMVMP 294 (381)
Q Consensus 223 r~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~----~vD---~~~~~lv~~-P~~fdVivt~ 294 (381)
+.|.++..++|.++|-++.-..-... .....+-+.+..+++. ++++.. ..+ .++.++++. ...+|.|+|.
T Consensus 107 ~~a~~~L~~~G~~~i~~i~~~~~~~~-~~~R~~gf~~~l~~~g-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ai~~~ 184 (277)
T 3cs3_A 107 TQAIEQFVNVGSKKVLLLSGPEKGYD-SQERLAVSTRELTRFG-IPYEIIQGDFTEPSGYAAAKKILSQPQTEPVDVFAF 184 (277)
T ss_dssp HHHHHHHHHTTCSCEEEEECCTTSHH-HHHHHHHHHHHHHHTT-CCEEEEECCSSHHHHHHHHHHHTTSCCCSSEEEEES
T ss_pred HHHHHHHHHcCCceEEEEeCCccCcc-HHHHHHHHHHHHHHcC-CCeeEEeCCCChhHHHHHHHHHHhcCCCCCcEEEEc
Confidence 34445555557778877753321111 1223344555444442 333211 112 345567776 6789999998
Q ss_pred C
Q psy9726 295 N 295 (381)
Q Consensus 295 N 295 (381)
|
T Consensus 185 ~ 185 (277)
T 3cs3_A 185 N 185 (277)
T ss_dssp S
T ss_pred C
Confidence 7
No 121
>3cij_A UPF0100 protein AF_0094; archaeal periplasmic binding protein, unknown function, metal binding protein, transport protein; 1.07A {Archaeoglobus fulgidus} PDB: 2ons_A 2onk_E 2onr_A
Probab=21.36 E-value=1.9e+02 Score=25.96 Aligned_cols=46 Identities=7% Similarity=0.090 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHhhCCCeEEeEEe--HHHHHHHHHhCCCCccEEEcCCc
Q psy9726 251 GLFLNSCKEMAKLYPKIQFEQMI--VDNCTMQIVSNPHQFDVMVMPNL 296 (381)
Q Consensus 251 glf~~~~~eva~eypdI~~~~~~--vD~~~~~lv~~P~~fdVivt~Nl 296 (381)
..+.++.++..++||+|+++... -..+..+|...-..+||++..+.
T Consensus 17 ~~~~~l~~~F~~~~~gi~V~~~~~~s~~l~~~i~~~g~~~Dv~~~a~~ 64 (295)
T 3cij_A 17 EPMKAFKRAFEEKHPNVEVQTEAAGSAATIRKVTELGRKADVIATADY 64 (295)
T ss_dssp HHHHHHHHHHHHHCTTCEEEEEEECHHHHHHHHHTSCCCCSEEEESST
T ss_pred HHHHHHHHHHHHHCCCceEEEEeCcHHHHHHHHHhCCCCCCEEEEcCh
Confidence 46777777777889998887665 35566666652335999998765
No 122
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=21.35 E-value=3.3e+02 Score=25.25 Aligned_cols=82 Identities=9% Similarity=0.040 Sum_probs=54.1
Q ss_pred CceEEEEecCC----CchhHHHHHHHHHHHHcCCCcceEEEecccccCCC----CCC--hHHHHHHHHhcCcEEEecccC
Q psy9726 71 GRTKCTLIPGD----GVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTM----SAP--LETVADSIARNGICLKGVLST 140 (381)
Q Consensus 71 ~~~~IavipGD----GIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~----~~~--~~etl~~i~~~daiL~G~v~~ 140 (381)
...+|.+|-|- |....+++++.+.++..+. +.+.+++....... ... ..+..+.++++|+++++ +
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~--eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~a---S 131 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFFGA--ETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWC---S 131 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTC--EEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEE---E
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCC--EEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEE---c
Confidence 45789999886 7788888888888887664 45555665432111 111 36678999999999985 4
Q ss_pred CCCCCCcccchhhHHHHHhhcc
Q psy9726 141 PDYSHTGELQTLNMKLRKALDL 162 (381)
Q Consensus 141 p~~~~~~~~~s~~~~LR~~ldl 162 (381)
|.| +.+.-..|..-+|.
T Consensus 132 P~Y-----n~sipg~LKn~IDr 148 (279)
T 2fzv_A 132 PER-----HGQITSVMKAQIDH 148 (279)
T ss_dssp EEE-----TTEECHHHHHHHHH
T ss_pred Ccc-----ccCcCHHHHHHHHH
Confidence 654 22344566777774
No 123
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=21.17 E-value=3.6e+02 Score=23.41 Aligned_cols=74 Identities=8% Similarity=0.051 Sum_probs=38.5
Q ss_pred HHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCC-CeE-----EeEEeH---HHHHHHHHhCCCCccEEE
Q psy9726 222 AKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYP-KIQ-----FEQMIV---DNCTMQIVSNPHQFDVMV 292 (381)
Q Consensus 222 ar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eyp-dI~-----~~~~~v---D~~~~~lv~~P~~fdViv 292 (381)
.+.|.++..++|.++|-++.-..-... .....+-|.+..+++. .+. ...... -.++.++++....+|.|+
T Consensus 119 g~~a~~~L~~~G~~~i~~i~~~~~~~~-~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~ 197 (292)
T 3k4h_A 119 AREVAEYLISLGHKQIAFIGGGSDLLV-TRDRLAGMSDALKLADIVLPKEYILHFDFSRESGQQAVEELMGLQQPPTAIM 197 (292)
T ss_dssp HHHHHHHHHHTTCCCEEEEESCTTBHH-HHHHHHHHHHHHHHTTCCCCGGGEEECCSSHHHHHHHHHHHHTSSSCCSEEE
T ss_pred HHHHHHHHHHCCCceEEEEeCcccchh-HHHHHHHHHHHHHHcCCCCChheEEecCCCHHHHHHHHHHHHcCCCCCcEEE
Confidence 444555555667778888764322221 1233344444444431 111 111111 234567777777899999
Q ss_pred cCCc
Q psy9726 293 MPNL 296 (381)
Q Consensus 293 t~Nl 296 (381)
|.|-
T Consensus 198 ~~~d 201 (292)
T 3k4h_A 198 ATDD 201 (292)
T ss_dssp ESSH
T ss_pred EcCh
Confidence 9873
No 124
>3uor_A ABC transporter sugar binding protein; ALFA/beta protein, periplasmic-binding protein, maltose, SUG binding protein; 2.20A {Xanthomonas axonopodis PV}
Probab=21.13 E-value=1.4e+02 Score=28.82 Aligned_cols=58 Identities=12% Similarity=0.123 Sum_probs=38.4
Q ss_pred CCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEeHH--HHHHHH---HhCCCCccEEEcCC
Q psy9726 234 RKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMIVD--NCTMQI---VSNPHQFDVMVMPN 295 (381)
Q Consensus 234 ~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~vD--~~~~~l---v~~P~~fdVivt~N 295 (381)
+..||+-+-.+ ....+.+++++..++||+|+++...++ ....+| +..-..+||+...+
T Consensus 29 ~~tlt~w~~~~----~~~~~~~~~~~F~~~~pgi~V~~~~~~~~~~~~kl~~~~~sg~~pDv~~~~~ 91 (458)
T 3uor_A 29 KTTVRFWAMGK----EAEVVAELVADFEKQNPTIHVDVQNIPMTAAHEKLLTAFAADGLPDVCQLGN 91 (458)
T ss_dssp CEEEEEEECTH----HHHHHHHHHHHHHTTCTTEEEEEEECCHHHHHHHHHHHHHTTCCCSEEEEET
T ss_pred CeEEEEEecCC----cHHHHHHHHHHHHHHCCCcEEEEEEcChHHHHHHHHHHHhCCCCCCEEEECc
Confidence 45677765322 235788888888899999999888763 333333 23445799888765
No 125
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=20.81 E-value=4.4e+02 Score=23.29 Aligned_cols=62 Identities=5% Similarity=-0.121 Sum_probs=33.7
Q ss_pred ceEEEEecCC---CchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHH--HhcCcEEEeccc
Q psy9726 72 RTKCTLIPGD---GVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSI--ARNGICLKGVLS 139 (381)
Q Consensus 72 ~~~IavipGD---GIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i--~~~daiL~G~v~ 139 (381)
+++|+++--+ ---.++...+.+.++..|..+.+.. .... .....+.++.+ ++.|+++..|..
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~--~~~~----~~~~~~~i~~l~~~~vdgiIi~~~~ 68 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGAKVFVQS--ANGN----EETQMSQIENMINRGVDVLVIIPYN 68 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSCEEEEEE--CTTC----HHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCCEEEEEC--CCCC----HHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 4567766543 3456777777777777775554432 1110 00012344444 468888887764
No 126
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=20.63 E-value=2.1e+02 Score=24.71 Aligned_cols=83 Identities=16% Similarity=0.235 Sum_probs=51.5
Q ss_pred ceEEEEecC----CCchhHHHHHHHH----HHHHcCCCcceEEEecccccC---CC--CC--C--hHHHHHHHHhcCcEE
Q psy9726 72 RTKCTLIPG----DGVGPELVYSVQE----VFKAANVPVDFEPFFFSEVNP---TM--SA--P--LETVADSIARNGICL 134 (381)
Q Consensus 72 ~~~IavipG----DGIGpEV~~aa~~----VL~a~~~~i~~~~~~~g~~~~---~~--~~--~--~~etl~~i~~~daiL 134 (381)
..+|.+|-| ++....+.+++.+ .+++.+..++.+.+++..... +. .+ . .++..+.++++|+++
T Consensus 11 ~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~AD~iv 90 (191)
T 3k1y_A 11 MRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSASDGLV 90 (191)
T ss_dssp SEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHHCSEEE
T ss_pred hceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHHCCEEE
Confidence 356777766 4667777777777 455554456666677764331 11 11 1 367899999999999
Q ss_pred EecccCCCCCCCcccchhhHHHHHhhcc
Q psy9726 135 KGVLSTPDYSHTGELQTLNMKLRKALDL 162 (381)
Q Consensus 135 ~G~v~~p~~~~~~~~~s~~~~LR~~ldl 162 (381)
+| +|.| +.+....|..-+|.
T Consensus 91 i~---sP~Y-----~~~~~~~lK~~iD~ 110 (191)
T 3k1y_A 91 VA---TPVF-----KASYTGLFKMFFDI 110 (191)
T ss_dssp EE---EECB-----TTBSCHHHHHHHHH
T ss_pred EE---cCcc-----CCcCcHHHHHHHHH
Confidence 85 4654 12344566777774
No 127
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=20.28 E-value=2.9e+02 Score=21.51 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=36.5
Q ss_pred ceEEEEecCCCchhHHHHH--HHHHHHHcCCC-cceEEEecccccCCCCCChHHHHHHHHhcCcEEEec
Q psy9726 72 RTKCTLIPGDGVGPELVYS--VQEVFKAANVP-VDFEPFFFSEVNPTMSAPLETVADSIARNGICLKGV 137 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~a--a~~VL~a~~~~-i~~~~~~~g~~~~~~~~~~~etl~~i~~~daiL~G~ 137 (381)
..+|.+..|.|+|-..+-+ .++.++..+++ ++.....+.. .-+.+.++|.++.+|
T Consensus 18 ~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~-----------~~~~~~~~DlIi~t~ 75 (110)
T 3czc_A 18 MVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGE-----------AKGLASNYDIVVASN 75 (110)
T ss_dssp CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHH-----------HHHHGGGCSEEEEET
T ss_pred CcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHH-----------HhhccCCCcEEEECC
Confidence 4689999999999876654 44666666766 5555444432 222346789888765
No 128
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=20.21 E-value=2.3e+02 Score=25.06 Aligned_cols=73 Identities=12% Similarity=0.042 Sum_probs=39.9
Q ss_pred HHHHHHHHhC--CCCcEEEEEcCCccccccHHHHHHHHHHH-hhCCCeEEeEEe-----HH---HHHHHHHhCCCCccEE
Q psy9726 223 KFAFDYATKN--NRKKVTAVHKANIMKLGDGLFLNSCKEMA-KLYPKIQFEQMI-----VD---NCTMQIVSNPHQFDVM 291 (381)
Q Consensus 223 r~AFe~A~~r--~~k~Vt~v~KaNv~~~tdglf~~~~~eva-~eypdI~~~~~~-----vD---~~~~~lv~~P~~fdVi 291 (381)
+.|.++..++ |.++|-++.-... .+.....+-+++.. +.+++++..... .+ .++.++++....+|.|
T Consensus 114 ~~~~~~l~~~~~g~~~i~~i~~~~~--~~~~~R~~gf~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai 191 (305)
T 3g1w_A 114 MNAAYKMAELLDGEGEVAVITLPNQ--LNHQERTTGFKETLEAEFPAIEVIAVEDGRGDSLHSRRVAHQLLEDYPNLAGI 191 (305)
T ss_dssp HHHHHHHHHHTTTCEEEEEEECTTC--HHHHHHHHHHHHHHHHHCTTEEEEEEEECTTCHHHHHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCc--ccHHHHHHHHHHHHHhhCCCCEEEEEecCCCCHHHHHHHHHHHHHhCCCceEE
Confidence 3444444444 6678888874322 12233444455543 456776654432 11 2345566555579999
Q ss_pred EcCCcc
Q psy9726 292 VMPNLY 297 (381)
Q Consensus 292 vt~Nl~ 297 (381)
+|.|=.
T Consensus 192 ~~~~d~ 197 (305)
T 3g1w_A 192 FATEAN 197 (305)
T ss_dssp EESSHH
T ss_pred EECCCc
Confidence 998743
No 129
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=20.18 E-value=2.1e+02 Score=25.17 Aligned_cols=73 Identities=8% Similarity=0.073 Sum_probs=40.1
Q ss_pred HHHHHHHHHHhCCCCcEEEEEcCCccccccHHHHHHHHHHHhhCCCeEEeEEe----------HHHHHHHHHhCCCCccE
Q psy9726 221 IAKFAFDYATKNNRKKVTAVHKANIMKLGDGLFLNSCKEMAKLYPKIQFEQMI----------VDNCTMQIVSNPHQFDV 290 (381)
Q Consensus 221 iar~AFe~A~~r~~k~Vt~v~KaNv~~~tdglf~~~~~eva~eypdI~~~~~~----------vD~~~~~lv~~P~~fdV 290 (381)
..+.|.++-.++|.+++-++.-..-... .....+-+.+..+++ ++.++... .-.++.++++....+|.
T Consensus 114 ~g~~a~~~L~~~G~~~I~~i~~~~~~~~-~~~R~~gf~~~l~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a 191 (288)
T 3gv0_A 114 YAYEAVERLAQCGRKRIAVIVPPSRFSF-HDHARKGFNRGIRDF-GLTEFPIDAVTIETPLEKIRDFGQRLMQSSDRPDG 191 (288)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCTTSHH-HHHHHHHHHHHHHHT-TCEECCCCSCCTTSCHHHHHHHHHHHTTSSSCCSE
T ss_pred HHHHHHHHHHHCCCCeEEEEcCCcccch-HHHHHHHHHHHHHHc-CCCcchhheeccccchHHHHHHHHHHHhCCCCCcE
Confidence 3455666666677888888753322211 122334455544444 22222211 11456677777778999
Q ss_pred EEcCC
Q psy9726 291 MVMPN 295 (381)
Q Consensus 291 ivt~N 295 (381)
|+|.|
T Consensus 192 i~~~~ 196 (288)
T 3gv0_A 192 IVSIS 196 (288)
T ss_dssp EEESC
T ss_pred EEEcC
Confidence 99988
No 130
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=20.15 E-value=2.7e+02 Score=24.32 Aligned_cols=62 Identities=11% Similarity=0.169 Sum_probs=41.7
Q ss_pred ceEEEEecCCCchhHHHHHHHHHHHHcCCCcceEEEecccccCCCCCChHHHHHHH-----HhcCcEEEecccC
Q psy9726 72 RTKCTLIPGDGVGPELVYSVQEVFKAANVPVDFEPFFFSEVNPTMSAPLETVADSI-----ARNGICLKGVLST 140 (381)
Q Consensus 72 ~~~IavipGDGIGpEV~~aa~~VL~a~~~~i~~~~~~~g~~~~~~~~~~~etl~~i-----~~~daiL~G~v~~ 140 (381)
+.+|++|-|---=-++++++.++|+.+|+++|.. -... |-.|++..+-+ +.+++++-++=+.
T Consensus 7 ~~~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~-----V~Sa--HR~p~~~~~~~~~a~~~g~~ViIa~AG~a 73 (174)
T 3lp6_A 7 RPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVR-----VVSA--HRTPEAMFSYARGAAARGLEVIIAGAGGA 73 (174)
T ss_dssp CCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEE-----ECCT--TTCHHHHHHHHHHHHHHTCCEEEEEEESS
T ss_pred CCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEE-----EECC--CCCHHHHHHHHHHHHhCCCCEEEEecCch
Confidence 4579999998877899999999999998774332 2221 22343333332 4578888887654
Done!